locus-tag class description AVL56_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AVL56_RS00005 PF11638 DnaA N-terminal domain AVL56_RS00005 PF00308 Bacterial dnaA protein AVL56_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AVL56_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AVL56_RS00010 PF02767 DNA polymerase III beta subunit, central domain AVL56_RS00015 PF02463 RecF/RecN/SMC N terminal domain AVL56_RS00020 PF00204 DNA gyrase B AVL56_RS00020 PF18053 DNA gyrase B subunit insert domain AVL56_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus AVL56_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS00020 PF01751 Toprim domain AVL56_RS00035 PF02092 Glycyl-tRNA synthetase beta subunit AVL56_RS00035 PF05746 DALR anticodon binding domain AVL56_RS00040 PF02091 Glycyl-tRNA synthetase alpha subunit AVL56_RS00045 PF03352 Methyladenine glycosylase AVL56_RS00055 PF04220 Der GTPase activator (YihI) AVL56_RS00060 PF00034 Cytochrome c AVL56_RS00065 PF01926 50S ribosome-binding GTPase AVL56_RS00070 PF00476 DNA polymerase family A AVL56_RS00070 PF01612 3'-5' exonuclease AVL56_RS00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVL56_RS00070 PF01367 5'-3' exonuclease, C-terminal SAM fold AVL56_RS00080 PF02386 Cation transport protein AVL56_RS00085 PF02080 TrkA-C domain AVL56_RS00085 PF02254 TrkA-N domain AVL56_RS00090 PF01189 16S rRNA methyltransferase RsmB/F AVL56_RS00090 PF01029 NusB family AVL56_RS00095 PF00551 Formyl transferase AVL56_RS00095 PF02911 Formyl transferase, C-terminal domain AVL56_RS00100 PF01327 Polypeptide deformylase AVL56_RS00110 PF17782 DprA winged helix domain AVL56_RS00110 PF02481 DNA recombination-mediator protein A AVL56_RS00115 PF04361 Protein of unknown function (DUF494) AVL56_RS00125 PF01300 Telomere recombination AVL56_RS00130 PF01218 Coproporphyrinogen III oxidase AVL56_RS00135 PF03922 OmpW family AVL56_RS00140 PF01152 Bacterial-like globin AVL56_RS00145 PF08501 Shikimate dehydrogenase substrate binding domain AVL56_RS00145 PF01488 Shikimate / quinate 5-dehydrogenase AVL56_RS00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVL56_RS00150 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS00190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVL56_RS00190 PF14579 Helix-hairpin-helix motif AVL56_RS00190 PF02811 PHP domain AVL56_RS00190 PF01336 OB-fold nucleic acid binding domain AVL56_RS00190 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVL56_RS00200 PF00154 recA bacterial DNA recombination protein AVL56_RS00220 PF04389 Peptidase family M28 AVL56_RS00220 PF02225 PA domain AVL56_RS00230 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS00235 PF02441 Flavoprotein AVL56_RS00235 PF04127 DNA / pantothenate metabolism flavoprotein AVL56_RS00240 PF04002 RadC-like JAB domain AVL56_RS00260 PF06082 Exopolysaccharide biosynthesis protein YbjH AVL56_RS00265 PF01467 Cytidylyltransferase-like AVL56_RS00270 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVL56_RS00275 PF00830 Ribosomal L28 family AVL56_RS00280 PF00471 Ribosomal protein L33 AVL56_RS00290 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVL56_RS00290 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVL56_RS00290 PF06827 Zinc finger found in FPG and IleRS AVL56_RS00295 PF01467 Cytidylyltransferase-like AVL56_RS00305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVL56_RS00320 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS00320 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS00320 PF00563 EAL domain AVL56_RS00325 PF00155 Aminotransferase class I and II AVL56_RS00330 PF00107 Zinc-binding dehydrogenase AVL56_RS00330 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS00335 PF00581 Rhodanese-like domain AVL56_RS00340 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AVL56_RS00340 PF01694 Rhomboid family AVL56_RS00350 PF04345 Chorismate lyase AVL56_RS00355 PF01040 UbiA prenyltransferase family AVL56_RS00360 PF04380 Membrane fusogenic activity AVL56_RS00365 PF00580 UvrD/REP helicase N-terminal domain AVL56_RS00365 PF13361 UvrD-like helicase C-terminal domain AVL56_RS00370 PF00563 EAL domain AVL56_RS00370 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS00370 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS00375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVL56_RS00390 PF02463 RecF/RecN/SMC N terminal domain AVL56_RS00395 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AVL56_RS00400 PF05840 Bacteriophage replication gene A protein (GPA) AVL56_RS00430 PF00589 Phage integrase family AVL56_RS00435 PF03553 Na+/H+ antiporter family AVL56_RS00450 PF01131 DNA topoisomerase AVL56_RS00450 PF01751 Toprim domain AVL56_RS00450 PF01396 Topoisomerase DNA binding C4 zinc finger AVL56_RS00460 PF02652 L-lactate permease AVL56_RS00470 PF01012 Electron transfer flavoprotein domain AVL56_RS00470 PF00766 Electron transfer flavoprotein FAD-binding domain AVL56_RS00475 PF02754 Cysteine-rich domain AVL56_RS00475 PF13183 4Fe-4S dicluster domain AVL56_RS00480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL56_RS00495 PF01965 DJ-1/PfpI family AVL56_RS00495 PF12833 Helix-turn-helix domain AVL56_RS00500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVL56_RS00500 PF00355 Rieske [2Fe-2S] domain AVL56_RS00510 PF00970 Oxidoreductase FAD-binding domain AVL56_RS00510 PF00042 Globin AVL56_RS00510 PF00175 Oxidoreductase NAD-binding domain AVL56_RS00515 PF00464 Serine hydroxymethyltransferase AVL56_RS00520 PF01266 FAD dependent oxidoreductase AVL56_RS00525 PF04267 Sarcosine oxidase, delta subunit family AVL56_RS00530 PF17806 Sarcosine oxidase A3 domain AVL56_RS00530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS00530 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVL56_RS00530 PF01571 Aminomethyltransferase folate-binding domain AVL56_RS00540 PF00551 Formyl transferase AVL56_RS00550 PF02028 BCCT, betaine/carnitine/choline family transporter AVL56_RS00555 PF03315 Serine dehydratase beta chain AVL56_RS00555 PF03313 Serine dehydratase alpha chain AVL56_RS00560 PF03466 LysR substrate binding domain AVL56_RS00560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS00575 PF00171 Aldehyde dehydrogenase family AVL56_RS00580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL56_RS00580 PF13378 Enolase C-terminal domain-like AVL56_RS00585 PF05199 GMC oxidoreductase AVL56_RS00585 PF00732 GMC oxidoreductase AVL56_RS00590 PF00171 Aldehyde dehydrogenase family AVL56_RS00595 PF00593 TonB dependent receptor AVL56_RS00595 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS00600 PF13181 Tetratricopeptide repeat AVL56_RS00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS00605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL56_RS00605 PF00672 HAMP domain AVL56_RS00605 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS00605 PF01627 Hpt domain AVL56_RS00605 PF00072 Response regulator receiver domain AVL56_RS00610 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS00610 PF00593 TonB dependent receptor AVL56_RS00615 PF03466 LysR substrate binding domain AVL56_RS00615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS00620 PF00171 Aldehyde dehydrogenase family AVL56_RS00625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL56_RS00625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVL56_RS00630 PF13533 Biotin-lipoyl like AVL56_RS00635 PF00005 ABC transporter AVL56_RS00650 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS00650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS00650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS00655 PF03466 LysR substrate binding domain AVL56_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS00660 PF00753 Metallo-beta-lactamase superfamily AVL56_RS00665 PF02627 Carboxymuconolactone decarboxylase family AVL56_RS00670 PF04317 YcjX-like family, DUF463 AVL56_RS00690 PF06968 Biotin and Thiamin Synthesis associated domain AVL56_RS00690 PF04055 Radical SAM superfamily AVL56_RS00695 PF05690 Thiazole biosynthesis protein ThiG AVL56_RS00705 PF00899 ThiF family AVL56_RS00710 PF02581 Thiamine monophosphate synthase AVL56_RS00715 PF13667 ThiC-associated domain AVL56_RS00715 PF01964 Radical SAM ThiC family AVL56_RS00720 PF00593 TonB dependent receptor AVL56_RS00720 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS00725 PF00296 Luciferase-like monooxygenase AVL56_RS00735 PF00881 Nitroreductase family AVL56_RS00735 PF01996 F420-0:Gamma-glutamyl ligase AVL56_RS00740 PF01983 Guanylyl transferase CofC like AVL56_RS00745 PF01933 Uncharacterised protein family UPF0052 AVL56_RS00750 PF04055 Radical SAM superfamily AVL56_RS00755 PF04055 Radical SAM superfamily AVL56_RS00760 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS00760 PF08362 YcdC-like protein, C-terminal region AVL56_RS00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS00765 PF03466 LysR substrate binding domain AVL56_RS00770 PF00202 Aminotransferase class-III AVL56_RS00775 PF00171 Aldehyde dehydrogenase family AVL56_RS00780 PF01546 Peptidase family M20/M25/M40 AVL56_RS00780 PF07687 Peptidase dimerisation domain AVL56_RS00785 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AVL56_RS00790 PF01979 Amidohydrolase family AVL56_RS00795 PF07219 HemY protein N-terminus AVL56_RS00795 PF07719 Tetratricopeptide repeat AVL56_RS00800 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AVL56_RS00810 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVL56_RS00810 PF03900 Porphobilinogen deaminase, C-terminal domain AVL56_RS00815 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS00815 PF00072 Response regulator receiver domain AVL56_RS00825 PF00625 Guanylate kinase AVL56_RS00830 PF01192 RNA polymerase Rpb6 AVL56_RS00835 PF13291 ACT domain AVL56_RS00835 PF02824 TGS domain AVL56_RS00835 PF04607 Region found in RelA / SpoT proteins AVL56_RS00840 PF01042 Endoribonuclease L-PSP AVL56_RS00845 PF12105 SpoU, rRNA methylase, C-terminal AVL56_RS00845 PF00588 SpoU rRNA Methylase family AVL56_RS00850 PF17191 RecG wedge domain AVL56_RS00850 PF00271 Helicase conserved C-terminal domain AVL56_RS00850 PF00270 DEAD/DEAH box helicase AVL56_RS00855 PF04445 Putative SAM-dependent methyltransferase AVL56_RS00860 PF08534 Redoxin AVL56_RS00860 PF00462 Glutaredoxin AVL56_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS00885 PF08402 TOBE domain AVL56_RS00885 PF00005 ABC transporter AVL56_RS00890 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS00890 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS00890 PF00563 EAL domain AVL56_RS00905 PF00924 Mechanosensitive ion channel AVL56_RS00905 PF05552 Conserved TM helix AVL56_RS00930 PF05231 MASE1 AVL56_RS00930 PF13426 PAS domain AVL56_RS00930 PF00563 EAL domain AVL56_RS00930 PF08447 PAS fold AVL56_RS00930 PF08448 PAS fold AVL56_RS00930 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS00940 PF03466 LysR substrate binding domain AVL56_RS00945 PF01810 LysE type translocator AVL56_RS00950 PF00893 Small Multidrug Resistance protein AVL56_RS00965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS00965 PF00529 HlyD membrane-fusion protein of T1SS AVL56_RS00970 PF00873 AcrB/AcrD/AcrF family AVL56_RS00980 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVL56_RS00980 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVL56_RS00985 PF00850 Histone deacetylase domain AVL56_RS00995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS00995 PF12729 Four helix bundle sensory module for signal transduction AVL56_RS00995 PF00672 HAMP domain AVL56_RS01000 PF01544 CorA-like Mg2+ transporter protein AVL56_RS01005 PF11737 Protein of unknown function (DUF3300) AVL56_RS01010 PF00925 GTP cyclohydrolase II AVL56_RS01015 PF08448 PAS fold AVL56_RS01015 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS01015 PF00563 EAL domain AVL56_RS01025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVL56_RS01035 PF09382 RQC domain AVL56_RS01035 PF16124 RecQ zinc-binding AVL56_RS01035 PF00270 DEAD/DEAH box helicase AVL56_RS01035 PF00271 Helicase conserved C-terminal domain AVL56_RS01035 PF00570 HRDC domain AVL56_RS01040 PF03061 Thioesterase superfamily AVL56_RS01045 PF00571 CBS domain AVL56_RS01045 PF01769 Divalent cation transporter AVL56_RS01045 PF03448 MgtE intracellular N domain AVL56_RS01050 PF00892 EamA-like transporter family AVL56_RS01055 PF00072 Response regulator receiver domain AVL56_RS01055 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS01060 PF13361 UvrD-like helicase C-terminal domain AVL56_RS01060 PF00580 UvrD/REP helicase N-terminal domain AVL56_RS01065 PF06426 Serine acetyltransferase, N-terminal AVL56_RS01065 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS01070 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS01075 PF00589 Phage integrase family AVL56_RS01075 PF02899 Phage integrase, N-terminal SAM-like domain AVL56_RS01085 PF01678 Diaminopimelate epimerase AVL56_RS01090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVL56_RS01090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVL56_RS01105 PF01569 PAP2 superfamily AVL56_RS01110 PF03737 Aldolase/RraA AVL56_RS01120 PF02441 Flavoprotein AVL56_RS01125 PF01225 Mur ligase family, catalytic domain AVL56_RS01125 PF02875 Mur ligase family, glutamate ligase domain AVL56_RS01125 PF08245 Mur ligase middle domain AVL56_RS01130 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AVL56_RS01135 PF00719 Inorganic pyrophosphatase AVL56_RS01160 PF17760 UvrA interaction domain AVL56_RS01160 PF17755 UvrA DNA-binding domain AVL56_RS01160 PF00005 ABC transporter AVL56_RS01165 PF07690 Major Facilitator Superfamily AVL56_RS01170 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS01180 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS01190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AVL56_RS01190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AVL56_RS01195 PF10509 Galactokinase galactose-binding signature AVL56_RS01195 PF08544 GHMP kinases C terminal AVL56_RS01195 PF00288 GHMP kinases N terminal domain AVL56_RS01200 PF00474 Sodium:solute symporter family AVL56_RS01205 PF00436 Single-strand binding protein family AVL56_RS01220 PF00072 Response regulator receiver domain AVL56_RS01220 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS01225 PF00072 Response regulator receiver domain AVL56_RS01225 PF09456 RcsC Alpha-Beta-Loop (ABL) AVL56_RS01225 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS01230 PF00563 EAL domain AVL56_RS01230 PF08668 HDOD domain AVL56_RS01255 PF16874 Glycosyl hydrolase family 36 C-terminal domain AVL56_RS01255 PF16875 Glycosyl hydrolase family 36 N-terminal domain AVL56_RS01260 PF00474 Sodium:solute symporter family AVL56_RS01270 PF04820 Tryptophan halogenase AVL56_RS01280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVL56_RS01280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVL56_RS01285 PF08220 DeoR-like helix-turn-helix domain AVL56_RS01285 PF00455 DeoR C terminal sensor domain AVL56_RS01290 PF01266 FAD dependent oxidoreductase AVL56_RS01290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVL56_RS01320 PF00263 Bacterial type II and III secretion system protein AVL56_RS01320 PF03958 Bacterial type II/III secretion system short domain AVL56_RS01325 PF01471 Putative peptidoglycan binding domain AVL56_RS01325 PF13401 AAA domain AVL56_RS01335 PF00437 Type II/IV secretion system protein AVL56_RS01335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVL56_RS01340 PF00482 Type II secretion system (T2SS), protein F AVL56_RS01350 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS01355 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS01385 PF04085 rod shape-determining protein MreC AVL56_RS01390 PF04093 rod shape-determining protein MreD AVL56_RS01395 PF02545 Maf-like protein AVL56_RS01400 PF00575 S1 RNA binding domain AVL56_RS01400 PF10150 Ribonuclease E/G family AVL56_RS01410 PF00795 Carbon-nitrogen hydrolase AVL56_RS01415 PF01523 Putative modulator of DNA gyrase AVL56_RS01425 PF04751 Protein of unknown function (DUF615) AVL56_RS01430 PF01523 Putative modulator of DNA gyrase AVL56_RS01440 PF00703 Glycosyl hydrolases family 2 AVL56_RS01440 PF02929 Beta galactosidase small chain AVL56_RS01440 PF16353 Domain of unknown function(DUF4981) AVL56_RS01440 PF02837 Glycosyl hydrolases family 2, sugar binding domain AVL56_RS01440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AVL56_RS01445 PF00072 Response regulator receiver domain AVL56_RS01445 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS01450 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS01450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL56_RS01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS01455 PF08323 Starch synthase catalytic domain AVL56_RS01455 PF00534 Glycosyl transferases group 1 AVL56_RS01460 PF05175 Methyltransferase small domain AVL56_RS01460 PF08468 Methyltransferase small domain N-terminal AVL56_RS01465 PF02390 Putative methyltransferase AVL56_RS01475 PF10576 Iron-sulfur binding domain of endonuclease III AVL56_RS01475 PF14815 NUDIX domain AVL56_RS01475 PF00730 HhH-GPD superfamily base excision DNA repair protein AVL56_RS01475 PF00633 Helix-hairpin-helix motif AVL56_RS01480 PF04362 Bacterial Fe(2+) trafficking AVL56_RS01510 PF00672 HAMP domain AVL56_RS01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS01510 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS01510 PF16750 Sensor domain of 2-component histidine kinase AVL56_RS01515 PF00072 Response regulator receiver domain AVL56_RS01515 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS01525 PF00672 HAMP domain AVL56_RS01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS01525 PF17200 Single Cache domain 2 AVL56_RS01530 PF00072 Response regulator receiver domain AVL56_RS01535 PF02895 Signal transducing histidine kinase, homodimeric domain AVL56_RS01535 PF01584 CheW-like domain AVL56_RS01535 PF09078 CheY binding AVL56_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS01535 PF01627 Hpt domain AVL56_RS01540 PF01584 CheW-like domain AVL56_RS01545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS01545 PF08447 PAS fold AVL56_RS01545 PF13426 PAS domain AVL56_RS01550 PF01739 CheR methyltransferase, SAM binding domain AVL56_RS01550 PF03705 CheR methyltransferase, all-alpha domain AVL56_RS01555 PF03975 CheD chemotactic sensory transduction AVL56_RS01560 PF00072 Response regulator receiver domain AVL56_RS01560 PF01339 CheB methylesterase AVL56_RS01575 PF01435 Peptidase family M48 AVL56_RS01590 PF08448 PAS fold AVL56_RS01590 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS01590 PF00072 Response regulator receiver domain AVL56_RS01590 PF13426 PAS domain AVL56_RS01610 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS01615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL56_RS01615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL56_RS01625 PF03825 Nucleoside H+ symporter AVL56_RS01635 PF00732 GMC oxidoreductase AVL56_RS01635 PF05199 GMC oxidoreductase AVL56_RS01680 PF00465 Iron-containing alcohol dehydrogenase AVL56_RS01685 PF00300 Histidine phosphatase superfamily (branch 1) AVL56_RS01690 PF00330 Aconitase family (aconitate hydratase) AVL56_RS01690 PF00694 Aconitase C-terminal domain AVL56_RS01700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVL56_RS01700 PF00437 Type II/IV secretion system protein AVL56_RS01705 PF00338 Ribosomal protein S10p/S20e AVL56_RS01710 PF00297 Ribosomal protein L3 AVL56_RS01715 PF00573 Ribosomal protein L4/L1 family AVL56_RS01720 PF00276 Ribosomal protein L23 AVL56_RS01725 PF00181 Ribosomal Proteins L2, RNA binding domain AVL56_RS01725 PF03947 Ribosomal Proteins L2, C-terminal domain AVL56_RS01730 PF00203 Ribosomal protein S19 AVL56_RS01735 PF00237 Ribosomal protein L22p/L17e AVL56_RS01740 PF07650 KH domain AVL56_RS01740 PF00189 Ribosomal protein S3, C-terminal domain AVL56_RS01745 PF00252 Ribosomal protein L16p/L10e AVL56_RS01750 PF00831 Ribosomal L29 protein AVL56_RS01755 PF00366 Ribosomal protein S17 AVL56_RS01760 PF13439 Glycosyltransferase Family 4 AVL56_RS01760 PF00534 Glycosyl transferases group 1 AVL56_RS01765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVL56_RS01770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVL56_RS01770 PF00534 Glycosyl transferases group 1 AVL56_RS01790 PF02743 Cache domain AVL56_RS01790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS01790 PF00672 HAMP domain AVL56_RS01795 PF01432 Peptidase family M3 AVL56_RS01805 PF00551 Formyl transferase AVL56_RS01805 PF01842 ACT domain AVL56_RS01815 PF00271 Helicase conserved C-terminal domain AVL56_RS01815 PF08482 ATP-dependent helicase C-terminal AVL56_RS01815 PF04408 Helicase associated domain (HA2) AVL56_RS01815 PF00270 DEAD/DEAH box helicase AVL56_RS01820 PF13406 Transglycosylase SLT domain AVL56_RS01830 PF00912 Transglycosylase AVL56_RS01830 PF00905 Penicillin binding protein transpeptidase domain AVL56_RS01830 PF14814 Bifunctional transglycosylase second domain AVL56_RS01840 PF05661 Protein of unknown function (DUF808) AVL56_RS01860 PF00543 Nitrogen regulatory protein P-II AVL56_RS01865 PF00909 Ammonium Transporter Family AVL56_RS01875 PF04261 Dyp-type peroxidase family AVL56_RS01880 PF00211 Adenylate and Guanylate cyclase catalytic domain AVL56_RS01880 PF00672 HAMP domain AVL56_RS01885 PF00202 Aminotransferase class-III AVL56_RS01890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVL56_RS01890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVL56_RS01895 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS01905 PF00873 AcrB/AcrD/AcrF family AVL56_RS01915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL56_RS01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS01915 PF00072 Response regulator receiver domain AVL56_RS01915 PF00672 HAMP domain AVL56_RS01915 PF01627 Hpt domain AVL56_RS01915 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS01920 PF03989 DNA gyrase C-terminal domain, beta-propeller AVL56_RS01920 PF00521 DNA gyrase/topoisomerase IV, subunit A AVL56_RS01930 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS01930 PF00563 EAL domain AVL56_RS01930 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS01940 PF00171 Aldehyde dehydrogenase family AVL56_RS01945 PF04958 Arginine N-succinyltransferase beta subunit AVL56_RS01950 PF00202 Aminotransferase class-III AVL56_RS01960 PF00117 Glutamine amidotransferase class-I AVL56_RS01965 PF00579 tRNA synthetases class I (W and Y) AVL56_RS01970 PF00834 Ribulose-phosphate 3 epimerase family AVL56_RS01990 PF02086 D12 class N6 adenine-specific DNA methyltransferase AVL56_RS02000 PF01761 3-dehydroquinate synthase AVL56_RS02005 PF01202 Shikimate kinase AVL56_RS02010 PF03958 Bacterial type II/III secretion system short domain AVL56_RS02010 PF00263 Bacterial type II and III secretion system protein AVL56_RS02010 PF11741 AMIN domain AVL56_RS02010 PF07660 Secretin and TonB N terminus short domain AVL56_RS02020 PF04350 Pilus assembly protein, PilO AVL56_RS02025 PF05137 Fimbrial assembly protein (PilN) AVL56_RS02030 PF11104 Type IV pilus assembly protein PilM; AVL56_RS02035 PF00912 Transglycosylase AVL56_RS02035 PF17092 Penicillin-binding protein OB-like domain AVL56_RS02035 PF00905 Penicillin binding protein transpeptidase domain AVL56_RS02040 PF00390 Malic enzyme, N-terminal domain AVL56_RS02040 PF03949 Malic enzyme, NAD binding domain AVL56_RS02045 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS02080 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS02080 PF00563 EAL domain AVL56_RS02080 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS02085 PF00583 Acetyltransferase (GNAT) family AVL56_RS02085 PF00696 Amino acid kinase family AVL56_RS02090 PF00206 Lyase AVL56_RS02090 PF14698 Argininosuccinate lyase C-terminal AVL56_RS02095 PF00764 Arginosuccinate synthase AVL56_RS02100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVL56_RS02100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVL56_RS02105 PF00696 Amino acid kinase family AVL56_RS02110 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVL56_RS02110 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVL56_RS02115 PF02142 MGS-like domain AVL56_RS02125 PF02107 Flagellar L-ring protein AVL56_RS02140 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS02140 PF00072 Response regulator receiver domain AVL56_RS02145 PF16527 Two-component sensor protein CpxA, periplasmic domain AVL56_RS02145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS02145 PF00672 HAMP domain AVL56_RS02145 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS02150 PF12146 Serine aminopeptidase, S33 AVL56_RS02155 PF00588 SpoU rRNA Methylase family AVL56_RS02160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVL56_RS02160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVL56_RS02165 PF02556 Preprotein translocase subunit SecB AVL56_RS02170 PF00462 Glutaredoxin AVL56_RS02180 PF01551 Peptidase family M23 AVL56_RS02190 PF04748 Divergent polysaccharide deacetylase AVL56_RS02200 PF03009 Glycerophosphoryl diester phosphodiesterase family AVL56_RS02210 PF02666 Phosphatidylserine decarboxylase AVL56_RS02215 PF03193 RsgA GTPase AVL56_RS02220 PF00929 Exonuclease AVL56_RS02235 PF00593 TonB dependent receptor AVL56_RS02235 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS02240 PF13181 Tetratricopeptide repeat AVL56_RS02255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVL56_RS02255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVL56_RS02255 PF00205 Thiamine pyrophosphate enzyme, central domain AVL56_RS02260 PF10369 Small subunit of acetolactate synthase AVL56_RS02270 PF02416 mttA/Hcf106 family AVL56_RS02275 PF02416 mttA/Hcf106 family AVL56_RS02280 