locus-tag class description EP12_RS00005 PF11638 DnaA N-terminal domain EP12_RS00005 PF00308 Bacterial dnaA protein EP12_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix EP12_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EP12_RS00010 PF02767 DNA polymerase III beta subunit, central domain EP12_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EP12_RS00015 PF02463 RecF/RecN/SMC N terminal domain EP12_RS00030 PF05746 DALR anticodon binding domain EP12_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit EP12_RS00035 PF02091 Glycyl-tRNA synthetase alpha subunit EP12_RS00040 PF03352 Methyladenine glycosylase EP12_RS00050 PF04220 Der GTPase activator (YihI) EP12_RS00060 PF00034 Cytochrome c EP12_RS00065 PF01926 50S ribosome-binding GTPase EP12_RS00070 PF00476 DNA polymerase family A EP12_RS00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EP12_RS00070 PF01367 5'-3' exonuclease, C-terminal SAM fold EP12_RS00070 PF01612 3'-5' exonuclease EP12_RS00080 PF02386 Cation transport protein EP12_RS00090 PF01029 NusB family EP12_RS00090 PF01189 16S rRNA methyltransferase RsmB/F EP12_RS00095 PF00551 Formyl transferase EP12_RS00095 PF02911 Formyl transferase, C-terminal domain EP12_RS00100 PF01327 Polypeptide deformylase EP12_RS00105 PF01476 LysM domain EP12_RS00110 PF17782 DprA winged helix domain EP12_RS00110 PF02481 DNA recombination-mediator protein A EP12_RS00115 PF04361 Protein of unknown function (DUF494) EP12_RS00125 PF01300 Telomere recombination EP12_RS00130 PF01218 Coproporphyrinogen III oxidase EP12_RS00145 PF08501 Shikimate dehydrogenase substrate binding domain EP12_RS00145 PF01488 Shikimate / quinate 5-dehydrogenase EP12_RS00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EP12_RS00150 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS00200 PF14579 Helix-hairpin-helix motif EP12_RS00200 PF02811 PHP domain EP12_RS00200 PF01336 OB-fold nucleic acid binding domain EP12_RS00200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EP12_RS00200 PF07733 Bacterial DNA polymerase III alpha NTPase domain EP12_RS00230 PF02225 PA domain EP12_RS00230 PF04389 Peptidase family M28 EP12_RS00235 PF01467 Cytidylyltransferase-like EP12_RS00245 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EP12_RS00255 PF04127 DNA / pantothenate metabolism flavoprotein EP12_RS00255 PF02441 Flavoprotein EP12_RS00260 PF04002 RadC-like JAB domain EP12_RS00280 PF06082 Exopolysaccharide biosynthesis protein YbjH EP12_RS00285 PF00830 Ribosomal L28 family EP12_RS00290 PF00471 Ribosomal protein L33 EP12_RS00300 PF06827 Zinc finger found in FPG and IleRS EP12_RS00300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EP12_RS00300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EP12_RS00315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EP12_RS00330 PF00563 EAL domain EP12_RS00330 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS00330 PF03707 Bacterial signalling protein N terminal repeat EP12_RS00335 PF00155 Aminotransferase class I and II EP12_RS00340 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS00340 PF00107 Zinc-binding dehydrogenase EP12_RS00345 PF00581 Rhodanese-like domain EP12_RS00350 PF01694 Rhomboid family EP12_RS00350 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EP12_RS00360 PF04345 Chorismate lyase EP12_RS00365 PF01040 UbiA prenyltransferase family EP12_RS00370 PF04380 Membrane fusogenic activity EP12_RS00375 PF00580 UvrD/REP helicase N-terminal domain EP12_RS00375 PF13361 UvrD-like helicase C-terminal domain EP12_RS00380 PF00563 EAL domain EP12_RS00380 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS00380 PF03707 Bacterial signalling protein N terminal repeat EP12_RS00385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EP12_RS00425 PF00005 ABC transporter EP12_RS00435 PF07715 TonB-dependent Receptor Plug Domain EP12_RS00435 PF00593 TonB dependent receptor EP12_RS00440 PF07715 TonB-dependent Receptor Plug Domain EP12_RS00440 PF00593 TonB dependent receptor EP12_RS00445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_RS00445 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_RS00445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_RS00450 PF03466 LysR substrate binding domain EP12_RS00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS00455 PF00753 Metallo-beta-lactamase superfamily EP12_RS00460 PF04317 YcjX-like family, DUF463 EP12_RS00475 PF04055 Radical SAM superfamily EP12_RS00475 PF06968 Biotin and Thiamin Synthesis associated domain EP12_RS00480 PF05690 Thiazole biosynthesis protein ThiG EP12_RS00490 PF00899 ThiF family EP12_RS00495 PF02581 Thiamine monophosphate synthase EP12_RS00500 PF01964 Radical SAM ThiC family EP12_RS00500 PF13667 ThiC-associated domain EP12_RS00505 PF07715 TonB-dependent Receptor Plug Domain EP12_RS00505 PF00593 TonB dependent receptor EP12_RS00520 PF00881 Nitroreductase family EP12_RS00520 PF01996 F420-0:Gamma-glutamyl ligase EP12_RS00525 PF01983 Guanylyl transferase CofC like EP12_RS00530 PF01933 Uncharacterised protein family UPF0052 EP12_RS00535 PF04055 Radical SAM superfamily EP12_RS00540 PF04055 Radical SAM superfamily EP12_RS00545 PF08362 YcdC-like protein, C-terminal region EP12_RS00545 PF00440 Bacterial regulatory proteins, tetR family EP12_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS00550 PF03466 LysR substrate binding domain EP12_RS00555 PF00202 Aminotransferase class-III EP12_RS00560 PF00171 Aldehyde dehydrogenase family EP12_RS00565 PF07687 Peptidase dimerisation domain EP12_RS00565 PF01546 Peptidase family M20/M25/M40 EP12_RS00570 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EP12_RS00585 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EP12_RS00590 PF02602 Uroporphyrinogen-III synthase HemD EP12_RS00595 PF03900 Porphobilinogen deaminase, C-terminal domain EP12_RS00595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EP12_RS00600 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS00600 PF00072 Response regulator receiver domain EP12_RS00610 PF00625 Guanylate kinase EP12_RS00615 PF01192 RNA polymerase Rpb6 EP12_RS00620 PF04607 Region found in RelA / SpoT proteins EP12_RS00620 PF02824 TGS domain EP12_RS00620 PF13291 ACT domain EP12_RS00625 PF01042 Endoribonuclease L-PSP EP12_RS00630 PF12105 SpoU, rRNA methylase, C-terminal EP12_RS00630 PF00588 SpoU rRNA Methylase family EP12_RS00635 PF17191 RecG wedge domain EP12_RS00635 PF00271 Helicase conserved C-terminal domain EP12_RS00635 PF00270 DEAD/DEAH box helicase EP12_RS00645 PF08534 Redoxin EP12_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS00665 PF00005 ABC transporter EP12_RS00665 PF08402 TOBE domain EP12_RS00670 PF05552 Conserved TM helix EP12_RS00670 PF00924 Mechanosensitive ion channel EP12_RS00685 PF00593 TonB dependent receptor EP12_RS00700 PF00072 Response regulator receiver domain EP12_RS00700 PF00486 Transcriptional regulatory protein, C terminal EP12_RS00705 PF13181 Tetratricopeptide repeat EP12_RS00710 PF00593 TonB dependent receptor EP12_RS00710 PF07715 TonB-dependent Receptor Plug Domain EP12_RS00715 PF00491 Arginase family EP12_RS00730 PF00491 Arginase family EP12_RS00735 PF00491 Arginase family EP12_RS00740 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS00740 PF18415 Histidine kinase receptor ArcB trans-membrane domain EP12_RS00740 PF01627 Hpt domain EP12_RS00740 PF00989 PAS fold EP12_RS00740 PF00072 Response regulator receiver domain EP12_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS00750 PF02653 Branched-chain amino acid transport system / permease component EP12_RS00755 PF02653 Branched-chain amino acid transport system / permease component EP12_RS00760 PF12399 Branched-chain amino acid ATP-binding cassette transporter EP12_RS00760 PF00005 ABC transporter EP12_RS00765 PF00005 ABC transporter EP12_RS00770 PF01774 UreD urease accessory protein EP12_RS00775 PF00547 Urease, gamma subunit EP12_RS00780 PF00699 Urease beta subunit EP12_RS00785 PF00449 Urease alpha-subunit, N-terminal domain EP12_RS00785 PF01979 Amidohydrolase family EP12_RS00790 PF02814 UreE urease accessory protein, N-terminal domain EP12_RS00790 PF05194 UreE urease accessory protein, C-terminal domain EP12_RS00795 PF01730 UreF EP12_RS00800 PF02492 CobW/HypB/UreG, nucleotide-binding domain EP12_RS00815 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS00825 PF03466 LysR substrate binding domain EP12_RS00825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS00830 PF01810 LysE type translocator EP12_RS00845 PF00529 HlyD membrane-fusion protein of T1SS EP12_RS00845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS00850 PF00873 AcrB/AcrD/AcrF family EP12_RS00860 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EP12_RS00860 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EP12_RS00865 PF00850 Histone deacetylase domain EP12_RS00880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS00880 PF00672 HAMP domain EP12_RS00880 PF12729 Four helix bundle sensory module for signal transduction EP12_RS00890 PF11737 Protein of unknown function (DUF3300) EP12_RS00895 PF00925 GTP cyclohydrolase II EP12_RS00900 PF00563 EAL domain EP12_RS00900 PF08448 PAS fold EP12_RS00900 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS00915 PF09382 RQC domain EP12_RS00915 PF00570 HRDC domain EP12_RS00915 PF16124 RecQ zinc-binding EP12_RS00915 PF00270 DEAD/DEAH box helicase EP12_RS00915 PF00271 Helicase conserved C-terminal domain EP12_RS00920 PF03061 Thioesterase superfamily EP12_RS00925 PF03448 MgtE intracellular N domain EP12_RS00925 PF01769 Divalent cation transporter EP12_RS00925 PF00571 CBS domain EP12_RS00930 PF00892 EamA-like transporter family EP12_RS00935 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS00935 PF00072 Response regulator receiver domain EP12_RS00940 PF00580 UvrD/REP helicase N-terminal domain EP12_RS00940 PF13361 UvrD-like helicase C-terminal domain EP12_RS00945 PF06426 Serine acetyltransferase, N-terminal EP12_RS00945 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS00950 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS00955 PF02899 Phage integrase, N-terminal SAM-like domain EP12_RS00955 PF00589 Phage integrase family EP12_RS00970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EP12_RS00970 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EP12_RS00985 PF01569 PAP2 superfamily EP12_RS00990 PF03737 Aldolase/RraA EP12_RS01000 PF02441 Flavoprotein EP12_RS01005 PF08245 Mur ligase middle domain EP12_RS01005 PF01225 Mur ligase family, catalytic domain EP12_RS01005 PF02875 Mur ligase family, glutamate ligase domain EP12_RS01010 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EP12_RS01015 PF00719 Inorganic pyrophosphatase EP12_RS01040 PF17755 UvrA DNA-binding domain EP12_RS01040 PF17760 UvrA interaction domain EP12_RS01040 PF00005 ABC transporter EP12_RS01045 PF07690 Major Facilitator Superfamily EP12_RS01050 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS01065 PF00356 Bacterial regulatory proteins, lacI family EP12_RS01070 PF01263 Aldose 1-epimerase EP12_RS01075 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EP12_RS01075 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EP12_RS01080 PF08544 GHMP kinases C terminal EP12_RS01080 PF10509 Galactokinase galactose-binding signature EP12_RS01080 PF00288 GHMP kinases N terminal domain EP12_RS01085 PF00474 Sodium:solute symporter family EP12_RS01140 PF02796 Helix-turn-helix domain of resolvase EP12_RS01140 PF00239 Resolvase, N terminal domain EP12_RS01150 PF14490 Helix-hairpin-helix containing domain EP12_RS01150 PF13538 UvrD-like helicase C-terminal domain EP12_RS01150 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EP12_RS01170 PF16875 Glycosyl hydrolase family 36 N-terminal domain EP12_RS01170 PF16874 Glycosyl hydrolase family 36 C-terminal domain EP12_RS01180 PF04820 Tryptophan halogenase EP12_RS01185 PF00474 Sodium:solute symporter family EP12_RS01195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EP12_RS01195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EP12_RS01225 PF04085 rod shape-determining protein MreC EP12_RS01230 PF04093 rod shape-determining protein MreD EP12_RS01235 PF02545 Maf-like protein EP12_RS01240 PF10150 Ribonuclease E/G family EP12_RS01240 PF00575 S1 RNA binding domain EP12_RS01255 PF01523 Putative modulator of DNA gyrase EP12_RS01260 PF04751 Protein of unknown function (DUF615) EP12_RS01265 PF01523 Putative modulator of DNA gyrase EP12_RS01280 PF00072 Response regulator receiver domain EP12_RS01280 PF00486 Transcriptional regulatory protein, C terminal EP12_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS01285 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_RS01285 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS01300 PF02390 Putative methyltransferase EP12_RS01305 PF00113 Enolase, C-terminal TIM barrel domain EP12_RS01305 PF03952 Enolase, N-terminal domain EP12_RS01310 PF00633 Helix-hairpin-helix motif EP12_RS01310 PF00730 HhH-GPD superfamily base excision DNA repair protein EP12_RS01310 PF14815 NUDIX domain EP12_RS01315 PF04362 Bacterial Fe(2+) trafficking EP12_RS01340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EP12_RS01340 PF18766 SWI2/SNF2 ATPase EP12_RS01340 PF11867 Domain of unknown function (DUF3387) EP12_RS01355 PF01420 Type I restriction modification DNA specificity domain EP12_RS01360 PF02384 N-6 DNA Methylase EP12_RS01380 PF01751 Toprim domain EP12_RS01380 PF01131 DNA topoisomerase EP12_RS01380 PF01396 Topoisomerase DNA binding C4 zinc finger EP12_RS01410 PF02899 Phage integrase, N-terminal SAM-like domain EP12_RS01410 PF00589 Phage integrase family EP12_RS01445 PF00529 HlyD membrane-fusion protein of T1SS EP12_RS01445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS01450 PF00873 AcrB/AcrD/AcrF family EP12_RS01455 PF01545 Cation efflux family EP12_RS01455 PF16916 Dimerisation domain of Zinc Transporter EP12_RS01470 PF00884 Sulfatase EP12_RS01470 PF08019 Phosphoethanolamine transferase EptA/EptB EP12_RS01475 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EP12_RS01485 PF00535 Glycosyl transferase family 2 EP12_RS01495 PF00072 Response regulator receiver domain EP12_RS01495 PF00486 Transcriptional regulatory protein, C terminal EP12_RS01540 PF09278 MerR, DNA binding EP12_RS01540 PF00376 MerR family regulatory protein EP12_RS01545 PF00403 Heavy-metal-associated domain EP12_RS01580 PF13520 Amino acid permease EP12_RS01590 PF00394 Multicopper oxidase EP12_RS01590 PF07732 Multicopper oxidase EP12_RS01590 PF07731 Multicopper oxidase EP12_RS01665 PF01266 FAD dependent oxidoreductase EP12_RS01670 PF07715 TonB-dependent Receptor Plug Domain EP12_RS01670 PF00593 TonB dependent receptor EP12_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS01680 PF16750 Sensor domain of 2-component histidine kinase EP12_RS01680 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS01680 PF00672 HAMP domain EP12_RS01685 PF00072 Response regulator receiver domain EP12_RS01685 PF00486 Transcriptional regulatory protein, C terminal EP12_RS01690 PF03466 LysR substrate binding domain EP12_RS01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS01695 PF07690 Major Facilitator Superfamily EP12_RS01695 PF00083 Sugar (and other) transporter EP12_RS01700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS01700 PF00672 HAMP domain EP12_RS01700 PF02743 Cache domain EP12_RS01705 PF00072 Response regulator receiver domain EP12_RS01710 PF02895 Signal transducing histidine kinase, homodimeric domain EP12_RS01710 PF01627 Hpt domain EP12_RS01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS01710 PF01584 CheW-like domain EP12_RS01710 PF09078 CheY binding EP12_RS01715 PF01584 CheW-like domain EP12_RS01720 PF13426 PAS domain EP12_RS01720 PF08447 PAS fold EP12_RS01720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS01725 PF03705 CheR methyltransferase, all-alpha domain EP12_RS01725 PF01739 CheR