PF00902 Sec-independent protein translocase protein (TatC) AVL56_RS02290 PF01026 TatD related DNase AVL56_RS02295 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS02300 PF00490 Delta-aminolevulinic acid dehydratase AVL56_RS02305 PF02541 Ppx/GppA phosphatase family AVL56_RS02310 PF00270 DEAD/DEAH box helicase AVL56_RS02310 PF00271 Helicase conserved C-terminal domain AVL56_RS02315 PF00085 Thioredoxin AVL56_RS02320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL56_RS02320 PF07497 Rho termination factor, RNA-binding domain AVL56_RS02320 PF07498 Rho termination factor, N-terminal domain AVL56_RS02325 PF01546 Peptidase family M20/M25/M40 AVL56_RS02325 PF07687 Peptidase dimerisation domain AVL56_RS02330 PF00072 Response regulator receiver domain AVL56_RS02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS02330 PF09308 LuxQ, periplasmic AVL56_RS02330 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS02335 PF06965 Na+/H+ antiporter 1 AVL56_RS02340 PF00731 AIR carboxylase AVL56_RS02345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVL56_RS02345 PF02222 ATP-grasp domain AVL56_RS02360 PF00210 Ferritin-like domain AVL56_RS02365 PF07995 Glucose / Sorbosone dehydrogenase AVL56_RS02375 PF00085 Thioredoxin AVL56_RS02385 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AVL56_RS02390 PF00709 Adenylosuccinate synthetase AVL56_RS02395 PF00171 Aldehyde dehydrogenase family AVL56_RS02410 PF03553 Na+/H+ antiporter family AVL56_RS02415 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL56_RS02435 PF07075 Protein of unknown function (DUF1343) AVL56_RS02440 PF01380 SIS domain AVL56_RS02445 PF00842 Alanine racemase, C-terminal domain AVL56_RS02445 PF01168 Alanine racemase, N-terminal domain AVL56_RS02460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL56_RS02475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS02475 PF00672 HAMP domain AVL56_RS02475 PF12729 Four helix bundle sensory module for signal transduction AVL56_RS02495 PF00583 Acetyltransferase (GNAT) family AVL56_RS02505 PF03358 NADPH-dependent FMN reductase AVL56_RS02535 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AVL56_RS02540 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AVL56_RS02635 PF00550 Phosphopantetheine attachment site AVL56_RS02685 PF00589 Phage integrase family AVL56_RS02685 PF13495 Phage integrase, N-terminal SAM-like domain AVL56_RS02690 PF00108 Thiolase, N-terminal domain AVL56_RS02690 PF02803 Thiolase, C-terminal domain AVL56_RS02695 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS02695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVL56_RS02695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVL56_RS02700 PF01464 Transglycosylase SLT domain AVL56_RS02700 PF14718 Soluble lytic murein transglycosylase L domain AVL56_RS02705 PF00557 Metallopeptidase family M24 AVL56_RS02715 PF00348 Polyprenyl synthetase AVL56_RS02720 PF00829 Ribosomal prokaryotic L21 protein AVL56_RS02725 PF01016 Ribosomal L27 protein AVL56_RS02730 PF01926 50S ribosome-binding GTPase AVL56_RS02730 PF01018 GTP1/OBG AVL56_RS02740 PF09055 Nickel-containing superoxide dismutase AVL56_RS02760 PF00186 Dihydrofolate reductase AVL56_RS02765 PF00140 Sigma-70 factor, region 1.2 AVL56_RS02765 PF04542 Sigma-70 region 2 AVL56_RS02765 PF04539 Sigma-70 region 3 AVL56_RS02765 PF04545 Sigma-70, region 4 AVL56_RS02770 PF01551 Peptidase family M23 AVL56_RS02770 PF01476 LysM domain AVL56_RS02775 PF09335 SNARE associated Golgi protein AVL56_RS02785 PF01975 Survival protein SurE AVL56_RS02790 PF01142 tRNA pseudouridine synthase D (TruD) AVL56_RS02795 PF02542 YgbB family AVL56_RS02800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVL56_RS02805 PF04977 Septum formation initiator AVL56_RS02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS02815 PF17200 Single Cache domain 2 AVL56_RS02815 PF00672 HAMP domain AVL56_RS02820 PF01619 Proline dehydrogenase AVL56_RS02820 PF00171 Aldehyde dehydrogenase family AVL56_RS02820 PF14850 DNA-binding domain of Proline dehydrogenase AVL56_RS02820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVL56_RS02825 PF02321 Outer membrane efflux protein AVL56_RS02830 PF13533 Biotin-lipoyl like AVL56_RS02835 PF00873 AcrB/AcrD/AcrF family AVL56_RS02840 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS02840 PF00072 Response regulator receiver domain AVL56_RS02845 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS02850 PF08239 Bacterial SH3 domain AVL56_RS02855 PF01928 CYTH domain AVL56_RS02865 PF02976 DNA mismatch repair enzyme MutH AVL56_RS02870 PF00293 NUDIX domain AVL56_RS02875 PF01590 GAF domain AVL56_RS02875 PF05524 PEP-utilising enzyme, N-terminal AVL56_RS02875 PF00391 PEP-utilising enzyme, mobile domain AVL56_RS02875 PF02896 PEP-utilising enzyme, TIM barrel domain AVL56_RS02880 PF01925 Sulfite exporter TauE/SafE AVL56_RS02885 PF01790 Prolipoprotein diacylglyceryl transferase AVL56_RS02890 PF00303 Thymidylate synthase AVL56_RS02895 PF00072 Response regulator receiver domain AVL56_RS02895 PF01339 CheB methylesterase AVL56_RS02900 PF05230 MASE2 domain AVL56_RS02900 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS02905 PF09308 LuxQ, periplasmic AVL56_RS02905 PF00072 Response regulator receiver domain AVL56_RS02905 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS02910 PF07690 Major Facilitator Superfamily AVL56_RS02925 PF00849 RNA pseudouridylate synthase AVL56_RS02930 PF18337 RapA N-terminal Tudor like domain AVL56_RS02930 PF00271 Helicase conserved C-terminal domain AVL56_RS02930 PF00176 SNF2 family N-terminal domain AVL56_RS02930 PF18339 RapA N-terminal Tudor like domain 1 AVL56_RS02930 PF12137 RNA polymerase recycling family C-terminal AVL56_RS02935 PF02562 PhoH-like protein AVL56_RS02935 PF13638 PIN domain AVL56_RS02950 PF07729 FCD domain AVL56_RS02950 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS02955 PF16347 Domain of unknown function (DUF4976) AVL56_RS02955 PF00884 Sulfatase AVL56_RS02960 PF00171 Aldehyde dehydrogenase family AVL56_RS02970 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS02970 PF00107 Zinc-binding dehydrogenase AVL56_RS02975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL56_RS02975 PF13378 Enolase C-terminal domain-like AVL56_RS02980 PF00083 Sugar (and other) transporter AVL56_RS02985 PF00294 pfkB family carbohydrate kinase AVL56_RS03000 PF00067 Cytochrome P450 AVL56_RS03005 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS03010 PF14759 Reductase C-terminal AVL56_RS03010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS03045 PF17992 Agarase CBM like domain AVL56_RS03045 PF02449 Beta-galactosidase AVL56_RS03055 PF00722 Glycosyl hydrolases family 16 AVL56_RS03065 PF17992 Agarase CBM like domain AVL56_RS03065 PF02449 Beta-galactosidase AVL56_RS03070 PF00884 Sulfatase AVL56_RS03075 PF00722 Glycosyl hydrolases family 16 AVL56_RS03080 PF04820 Tryptophan halogenase AVL56_RS03100 PF00884 Sulfatase AVL56_RS03100 PF16385 Domain of unknown function AVL56_RS03105 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS03105 PF00593 TonB dependent receptor AVL56_RS03130 PF18206 Porphyranase catalytic subdomain 1 AVL56_RS03135 PF16347 Domain of unknown function (DUF4976) AVL56_RS03135 PF00884 Sulfatase AVL56_RS03140 PF00884 Sulfatase AVL56_RS03150 PF10414 Sirohaem synthase dimerisation region AVL56_RS03150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVL56_RS03155 PF03880 DbpA RNA binding domain AVL56_RS03155 PF12343 Cold shock protein DEAD box A AVL56_RS03155 PF00271 Helicase conserved C-terminal domain AVL56_RS03155 PF00270 DEAD/DEAH box helicase AVL56_RS03170 PF02321 Outer membrane efflux protein AVL56_RS03175 PF00293 NUDIX domain AVL56_RS03190 PF05728 Uncharacterised protein family (UPF0227) AVL56_RS03195 PF00986 DNA gyrase B subunit, carboxyl terminus AVL56_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS03195 PF01751 Toprim domain AVL56_RS03195 PF00204 DNA gyrase B AVL56_RS03200 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS03200 PF00563 EAL domain AVL56_RS03200 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS03205 PF01590 GAF domain AVL56_RS03205 PF00360 Phytochrome region AVL56_RS03205 PF08446 PAS fold AVL56_RS03205 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS03210 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS03230 PF04055 Radical SAM superfamily AVL56_RS03235 PF01132 Elongation factor P (EF-P) OB domain AVL56_RS03235 PF09285 Elongation factor P, C-terminal AVL56_RS03235 PF08207 Elongation factor P (EF-P) KOW-like domain AVL56_RS03240 PF00152 tRNA synthetases class II (D, K and N) AVL56_RS03245 PF00593 TonB dependent receptor AVL56_RS03245 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS03260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVL56_RS03265 PF05175 Methyltransferase small domain AVL56_RS03275 PF01722 BolA-like protein AVL56_RS03280 PF01569 PAP2 superfamily AVL56_RS03290 PF08376 Nitrate and nitrite sensing AVL56_RS03290 PF03861 ANTAR domain AVL56_RS03300 PF01740 STAS domain AVL56_RS03300 PF00916 Sulfate permease family AVL56_RS03305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVL56_RS03305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVL56_RS03305 PF04324 BFD-like [2Fe-2S] binding domain AVL56_RS03305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS03305 PF18267 Rubredoxin NAD+ reductase C-terminal domain AVL56_RS03310 PF13806 Rieske-like [2Fe-2S] domain AVL56_RS03315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVL56_RS03315 PF00384 Molybdopterin oxidoreductase AVL56_RS03315 PF01568 Molydopterin dinucleotide binding domain AVL56_RS03315 PF04324 BFD-like [2Fe-2S] binding domain AVL56_RS03320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVL56_RS03320 PF14824 Sirohaem biosynthesis protein central AVL56_RS03320 PF10414 Sirohaem synthase dimerisation region AVL56_RS03325 PF00591 Glycosyl transferase family, a/b domain AVL56_RS03325 PF02885 Glycosyl transferase family, helical bundle domain AVL56_RS03330 PF08447 PAS fold AVL56_RS03330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS03330 PF13426 PAS domain AVL56_RS03335 PF00005 ABC transporter AVL56_RS03340 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS03345 PF00005 ABC transporter AVL56_RS03360 PF01323 DSBA-like thioredoxin domain AVL56_RS03365 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS03365 PF00593 TonB dependent receptor AVL56_RS03370 PF01636 Phosphotransferase enzyme family AVL56_RS03375 PF13746 4Fe-4S dicluster domain AVL56_RS03375 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVL56_RS03375 PF12801 4Fe-4S binding domain AVL56_RS03390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS03390 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVL56_RS03390 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS03390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS03415 PF13378 Enolase C-terminal domain-like AVL56_RS03415 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL56_RS03420 PF00596 Class II Aldolase and Adducin N-terminal domain AVL56_RS03425 PF00293 NUDIX domain AVL56_RS03435 PF00873 AcrB/AcrD/AcrF family AVL56_RS03450 PF02743 Cache domain AVL56_RS03450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS03450 PF00672 HAMP domain AVL56_RS03455 PF03979 Sigma-70 factor, region 1.1 AVL56_RS03455 PF04546 Sigma-70, non-essential region AVL56_RS03455 PF04542 Sigma-70 region 2 AVL56_RS03455 PF04539 Sigma-70 region 3 AVL56_RS03455 PF04545 Sigma-70, region 4 AVL56_RS03455 PF00140 Sigma-70 factor, region 1.2 AVL56_RS03460 PF01807 CHC2 zinc finger AVL56_RS03460 PF10410 DnaB-helicase binding domain of primase AVL56_RS03460 PF08275 DNA primase catalytic core, N-terminal domain AVL56_RS03460 PF08278 DNA primase DnaG DnaB-binding AVL56_RS03465 PF09424 Yqey-like protein AVL56_RS03470 PF01165 Ribosomal protein S21 AVL56_RS03475 PF00814 Glycoprotease family AVL56_RS03485 PF02660 Glycerol-3-phosphate acyltransferase AVL56_RS03490 PF02152 Dihydroneopterin aldolase AVL56_RS03500 PF02673 Bacitracin resistance protein BacA AVL56_RS03505 PF01230 HIT domain AVL56_RS03520 PF03594 Benzoate membrane transport protein AVL56_RS03525 PF07883 Cupin domain AVL56_RS03525 PF01381 Helix-turn-helix AVL56_RS03530 PF04381 Putative exonuclease, RdgC AVL56_RS03535 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL56_RS03535 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS03540 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS03540 PF00072 Response regulator receiver domain AVL56_RS03545 PF11808 Phosphate regulon sensor protein PhoR AVL56_RS03545 PF00989 PAS fold AVL56_RS03545 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS03550 PF12849 PBP superfamily domain AVL56_RS03575 PF01618 MotA/TolQ/ExbB proton channel family AVL56_RS03580 PF01618 MotA/TolQ/ExbB proton channel family AVL56_RS03585 PF02472 Biopolymer transport protein ExbD/TolR AVL56_RS03590 PF03544 Gram-negative bacterial TonB protein C-terminal AVL56_RS03600 PF09411 Lipid A 3-O-deacylase (PagL) AVL56_RS03605 PF00072 Response regulator receiver domain AVL56_RS03610 PF00072 Response regulator receiver domain AVL56_RS03610 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS03610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL56_RS03610 PF00672 HAMP domain AVL56_RS03610 PF01627 Hpt domain AVL56_RS03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS03615 PF00501 AMP-binding enzyme AVL56_RS03615 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS03625 PF07995 Glucose / Sorbosone dehydrogenase AVL56_RS03630 PF06434 Aconitate hydratase 2 N-terminus AVL56_RS03630 PF00330 Aconitase family (aconitate hydratase) AVL56_RS03630 PF11791 Aconitate B N-terminal domain AVL56_RS03640 PF11791 Aconitate B N-terminal domain AVL56_RS03640 PF06434 Aconitate hydratase 2 N-terminus AVL56_RS03640 PF00330 Aconitase family (aconitate hydratase) AVL56_RS03650 PF01842 ACT domain AVL56_RS03650 PF00696 Amino acid kinase family AVL56_RS03655 PF00672 HAMP domain AVL56_RS03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS03660 PF00149 Calcineurin-like phosphoesterase AVL56_RS03665 PF04379 ApaG domain AVL56_RS03670 PF00398 Ribosomal RNA adenine dimethylase AVL56_RS03675 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVL56_RS03680 PF09312 SurA N-terminal domain AVL56_RS03680 PF00639 PPIC-type PPIASE domain AVL56_RS03685 PF04453 LPS transport system D AVL56_RS03685 PF03968 OstA-like protein AVL56_RS03690 PF00226 DnaJ domain AVL56_RS03690 PF05099 Tellurite resistance protein TerB AVL56_RS03695 PF00589 Phage integrase family AVL56_RS03695 PF02899 Phage integrase, N-terminal SAM-like domain AVL56_RS03700 PF10411 Disulfide bond isomerase protein N-terminus AVL56_RS03700 PF13098 Thioredoxin-like domain AVL56_RS03705 PF02272 DHHA1 domain AVL56_RS03705 PF01368 DHH family AVL56_RS03705 PF17768 RecJ OB domain AVL56_RS03715 PF02565 Recombination protein O C terminal AVL56_RS03715 PF11967 Recombination protein O N terminal AVL56_RS03720 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVL56_RS03725 PF01648 4'-phosphopantetheinyl transferase superfamily AVL56_RS03730 PF05958 tRNA (Uracil-5-)-methyltransferase AVL56_RS03735 PF13291 ACT domain AVL56_RS03735 PF04607 Region found in RelA / SpoT proteins AVL56_RS03735 PF02824 TGS domain AVL56_RS03740 PF03819 MazG nucleotide pyrophosphohydrolase domain AVL56_RS03755 PF00572 Ribosomal protein L13 AVL56_RS03760 PF00380 Ribosomal protein S9/S16 AVL56_RS03765 PF04542 Sigma-70 region 2 AVL56_RS03765 PF08281 Sigma-70, region 4 AVL56_RS03775 PF00593 TonB dependent receptor AVL56_RS03775 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS03785 PF01546 Peptidase family M20/M25/M40 AVL56_RS03790 PF00355 Rieske [2Fe-2S] domain AVL56_RS03790 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVL56_RS03795 PF00033 Cytochrome b/b6/petB AVL56_RS03795 PF00032 Cytochrome b(C-terminal)/b6/petD AVL56_RS03800 PF02167 Cytochrome C1 family AVL56_RS03805 PF00043 Glutathione S-transferase, C-terminal domain AVL56_RS03805 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS03810 PF04386 Stringent starvation protein B AVL56_RS03815 PF01588 Putative tRNA binding domain AVL56_RS03815 PF09334 tRNA synthetases class I (M) AVL56_RS03815 PF08264 Anticodon-binding domain of tRNA AVL56_RS03820 PF12833 Helix-turn-helix domain AVL56_RS03830 PF03448 MgtE intracellular N domain AVL56_RS03830 PF01769 Divalent cation transporter AVL56_RS03830 PF00571 CBS domain AVL56_RS03835 PF00381 PTS HPr component phosphorylation site AVL56_RS03840 PF03668 P-loop ATPase protein family AVL56_RS03845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVL56_RS03850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVL56_RS03855 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVL56_RS03855 PF04552 Sigma-54, DNA binding domain AVL56_RS03855 PF04963 Sigma-54 factor, core binding domain AVL56_RS03860 PF00005 ABC transporter AVL56_RS03860 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVL56_RS03880 PF00571 CBS domain AVL56_RS03880 PF01380 SIS domain AVL56_RS03885 PF01699 Sodium/calcium exchanger protein AVL56_RS03890 PF00005 ABC transporter AVL56_RS03895 PF02405 Permease MlaE AVL56_RS03900 PF02470 MlaD protein AVL56_RS03905 PF05494 MlaC protein AVL56_RS03915 PF01722 BolA-like protein AVL56_RS03920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVL56_RS03925 PF13180 PDZ domain AVL56_RS03930 PF13180 PDZ domain AVL56_RS03930 PF00595 PDZ domain AVL56_RS03940 PF03969 AFG1-like ATPase AVL56_RS03945 PF01709 Transcriptional regulator AVL56_RS03955 PF12833 Helix-turn-helix domain AVL56_RS03970 PF02355 Protein export membrane protein AVL56_RS03970 PF07549 SecD/SecF GG Motif AVL56_RS03975 PF00999 Sodium/hydrogen exchanger family AVL56_RS03975 PF03471 Transporter associated domain AVL56_RS03975 PF02080 TrkA-C domain AVL56_RS03985 PF13188 PAS domain AVL56_RS03985 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS03985 PF00563 EAL domain AVL56_RS03985 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS03990 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS03990 PF00072 Response regulator receiver domain AVL56_RS03990 PF09308 LuxQ, periplasmic AVL56_RS04000 PF12833 Helix-turn-helix domain AVL56_RS04000 PF06719 AraC-type transcriptional regulator N-terminus AVL56_RS04005 PF00465 Iron-containing alcohol dehydrogenase AVL56_RS04025 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVL56_RS04025 PF02772 S-adenosylmethionine synthetase, central domain AVL56_RS04025 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVL56_RS04030 PF00456 Transketolase, thiamine diphosphate binding domain AVL56_RS04030 PF02780 Transketolase, C-terminal domain AVL56_RS04030 PF02779 Transketolase, pyrimidine binding domain AVL56_RS04035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVL56_RS04035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVL56_RS04040 PF00162 Phosphoglycerate kinase AVL56_RS04045 PF00274 Fructose-bisphosphate aldolase class-I AVL56_RS04050 PF00326 Prolyl oligopeptidase family AVL56_RS04050 PF07676 WD40-like Beta Propeller Repeat AVL56_RS04055 PF02541 Ppx/GppA phosphatase family AVL56_RS04060 PF13089 Polyphosphate kinase N-terminal domain AVL56_RS04060 PF17941 Polyphosphate kinase C-terminal domain 1 AVL56_RS04060 PF13090 Polyphosphate kinase C-terminal domain 2 AVL56_RS04060 PF02503 Polyphosphate kinase middle domain AVL56_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS04080 PF00005 ABC transporter AVL56_RS04085 PF01895 PhoU domain AVL56_RS04090 PF01384 Phosphate transporter family AVL56_RS04100 PF03466 LysR substrate binding domain AVL56_RS04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS04105 PF04542 Sigma-70 region 2 AVL56_RS04105 PF08281 Sigma-70, region 4 AVL56_RS04105 PF12680 SnoaL-like domain AVL56_RS04125 PF03006 Haemolysin-III related AVL56_RS04130 PF00563 EAL domain AVL56_RS04130 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS04130 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS04145 PF00083 Sugar (and other) transporter AVL56_RS04150 PF12833 Helix-turn-helix domain AVL56_RS04155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVL56_RS04155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVL56_RS04165 PF00759 Glycosyl hydrolase family 9 AVL56_RS04165 PF02927 Cellulase N-terminal ig-like domain AVL56_RS04165 PF00801 PKD domain AVL56_RS04165 PF00553 Cellulose binding domain AVL56_RS04165 PF02013 Cellulose or protein binding domain AVL56_RS04170 PF12833 Helix-turn-helix domain AVL56_RS04175 PF04820 Tryptophan halogenase AVL56_RS04185 PF14310 Fibronectin type III-like domain AVL56_RS04185 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVL56_RS04185 PF07691 PA14 domain AVL56_RS04185 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL56_RS04190 PF01047 MarR family AVL56_RS04195 PF02566 OsmC-like protein AVL56_RS04200 PF01433 Peptidase family M1 domain AVL56_RS04210 PF09186 Domain of unknown function (DUF1949) AVL56_RS04210 PF01205 Uncharacterized protein family UPF0029 AVL56_RS04215 PF13426 PAS domain AVL56_RS04215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS04215 PF08447 PAS fold AVL56_RS04220 PF12320 Type 5 capsule protein repressor C-terminal domain AVL56_RS04220 PF00149 Calcineurin-like phosphoesterase AVL56_RS04225 PF13476 AAA domain AVL56_RS04230 PF05230 MASE2 domain AVL56_RS04230 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS04240 PF01869 BadF/BadG/BcrA/BcrD ATPase family AVL56_RS04245 PF01979 Amidohydrolase family AVL56_RS04255 PF00005 ABC transporter AVL56_RS04255 PF12848 ABC transporter AVL56_RS04275 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS04275 PF00593 TonB dependent receptor AVL56_RS04290 PF01734 Patatin-like phospholipase AVL56_RS04315 PF00593 TonB dependent receptor AVL56_RS04320 PF03466 LysR substrate binding domain AVL56_RS04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS04345 PF00145 C-5 cytosine-specific DNA methylase AVL56_RS04355 PF00589 Phage integrase family AVL56_RS04355 PF02899 Phage integrase, N-terminal SAM-like domain AVL56_RS04360 PF00589 Phage integrase family AVL56_RS04405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVL56_RS04405 PF00476 DNA polymerase family A AVL56_RS04405 PF01367 5'-3' exonuclease, C-terminal SAM fold AVL56_RS04420 PF04002 RadC-like JAB domain AVL56_RS04455 PF04172 LrgB-like family AVL56_RS04460 PF00072 Response regulator receiver domain AVL56_RS04485 PF04055 Radical SAM superfamily AVL56_RS04485 PF06969 HemN C-terminal domain AVL56_RS04490 PF01725 Ham1 family AVL56_RS04495 PF00270 DEAD/DEAH box helicase AVL56_RS04495 PF00271 Helicase conserved C-terminal domain AVL56_RS04500 PF12627 Probable RNA and SrmB- binding site of polymerase A AVL56_RS04500 PF01743 Poly A polymerase head domain AVL56_RS04505 PF13401 AAA domain AVL56_RS04505 PF01471 Putative peptidoglycan binding domain AVL56_RS04515 PF11849 Domain of unknown function (DUF3369) AVL56_RS04520 PF00694 Aconitase C-terminal domain AVL56_RS04525 PF00330 Aconitase family (aconitate hydratase) AVL56_RS04530 PF00180 Isocitrate/isopropylmalate dehydrogenase AVL56_RS04535 PF08502 LeuA allosteric (dimerisation) domain AVL56_RS04535 PF00682 HMGL-like AVL56_RS04540 PF00561 alpha/beta hydrolase fold AVL56_RS04555 PF03952 Enolase, N-terminal domain AVL56_RS04555 PF00113 Enolase, C-terminal TIM barrel domain AVL56_RS04560 PF06418 CTP synthase N-terminus AVL56_RS04560 PF00117 Glutamine amidotransferase class-I AVL56_RS04565 PF05188 MutS domain II AVL56_RS04565 PF00488 MutS domain V AVL56_RS04565 PF05190 MutS family domain IV AVL56_RS04565 PF01624 MutS domain I AVL56_RS04565 PF05192 MutS domain III AVL56_RS04570 PF02464 Competence-damaged protein AVL56_RS04575 PF00154 recA bacterial DNA recombination protein AVL56_RS04580 PF00005 ABC transporter AVL56_RS04585 PF12679 ABC-2 family transporter protein AVL56_RS04605 PF00005 ABC transporter AVL56_RS04610 PF03379 CcmB protein AVL56_RS04615 PF01578 Cytochrome C assembly protein AVL56_RS04620 PF04995 Heme exporter protein D (CcmD) AVL56_RS04625 PF03100 CcmE AVL56_RS04630 PF01578 Cytochrome C assembly protein AVL56_RS04630 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AVL56_RS04635 PF08534 Redoxin AVL56_RS04640 PF03918 Cytochrome C biogenesis protein AVL56_RS04650 PF04333 MlaA lipoprotein AVL56_RS04655 PF16363 GDP-mannose 4,6 dehydratase AVL56_RS04665 PF00854 POT family AVL56_RS04675 PF00005 ABC transporter AVL56_RS04680 PF01061 ABC-2 type transporter AVL56_RS04685 PF02563 Polysaccharide biosynthesis/export protein AVL56_RS04685 PF10531 SLBB domain AVL56_RS04695 PF00953 Glycosyl transferase family 4 AVL56_RS04700 PF00535 Glycosyl transferase family 2 AVL56_RS04710 PF00483 Nucleotidyl transferase AVL56_RS04715 PF10531 SLBB domain AVL56_RS04720 PF18324 Hypothetical protein TT1725 AVL56_RS04720 PF00180 Isocitrate/isopropylmalate dehydrogenase AVL56_RS04735 PF11892 Domain of unknown function (DUF3412) AVL56_RS04735 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AVL56_RS04735 PF03641 Possible lysine decarboxylase AVL56_RS04740 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS04745 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVL56_RS04745 PF14489 QueF-like protein AVL56_RS04750 PF07348 Syd protein (SUKH-2) AVL56_RS04775 PF00817 impB/mucB/samB family AVL56_RS04775 PF13438 Domain of unknown function (DUF4113) AVL56_RS04775 PF11799 impB/mucB/samB family C-terminal domain AVL56_RS04780 PF00717 Peptidase S24-like AVL56_RS04785 PF00326 Prolyl oligopeptidase family AVL56_RS04815 PF00849 RNA pseudouridylate synthase AVL56_RS04820 PF00258 Flavodoxin AVL56_RS04825 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVL56_RS04825 PF14602 Hexapeptide repeat of succinyl-transferase AVL56_RS04825 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS04830 PF01842 ACT domain AVL56_RS04830 PF08335 GlnD PII-uridylyltransferase AVL56_RS04830 PF01966 HD domain AVL56_RS04830 PF01909 Nucleotidyltransferase domain AVL56_RS04835 PF00557 Metallopeptidase family M24 AVL56_RS04840 PF00318 Ribosomal protein S2 AVL56_RS04845 PF00889 Elongation factor TS AVL56_RS04850 PF00696 Amino acid kinase family AVL56_RS04855 PF01765 Ribosome recycling factor AVL56_RS04860 PF01255 Putative undecaprenyl diphosphate synthase AVL56_RS04870 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVL56_RS04870 PF13288 DXP reductoisomerase C-terminal domain AVL56_RS04870 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVL56_RS04875 PF17820 PDZ domain AVL56_RS04875 PF02163 Peptidase family M50 AVL56_RS04880 PF01103 Surface antigen AVL56_RS04880 PF07244 Surface antigen variable number repeat AVL56_RS04890 PF07977 FabA-like domain AVL56_RS04895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVL56_RS04895 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS04900 PF02684 Lipid-A-disaccharide synthetase AVL56_RS04905 PF01351 Ribonuclease HII AVL56_RS04910 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVL56_RS04910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVL56_RS04910 PF14579 Helix-hairpin-helix motif AVL56_RS04910 PF02811 PHP domain AVL56_RS04910 PF01336 OB-fold nucleic acid binding domain AVL56_RS04915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVL56_RS04920 PF09179 TilS substrate binding domain AVL56_RS04920 PF01171 PP-loop family AVL56_RS04920 PF11734 TilS substrate C-terminal domain AVL56_RS04925 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS04925 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS04925 PF00563 EAL domain AVL56_RS04930 PF00999 Sodium/hydrogen exchanger family AVL56_RS04930 PF02254 TrkA-N domain AVL56_RS04930 PF02080 TrkA-C domain AVL56_RS04940 PF14437 MafB19-like deaminase AVL56_RS04945 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL56_RS04945 PF01464 Transglycosylase SLT domain AVL56_RS04950 PF02769 AIR synthase related protein, C-terminal domain AVL56_RS04950 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVL56_RS04950 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AVL56_RS04955 PF01713 Smr domain AVL56_RS04985 PF00271 Helicase conserved C-terminal domain AVL56_RS04985 PF00270 DEAD/DEAH box helicase AVL56_RS04990 PF01144 Coenzyme A transferase AVL56_RS04995 PF01144 Coenzyme A transferase AVL56_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS05000 PF03466 LysR substrate binding domain AVL56_RS05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS05015 PF03466 LysR substrate binding domain AVL56_RS05020 PF03315 Serine dehydratase beta chain AVL56_RS05020 PF03313 Serine dehydratase alpha chain AVL56_RS05025 PF00293 NUDIX domain AVL56_RS05030 PF04715 Anthranilate synthase component I, N terminal region AVL56_RS05030 PF00425 chorismate binding enzyme AVL56_RS05040 PF02646 RmuC family AVL56_RS05045 PF13860 FlgD Ig-like domain AVL56_RS05045 PF05922 Peptidase inhibitor I9 AVL56_RS05045 PF00082 Subtilase family AVL56_RS05045 PF02225 PA domain AVL56_RS05050 PF00676 Dehydrogenase E1 component AVL56_RS05055 PF02779 Transketolase, pyrimidine binding domain AVL56_RS05055 PF02780 Transketolase, C-terminal domain AVL56_RS05060 PF02817 e3 binding domain AVL56_RS05060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVL56_RS05060 PF00364 Biotin-requiring enzyme AVL56_RS05065 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVL56_RS05070 PF00069 Protein kinase domain AVL56_RS05080 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS05085 PF00266 Aminotransferase class-V AVL56_RS05095 PF13185 GAF domain AVL56_RS05105 PF04352 ProQ/FINO family AVL56_RS05105 PF17516 ProQ C-terminal domain AVL56_RS05110 PF17804 Tail specific protease N-terminal domain AVL56_RS05110 PF03572 Peptidase family S41 AVL56_RS05110 PF00595 PDZ domain AVL56_RS05110 PF11818 C-terminal domain of tail specific protease (DUF3340) AVL56_RS05115 PF00209 Sodium:neurotransmitter symporter family AVL56_RS05120 PF03553 Na+/H+ antiporter family AVL56_RS05125 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVL56_RS05125 PF01433 Peptidase family M1 domain AVL56_RS05125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVL56_RS05140 PF07044 Protein of unknown function (DUF1329) AVL56_RS05155 PF05088 Bacterial NAD-glutamate dehydrogenase AVL56_RS05160 PF01180 Dihydroorotate dehydrogenase AVL56_RS05165 PF01170 Putative RNA methylase family UPF0020 AVL56_RS05165 PF10672 S-adenosylmethionine-dependent methyltransferase AVL56_RS05165 PF02926 THUMP domain AVL56_RS05175 PF12848 ABC transporter AVL56_RS05175 PF00005 ABC transporter AVL56_RS05175 PF16326 ABC transporter C-terminal domain AVL56_RS05185 PF04957 Ribosome modulation factor AVL56_RS05190 PF07977 FabA-like domain AVL56_RS05200 PF03441 FAD binding domain of DNA photolyase AVL56_RS05200 PF00875 DNA photolyase AVL56_RS05205 PF03441 FAD binding domain of DNA photolyase AVL56_RS05205 PF00875 DNA photolyase AVL56_RS05210 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AVL56_RS05235 PF01219 Prokaryotic diacylglycerol kinase AVL56_RS05240 PF00582 Universal stress protein family AVL56_RS05250 PF01645 Conserved region in glutamate synthase AVL56_RS05255 PF00999 Sodium/hydrogen exchanger family AVL56_RS05260 PF00210 Ferritin-like domain AVL56_RS05265 PF00210 Ferritin-like domain AVL56_RS05275 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVL56_RS05290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVL56_RS05290 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVL56_RS05300 PF00403 Heavy-metal-associated domain AVL56_RS05315 PF13545 Crp-like helix-turn-helix domain AVL56_RS05315 PF00027 Cyclic nucleotide-binding domain AVL56_RS05320 PF00582 Universal stress protein family AVL56_RS05325 PF01171 PP-loop family AVL56_RS05330 PF01734 Patatin-like phospholipase AVL56_RS05350 PF00501 AMP-binding enzyme AVL56_RS05350 PF00668 Condensation domain AVL56_RS05350 PF00975 Thioesterase domain AVL56_RS05350 PF00550 Phosphopantetheine attachment site AVL56_RS05350 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS05355 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVL56_RS05360 PF00975 Thioesterase domain AVL56_RS05380 PF00501 AMP-binding enzyme AVL56_RS05380 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS05380 PF00668 Condensation domain AVL56_RS05380 PF00550 Phosphopantetheine attachment site AVL56_RS05385 PF00550 Phosphopantetheine attachment site AVL56_RS05385 PF00668 Condensation domain AVL56_RS05385 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS05385 PF00501 AMP-binding enzyme AVL56_RS05395 PF01810 LysE type translocator AVL56_RS05400 PF02146 Sir2 family AVL56_RS05405 PF00581 Rhodanese-like domain AVL56_RS05410 PF08534 Redoxin AVL56_RS05415 PF03942 DTW domain AVL56_RS05455 PF01066 CDP-alcohol phosphatidyltransferase AVL56_RS05460 PF01541 GIY-YIG catalytic domain AVL56_RS05460 PF02151 UvrB/uvrC motif AVL56_RS05460 PF08459 UvrC Helix-hairpin-helix N-terminal AVL56_RS05465 PF00072 Response regulator receiver domain AVL56_RS05465 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS05470 PF17954 Quercetinase C-terminal cupin domain AVL56_RS05470 PF02678 Pirin AVL56_RS05480 PF12867 DinB superfamily AVL56_RS05480 PF03781 Sulfatase-modifying factor enzyme 1 AVL56_RS05510 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS05510 PF08521 Two-component sensor kinase N-terminal AVL56_RS05510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS05515 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS05515 PF00072 Response regulator receiver domain AVL56_RS05530 PF00144 Beta-lactamase AVL56_RS05540 PF01027 Inhibitor of apoptosis-promoting Bax1 AVL56_RS05545 PF02635 DsrE/DsrF-like family AVL56_RS05550 PF02635 DsrE/DsrF-like family AVL56_RS05560 PF04358 DsrC like protein AVL56_RS05570 PF02403 Seryl-tRNA synthetase N-terminal domain AVL56_RS05570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVL56_RS05575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVL56_RS05580 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS05580 PF16193 AAA C-terminal domain AVL56_RS05580 PF12002 MgsA AAA+ ATPase C terminal AVL56_RS05585 PF03548 Outer membrane lipoprotein carrier protein LolA AVL56_RS05590 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVL56_RS05590 PF01580 FtsK/SpoIIIE family AVL56_RS05590 PF17854 FtsK alpha domain AVL56_RS05590 PF09397 Ftsk gamma domain AVL56_RS05595 PF01037 Lrp/AsnC ligand binding domain AVL56_RS05600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVL56_RS05600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVL56_RS05605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVL56_RS05610 PF18073 Rubredoxin metal binding domain AVL56_RS05615 PF06305 Lipopolysaccharide assembly protein A domain AVL56_RS05625 PF00216 Bacterial DNA-binding protein AVL56_RS05630 PF00575 S1 RNA binding domain AVL56_RS05635 PF02224 Cytidylate kinase AVL56_RS05640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVL56_RS05645 PF00266 Aminotransferase class-V AVL56_RS05650 PF03989 DNA gyrase C-terminal domain, beta-propeller AVL56_RS05650 PF00521 DNA gyrase/topoisomerase IV, subunit A AVL56_RS05660 PF00317 Ribonucleotide reductase, all-alpha domain AVL56_RS05660 PF02867 Ribonucleotide reductase, barrel domain AVL56_RS05660 PF03477 ATP cone domain AVL56_RS05665 PF00268 Ribonucleotide reductase, small chain AVL56_RS05670 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS05675 PF18698 Histidine kinase sensor domain AVL56_RS05675 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS05675 PF00989 PAS fold AVL56_RS05675 PF00672 HAMP domain AVL56_RS05680 PF00072 Response regulator receiver domain AVL56_RS05680 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS05705 PF13411 MerR HTH family regulatory protein AVL56_RS05705 PF07739 TipAS antibiotic-recognition domain AVL56_RS05815 PF00005 ABC transporter AVL56_RS05830 PF00593 TonB dependent receptor AVL56_RS05830 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS05840 PF00892 EamA-like transporter family AVL56_RS05845 PF01259 SAICAR synthetase AVL56_RS05850 PF06804 NlpB/DapX lipoprotein AVL56_RS05855 PF00701 Dihydrodipicolinate synthetase family AVL56_RS05865 PF00578 AhpC/TSA family AVL56_RS05870 PF01594 AI-2E family transporter AVL56_RS05875 PF01435 Peptidase family M48 AVL56_RS05885 PF03960 ArsC family AVL56_RS05890 PF03358 NADPH-dependent FMN reductase AVL56_RS05905 PF00308 Bacterial dnaA protein AVL56_RS05915 PF02769 AIR synthase related protein, C-terminal domain AVL56_RS05915 PF00586 AIR synthase related protein, N-terminal domain AVL56_RS05920 PF00551 Formyl transferase AVL56_RS05930 PF09317 Domain of unknown function (DUF1974) AVL56_RS05930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS05930 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS05930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS05940 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS05940 PF00072 Response regulator receiver domain AVL56_RS05945 PF13649 Methyltransferase domain AVL56_RS05950 PF08003 Protein of unknown function (DUF1698) AVL56_RS05955 PF00485 Phosphoribulokinase / Uridine kinase family AVL56_RS05970 PF00128 Alpha amylase, catalytic domain AVL56_RS05975 PF00994 Probable molybdopterin binding domain AVL56_RS05975 PF03454 MoeA C-terminal region (domain IV) AVL56_RS05975 PF03453 MoeA N-terminal region (domain I and II) AVL56_RS05980 PF01554 MatE AVL56_RS05995 PF01434 Peptidase family M41 AVL56_RS05995 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS05995 PF17862 AAA+ lid domain AVL56_RS06000 PF00291 Pyridoxal-phosphate dependent enzyme AVL56_RS06015 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS06030 PF02525 Flavodoxin-like fold AVL56_RS06035 PF01053 Cys/Met metabolism PLP-dependent enzyme AVL56_RS06050 PF00155 Aminotransferase class I and II AVL56_RS06055 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVL56_RS06070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS06070 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVL56_RS06070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS06070 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS06075 PF12833 Helix-turn-helix domain AVL56_RS06075 PF02311 AraC-like ligand binding domain AVL56_RS06080 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS06080 PF00593 TonB dependent receptor AVL56_RS06090 PF00873 AcrB/AcrD/AcrF family AVL56_RS06095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS06095 PF00529 HlyD membrane-fusion protein of T1SS AVL56_RS06105 PF01012 Electron transfer flavoprotein domain AVL56_RS06105 PF00766 Electron transfer flavoprotein FAD-binding domain AVL56_RS06110 PF01012 Electron transfer flavoprotein domain AVL56_RS06120 PF00816 H-NS histone family AVL56_RS06125 PF12697 Alpha/beta hydrolase family AVL56_RS06135 PF00258 Flavodoxin AVL56_RS06140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS06140 PF00672 HAMP domain AVL56_RS06145 PF01475 Ferric uptake regulator family AVL56_RS06150 PF02447 GntP family permease AVL56_RS06155 PF01202 Shikimate kinase AVL56_RS06160 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS06165 PF01063 Amino-transferase class IV AVL56_RS06170 PF02626 Carboxyltransferase domain, subdomain A and B AVL56_RS06180 PF03746 LamB/YcsF family AVL56_RS06185 PF13509 S1 domain AVL56_RS06185 PF17783 CvfB-like winged helix domain AVL56_RS06190 PF02566 OsmC-like protein AVL56_RS06195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS06200 PF00873 AcrB/AcrD/AcrF family AVL56_RS06205 PF00873 AcrB/AcrD/AcrF family AVL56_RS06220 PF00155 Aminotransferase class I and II AVL56_RS06230 PF01966 HD domain AVL56_RS06230 PF13286 Phosphohydrolase-associated domain AVL56_RS06240 PF00174 Oxidoreductase molybdopterin binding domain AVL56_RS06245 PF01794 Ferric reductase like transmembrane component AVL56_RS06250 PF09335 SNARE associated Golgi protein AVL56_RS06260 PF02810 SEC-C motif AVL56_RS06270 PF01717 Cobalamin-independent synthase, Catalytic domain AVL56_RS06270 PF08267 Cobalamin-independent synthase, N-terminal domain AVL56_RS06295 PF09905 DNA-binding protein VF530 AVL56_RS06305 PF00583 Acetyltransferase (GNAT) family AVL56_RS06310 PF00005 ABC transporter AVL56_RS06320 PF00575 S1 RNA binding domain AVL56_RS06320 PF03725 3' exoribonuclease family, domain 2 AVL56_RS06320 PF01138 3' exoribonuclease family, domain 1 AVL56_RS06320 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVL56_RS06320 PF00013 KH domain AVL56_RS06335 PF00171 Aldehyde dehydrogenase family AVL56_RS06340 PF00696 Amino acid kinase family AVL56_RS06345 PF00474 Sodium:solute symporter family AVL56_RS06365 PF00781 Diacylglycerol kinase catalytic domain AVL56_RS06375 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS06375 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS06375 PF00563 EAL domain AVL56_RS06385 PF03840 Preprotein translocase SecG subunit AVL56_RS06390 PF00121 Triosephosphate isomerase AVL56_RS06395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVL56_RS06395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVL56_RS06395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVL56_RS06395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVL56_RS06400 PF00809 Pterin binding enzyme AVL56_RS06405 PF06480 FtsH Extracellular AVL56_RS06405 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS06405 PF01434 Peptidase family M41 AVL56_RS06405 PF17862 AAA+ lid domain AVL56_RS06410 PF01728 FtsJ-like methyltransferase AVL56_RS06415 PF01985 CRS1 / YhbY (CRM) domain AVL56_RS06420 PF00106 short chain dehydrogenase AVL56_RS06425 PF13654 AAA domain AVL56_RS06425 PF05362 Lon protease (S16) C-terminal proteolytic domain AVL56_RS06430 PF08264 Anticodon-binding domain of tRNA AVL56_RS06430 PF00133 tRNA synthetases class I (I, L, M and V) AVL56_RS06430 PF13603 Leucyl-tRNA synthetase, Domain 2 AVL56_RS06440 PF06144 DNA polymerase III, delta subunit AVL56_RS06440 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AVL56_RS06445 PF01467 Cytidylyltransferase-like AVL56_RS06455 PF02590 Predicted SPOUT methyltransferase AVL56_RS06460 PF03717 Penicillin-binding Protein dimerisation domain AVL56_RS06460 PF00905 Penicillin binding protein transpeptidase domain AVL56_RS06465 PF01098 Cell cycle protein AVL56_RS06470 PF03330 Lytic transglycolase AVL56_RS06470 PF05036 Sporulation related domain AVL56_RS06475 PF07943 Penicillin-binding protein 5, C-terminal domain AVL56_RS06475 PF00768 D-alanyl-D-alanine carboxypeptidase AVL56_RS06480 PF04359 Protein of unknown function (DUF493) AVL56_RS06485 PF03099 Biotin/lipoate A/B protein ligase family AVL56_RS06490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVL56_RS06490 PF04055 Radical SAM superfamily AVL56_RS06500 PF00710 Asparaginase, N-terminal AVL56_RS06500 PF17763 Glutaminase/Asparaginase C-terminal domain AVL56_RS06510 PF00881 Nitroreductase family AVL56_RS06525 PF01343 Peptidase family S49 AVL56_RS06530 PF17283 SprT-like zinc ribbon domain AVL56_RS06530 PF10263 SprT-like family AVL56_RS06535 PF04217 Protein of unknown function, DUF412 AVL56_RS06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS06550 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVL56_RS06555 PF04376 Arginine-tRNA-protein transferase, N terminus AVL56_RS06555 PF04377 Arginine-tRNA-protein transferase, C terminus AVL56_RS06560 PF01176 Translation initiation factor 1A / IF-1 AVL56_RS06565 PF02861 Clp amino terminal domain, pathogenicity island component AVL56_RS06565 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS06565 PF10431 C-terminal, D2-small domain, of ClpB protein AVL56_RS06565 PF17871 AAA lid domain AVL56_RS06565 PF07724 AAA domain (Cdc48 subfamily) AVL56_RS06570 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVL56_RS06575 PF00313 'Cold-shock' DNA-binding domain AVL56_RS06580 PF03971 Monomeric isocitrate dehydrogenase AVL56_RS06585 PF00849 RNA pseudouridylate synthase AVL56_RS06595 PF04356 Protein of unknown function (DUF489) AVL56_RS06600 PF00206 Lyase AVL56_RS06600 PF08328 Adenylosuccinate lyase C-terminal AVL56_RS06605 PF00211 Adenylate and Guanylate cyclase catalytic domain AVL56_RS06610 PF08007 Cupin superfamily protein AVL56_RS06625 PF01565 FAD binding domain AVL56_RS06625 PF02913 FAD linked oxidases, C-terminal domain AVL56_RS06625 PF13183 4Fe-4S dicluster domain AVL56_RS06630 PF06865 Pyrimidine/purine nucleoside phosphorylase AVL56_RS06635 PF11954 Domain of unknown function (DUF3471) AVL56_RS06635 PF00144 Beta-lactamase AVL56_RS06675 PF03551 Transcriptional regulator PadR-like family AVL56_RS06715 PF14592 Chondroitinase B AVL56_RS06720 PF01202 Shikimate kinase AVL56_RS06745 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS06750 PF03547 Membrane transport protein AVL56_RS06760 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS06760 PF01799 [2Fe-2S] binding domain AVL56_RS06765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVL56_RS06770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVL56_RS06770 PF02896 PEP-utilising enzyme, TIM barrel domain AVL56_RS06770 PF00391 PEP-utilising enzyme, mobile domain AVL56_RS06775 PF03618 Kinase/pyrophosphorylase AVL56_RS06790 PF14552 Tautomerase enzyme AVL56_RS06805 PF04191 Phospholipid methyltransferase AVL56_RS06810 PF06271 RDD family AVL56_RS06830 PF00072 Response regulator receiver domain AVL56_RS06830 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS06835 PF13460 NAD(P)H-binding AVL56_RS06845 PF01026 TatD related DNase AVL56_RS06850 PF09115 DNA polymerase III, delta subunit, C terminal AVL56_RS06855 PF02223 Thymidylate kinase AVL56_RS06860 PF02618 YceG-like family AVL56_RS06865 PF01063 Amino-transferase class IV AVL56_RS06870 PF02801 Beta-ketoacyl synthase, C-terminal domain AVL56_RS06870 PF00109 Beta-ketoacyl synthase, N-terminal domain AVL56_RS06875 PF00550 Phosphopantetheine attachment site AVL56_RS06885 PF00698 Acyl transferase domain AVL56_RS06890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVL56_RS06890 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVL56_RS06895 PF02504 Fatty acid synthesis protein AVL56_RS06900 PF01783 Ribosomal L32p protein family AVL56_RS06905 PF02620 Large ribosomal RNA subunit accumulation protein YceD AVL56_RS06910 PF02545 Maf-like protein AVL56_RS06915 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS06920 PF00849 RNA pseudouridylate synthase AVL56_RS06920 PF01479 S4 domain AVL56_RS06925 PF00575 S1 RNA binding domain AVL56_RS06925 PF10150 Ribonuclease E/G family AVL56_RS06925 PF12111 Polyribonucleotide phosphorylase C terminal AVL56_RS06940 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS06945 PF13673 Acetyltransferase (GNAT) domain AVL56_RS06955 PF03466 LysR substrate binding domain AVL56_RS06955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS06965 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS06980 PF00962 Adenosine/AMP deaminase AVL56_RS06990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS06990 PF03466 LysR substrate binding domain AVL56_RS07000 PF08272 Topoisomerase I zinc-ribbon-like AVL56_RS07000 PF01131 DNA topoisomerase AVL56_RS07000 PF01751 Toprim domain AVL56_RS07000 PF01396 Topoisomerase DNA binding C4 zinc finger AVL56_RS07005 PF04996 Succinylarginine dihydrolase AVL56_RS07015 PF00375 Sodium:dicarboxylate symporter family AVL56_RS07020 PF12704 MacB-like periplasmic core domain AVL56_RS07020 PF02687 FtsX-like permease family AVL56_RS07025 PF00005 ABC transporter AVL56_RS07030 PF12792 CSS motif domain associated with EAL AVL56_RS07030 PF00563 EAL domain AVL56_RS07060 PF00929 Exonuclease AVL56_RS07065 PF00075 RNase H AVL56_RS07070 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS07070 PF00698 Acyl transferase domain AVL56_RS07070 PF08659 KR domain AVL56_RS07070 PF00550 Phosphopantetheine attachment site AVL56_RS07070 PF14765 Polyketide synthase dehydratase AVL56_RS07070 PF02801 Beta-ketoacyl synthase, C-terminal domain AVL56_RS07070 PF00109 Beta-ketoacyl synthase, N-terminal domain AVL56_RS07070 PF16197 Ketoacyl-synthetase C-terminal extension AVL56_RS07075 PF10672 S-adenosylmethionine-dependent methyltransferase AVL56_RS07075 PF17785 PUA-like domain AVL56_RS07090 PF04408 Helicase associated domain (HA2) AVL56_RS07090 PF11898 Domain of unknown function (DUF3418) AVL56_RS07090 PF00270 DEAD/DEAH box helicase AVL56_RS07090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVL56_RS07090 PF00271 Helicase conserved C-terminal domain AVL56_RS07120 PF02333 Phytase AVL56_RS07130 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS07130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL56_RS07130 PF00072 Response regulator receiver domain AVL56_RS07130 PF00672 HAMP domain AVL56_RS07130 PF01627 Hpt domain AVL56_RS07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS07135 PF00929 Exonuclease AVL56_RS07135 PF08411 Exonuclease C-terminal AVL56_RS07145 PF17151 Periplasmic sensor domain AVL56_RS07145 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07150 PF00108 Thiolase, N-terminal domain AVL56_RS07150 PF02803 Thiolase, C-terminal domain AVL56_RS07155 PF13411 MerR HTH family regulatory protein AVL56_RS07160 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS07160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS07160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS07165 PF01039 Carboxyl transferase domain AVL56_RS07170 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS07175 PF02785 Biotin carboxylase C-terminal domain AVL56_RS07175 PF00289 Biotin carboxylase, N-terminal domain AVL56_RS07175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVL56_RS07175 PF18140 Propionyl-coenzyme A carboxylase BT domain AVL56_RS07175 PF00364 Biotin-requiring enzyme AVL56_RS07180 PF00682 HMGL-like AVL56_RS07190 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07190 PF00563 EAL domain AVL56_RS07190 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS07205 PF01156 Inosine-uridine preferring nucleoside hydrolase AVL56_RS07210 PF00483 Nucleotidyl transferase AVL56_RS07220 PF07690 Major Facilitator Superfamily AVL56_RS07255 PF03372 Endonuclease/Exonuclease/phosphatase family AVL56_RS07275 PF02687 FtsX-like permease family AVL56_RS07275 PF12704 MacB-like periplasmic core domain AVL56_RS07285 PF00270 DEAD/DEAH box helicase AVL56_RS07285 PF03461 TRCF domain AVL56_RS07285 PF00271 Helicase conserved C-terminal domain AVL56_RS07285 PF02559 CarD-like/TRCF domain AVL56_RS07285 PF17757 UvrB interaction domain AVL56_RS07295 PF01923 Cobalamin adenosyltransferase AVL56_RS07300 PF00939 Sodium:sulfate symporter transmembrane region AVL56_RS07305 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL56_RS07310 PF01804 Penicillin amidase AVL56_RS07315 PF04073 Aminoacyl-tRNA editing domain AVL56_RS07325 PF00216 Bacterial DNA-binding protein AVL56_RS07330 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVL56_RS07330 PF01588 Putative tRNA binding domain AVL56_RS07330 PF03483 B3/4 domain AVL56_RS07330 PF03484 tRNA synthetase B5 domain AVL56_RS07330 PF03147 Ferredoxin-fold anticodon binding domain AVL56_RS07335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVL56_RS07335 PF01409 tRNA synthetases class II core domain (F) AVL56_RS07340 PF01757 Acyltransferase family AVL56_RS07345 PF01757 Acyltransferase family AVL56_RS07350 PF01757 Acyltransferase family AVL56_RS07355 PF01757 Acyltransferase family AVL56_RS07360 PF00535 Glycosyl transferase family 2 AVL56_RS07365 PF13579 Glycosyl transferase 4-like domain AVL56_RS07365 PF00534 