methyltransferase, SAM binding domain EP12_RS01730 PF03975 CheD chemotactic sensory transduction EP12_RS01735 PF01339 CheB methylesterase EP12_RS01735 PF00072 Response regulator receiver domain EP12_RS01760 PF01258 Prokaryotic dksA/traR C4-type zinc finger EP12_RS01800 PF05199 GMC oxidoreductase EP12_RS01800 PF00732 GMC oxidoreductase EP12_RS01820 PF00248 Aldo/keto reductase family EP12_RS01825 PF08212 Lipocalin-like domain EP12_RS01840 PF00271 Helicase conserved C-terminal domain EP12_RS01840 PF00270 DEAD/DEAH box helicase EP12_RS01840 PF03880 DbpA RNA binding domain EP12_RS01850 PF01431 Peptidase family M13 EP12_RS01850 PF05649 Peptidase family M13 EP12_RS01855 PF03737 Aldolase/RraA EP12_RS01860 PF00080 Copper/zinc superoxide dismutase (SODC) EP12_RS01865 PF08668 HDOD domain EP12_RS01865 PF00563 EAL domain EP12_RS01870 PF00005 ABC transporter EP12_RS01870 PF00664 ABC transporter transmembrane region EP12_RS01880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EP12_RS01885 PF02357 Transcription termination factor nusG EP12_RS01885 PF00467 KOW motif EP12_RS01900 PF00298 Ribosomal protein L11, RNA binding domain EP12_RS01900 PF03946 Ribosomal protein L11, N-terminal domain EP12_RS01905 PF00687 Ribosomal protein L1p/L10e family EP12_RS01910 PF00466 Ribosomal protein L10 EP12_RS01915 PF16320 Ribosomal protein L7/L12 dimerisation domain EP12_RS01915 PF00542 Ribosomal protein L7/L12 C-terminal domain EP12_RS01920 PF04560 RNA polymerase Rpb2, domain 7 EP12_RS01920 PF04563 RNA polymerase beta subunit EP12_RS01920 PF04561 RNA polymerase Rpb2, domain 2 EP12_RS01920 PF04565 RNA polymerase Rpb2, domain 3 EP12_RS01920 PF10385 RNA polymerase beta subunit external 1 domain EP12_RS01920 PF00562 RNA polymerase Rpb2, domain 6 EP12_RS01925 PF00623 RNA polymerase Rpb1, domain 2 EP12_RS01925 PF05000 RNA polymerase Rpb1, domain 4 EP12_RS01925 PF04997 RNA polymerase Rpb1, domain 1 EP12_RS01925 PF04998 RNA polymerase Rpb1, domain 5 EP12_RS01925 PF04983 RNA polymerase Rpb1, domain 3 EP12_RS01930 PF00164 Ribosomal protein S12/S23 EP12_RS01935 PF00177 Ribosomal protein S7p/S5e EP12_RS01975 PF00300 Histidine phosphatase superfamily (branch 1) EP12_RS01980 PF00694 Aconitase C-terminal domain EP12_RS01980 PF00330 Aconitase family (aconitate hydratase) EP12_RS01985 PF00437 Type II/IV secretion system protein EP12_RS01985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EP12_RS01990 PF00338 Ribosomal protein S10p/S20e EP12_RS01995 PF00297 Ribosomal protein L3 EP12_RS02000 PF00573 Ribosomal protein L4/L1 family EP12_RS02005 PF00276 Ribosomal protein L23 EP12_RS02010 PF00181 Ribosomal Proteins L2, RNA binding domain EP12_RS02010 PF03947 Ribosomal Proteins L2, C-terminal domain EP12_RS02015 PF00203 Ribosomal protein S19 EP12_RS02020 PF00237 Ribosomal protein L22p/L17e EP12_RS02025 PF07650 KH domain EP12_RS02025 PF00189 Ribosomal protein S3, C-terminal domain EP12_RS02030 PF00252 Ribosomal protein L16p/L10e EP12_RS02035 PF00831 Ribosomal L29 protein EP12_RS02040 PF00366 Ribosomal protein S17 EP12_RS02045 PF13439 Glycosyltransferase Family 4 EP12_RS02045 PF00534 Glycosyl transferases group 1 EP12_RS02050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EP12_RS02060 PF02080 TrkA-C domain EP12_RS02060 PF00999 Sodium/hydrogen exchanger family EP12_RS02060 PF03471 Transporter associated domain EP12_RS02070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS02070 PF00672 HAMP domain EP12_RS02070 PF02743 Cache domain EP12_RS02075 PF01432 Peptidase family M3 EP12_RS02090 PF00551 Formyl transferase EP12_RS02090 PF01842 ACT domain EP12_RS02110 PF13406 Transglycosylase SLT domain EP12_RS02120 PF00905 Penicillin binding protein transpeptidase domain EP12_RS02120 PF00912 Transglycosylase EP12_RS02120 PF14814 Bifunctional transglycosylase second domain EP12_RS02135 PF12833 Helix-turn-helix domain EP12_RS02150 PF00543 Nitrogen regulatory protein P-II EP12_RS02155 PF00909 Ammonium Transporter Family EP12_RS02165 PF04261 Dyp-type peroxidase family EP12_RS02170 PF00202 Aminotransferase class-III EP12_RS02185 PF00873 AcrB/AcrD/AcrF family EP12_RS02200 PF03989 DNA gyrase C-terminal domain, beta-propeller EP12_RS02200 PF00521 DNA gyrase/topoisomerase IV, subunit A EP12_RS02210 PF03707 Bacterial signalling protein N terminal repeat EP12_RS02210 PF13188 PAS domain EP12_RS02210 PF00563 EAL domain EP12_RS02210 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS02225 PF04958 Arginine N-succinyltransferase beta subunit EP12_RS02230 PF00202 Aminotransferase class-III EP12_RS02240 PF00117 Glutamine amidotransferase class-I EP12_RS02245 PF00579 tRNA synthetases class I (W and Y) EP12_RS02250 PF00834 Ribulose-phosphate 3 epimerase family EP12_RS02270 PF02086 D12 class N6 adenine-specific DNA methyltransferase EP12_RS02280 PF01761 3-dehydroquinate synthase EP12_RS02285 PF01202 Shikimate kinase EP12_RS02290 PF11741 AMIN domain EP12_RS02290 PF00263 Bacterial type II and III secretion system protein EP12_RS02290 PF03958 Bacterial type II/III secretion system short domain EP12_RS02290 PF07660 Secretin and TonB N terminus short domain EP12_RS02305 PF05137 Fimbrial assembly protein (PilN) EP12_RS02310 PF11104 Type IV pilus assembly protein PilM; EP12_RS02315 PF00905 Penicillin binding protein transpeptidase domain EP12_RS02315 PF00912 Transglycosylase EP12_RS02315 PF17092 Penicillin-binding protein OB-like domain EP12_RS02320 PF00390 Malic enzyme, N-terminal domain EP12_RS02320 PF03949 Malic enzyme, NAD binding domain EP12_RS02325 PF02798 Glutathione S-transferase, N-terminal domain EP12_RS02330 PF00199 Catalase EP12_RS02330 PF06628 Catalase-related immune-responsive EP12_RS02350 PF00563 EAL domain EP12_RS02350 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS02350 PF03707 Bacterial signalling protein N terminal repeat EP12_RS02355 PF00696 Amino acid kinase family EP12_RS02355 PF00583 Acetyltransferase (GNAT) family EP12_RS02360 PF14698 Argininosuccinate lyase C-terminal EP12_RS02360 PF00206 Lyase EP12_RS02365 PF00764 Arginosuccinate synthase EP12_RS02370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EP12_RS02370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EP12_RS02375 PF00696 Amino acid kinase family EP12_RS02380 PF01118 Semialdehyde dehydrogenase, NAD binding domain EP12_RS02380 PF02774 Semialdehyde dehydrogenase, dimerisation domain EP12_RS02385 PF02142 MGS-like domain EP12_RS02410 PF00072 Response regulator receiver domain EP12_RS02410 PF00486 Transcriptional regulatory protein, C terminal EP12_RS02420 PF12146 Serine aminopeptidase, S33 EP12_RS02425 PF00588 SpoU rRNA Methylase family EP12_RS02435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EP12_RS02435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EP12_RS02440 PF02556 Preprotein translocase subunit SecB EP12_RS02445 PF00462 Glutaredoxin EP12_RS02450 PF00581 Rhodanese-like domain EP12_RS02455 PF01551 Peptidase family M23 EP12_RS02465 PF04748 Divergent polysaccharide deacetylase EP12_RS02475 PF03009 Glycerophosphoryl diester phosphodiesterase family EP12_RS02485 PF02666 Phosphatidylserine decarboxylase EP12_RS02490 PF03193 RsgA GTPase EP12_RS02495 PF00929 Exonuclease EP12_RS02510 PF00593 TonB dependent receptor EP12_RS02510 PF07715 TonB-dependent Receptor Plug Domain EP12_RS02525 PF00205 Thiamine pyrophosphate enzyme, central domain EP12_RS02525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EP12_RS02525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EP12_RS02530 PF10369 Small subunit of acetolactate synthase EP12_RS02540 PF02416 mttA/Hcf106 family EP12_RS02545 PF02416 mttA/Hcf106 family EP12_RS02560 PF01026 TatD related DNase EP12_RS02565 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS02565 PF07694 5TMR of 5TMR-LYT EP12_RS02570 PF00490 Delta-aminolevulinic acid dehydratase EP12_RS02575 PF02541 Ppx/GppA phosphatase family EP12_RS02580 PF00270 DEAD/DEAH box helicase EP12_RS02580 PF00271 Helicase conserved C-terminal domain EP12_RS02585 PF00085 Thioredoxin EP12_RS02590 PF07497 Rho termination factor, RNA-binding domain EP12_RS02590 PF07498 Rho termination factor, N-terminal domain EP12_RS02590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_RS02595 PF07687 Peptidase dimerisation domain EP12_RS02595 PF01546 Peptidase family M20/M25/M40 EP12_RS02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS02600 PF00072 Response regulator receiver domain EP12_RS02600 PF09308 LuxQ, periplasmic EP12_RS02600 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS02605 PF06965 Na+/H+ antiporter 1 EP12_RS02610 PF00731 AIR carboxylase EP12_RS02615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EP12_RS02615 PF02222 ATP-grasp domain EP12_RS02630 PF00210 Ferritin-like domain EP12_RS02635 PF07995 Glucose / Sorbosone dehydrogenase EP12_RS02650 PF00085 Thioredoxin EP12_RS02655 PF00709 Adenylosuccinate synthetase EP12_RS02660 PF00709 Adenylosuccinate synthetase EP12_RS02665 PF00171 Aldehyde dehydrogenase family EP12_RS02675 PF03553 Na+/H+ antiporter family EP12_RS02680 PF00933 Glycosyl hydrolase family 3 N terminal domain EP12_RS02690 PF07075 Protein of unknown function (DUF1343) EP12_RS02700 PF00842 Alanine racemase, C-terminal domain EP12_RS02700 PF01168 Alanine racemase, N-terminal domain EP12_RS02795 PF00958 GMP synthase C terminal domain EP12_RS02795 PF00117 Glutamine amidotransferase class-I EP12_RS02795 PF03352 Methyladenine glycosylase EP12_RS02795 PF13302 Acetyltransferase (GNAT) domain EP12_RS02795 PF13673 Acetyltransferase (GNAT) domain EP12_RS02825 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EP12_RS02835 PF01979 Amidohydrolase family EP12_RS02860 PF00589 Phage integrase family EP12_RS02860 PF13495 Phage integrase, N-terminal SAM-like domain EP12_RS02865 PF02803 Thiolase, C-terminal domain EP12_RS02865 PF00108 Thiolase, N-terminal domain EP12_RS02870 PF00378 Enoyl-CoA hydratase/isomerase EP12_RS02870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_RS02870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_RS02880 PF00557 Metallopeptidase family M24 EP12_RS02890 PF00348 Polyprenyl synthetase EP12_RS02895 PF00829 Ribosomal prokaryotic L21 protein EP12_RS02900 PF01016 Ribosomal L27 protein EP12_RS02905 PF01926 50S ribosome-binding GTPase EP12_RS02905 PF01018 GTP1/OBG EP12_RS02915 PF09055 Nickel-containing superoxide dismutase EP12_RS02935 PF00186 Dihydrofolate reductase EP12_RS02940 PF04542 Sigma-70 region 2 EP12_RS02940 PF04545 Sigma-70, region 4 EP12_RS02940 PF00140 Sigma-70 factor, region 1.2 EP12_RS02940 PF04539 Sigma-70 region 3 EP12_RS02945 PF01551 Peptidase family M23 EP12_RS02945 PF01476 LysM domain EP12_RS02950 PF09335 SNARE associated Golgi protein EP12_RS02960 PF01975 Survival protein SurE EP12_RS02965 PF01142 tRNA pseudouridine synthase D (TruD) EP12_RS02970 PF02542 YgbB family EP12_RS02975 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EP12_RS02980 PF04977 Septum formation initiator EP12_RS02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS02990 PF00672 HAMP domain EP12_RS02990 PF17200 Single Cache domain 2 EP12_RS02995 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EP12_RS02995 PF14850 DNA-binding domain of Proline dehydrogenase EP12_RS02995 PF01619 Proline dehydrogenase EP12_RS02995 PF00171 Aldehyde dehydrogenase family EP12_RS03000 PF02321 Outer membrane efflux protein EP12_RS03015 PF00486 Transcriptional regulatory protein, C terminal EP12_RS03015 PF00072 Response regulator receiver domain EP12_RS03020 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03045 PF00293 NUDIX domain EP12_RS03050 PF05524 PEP-utilising enzyme, N-terminal EP12_RS03050 PF01590 GAF domain EP12_RS03050 PF02896 PEP-utilising enzyme, TIM barrel domain EP12_RS03050 PF00391 PEP-utilising enzyme, mobile domain EP12_RS03055 PF01925 Sulfite exporter TauE/SafE EP12_RS03060 PF01790 Prolipoprotein diacylglyceryl transferase EP12_RS03070 PF00072 Response regulator receiver domain EP12_RS03080 PF00072 Response regulator receiver domain EP12_RS03080 PF09456 RcsC Alpha-Beta-Loop (ABL) EP12_RS03080 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03085 PF07690 Major Facilitator Superfamily EP12_RS03100 PF00849 RNA pseudouridylate synthase EP12_RS03120 PF10414 Sirohaem synthase dimerisation region EP12_RS03120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_RS03125 PF03880 DbpA RNA binding domain EP12_RS03125 PF00271 Helicase conserved C-terminal domain EP12_RS03125 PF00270 DEAD/DEAH box helicase EP12_RS03125 PF12343 Cold shock protein DEAD box A EP12_RS03145 PF02321 Outer membrane efflux protein EP12_RS03150 PF00293 NUDIX domain EP12_RS03155 PF06853 Protein of unknown function (DUF1249) EP12_RS03165 PF05728 Uncharacterised protein family (UPF0227) EP12_RS03175 PF00563 EAL domain EP12_RS03175 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS03175 PF03707 Bacterial signalling protein N terminal repeat EP12_RS03180 PF08446 PAS fold EP12_RS03180 PF01590 GAF domain EP12_RS03180 PF00360 Phytochrome region EP12_RS03180 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03185 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS03205 PF04055 Radical SAM superfamily EP12_RS03210 PF01132 Elongation factor P (EF-P) OB domain EP12_RS03210 PF08207 Elongation factor P (EF-P) KOW-like domain EP12_RS03210 PF09285 Elongation factor P, C-terminal EP12_RS03215 PF00152 tRNA synthetases class II (D, K and N) EP12_RS03220 PF07715 TonB-dependent Receptor Plug Domain EP12_RS03220 PF00593 TonB dependent receptor EP12_RS03230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EP12_RS03235 PF05175 Methyltransferase small domain EP12_RS03245 PF01722 BolA-like protein EP12_RS03255 PF08376 Nitrate and nitrite sensing EP12_RS03255 PF03861 ANTAR domain EP12_RS03265 PF00916 Sulfate permease family EP12_RS03265 PF01740 STAS domain EP12_RS03270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EP12_RS03270 PF18267 Rubredoxin NAD+ reductase C-terminal domain EP12_RS03270 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS03270 PF04324 BFD-like [2Fe-2S] binding domain EP12_RS03270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EP12_RS03275 PF13806 Rieske-like [2Fe-2S] domain EP12_RS03280 PF01568 Molydopterin dinucleotide binding domain EP12_RS03280 PF00384 Molybdopterin oxidoreductase EP12_RS03280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EP12_RS03280 PF04324 BFD-like [2Fe-2S] binding domain EP12_RS03285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_RS03285 PF10414 Sirohaem synthase dimerisation region EP12_RS03285 PF14824 Sirohaem biosynthesis protein central EP12_RS03290 PF02885 Glycosyl transferase family, helical bundle domain EP12_RS03290 PF00591 Glycosyl transferase family, a/b domain EP12_RS03300 PF00005 ABC transporter EP12_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS03310 PF00005 ABC transporter EP12_RS03320 PF12804 MobA-like NTP transferase domain EP12_RS03330 PF01323 DSBA-like thioredoxin domain EP12_RS03335 PF01636 Phosphotransferase enzyme family EP12_RS03340 PF12801 4Fe-4S binding domain EP12_RS03340 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EP12_RS03340 PF13746 4Fe-4S dicluster domain EP12_RS03370 PF13378 Enolase C-terminal domain-like EP12_RS03370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EP12_RS03375 PF00596 Class II Aldolase and Adducin N-terminal domain EP12_RS03385 PF13533 Biotin-lipoyl like EP12_RS03390 PF00873 AcrB/AcrD/AcrF family EP12_RS03420 PF02743 Cache domain EP12_RS03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS03420 PF00672 HAMP domain EP12_RS03425 PF04545 Sigma-70, region 4 EP12_RS03425 PF00140 Sigma-70 factor, region 1.2 EP12_RS03425 PF03979 Sigma-70 factor, region 1.1 EP12_RS03425 PF04539 Sigma-70 region 3 EP12_RS03425 PF04542 Sigma-70 region 2 EP12_RS03425 PF04546 Sigma-70, non-essential region EP12_RS03430 PF10410 DnaB-helicase binding domain of primase EP12_RS03430 PF08278 DNA primase DnaG DnaB-binding EP12_RS03430 PF01807 CHC2 zinc finger EP12_RS03430 PF08275 DNA primase catalytic core, N-terminal domain EP12_RS03440 PF01165 Ribosomal protein S21 EP12_RS03445 PF00814 Glycoprotease family EP12_RS03450 PF02660 Glycerol-3-phosphate acyltransferase EP12_RS03465 PF02673 Bacitracin resistance protein BacA EP12_RS03470 PF01230 HIT domain EP12_RS03485 PF03594 Benzoate membrane transport protein EP12_RS03490 PF01381 Helix-turn-helix EP12_RS03490 PF07883 Cupin domain EP12_RS03495 PF04381 Putative exonuclease, RdgC EP12_RS03500 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03500 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_RS03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03505 PF00486 Transcriptional regulatory protein, C terminal EP12_RS03505 PF00072 Response regulator receiver domain EP12_RS03510 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03510 PF11808 Phosphate regulon sensor protein PhoR EP12_RS03510 PF00989 PAS fold EP12_RS03515 PF12849 PBP superfamily domain EP12_RS03540 PF01618 MotA/TolQ/ExbB proton channel family EP12_RS03545 PF01618 MotA/TolQ/ExbB proton channel family EP12_RS03550 PF02472 Biopolymer transport protein ExbD/TolR EP12_RS03565 PF09411 Lipid A 3-O-deacylase (PagL) EP12_RS03570 PF00072 Response regulator receiver domain EP12_RS03575 PF00672 HAMP domain EP12_RS03575 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03575 PF01627 Hpt domain EP12_RS03575 PF00072 Response regulator receiver domain EP12_RS03575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EP12_RS03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03580 PF13193 AMP-binding enzyme C-terminal domain EP12_RS03580 PF00501 AMP-binding enzyme EP12_RS03590 PF07995 Glucose / Sorbosone dehydrogenase EP12_RS03595 PF06434 Aconitate hydratase 2 N-terminus EP12_RS03595 PF11791 Aconitate B N-terminal domain EP12_RS03595 PF00330 Aconitase family (aconitate hydratase) EP12_RS03605 PF14743 DNA ligase OB-like domain EP12_RS03605 PF01068 ATP dependent DNA ligase domain EP12_RS03610 PF11791 Aconitate B N-terminal domain EP12_RS03610 PF06434 Aconitate hydratase 2 N-terminus EP12_RS03610 PF00330 Aconitase family (aconitate hydratase) EP12_RS03620 PF01842 ACT domain EP12_RS03620 PF00696 Amino acid kinase family EP12_RS03625 PF00672 HAMP domain EP12_RS03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS03630 PF00149 Calcineurin-like phosphoesterase EP12_RS03635 PF04379 ApaG domain EP12_RS03640 PF00398 Ribosomal RNA adenine dimethylase EP12_RS03645 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EP12_RS03650 PF09312 SurA N-terminal domain EP12_RS03650 PF00639 PPIC-type PPIASE domain EP12_RS03655 PF03968 OstA-like protein EP12_RS03655 PF04453 LPS transport system D EP12_RS03660 PF05099 Tellurite resistance protein TerB EP12_RS03660 PF00226 DnaJ domain EP12_RS03665 PF00589 Phage integrase family EP12_RS03665 PF02899 Phage integrase, N-terminal SAM-like domain EP12_RS03670 PF10411 Disulfide bond isomerase protein N-terminus EP12_RS03670 PF13098 Thioredoxin-like domain EP12_RS03675 PF17768 RecJ OB domain EP12_RS03675 PF02272 DHHA1 domain EP12_RS03675 PF01368 DHH family EP12_RS03690 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EP12_RS03695 PF01648 4'-phosphopantetheinyl transferase superfamily EP12_RS03700 PF05958 tRNA (Uracil-5-)-methyltransferase EP12_RS03705 PF13291 ACT domain EP12_RS03705 PF04607 Region found in RelA / SpoT proteins EP12_RS03705 PF02824 TGS domain EP12_RS03710 PF03819 MazG nucleotide pyrophosphohydrolase domain EP12_RS03720 PF00572 Ribosomal protein L13 EP12_RS03725 PF00380 Ribosomal protein S9/S16 EP12_RS03730 PF08281 Sigma-70, region 4 EP12_RS03730 PF04542 Sigma-70 region 2 EP12_RS03740 PF07715 TonB-dependent Receptor Plug Domain EP12_RS03740 PF00593 TonB dependent receptor EP12_RS03750 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EP12_RS03750 PF00355 Rieske [2Fe-2S] domain EP12_RS03755 PF00032 Cytochrome b(C-terminal)/b6/petD EP12_RS03755 PF00033 Cytochrome b/b6/petB EP12_RS03760 PF02167 Cytochrome C1 family EP12_RS03765 PF02798 Glutathione S-transferase, N-terminal domain EP12_RS03765 PF00043 Glutathione S-transferase, C-terminal domain EP12_RS03770 PF04386 Stringent starvation protein B EP12_RS03785 PF00072 Response regulator receiver domain EP12_RS03785 PF00486 Transcriptional regulatory protein, C terminal EP12_RS03790 PF00571 CBS domain EP12_RS03790 PF03448 MgtE intracellular N domain EP12_RS03790 PF01769 Divalent cation transporter EP12_RS03795 PF00381 PTS HPr component phosphorylation site EP12_RS03800 PF03668 P-loop ATPase protein family EP12_RS03805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EP12_RS03810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EP12_RS03815 PF00309 Sigma-54 factor, Activator interacting domain (AID) EP12_RS03815 PF04963 Sigma-54 factor, core binding domain EP12_RS03815 PF04552 Sigma-54, DNA binding domain EP12_RS03820 PF00005 ABC transporter EP12_RS03820 PF12399 Branched-chain amino acid ATP-binding cassette transporter EP12_RS03840 PF01380 SIS domain EP12_RS03840 PF00571 CBS domain EP12_RS03845 PF01699 Sodium/calcium exchanger protein EP12_RS03850 PF00005 ABC transporter EP12_RS03855 PF02405 Permease MlaE EP12_RS03860 PF02470 MlaD protein EP12_RS03865 PF05494 MlaC protein EP12_RS03875 PF01722 BolA-like protein EP12_RS03880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EP12_RS03885 PF13180 PDZ domain EP12_RS03890 PF13180 PDZ domain EP12_RS03890 PF00595 PDZ domain EP12_RS03900 PF03969 AFG1-like ATPase EP12_RS03905 PF01709 Transcriptional regulator EP12_RS03955 PF07549 SecD/SecF GG Motif EP12_RS03955 PF02355 Protein export membrane protein EP12_RS03960 PF02080 TrkA-C domain EP12_RS03960 PF03471 Transporter associated domain EP12_RS03960 PF00999 Sodium/hydrogen exchanger family EP12_RS03965 PF09308 LuxQ, periplasmic EP12_RS03965 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS03965 PF00072 Response regulator receiver domain EP12_RS03980 PF00465 Iron-containing alcohol dehydrogenase EP12_RS04000 PF00438 S-adenosylmethionine synthetase, N-terminal domain EP12_RS04000 PF02773 S-adenosylmethionine synthetase, C-terminal domain EP12_RS04000 PF02772 S-adenosylmethionine synthetase, central domain EP12_RS04005 PF02779 Transketolase, pyrimidine binding domain EP12_RS04005 PF02780 Transketolase, C-terminal domain EP12_RS04005 PF00456 Transketolase, thiamine diphosphate binding domain EP12_RS04010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EP12_RS04010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EP12_RS04015 PF00162 Phosphoglycerate kinase EP12_RS04020 PF00274 Fructose-bisphosphate aldolase class-I EP12_RS04025 PF02541 Ppx/GppA phosphatase family EP12_RS04030 PF13089 Polyphosphate kinase N-terminal domain EP12_RS04030 PF02503 Polyphosphate kinase middle domain EP12_RS04030 PF17941 Polyphosphate kinase C-terminal domain 1 EP12_RS04030 PF13090 Polyphosphate kinase C-terminal domain 2 EP12_RS04040 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS04045 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS04050 PF00005 ABC transporter EP12_RS04055 PF01895 PhoU domain EP12_RS04060 PF01384 Phosphate transporter family EP12_RS04065 PF00582 Universal stress protein family EP12_RS04070 PF03466 LysR substrate binding domain EP12_RS04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS04080 PF03006 Haemolysin-III related EP12_RS04085 PF01047 MarR family EP12_RS04090 PF02566 OsmC-like protein EP12_RS04100 PF09186 Domain of unknown function (DUF1949) EP12_RS04100 PF01205 Uncharacterized protein family UPF0029 EP12_RS04105 PF08447 PAS fold EP12_RS04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS04105 PF13426 PAS domain EP12_RS04110 PF00149 Calcineurin-like phosphoesterase EP12_RS04110 PF12320 Type 5 capsule protein repressor C-terminal domain EP12_RS04115 PF13476 AAA domain EP12_RS04120 PF03079 ARD/ARD' family EP12_RS04130 PF12146 Serine aminopeptidase, S33 EP12_RS04135 PF12833 Helix-turn-helix domain EP12_RS04135 PF06719 AraC-type transcriptional regulator N-terminus EP12_RS04140 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system EP12_RS04155 PF02798 Glutathione S-transferase, N-terminal domain EP12_RS04155 PF00043 Glutathione S-transferase, C-terminal domain EP12_RS04175 PF01869 BadF/BadG/BcrA/BcrD ATPase family EP12_RS04200 PF01979 Amidohydrolase family EP12_RS04205 PF00924 Mechanosensitive ion channel EP12_RS04240 PF00581 Rhodanese-like domain EP12_RS04245 PF08534 Redoxin EP12_RS04250 PF03942 DTW domain EP12_RS04295 PF03788 LrgA family EP12_RS04300 PF04172 LrgB-like family EP12_RS04305 PF00072 Response regulator receiver domain EP12_RS04330 PF04055 Radical SAM superfamily EP12_RS04330 PF06969 HemN C-terminal domain EP12_RS04335 PF01725 Ham1 family EP12_RS04340 PF00271 Helicase conserved C-terminal domain EP12_RS04340 PF00270 DEAD/DEAH box helicase EP12_RS04345 PF12627 Probable RNA and SrmB- binding site of polymerase A EP12_RS04345 PF01743 Poly A polymerase head domain EP12_RS04350 PF13401 AAA domain EP12_RS04350 PF01471 Putative peptidoglycan binding domain EP12_RS04365 PF00694 Aconitase C-terminal domain EP12_RS04370 PF00330 Aconitase family (aconitate hydratase) EP12_RS04375 PF00180 Isocitrate/isopropylmalate dehydrogenase EP12_RS04380 PF08502 LeuA allosteric (dimerisation) domain EP12_RS04380 PF00682 HMGL-like EP12_RS04395 PF03952 Enolase, N-terminal domain EP12_RS04395 PF00113 Enolase, C-terminal TIM barrel domain EP12_RS04400 PF06418 CTP synthase N-terminus EP12_RS04400 PF00117 Glutamine amidotransferase class-I EP12_RS04410 PF02464 Competence-damaged protein EP12_RS04415 PF00154 recA bacterial DNA recombination protein EP12_RS04425 PF00005 ABC transporter EP12_RS04430 PF12679 ABC-2 family transporter protein EP12_RS04445 PF00005 ABC transporter EP12_RS04450 PF03379 CcmB protein EP12_RS04455 PF01578 Cytochrome C assembly protein EP12_RS04460 PF04995 Heme exporter protein D (CcmD) EP12_RS04465 PF03100 CcmE EP12_RS04470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EP12_RS04470 PF01578 Cytochrome C assembly protein EP12_RS04475 PF08534 Redoxin EP12_RS04480 PF03918 Cytochrome C biogenesis protein EP12_RS04495 PF16363 GDP-mannose 4,6 dehydratase EP12_RS04515 PF00005 ABC transporter EP12_RS04525 PF10531 SLBB domain EP12_RS04525 PF02563 Polysaccharide biosynthesis/export protein EP12_RS04535 PF00953 Glycosyl transferase family 4 EP12_RS04540 PF00535 Glycosyl transferase family 2 EP12_RS04550 PF00483 Nucleotidyl transferase EP12_RS04555 PF10531 SLBB domain EP12_RS04560 PF18324 Hypothetical protein TT1725 EP12_RS04560 PF00180 Isocitrate/isopropylmalate dehydrogenase EP12_RS04575 PF03641 Possible lysine decarboxylase EP12_RS04575 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EP12_RS04575 PF11892 Domain of unknown function (DUF3412) EP12_RS04580 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS04585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EP12_RS04585 PF14489 QueF-like protein EP12_RS04590 PF07348 Syd protein (SUKH-2) EP12_RS04630 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system EP12_RS04635 PF07715 TonB-dependent Receptor Plug Domain EP12_RS04635 PF00593 TonB dependent receptor EP12_RS04675 PF00849 RNA pseudouridylate synthase EP12_RS04680 PF00258 Flavodoxin EP12_RS04685 PF14602 Hexapeptide repeat of succinyl-transferase EP12_RS04685 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EP12_RS04685 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS04690 PF01842 ACT domain EP12_RS04690 PF08335 GlnD PII-uridylyltransferase EP12_RS04690 PF01966 HD domain EP12_RS04690 PF01909 Nucleotidyltransferase domain EP12_RS04695 PF00557 Metallopeptidase family M24 EP12_RS04700 PF00318 Ribosomal protein S2 EP12_RS04705 PF00889 Elongation factor TS EP12_RS04710 PF00696 Amino acid kinase family EP12_RS04715 PF01765 Ribosome recycling factor EP12_RS04720 PF01255 Putative undecaprenyl diphosphate synthase EP12_RS04740 PF07244 Surface antigen variable number repeat EP12_RS04740 PF01103 Surface antigen EP12_RS04745 PF03938 Outer membrane protein (OmpH-like) EP12_RS04750 PF07977 FabA-like domain EP12_RS04755 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EP12_RS04755 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS04760 PF02684 Lipid-A-disaccharide synthetase EP12_RS04765 PF01351 Ribonuclease HII EP12_RS04775 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EP12_RS04780 PF11734 TilS substrate C-terminal domain EP12_RS04780 PF09179 TilS substrate binding domain EP12_RS04780 PF01171 PP-loop family EP12_RS04785 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS04785 PF00563 EAL domain EP12_RS04785 PF03707 Bacterial signalling protein N terminal repeat EP12_RS04790 PF00999 Sodium/hydrogen exchanger family EP12_RS04790 PF02254 TrkA-N domain EP12_RS04790 PF02080 TrkA-C domain EP12_RS04800 PF14437 MafB19-like deaminase EP12_RS04805 PF01464 Transglycosylase SLT domain EP12_RS04805 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_RS04810 PF02769 AIR synthase related protein, C-terminal domain EP12_RS04810 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EP12_RS04810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EP12_RS04815 PF01713 Smr domain EP12_RS04850 PF00072 Response regulator receiver domain EP12_RS04850 PF01584 CheW-like domain EP12_RS04855 PF03705 CheR methyltransferase, all-alpha domain EP12_RS04855 PF01739 CheR methyltransferase, SAM binding domain EP12_RS04860 PF00460 Flagella basal body rod protein EP12_RS04865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_RS04865 PF00460 Flagella basal body rod protein EP12_RS04875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_RS04875 PF00460 Flagella basal body rod protein EP12_RS04875 PF07559 Flagellar basal body protein FlaE EP12_RS04880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_RS04880 PF00460 Flagella basal body rod protein EP12_RS04885 PF00460 Flagella basal body rod protein EP12_RS04885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EP12_RS04890 PF02107 Flagellar L-ring protein EP12_RS04900 PF10135 Rod binding protein EP12_RS04900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EP12_RS04920 PF00669 Bacterial flagellin N-terminal helical region EP12_RS04920 PF00700 Bacterial flagellin C-terminal helical region EP12_RS04920 PF07196 Flagellin hook IN motif EP12_RS04925 PF00669 Bacterial flagellin N-terminal helical region EP12_RS04925 PF00700 Bacterial flagellin C-terminal helical region EP12_RS04925 PF07196 Flagellin hook IN motif EP12_RS04935 PF03646 FlaG protein EP12_RS04940 PF07195 Flagellar hook-associated protein 2 C-terminus EP12_RS04940 PF07196 Flagellin hook IN motif EP12_RS04940 PF02465 Flagellar hook-associated protein 2 N-terminus EP12_RS04945 PF02561 Flagellar protein FliS EP12_RS04955 PF02719 Polysaccharide biosynthesis protein EP12_RS04960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EP12_RS04965 PF02348 Cytidylyltransferase EP12_RS04970 PF03102 NeuB family EP12_RS04970 PF08666 SAF domain EP12_RS05030 PF02350 UDP-N-acetylglucosamine 2-epimerase EP12_RS05035 PF11380 Stealth protein CR2, conserved region 2 EP12_RS05035 PF17102 Stealth protein CR3, conserved region 3 EP12_RS05035 PF17101 Stealth protein CR1, conserved region 1 EP12_RS05045 PF00483 Nucleotidyl transferase EP12_RS05050 PF00266 Aminotransferase class-V EP12_RS05060 PF04991 LicD family EP12_RS05065 PF00550 Phosphopantetheine attachment site EP12_RS05095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EP12_RS05095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EP12_RS05095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EP12_RS05100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EP12_RS05100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_RS05105 PF00551 Formyl transferase EP12_RS05105 PF02911 Formyl transferase, C-terminal domain EP12_RS05110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EP12_RS05115 