Glycosyl transferases group 1 AVL56_RS07385 PF13439 Glycosyltransferase Family 4 AVL56_RS07385 PF00534 Glycosyl transferases group 1 AVL56_RS07395 PF00535 Glycosyl transferase family 2 AVL56_RS07400 PF00534 Glycosyl transferases group 1 AVL56_RS07400 PF13477 Glycosyl transferase 4-like AVL56_RS07410 PF13439 Glycosyltransferase Family 4 AVL56_RS07410 PF00534 Glycosyl transferases group 1 AVL56_RS07420 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07420 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS07420 PF00563 EAL domain AVL56_RS07450 PF13614 AAA domain AVL56_RS07455 PF10531 SLBB domain AVL56_RS07455 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AVL56_RS07455 PF02563 Polysaccharide biosynthesis/export protein AVL56_RS07475 PF00453 Ribosomal protein L20 AVL56_RS07480 PF01632 Ribosomal protein L35 AVL56_RS07485 PF00707 Translation initiation factor IF-3, C-terminal domain AVL56_RS07485 PF05198 Translation initiation factor IF-3, N-terminal domain AVL56_RS07490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVL56_RS07490 PF03129 Anticodon binding domain AVL56_RS07490 PF02824 TGS domain AVL56_RS07490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVL56_RS07525 PF01425 Amidase AVL56_RS07535 PF01925 Sulfite exporter TauE/SafE AVL56_RS07540 PF00266 Aminotransferase class-V AVL56_RS07545 PF01546 Peptidase family M20/M25/M40 AVL56_RS07545 PF07687 Peptidase dimerisation domain AVL56_RS07555 PF00962 Adenosine/AMP deaminase AVL56_RS07560 PF00860 Permease family AVL56_RS07565 PF00593 TonB dependent receptor AVL56_RS07565 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS07575 PF00072 Response regulator receiver domain AVL56_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS07575 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS07575 PF09308 LuxQ, periplasmic AVL56_RS07580 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07580 PF00072 Response regulator receiver domain AVL56_RS07585 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07585 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS07585 PF00563 EAL domain AVL56_RS07595 PF00962 Adenosine/AMP deaminase AVL56_RS07600 PF00860 Permease family AVL56_RS07615 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS07615 PF08362 YcdC-like protein, C-terminal region AVL56_RS07620 PF01799 [2Fe-2S] binding domain AVL56_RS07620 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS07625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVL56_RS07625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVL56_RS07640 PF00576 HIUase/Transthyretin family AVL56_RS07645 PF01979 Amidohydrolase family AVL56_RS07655 PF00563 EAL domain AVL56_RS07655 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07655 PF13426 PAS domain AVL56_RS07655 PF05231 MASE1 AVL56_RS07655 PF08447 PAS fold AVL56_RS07655 PF08448 PAS fold AVL56_RS07660 PF12706 Beta-lactamase superfamily domain AVL56_RS07675 PF17158 Membrane-associated sensor, integral membrane domain AVL56_RS07675 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07690 PF04209 homogentisate 1,2-dioxygenase AVL56_RS07695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL56_RS07710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVL56_RS07715 PF03960 ArsC family AVL56_RS07720 PF07687 Peptidase dimerisation domain AVL56_RS07720 PF01546 Peptidase family M20/M25/M40 AVL56_RS07735 PF01906 Putative heavy-metal-binding AVL56_RS07745 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVL56_RS07750 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS07750 PF00563 EAL domain AVL56_RS07750 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07755 PF00343 Carbohydrate phosphorylase AVL56_RS07760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVL56_RS07760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVL56_RS07760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVL56_RS07760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVL56_RS07765 PF17206 SeqA protein N-terminal domain AVL56_RS07765 PF03925 SeqA protein C-terminal domain AVL56_RS07770 PF17863 AAA lid domain AVL56_RS07770 PF07726 ATPase family associated with various cellular activities (AAA) AVL56_RS07780 PF01841 Transglutaminase-like superfamily AVL56_RS07780 PF11992 Domain of unknown function (DUF3488) AVL56_RS07780 PF13559 Domain of unknown function (DUF4129) AVL56_RS07785 PF01226 Formate/nitrite transporter AVL56_RS07790 PF00069 Protein kinase domain AVL56_RS07790 PF03793 PASTA domain AVL56_RS07795 PF02560 Cyanate lyase C-terminal domain AVL56_RS07800 PF00679 Elongation factor G C-terminus AVL56_RS07800 PF03764 Elongation factor G, domain IV AVL56_RS07800 PF00009 Elongation factor Tu GTP binding domain AVL56_RS07800 PF03144 Elongation factor Tu domain 2 AVL56_RS07800 PF14492 Elongation Factor G, domain II AVL56_RS07805 PF01728 FtsJ-like methyltransferase AVL56_RS07805 PF18125 RlmM ferredoxin-like domain AVL56_RS07820 PF03466 LysR substrate binding domain AVL56_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS07830 PF00793 DAHP synthetase I family AVL56_RS07835 PF04247 Invasion gene expression up-regulator, SirB AVL56_RS07840 PF11849 Domain of unknown function (DUF3369) AVL56_RS07845 PF17827 PrmC N-terminal domain AVL56_RS07845 PF13847 Methyltransferase domain AVL56_RS07850 PF00472 RF-1 domain AVL56_RS07850 PF03462 PCRF domain AVL56_RS07855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVL56_RS07855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVL56_RS07855 PF01488 Shikimate / quinate 5-dehydrogenase AVL56_RS07860 PF03550 Outer membrane lipoprotein LolB AVL56_RS07865 PF08544 GHMP kinases C terminal AVL56_RS07865 PF00288 GHMP kinases N terminal domain AVL56_RS07875 PF14572 Phosphoribosyl synthetase-associated domain AVL56_RS07875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVL56_RS07880 PF00563 EAL domain AVL56_RS07880 PF08448 PAS fold AVL56_RS07880 PF08447 PAS fold AVL56_RS07880 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS07890 PF00107 Zinc-binding dehydrogenase AVL56_RS07890 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS07895 PF01386 Ribosomal L25p family AVL56_RS07895 PF14693 Ribosomal protein TL5, C-terminal domain AVL56_RS07900 PF01195 Peptidyl-tRNA hydrolase AVL56_RS07905 PF06071 Protein of unknown function (DUF933) AVL56_RS07905 PF01926 50S ribosome-binding GTPase AVL56_RS07910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVL56_RS07935 PF01235 Sodium:alanine symporter family AVL56_RS07940 PF01613 Flavin reductase like domain AVL56_RS07955 PF01494 FAD binding domain AVL56_RS07960 PF00919 Uncharacterized protein family UPF0004 AVL56_RS07960 PF04055 Radical SAM superfamily AVL56_RS07960 PF01938 TRAM domain AVL56_RS07965 PF02562 PhoH-like protein AVL56_RS07970 PF02130 Uncharacterized protein family UPF0054 AVL56_RS07975 PF00571 CBS domain AVL56_RS07975 PF03471 Transporter associated domain AVL56_RS07980 PF00795 Carbon-nitrogen hydrolase AVL56_RS07985 PF01515 Phosphate acetyl/butaryl transferase AVL56_RS07985 PF07085 DRTGG domain AVL56_RS07990 PF00871 Acetokinase family AVL56_RS07995 PF00011 Hsp20/alpha crystallin family AVL56_RS08015 PF12729 Four helix bundle sensory module for signal transduction AVL56_RS08015 PF00672 HAMP domain AVL56_RS08015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS08020 PF03449 Transcription elongation factor, N-terminal AVL56_RS08020 PF01272 Transcription elongation factor, GreA/GreB, C-term AVL56_RS08025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVL56_RS08025 PF02142 MGS-like domain AVL56_RS08025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVL56_RS08030 PF00117 Glutamine amidotransferase class-I AVL56_RS08030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVL56_RS08035 PF01113 Dihydrodipicolinate reductase, N-terminus AVL56_RS08035 PF05173 Dihydrodipicolinate reductase, C-terminus AVL56_RS08045 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS08045 PF16177 Acetyl-coenzyme A synthetase N-terminus AVL56_RS08045 PF00501 AMP-binding enzyme AVL56_RS08050 PF00360 Phytochrome region AVL56_RS08050 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS08050 PF01590 GAF domain AVL56_RS08050 PF00563 EAL domain AVL56_RS08055 PF01322 Cytochrome C' AVL56_RS08060 PF01556 DnaJ C terminal domain AVL56_RS08060 PF00226 DnaJ domain AVL56_RS08060 PF00684 DnaJ central domain AVL56_RS08065 PF00012 Hsp70 protein AVL56_RS08070 PF01025 GrpE AVL56_RS08075 PF09308 LuxQ, periplasmic AVL56_RS08075 PF00072 Response regulator receiver domain AVL56_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS08075 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS08080 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS08080 PF00072 Response regulator receiver domain AVL56_RS08085 PF00593 TonB dependent receptor AVL56_RS08085 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS08095 PF00561 alpha/beta hydrolase fold AVL56_RS08110 PF01513 ATP-NAD kinase AVL56_RS08115 PF02463 RecF/RecN/SMC N terminal domain AVL56_RS08120 PF04355 SmpA / OmlA family AVL56_RS08125 PF05724 Thiopurine S-methyltransferase (TPMT) AVL56_RS08130 PF04286 Protein of unknown function (DUF445) AVL56_RS08135 PF03960 ArsC family AVL56_RS08145 PF14602 Hexapeptide repeat of succinyl-transferase AVL56_RS08145 PF12464 Maltose acetyltransferase AVL56_RS08150 PF00248 Aldo/keto reductase family AVL56_RS08160 PF01479 S4 domain AVL56_RS08160 PF00849 RNA pseudouridylate synthase AVL56_RS08165 PF04079 Segregation and condensation complex subunit ScpB AVL56_RS08170 PF02616 Segregation and condensation protein ScpA AVL56_RS08175 PF01300 Telomere recombination AVL56_RS08180 PF02811 PHP domain AVL56_RS08185 PF04715 Anthranilate synthase component I, N terminal region AVL56_RS08185 PF00425 chorismate binding enzyme AVL56_RS08190 PF00117 Glutamine amidotransferase class-I AVL56_RS08195 PF00591 Glycosyl transferase family, a/b domain AVL56_RS08195 PF02885 Glycosyl transferase family, helical bundle domain AVL56_RS08200 PF00218 Indole-3-glycerol phosphate synthase AVL56_RS08200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVL56_RS08205 PF00291 Pyridoxal-phosphate dependent enzyme AVL56_RS08210 PF00290 Tryptophan synthase alpha chain AVL56_RS08215 PF03795 YCII-related domain AVL56_RS08230 PF00072 Response regulator receiver domain AVL56_RS08230 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS08235 PF08918 PhoQ Sensor AVL56_RS08240 PF01594 AI-2E family transporter AVL56_RS08245 PF02152 Dihydroneopterin aldolase AVL56_RS08250 PF01370 NAD dependent epimerase/dehydratase family AVL56_RS08250 PF08338 Domain of unknown function (DUF1731) AVL56_RS08260 PF00005 ABC transporter AVL56_RS08265 PF13472 GDSL-like Lipase/Acylhydrolase family AVL56_RS08280 PF01207 Dihydrouridine synthase (Dus) AVL56_RS08305 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVL56_RS08325 PF00072 Response regulator receiver domain AVL56_RS08325 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS08335 PF06463 Molybdenum Cofactor Synthesis C AVL56_RS08335 PF04055 Radical SAM superfamily AVL56_RS08340 PF00664 ABC transporter transmembrane region AVL56_RS08340 PF00005 ABC transporter AVL56_RS08355 PF01474 Class-II DAHP synthetase family AVL56_RS08360 PF00005 ABC transporter AVL56_RS08365 PF01032 FecCD transport family AVL56_RS08370 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVL56_RS08375 PF03575 Peptidase family S51 AVL56_RS08385 PF08241 Methyltransferase domain AVL56_RS08385 PF12697 Alpha/beta hydrolase family AVL56_RS08390 PF00155 Aminotransferase class I and II AVL56_RS08395 PF06968 Biotin and Thiamin Synthesis associated domain AVL56_RS08395 PF04055 Radical SAM superfamily AVL56_RS08400 PF00202 Aminotransferase class-III AVL56_RS08415 PF00583 Acetyltransferase (GNAT) family AVL56_RS08420 PF18030 RimK PreATP-grasp domain AVL56_RS08420 PF08443 RimK-like ATP-grasp domain AVL56_RS08425 PF01699 Sodium/calcium exchanger protein AVL56_RS08435 PF01336 OB-fold nucleic acid binding domain AVL56_RS08435 PF00152 tRNA synthetases class II (D, K and N) AVL56_RS08445 PF04403 Paraquat-inducible protein A AVL56_RS08450 PF02470 MlaD protein AVL56_RS08460 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS08465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS08470 PF00873 AcrB/AcrD/AcrF family AVL56_RS08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS08480 PF03466 LysR substrate binding domain AVL56_RS08485 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS08485 PF08361 MAATS-type transcriptional repressor, C-terminal region AVL56_RS08495 PF00873 AcrB/AcrD/AcrF family AVL56_RS08500 PF00571 CBS domain AVL56_RS08505 PF00107 Zinc-binding dehydrogenase AVL56_RS08505 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS08510 PF00107 Zinc-binding dehydrogenase AVL56_RS08510 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS08515 PF03466 LysR substrate binding domain AVL56_RS08520 PF01292 Prokaryotic cytochrome b561 AVL56_RS08525 PF00106 short chain dehydrogenase AVL56_RS08530 PF00296 Luciferase-like monooxygenase AVL56_RS08535 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVL56_RS08535 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVL56_RS08560 PF07690 Major Facilitator Superfamily AVL56_RS08565 PF09308 LuxQ, periplasmic AVL56_RS08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS08565 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS08565 PF00072 Response regulator receiver domain AVL56_RS08605 PF00557 Metallopeptidase family M24 AVL56_RS08615 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS08615 PF00072 Response regulator receiver domain AVL56_RS08620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVL56_RS08640 PF10091 Putative glucoamylase AVL56_RS08640 PF06165 Glycosyltransferase family 36 AVL56_RS08640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AVL56_RS08655 PF01145 SPFH domain / Band 7 family AVL56_RS08660 PF13185 GAF domain AVL56_RS08660 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS08670 PF12833 Helix-turn-helix domain AVL56_RS08670 PF02311 AraC-like ligand binding domain AVL56_RS08675 PF01494 FAD binding domain AVL56_RS08685 PF00355 Rieske [2Fe-2S] domain AVL56_RS08690 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS08690 PF00175 Oxidoreductase NAD-binding domain AVL56_RS08695 PF12706 Beta-lactamase superfamily domain AVL56_RS08700 PF00593 TonB dependent receptor AVL56_RS08700 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS08715 PF00135 Carboxylesterase family AVL56_RS08720 PF14310 Fibronectin type III-like domain AVL56_RS08720 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL56_RS08720 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVL56_RS08725 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS08725 PF00593 TonB dependent receptor AVL56_RS08730 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS08735 PF07690 Major Facilitator Superfamily AVL56_RS08750 PF00881 Nitroreductase family AVL56_RS08760 PF03466 LysR substrate binding domain AVL56_RS08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS08765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVL56_RS08780 PF00355 Rieske [2Fe-2S] domain AVL56_RS08785 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS08785 PF00175 Oxidoreductase NAD-binding domain AVL56_RS08790 PF01047 MarR family AVL56_RS08795 PF01494 FAD binding domain AVL56_RS08805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL56_RS08815 PF04199 Putative cyclase AVL56_RS08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS08825 PF03466 LysR substrate binding domain AVL56_RS08850 PF00248 Aldo/keto reductase family AVL56_RS08855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL56_RS08860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AVL56_RS08865 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AVL56_RS08870 PF04909 Amidohydrolase AVL56_RS08875 PF04909 Amidohydrolase AVL56_RS08880 PF04303 PrpF protein AVL56_RS08885 PF03737 Aldolase/RraA AVL56_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS08890 PF03466 LysR substrate binding domain AVL56_RS08900 PF02445 Quinolinate synthetase A protein AVL56_RS08920 PF13174 Tetratricopeptide repeat AVL56_RS08920 PF16331 TolA binding protein trimerisation AVL56_RS08925 PF00691 OmpA family AVL56_RS08930 PF07676 WD40-like Beta Propeller Repeat AVL56_RS08930 PF04052 TolB amino-terminal domain AVL56_RS08940 PF02472 Biopolymer transport protein ExbD/TolR AVL56_RS08945 PF01618 MotA/TolQ/ExbB proton channel family AVL56_RS08950 PF03061 Thioesterase superfamily AVL56_RS08955 PF17864 RuvB AAA lid domain AVL56_RS08955 PF05491 RuvB C-terminal winged helix domain AVL56_RS08955 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVL56_RS08960 PF07499 RuvA, C-terminal domain AVL56_RS08960 PF01330 RuvA N terminal domain AVL56_RS08965 PF02075 Crossover junction endodeoxyribonuclease RuvC AVL56_RS08970 PF00293 NUDIX domain AVL56_RS08975 PF02938 GAD domain AVL56_RS08975 PF01336 OB-fold nucleic acid binding domain AVL56_RS08975 PF00152 tRNA synthetases class II (D, K and N) AVL56_RS08990 PF00158 Sigma-54 interaction domain AVL56_RS08990 PF00072 Response regulator receiver domain AVL56_RS09000 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS09010 PF00563 EAL domain AVL56_RS09010 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS09010 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS09020 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS09020 PF00072 Response regulator receiver domain AVL56_RS09030 PF01253 Translation initiation factor SUI1 AVL56_RS09035 PF00072 Response regulator receiver domain AVL56_RS09040 PF00800 Prephenate dehydratase AVL56_RS09040 PF01817 Chorismate mutase type II AVL56_RS09045 PF12729 Four helix bundle sensory module for signal transduction AVL56_RS09045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS09045 PF00672 HAMP domain AVL56_RS09050 PF02153 Prephenate dehydrogenase AVL56_RS09050 PF01817 Chorismate mutase type II AVL56_RS09055 PF00793 DAHP synthetase I family AVL56_RS09060 PF03458 UPF0126 domain AVL56_RS09075 PF01245 Ribosomal protein L19 AVL56_RS09080 PF01746 tRNA (Guanine-1)-methyltransferase AVL56_RS09085 PF05239 PRC-barrel domain AVL56_RS09085 PF01782 RimM N-terminal domain AVL56_RS09090 PF00886 Ribosomal protein S16 AVL56_RS09105 PF01053 Cys/Met metabolism PLP-dependent enzyme AVL56_RS09110 PF00005 ABC transporter AVL56_RS09110 PF00664 ABC transporter transmembrane region AVL56_RS09115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS09120 PF00873 AcrB/AcrD/AcrF family AVL56_RS09125 PF03600 Citrate transporter AVL56_RS09155 PF00448 SRP54-type protein, GTPase domain AVL56_RS09155 PF02978 Signal peptide binding domain AVL56_RS09155 PF02881 SRP54-type protein, helical bundle domain AVL56_RS09160 PF01578 Cytochrome C assembly protein AVL56_RS09165 PF03471 Transporter associated domain AVL56_RS09165 PF01595 Cyclin M transmembrane N-terminal domain AVL56_RS09165 PF00571 CBS domain AVL56_RS09175 PF00300 Histidine phosphatase superfamily (branch 1) AVL56_RS09180 PF00675 Insulinase (Peptidase family M16) AVL56_RS09180 PF05193 Peptidase M16 inactive domain AVL56_RS09180 PF16187 Middle or third domain of peptidase_M16 AVL56_RS09185 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS09185 PF00563 EAL domain AVL56_RS09185 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS09195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVL56_RS09195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVL56_RS09195 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS09200 PF02803 Thiolase, C-terminal domain AVL56_RS09200 PF00108 Thiolase, N-terminal domain AVL56_RS09205 PF17863 AAA lid domain AVL56_RS09205 PF07726 ATPase family associated with various cellular activities (AAA) AVL56_RS09210 PF01882 Protein of unknown function DUF58 AVL56_RS09220 PF00092 von Willebrand factor type A domain AVL56_RS09225 PF07584 Aerotolerance regulator N-terminal AVL56_RS09225 PF00092 von Willebrand factor type A domain AVL56_RS09240 PF04542 Sigma-70 region 2 AVL56_RS09240 PF04545 Sigma-70, region 4 AVL56_RS09250 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS09250 PF17158 Membrane-associated sensor, integral membrane domain AVL56_RS09255 PF00474 Sodium:solute symporter family AVL56_RS09260 PF01507 Phosphoadenosine phosphosulfate reductase family AVL56_RS09270 PF00459 Inositol monophosphatase family AVL56_RS09275 PF00009 Elongation factor Tu GTP binding domain AVL56_RS09280 PF03600 Citrate transporter AVL56_RS09280 PF02080 TrkA-C domain AVL56_RS09305 PF13537 Glutamine amidotransferase domain AVL56_RS09305 PF00733 Asparagine synthase AVL56_RS09315 PF04055 Radical SAM superfamily AVL56_RS09320 PF06508 Queuosine biosynthesis protein QueC AVL56_RS09340 PF04851 Type III restriction enzyme, res subunit AVL56_RS09340 PF02151 UvrB/uvrC motif AVL56_RS09340 PF12344 Ultra-violet resistance protein B AVL56_RS09340 PF17757 UvrB interaction domain AVL56_RS09340 PF00271 Helicase conserved C-terminal domain AVL56_RS09345 PF01554 MatE AVL56_RS09360 PF02508 Rnf-Nqr subunit, membrane protein AVL56_RS09365 PF04060 Putative Fe-S cluster AVL56_RS09370 PF13375 RnfC Barrel sandwich hybrid domain AVL56_RS09370 PF10531 SLBB domain AVL56_RS09370 PF12838 4Fe-4S dicluster domain AVL56_RS09370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVL56_RS09375 PF03116 NQR2, RnfD, RnfE family AVL56_RS09380 PF04205 FMN-binding domain AVL56_RS09385 PF02508 Rnf-Nqr subunit, membrane protein AVL56_RS09390 PF10576 Iron-sulfur binding domain of endonuclease III AVL56_RS09390 PF00633 Helix-hairpin-helix motif AVL56_RS09390 PF00730 HhH-GPD superfamily base excision DNA repair protein AVL56_RS09400 PF00144 Beta-lactamase AVL56_RS09405 PF10576 Iron-sulfur binding domain of endonuclease III AVL56_RS09405 PF00633 Helix-hairpin-helix motif AVL56_RS09405 PF00730 HhH-GPD superfamily base excision DNA repair protein AVL56_RS09410 PF00561 alpha/beta hydrolase fold AVL56_RS09415 PF00326 Prolyl oligopeptidase family AVL56_RS09415 PF07676 WD40-like Beta Propeller Repeat AVL56_RS09420 PF04389 Peptidase family M28 AVL56_RS09420 PF02225 PA domain AVL56_RS09430 PF00563 EAL domain AVL56_RS09430 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS09430 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS09440 PF00313 'Cold-shock' DNA-binding domain AVL56_RS09445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL56_RS09450 PF03009 Glycerophosphoryl diester phosphodiesterase family AVL56_RS09455 PF18393 MotY N-terminal domain AVL56_RS09455 PF00691 OmpA family AVL56_RS09460 PF00929 Exonuclease AVL56_RS09465 PF00578 AhpC/TSA family AVL56_RS09465 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVL56_RS09470 PF04324 BFD-like [2Fe-2S] binding domain AVL56_RS09490 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS09490 PF00593 TonB dependent receptor AVL56_RS09495 PF00462 Glutaredoxin AVL56_RS09500 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AVL56_RS09500 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AVL56_RS09505 PF06798 PrkA serine protein kinase C-terminal domain AVL56_RS09505 PF08298 PrkA AAA domain AVL56_RS09510 PF04285 Protein of unknown function (DUF444) AVL56_RS09515 PF04293 SpoVR like protein AVL56_RS09530 PF01264 Chorismate synthase AVL56_RS09535 PF05175 Methyltransferase small domain AVL56_RS09540 PF01713 Smr domain AVL56_RS09545 PF00989 PAS fold AVL56_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS09545 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS09550 PF00072 Response regulator receiver domain AVL56_RS09550 PF02954 Bacterial regulatory protein, Fis family AVL56_RS09550 PF00158 Sigma-54 interaction domain AVL56_RS09555 PF02687 FtsX-like permease family AVL56_RS09555 PF12704 MacB-like periplasmic core domain AVL56_RS09555 PF00005 ABC transporter AVL56_RS09565 PF00005 ABC transporter AVL56_RS09585 PF04262 Glutamate-cysteine ligase AVL56_RS09590 PF00675 Insulinase (Peptidase family M16) AVL56_RS09590 PF05193 Peptidase M16 inactive domain AVL56_RS09600 PF00849 RNA pseudouridylate synthase AVL56_RS09605 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVL56_RS09605 PF02558 Ketopantoate reductase PanE/ApbA AVL56_RS09610 PF01336 OB-fold nucleic acid binding domain AVL56_RS09610 PF00152 tRNA synthetases class II (D, K and N) AVL56_RS09615 PF03462 PCRF domain AVL56_RS09615 PF00472 RF-1 domain AVL56_RS09630 PF01966 HD domain AVL56_RS09635 PF06155 Protein of unknown function (DUF971) AVL56_RS09635 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVL56_RS09650 PF00563 EAL domain AVL56_RS09650 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS09650 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS09655 PF00750 tRNA synthetases class I (R) AVL56_RS09655 PF05746 DALR anticodon binding domain AVL56_RS09655 PF03485 Arginyl tRNA synthetase N terminal domain AVL56_RS09660 PF16658 Class II release factor RF3, C-terminal domain AVL56_RS09660 PF03144 Elongation factor Tu domain 2 AVL56_RS09660 PF00009 Elongation factor Tu GTP binding domain AVL56_RS09665 PF03466 LysR substrate binding domain AVL56_RS09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS09680 PF00583 Acetyltransferase (GNAT) family AVL56_RS09720 PF17176 tRNA-binding domain AVL56_RS09720 PF05127 Helicase AVL56_RS09720 PF13718 GNAT acetyltransferase 2 AVL56_RS09720 PF08351 Domain of unknown function (DUF1726) AVL56_RS09730 PF03544 Gram-negative bacterial TonB protein C-terminal AVL56_RS09735 PF02472 Biopolymer transport protein ExbD/TolR AVL56_RS09740 PF01618 MotA/TolQ/ExbB proton channel family AVL56_RS09745 PF01618 MotA/TolQ/ExbB proton channel family AVL56_RS09780 PF00593 TonB dependent receptor AVL56_RS09780 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS09785 PF00593 TonB dependent receptor AVL56_RS09790 PF03301 Tryptophan 2,3-dioxygenase AVL56_RS09805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVL56_RS09805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVL56_RS09810 PF01037 Lrp/AsnC ligand binding domain AVL56_RS09815 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS09815 PF14497 Glutathione S-transferase, C-terminal domain AVL56_RS09825 PF00158 Sigma-54 interaction domain AVL56_RS09825 PF18024 Helix-turn-helix domain AVL56_RS09830 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AVL56_RS09840 PF06667 Phage shock protein B AVL56_RS09845 PF04012 PspA/IM30 family AVL56_RS09850 PF00158 Sigma-54 interaction domain AVL56_RS09850 PF02954 Bacterial regulatory protein, Fis family AVL56_RS09855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVL56_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS09865 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS09865 PF12911 N-terminal TM domain of oligopeptide transport permease C AVL56_RS09870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVL56_RS09870 PF00005 ABC transporter AVL56_RS09875 PF00005 ABC transporter AVL56_RS09880 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AVL56_RS09885 PF02436 Conserved carboxylase domain AVL56_RS09885 PF00682 HMGL-like AVL56_RS09885 PF00364 Biotin-requiring enzyme AVL56_RS09895 PF03061 Thioesterase superfamily AVL56_RS09915 PF02599 Global regulator protein family AVL56_RS09935 PF05649 Peptidase family M13 AVL56_RS09935 PF01431 Peptidase family M13 AVL56_RS09940 PF13977 BetI-type transcriptional repressor, C-terminal AVL56_RS09940 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS09950 PF00916 Sulfate permease family AVL56_RS09950 PF01740 STAS domain AVL56_RS09955 PF00484 Carbonic anhydrase AVL56_RS09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS09960 PF03466 LysR substrate binding domain AVL56_RS09965 PF03466 LysR substrate binding domain AVL56_RS09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS09975 PF02607 B12 binding domain AVL56_RS09975 PF02574 Homocysteine S-methyltransferase AVL56_RS09975 PF00809 Pterin binding enzyme AVL56_RS09975 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVL56_RS09975 PF02310 B12 binding domain AVL56_RS09980 PF00809 Pterin binding enzyme AVL56_RS09980 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVL56_RS09980 PF02607 B12 binding domain AVL56_RS09980 PF02574 Homocysteine S-methyltransferase AVL56_RS09980 PF02310 B12 binding domain AVL56_RS09985 PF04204 Homoserine O-succinyltransferase AVL56_RS09995 PF01584 CheW-like domain AVL56_RS10005 PF13614 AAA domain AVL56_RS10010 PF00072 Response regulator receiver domain AVL56_RS10010 PF01339 CheB methylesterase AVL56_RS10015 PF01627 Hpt domain AVL56_RS10015 PF00072 Response regulator receiver domain AVL56_RS10015 PF01584 CheW-like domain AVL56_RS10015 PF02895 Signal transducing histidine kinase, homodimeric domain AVL56_RS10015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS10020 PF04344 Chemotaxis phosphatase, CheZ AVL56_RS10025 PF00072 Response regulator receiver domain AVL56_RS10030 PF04539 Sigma-70 region 3 AVL56_RS10030 PF04545 Sigma-70, region 4 AVL56_RS10030 PF04542 Sigma-70 region 2 AVL56_RS10035 PF10609 NUBPL iron-transfer P-loop NTPase AVL56_RS10040 PF00448 SRP54-type protein, GTPase domain AVL56_RS10045 PF00771 FHIPEP family AVL56_RS10050 PF01312 FlhB HrpN YscU SpaS Family AVL56_RS10055 PF01311 Bacterial export proteins, family 1 AVL56_RS10060 PF01313 Bacterial export proteins, family 3 AVL56_RS10065 PF00813 FliP family AVL56_RS10070 PF04347 Flagellar biosynthesis protein, FliO AVL56_RS10075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVL56_RS10080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVL56_RS10080 PF02154 Flagellar motor switch protein FliM AVL56_RS10100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL56_RS10100 PF18269 T3SS EscN ATPase C-terminal domain AVL56_RS10110 PF14842 FliG N-terminal domain AVL56_RS10110 PF01706 FliG C-terminal domain AVL56_RS10110 PF14841 FliG middle domain AVL56_RS10115 PF01514 Secretory protein of YscJ/FliF family AVL56_RS10115 PF08345 Flagellar M-ring protein C-terminal AVL56_RS10120 PF02049 Flagellar hook-basal body complex protein FliE AVL56_RS10125 PF02954 Bacterial regulatory protein, Fis family AVL56_RS10125 PF00072 Response regulator receiver domain AVL56_RS10125 PF00158 Sigma-54 interaction domain AVL56_RS10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS10130 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS10130 PF13188 PAS domain AVL56_RS10135 PF06490 Flagellar regulatory protein FleQ AVL56_RS10135 PF02954 Bacterial regulatory protein, Fis family AVL56_RS10135 PF00158 Sigma-54 interaction domain AVL56_RS10140 PF08884 Flagellin D3 domain AVL56_RS10140 PF00669 Bacterial flagellin N-terminal helical region AVL56_RS10140 PF00700 Bacterial flagellin C-terminal helical region AVL56_RS10145 PF02719 Polysaccharide biosynthesis protein AVL56_RS10150 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVL56_RS10155 PF02348 Cytidylyltransferase AVL56_RS10165 PF08666 SAF domain AVL56_RS10165 PF03102 NeuB family AVL56_RS10180 PF00501 AMP-binding enzyme AVL56_RS10180 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS10190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVL56_RS10205 PF13472 GDSL-like Lipase/Acylhydrolase family AVL56_RS10205 PF02348 Cytidylyltransferase AVL56_RS10220 PF08666 SAF domain AVL56_RS10220 PF03102 NeuB family AVL56_RS10225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVL56_RS10230 PF16363 GDP-mannose 4,6 dehydratase AVL56_RS10240 PF17101 Stealth protein CR1, conserved region 1 AVL56_RS10240 PF17102 Stealth protein CR3, conserved region 3 AVL56_RS10240 PF11380 Stealth protein CR2, conserved region 2 AVL56_RS10255 PF02561 Flagellar protein FliS AVL56_RS10260 PF07195 Flagellar hook-associated protein 2 C-terminus AVL56_RS10260 PF02465 Flagellar hook-associated protein 2 N-terminus AVL56_RS10260 PF07196 Flagellin hook IN motif AVL56_RS10265 PF03646 FlaG protein AVL56_RS10270 PF00669 Bacterial flagellin N-terminal helical region AVL56_RS10270 PF07196 Flagellin hook IN motif AVL56_RS10270 PF00700 Bacterial flagellin C-terminal helical region AVL56_RS10275 PF00669 Bacterial flagellin N-terminal helical region AVL56_RS10275 PF00700 Bacterial flagellin C-terminal helical region AVL56_RS10275 PF07196 Flagellin hook IN motif AVL56_RS10280 PF07196 Flagellin hook IN motif AVL56_RS10280 PF00700 Bacterial flagellin C-terminal helical region AVL56_RS10280 PF00669 Bacterial flagellin N-terminal helical region AVL56_RS10295 PF00460 Flagella basal body rod protein AVL56_RS10295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL56_RS10300 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVL56_RS10300 PF10135 Rod binding protein AVL56_RS10305 PF02119 Flagellar P-ring protein AVL56_RS10310 PF02107 Flagellar L-ring protein AVL56_RS10315 PF00460 Flagella basal body rod protein AVL56_RS10315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL56_RS10320 PF00460 Flagella basal body rod protein AVL56_RS10320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL56_RS10325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL56_RS10325 PF07559 Flagellar basal body protein FlaE AVL56_RS10325 PF00460 Flagella basal body rod protein AVL56_RS10330 PF03963 Flagellar hook capping protein - N-terminal region AVL56_RS10330 PF13861 FlgD Tudor-like domain AVL56_RS10330 PF13860 FlgD Ig-like domain AVL56_RS10335 PF00460 Flagella basal body rod protein AVL56_RS10335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL56_RS10340 PF00460 Flagella basal body rod protein AVL56_RS10345 PF01739 CheR methyltransferase, SAM binding domain AVL56_RS10345 PF03705 CheR methyltransferase, all-alpha domain AVL56_RS10350 PF00072 Response regulator receiver domain AVL56_RS10350 PF01584 CheW-like domain AVL56_RS10390 PF00072 Response regulator receiver domain AVL56_RS10390 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS10395 PF00529 HlyD membrane-fusion protein of T1SS AVL56_RS10395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS10400 PF00664 ABC transporter transmembrane region AVL56_RS10400 PF00005 ABC transporter AVL56_RS10400 PF03412 Peptidase C39 family AVL56_RS10405 PF00691 OmpA family AVL56_RS10405 PF00223 Photosystem I psaA/psaB protein AVL56_RS10500 PF00849 RNA pseudouridylate synthase AVL56_RS10500 PF01479 S4 domain AVL56_RS10510 PF00581 Rhodanese-like domain AVL56_RS10510 PF17773 UPF0176 acylphosphatase like domain AVL56_RS10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS10520 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS10520 PF01627 Hpt domain AVL56_RS10520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL56_RS10520 PF00989 PAS fold AVL56_RS10520 PF00072 Response regulator receiver domain AVL56_RS10530 PF00365 Phosphofructokinase AVL56_RS10535 PF04397 LytTr DNA-binding domain AVL56_RS10535 PF00072 Response regulator receiver domain AVL56_RS10540 PF07694 5TMR of 5TMR-LYT AVL56_RS10540 PF06580 Histidine kinase AVL56_RS10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS10560 PF01551 Peptidase family M23 AVL56_RS10560 PF01476 LysM domain AVL56_RS10570 PF04245 37-kD nucleoid-associated bacterial protein AVL56_RS10575 PF07208 Protein of unknown function (DUF1414) AVL56_RS10580 PF11893 Domain of unknown function (DUF3413) AVL56_RS10580 PF00884 Sulfatase AVL56_RS10585 PF08645 Polynucleotide kinase 3 phosphatase AVL56_RS10590 PF13847 Methyltransferase domain AVL56_RS10595 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS10600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS10600 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS10600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS10610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL56_RS10610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVL56_RS10615 PF00255 Glutathione peroxidase AVL56_RS10620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL56_RS10620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL56_RS10625 PF13847 Methyltransferase domain AVL56_RS10630 PF01784 NIF3 (NGG1p interacting factor 3) AVL56_RS10650 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS10655 PF08496 Peptidase family S49 N-terminal AVL56_RS10655 PF01343 Peptidase family S49 AVL56_RS10660 PF01804 Penicillin amidase AVL56_RS10665 PF12262 Bacterial virulence factor lipase N-terminal AVL56_RS10670 PF00106 short chain dehydrogenase AVL56_RS10675 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVL56_RS10675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVL56_RS10680 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS10685 PF00686 Starch binding domain AVL56_RS10685 PF00128 Alpha amylase, catalytic domain AVL56_RS10695 PF10438 Cyclo-malto-dextrinase C-terminal domain AVL56_RS10695 PF00128 Alpha amylase, catalytic domain AVL56_RS10695 PF09087 Cyclomaltodextrinase, N-terminal AVL56_RS10700 PF02903 Alpha amylase, N-terminal ig-like domain AVL56_RS10700 PF16657 Maltogenic Amylase, C-terminal domain AVL56_RS10700 PF00128 Alpha amylase, catalytic domain AVL56_RS10715 PF01734 Patatin-like phospholipase AVL56_RS10720 PF03714 Bacterial pullanase-associated domain AVL56_RS10720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVL56_RS10720 PF18494 Pullulanase Ins domain AVL56_RS10720 PF11852 Domain of unknown function (DUF3372) AVL56_RS10720 PF17967 Pullulanase N2 domain AVL56_RS10730 PF04820 Tryptophan halogenase AVL56_RS10740 PF00549 CoA-ligase AVL56_RS10740 PF02629 CoA binding domain AVL56_RS10745 PF00549 CoA-ligase AVL56_RS10745 PF08442 ATP-grasp domain AVL56_RS10750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVL56_RS10750 PF02817 e3 binding domain AVL56_RS10750 PF00364 Biotin-requiring enzyme AVL56_RS10755 PF16870 2-oxoglutarate dehydrogenase C-terminal AVL56_RS10755 PF02779 Transketolase, pyrimidine binding domain AVL56_RS10755 PF00676 Dehydrogenase E1 component AVL56_RS10755 PF16078 2-oxoglutarate dehydrogenase N-terminus AVL56_RS10760 PF13085 2Fe-2S iron-sulfur cluster binding domain AVL56_RS10765 PF02910 Fumarate reductase flavoprotein C-term AVL56_RS10765 PF00890 FAD binding domain AVL56_RS10770 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVL56_RS10775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVL56_RS10780 PF00285 Citrate synthase, C-terminal domain AVL56_RS10790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVL56_RS10790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVL56_RS10790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVL56_RS10790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVL56_RS10795 PF13409 Glutathione S-transferase, N-terminal domain AVL56_RS10800 PF01266 FAD dependent oxidoreductase AVL56_RS10805 PF00899 ThiF family AVL56_RS10830 PF00919 Uncharacterized protein family UPF0004 AVL56_RS10830 PF18693 TRAM domain AVL56_RS10830 PF04055 Radical SAM superfamily AVL56_RS10835 PF00106 short chain dehydrogenase AVL56_RS10840 PF02348 Cytidylyltransferase AVL56_RS10845 PF03966 Trm112p-like protein AVL56_RS10850 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVL56_RS10855 PF00664 ABC transporter transmembrane region AVL56_RS10855 PF00005 ABC transporter AVL56_RS10870 PF00533 BRCA1 C Terminus (BRCT) domain AVL56_RS10870 PF01653 NAD-dependent DNA ligase adenylation domain AVL56_RS10870 PF03120 NAD-dependent DNA ligase OB-fold domain AVL56_RS10870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVL56_RS10870 PF12826 Helix-hairpin-helix motif AVL56_RS10875 PF04354 ZipA, C-terminal FtsZ-binding domain AVL56_RS10880 PF02463 RecF/RecN/SMC N terminal domain AVL56_RS10880 PF06470 SMC proteins Flexible Hinge Domain AVL56_RS10895 PF07719 Tetratricopeptide repeat AVL56_RS10895 PF13181 Tetratricopeptide repeat AVL56_RS10900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVL56_RS10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS10920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL56_RS10925 PF07690 Major Facilitator Superfamily AVL56_RS10945 PF05163 DinB family AVL56_RS10950 PF13181 Tetratricopeptide repeat AVL56_RS10955 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS10955 PF00593 TonB dependent receptor AVL56_RS10960 PF02028 BCCT, betaine/carnitine/choline family transporter AVL56_RS10970 PF03658 RnfH family Ubiquitin AVL56_RS10975 PF03364 Polyketide cyclase / dehydrase and lipid transport AVL56_RS10980 PF01668 SmpB protein AVL56_RS10985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS10985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL56_RS10995 PF05840 Bacteriophage replication gene A protein (GPA) AVL56_RS11035 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS11035 PF00593 TonB dependent receptor AVL56_RS11040 PF07690 Major Facilitator Superfamily AVL56_RS11045 PF00652 Ricin-type beta-trefoil lectin domain AVL56_RS11065 PF05199 GMC oxidoreductase AVL56_RS11065 PF00732 GMC oxidoreductase AVL56_RS11070 PF00171 Aldehyde dehydrogenase family AVL56_RS11080 PF04542 Sigma-70 region 2 AVL56_RS11080 PF08281 Sigma-70, region 4 AVL56_RS11085 PF04542 Sigma-70 region 2 AVL56_RS11085 PF08281 Sigma-70, region 4 AVL56_RS11090 PF12146 Serine aminopeptidase, S33 AVL56_RS11110 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS11110 PF00593 TonB dependent receptor AVL56_RS11115 PF03466 LysR substrate binding domain AVL56_RS11115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS11135 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS11135 PF00563 EAL domain AVL56_RS11135 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS11150 PF00360 Phytochrome region AVL56_RS11150 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS11150 PF01590 GAF domain AVL56_RS11150 PF00563 EAL domain AVL56_RS11165 PF01066 CDP-alcohol phosphatidyltransferase AVL56_RS11170 PF00005 ABC transporter AVL56_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS11180 PF13416 Bacterial extracellular solute-binding protein AVL56_RS11190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS11190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL56_RS11195 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS11195 PF00593 TonB dependent receptor AVL56_RS11210 PF08497 Radical SAM N-terminal AVL56_RS11210 PF04055 Radical SAM superfamily AVL56_RS11210 PF11842 Domain of unknown function (DUF3362) AVL56_RS11235 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS11235 PF00593 TonB dependent receptor AVL56_RS11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS11240 PF13192 Thioredoxin domain AVL56_RS11245 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVL56_RS11245 PF00578 AhpC/TSA family AVL56_RS11275 PF00795 Carbon-nitrogen hydrolase AVL56_RS11275 PF00583 Acetyltransferase (GNAT) family AVL56_RS11285 PF12697 Alpha/beta hydrolase family AVL56_RS11290 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS11290 PF08448 PAS fold AVL56_RS11300 PF05987 Bacterial protein of unknown function (DUF898) AVL56_RS11305 PF00312 Ribosomal protein S15 AVL56_RS11310 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVL56_RS11310 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVL56_RS11310 PF09157 Pseudouridine synthase II TruB, C-terminal AVL56_RS11315 PF02033 Ribosome-binding factor A AVL56_RS11320 PF04760 Translation initiation factor IF-2, N-terminal region AVL56_RS11320 PF08364 Bacterial translation initiation factor IF-2 associated region AVL56_RS11320 PF11987 Translation-initiation factor 2 AVL56_RS11320 PF00009 Elongation factor Tu GTP binding domain AVL56_RS11325 PF13184 NusA-like KH domain AVL56_RS11325 PF08529 NusA N-terminal domain AVL56_RS11325 PF00575 S1 RNA binding domain AVL56_RS11330 PF17384 RimP C-terminal SH3 domain AVL56_RS11330 PF02576 RimP N-terminal domain AVL56_RS11335 PF00072 Response regulator receiver domain AVL56_RS11340 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS11340 PF01627 Hpt domain AVL56_RS11340 PF00072 Response regulator receiver domain AVL56_RS11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS11355 PF01329 Pterin 4 alpha carbinolamine dehydratase AVL56_RS11360 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS11360 PF00593 TonB dependent receptor AVL56_RS11365 PF00924 Mechanosensitive ion channel AVL56_RS11385 PF00924 Mechanosensitive ion channel AVL56_RS11385 PF05552 Conserved TM helix AVL56_RS11390 PF01575 MaoC like domain AVL56_RS11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS11395 PF03466 LysR substrate binding domain AVL56_RS11405 PF01232 Mannitol dehydrogenase Rossmann domain AVL56_RS11405 PF08125 Mannitol dehydrogenase C-terminal domain AVL56_RS11415 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS11420 PF04198 Putative sugar-binding domain AVL56_RS11430 PF00561 alpha/beta hydrolase fold AVL56_RS11435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS11435 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS11435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS11435 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVL56_RS11440 PF02803 Thiolase, C-terminal domain AVL56_RS11440 PF00108 Thiolase, N-terminal domain AVL56_RS11445 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS11445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVL56_RS11445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVL56_RS11450 PF00561 alpha/beta hydrolase fold AVL56_RS11470 PF00107 Zinc-binding dehydrogenase AVL56_RS11470 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS11480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS11480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS11480 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS11490 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS11490 PF00593 TonB dependent receptor AVL56_RS11510 PF06969 HemN C-terminal domain AVL56_RS11510 PF04055 Radical SAM superfamily AVL56_RS11515 PF03459 TOBE domain AVL56_RS11515 PF00005 ABC transporter AVL56_RS11520 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS11530 PF02391 MoaE protein AVL56_RS11535 PF02597 ThiS family AVL56_RS11540 PF01967 MoaC family AVL56_RS11545 PF00994 Probable molybdopterin binding domain AVL56_RS11550 PF00899 ThiF family AVL56_RS11700 PF01627 Hpt domain AVL56_RS11700 PF00672 HAMP domain AVL56_RS11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS11700 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS11700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL56_RS11700 PF00072 Response regulator receiver domain AVL56_RS11710 PF00155 Aminotransferase class I and II AVL56_RS11715 PF03435 Saccharopine dehydrogenase NADP binding domain AVL56_RS11730 PF00155 Aminotransferase class I and II AVL56_RS11745 PF13538 UvrD-like helicase C-terminal domain AVL56_RS11750 PF13361 UvrD-like helicase C-terminal domain AVL56_RS11750 PF00580 UvrD/REP helicase N-terminal domain AVL56_RS11750 PF12705 PD-(D/E)XK nuclease superfamily AVL56_RS11755 PF17946 RecC C-terminal domain AVL56_RS11765 PF00501 AMP-binding enzyme AVL56_RS11770 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS11770 PF00563 EAL domain AVL56_RS11770 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS11775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVL56_RS11775 PF12706 Beta-lactamase superfamily domain AVL56_RS11775 PF17770 Ribonuclease J C-terminal domain AVL56_RS11780 PF04337 Protein of unknown function, DUF480 AVL56_RS11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS11795 PF03466 LysR substrate binding domain AVL56_RS11815 PF01022 Bacterial regulatory protein, arsR family AVL56_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS11825 PF03466 LysR substrate binding domain AVL56_RS11835 PF02954 Bacterial regulatory protein, Fis family AVL56_RS11835 PF00072 Response regulator receiver domain AVL56_RS11835 PF00158 Sigma-54 interaction domain AVL56_RS11845 PF08446 PAS fold AVL56_RS11845 PF00360 Phytochrome region AVL56_RS11845 PF01590 GAF domain AVL56_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS11845 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS11850 PF00072 Response regulator receiver domain AVL56_RS11855 PF00072 Response regulator receiver domain AVL56_RS11855 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS11855 PF09308 LuxQ, periplasmic AVL56_RS11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS11885 PF07043 Protein of unknown function (DUF1328) AVL56_RS11905 PF07023 Protein of unknown function (DUF1315) AVL56_RS11915 PF01235 Sodium:alanine symporter family AVL56_RS11920 PF00246 Zinc carboxypeptidase AVL56_RS11920 PF18027 Cytosolic carboxypeptidase N-terminal domain AVL56_RS11925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVL56_RS11925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVL56_RS11935 PF01641 SelR domain AVL56_RS11940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL56_RS11940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVL56_RS11945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVL56_RS11945 PF00128 Alpha amylase, catalytic domain AVL56_RS11950 PF00128 Alpha amylase, catalytic domain AVL56_RS11950 PF02806 Alpha amylase, C-terminal all-beta domain AVL56_RS11950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVL56_RS11955 PF02446 4-alpha-glucanotransferase AVL56_RS11960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVL56_RS11960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVL56_RS11965 PF01263 Aldose 1-epimerase AVL56_RS11970 PF01081 KDPG and KHG aldolase AVL56_RS11975 PF02685 Glucokinase AVL56_RS11980 PF00920 Dehydratase family AVL56_RS11985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AVL56_RS11990 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVL56_RS11990 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVL56_RS11995 PF01380 SIS domain AVL56_RS11995 PF01418 Helix-turn-helix domain, rpiR family AVL56_RS12000 PF00224 Pyruvate kinase, barrel domain AVL56_RS12000 PF02887 Pyruvate kinase, alpha/beta domain AVL56_RS12005 PF01048 Phosphorylase superfamily AVL56_RS12050 PF00672 HAMP domain AVL56_RS12050 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS12055 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS12055 PF00072 Response regulator receiver domain AVL56_RS12080 PF09347 Domain of unknown function (DUF1989) AVL56_RS12095 PF04962 KduI/IolB family AVL56_RS12100 PF03480 Bacterial extracellular solute-binding protein, family 7 AVL56_RS12110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVL56_RS12115 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS12120 PF08666 SAF domain AVL56_RS12120 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVL56_RS12125 PF02614 Glucuronate isomerase AVL56_RS12130 PF01232 Mannitol dehydrogenase Rossmann domain AVL56_RS12130 PF08125 Mannitol dehydrogenase C-terminal domain AVL56_RS12135 PF00294 pfkB family carbohydrate kinase AVL56_RS12140 PF13472 GDSL-like Lipase/Acylhydrolase family AVL56_RS12150 PF07470 Glycosyl Hydrolase Family 88 AVL56_RS12155 PF00295 Glycosyl hydrolases family 28 AVL56_RS12160 PF01095 Pectinesterase AVL56_RS12165 PF09456 RcsC Alpha-Beta-Loop (ABL) AVL56_RS12165 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS12165 PF00072 Response regulator receiver domain AVL56_RS12165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS12180 PF04231 Endonuclease I AVL56_RS12185 PF01433 Peptidase family M1 domain AVL56_RS12185 PF11838 ERAP1-like C-terminal domain AVL56_RS12190 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS12210 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS12215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL56_RS12215 PF13378 Enolase C-terminal