PF00700 Bacterial flagellin C-terminal helical region EP12_RS05115 PF12445 Flagellin protein EP12_RS05115 PF00669 Bacterial flagellin N-terminal helical region EP12_RS05120 PF06490 Flagellar regulatory protein FleQ EP12_RS05120 PF00158 Sigma-54 interaction domain EP12_RS05120 PF02954 Bacterial regulatory protein, Fis family EP12_RS05125 PF13188 PAS domain EP12_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS05125 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS05130 PF02954 Bacterial regulatory protein, Fis family EP12_RS05130 PF00158 Sigma-54 interaction domain EP12_RS05130 PF00072 Response regulator receiver domain EP12_RS05135 PF02049 Flagellar hook-basal body complex protein FliE EP12_RS05140 PF08345 Flagellar M-ring protein C-terminal EP12_RS05140 PF01514 Secretory protein of YscJ/FliF family EP12_RS05145 PF14841 FliG middle domain EP12_RS05145 PF01706 FliG C-terminal domain EP12_RS05145 PF14842 FliG N-terminal domain EP12_RS05155 PF18269 T3SS EscN ATPase C-terminal domain EP12_RS05155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_RS05175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EP12_RS05175 PF02154 Flagellar motor switch protein FliM EP12_RS05180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EP12_RS05185 PF04347 Flagellar biosynthesis protein, FliO EP12_RS05190 PF00813 FliP family EP12_RS05195 PF01313 Bacterial export proteins, family 3 EP12_RS05200 PF01311 Bacterial export proteins, family 1 EP12_RS05205 PF01312 FlhB HrpN YscU SpaS Family EP12_RS05210 PF00771 FHIPEP family EP12_RS05215 PF00448 SRP54-type protein, GTPase domain EP12_RS05220 PF10609 NUBPL iron-transfer P-loop NTPase EP12_RS05225 PF04542 Sigma-70 region 2 EP12_RS05225 PF04539 Sigma-70 region 3 EP12_RS05225 PF04545 Sigma-70, region 4 EP12_RS05230 PF00072 Response regulator receiver domain EP12_RS05235 PF04344 Chemotaxis phosphatase, CheZ EP12_RS05240 PF00072 Response regulator receiver domain EP12_RS05240 PF02895 Signal transducing histidine kinase, homodimeric domain EP12_RS05240 PF01627 Hpt domain EP12_RS05240 PF01584 CheW-like domain EP12_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS05245 PF00072 Response regulator receiver domain EP12_RS05245 PF01339 CheB methylesterase EP12_RS05250 PF13614 AAA domain EP12_RS05260 PF01584 CheW-like domain EP12_RS05270 PF04204 Homoserine O-succinyltransferase EP12_RS05285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS05285 PF00672 HAMP domain EP12_RS05285 PF02743 Cache domain EP12_RS05290 PF06865 Pyrimidine/purine nucleoside phosphorylase EP12_RS05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS05295 PF03466 LysR substrate binding domain EP12_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS05300 PF03466 LysR substrate binding domain EP12_RS05305 PF00484 Carbonic anhydrase EP12_RS05315 PF05649 Peptidase family M13 EP12_RS05315 PF01431 Peptidase family M13 EP12_RS05325 PF02631 RecX family EP12_RS05330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EP12_RS05330 PF02272 DHHA1 domain EP12_RS05330 PF01411 tRNA synthetases class II (A) EP12_RS05335 PF02599 Global regulator protein family EP12_RS05360 PF02436 Conserved carboxylase domain EP12_RS05360 PF00682 HMGL-like EP12_RS05360 PF00364 Biotin-requiring enzyme EP12_RS05365 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EP12_RS05375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EP12_RS05375 PF00005 ABC transporter EP12_RS05380 PF12911 N-terminal TM domain of oligopeptide transport permease C EP12_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS05390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EP12_RS05395 PF02954 Bacterial regulatory protein, Fis family EP12_RS05395 PF00158 Sigma-54 interaction domain EP12_RS05400 PF04012 PspA/IM30 family EP12_RS05405 PF06667 Phage shock protein B EP12_RS05415 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EP12_RS05430 PF02798 Glutathione S-transferase, N-terminal domain EP12_RS05430 PF14497 Glutathione S-transferase, C-terminal domain EP12_RS05435 PF01037 Lrp/AsnC ligand binding domain EP12_RS05440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EP12_RS05440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EP12_RS05450 PF00593 TonB dependent receptor EP12_RS05470 PF01618 MotA/TolQ/ExbB proton channel family EP12_RS05475 PF01618 MotA/TolQ/ExbB proton channel family EP12_RS05485 PF03544 Gram-negative bacterial TonB protein C-terminal EP12_RS05495 PF13006 Insertion element 4 transposase N-terminal EP12_RS05495 PF01609 Transposase DDE domain EP12_RS05500 PF05127 Helicase EP12_RS05500 PF13718 GNAT acetyltransferase 2 EP12_RS05525 PF01636 Phosphotransferase enzyme family EP12_RS05540 PF00583 Acetyltransferase (GNAT) family EP12_RS05565 PF00248 Aldo/keto reductase family EP12_RS05595 PF00326 Prolyl oligopeptidase family EP12_RS05595 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EP12_RS05605 PF01156 Inosine-uridine preferring nucleoside hydrolase EP12_RS05610 PF01979 Amidohydrolase family EP12_RS05615 PF00291 Pyridoxal-phosphate dependent enzyme EP12_RS05630 PF00487 Fatty acid desaturase EP12_RS05635 PF00970 Oxidoreductase FAD-binding domain EP12_RS05635 PF00175 Oxidoreductase NAD-binding domain EP12_RS05635 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS05645 PF02371 Transposase IS116/IS110/IS902 family EP12_RS05645 PF01548 Transposase EP12_RS05695 PF03462 PCRF domain EP12_RS05695 PF00472 RF-1 domain EP12_RS05700 PF03462 PCRF domain EP12_RS05700 PF00472 RF-1 domain EP12_RS05715 PF00849 RNA pseudouridylate synthase EP12_RS05730 PF04262 Glutamate-cysteine ligase EP12_RS05745 PF00005 ABC transporter EP12_RS05760 PF00158 Sigma-54 interaction domain EP12_RS05760 PF00072 Response regulator receiver domain EP12_RS05760 PF02954 Bacterial regulatory protein, Fis family EP12_RS05775 PF01713 Smr domain EP12_RS05780 PF05175 Methyltransferase small domain EP12_RS05800 PF04293 SpoVR like protein EP12_RS05815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EP12_RS05815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EP12_RS05820 PF00462 Glutaredoxin EP12_RS05845 PF04324 BFD-like [2Fe-2S] binding domain EP12_RS05850 PF00929 Exonuclease EP12_RS05860 PF03009 Glycerophosphoryl diester phosphodiesterase family EP12_RS05865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_RS05870 PF00313 'Cold-shock' DNA-binding domain EP12_RS05880 PF17151 Periplasmic sensor domain EP12_RS05880 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS05885 PF00486 Transcriptional regulatory protein, C terminal EP12_RS05885 PF18500 CadC C-terminal domain 1 EP12_RS05965 PF00106 short chain dehydrogenase EP12_RS05970 PF10576 Iron-sulfur binding domain of endonuclease III EP12_RS05970 PF00633 Helix-hairpin-helix motif EP12_RS05970 PF00730 HhH-GPD superfamily base excision DNA repair protein EP12_RS05975 PF02508 Rnf-Nqr subunit, membrane protein EP12_RS05980 PF04205 FMN-binding domain EP12_RS05985 PF03116 NQR2, RnfD, RnfE family EP12_RS05995 PF04060 Putative Fe-S cluster EP12_RS06000 PF02508 Rnf-Nqr subunit, membrane protein EP12_RS06015 PF01554 MatE EP12_RS06020 PF17757 UvrB interaction domain EP12_RS06020 PF12344 Ultra-violet resistance protein B EP12_RS06020 PF00271 Helicase conserved C-terminal domain EP12_RS06020 PF02151 UvrB/uvrC motif EP12_RS06020 PF04851 Type III restriction enzyme, res subunit EP12_RS06040 PF06508 Queuosine biosynthesis protein QueC EP12_RS06045 PF04055 Radical SAM superfamily EP12_RS06055 PF13537 Glutamine amidotransferase domain EP12_RS06055 PF00733 Asparagine synthase EP12_RS06080 PF02080 TrkA-C domain EP12_RS06080 PF03600 Citrate transporter EP12_RS06090 PF00459 Inositol monophosphatase family EP12_RS06100 PF01507 Phosphoadenosine phosphosulfate reductase family EP12_RS06105 PF00474 Sodium:solute symporter family EP12_RS06120 PF04542 Sigma-70 region 2 EP12_RS06120 PF08281 Sigma-70, region 4 EP12_RS06135 PF00092 von Willebrand factor type A domain EP12_RS06135 PF07584 Aerotolerance regulator N-terminal EP12_RS06140 PF00092 von Willebrand factor type A domain EP12_RS06150 PF01882 Protein of unknown function DUF58 EP12_RS06155 PF07726 ATPase family associated with various cellular activities (AAA) EP12_RS06155 PF17863 AAA lid domain EP12_RS06160 PF00108 Thiolase, N-terminal domain EP12_RS06160 PF02803 Thiolase, C-terminal domain EP12_RS06165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_RS06165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_RS06165 PF00378 Enoyl-CoA hydratase/isomerase EP12_RS06180 PF05193 Peptidase M16 inactive domain EP12_RS06180 PF00675 Insulinase (Peptidase family M16) EP12_RS06185 PF00300 Histidine phosphatase superfamily (branch 1) EP12_RS06195 PF03471 Transporter associated domain EP12_RS06195 PF00571 CBS domain EP12_RS06195 PF01595 Cyclin M transmembrane N-terminal domain EP12_RS06200 PF01578 Cytochrome C assembly protein EP12_RS06210 PF00448 SRP54-type protein, GTPase domain EP12_RS06210 PF02881 SRP54-type protein, helical bundle domain EP12_RS06210 PF02978 Signal peptide binding domain EP12_RS06245 PF00873 AcrB/AcrD/AcrF family EP12_RS06250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS06255 PF00005 ABC transporter EP12_RS06255 PF00664 ABC transporter transmembrane region EP12_RS06260 PF01053 Cys/Met metabolism PLP-dependent enzyme EP12_RS06275 PF00886 Ribosomal protein S16 EP12_RS06280 PF01782 RimM N-terminal domain EP12_RS06280 PF05239 PRC-barrel domain EP12_RS06285 PF01746 tRNA (Guanine-1)-methyltransferase EP12_RS06290 PF01245 Ribosomal protein L19 EP12_RS06295 PF03458 UPF0126 domain EP12_RS06300 PF00378 Enoyl-CoA hydratase/isomerase EP12_RS06305 PF00793 DAHP synthetase I family EP12_RS06310 PF01817 Chorismate mutase type II EP12_RS06310 PF02153 Prephenate dehydrogenase EP12_RS06315 PF01817 Chorismate mutase type II EP12_RS06315 PF00800 Prephenate dehydratase EP12_RS06325 PF00072 Response regulator receiver domain EP12_RS06330 PF01253 Translation initiation factor SUI1 EP12_RS06360 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS06370 PF00158 Sigma-54 interaction domain EP12_RS06370 PF00072 Response regulator receiver domain EP12_RS06375 PF01904 Protein of unknown function DUF72 EP12_RS06380 PF02938 GAD domain EP12_RS06380 PF00152 tRNA synthetases class II (D, K and N) EP12_RS06380 PF01336 OB-fold nucleic acid binding domain EP12_RS06385 PF00293 NUDIX domain EP12_RS06390 PF02075 Crossover junction endodeoxyribonuclease RuvC EP12_RS06395 PF07499 RuvA, C-terminal domain EP12_RS06395 PF01330 RuvA N terminal domain EP12_RS06400 PF05491 RuvB C-terminal winged helix domain EP12_RS06400 PF05496 Holliday junction DNA helicase RuvB P-loop domain EP12_RS06400 PF17864 RuvB AAA lid domain EP12_RS06405 PF03061 Thioesterase superfamily EP12_RS06410 PF01618 MotA/TolQ/ExbB proton channel family EP12_RS06415 PF02472 Biopolymer transport protein ExbD/TolR EP12_RS06430 PF00691 OmpA family EP12_RS06435 PF13174 Tetratricopeptide repeat EP12_RS06435 PF16331 TolA binding protein trimerisation EP12_RS06455 PF02445 Quinolinate synthetase A protein EP12_RS06555 PF07030 Protein of unknown function (DUF1320) EP12_RS06565 PF10124 Mu-like prophage major head subunit gpT EP12_RS06570 PF10123 Mu-like prophage I protein EP12_RS06600 PF06074 Protein of unknown function (DUF935) EP12_RS06605 PF03237 Terminase-like family EP12_RS06610 PF11985 Protein of unknown function (DUF3486) EP12_RS06725 PF13693 Winged helix-turn-helix DNA-binding EP12_RS06770 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS06780 PF00675 Insulinase (Peptidase family M16) EP12_RS06780 PF05193 Peptidase M16 inactive domain EP12_RS06785 PF09308 LuxQ, periplasmic EP12_RS06785 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS06785 PF00072 Response regulator receiver domain EP12_RS06795 PF01118 Semialdehyde dehydrogenase, NAD binding domain EP12_RS06795 PF02774 Semialdehyde dehydrogenase, dimerisation domain EP12_RS06800 PF00296 Luciferase-like monooxygenase EP12_RS06805 PF00106 short chain dehydrogenase EP12_RS06810 PF06628 Catalase-related immune-responsive EP12_RS06810 PF00199 Catalase EP12_RS06810 PF18011 C-terminal domain found in long catalases EP12_RS06815 PF01292 Prokaryotic cytochrome b561 EP12_RS06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS06820 PF03466 LysR substrate binding domain EP12_RS06825 PF00698 Acyl transferase domain EP12_RS06825 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS06825 PF08659 KR domain EP12_RS06825 PF00550 Phosphopantetheine attachment site EP12_RS06825 PF14765 Polyketide synthase dehydratase EP12_RS06850 PF00873 AcrB/AcrD/AcrF family EP12_RS06855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS06860 PF03707 Bacterial signalling protein N terminal repeat EP12_RS06860 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS06860 PF00563 EAL domain EP12_RS06870 PF02470 MlaD protein EP12_RS06875 PF04403 Paraquat-inducible protein A EP12_RS06900 PF01381 Helix-turn-helix EP12_RS06915 PF00144 Beta-lactamase EP12_RS06920 PF01336 OB-fold nucleic acid binding domain EP12_RS06920 PF00152 tRNA synthetases class II (D, K and N) EP12_RS06930 PF01699 Sodium/calcium exchanger protein EP12_RS06935 PF18030 RimK PreATP-grasp domain EP12_RS06935 PF08443 RimK-like ATP-grasp domain EP12_RS06955 PF00202 Aminotransferase class-III EP12_RS06960 PF06968 Biotin and Thiamin Synthesis associated domain EP12_RS06960 PF04055 Radical SAM superfamily EP12_RS06965 PF00155 Aminotransferase class I and II EP12_RS06980 PF03575 Peptidase family S51 EP12_RS06985 PF01451 Low molecular weight phosphotyrosine protein phosphatase EP12_RS06990 PF01474 Class-II DAHP synthetase family EP12_RS07000 PF13732 Domain of unknown function (DUF4162) EP12_RS07000 PF00005 ABC transporter EP12_RS07005 PF06580 Histidine kinase EP12_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS07010 PF00072 Response regulator receiver domain EP12_RS07010 PF04397 LytTr DNA-binding domain EP12_RS07020 PF00005 ABC transporter EP12_RS07020 PF00664 ABC transporter transmembrane region EP12_RS07025 PF04055 Radical SAM superfamily EP12_RS07025 PF06463 Molybdenum Cofactor Synthesis C EP12_RS07085 PF01207 Dihydrouridine synthase (Dus) EP12_RS07090 PF01979 Amidohydrolase family EP12_RS07110 PF13472 GDSL-like Lipase/Acylhydrolase family EP12_RS07115 PF00005 ABC transporter EP12_RS07125 PF01370 NAD dependent epimerase/dehydratase family EP12_RS07125 PF08338 Domain of unknown function (DUF1731) EP12_RS07130 PF02152 Dihydroneopterin aldolase EP12_RS07135 PF01594 AI-2E family transporter EP12_RS07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS07145 PF00072 Response regulator receiver domain EP12_RS07145 PF00486 Transcriptional regulatory protein, C terminal EP12_RS07160 PF03795 YCII-related domain EP12_RS07165 PF00290 Tryptophan synthase alpha chain EP12_RS07175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EP12_RS07175 PF00218 Indole-3-glycerol phosphate synthase EP12_RS07185 PF00117 Glutamine amidotransferase class-I EP12_RS07190 PF00425 chorismate binding enzyme EP12_RS07190 PF04715 Anthranilate synthase component I, N terminal region EP12_RS07195 PF02811 PHP domain EP12_RS07200 PF01300 Telomere recombination EP12_RS07205 PF02616 Segregation and condensation protein ScpA EP12_RS07210 PF04079 Segregation and condensation complex subunit ScpB EP12_RS07215 PF00849 RNA pseudouridylate synthase EP12_RS07215 PF01479 S4 domain EP12_RS07220 PF00248 Aldo/keto reductase family EP12_RS07225 PF14602 Hexapeptide repeat of succinyl-transferase EP12_RS07225 PF12464 Maltose acetyltransferase EP12_RS07235 PF03960 ArsC family EP12_RS07240 PF04286 Protein of unknown function (DUF445) EP12_RS07245 PF05724 Thiopurine S-methyltransferase (TPMT) EP12_RS07250 PF04355 SmpA / OmlA family EP12_RS07265 PF00210 Ferritin-like domain EP12_RS07270 PF01513 ATP-NAD kinase EP12_RS07285 PF00561 alpha/beta hydrolase fold EP12_RS07295 PF07715 TonB-dependent Receptor Plug Domain EP12_RS07295 PF00593 TonB dependent receptor EP12_RS07300 PF00072 Response regulator receiver domain EP12_RS07300 PF00196 Bacterial regulatory proteins, luxR family EP12_RS07315 PF01025 GrpE EP12_RS07320 PF00012 Hsp70 protein EP12_RS07325 PF00226 DnaJ domain EP12_RS07325 PF00684 DnaJ central domain EP12_RS07325 PF01556 DnaJ C terminal domain EP12_RS07330 PF01322 Cytochrome C' EP12_RS07335 PF03707 Bacterial signalling protein N terminal repeat EP12_RS07335 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS07335 PF00563 EAL domain EP12_RS07345 PF05173 Dihydrodipicolinate reductase, C-terminus EP12_RS07345 PF01113 Dihydrodipicolinate reductase, N-terminus EP12_RS07350 PF00117 Glutamine amidotransferase class-I EP12_RS07350 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EP12_RS07355 PF02142 MGS-like domain EP12_RS07355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_RS07355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EP12_RS07360 PF01272 Transcription elongation factor, GreA/GreB, C-term EP12_RS07360 PF03449 Transcription elongation factor, N-terminal EP12_RS07365 PF12729 Four helix bundle sensory module for signal transduction EP12_RS07365 PF00672 HAMP domain EP12_RS07365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS07375 PF00011 Hsp20/alpha crystallin family EP12_RS07380 PF00871 Acetokinase family EP12_RS07390 PF00795 Carbon-nitrogen hydrolase EP12_RS07395 PF03471 Transporter associated domain EP12_RS07395 PF00571 CBS domain EP12_RS07400 PF02397 Bacterial sugar transferase EP12_RS07405 PF01370 NAD dependent epimerase/dehydratase family EP12_RS07415 PF02130 Uncharacterized protein family UPF0054 EP12_RS07420 PF02562 PhoH-like protein EP12_RS07425 PF01938 TRAM domain EP12_RS07425 PF04055 Radical SAM superfamily EP12_RS07425 PF00919 Uncharacterized protein family UPF0004 EP12_RS07430 PF01494 FAD binding domain EP12_RS07450 PF03061 Thioesterase superfamily EP12_RS07455 PF01613 Flavin reductase like domain EP12_RS07460 PF01235 Sodium:alanine symporter family EP12_RS07500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EP12_RS07525 PF14693 Ribosomal protein TL5, C-terminal domain EP12_RS07525 PF01386 Ribosomal L25p family EP12_RS07550 PF08544 GHMP kinases C terminal EP12_RS07550 PF00288 GHMP kinases N terminal domain EP12_RS07555 PF03550 Outer membrane lipoprotein LolB EP12_RS07565 PF00472 RF-1 domain EP12_RS07565 PF03462 PCRF domain EP12_RS07570 PF13847 Methyltransferase domain EP12_RS07570 PF17827 PrmC N-terminal domain EP12_RS07575 PF11849 Domain of unknown function (DUF3369) EP12_RS07580 PF04247 Invasion gene expression up-regulator, SirB EP12_RS07585 PF00793 DAHP synthetase I family EP12_RS07595 PF03466 LysR substrate binding domain EP12_RS07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS07605 PF04241 Protein of unknown function (DUF423) EP12_RS07610 PF01728 FtsJ-like methyltransferase EP12_RS07610 PF18125 RlmM ferredoxin-like domain EP12_RS07615 PF00679 Elongation factor G C-terminus EP12_RS07615 PF14492 Elongation Factor G, domain II EP12_RS07615 PF03764 Elongation factor G, domain IV EP12_RS07615 PF00009 Elongation factor Tu GTP binding domain EP12_RS07615 PF03144 Elongation factor Tu domain 2 EP12_RS07625 PF02560 Cyanate lyase C-terminal domain EP12_RS07630 PF03793 PASTA domain EP12_RS07630 PF00069 Protein kinase domain EP12_RS07640 PF17206 SeqA protein N-terminal domain EP12_RS07640 PF03925 SeqA protein C-terminal domain EP12_RS07645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EP12_RS07645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EP12_RS07645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EP12_RS07645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EP12_RS07650 PF00343 Carbohydrate phosphorylase EP12_RS07655 PF03707 Bacterial signalling protein N terminal repeat EP12_RS07655 PF00563 EAL domain EP12_RS07655 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS07660 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_RS07670 PF01906 Putative heavy-metal-binding EP12_RS07685 PF07687 Peptidase dimerisation domain EP12_RS07685 PF01546 Peptidase family M20/M25/M40 EP12_RS07690 PF03960 ArsC family EP12_RS07710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_RS07715 PF04209 homogentisate 1,2-dioxygenase EP12_RS07750 PF00574 Clp protease EP12_RS07795 PF12327 FtsZ family, C-terminal domain EP12_RS07795 PF00091 Tubulin/FtsZ family, GTPase domain EP12_RS07805 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS07805 PF05231 MASE1 EP12_RS07805 PF00563 EAL domain EP12_RS07805 PF13426 PAS domain EP12_RS07805 PF08447 PAS fold EP12_RS07805 PF08448 PAS fold EP12_RS07820 PF00576 HIUase/Transthyretin family EP12_RS07835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EP12_RS07835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EP12_RS07840 PF01799 [2Fe-2S] binding domain EP12_RS07840 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS07845 PF08362 YcdC-like protein, C-terminal region EP12_RS07845 PF00440 Bacterial regulatory proteins, tetR family EP12_RS07860 PF00860 Permease family EP12_RS07865 PF00962 Adenosine/AMP deaminase EP12_RS07875 PF03707 Bacterial signalling protein N terminal repeat EP12_RS07875 PF00563 EAL domain EP12_RS07875 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS07885 PF00072 Response regulator receiver domain EP12_RS07885 PF09308 LuxQ, periplasmic EP12_RS07885 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS07910 PF00593 TonB dependent receptor EP12_RS07910 PF07715 TonB-dependent Receptor Plug Domain EP12_RS07915 PF00860 Permease family EP12_RS07930 PF01546 Peptidase family M20/M25/M40 EP12_RS07930 PF07687 Peptidase dimerisation domain EP12_RS07935 PF00266 Aminotransferase class-V EP12_RS07940 PF01925 Sulfite exporter TauE/SafE EP12_RS07950 PF01425 Amidase EP12_RS07985 PF03881 Fructosamine kinase EP12_RS07990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EP12_RS07990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EP12_RS07990 PF02824 TGS domain EP12_RS07990 PF03129 Anticodon binding domain EP12_RS07995 PF05198 Translation initiation factor IF-3, N-terminal domain EP12_RS07995 PF00707 Translation initiation factor IF-3, C-terminal domain EP12_RS08000 PF01632 Ribosomal protein L35 EP12_RS08005 PF00453 Ribosomal protein L20 EP12_RS08010 PF01050 Mannose-6-phosphate isomerase EP12_RS08010 PF00483 Nucleotidyl transferase EP12_RS08015 PF02397 Bacterial sugar transferase EP12_RS08025 PF10531 SLBB domain EP12_RS08025 PF02563 Polysaccharide biosynthesis/export protein EP12_RS08025 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EP12_RS08070 PF00534 Glycosyl transferases group 1 EP12_RS08070 PF13439 Glycosyltransferase Family 4 EP12_RS08090 PF01757 Acyltransferase family EP12_RS08100 PF00534 Glycosyl transferases group 1 EP12_RS08100 PF13439 Glycosyltransferase Family 4 EP12_RS08135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EP12_RS08135 PF01409 tRNA synthetases class II core domain (F) EP12_RS08140 PF03484 tRNA synthetase B5 domain EP12_RS08140 PF03147 Ferredoxin-fold anticodon binding domain EP12_RS08140 PF03483 B3/4 domain EP12_RS08140 PF01588 Putative tRNA binding domain EP12_RS08140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EP12_RS08145 PF00216 Bacterial DNA-binding protein EP12_RS08155 PF04073 Aminoacyl-tRNA editing domain EP12_RS08165 PF00933 Glycosyl hydrolase family 3 N terminal domain EP12_RS08170 PF01923 Cobalamin adenosyltransferase EP12_RS08180 PF17757 UvrB interaction domain EP12_RS08180 PF00271 Helicase conserved C-terminal domain EP12_RS08180 PF00270 DEAD/DEAH box helicase EP12_RS08180 PF03461 TRCF domain EP12_RS08180 PF02559 CarD-like/TRCF domain EP12_RS08190 PF12704 MacB-like periplasmic core domain EP12_RS08190 PF02687 FtsX-like permease family EP12_RS08195 PF00156 Phosphoribosyl transferase domain EP12_RS08205 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_RS08240 PF07690 Major Facilitator Superfamily EP12_RS08250 PF00483 Nucleotidyl transferase EP12_RS08265 PF00682 HMGL-like EP12_RS08270 PF00289 Biotin carboxylase, N-terminal domain EP12_RS08270 PF02785 Biotin carboxylase C-terminal domain EP12_RS08270 PF18140 Propionyl-coenzyme A carboxylase BT domain EP12_RS08270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_RS08270 PF00364 Biotin-requiring enzyme EP12_RS08280 PF01039 Carboxyl transferase domain EP12_RS08290 PF13411 MerR HTH family regulatory protein EP12_RS08295 PF02803 Thiolase, C-terminal domain EP12_RS08295 PF00108 Thiolase, N-terminal domain EP12_RS08310 PF08411 Exonuclease C-terminal EP12_RS08310 PF00929 Exonuclease EP12_RS08325 PF00149 Calcineurin-like phosphoesterase EP12_RS08325 PF16656 Purple acid Phosphatase, N-terminal domain EP12_RS08365 PF10672 S-adenosylmethionine-dependent methyltransferase EP12_RS08365 PF17785 PUA-like domain EP12_RS08370 PF00698 Acyl transferase domain EP12_RS08370 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS08370 PF02801 Beta-ketoacyl synthase, C-terminal domain EP12_RS08370 PF08659 KR domain EP12_RS08370 PF14765 Polyketide synthase dehydratase EP12_RS08370 PF00550 Phosphopantetheine attachment site EP12_RS08370 PF00109 Beta-ketoacyl synthase, N-terminal domain EP12_RS08370 PF16197 Ketoacyl-synthetase C-terminal extension EP12_RS08375 PF00075 RNase H EP12_RS08380 PF00929 Exonuclease EP12_RS08415 PF00005 ABC transporter EP12_RS08420 PF12704 MacB-like periplasmic core domain EP12_RS08420 PF02687 FtsX-like permease family EP12_RS08435 PF04996 Succinylarginine dihydrolase EP12_RS08440 PF01131 DNA topoisomerase EP12_RS08440 PF01751 Toprim domain EP12_RS08440 PF01396 Topoisomerase DNA binding C4 zinc finger EP12_RS08440 PF08272 Topoisomerase I zinc-ribbon-like EP12_RS08445 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EP12_RS08450 PF00962 Adenosine/AMP deaminase EP12_RS08455 PF13673 Acetyltransferase (GNAT) domain EP12_RS08460 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS08475 PF01479 S4 domain EP12_RS08475 PF00849 RNA pseudouridylate synthase EP12_RS08480 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS08485 PF02545 Maf-like protein EP12_RS08490 PF02620 Large ribosomal RNA subunit accumulation protein YceD EP12_RS08495 PF01783 Ribosomal L32p protein family EP12_RS08510 PF00698 Acyl transferase domain EP12_RS08520 PF00550 Phosphopantetheine attachment site EP12_RS08525 PF00109 Beta-ketoacyl synthase, N-terminal domain EP12_RS08525 PF02801 Beta-ketoacyl synthase, C-terminal domain EP12_RS08535 PF00561 alpha/beta hydrolase fold EP12_RS08550 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_RS08550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_RS08550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_RS08550 PF12806 Acetyl-CoA dehydrogenase C-terminal like EP12_RS08560 PF04198 Putative sugar-binding domain EP12_RS08565 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS08575 PF01232 Mannitol dehydrogenase Rossmann domain EP12_RS08575 PF08125 Mannitol dehydrogenase C-terminal domain EP12_RS08585 PF03466 LysR substrate binding domain EP12_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS08590 PF01575 MaoC like domain EP12_RS08595 PF00924 Mechanosensitive ion channel EP12_RS08600 PF07715 TonB-dependent Receptor Plug Domain EP12_RS08600 PF00593 TonB dependent receptor EP12_RS08605 PF01329 Pterin 4 alpha carbinolamine dehydratase EP12_RS08620 PF00672 HAMP domain EP12_RS08620 PF17149 Periplasmic sensor domain found in signal transduction proteins EP12_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS08620 PF01627 Hpt domain EP12_RS08620 PF00072 Response regulator receiver domain EP12_RS08620 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS08625 PF00072 Response regulator receiver domain EP12_RS08630 PF17384 RimP C-terminal SH3 domain EP12_RS08630 PF02576 RimP N-terminal domain EP12_RS08635 PF13184 NusA-like KH domain EP12_RS08635 PF08529 NusA N-terminal domain EP12_RS08635 PF00575 S1 RNA binding domain EP12_RS08640 PF00009 Elongation factor Tu GTP binding domain EP12_RS08640 PF11987 Translation-initiation factor 2 EP12_RS08640 PF08364 Bacterial translation initiation factor IF-2 associated region EP12_RS08640 PF04760 Translation initiation factor IF-2, N-terminal region EP12_RS08645 PF02033 Ribosome-binding factor A EP12_RS08650 PF09157 Pseudouridine synthase II TruB, C-terminal EP12_RS08650 PF16198 tRNA pseudouridylate synthase B C-terminal domain EP12_RS08650 PF01509 TruB family pseudouridylate synthase (N terminal domain) EP12_RS08655 PF00312 Ribosomal protein S15 EP12_RS08660 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS08660 PF08448 PAS fold EP12_RS08665 PF12697 Alpha/beta hydrolase family EP12_RS08675 PF00795 Carbon-nitrogen hydrolase EP12_RS08675 PF00583 Acetyltransferase (GNAT) family EP12_RS08705 PF10417 C-terminal domain of 1-Cys peroxiredoxin EP12_RS08705 PF00578 AhpC/TSA family EP12_RS08710 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS08710 PF13192 Thioredoxin domain EP12_RS08715 PF07715 TonB-dependent Receptor Plug Domain EP12_RS08715 PF00593 TonB dependent receptor EP12_RS08745 PF11842 Domain of unknown function (DUF3362) EP12_RS08745 PF04055 Radical SAM superfamily EP12_RS08745 PF08497 Radical SAM N-terminal EP12_RS08760 PF00593 TonB dependent receptor EP12_RS08760 PF07715 TonB-dependent Receptor Plug Domain EP12_RS08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS08765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_RS08775 PF13416 Bacterial extracellular solute-binding protein EP12_RS08780 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS08785 PF00005 ABC transporter EP12_RS08790 PF01066 CDP-alcohol phosphatidyltransferase EP12_RS08800 PF06055 Exopolysaccharide synthesis, ExoD EP12_RS08805 PF00107 Zinc-binding dehydrogenase EP12_RS08805 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS08815 PF00593 TonB dependent receptor EP12_RS08815 PF07715 TonB-dependent Receptor Plug Domain EP12_RS08840 PF12729 Four helix bundle sensory module for signal transduction EP12_RS08840 PF00672 HAMP domain EP12_RS08840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS08845 PF07715 TonB-dependent Receptor Plug Domain EP12_RS08845 PF00593 TonB dependent receptor EP12_RS08860 PF00005 ABC transporter EP12_RS08875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EP12_RS08880 PF01668 SmpB protein EP12_RS08885 PF03364 Polyketide cyclase / dehydrase and lipid transport EP12_RS08890 PF03658 RnfH family Ubiquitin EP12_RS08900 PF02028 BCCT, betaine/carnitine/choline family transporter EP12_RS08905 PF07715 TonB-dependent Receptor Plug Domain EP12_RS08905 PF00593 TonB dependent receptor EP12_RS08910 PF13181 Tetratricopeptide repeat EP12_RS08915 PF03618 Kinase/pyrophosphorylase EP12_RS08925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EP12_RS08930 PF01799 [2Fe-2S] binding domain EP12_RS08930 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS08940 PF02913 FAD linked oxidases, C-terminal domain EP12_RS08940 PF01565 FAD binding domain EP12_RS08940 PF13183 4Fe-4S dicluster domain EP12_RS08950 PF08007 Cupin superfamily protein EP12_RS08960 PF08328 Adenylosuccinate lyase C-terminal EP12_RS08960 PF00206 Lyase EP12_RS08965 PF04356 Protein of unknown function (DUF489) EP12_RS08975 PF00849 RNA pseudouridylate synthase EP12_RS08980 PF03971 Monomeric isocitrate dehydrogenase EP12_RS08985 PF00313 'Cold-shock' DNA-binding domain EP12_RS08990 PF02617 ATP-dependent Clp protease adaptor protein ClpS EP12_RS08995 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_RS08995 PF17871 AAA lid domain EP12_RS08995 PF02861 Clp amino terminal domain, pathogenicity island component EP12_RS08995 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS08995 PF07724 AAA domain (Cdc48 subfamily) EP12_RS09000 PF01176 Translation initiation factor 1A / IF-1 EP12_RS09005 PF04376 Arginine-tRNA-protein transferase, N terminus EP12_RS09005 PF04377 