domain-like AVL56_RS12220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL56_RS12220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL56_RS12235 PF00563 EAL domain AVL56_RS12235 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS12235 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS12250 PF12804 MobA-like NTP transferase domain AVL56_RS12260 PF01625 Peptide methionine sulfoxide reductase AVL56_RS12265 PF02566 OsmC-like protein AVL56_RS12275 PF00080 Copper/zinc superoxide dismutase (SODC) AVL56_RS12280 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS12290 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS12290 PF00072 Response regulator receiver domain AVL56_RS12295 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS12295 PF00672 HAMP domain AVL56_RS12310 PF00881 Nitroreductase family AVL56_RS12320 PF01979 Amidohydrolase family AVL56_RS12325 PF01156 Inosine-uridine preferring nucleoside hydrolase AVL56_RS12330 PF07690 Major Facilitator Superfamily AVL56_RS12335 PF02112 cAMP phosphodiesterases class-II AVL56_RS12340 PF01266 FAD dependent oxidoreductase AVL56_RS12355 PF00672 HAMP domain AVL56_RS12355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS12365 PF00199 Catalase AVL56_RS12365 PF06628 Catalase-related immune-responsive AVL56_RS12375 PF01145 SPFH domain / Band 7 family AVL56_RS12395 PF00881 Nitroreductase family AVL56_RS12415 PF00939 Sodium:sulfate symporter transmembrane region AVL56_RS12420 PF00692 dUTPase AVL56_RS12425 PF10609 NUBPL iron-transfer P-loop NTPase AVL56_RS12430 PF01588 Putative tRNA binding domain AVL56_RS12430 PF09334 tRNA synthetases class I (M) AVL56_RS12430 PF08264 Anticodon-binding domain of tRNA AVL56_RS12435 PF08241 Methyltransferase domain AVL56_RS12440 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVL56_RS12440 PF00753 Metallo-beta-lactamase superfamily AVL56_RS12445 PF01464 Transglycosylase SLT domain AVL56_RS12445 PF01476 LysM domain AVL56_RS12455 PF00593 TonB dependent receptor AVL56_RS12455 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS12460 PF09190 DALR domain AVL56_RS12460 PF01406 tRNA synthetases class I (C) catalytic domain AVL56_RS12465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVL56_RS12470 PF00149 Calcineurin-like phosphoesterase AVL56_RS12480 PF15975 Flotillin AVL56_RS12480 PF01145 SPFH domain / Band 7 family AVL56_RS12500 PF06480 FtsH Extracellular AVL56_RS12500 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS12500 PF17862 AAA+ lid domain AVL56_RS12500 PF01434 Peptidase family M41 AVL56_RS12505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVL56_RS12505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVL56_RS12510 PF00941 FAD binding domain in molybdopterin dehydrogenase AVL56_RS12510 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVL56_RS12515 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS12515 PF01799 [2Fe-2S] binding domain AVL56_RS12520 PF05426 Alginate lyase AVL56_RS12520 PF07940 Heparinase II/III-like protein AVL56_RS12525 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS12525 PF00107 Zinc-binding dehydrogenase AVL56_RS12535 PF04336 Acyl carrier protein phosphodiesterase AVL56_RS12540 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AVL56_RS12550 PF00156 Phosphoribosyl transferase domain AVL56_RS12555 PF02674 Colicin V production protein AVL56_RS12560 PF05036 Sporulation related domain AVL56_RS12565 PF08245 Mur ligase middle domain AVL56_RS12565 PF02875 Mur ligase family, glutamate ligase domain AVL56_RS12570 PF01039 Carboxyl transferase domain AVL56_RS12570 PF17848 Acetyl-coA carboxylase zinc finger domain AVL56_RS12575 PF01416 tRNA pseudouridine synthase AVL56_RS12585 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVL56_RS12585 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVL56_RS12590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL56_RS12590 PF11890 Domain of unknown function (DUF3410) AVL56_RS12590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL56_RS12595 PF00596 Class II Aldolase and Adducin N-terminal domain AVL56_RS12605 PF00109 Beta-ketoacyl synthase, N-terminal domain AVL56_RS12605 PF02801 Beta-ketoacyl synthase, C-terminal domain AVL56_RS12610 PF08448 PAS fold AVL56_RS12610 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS12615 PF01266 FAD dependent oxidoreductase AVL56_RS12615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVL56_RS12645 PF04315 Elongation factor P hydroxylase AVL56_RS12665 PF00970 Oxidoreductase FAD-binding domain AVL56_RS12665 PF00175 Oxidoreductase NAD-binding domain AVL56_RS12665 PF00042 Globin AVL56_RS12670 PF00487 Fatty acid desaturase AVL56_RS12690 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS12690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL56_RS12695 PF00378 Enoyl-CoA hydratase/isomerase AVL56_RS12700 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS12700 PF02909 Tetracyclin repressor-like, C-terminal domain AVL56_RS12705 PF00732 GMC oxidoreductase AVL56_RS12705 PF05199 GMC oxidoreductase AVL56_RS12715 PF06974 Protein of unknown function (DUF1298) AVL56_RS12715 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AVL56_RS12720 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS12725 PF04286 Protein of unknown function (DUF445) AVL56_RS12755 PF00326 Prolyl oligopeptidase family AVL56_RS12755 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AVL56_RS12760 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS12760 PF07840 FadR C-terminal domain AVL56_RS12765 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AVL56_RS12770 PF02600 Disulfide bond formation protein DsbB AVL56_RS12775 PF13302 Acetyltransferase (GNAT) domain AVL56_RS12780 PF03692 Putative zinc- or iron-chelating domain AVL56_RS12785 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVL56_RS12795 PF05166 YcgL domain AVL56_RS12800 PF01612 3'-5' exonuclease AVL56_RS12800 PF00570 HRDC domain AVL56_RS12805 PF00501 AMP-binding enzyme AVL56_RS12805 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS12810 PF12697 Alpha/beta hydrolase family AVL56_RS12825 PF00814 Glycoprotease family AVL56_RS12830 PF13307 Helicase C-terminal domain AVL56_RS12830 PF06733 DEAD_2 AVL56_RS12835 PF00128 Alpha amylase, catalytic domain AVL56_RS12890 PF01634 ATP phosphoribosyltransferase AVL56_RS12890 PF08029 HisG, C-terminal domain AVL56_RS12895 PF00815 Histidinol dehydrogenase AVL56_RS12900 PF00155 Aminotransferase class I and II AVL56_RS12905 PF00475 Imidazoleglycerol-phosphate dehydratase AVL56_RS12910 PF00117 Glutamine amidotransferase class-I AVL56_RS12915 PF00977 Histidine biosynthesis protein AVL56_RS12920 PF00977 Histidine biosynthesis protein AVL56_RS12925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVL56_RS12925 PF01502 Phosphoribosyl-AMP cyclohydrolase AVL56_RS12935 PF00106 short chain dehydrogenase AVL56_RS12945 PF00501 AMP-binding enzyme AVL56_RS12955 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AVL56_RS12965 PF00535 Glycosyl transferase family 2 AVL56_RS12985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS12985 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS12985 PF08521 Two-component sensor kinase N-terminal AVL56_RS12990 PF00072 Response regulator receiver domain AVL56_RS12990 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS12995 PF00753 Metallo-beta-lactamase superfamily AVL56_RS13000 PF10502 Signal peptidase, peptidase S26 AVL56_RS13005 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS13005 PF00593 TonB dependent receptor AVL56_RS13015 PF05191 Adenylate kinase, active site lid AVL56_RS13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS13020 PF00183 Hsp90 protein AVL56_RS13025 PF13662 Toprim domain AVL56_RS13025 PF02132 RecR protein AVL56_RS13045 PF02575 YbaB/EbfC DNA-binding family AVL56_RS13050 PF12169 DNA polymerase III subunits gamma and tau domain III AVL56_RS13050 PF12170 DNA polymerase III tau subunit V interacting with alpha AVL56_RS13055 PF00156 Phosphoribosyl transferase domain AVL56_RS13065 PF05114 Protein of unknown function (DUF692) AVL56_RS13075 PF00400 WD domain, G-beta repeat AVL56_RS13075 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AVL56_RS13085 PF00563 EAL domain AVL56_RS13085 PF00360 Phytochrome region AVL56_RS13085 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS13085 PF01590 GAF domain AVL56_RS13120 PF01066 CDP-alcohol phosphatidyltransferase AVL56_RS13140 PF02861 Clp amino terminal domain, pathogenicity island component AVL56_RS13140 PF10431 C-terminal, D2-small domain, of ClpB protein AVL56_RS13140 PF07724 AAA domain (Cdc48 subfamily) AVL56_RS13140 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS13140 PF17871 AAA lid domain AVL56_RS13145 PF02578 Multi-copper polyphenol oxidoreductase laccase AVL56_RS13150 PF00849 RNA pseudouridylate synthase AVL56_RS13150 PF01479 S4 domain AVL56_RS13155 PF13525 Outer membrane lipoprotein AVL56_RS13165 PF04542 Sigma-70 region 2 AVL56_RS13165 PF04545 Sigma-70, region 4 AVL56_RS13180 PF00106 short chain dehydrogenase AVL56_RS13185 PF01593 Flavin containing amine oxidoreductase AVL56_RS13200 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVL56_RS13200 PF00691 OmpA family AVL56_RS13205 PF01618 MotA/TolQ/ExbB proton channel family AVL56_RS13210 PF02609 Exonuclease VII small subunit AVL56_RS13215 PF00348 Polyprenyl synthetase AVL56_RS13220 PF02780 Transketolase, C-terminal domain AVL56_RS13220 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVL56_RS13220 PF02779 Transketolase, pyrimidine binding domain AVL56_RS13225 PF04608 Phosphatidylglycerophosphatase A AVL56_RS13230 PF02769 AIR synthase related protein, C-terminal domain AVL56_RS13230 PF00586 AIR synthase related protein, N-terminal domain AVL56_RS13235 PF01029 NusB family AVL56_RS13240 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVL56_RS13245 PF00925 GTP cyclohydrolase II AVL56_RS13245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVL56_RS13250 PF00677 Lumazine binding domain AVL56_RS13255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVL56_RS13255 PF01872 RibD C-terminal domain AVL56_RS13260 PF03477 ATP cone domain AVL56_RS13265 PF00464 Serine hydroxymethyltransferase AVL56_RS13270 PF14602 Hexapeptide repeat of succinyl-transferase AVL56_RS13270 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVL56_RS13270 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS13275 PF00005 ABC transporter AVL56_RS13275 PF12848 ABC transporter AVL56_RS13285 PF18073 Rubredoxin metal binding domain AVL56_RS13295 PF18429 Domain of unknown function (DUF5609) AVL56_RS13305 PF01026 TatD related DNase AVL56_RS13310 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVL56_RS13310 PF01243 Pyridoxamine 5'-phosphate oxidase AVL56_RS13315 PF01926 50S ribosome-binding GTPase AVL56_RS13315 PF07650 KH domain AVL56_RS13320 PF14622 Ribonuclease-III-like AVL56_RS13320 PF00035 Double-stranded RNA binding motif AVL56_RS13325 PF10502 Signal peptidase, peptidase S26 AVL56_RS13330 PF00009 Elongation factor Tu GTP binding domain AVL56_RS13330 PF03144 Elongation factor Tu domain 2 AVL56_RS13330 PF00679 Elongation factor G C-terminus AVL56_RS13330 PF06421 GTP-binding protein LepA C-terminus AVL56_RS13340 PF17188 MucB/RseB C-terminal domain AVL56_RS13340 PF03888 MucB/RseB N-terminal domain AVL56_RS13350 PF08281 Sigma-70, region 4 AVL56_RS13350 PF04542 Sigma-70 region 2 AVL56_RS13355 PF02910 Fumarate reductase flavoprotein C-term AVL56_RS13355 PF00890 FAD binding domain AVL56_RS13370 PF03937 Flavinator of succinate dehydrogenase AVL56_RS13380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL56_RS13385 PF00543 Nitrogen regulatory protein P-II AVL56_RS13390 PF02540 NAD synthase AVL56_RS13400 PF00114 Pilin (bacterial filament) AVL56_RS13400 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS13450 PF02401 LytB protein AVL56_RS13455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL56_RS13460 PF01252 Signal peptidase (SPase) II AVL56_RS13465 PF00133 tRNA synthetases class I (I, L, M and V) AVL56_RS13465 PF06827 Zinc finger found in FPG and IleRS AVL56_RS13465 PF08264 Anticodon-binding domain of tRNA AVL56_RS13470 PF01687 Riboflavin kinase AVL56_RS13470 PF06574 FAD synthetase AVL56_RS13475 PF03023 Lipid II flippase MurJ AVL56_RS13480 PF01649 Ribosomal protein S20 AVL56_RS13485 PF00106 short chain dehydrogenase AVL56_RS13495 PF00106 short chain dehydrogenase AVL56_RS13500 PF01758 Sodium Bile acid symporter family AVL56_RS13505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS13505 PF03466 LysR substrate binding domain AVL56_RS13525 PF01546 Peptidase family M20/M25/M40 AVL56_RS13525 PF07687 Peptidase dimerisation domain AVL56_RS13535 PF00216 Bacterial DNA-binding protein AVL56_RS13540 PF05362 Lon protease (S16) C-terminal proteolytic domain AVL56_RS13540 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS13540 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVL56_RS13545 PF06689 ClpX C4-type zinc finger AVL56_RS13545 PF10431 C-terminal, D2-small domain, of ClpB protein AVL56_RS13545 PF07724 AAA domain (Cdc48 subfamily) AVL56_RS13550 PF00574 Clp protease AVL56_RS13555 PF05697 Bacterial trigger factor protein (TF) AVL56_RS13555 PF05698 Bacterial trigger factor protein (TF) C-terminus AVL56_RS13555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL56_RS13585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVL56_RS13585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVL56_RS13595 PF01980 tRNA-methyltransferase O AVL56_RS13595 PF18389 TrmO C-terminal domain AVL56_RS13600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVL56_RS13600 PF03129 Anticodon binding domain AVL56_RS13610 PF02253 Phospholipase A1 AVL56_RS13615 PF00850 Histone deacetylase domain AVL56_RS13620 PF02743 Cache domain AVL56_RS13620 PF00672 HAMP domain AVL56_RS13620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS13625 PF01757 Acyltransferase family AVL56_RS13630 PF00958 GMP synthase C terminal domain AVL56_RS13630 PF00117 Glutamine amidotransferase class-I AVL56_RS13630 PF02540 NAD synthase AVL56_RS13635 PF00478 IMP dehydrogenase / GMP reductase domain AVL56_RS13635 PF00571 CBS domain AVL56_RS13640 PF13742 OB-fold nucleic acid binding domain AVL56_RS13640 PF02601 Exonuclease VII, large subunit AVL56_RS13650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVL56_RS13650 PF01926 50S ribosome-binding GTPase AVL56_RS13655 PF13360 PQQ-like domain AVL56_RS13660 PF09976 Tetratricopeptide repeat-like domain AVL56_RS13665 PF13393 Histidyl-tRNA synthetase AVL56_RS13665 PF03129 Anticodon binding domain AVL56_RS13670 PF04551 GcpE protein AVL56_RS13675 PF13464 Domain of unknown function (DUF4115) AVL56_RS13685 PF04055 Radical SAM superfamily AVL56_RS13690 PF00334 Nucleoside diphosphate kinase AVL56_RS13695 PF02657 Fe-S metabolism associated domain AVL56_RS13700 PF01883 Iron-sulfur cluster assembly protein AVL56_RS13705 PF01521 Iron-sulphur cluster biosynthesis AVL56_RS13710 PF00266 Aminotransferase class-V AVL56_RS13715 PF01458 Uncharacterized protein family (UPF0051) AVL56_RS13720 PF00005 ABC transporter AVL56_RS13725 PF01458 Uncharacterized protein family (UPF0051) AVL56_RS13730 PF00266 Aminotransferase class-V AVL56_RS13735 PF02082 Transcriptional regulator AVL56_RS13740 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS13745 PF00588 SpoU rRNA Methylase family AVL56_RS13750 PF00459 Inositol monophosphatase family AVL56_RS13765 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS13765 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS13765 PF00563 EAL domain AVL56_RS13780 PF07549 SecD/SecF GG Motif AVL56_RS13780 PF02355 Protein export membrane protein AVL56_RS13785 PF07549 SecD/SecF GG Motif AVL56_RS13785 PF02355 Protein export membrane protein AVL56_RS13785 PF13721 SecD export protein N-terminal TM region AVL56_RS13790 PF02699 Preprotein translocase subunit AVL56_RS13795 PF01702 Queuine tRNA-ribosyltransferase AVL56_RS13800 PF02547 Queuosine biosynthesis protein AVL56_RS13810 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AVL56_RS13815 PF04012 PspA/IM30 family AVL56_RS13840 PF03738 Glutathionylspermidine synthase preATP-grasp AVL56_RS13855 PF04960 Glutaminase AVL56_RS13860 PF00245 Alkaline phosphatase AVL56_RS13865 PF00072 Response regulator receiver domain AVL56_RS13870 PF00463 Isocitrate lyase family AVL56_RS13875 PF03466 LysR substrate binding domain AVL56_RS13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS13880 PF01274 Malate synthase AVL56_RS13890 PF01370 NAD dependent epimerase/dehydratase family AVL56_RS13915 PF00899 ThiF family AVL56_RS13920 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS13925 PF03552 Cellulose synthase AVL56_RS13925 PF07238 PilZ domain AVL56_RS13925 PF03170 Bacterial cellulose synthase subunit AVL56_RS13925 PF00535 Glycosyl transferase family 2 AVL56_RS13940 PF00534 Glycosyl transferases group 1 AVL56_RS13945 PF13439 Glycosyltransferase Family 4 AVL56_RS13945 PF00534 Glycosyl transferases group 1 AVL56_RS13990 PF00535 Glycosyl transferase family 2 AVL56_RS14010 PF02397 Bacterial sugar transferase AVL56_RS14025 PF13614 AAA domain AVL56_RS14035 PF01471 Putative peptidoglycan binding domain AVL56_RS14035 PF13401 AAA domain AVL56_RS14040 PF01467 Cytidylyltransferase-like AVL56_RS14040 PF00294 pfkB family carbohydrate kinase AVL56_RS14045 PF01541 GIY-YIG catalytic domain AVL56_RS14055 PF03710 Glutamate-ammonia ligase adenylyltransferase AVL56_RS14055 PF08335 GlnD PII-uridylyltransferase AVL56_RS14065 PF03279 Bacterial lipid A biosynthesis acyltransferase AVL56_RS14095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS14095 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS14095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL56_RS14095 PF09317 Domain of unknown function (DUF1974) AVL56_RS14105 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS14105 PF00563 EAL domain AVL56_RS14105 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS14110 PF00265 Thymidine kinase AVL56_RS14120 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS14165 PF01926 50S ribosome-binding GTPase AVL56_RS14170 PF00588 SpoU rRNA Methylase family AVL56_RS14170 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVL56_RS14175 PF00037 4Fe-4S binding domain AVL56_RS14175 PF11953 Domain of unknown function (DUF3470) AVL56_RS14205 PF00069 Protein kinase domain AVL56_RS14205 PF03793 PASTA domain AVL56_RS14215 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AVL56_RS14215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AVL56_RS14215 PF01276 Orn/Lys/Arg decarboxylase, major domain AVL56_RS14235 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS14235 PF00593 TonB dependent receptor AVL56_RS14240 PF03929 PepSY-associated TM region AVL56_RS14245 PF07660 Secretin and TonB N terminus short domain AVL56_RS14245 PF00593 TonB dependent receptor AVL56_RS14245 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS14255 PF05971 RNA methyltransferase AVL56_RS14260 PF00376 MerR family regulatory protein AVL56_RS14260 PF09278 MerR, DNA binding AVL56_RS14275 PF18030 RimK PreATP-grasp domain AVL56_RS14275 PF08443 RimK-like ATP-grasp domain AVL56_RS14285 PF00246 Zinc carboxypeptidase AVL56_RS14290 PF00483 Nucleotidyl transferase AVL56_RS14330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL56_RS14330 PF18158 Adaptive response protein AidB N-terminal domain AVL56_RS14330 PF02770 Acyl-CoA dehydrogenase, middle domain AVL56_RS14340 PF01244 Membrane dipeptidase (Peptidase family M19) AVL56_RS14345 PF00593 TonB dependent receptor AVL56_RS14345 PF07660 Secretin and TonB N terminus short domain AVL56_RS14345 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS14355 PF01738 Dienelactone hydrolase family AVL56_RS14360 PF00578 AhpC/TSA family AVL56_RS14370 PF03969 AFG1-like ATPase AVL56_RS14395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL56_RS14405 PF00881 Nitroreductase family AVL56_RS14410 PF12633 Adenylate cyclase NT domain AVL56_RS14410 PF01295 Adenylate cyclase, class-I AVL56_RS14420 PF03061 Thioesterase superfamily AVL56_RS14425 PF01136 Peptidase family U32 AVL56_RS14425 PF12392 Collagenase AVL56_RS14460 PF00128 Alpha amylase, catalytic domain AVL56_RS14465 PF07690 Major Facilitator Superfamily AVL56_RS14480 PF00266 Aminotransferase class-V AVL56_RS14490 PF03965 Penicillinase repressor AVL56_RS14500 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVL56_RS14505 PF11838 ERAP1-like C-terminal domain AVL56_RS14505 PF01433 Peptidase family M1 domain AVL56_RS14550 PF06481 COX Aromatic Rich Motif AVL56_RS14550 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVL56_RS14555 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVL56_RS14560 PF00510 Cytochrome c oxidase subunit III AVL56_RS14565 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVL56_RS14570 PF01040 UbiA prenyltransferase family AVL56_RS14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS14585 PF03466 LysR substrate binding domain AVL56_RS14595 PF03466 LysR substrate binding domain AVL56_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS14600 PF00106 short chain dehydrogenase AVL56_RS14605 PF01965 DJ-1/PfpI family AVL56_RS14615 PF00743 Flavin-binding monooxygenase-like AVL56_RS14620 PF00561 alpha/beta hydrolase fold AVL56_RS14630 PF00694 Aconitase C-terminal domain AVL56_RS14635 PF00330 Aconitase family (aconitate hydratase) AVL56_RS14640 PF00857 Isochorismatase family AVL56_RS14645 PF02538 Hydantoinase B/oxoprolinase AVL56_RS14650 PF05378 Hydantoinase/oxoprolinase N-terminal region AVL56_RS14650 PF01968 Hydantoinase/oxoprolinase AVL56_RS14655 PF00682 HMGL-like AVL56_RS14660 PF02515 CoA-transferase family III AVL56_RS14665 PF00593 TonB dependent receptor AVL56_RS14665 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS14670 PF06506 Propionate catabolism activator AVL56_RS14670 PF02954 Bacterial regulatory protein, Fis family AVL56_RS14670 PF00158 Sigma-54 interaction domain AVL56_RS14680 PF00593 TonB dependent receptor AVL56_RS14680 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS14700 PF13533 Biotin-lipoyl like AVL56_RS14705 PF01047 MarR family AVL56_RS14710 PF17755 UvrA DNA-binding domain AVL56_RS14715 PF03631 Virulence factor BrkB AVL56_RS14720 PF00271 Helicase conserved C-terminal domain AVL56_RS14720 PF00570 HRDC domain AVL56_RS14720 PF00270 DEAD/DEAH box helicase AVL56_RS14720 PF16124 RecQ zinc-binding AVL56_RS14720 PF09382 RQC domain AVL56_RS14725 PF07152 YaeQ protein AVL56_RS14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS14745 PF03466 LysR substrate binding domain AVL56_RS14755 PF01556 DnaJ C terminal domain AVL56_RS14755 PF00226 DnaJ domain AVL56_RS14780 PF00400 WD domain, G-beta repeat AVL56_RS14780 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AVL56_RS14795 PF00155 Aminotransferase class I and II AVL56_RS14795 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS14815 PF01863 Protein of unknown function DUF45 AVL56_RS14830 PF01043 SecA preprotein cross-linking domain AVL56_RS14830 PF07517 SecA DEAD-like domain AVL56_RS14830 PF02810 SEC-C motif AVL56_RS14830 PF07516 SecA Wing and Scaffold domain AVL56_RS14845 PF03553 Na+/H+ antiporter family AVL56_RS14865 PF07995 Glucose / Sorbosone dehydrogenase AVL56_RS14870 PF12833 Helix-turn-helix domain AVL56_RS14870 PF12852 Cupin AVL56_RS14875 PF00892 EamA-like transporter family AVL56_RS14880 PF06906 Protein of unknown function (DUF1272) AVL56_RS14885 PF00270 DEAD/DEAH box helicase AVL56_RS14885 PF00271 Helicase conserved C-terminal domain AVL56_RS14935 PF07690 Major Facilitator Superfamily AVL56_RS14945 PF00248 Aldo/keto reductase family AVL56_RS14960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL56_RS14960 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL56_RS14985 PF02347 Glycine cleavage system P-protein AVL56_RS14990 PF01597 Glycine cleavage H-protein AVL56_RS14995 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVL56_RS14995 PF01571 Aminomethyltransferase folate-binding domain AVL56_RS15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS15000 PF03466 LysR substrate binding domain AVL56_RS15005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVL56_RS15005 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS15010 PF01306 LacY proton/sugar symporter AVL56_RS15015 PF00251 Glycosyl hydrolases family 32 N-terminal domain AVL56_RS15015 PF08244 Glycosyl hydrolases family 32 C terminal AVL56_RS15020 PF00083 Sugar (and other) transporter AVL56_RS15030 PF00593 TonB dependent receptor AVL56_RS15030 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS15035 PF03150 Di-haem cytochrome c peroxidase AVL56_RS15040 PF01321 Creatinase/Prolidase N-terminal domain AVL56_RS15040 PF00557 Metallopeptidase family M24 AVL56_RS15055 PF01494 FAD binding domain AVL56_RS15060 PF01494 FAD binding domain AVL56_RS15065 PF05195 Aminopeptidase P, N-terminal domain AVL56_RS15065 PF00557 Metallopeptidase family M24 AVL56_RS15070 PF03695 Uncharacterised protein family (UPF0149) AVL56_RS15080 PF00294 pfkB family carbohydrate kinase AVL56_RS15085 PF01156 Inosine-uridine preferring nucleoside hydrolase AVL56_RS15090 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS15090 PF00989 PAS fold AVL56_RS15090 PF13188 PAS domain AVL56_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS15095 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVL56_RS15100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVL56_RS15105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL56_RS15105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL56_RS15105 PF01842 ACT domain AVL56_RS15125 PF06945 Protein of unknown function (DUF1289) AVL56_RS15145 PF00873 AcrB/AcrD/AcrF