Arginine-tRNA-protein transferase, C terminus EP12_RS09010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EP12_RS09015 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS09020 PF04217 Protein of unknown function, DUF412 EP12_RS09025 PF10263 SprT-like family EP12_RS09030 PF01343 Peptidase family S49 EP12_RS09040 PF00881 Nitroreductase family EP12_RS09050 PF17763 Glutaminase/Asparaginase C-terminal domain EP12_RS09050 PF00710 Asparaginase, N-terminal EP12_RS09055 PF17158 Membrane-associated sensor, integral membrane domain EP12_RS09055 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS09060 PF04055 Radical SAM superfamily EP12_RS09060 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EP12_RS09065 PF03099 Biotin/lipoate A/B protein ligase family EP12_RS09070 PF04359 Protein of unknown function (DUF493) EP12_RS09075 PF07943 Penicillin-binding protein 5, C-terminal domain EP12_RS09075 PF00768 D-alanyl-D-alanine carboxypeptidase EP12_RS09080 PF03330 Lytic transglycolase EP12_RS09080 PF05036 Sporulation related domain EP12_RS09085 PF01098 Cell cycle protein EP12_RS09090 PF00905 Penicillin binding protein transpeptidase domain EP12_RS09090 PF03717 Penicillin-binding Protein dimerisation domain EP12_RS09095 PF02590 Predicted SPOUT methyltransferase EP12_RS09105 PF01467 Cytidylyltransferase-like EP12_RS09110 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EP12_RS09110 PF06144 DNA polymerase III, delta subunit EP12_RS09115 PF04390 Lipopolysaccharide-assembly EP12_RS09120 PF08264 Anticodon-binding domain of tRNA EP12_RS09120 PF00133 tRNA synthetases class I (I, L, M and V) EP12_RS09120 PF13603 Leucyl-tRNA synthetase, Domain 2 EP12_RS09125 PF05362 Lon protease (S16) C-terminal proteolytic domain EP12_RS09125 PF13654 AAA domain EP12_RS09130 PF00106 short chain dehydrogenase EP12_RS09135 PF01985 CRS1 / YhbY (CRM) domain EP12_RS09140 PF01728 FtsJ-like methyltransferase EP12_RS09145 PF17862 AAA+ lid domain EP12_RS09145 PF06480 FtsH Extracellular EP12_RS09145 PF01434 Peptidase family M41 EP12_RS09145 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS09150 PF00809 Pterin binding enzyme EP12_RS09155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EP12_RS09155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EP12_RS09155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EP12_RS09155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EP12_RS09160 PF00121 Triosephosphate isomerase EP12_RS09165 PF03840 Preprotein translocase SecG subunit EP12_RS09190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EP12_RS09190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EP12_RS09195 PF00781 Diacylglycerol kinase catalytic domain EP12_RS09205 PF00106 short chain dehydrogenase EP12_RS09220 PF00474 Sodium:solute symporter family EP12_RS09225 PF00696 Amino acid kinase family EP12_RS09230 PF00171 Aldehyde dehydrogenase family EP12_RS09245 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EP12_RS09245 PF00575 S1 RNA binding domain EP12_RS09245 PF03725 3' exoribonuclease family, domain 2 EP12_RS09245 PF01138 3' exoribonuclease family, domain 1 EP12_RS09245 PF00013 KH domain EP12_RS09265 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region EP12_RS09265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EP12_RS09270 PF13181 Tetratricopeptide repeat EP12_RS09270 PF07719 Tetratricopeptide repeat EP12_RS09285 PF02463 RecF/RecN/SMC N terminal domain EP12_RS09285 PF06470 SMC proteins Flexible Hinge Domain EP12_RS09290 PF04354 ZipA, C-terminal FtsZ-binding domain EP12_RS09295 PF12826 Helix-hairpin-helix motif EP12_RS09295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EP12_RS09295 PF00533 BRCA1 C Terminus (BRCT) domain EP12_RS09295 PF01653 NAD-dependent DNA ligase adenylation domain EP12_RS09295 PF03120 NAD-dependent DNA ligase OB-fold domain EP12_RS09305 PF03772 Competence protein EP12_RS09305 PF00753 Metallo-beta-lactamase superfamily EP12_RS09310 PF00664 ABC transporter transmembrane region EP12_RS09310 PF00005 ABC transporter EP12_RS09315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EP12_RS09320 PF03966 Trm112p-like protein EP12_RS09325 PF02348 Cytidylyltransferase EP12_RS09335 PF04055 Radical SAM superfamily EP12_RS09335 PF00919 Uncharacterized protein family UPF0004 EP12_RS09335 PF18693 TRAM domain EP12_RS09395 PF04299 Putative FMN-binding domain EP12_RS09435 PF00899 ThiF family EP12_RS09445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EP12_RS09445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EP12_RS09445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EP12_RS09445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EP12_RS09455 PF00285 Citrate synthase, C-terminal domain EP12_RS09460 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EP12_RS09465 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EP12_RS09470 PF00890 FAD binding domain EP12_RS09470 PF02910 Fumarate reductase flavoprotein C-term EP12_RS09475 PF13085 2Fe-2S iron-sulfur cluster binding domain EP12_RS09480 PF16870 2-oxoglutarate dehydrogenase C-terminal EP12_RS09480 PF02779 Transketolase, pyrimidine binding domain EP12_RS09480 PF00676 Dehydrogenase E1 component EP12_RS09480 PF16078 2-oxoglutarate dehydrogenase N-terminus EP12_RS09485 PF02817 e3 binding domain EP12_RS09485 PF00364 Biotin-requiring enzyme EP12_RS09485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EP12_RS09490 PF08442 ATP-grasp domain EP12_RS09490 PF00549 CoA-ligase EP12_RS09495 PF02629 CoA binding domain EP12_RS09495 PF00549 CoA-ligase EP12_RS09520 PF11852 Domain of unknown function (DUF3372) EP12_RS09520 PF03714 Bacterial pullanase-associated domain EP12_RS09520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EP12_RS09520 PF17967 Pullulanase N2 domain EP12_RS09520 PF18494 Pullulanase Ins domain EP12_RS09535 PF16657 Maltogenic Amylase, C-terminal domain EP12_RS09535 PF02903 Alpha amylase, N-terminal ig-like domain EP12_RS09535 PF00128 Alpha amylase, catalytic domain EP12_RS09540 PF10438 Cyclo-malto-dextrinase C-terminal domain EP12_RS09540 PF09087 Cyclomaltodextrinase, N-terminal EP12_RS09540 PF00128 Alpha amylase, catalytic domain EP12_RS09550 PF00128 Alpha amylase, catalytic domain EP12_RS09550 PF00686 Starch binding domain EP12_RS09560 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EP12_RS09560 PF00749 tRNA synthetases class I (E and Q), catalytic domain EP12_RS09565 PF00106 short chain dehydrogenase EP12_RS09570 PF12262 Bacterial virulence factor lipase N-terminal EP12_RS09575 PF01804 Penicillin amidase EP12_RS09580 PF01343 Peptidase family S49 EP12_RS09580 PF08496 Peptidase family S49 N-terminal EP12_RS09595 PF13847 Methyltransferase domain EP12_RS09600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_RS09600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP12_RS09605 PF00255 Glutathione peroxidase EP12_RS09610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_RS09610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EP12_RS09620 PF00171 Aldehyde dehydrogenase family EP12_RS09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_RS09625 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_RS09625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_RS09630 PF00378 Enoyl-CoA hydratase/isomerase EP12_RS09635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EP12_RS09635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_RS09640 PF13847 Methyltransferase domain EP12_RS09650 PF11893 Domain of unknown function (DUF3413) EP12_RS09650 PF00884 Sulfatase EP12_RS09655 PF07208 Protein of unknown function (DUF1414) EP12_RS09660 PF04245 37-kD nucleoid-associated bacterial protein EP12_RS09690 PF07694 5TMR of 5TMR-LYT EP12_RS09690 PF06580 Histidine kinase EP12_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS09695 PF04397 LytTr DNA-binding domain EP12_RS09695 PF00072 Response regulator receiver domain EP12_RS09700 PF00365 Phosphofructokinase EP12_RS09715 PF02384 N-6 DNA Methylase EP12_RS09715 PF12161 HsdM N-terminal domain EP12_RS09730 PF18766 SWI2/SNF2 ATPase EP12_RS09730 PF11867 Domain of unknown function (DUF3387) EP12_RS09730 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EP12_RS09755 PF00753 Metallo-beta-lactamase superfamily EP12_RS09755 PF16123 Hydroxyacylglutathione hydrolase C-terminus EP12_RS09760 PF01794 Ferric reductase like transmembrane component EP12_RS09780 PF00005 ABC transporter EP12_RS09815 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS09815 PF01627 Hpt domain EP12_RS09815 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_RS09815 PF00072 Response regulator receiver domain EP12_RS09815 PF00989 PAS fold EP12_RS09835 PF01479 S4 domain EP12_RS09835 PF00849 RNA pseudouridylate synthase EP12_RS09840 PF03707 Bacterial signalling protein N terminal repeat EP12_RS09840 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS09840 PF00563 EAL domain EP12_RS09845 PF00271 Helicase conserved C-terminal domain EP12_RS09845 PF00270 DEAD/DEAH box helicase EP12_RS09850 PF01144 Coenzyme A transferase EP12_RS09855 PF01144 Coenzyme A transferase EP12_RS09885 PF03466 LysR substrate binding domain EP12_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS09890 PF03313 Serine dehydratase alpha chain EP12_RS09890 PF03315 Serine dehydratase beta chain EP12_RS09895 PF00293 NUDIX domain EP12_RS09900 PF04715 Anthranilate synthase component I, N terminal region EP12_RS09900 PF00425 chorismate binding enzyme EP12_RS09910 PF02646 RmuC family EP12_RS09915 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS09915 PF08448 PAS fold EP12_RS09930 PF00082 Subtilase family EP12_RS09930 PF13860 FlgD Ig-like domain EP12_RS09930 PF02225 PA domain EP12_RS09930 PF05922 Peptidase inhibitor I9 EP12_RS09935 PF00676 Dehydrogenase E1 component EP12_RS09940 PF02779 Transketolase, pyrimidine binding domain EP12_RS09940 PF02780 Transketolase, C-terminal domain EP12_RS09945 PF00364 Biotin-requiring enzyme EP12_RS09945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EP12_RS09945 PF02817 e3 binding domain EP12_RS09950 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EP12_RS09955 PF00069 Protein kinase domain EP12_RS09965 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS09970 PF00266 Aminotransferase class-V EP12_RS09980 PF13185 GAF domain EP12_RS09990 PF04352 ProQ/FINO family EP12_RS09990 PF17516 ProQ C-terminal domain EP12_RS09995 PF00595 PDZ domain EP12_RS09995 PF11818 C-terminal domain of tail specific protease (DUF3340) EP12_RS09995 PF17804 Tail specific protease N-terminal domain EP12_RS09995 PF03572 Peptidase family S41 EP12_RS10000 PF00209 Sodium:neurotransmitter symporter family EP12_RS10050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS10055 PF00873 AcrB/AcrD/AcrF family EP12_RS10065 PF00970 Oxidoreductase FAD-binding domain EP12_RS10065 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS10065 PF00175 Oxidoreductase NAD-binding domain EP12_RS10120 PF00970 Oxidoreductase FAD-binding domain EP12_RS10120 PF00042 Globin EP12_RS10120 PF00175 Oxidoreductase NAD-binding domain EP12_RS10145 PF02769 AIR synthase related protein, C-terminal domain EP12_RS10145 PF00586 AIR synthase related protein, N-terminal domain EP12_RS10150 PF00376 MerR family regulatory protein EP12_RS10150 PF09278 MerR, DNA binding EP12_RS10155 PF00403 Heavy-metal-associated domain EP12_RS10195 PF00462 Glutaredoxin EP12_RS10210 PF05275 Copper resistance protein B precursor (CopB) EP12_RS10215 PF07732 Multicopper oxidase EP12_RS10215 PF00394 Multicopper oxidase EP12_RS10215 PF07731 Multicopper oxidase EP12_RS10245 PF13411 MerR HTH family regulatory protein EP12_RS10260 PF00529 HlyD membrane-fusion protein of T1SS EP12_RS10260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS10265 PF00873 AcrB/AcrD/AcrF family EP12_RS10270 PF16916 Dimerisation domain of Zinc Transporter EP12_RS10270 PF01545 Cation efflux family EP12_RS10290 PF00873 AcrB/AcrD/AcrF family EP12_RS10295 PF07660 Secretin and TonB N terminus short domain EP12_RS10295 PF07715 TonB-dependent Receptor Plug Domain EP12_RS10295 PF00593 TonB dependent receptor EP12_RS10325 PF13411 MerR HTH family regulatory protein EP12_RS10330 PF02411 MerT mercuric transport protein EP12_RS10335 PF00403 Heavy-metal-associated domain EP12_RS10340 PF00403 Heavy-metal-associated domain EP12_RS10340 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS10340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_RS10350 PF13333 Integrase core domain EP12_RS10350 PF13276 HTH-like domain EP12_RS10350 PF00665 Integrase core domain EP12_RS10355 PF01527 Transposase EP12_RS10360 PF01526 Tn3 transposase DDE domain EP12_RS10360 PF13700 Domain of unknown function (DUF4158) EP12_RS10380 PF01381 Helix-turn-helix EP12_RS10400 PF00672 HAMP domain EP12_RS10400 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS10405 PF00486 Transcriptional regulatory protein, C terminal EP12_RS10405 PF00072 Response regulator receiver domain EP12_RS10415 PF07044 Protein of unknown function (DUF1329) EP12_RS10435 PF01180 Dihydroorotate dehydrogenase EP12_RS10440 PF10672 S-adenosylmethionine-dependent methyltransferase EP12_RS10440 PF02926 THUMP domain EP12_RS10440 PF01170 Putative RNA methylase family UPF0020 EP12_RS10450 PF12848 ABC transporter EP12_RS10450 PF00005 ABC transporter EP12_RS10450 PF16326 ABC transporter C-terminal domain EP12_RS10460 PF04957 Ribosome modulation factor EP12_RS10465 PF07977 FabA-like domain EP12_RS10475 PF03441 FAD binding domain of DNA photolyase EP12_RS10475 PF00875 DNA photolyase EP12_RS10480 PF00875 DNA photolyase EP12_RS10480 PF03441 FAD binding domain of DNA photolyase EP12_RS10485 PF00875 DNA photolyase EP12_RS10485 PF03441 FAD binding domain of DNA photolyase EP12_RS10490 PF04244 Deoxyribodipyrimidine photo-lyase-related protein EP12_RS10510 PF01219 Prokaryotic diacylglycerol kinase EP12_RS10515 PF00582 Universal stress protein family EP12_RS10535 PF00210 Ferritin-like domain EP12_RS10540 PF00210 Ferritin-like domain EP12_RS10550 PF00115 Cytochrome C and Quinol oxidase polypeptide I EP12_RS10565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EP12_RS10565 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EP12_RS10575 PF00403 Heavy-metal-associated domain EP12_RS10590 PF13545 Crp-like helix-turn-helix domain EP12_RS10590 PF00027 Cyclic nucleotide-binding domain EP12_RS10595 PF00582 Universal stress protein family EP12_RS10600 PF01171 PP-loop family EP12_RS10605 PF01734 Patatin-like phospholipase EP12_RS10625 PF01810 LysE type translocator EP12_RS10630 PF02146 Sir2 family EP12_RS10635 PF00581 Rhodanese-like domain EP12_RS10640 PF08534 Redoxin EP12_RS10645 PF03942 DTW domain EP12_RS10700 PF13356 Arm DNA-binding domain EP12_RS10700 PF00589 Phage integrase family EP12_RS10720 PF01066 CDP-alcohol phosphatidyltransferase EP12_RS10725 PF02151 UvrB/uvrC motif EP12_RS10725 PF01541 GIY-YIG catalytic domain EP12_RS10725 PF08459 UvrC Helix-hairpin-helix N-terminal EP12_RS10730 PF00196 Bacterial regulatory proteins, luxR family EP12_RS10730 PF00072 Response regulator receiver domain EP12_RS10735 PF02678 Pirin EP12_RS10735 PF17954 Quercetinase C-terminal cupin domain EP12_RS10740 PF00155 Aminotransferase class I and II EP12_RS10745 PF03781 Sulfatase-modifying factor enzyme 1 EP12_RS10745 PF12867 DinB superfamily EP12_RS10755 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EP12_RS10760 PF07681 DoxX EP12_RS10765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS10765 PF03466 LysR substrate binding domain EP12_RS10780 PF01027 Inhibitor of apoptosis-promoting Bax1 EP12_RS10785 PF02635 DsrE/DsrF-like family EP12_RS10800 PF04358 DsrC like protein EP12_RS10810 PF03783 Curli production assembly/transport component CsgG EP12_RS10820 PF05643 Putative bacterial lipoprotein (DUF799) EP12_RS10825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EP12_RS10825 PF02403 Seryl-tRNA synthetase N-terminal domain