family AVL56_RS15150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS15155 PF03466 LysR substrate binding domain AVL56_RS15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS15165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS15165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL56_RS15170 PF02817 e3 binding domain AVL56_RS15170 PF00364 Biotin-requiring enzyme AVL56_RS15170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVL56_RS15175 PF00456 Transketolase, thiamine diphosphate binding domain AVL56_RS15175 PF17831 Pyruvate dehydrogenase E1 component middle domain AVL56_RS15180 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS15180 PF07729 FCD domain AVL56_RS15190 PF01510 N-acetylmuramoyl-L-alanine amidase AVL56_RS15200 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVL56_RS15200 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVL56_RS15210 PF00482 Type II secretion system (T2SS), protein F AVL56_RS15215 PF06750 Bacterial Peptidase A24 N-terminal domain AVL56_RS15215 PF01478 Type IV leader peptidase family AVL56_RS15220 PF01121 Dephospho-CoA kinase AVL56_RS15225 PF07072 Cell division protein AVL56_RS15230 PF03884 DNA gyrase inhibitor YacG AVL56_RS15235 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVL56_RS15240 PF00293 NUDIX domain AVL56_RS15245 PF02810 SEC-C motif AVL56_RS15245 PF07516 SecA Wing and Scaffold domain AVL56_RS15245 PF01043 SecA preprotein cross-linking domain AVL56_RS15245 PF07517 SecA DEAD-like domain AVL56_RS15250 PF01551 Peptidase family M23 AVL56_RS15250 PF08525 Opacity-associated protein A N-terminal motif AVL56_RS15250 PF01476 LysM domain AVL56_RS15255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVL56_RS15260 PF12327 FtsZ family, C-terminal domain AVL56_RS15260 PF00091 Tubulin/FtsZ family, GTPase domain AVL56_RS15265 PF02491 SHS2 domain inserted in FTSA AVL56_RS15270 PF08478 POTRA domain, FtsQ-type AVL56_RS15270 PF03799 Cell division protein FtsQ AVL56_RS15275 PF01820 D-ala D-ala ligase N-terminus AVL56_RS15275 PF07478 D-ala D-ala ligase C-terminus AVL56_RS15280 PF08245 Mur ligase middle domain AVL56_RS15280 PF02875 Mur ligase family, glutamate ligase domain AVL56_RS15280 PF01225 Mur ligase family, catalytic domain AVL56_RS15285 PF04101 Glycosyltransferase family 28 C-terminal domain AVL56_RS15285 PF03033 Glycosyltransferase family 28 N-terminal domain AVL56_RS15290 PF01098 Cell cycle protein AVL56_RS15295 PF02875 Mur ligase family, glutamate ligase domain AVL56_RS15295 PF08245 Mur ligase middle domain AVL56_RS15300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVL56_RS15300 PF00953 Glycosyl transferase family 4 AVL56_RS15305 PF08245 Mur ligase middle domain AVL56_RS15305 PF02875 Mur ligase family, glutamate ligase domain AVL56_RS15305 PF01225 Mur ligase family, catalytic domain AVL56_RS15310 PF01225 Mur ligase family, catalytic domain AVL56_RS15310 PF02875 Mur ligase family, glutamate ligase domain AVL56_RS15310 PF08245 Mur ligase middle domain AVL56_RS15315 PF00905 Penicillin binding protein transpeptidase domain AVL56_RS15315 PF03717 Penicillin-binding Protein dimerisation domain AVL56_RS15320 PF04999 Cell division protein FtsL AVL56_RS15325 PF01795 MraW methylase family AVL56_RS15330 PF02381 MraZ protein, putative antitoxin-like AVL56_RS15340 PF01244 Membrane dipeptidase (Peptidase family M19) AVL56_RS15345 PF00873 AcrB/AcrD/AcrF family AVL56_RS15350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL56_RS15370 PF00462 Glutaredoxin AVL56_RS15370 PF08534 Redoxin AVL56_RS15375 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS15390 PF01627 Hpt domain AVL56_RS15390 PF00989 PAS fold AVL56_RS15390 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS15390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS15390 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVL56_RS15390 PF00072 Response regulator receiver domain AVL56_RS15395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVL56_RS15395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVL56_RS15410 PF05552 Conserved TM helix AVL56_RS15410 PF00924 Mechanosensitive ion channel AVL56_RS15415 PF04452 RNA methyltransferase AVL56_RS15420 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVL56_RS15420 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVL56_RS15425 PF02622 Uncharacterized ACR, COG1678 AVL56_RS15430 PF03652 Holliday junction resolvase AVL56_RS15440 PF00437 Type II/IV secretion system protein AVL56_RS15445 PF00437 Type II/IV secretion system protein AVL56_RS15450 PF01168 Alanine racemase, N-terminal domain AVL56_RS15455 PF03807 NADP oxidoreductase coenzyme F420-dependent AVL56_RS15455 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVL56_RS15460 PF02325 YGGT family AVL56_RS15475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS15475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL56_RS15485 PF08787 Alginate lyase AVL56_RS15490 PF01588 Putative tRNA binding domain AVL56_RS15495 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS15495 PF00043 Glutathione S-transferase, C-terminal domain AVL56_RS15500 PF03883 Peroxide stress protein YaaA AVL56_RS15505 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVL56_RS15510 PF00342 Phosphoglucose isomerase AVL56_RS15515 PF03167 Uracil DNA glycosylase superfamily AVL56_RS15520 PF00291 Pyridoxal-phosphate dependent enzyme AVL56_RS15520 PF14821 Threonine synthase N terminus AVL56_RS15525 PF08544 GHMP kinases C terminal AVL56_RS15525 PF00288 GHMP kinases N terminal domain AVL56_RS15530 PF00742 Homoserine dehydrogenase AVL56_RS15530 PF03447 Homoserine dehydrogenase, NAD binding domain AVL56_RS15530 PF00696 Amino acid kinase family AVL56_RS15530 PF01842 ACT domain AVL56_RS15530 PF13840 ACT domain AVL56_RS15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS15535 PF03466 LysR substrate binding domain AVL56_RS15540 PF08240 Alcohol dehydrogenase GroES-like domain AVL56_RS15540 PF00107 Zinc-binding dehydrogenase AVL56_RS15545 PF00072 Response regulator receiver domain AVL56_RS15545 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS15550 PF07730 Histidine kinase AVL56_RS15570 PF01022 Bacterial regulatory protein, arsR family AVL56_RS15580 PF03358 NADPH-dependent FMN reductase AVL56_RS15585 PF01758 Sodium Bile acid symporter family AVL56_RS15590 PF00072 Response regulator receiver domain AVL56_RS15595 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AVL56_RS15600 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS15600 PF00072 Response regulator receiver domain AVL56_RS15605 PF16736 Single Cache-like AVL56_RS15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS15605 PF00989 PAS fold AVL56_RS15605 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS15630 PF03435 Saccharopine dehydrogenase NADP binding domain AVL56_RS15630 PF16653 Saccharopine dehydrogenase C-terminal domain AVL56_RS15635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVL56_RS15645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVL56_RS15650 PF04348 LppC putative lipoprotein AVL56_RS15655 PF02021 Uncharacterised protein family UPF0102 AVL56_RS15660 PF13580 SIS domain AVL56_RS15665 PF04972 BON domain AVL56_RS15670 PF07690 Major Facilitator Superfamily AVL56_RS15685 PF03466 LysR substrate binding domain AVL56_RS15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS15695 PF00893 Small Multidrug Resistance protein AVL56_RS15700 PF07730 Histidine kinase AVL56_RS15705 PF00072 Response regulator receiver domain AVL56_RS15705 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS15710 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS15710 PF00593 TonB dependent receptor AVL56_RS15725 PF00285 Citrate synthase, C-terminal domain AVL56_RS15730 PF00694 Aconitase C-terminal domain AVL56_RS15730 PF00330 Aconitase family (aconitate hydratase) AVL56_RS15735 PF04303 PrpF protein AVL56_RS15740 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS15750 PF13660 Domain of unknown function (DUF4147) AVL56_RS15750 PF05161 MOFRL family AVL56_RS15755 PF00474 Sodium:solute symporter family AVL56_RS15760 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS15760 PF00593 TonB dependent receptor AVL56_RS15785 PF01627 Hpt domain AVL56_RS15785 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVL56_RS15785 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS15785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS15785 PF00072 Response regulator receiver domain AVL56_RS15785 PF00989 PAS fold AVL56_RS15790 PF01493 GXGXG motif AVL56_RS15790 PF01645 Conserved region in glutamate synthase AVL56_RS15790 PF04898 Glutamate synthase central domain AVL56_RS15790 PF00310 Glutamine amidotransferases class-II AVL56_RS15795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVL56_RS15795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS15805 PF01381 Helix-turn-helix AVL56_RS15820 PF01048 Phosphorylase superfamily AVL56_RS15830 PF01497 Periplasmic binding protein AVL56_RS15835 PF00581 Rhodanese-like domain AVL56_RS15850 PF00579 tRNA synthetases class I (W and Y) AVL56_RS15855 PF04225 Opacity-associated protein A LysM-like domain AVL56_RS15855 PF01551 Peptidase family M23 AVL56_RS15860 PF03702 Anhydro-N-acetylmuramic acid kinase AVL56_RS15870 PF07690 Major Facilitator Superfamily AVL56_RS15880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL56_RS15890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL56_RS15895 PF00043 Glutathione S-transferase, C-terminal domain AVL56_RS15895 PF13417 Glutathione S-transferase, N-terminal domain AVL56_RS15900 PF01521 Iron-sulphur cluster biosynthesis AVL56_RS15905 PF03976 Polyphosphate kinase 2 (PPK2) AVL56_RS15910 PF03776 Septum formation topological specificity factor MinE AVL56_RS15915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVL56_RS15920 PF03775 Septum formation inhibitor MinC, C-terminal domain AVL56_RS15920 PF05209 Septum formation inhibitor MinC, N-terminal domain AVL56_RS15925 PF10415 Fumarase C C-terminus AVL56_RS15925 PF00206 Lyase AVL56_RS15945 PF03653 Uncharacterised protein family (UPF0093) AVL56_RS15960 PF01566 Natural resistance-associated macrophage protein AVL56_RS15965 PF00155 Aminotransferase class I and II AVL56_RS15970 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS15970 PF08448 PAS fold AVL56_RS15970 PF13188 PAS domain AVL56_RS15970 PF00072 Response regulator receiver domain AVL56_RS15980 PF00679 Elongation factor G C-terminus AVL56_RS15980 PF00009 Elongation factor Tu GTP binding domain AVL56_RS15980 PF03144 Elongation factor Tu domain 2 AVL56_RS15985 PF00120 Glutamine synthetase, catalytic domain AVL56_RS15985 PF03951 Glutamine synthetase, beta-Grasp domain AVL56_RS15995 PF00989 PAS fold AVL56_RS15995 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS16000 PF02954 Bacterial regulatory protein, Fis family AVL56_RS16000 PF00072 Response regulator receiver domain AVL56_RS16000 PF00158 Sigma-54 interaction domain AVL56_RS16005 PF00072 Response regulator receiver domain AVL56_RS16010 PF01553 Acyltransferase AVL56_RS16015 PF06877 Regulator of ribonuclease activity B AVL56_RS16025 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16025 PF17158 Membrane-associated sensor, integral membrane domain AVL56_RS16035 PF00672 HAMP domain AVL56_RS16035 PF01627 Hpt domain AVL56_RS16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS16035 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS16035 PF00072 Response regulator receiver domain AVL56_RS16035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL56_RS16040 PF08264 Anticodon-binding domain of tRNA AVL56_RS16040 PF00133 tRNA synthetases class I (I, L, M and V) AVL56_RS16040 PF10458 Valyl tRNA synthetase tRNA binding arm AVL56_RS16045 PF04364 DNA polymerase III chi subunit, HolC AVL56_RS16050 PF02789 Cytosol aminopeptidase family, N-terminal domain AVL56_RS16050 PF00883 Cytosol aminopeptidase family, catalytic domain AVL56_RS16055 PF03739 Lipopolysaccharide export system permease LptF/LptG AVL56_RS16060 PF03739 Lipopolysaccharide export system permease LptF/LptG AVL56_RS16070 PF04545 Sigma-70, region 4 AVL56_RS16070 PF04542 Sigma-70 region 2 AVL56_RS16105 PF04183 IucA / IucC family AVL56_RS16105 PF06276 Ferric iron reductase FhuF-like transporter AVL56_RS16110 PF04183 IucA / IucC family AVL56_RS16110 PF06276 Ferric iron reductase FhuF-like transporter AVL56_RS16115 PF00501 AMP-binding enzyme AVL56_RS16115 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS16125 PF01261 Xylose isomerase-like TIM barrel AVL56_RS16140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL56_RS16140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL56_RS16160 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16160 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS16160 PF00563 EAL domain AVL56_RS16165 PF05221 S-adenosyl-L-homocysteine hydrolase AVL56_RS16165 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVL56_RS16180 PF01042 Endoribonuclease L-PSP AVL56_RS16220 PF00557 Metallopeptidase family M24 AVL56_RS16220 PF01321 Creatinase/Prolidase N-terminal domain AVL56_RS16225 PF08448 PAS fold AVL56_RS16225 PF13188 PAS domain AVL56_RS16225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS16225 PF00072 Response regulator receiver domain AVL56_RS16225 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS16235 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS16240 PF00005 ABC transporter AVL56_RS16240 PF08402 TOBE domain AVL56_RS16245 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS16250 PF00528 Binding-protein-dependent transport system inner membrane component AVL56_RS16265 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16265 PF05230 MASE2 domain AVL56_RS16270 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16275 PF00561 alpha/beta hydrolase fold AVL56_RS16280 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS16280 PF07729 FCD domain AVL56_RS16285 PF08787 Alginate lyase AVL56_RS16300 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS16305 PF03150 Di-haem cytochrome c peroxidase AVL56_RS16320 PF08787 Alginate lyase AVL56_RS16325 PF07690 Major Facilitator Superfamily AVL56_RS16330 PF14592 Chondroitinase B AVL56_RS16340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVL56_RS16340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL56_RS16345 PF07883 Cupin domain AVL56_RS16350 PF07690 Major Facilitator Superfamily AVL56_RS16370 PF12773 Double zinc ribbon AVL56_RS16370 PF00498 FHA domain AVL56_RS16405 PF00069 Protein kinase domain AVL56_RS16405 PF00805 Pentapeptide repeats (8 copies) AVL56_RS16410 PF07504 Fungalysin/Thermolysin Propeptide Motif AVL56_RS16410 PF03413 Peptidase propeptide and YPEB domain AVL56_RS16410 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVL56_RS16410 PF01447 Thermolysin metallopeptidase, catalytic domain AVL56_RS16415 PF16485 Protealysin propeptide AVL56_RS16415 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVL56_RS16415 PF01447 Thermolysin metallopeptidase, catalytic domain AVL56_RS16420 PF00498 FHA domain AVL56_RS16420 PF00005 ABC transporter AVL56_RS16420 PF01061 ABC-2 type transporter AVL56_RS16425 PF00270 DEAD/DEAH box helicase AVL56_RS16425 PF00271 Helicase conserved C-terminal domain AVL56_RS16430 PF01081 KDPG and KHG aldolase AVL56_RS16435 PF00294 pfkB family carbohydrate kinase AVL56_RS16440 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS16440 PF07729 FCD domain AVL56_RS16450 PF00924 Mechanosensitive ion channel AVL56_RS16450 PF12794 Mechanosensitive ion channel inner membrane domain 1 AVL56_RS16450 PF12795 Mechanosensitive ion channel porin domain AVL56_RS16460 PF00141 Peroxidase AVL56_RS16470 PF00999 Sodium/hydrogen exchanger family AVL56_RS16470 PF02254 TrkA-N domain AVL56_RS16485 PF03372 Endonuclease/Exonuclease/phosphatase family AVL56_RS16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS16490 PF03466 LysR substrate binding domain AVL56_RS16500 PF01925 Sulfite exporter TauE/SafE AVL56_RS16505 PF00155 Aminotransferase class I and II AVL56_RS16510 PF00072 Response regulator receiver domain AVL56_RS16510 PF08769 Sporulation initiation factor Spo0A C terminal AVL56_RS16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS16520 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS16530 PF00136 DNA polymerase family B AVL56_RS16530 PF03104 DNA polymerase family B, exonuclease domain AVL56_RS16575 PF05958 tRNA (Uracil-5-)-methyltransferase AVL56_RS16580 PF00440 Bacterial regulatory proteins, tetR family AVL56_RS16595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL56_RS16595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS16605 PF03167 Uracil DNA glycosylase superfamily AVL56_RS16610 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16610 PF00563 EAL domain AVL56_RS16610 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS16620 PF01507 Phosphoadenosine phosphosulfate reductase family AVL56_RS16625 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVL56_RS16625 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVL56_RS16630 PF00258 Flavodoxin AVL56_RS16630 PF00667 FAD binding domain AVL56_RS16630 PF00175 Oxidoreductase NAD-binding domain AVL56_RS16635 PF00593 TonB dependent receptor AVL56_RS16635 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS16660 PF04012 PspA/IM30 family AVL56_RS16670 PF01207 Dihydrouridine synthase (Dus) AVL56_RS16690 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS16690 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16690 PF00563 EAL domain AVL56_RS16695 PF00756 Putative esterase AVL56_RS16700 PF01553 Acyltransferase AVL56_RS16705 PF01553 Acyltransferase AVL56_RS16710 PF00924 Mechanosensitive ion channel AVL56_RS16725 PF01370 NAD dependent epimerase/dehydratase family AVL56_RS16730 PF00209 Sodium:neurotransmitter symporter family AVL56_RS16745 PF01625 Peptide methionine sulfoxide reductase AVL56_RS16760 PF00258 Flavodoxin AVL56_RS16770 PF02472 Biopolymer transport protein ExbD/TolR AVL56_RS16780 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AVL56_RS16780 PF13181 Tetratricopeptide repeat AVL56_RS16785 PF01270 Glycosyl hydrolases family 8 AVL56_RS16795 PF03170 Bacterial cellulose synthase subunit AVL56_RS16795 PF00535 Glycosyl transferase family 2 AVL56_RS16795 PF07238 PilZ domain AVL56_RS16810 PF05175 Methyltransferase small domain AVL56_RS16815 PF13460 NAD(P)H-binding AVL56_RS16820 PF00326 Prolyl oligopeptidase family AVL56_RS16820 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AVL56_RS16825 PF08000 Bacterial PH domain AVL56_RS16830 PF08448 PAS fold AVL56_RS16830 PF00563 EAL domain AVL56_RS16830 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS16835 PF00291 Pyridoxal-phosphate dependent enzyme AVL56_RS16840 PF07969 Amidohydrolase family AVL56_RS16845 PF00753 Metallo-beta-lactamase superfamily AVL56_RS16855 PF03466 LysR substrate binding domain AVL56_RS16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS16860 PF13230 Glutamine amidotransferases class-II AVL56_RS16875 PF01037 Lrp/AsnC ligand binding domain AVL56_RS16890 PF00753 Metallo-beta-lactamase superfamily AVL56_RS16890 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVL56_RS16900 PF11798 IMS family HHH motif AVL56_RS16900 PF00817 impB/mucB/samB family AVL56_RS16900 PF11799 impB/mucB/samB family C-terminal domain AVL56_RS16910 PF02424 ApbE family AVL56_RS16915 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL56_RS16915 PF00175 Oxidoreductase NAD-binding domain AVL56_RS16915 PF00970 Oxidoreductase FAD-binding domain AVL56_RS16920 PF02508 Rnf-Nqr subunit, membrane protein AVL56_RS16925 PF02508 Rnf-Nqr subunit, membrane protein AVL56_RS16930 PF04205 FMN-binding domain AVL56_RS16935 PF03116 NQR2, RnfD, RnfE family AVL56_RS16940 PF11973 NQRA C-terminal domain AVL56_RS16940 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AVL56_RS16945 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AVL56_RS16945 PF07055 Enoyl reductase FAD binding domain AVL56_RS16945 PF12241 Trans-2-enoyl-CoA reductase catalytic region AVL56_RS16950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL56_RS16950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AVL56_RS16955 PF00311 Phosphoenolpyruvate carboxylase AVL56_RS16960 PF00141 Peroxidase AVL56_RS16965 PF00056 lactate/malate dehydrogenase, NAD binding domain AVL56_RS16965 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVL56_RS16970 PF01316 Arginine repressor, DNA binding domain AVL56_RS16970 PF02863 Arginine repressor, C-terminal domain AVL56_RS16975 PF00593 TonB dependent receptor AVL56_RS16975 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS16985 PF00593 TonB dependent receptor AVL56_RS17000 PF00485 Phosphoribulokinase / Uridine kinase family AVL56_RS17005 PF01773 Na+ dependent nucleoside transporter N-terminus AVL56_RS17005 PF07670 Nucleoside recognition AVL56_RS17005 PF07662 Na+ dependent nucleoside transporter C-terminus AVL56_RS17020 PF02469 Fasciclin domain AVL56_RS17030 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS17030 PF00072 Response regulator receiver domain AVL56_RS17040 PF01380 SIS domain AVL56_RS17040 PF00571 CBS domain AVL56_RS17045 PF00474 Sodium:solute symporter family AVL56_RS17055 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS17055 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVL56_RS17055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS17065 PF18030 RimK PreATP-grasp domain AVL56_RS17065 PF08443 RimK-like ATP-grasp domain AVL56_RS17075 PF18030 RimK PreATP-grasp domain AVL56_RS17075 PF08443 RimK-like ATP-grasp domain AVL56_RS17085 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS17085 PF00072 Response regulator receiver domain AVL56_RS17090 PF00501 AMP-binding enzyme AVL56_RS17090 PF16177 Acetyl-coenzyme A synthetase N-terminus AVL56_RS17090 PF13193 AMP-binding enzyme C-terminal domain AVL56_RS17100 PF02806 Alpha amylase, C-terminal all-beta domain AVL56_RS17100 PF00128 Alpha amylase, catalytic domain AVL56_RS17105 PF02690 Na+/Pi-cotransporter AVL56_RS17110 PF00248 Aldo/keto reductase family AVL56_RS17125 PF06628 Catalase-related immune-responsive AVL56_RS17125 PF00199 Catalase AVL56_RS17135 PF03144 Elongation factor Tu domain 2 AVL56_RS17135 PF00009 Elongation factor Tu GTP binding domain AVL56_RS17135 PF03143 Elongation factor Tu C-terminal domain AVL56_RS17160 PF03309 Type III pantothenate kinase AVL56_RS17165 PF03099 Biotin/lipoate A/B protein ligase family AVL56_RS17165 PF08279 HTH domain AVL56_RS17165 PF02237 Biotin protein ligase C terminal domain AVL56_RS17170 PF01565 FAD binding domain AVL56_RS17170 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVL56_RS17220 PF00005 ABC transporter AVL56_RS17220 PF00664 ABC transporter transmembrane region AVL56_RS17220 PF03412 Peptidase C39 family AVL56_RS17225 PF03466 LysR substrate binding domain AVL56_RS17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS17235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVL56_RS17235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AVL56_RS17235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVL56_RS17240 PF16363 GDP-mannose 4,6 dehydratase AVL56_RS17245 PF04321 RmlD substrate binding domain AVL56_RS17250 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVL56_RS17255 PF00483 Nucleotidyl transferase AVL56_RS17260 PF00534 Glycosyl transferases group 1 AVL56_RS17260 PF00535 Glycosyl transferase family 2 AVL56_RS17280 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS17280 PF00483 Nucleotidyl transferase AVL56_RS17295 PF00535 Glycosyl transferase family 2 AVL56_RS17320 PF00682 HMGL-like AVL56_RS17320 PF07836 DmpG-like communication domain AVL56_RS17325 PF02348 Cytidylyltransferase AVL56_RS17340 PF16385 Domain of unknown function AVL56_RS17340 PF00884 Sulfatase AVL56_RS17355 PF00535 Glycosyl transferase family 2 AVL56_RS17360 PF00483 Nucleotidyl transferase AVL56_RS17360 PF01050 Mannose-6-phosphate isomerase AVL56_RS17365 PF01196 Ribosomal protein L17 AVL56_RS17370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVL56_RS17370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVL56_RS17370 PF01000 RNA polymerase Rpb3/RpoA insert domain AVL56_RS17375 PF00163 Ribosomal protein S4/S9 N-terminal domain AVL56_RS17375 PF01479 S4 domain AVL56_RS17380 PF00411 Ribosomal protein S11 AVL56_RS17385 PF00416 Ribosomal protein S13/S18 AVL56_RS17390 PF00344 SecY translocase AVL56_RS17395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVL56_RS17400 PF00327 Ribosomal protein L30p/L7e AVL56_RS17405 PF03719 Ribosomal protein S5, C-terminal domain AVL56_RS17405 PF00333 Ribosomal protein S5, N-terminal domain AVL56_RS17410 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVL56_RS17415 PF00347 Ribosomal protein L6 AVL56_RS17420 PF00410 Ribosomal protein S8 AVL56_RS17425 PF00253 Ribosomal protein S14p/S29e AVL56_RS17430 PF00673 ribosomal L5P family C-terminus AVL56_RS17430 PF00281 Ribosomal protein L5 AVL56_RS17435 PF00467 KOW motif AVL56_RS17435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVL56_RS17440 PF00238 Ribosomal protein L14p/L23e AVL56_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS17445 PF09308 LuxQ, periplasmic AVL56_RS17445 PF00072 Response regulator receiver domain AVL56_RS17445 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS17455 PF00082 Subtilase family AVL56_RS17455 PF05922 Peptidase inhibitor I9 AVL56_RS17460 PF00588 SpoU rRNA Methylase family AVL56_RS17460 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVL56_RS17465 PF08461 Ribonuclease R winged-helix domain AVL56_RS17465 PF08206 Ribonuclease B OB domain AVL56_RS17465 PF00575 S1 RNA binding domain AVL56_RS17465 PF17876 Cold shock domain AVL56_RS17465 PF00773 RNB domain