EP12_RS10830 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EP12_RS10835 PF16193 AAA C-terminal domain EP12_RS10835 PF12002 MgsA AAA+ ATPase C terminal EP12_RS10835 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS10840 PF03548 Outer membrane lipoprotein carrier protein LolA EP12_RS10845 PF09397 Ftsk gamma domain EP12_RS10845 PF17854 FtsK alpha domain EP12_RS10845 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EP12_RS10845 PF01580 FtsK/SpoIIIE family EP12_RS10850 PF01037 Lrp/AsnC ligand binding domain EP12_RS10855 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EP12_RS10855 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EP12_RS10860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EP12_RS10865 PF18073 Rubredoxin metal binding domain EP12_RS10880 PF00216 Bacterial DNA-binding protein EP12_RS10885 PF00575 S1 RNA binding domain EP12_RS10890 PF02224 Cytidylate kinase EP12_RS10895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EP12_RS10900 PF00266 Aminotransferase class-V EP12_RS10920 PF03477 ATP cone domain EP12_RS10920 PF00317 Ribonucleotide reductase, all-alpha domain EP12_RS10920 PF02867 Ribonucleotide reductase, barrel domain EP12_RS10925 PF00268 Ribonucleotide reductase, small chain EP12_RS10930 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS10955 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS10955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EP12_RS10960 PF00892 EamA-like transporter family EP12_RS10965 PF01259 SAICAR synthetase EP12_RS10970 PF06804 NlpB/DapX lipoprotein EP12_RS10975 PF00701 Dihydrodipicolinate synthetase family EP12_RS10985 PF00578 AhpC/TSA family EP12_RS10990 PF01594 AI-2E family transporter EP12_RS10995 PF13181 Tetratricopeptide repeat EP12_RS10995 PF01435 Peptidase family M48 EP12_RS11000 PF11412 Disulphide bond corrector protein DsbC EP12_RS11000 PF02683 Cytochrome C biogenesis protein transmembrane region EP12_RS11010 PF03358 NADPH-dependent FMN reductase EP12_RS11040 PF13411 MerR HTH family regulatory protein EP12_RS11050 PF00557 Metallopeptidase family M24 EP12_RS11055 PF01965 DJ-1/PfpI family EP12_RS11070 PF00308 Bacterial dnaA protein EP12_RS11100 PF00072 Response regulator receiver domain EP12_RS11100 PF00196 Bacterial regulatory proteins, luxR family EP12_RS11105 PF13649 Methyltransferase domain EP12_RS11130 PF00128 Alpha amylase, catalytic domain EP12_RS11135 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS11140 PF03453 MoeA N-terminal region (domain I and II) EP12_RS11140 PF00994 Probable molybdopterin binding domain EP12_RS11140 PF03454 MoeA C-terminal region (domain IV) EP12_RS11145 PF01554 MatE EP12_RS11165 PF00291 Pyridoxal-phosphate dependent enzyme EP12_RS11185 PF01527 Transposase EP12_RS11200 PF00378 Enoyl-CoA hydratase/isomerase EP12_RS11215 PF00255 Glutathione peroxidase EP12_RS11220 PF02525 Flavodoxin-like fold EP12_RS11225 PF01053 Cys/Met metabolism PLP-dependent enzyme EP12_RS11240 PF00155 Aminotransferase class I and II EP12_RS11250 PF01717 Cobalamin-independent synthase, Catalytic domain EP12_RS11250 PF08267 Cobalamin-independent synthase, N-terminal domain EP12_RS11260 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EP12_RS11275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_RS11275 PF12806 Acetyl-CoA dehydrogenase C-terminal like EP12_RS11275 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_RS11275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_RS11280 PF02311 AraC-like ligand binding domain EP12_RS11280 PF12833 Helix-turn-helix domain EP12_RS11285 PF00593 TonB dependent receptor EP12_RS11285 PF07715 TonB-dependent Receptor Plug Domain EP12_RS11295 PF00873 AcrB/AcrD/AcrF family EP12_RS11300 PF13533 Biotin-lipoyl like EP12_RS11310 PF00766 Electron transfer flavoprotein FAD-binding domain EP12_RS11310 PF01012 Electron transfer flavoprotein domain EP12_RS11315 PF01012 Electron transfer flavoprotein domain EP12_RS11325 PF00816 H-NS histone family EP12_RS11330 PF12697 Alpha/beta hydrolase family EP12_RS11340 PF00258 Flavodoxin EP12_RS11350 PF01475 Ferric uptake regulator family EP12_RS11355 PF01063 Amino-transferase class IV EP12_RS11360 PF02626 Carboxyltransferase domain, subdomain A and B EP12_RS11370 PF03746 LamB/YcsF family EP12_RS11375 PF17783 CvfB-like winged helix domain EP12_RS11375 PF13509 S1 domain EP12_RS11380 PF02566 OsmC-like protein EP12_RS11405 PF13286 Phosphohydrolase-associated domain EP12_RS11405 PF01966 HD domain EP12_RS11410 PF00196 Bacterial regulatory proteins, luxR family EP12_RS11415 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EP12_RS11420 PF07715 TonB-dependent Receptor Plug Domain EP12_RS11420 PF00593 TonB dependent receptor EP12_RS11425 PF00174 Oxidoreductase molybdopterin binding domain EP12_RS11435 PF09335 SNARE associated Golgi protein EP12_RS11445 PF02810 SEC-C motif EP12_RS11460 PF00583 Acetyltransferase (GNAT) family EP12_RS11465 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS11470 PF13460 NAD(P)H-binding EP12_RS11480 PF01026 TatD related DNase EP12_RS11485 PF09115 DNA polymerase III, delta subunit, C terminal EP12_RS11490 PF02223 Thymidylate kinase EP12_RS11495 PF02618 YceG-like family EP12_RS11500 PF01063 Amino-transferase class IV EP12_RS11510 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS11510 PF00107 Zinc-binding dehydrogenase EP12_RS11520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_RS11520 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_RS11520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_RS11545 PF04055 Radical SAM superfamily EP12_RS11545 PF06969 HemN C-terminal domain EP12_RS11550 PF03459 TOBE domain EP12_RS11550 PF10649 Protein of unknown function (DUF2478) EP12_RS11550 PF00005 ABC transporter EP12_RS11555 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS11565 PF02391 MoaE protein EP12_RS11570 PF02597 ThiS family EP12_RS11575 PF01967 MoaC family EP12_RS11580 PF00994 Probable molybdopterin binding domain EP12_RS11585 PF00899 ThiF family EP12_RS11605 PF00155 Aminotransferase class I and II EP12_RS11610 PF03435 Saccharopine dehydrogenase NADP binding domain EP12_RS11615 PF00155 Aminotransferase class I and II EP12_RS11640 PF13538 UvrD-like helicase C-terminal domain EP12_RS11645 PF00580 UvrD/REP helicase N-terminal domain EP12_RS11645 PF13361 UvrD-like helicase C-terminal domain EP12_RS11645 PF12705 PD-(D/E)XK nuclease superfamily EP12_RS11650 PF17946 RecC C-terminal domain EP12_RS11660 PF00501 AMP-binding enzyme EP12_RS11665 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS11665 PF00563 EAL domain EP12_RS11665 PF03707 Bacterial signalling protein N terminal repeat EP12_RS11670 PF12706 Beta-lactamase superfamily domain EP12_RS11670 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EP12_RS11670 PF17770 Ribonuclease J C-terminal domain EP12_RS11675 PF04337 Protein of unknown function, DUF480 EP12_RS11690 PF03466 LysR substrate binding domain EP12_RS11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS11695 PF04219 Protein of unknown function, DUF EP12_RS11705 PF01022 Bacterial regulatory protein, arsR family EP12_RS11725 PF00158 Sigma-54 interaction domain EP12_RS11725 PF02954 Bacterial regulatory protein, Fis family EP12_RS11725 PF00072 Response regulator receiver domain EP12_RS11735 PF08446 PAS fold EP12_RS11735 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS11735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS11735 PF01590 GAF domain EP12_RS11735 PF00360 Phytochrome region EP12_RS11740 PF00072 Response regulator receiver domain EP12_RS11745 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS11745 PF09308 LuxQ, periplasmic EP12_RS11745 PF00072 Response regulator receiver domain EP12_RS11745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS11790 PF07023 Protein of unknown function (DUF1315) EP12_RS11800 PF01235 Sodium:alanine symporter family EP12_RS11810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EP12_RS11810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EP12_RS11820 PF01641 SelR domain EP12_RS11825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_RS11825 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EP12_RS11830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EP12_RS11830 PF00128 Alpha amylase, catalytic domain EP12_RS11840 PF02446 4-alpha-glucanotransferase EP12_RS11850 PF01263 Aldose 1-epimerase EP12_RS11855 PF01081 KDPG and KHG aldolase EP12_RS11860 PF02685 Glucokinase EP12_RS11865 PF00920 Dehydratase family EP12_RS11875 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EP12_RS11875 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EP12_RS11880 PF01380 SIS domain EP12_RS11880 PF01418 Helix-turn-helix domain, rpiR family EP12_RS11885 PF00224 Pyruvate kinase, barrel domain EP12_RS11885 PF02887 Pyruvate kinase, alpha/beta domain EP12_RS11890 PF01048 Phosphorylase superfamily EP12_RS11930 PF00672 HAMP domain EP12_RS11930 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS11935 PF00072 Response regulator receiver domain EP12_RS11935 PF00486 Transcriptional regulatory protein, C terminal EP12_RS11960 PF09347 Domain of unknown function (DUF1989) EP12_RS11975 PF04962 KduI/IolB family EP12_RS11980 PF03480 Bacterial extracellular solute-binding protein, family 7 EP12_RS11995 PF00356 Bacterial regulatory proteins, lacI family EP12_RS12000 PF08666 SAF domain EP12_RS12000 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EP12_RS12005 PF02614 Glucuronate isomerase EP12_RS12010 PF08125 Mannitol dehydrogenase C-terminal domain EP12_RS12010 PF01232 Mannitol dehydrogenase Rossmann domain EP12_RS12015 PF00294 pfkB family carbohydrate kinase EP12_RS12020 PF13472 GDSL-like Lipase/Acylhydrolase family EP12_RS12030 PF07470 Glycosyl Hydrolase Family 88 EP12_RS12035 PF00295 Glycosyl hydrolases family 28 EP12_RS12040 PF01095 Pectinesterase EP12_RS12060 PF00873 AcrB/AcrD/AcrF family EP12_RS12070 PF00005 ABC transporter EP12_RS12085 PF00356 Bacterial regulatory proteins, lacI family EP12_RS12090 PF13378 Enolase C-terminal domain-like EP12_RS12090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EP12_RS12095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EP12_RS12095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_RS12110 PF00563 EAL domain EP12_RS12110 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS12110 PF03707 Bacterial signalling protein N terminal repeat EP12_RS12130 PF00486 Transcriptional regulatory protein, C terminal EP12_RS12130 PF00072 Response regulator receiver domain EP12_RS12135 PF00672 HAMP domain EP12_RS12135 PF16527 Two-component sensor protein CpxA, periplasmic domain EP12_RS12135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS12135 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS12140 PF00881 Nitroreductase family EP12_RS12145 PF11849 Domain of unknown function (DUF3369) EP12_RS12150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS12150 PF08447 PAS fold EP12_RS12150 PF08448 PAS fold EP12_RS12155 PF00939 Sodium:sulfate symporter transmembrane region EP12_RS12160 PF00692 dUTPase EP12_RS12165 PF10609 NUBPL iron-transfer P-loop NTPase EP12_RS12170 PF01588 Putative tRNA binding domain EP12_RS12170 PF09334 tRNA synthetases class I (M) EP12_RS12170 PF08264 Anticodon-binding domain of tRNA EP12_RS12175 PF08241 Methyltransferase domain EP12_RS12180 PF16123 Hydroxyacylglutathione hydrolase C-terminus EP12_RS12180 PF00753 Metallo-beta-lactamase superfamily EP12_RS12200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EP12_RS12205 PF00149 Calcineurin-like phosphoesterase EP12_RS12210 PF00245 Alkaline phosphatase EP12_RS12215 PF00245 Alkaline phosphatase EP12_RS12235 PF00107 Zinc-binding dehydrogenase EP12_RS12235 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS12240 PF03466 LysR substrate binding domain EP12_RS12245 PF04336 Acyl carrier protein phosphodiesterase EP12_RS12250 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EP12_RS12260 PF00156 Phosphoribosyl transferase domain EP12_RS12265 PF02674 Colicin V production protein EP12_RS12270 PF05036 Sporulation related domain EP12_RS12275 PF08245 Mur ligase middle domain EP12_RS12275 PF02875 Mur ligase family, glutamate ligase domain EP12_RS12280 PF17848 Acetyl-coA carboxylase zinc finger domain EP12_RS12280 PF01039 Carboxyl transferase domain EP12_RS12285 PF01416 tRNA pseudouridine synthase EP12_RS12310 PF02801 Beta-ketoacyl synthase, C-terminal domain EP12_RS12310 PF00109 Beta-ketoacyl synthase, N-terminal domain EP12_RS12390 PF02909 Tetracyclin repressor-like, C-terminal domain EP12_RS12390 PF00440 Bacterial regulatory proteins, tetR family EP12_RS12405 PF06974 Protein of unknown function (DUF1298) EP12_RS12405 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain EP12_RS12415 PF04286 Protein of unknown function (DUF445) EP12_RS12440 PF00326 Prolyl oligopeptidase family EP12_RS12440 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EP12_RS12445 PF00392 Bacterial regulatory proteins, gntR family EP12_RS12445 PF07840 FadR C-terminal domain EP12_RS12455 PF02600 Disulfide bond formation protein DsbB EP12_RS12460 PF13302 Acetyltransferase (GNAT) domain EP12_RS12465 PF03692 Putative zinc- or iron-chelating domain EP12_RS12470 PF01557 Fumarylacetoacetate (FAA) hydrolase family EP12_RS12480 PF05166 YcgL domain EP12_RS12485 PF00570 HRDC domain EP12_RS12485 PF01612 3'-5' exonuclease EP12_RS12490 PF13193 AMP-binding enzyme C-terminal domain EP12_RS12490 PF00501 AMP-binding enzyme EP12_RS12495 PF12697 Alpha/beta hydrolase family EP12_RS12510 PF00814 Glycoprotease family EP12_RS12515 PF06733 DEAD_2 EP12_RS12515 PF13307 Helicase C-terminal domain EP12_RS12560 PF08029 HisG, C-terminal domain EP12_RS12560 PF01634 ATP phosphoribosyltransferase EP12_RS12570 PF00155 Aminotransferase class I and II EP12_RS12575 PF00475 Imidazoleglycerol-phosphate dehydratase EP12_RS12585 PF00977 Histidine biosynthesis protein EP12_RS12590 PF00977 Histidine biosynthesis protein EP12_RS12595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EP12_RS12595 PF01502 Phosphoribosyl-AMP cyclohydrolase EP12_RS12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS12605 PF03466 LysR substrate binding domain EP12_RS12620 PF07715 TonB-dependent Receptor Plug Domain EP12_RS12620 PF00593 TonB dependent receptor EP12_RS12630 PF05191 Adenylate kinase, active site lid EP12_RS12635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS12635 PF00183 Hsp90 protein EP12_RS12640 PF02132 RecR protein EP12_RS12640 PF13662 Toprim domain EP12_RS12655 PF02575 YbaB/EbfC DNA-binding family EP12_RS12660 PF12170 DNA polymerase III tau subunit V interacting with alpha EP12_RS12660 PF12169 DNA polymerase III subunits gamma and tau domain III EP12_RS12665 PF00156 Phosphoribosyl transferase domain EP12_RS12675 PF05114 Protein of unknown function (DUF692) EP12_RS12685 PF12894 Anaphase-promoting complex subunit 4 WD40 domain EP12_RS12685 PF00400 WD domain, G-beta repeat EP12_RS12695 PF00563 EAL domain EP12_RS12695 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS12695 PF00360 Phytochrome region EP12_RS12695 PF01590 GAF domain EP12_RS12740 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_RS12740 PF17871 AAA lid domain EP12_RS12740 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS12740 PF07724 AAA domain (Cdc48 subfamily) EP12_RS12740 PF02861 Clp amino terminal domain, pathogenicity island component EP12_RS12745 PF02578 Multi-copper polyphenol oxidoreductase laccase EP12_RS12750 PF00849 RNA pseudouridylate synthase EP12_RS12750 PF01479 S4 domain EP12_RS12755 PF13525 Outer membrane lipoprotein EP12_RS12765 PF04545 Sigma-70, region 4 EP12_RS12765 PF04542 Sigma-70 region 2 EP12_RS12780 PF00106 short chain dehydrogenase EP12_RS12800 PF13677 Membrane MotB of proton-channel complex MotA/MotB EP12_RS12800 PF00691 OmpA family EP12_RS12805 PF01618 MotA/TolQ/ExbB proton channel family EP12_RS12810 PF02609 Exonuclease VII