AVL56_RS17470 PF16655 PhoD-like phosphatase, N-terminal domain AVL56_RS17470 PF09423 PhoD-like phosphatase AVL56_RS17480 PF08238 Sel1 repeat AVL56_RS17490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVL56_RS17495 PF00175 Oxidoreductase NAD-binding domain AVL56_RS17495 PF00970 Oxidoreductase FAD-binding domain AVL56_RS17500 PF04389 Peptidase family M28 AVL56_RS17520 PF01654 Cytochrome bd terminal oxidase subunit I AVL56_RS17525 PF02322 Cytochrome bd terminal oxidase subunit II AVL56_RS17530 PF00672 HAMP domain AVL56_RS17530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS17530 PF12729 Four helix bundle sensory module for signal transduction AVL56_RS17535 PF01037 Lrp/AsnC ligand binding domain AVL56_RS17535 PF13404 AsnC-type helix-turn-helix domain AVL56_RS17540 PF00291 Pyridoxal-phosphate dependent enzyme AVL56_RS17550 PF00313 'Cold-shock' DNA-binding domain AVL56_RS17555 PF03109 ABC1 family AVL56_RS17565 PF01209 ubiE/COQ5 methyltransferase family AVL56_RS17575 PF01432 Peptidase family M3 AVL56_RS17580 PF00072 Response regulator receiver domain AVL56_RS17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS17590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL56_RS17590 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS17595 PF00072 Response regulator receiver domain AVL56_RS17595 PF02954 Bacterial regulatory protein, Fis family AVL56_RS17595 PF00158 Sigma-54 interaction domain AVL56_RS17600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS17600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL56_RS17605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVL56_RS17605 PF00384 Molybdopterin oxidoreductase AVL56_RS17605 PF01568 Molydopterin dinucleotide binding domain AVL56_RS17605 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVL56_RS17610 PF07676 WD40-like Beta Propeller Repeat AVL56_RS17610 PF03572 Peptidase family S41 AVL56_RS17610 PF14685 Tricorn protease PDZ domain AVL56_RS17610 PF14684 Tricorn protease C1 domain AVL56_RS17625 PF03412 Peptidase C39 family AVL56_RS17625 PF00005 ABC transporter AVL56_RS17625 PF00664 ABC transporter transmembrane region AVL56_RS17630 PF00072 Response regulator receiver domain AVL56_RS17630 PF00196 Bacterial regulatory proteins, luxR family AVL56_RS17645 PF00004 ATPase family associated with various cellular activities (AAA) AVL56_RS17645 PF07724 AAA domain (Cdc48 subfamily) AVL56_RS17650 PF00227 Proteasome subunit AVL56_RS17655 PF05036 Sporulation related domain AVL56_RS17660 PF17764 3′ DNA-binding domain (3′BD) AVL56_RS17660 PF00271 Helicase conserved C-terminal domain AVL56_RS17660 PF00270 DEAD/DEAH box helicase AVL56_RS17660 PF18074 Primosomal protein N C-terminal domain AVL56_RS17660 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVL56_RS17665 PF01197 Ribosomal protein L31 AVL56_RS17675 PF03949 Malic enzyme, NAD binding domain AVL56_RS17675 PF00390 Malic enzyme, N-terminal domain AVL56_RS17680 PF01340 Met Apo-repressor, MetJ AVL56_RS17685 PF02219 Methylenetetrahydrofolate reductase AVL56_RS17690 PF03631 Virulence factor BrkB AVL56_RS17705 PF00561 alpha/beta hydrolase fold AVL56_RS17710 PF02580 D-Tyr-tRNA(Tyr) deacylase AVL56_RS17715 PF00583 Acetyltransferase (GNAT) family AVL56_RS17715 PF09500 Putative thioesterase (yiiD_Cterm) AVL56_RS17720 PF00140 Sigma-70 factor, region 1.2 AVL56_RS17720 PF04545 Sigma-70, region 4 AVL56_RS17720 PF04542 Sigma-70 region 2 AVL56_RS17725 PF00563 EAL domain AVL56_RS17725 PF08668 HDOD domain AVL56_RS17730 PF08668 HDOD domain AVL56_RS17730 PF00563 EAL domain AVL56_RS17735 PF18075 FtsX extracellular domain AVL56_RS17740 PF00005 ABC transporter AVL56_RS17745 PF02881 SRP54-type protein, helical bundle domain AVL56_RS17745 PF00448 SRP54-type protein, GTPase domain AVL56_RS17760 PF01914 MarC family integral membrane protein AVL56_RS17770 PF12404 Peptidase AVL56_RS17770 PF00883 Cytosol aminopeptidase family, catalytic domain AVL56_RS17775 PF17746 SfsA N-terminal OB domain AVL56_RS17775 PF03749 Sugar fermentation stimulation protein RE domain AVL56_RS17780 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVL56_RS17785 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVL56_RS17790 PF12627 Probable RNA and SrmB- binding site of polymerase A AVL56_RS17790 PF01743 Poly A polymerase head domain AVL56_RS17790 PF12626 Polymerase A arginine-rich C-terminus AVL56_RS17795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVL56_RS17800 PF02548 Ketopantoate hydroxymethyltransferase AVL56_RS17805 PF02569 Pantoate-beta-alanine ligase AVL56_RS17810 PF00282 Pyridoxal-dependent decarboxylase conserved domain AVL56_RS17815 PF12792 CSS motif domain associated with EAL AVL56_RS17815 PF00563 EAL domain AVL56_RS17825 PF01061 ABC-2 type transporter AVL56_RS17830 PF00005 ABC transporter AVL56_RS17835 PF00072 Response regulator receiver domain AVL56_RS17835 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS17840 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS17840 PF00672 HAMP domain AVL56_RS17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS17845 PF00593 TonB dependent receptor AVL56_RS17845 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS17850 PF13640 2OG-Fe(II) oxygenase superfamily AVL56_RS17850 PF18331 PKHD-type hydroxylase C-terminal domain AVL56_RS17865 PF12706 Beta-lactamase superfamily domain AVL56_RS17870 PF03070 TENA/THI-4/PQQC family AVL56_RS17875 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AVL56_RS17880 PF04055 Radical SAM superfamily AVL56_RS17880 PF13186 Iron-sulfur cluster-binding domain AVL56_RS17895 PF00571 CBS domain AVL56_RS17895 PF01595 Cyclin M transmembrane N-terminal domain AVL56_RS17900 PF03773 Predicted permease AVL56_RS17905 PF02554 Carbon starvation protein CstA AVL56_RS17905 PF13722 5TM C-terminal transporter carbon starvation CstA AVL56_RS17915 PF00474 Sodium:solute symporter family AVL56_RS17920 PF07859 alpha/beta hydrolase fold AVL56_RS17930 PF00667 FAD binding domain AVL56_RS17930 PF00258 Flavodoxin AVL56_RS17930 PF00175 Oxidoreductase NAD-binding domain AVL56_RS17955 PF00009 Elongation factor Tu GTP binding domain AVL56_RS17955 PF03144 Elongation factor Tu domain 2 AVL56_RS17955 PF03764 Elongation factor G, domain IV AVL56_RS17955 PF14492 Elongation Factor G, domain II AVL56_RS17955 PF00679 Elongation factor G C-terminus AVL56_RS17960 PF00177 Ribosomal protein S7p/S5e AVL56_RS17965 PF00164 Ribosomal protein S12/S23 AVL56_RS17970 PF04997 RNA polymerase Rpb1, domain 1 AVL56_RS17970 PF04983 RNA polymerase Rpb1, domain 3 AVL56_RS17970 PF00623 RNA polymerase Rpb1, domain 2 AVL56_RS17970 PF04998 RNA polymerase Rpb1, domain 5 AVL56_RS17970 PF05000 RNA polymerase Rpb1, domain 4 AVL56_RS17975 PF04563 RNA polymerase beta subunit AVL56_RS17975 PF04561 RNA polymerase Rpb2, domain 2 AVL56_RS17975 PF04560 RNA polymerase Rpb2, domain 7 AVL56_RS17975 PF04565 RNA polymerase Rpb2, domain 3 AVL56_RS17975 PF10385 RNA polymerase beta subunit external 1 domain AVL56_RS17975 PF00562 RNA polymerase Rpb2, domain 6 AVL56_RS17980 PF00542 Ribosomal protein L7/L12 C-terminal domain AVL56_RS17980 PF16320 Ribosomal protein L7/L12 dimerisation domain AVL56_RS17985 PF00466 Ribosomal protein L10 AVL56_RS17990 PF00687 Ribosomal protein L1p/L10e family AVL56_RS17995 PF00298 Ribosomal protein L11, RNA binding domain AVL56_RS17995 PF03946 Ribosomal protein L11, N-terminal domain AVL56_RS18000 PF02357 Transcription termination factor nusG AVL56_RS18000 PF00467 KOW motif AVL56_RS18005 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVL56_RS18015 PF00664 ABC transporter transmembrane region AVL56_RS18015 PF00005 ABC transporter AVL56_RS18020 PF03737 Aldolase/RraA AVL56_RS18025 PF01431 Peptidase family M13 AVL56_RS18025 PF05649 Peptidase family M13 AVL56_RS18035 PF00270 DEAD/DEAH box helicase AVL56_RS18035 PF00271 Helicase conserved C-terminal domain AVL56_RS18035 PF03880 DbpA RNA binding domain AVL56_RS18040 PF01979 Amidohydrolase family AVL56_RS18050 PF08212 Lipocalin-like domain AVL56_RS18055 PF00248 Aldo/keto reductase family AVL56_RS18060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL56_RS18065 PF00128 Alpha amylase, catalytic domain AVL56_RS18075 PF01227 GTP cyclohydrolase I AVL56_RS18080 PF05643 Putative bacterial lipoprotein (DUF799) AVL56_RS18090 PF03783 Curli production assembly/transport component CsgG AVL56_RS18095 PF04371 Porphyromonas-type peptidyl-arginine deiminase AVL56_RS18100 PF00795 Carbon-nitrogen hydrolase AVL56_RS18115 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AVL56_RS18120 PF00271 Helicase conserved C-terminal domain AVL56_RS18120 PF08494 DEAD/H associated AVL56_RS18120 PF00270 DEAD/DEAH box helicase AVL56_RS18130 PF04679 ATP dependent DNA ligase C terminal region AVL56_RS18130 PF01068 ATP dependent DNA ligase domain AVL56_RS18130 PF04675 DNA ligase N terminus AVL56_RS18140 PF00294 pfkB family carbohydrate kinase AVL56_RS18145 PF00480 ROK family AVL56_RS18155 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS18155 PF00043 Glutathione S-transferase, C-terminal domain AVL56_RS18170 PF00561 alpha/beta hydrolase fold AVL56_RS18185 PF00171 Aldehyde dehydrogenase family AVL56_RS18190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVL56_RS18190 PF00205 Thiamine pyrophosphate enzyme, central domain AVL56_RS18190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVL56_RS18200 PF00762 Ferrochelatase AVL56_RS18205 PF03806 AbgT putative transporter family AVL56_RS18210 PF01145 SPFH domain / Band 7 family AVL56_RS18215 PF01145 SPFH domain / Band 7 family AVL56_RS18215 PF12221 Bacterial membrane protein N terminal AVL56_RS18220 PF13167 GTP-binding GTPase N-terminal AVL56_RS18220 PF01926 50S ribosome-binding GTPase AVL56_RS18220 PF16360 GTP-binding GTPase Middle Region AVL56_RS18225 PF17209 Hfq protein AVL56_RS18235 PF08676 MutL C terminal dimerisation domain AVL56_RS18235 PF01119 DNA mismatch repair protein, C-terminal domain AVL56_RS18240 PF01520 N-acetylmuramoyl-L-alanine amidase AVL56_RS18245 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVL56_RS18250 PF01256 Carbohydrate kinase AVL56_RS18250 PF03853 YjeF-related protein N-terminus AVL56_RS18255 PF08331 Domain of unknown function (DUF1730) AVL56_RS18265 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVL56_RS18270 PF00293 NUDIX domain AVL56_RS18270 PF09297 NADH pyrophosphatase zinc ribbon domain AVL56_RS18275 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AVL56_RS18280 PF01475 Ferric uptake regulator family AVL56_RS18290 PF01894 Uncharacterised protein family UPF0047 AVL56_RS18295 PF00691 OmpA family AVL56_RS18295 PF05736 OprF membrane domain AVL56_RS18300 PF00772 DnaB-like helicase N terminal domain AVL56_RS18300 PF03796 DnaB-like helicase C terminal domain AVL56_RS18325 PF03473 MOSC domain AVL56_RS18325 PF03475 3-alpha domain AVL56_RS18335 PF00873 AcrB/AcrD/AcrF family AVL56_RS18340 PF03948 Ribosomal protein L9, C-terminal domain AVL56_RS18340 PF01281 Ribosomal protein L9, N-terminal domain AVL56_RS18345 PF01084 Ribosomal protein S18 AVL56_RS18350 PF01250 Ribosomal protein S6 AVL56_RS18355 PF18698 Histidine kinase sensor domain AVL56_RS18355 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS18355 PF00989 PAS fold AVL56_RS18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS18355 PF00672 HAMP domain AVL56_RS18365 PF08447 PAS fold AVL56_RS18365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS18370 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL56_RS18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS18370 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS18375 PF00672 HAMP domain AVL56_RS18375 PF17200 Single Cache domain 2 AVL56_RS18375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL56_RS18380 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS18390 PF00232 Glycosyl hydrolase family 1 AVL56_RS18400 PF00005 ABC transporter AVL56_RS18405 PF01032 FecCD transport family AVL56_RS18410 PF01497 Periplasmic binding protein AVL56_RS18420 PF00593 TonB dependent receptor AVL56_RS18420 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS18425 PF07690 Major Facilitator Superfamily AVL56_RS18430 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVL56_RS18430 PF14310 Fibronectin type III-like domain AVL56_RS18430 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL56_RS18445 PF03601 Conserved hypothetical protein 698 AVL56_RS18450 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVL56_RS18455 PF00248 Aldo/keto reductase family AVL56_RS18460 PF00392 Bacterial regulatory proteins, gntR family AVL56_RS18460 PF07702 UTRA domain AVL56_RS18475 PF00474 Sodium:solute symporter family AVL56_RS18480 PF01545 Cation efflux family AVL56_RS18500 PF00722 Glycosyl hydrolases family 16 AVL56_RS18515 PF00593 TonB dependent receptor AVL56_RS18515 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS18520 PF00664 ABC transporter transmembrane region AVL56_RS18520 PF00005 ABC transporter AVL56_RS18525 PF00664 ABC transporter transmembrane region AVL56_RS18525 PF00005 ABC transporter AVL56_RS18535 PF02322 Cytochrome bd terminal oxidase subunit II AVL56_RS18540 PF01654 Cytochrome bd terminal oxidase subunit I AVL56_RS18550 PF00072 Response regulator receiver domain AVL56_RS18550 PF00158 Sigma-54 interaction domain AVL56_RS18550 PF02954 Bacterial regulatory protein, Fis family AVL56_RS18585 PF01132 Elongation factor P (EF-P) OB domain AVL56_RS18585 PF08207 Elongation factor P (EF-P) KOW-like domain AVL56_RS18585 PF09285 Elongation factor P, C-terminal AVL56_RS18615 PF13474 SnoaL-like domain AVL56_RS18655 PF05532 CsbD-like AVL56_RS18670 PF08281 Sigma-70, region 4 AVL56_RS18670 PF04542 Sigma-70 region 2 AVL56_RS18675 PF00082 Subtilase family AVL56_RS18675 PF05922 Peptidase inhibitor I9 AVL56_RS18695 PF00472 RF-1 domain AVL56_RS18700 PF08386 TAP-like protein AVL56_RS18700 PF00561 alpha/beta hydrolase fold AVL56_RS18725 PF01292 Prokaryotic cytochrome b561 AVL56_RS18730 PF04264 YceI-like domain AVL56_RS18735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL56_RS18740 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS18740 PF00593 TonB dependent receptor AVL56_RS18750 PF01048 Phosphorylase superfamily AVL56_RS18755 PF03466 LysR substrate binding domain AVL56_RS18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS18760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AVL56_RS18765 PF00107 Zinc-binding dehydrogenase AVL56_RS18765 PF16884 N-terminal domain of oxidoreductase AVL56_RS18770 PF01590 GAF domain AVL56_RS18770 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS18770 PF00360 Phytochrome region AVL56_RS18770 PF00563 EAL domain AVL56_RS18775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS18775 PF00072 Response regulator receiver domain AVL56_RS18775 PF09308 LuxQ, periplasmic AVL56_RS18775 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS18790 PF00296 Luciferase-like monooxygenase AVL56_RS18800 PF00005 ABC transporter AVL56_RS18820 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVL56_RS18820 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVL56_RS18835 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS18835 PF00593 TonB dependent receptor AVL56_RS18840 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVL56_RS18865 PF01380 SIS domain AVL56_RS18870 PF00455 DeoR C terminal sensor domain AVL56_RS18870 PF08220 DeoR-like helix-turn-helix domain AVL56_RS18875 PF14602 Hexapeptide repeat of succinyl-transferase AVL56_RS18875 PF12804 MobA-like NTP transferase domain AVL56_RS18875 PF00132 Bacterial transferase hexapeptide (six repeats) AVL56_RS18885 PF00892 EamA-like transporter family AVL56_RS18890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVL56_RS18890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVL56_RS18895 PF01965 DJ-1/PfpI family AVL56_RS18895 PF12833 Helix-turn-helix domain AVL56_RS18900 PF00144 Beta-lactamase AVL56_RS18915 PF02233 NAD(P) transhydrogenase beta subunit AVL56_RS18920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVL56_RS18925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVL56_RS18925 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVL56_RS18945 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVL56_RS18945 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVL56_RS18955 PF03707 Bacterial signalling protein N terminal repeat AVL56_RS18955 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS18955 PF00563 EAL domain AVL56_RS18960 PF00118 TCP-1/cpn60 chaperonin family AVL56_RS18965 PF00166 Chaperonin 10 Kd subunit AVL56_RS18975 PF11412 Disulphide bond corrector protein DsbC AVL56_RS18975 PF02683 Cytochrome C biogenesis protein transmembrane region AVL56_RS18980 PF01551 Peptidase family M23 AVL56_RS18985 PF01220 Dehydroquinase class II AVL56_RS18990 PF00364 Biotin-requiring enzyme AVL56_RS18995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVL56_RS18995 PF00289 Biotin carboxylase, N-terminal domain AVL56_RS18995 PF02785 Biotin carboxylase C-terminal domain AVL56_RS19015 PF00929 Exonuclease AVL56_RS19015 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVL56_RS19015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVL56_RS19015 PF14579 Helix-hairpin-helix motif AVL56_RS19015 PF11490 DNA polymerase III polC-type N-terminus II AVL56_RS19015 PF02811 PHP domain AVL56_RS19030 PF01355 High potential iron-sulfur protein AVL56_RS19035 PF01425 Amidase AVL56_RS19050 PF01207 Dihydrouridine synthase (Dus) AVL56_RS19055 PF02954 Bacterial regulatory protein, Fis family AVL56_RS19060 PF02142 MGS-like domain AVL56_RS19060 PF01808 AICARFT/IMPCHase bienzyme AVL56_RS19070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVL56_RS19070 PF02844 Phosphoribosylglycinamide synthetase, N domain AVL56_RS19070 PF02843 Phosphoribosylglycinamide synthetase, C domain AVL56_RS19080 PF00520 Ion transport protein AVL56_RS19080 PF00027 Cyclic nucleotide-binding domain AVL56_RS19090 PF00485 Phosphoribulokinase / Uridine kinase family AVL56_RS19095 PF00860 Permease family AVL56_RS19100 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS19100 PF07660 Secretin and TonB N terminus short domain AVL56_RS19100 PF00593 TonB dependent receptor AVL56_RS19115 PF00072 Response regulator receiver domain AVL56_RS19115 PF00486 Transcriptional regulatory protein, C terminal AVL56_RS19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL56_RS19120 PF00672 HAMP domain AVL56_RS19120 PF00512 His Kinase A (phospho-acceptor) domain AVL56_RS19130 PF01293 Phosphoenolpyruvate carboxykinase AVL56_RS19135 PF01430 Hsp33 protein AVL56_RS19140 PF01479 S4 domain AVL56_RS19145 PF11356 Type II secretion system protein C AVL56_RS19150 PF00263 Bacterial type II and III secretion system protein AVL56_RS19150 PF03958 Bacterial type II/III secretion system short domain AVL56_RS19155 PF00437 Type II/IV secretion system protein AVL56_RS19160 PF00482 Type II secretion system (T2SS), protein F AVL56_RS19165 PF08334 Type II secretion system (T2SS), protein G AVL56_RS19165 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS19170 PF12019 Type II transport protein GspH AVL56_RS19170 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS19175 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS19175 PF02501 Type II secretion system (T2SS), protein I AVL56_RS19180 PF11612 Type II secretion system (T2SS), protein J AVL56_RS19180 PF07963 Prokaryotic N-terminal methylation motif AVL56_RS19185 PF03934 Type II secretion system (T2SS), protein K AVL56_RS19190 PF12693 GspL periplasmic domain AVL56_RS19190 PF05134 Type II secretion system (T2SS), protein L AVL56_RS19195 PF04612 Type II secretion system (T2SS), protein M AVL56_RS19205 PF12706 Beta-lactamase superfamily domain AVL56_RS19210 PF00171 Aldehyde dehydrogenase family AVL56_RS19215 PF01931 Protein of unknown function DUF84 AVL56_RS19220 PF13419 Haloacid dehalogenase-like hydrolase AVL56_RS19225 PF00293 NUDIX domain AVL56_RS19230 PF00459 Inositol monophosphatase family AVL56_RS19240 PF00535 Glycosyl transferase family 2 AVL56_RS19245 PF04349 Periplasmic glucan biosynthesis protein, MdoG AVL56_RS19255 PF06794 Uncharacterised protein family (UPF0270) AVL56_RS19260 PF00561 alpha/beta hydrolase fold AVL56_RS19270 PF12848 ABC transporter AVL56_RS19270 PF00005 ABC transporter AVL56_RS19285 PF04102 SlyX AVL56_RS19295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL56_RS19295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AVL56_RS19305 PF03449 Transcription elongation factor, N-terminal AVL56_RS19305 PF01272 Transcription elongation factor, GreA/GreB, C-term AVL56_RS19310 PF17674 HHH domain AVL56_RS19310 PF00575 S1 RNA binding domain AVL56_RS19310 PF09371 Tex-like protein N-terminal domain AVL56_RS19310 PF16921 Tex protein YqgF-like domain AVL56_RS19325 PF00561 alpha/beta hydrolase fold AVL56_RS19330 PF00156 Phosphoribosyl transferase domain AVL56_RS19340 PF01521 Iron-sulphur cluster biosynthesis AVL56_RS19340 PF01106 NifU-like domain AVL56_RS19350 PF01177 Asp/Glu/Hydantoin racemase AVL56_RS19365 PF06445 GyrI-like small molecule binding domain AVL56_RS19370 PF01554 MatE AVL56_RS19385 PF02630 SCO1/SenC AVL56_RS19390 PF01040 UbiA prenyltransferase family AVL56_RS19395 PF02628 Cytochrome oxidase assembly protein AVL56_RS19415 PF00510 Cytochrome c oxidase subunit III AVL56_RS19420 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AVL56_RS19425 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVL56_RS19430 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVL56_RS19430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVL56_RS19435 PF01726 LexA DNA binding domain AVL56_RS19435 PF00717 Peptidase S24-like AVL56_RS19440 PF02899 Phage integrase, N-terminal SAM-like domain AVL56_RS19440 PF00589 Phage integrase family AVL56_RS19470 PF00873 AcrB/AcrD/AcrF family AVL56_RS19475 PF00027 Cyclic nucleotide-binding domain AVL56_RS19475 PF00520 Ion transport protein AVL56_RS19485 PF03616 Sodium/glutamate symporter AVL56_RS19495 PF17151 Periplasmic sensor domain AVL56_RS19495 PF00990 Diguanylate cyclase, GGDEF domain AVL56_RS19525 PF00593 TonB dependent receptor AVL56_RS19525 PF07715 TonB-dependent Receptor Plug Domain AVL56_RS19535 PF01553 Acyltransferase AVL56_RS19540 PF00585 C-terminal regulatory domain of Threonine dehydratase AVL56_RS19540 PF00291 Pyridoxal-phosphate dependent enzyme AVL56_RS19545 PF00920 Dehydratase family AVL56_RS19550 PF01063 Amino-transferase class IV AVL56_RS19555 PF03458 UPF0126 domain AVL56_RS19560 PF01078 Magnesium chelatase, subunit ChlI AVL56_RS19560 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVL56_RS19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL56_RS19565 PF03466 LysR substrate binding domain AVL56_RS19570 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVL56_RS19570 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVL56_RS19575 PF07690 Major Facilitator Superfamily AVL56_RS19585 PF01103 Surface antigen AVL56_RS19585 PF07244 Surface antigen variable number repeat AVL56_RS19585 PF17243 POTRA domain TamA domain 1 AVL56_RS19590 PF04357 TamB, inner membrane protein subunit of TAM complex AVL56_RS19615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL56_RS19615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL56_RS19625 PF00696 Amino acid kinase family AVL56_RS19625 PF01472 PUA domain AVL56_RS19645 PF03109 ABC1 family AVL56_RS19655 PF04116 Fatty acid hydroxylase superfamily AVL56_RS19670 PF01979 Amidohydrolase family AVL56_RS19690 PF06724 Domain of Unknown Function (DUF1206) AVL56_RS19695 PF01206 Sulfurtransferase TusA AVL56_RS19700 PF00156 Phosphoribosyl transferase domain AVL56_RS19705 PF01138 3' exoribonuclease family, domain 1 AVL56_RS19705 PF03725 3' exoribonuclease family, domain 2 AVL56_RS19710 PF08340 Domain of unknown function (DUF1732) AVL56_RS19710 PF03755 YicC-like family, N-terminal region AVL56_RS19725 PF04820 Tryptophan halogenase AVL56_RS19730 PF04820 Tryptophan halogenase AVL56_RS19740 PF00232 Glycosyl hydrolase family 1 AVL56_RS19750 PF00356 Bacterial regulatory proteins, lacI family AVL56_RS19760 PF00691 OmpA family AVL56_RS19760 PF05736 OprF membrane domain AVL56_RS19765 PF01966 HD domain AVL56_RS19780 PF02798 Glutathione S-transferase, N-terminal domain AVL56_RS19780 PF00043 Glutathione S-transferase, C-terminal domain AVL56_RS19795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVL56_RS19795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AVL56_RS19800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL56_RS19800 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVL56_RS19805 PF00231 ATP synthase AVL56_RS19810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL56_RS19810 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVL56_RS19810 PF00306 ATP synthase alpha/beta chain, C terminal domain AVL56_RS19815 PF00213 ATP synthase delta (OSCP) subunit AVL56_RS19820 PF00430 ATP synthase B/B' CF(0) AVL56_RS19825 PF00137 ATP synthase subunit C AVL56_RS19830 PF00119 ATP synthase A chain AVL56_RS19840 PF17762 HTH domain found in ParB protein AVL56_RS19840 PF02195 ParB-like nuclease domain AVL56_RS19845 PF13614 AAA domain AVL56_RS19850 PF02527 rRNA small subunit methyltransferase G AVL56_RS19855 PF01134 Glucose inhibited division protein A AVL56_RS19855 PF13932 GidA associated domain AVL56_RS19870 PF00258 Flavodoxin AVL56_RS19875 PF01926 50S ribosome-binding GTPase AVL56_RS19875 PF10396 GTP-binding protein TrmE N-terminus AVL56_RS19875 PF12631 MnmE helical domain AVL56_RS19880 PF04461 Protein of unknown function (DUF520) AVL56_RS19885 PF02096 60Kd inner membrane protein AVL56_RS19885 PF14849 YidC periplasmic domain AVL56_RS19890 PF00825 Ribonuclease P AVL56_RS19895 PF00468 Ribosomal protein L34