small subunit EP12_RS12815 PF00348 Polyprenyl synthetase EP12_RS12820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EP12_RS12820 PF02779 Transketolase, pyrimidine binding domain EP12_RS12820 PF02780 Transketolase, C-terminal domain EP12_RS12825 PF04608 Phosphatidylglycerophosphatase A EP12_RS12830 PF00586 AIR synthase related protein, N-terminal domain EP12_RS12830 PF02769 AIR synthase related protein, C-terminal domain EP12_RS12835 PF01029 NusB family EP12_RS12840 PF00885 6,7-dimethyl-8-ribityllumazine synthase EP12_RS12845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EP12_RS12845 PF00925 GTP cyclohydrolase II EP12_RS12850 PF00677 Lumazine binding domain EP12_RS12855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EP12_RS12855 PF01872 RibD C-terminal domain EP12_RS12860 PF03477 ATP cone domain EP12_RS12865 PF00464 Serine hydroxymethyltransferase EP12_RS12870 PF14602 Hexapeptide repeat of succinyl-transferase EP12_RS12870 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS12870 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EP12_RS12885 PF18073 Rubredoxin metal binding domain EP12_RS12895 PF18429 Domain of unknown function (DUF5609) EP12_RS12905 PF01026 TatD related DNase EP12_RS12910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EP12_RS12910 PF01243 Pyridoxamine 5'-phosphate oxidase EP12_RS12915 PF07650 KH domain EP12_RS12915 PF01926 50S ribosome-binding GTPase EP12_RS12920 PF14622 Ribonuclease-III-like EP12_RS12920 PF00035 Double-stranded RNA binding motif EP12_RS12925 PF10502 Signal peptidase, peptidase S26 EP12_RS12930 PF00009 Elongation factor Tu GTP binding domain EP12_RS12930 PF06421 GTP-binding protein LepA C-terminus EP12_RS12930 PF03144 Elongation factor Tu domain 2 EP12_RS12930 PF00679 Elongation factor G C-terminus EP12_RS12940 PF03888 MucB/RseB N-terminal domain EP12_RS12940 PF17188 MucB/RseB C-terminal domain EP12_RS12950 PF04542 Sigma-70 region 2 EP12_RS12950 PF08281 Sigma-70, region 4 EP12_RS12970 PF03937 Flavinator of succinate dehydrogenase EP12_RS12980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_RS12985 PF00543 Nitrogen regulatory protein P-II EP12_RS12990 PF02540 NAD synthase EP12_RS13025 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor EP12_RS13025 PF07963 Prokaryotic N-terminal methylation motif EP12_RS13050 PF02401 LytB protein EP12_RS13055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_RS13060 PF01252 Signal peptidase (SPase) II EP12_RS13070 PF06574 FAD synthetase EP12_RS13070 PF01687 Riboflavin kinase EP12_RS13075 PF03023 Lipid II flippase MurJ EP12_RS13080 PF01649 Ribosomal protein S20 EP12_RS13085 PF00106 short chain dehydrogenase EP12_RS13100 PF07687 Peptidase dimerisation domain EP12_RS13100 PF01546 Peptidase family M20/M25/M40 EP12_RS13115 PF00216 Bacterial DNA-binding protein EP12_RS13120 PF02190 ATP-dependent protease La (LON) substrate-binding domain EP12_RS13120 PF05362 Lon protease (S16) C-terminal proteolytic domain EP12_RS13120 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS13125 PF07724 AAA domain (Cdc48 subfamily) EP12_RS13125 PF10431 C-terminal, D2-small domain, of ClpB protein EP12_RS13125 PF06689 ClpX C4-type zinc finger EP12_RS13130 PF00574 Clp protease EP12_RS13135 PF05698 Bacterial trigger factor protein (TF) C-terminus EP12_RS13135 PF05697 Bacterial trigger factor protein (TF) EP12_RS13135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_RS13165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EP12_RS13165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EP12_RS13175 PF18389 TrmO C-terminal domain EP12_RS13175 PF01980 tRNA-methyltransferase O EP12_RS13180 PF03129 Anticodon binding domain EP12_RS13180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EP12_RS13190 PF02253 Phospholipase A1 EP12_RS13195 PF00850 Histone deacetylase domain EP12_RS13205 PF02540 NAD synthase EP12_RS13205 PF00958 GMP synthase C terminal domain EP12_RS13205 PF00117 Glutamine amidotransferase class-I EP12_RS13210 PF00478 IMP dehydrogenase / GMP reductase domain EP12_RS13210 PF00571 CBS domain EP12_RS13215 PF13742 OB-fold nucleic acid binding domain EP12_RS13215 PF02601 Exonuclease VII, large subunit EP12_RS13230 PF13360 PQQ-like domain EP12_RS13235 PF09976 Tetratricopeptide repeat-like domain EP12_RS13240 PF13393 Histidyl-tRNA synthetase EP12_RS13240 PF03129 Anticodon binding domain EP12_RS13245 PF04551 GcpE protein EP12_RS13260 PF04055 Radical SAM superfamily EP12_RS13265 PF00334 Nucleoside diphosphate kinase EP12_RS13270 PF02657 Fe-S metabolism associated domain EP12_RS13275 PF01883 Iron-sulfur cluster assembly protein EP12_RS13280 PF01521 Iron-sulphur cluster biosynthesis EP12_RS13285 PF00266 Aminotransferase class-V EP12_RS13290 PF01458 Uncharacterized protein family (UPF0051) EP12_RS13295 PF00005 ABC transporter EP12_RS13305 PF00266 Aminotransferase class-V EP12_RS13310 PF02082 Transcriptional regulator EP12_RS13315 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS13315 PF06426 Serine acetyltransferase, N-terminal EP12_RS13320 PF00588 SpoU rRNA Methylase family EP12_RS13325 PF00459 Inositol monophosphatase family EP12_RS13340 PF07549 SecD/SecF GG Motif EP12_RS13340 PF02355 Protein export membrane protein EP12_RS13345 PF07549 SecD/SecF GG Motif EP12_RS13345 PF13721 SecD export protein N-terminal TM region EP12_RS13345 PF02355 Protein export membrane protein EP12_RS13350 PF02699 Preprotein translocase subunit EP12_RS13355 PF01702 Queuine tRNA-ribosyltransferase EP12_RS13360 PF02547 Queuosine biosynthesis protein EP12_RS13375 PF04012 PspA/IM30 family EP12_RS13380 PF07885 Ion channel EP12_RS13400 PF03738 Glutathionylspermidine synthase preATP-grasp EP12_RS13415 PF04960 Glutaminase EP12_RS13420 PF00245 Alkaline phosphatase EP12_RS13430 PF00463 Isocitrate lyase family EP12_RS13435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS13435 PF03466 LysR substrate binding domain EP12_RS13440 PF01274 Malate synthase EP12_RS13465 PF01565 FAD binding domain EP12_RS13465 PF02913 FAD linked oxidases, C-terminal domain EP12_RS13470 PF13180 PDZ domain EP12_RS13470 PF17820 PDZ domain EP12_RS13490 PF00483 Nucleotidyl transferase EP12_RS13490 PF14602 Hexapeptide repeat of succinyl-transferase EP12_RS13490 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS13525 PF00733 Asparagine synthase EP12_RS13525 PF13537 Glutamine amidotransferase domain EP12_RS13530 PF01757 Acyltransferase family EP12_RS13535 PF00534 Glycosyl transferases group 1 EP12_RS13535 PF13439 Glycosyltransferase Family 4 EP12_RS13570 PF00535 Glycosyl transferase family 2 EP12_RS13580 PF00535 Glycosyl transferase family 2 EP12_RS13595 PF13439 Glycosyltransferase Family 4 EP12_RS13600 PF13439 Glycosyltransferase Family 4 EP12_RS13600 PF00534 Glycosyl transferases group 1 EP12_RS13615 PF01522 Polysaccharide deacetylase EP12_RS13620 PF02397 Bacterial sugar transferase EP12_RS13635 PF13614 AAA domain EP12_RS13645 PF13401 AAA domain EP12_RS13645 PF01471 Putative peptidoglycan binding domain EP12_RS13650 PF01467 Cytidylyltransferase-like EP12_RS13650 PF00294 pfkB family carbohydrate kinase EP12_RS13655 PF01541 GIY-YIG catalytic domain EP12_RS13675 PF03279 Bacterial lipid A biosynthesis acyltransferase EP12_RS13685 PF02770 Acyl-CoA dehydrogenase, middle domain EP12_RS13685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EP12_RS13685 PF09317 Domain of unknown function (DUF1974) EP12_RS13685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EP12_RS13700 PF03707 Bacterial signalling protein N terminal repeat EP12_RS13700 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS13700 PF00563 EAL domain EP12_RS13705 PF00265 Thymidine kinase EP12_RS13710 PF00356 Bacterial regulatory proteins, lacI family EP12_RS13750 PF01926 50S ribosome-binding GTPase EP12_RS13755 PF00588 SpoU rRNA Methylase family EP12_RS13755 PF08032 RNA 2'-O ribose methyltransferase substrate binding EP12_RS13785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_RS13785 PF00378 Enoyl-CoA hydratase/isomerase EP12_RS13785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_RS13800 PF05971 RNA methyltransferase EP12_RS13835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_RS13845 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS13845 PF01799 [2Fe-2S] binding domain EP12_RS13850 PF00941 FAD binding domain in molybdopterin dehydrogenase EP12_RS13850 PF03450 CO dehydrogenase flavoprotein C-terminal domain EP12_RS13855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EP12_RS13855 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EP12_RS13860 PF00881 Nitroreductase family EP12_RS13865 PF01295 Adenylate cyclase, class-I EP12_RS13865 PF12633 Adenylate cyclase NT domain EP12_RS13870 PF00072 Response regulator receiver domain EP12_RS13870 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS13875 PF00144 Beta-lactamase EP12_RS13875 PF11954 Domain of unknown function (DUF3471) EP12_RS13900 PF01738 Dienelactone hydrolase family EP12_RS13910 PF00128 Alpha amylase, catalytic domain EP12_RS13920 PF01965 DJ-1/PfpI family EP12_RS13935 PF03466 LysR substrate binding domain EP12_RS13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS13945 PF01979 Amidohydrolase family EP12_RS13955 PF08281 Sigma-70, region 4 EP12_RS13955 PF04542 Sigma-70 region 2 EP12_RS13980 PF07715 TonB-dependent Receptor Plug Domain EP12_RS13980 PF00593 TonB dependent receptor EP12_RS13995 PF03631 Virulence factor BrkB EP12_RS14000 PF00196 Bacterial regulatory proteins, luxR family EP12_RS14000 PF00072 Response regulator receiver domain EP12_RS14020 PF00593 TonB dependent receptor EP12_RS14020 PF07660 Secretin and TonB N terminus short domain EP12_RS14020 PF07715 TonB-dependent Receptor Plug Domain EP12_RS14040 PF03965 Penicillinase repressor EP12_RS14070 PF07152 YaeQ protein EP12_RS14080 PF00083 Sugar (and other) transporter EP12_RS14090 PF12833 Helix-turn-helix domain EP12_RS14100 PF00331 Glycosyl hydrolase family 10 EP12_RS14110 PF04616 Glycosyl hydrolases family 43 EP12_RS14115 PF00331 Glycosyl hydrolase family 10 EP12_RS14125 PF00456 Transketolase, thiamine diphosphate binding domain EP12_RS14125 PF02779 Transketolase, pyrimidine binding domain EP12_RS14125 PF02780 Transketolase, C-terminal domain EP12_RS14135 PF04616 Glycosyl hydrolases family 43 EP12_RS14135 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EP12_RS14140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_RS14145 PF00923 Transaldolase/Fructose-6-phosphate aldolase EP12_RS14185 PF16124 RecQ zinc-binding EP12_RS14185 PF00570 HRDC domain EP12_RS14185 PF00271 Helicase conserved C-terminal domain EP12_RS14185 PF00270 DEAD/DEAH box helicase EP12_RS14185 PF09382 RQC domain EP12_RS14190 PF12697 Alpha/beta hydrolase family EP12_RS14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS14210 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS14210 PF01627 Hpt domain EP12_RS14210 PF00072 Response regulator receiver domain EP12_RS14210 PF00672 HAMP domain EP12_RS14210 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EP12_RS14215 PF04542 Sigma-70 region 2 EP12_RS14215 PF08281 Sigma-70, region 4 EP12_RS14220 PF00561 alpha/beta hydrolase fold EP12_RS14225 PF02566 OsmC-like protein EP12_RS14230 PF01625 Peptide methionine sulfoxide reductase EP12_RS14245 PF00005 ABC transporter EP12_RS14250 PF00271 Helicase conserved C-terminal domain EP12_RS14250 PF00270 DEAD/DEAH box helicase EP12_RS14265 PF00596 Class II Aldolase and Adducin N-terminal domain EP12_RS14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS14270 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS14270 PF00989 PAS fold EP12_RS14270 PF11808 Phosphate regulon sensor protein PhoR EP12_RS14285 PF03786 D-mannonate dehydratase (UxuA) EP12_RS14300 PF12728 Helix-turn-helix domain EP12_RS14300 PF02661 Fic/DOC family EP12_RS14325 PF09614 CRISPR-associated protein (Cas_Csy2) EP12_RS14330 PF09611 CRISPR-associated protein (Cas_Csy1) EP12_RS14345 PF01867 CRISPR associated protein Cas1 EP12_RS14380 PF00403 Heavy-metal-associated domain EP12_RS14385 PF02411 MerT mercuric transport protein EP12_RS14390 PF09278 MerR, DNA binding EP12_RS14390 PF00376 MerR family regulatory protein EP12_RS14400 PF02347 Glycine cleavage system P-protein EP12_RS14405 PF01597 Glycine cleavage H-protein EP12_RS14410 PF08669 Glycine cleavage T-protein C-terminal barrel domain EP12_RS14410 PF01571 Aminomethyltransferase folate-binding domain EP12_RS14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS14415 PF03466 LysR substrate binding domain EP12_RS14420 PF00557 Metallopeptidase family M24 EP12_RS14420 PF01321 Creatinase/Prolidase N-terminal domain EP12_RS14430 PF01494 FAD binding domain EP12_RS14435 PF01494 FAD binding domain EP12_RS14440 PF05195 Aminopeptidase P, N-terminal domain EP12_RS14440 PF00557 Metallopeptidase family M24 EP12_RS14445 PF03695 Uncharacterised protein family (UPF0149) EP12_RS14450 PF00294 pfkB family carbohydrate kinase EP12_RS14455 PF01156 Inosine-uridine preferring nucleoside hydrolase EP12_RS14460 PF01812 5-formyltetrahydrofolate cyclo-ligase family EP12_RS14465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EP12_RS14470 PF01842 ACT domain EP12_RS14470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP12_RS14470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_RS14500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EP12_RS14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS14505 PF03466 LysR substrate binding domain EP12_RS14510 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS14510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_RS14515 PF00364 Biotin-requiring enzyme EP12_RS14515 PF02817 e3 binding domain EP12_RS14515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EP12_RS14520 PF17831 Pyruvate dehydrogenase E1 component middle domain EP12_RS14520 PF00456 Transketolase, thiamine diphosphate binding domain EP12_RS14525 PF07729 FCD domain EP12_RS14525 PF00392 Bacterial regulatory proteins, gntR family EP12_RS14545 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EP12_RS14545 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EP12_RS14550 PF07963 Prokaryotic N-terminal methylation motif EP12_RS14555 PF00482 Type II secretion system (T2SS), protein F EP12_RS14560 PF06750 Bacterial Peptidase A24 N-terminal domain EP12_RS14560 PF01478 Type IV leader peptidase family EP12_RS14565 PF01121 Dephospho-CoA kinase EP12_RS14570 PF07072 Cell division protein EP12_RS14575 PF03884 DNA gyrase inhibitor YacG EP12_RS14585 PF00356 Bacterial regulatory proteins, lacI family EP12_RS14590 PF01306 LacY proton/sugar symporter EP12_RS14600 PF00083 Sugar (and other) transporter EP12_RS14605 PF07980 SusD family EP12_RS14605 PF14322 Starch-binding associating with outer membrane EP12_RS14615 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EP12_RS14620 PF00293 NUDIX domain EP12_RS14630 PF01551 Peptidase family M23 EP12_RS14630 PF08525 Opacity-associated protein A N-terminal motif EP12_RS14630 PF01476 LysM domain EP12_RS14635 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EP12_RS14640 PF12327 FtsZ family, C-terminal domain EP12_RS14640 PF00091 Tubulin/FtsZ family, GTPase domain EP12_RS14645 PF02491 SHS2 domain inserted in FTSA EP12_RS14650 PF03799 Cell division protein FtsQ EP12_RS14650 PF08478 POTRA domain, FtsQ-type EP12_RS14655 PF01820 D-ala D-ala ligase N-terminus EP12_RS14655 PF07478 D-ala D-ala ligase C-terminus EP12_RS14660 PF08245 Mur ligase middle domain EP12_RS14660 PF01225 Mur ligase family, catalytic domain EP12_RS14660 PF02875 Mur ligase family, glutamate ligase domain EP12_RS14670 PF01098 Cell cycle protein EP12_RS14675 PF02875 Mur ligase family, glutamate ligase domain EP12_RS14675 PF08245 Mur ligase middle domain EP12_RS14685 PF02875 Mur ligase family, glutamate ligase domain EP12_RS14685 PF01225 Mur ligase family, catalytic domain EP12_RS14685 PF08245 Mur ligase middle domain EP12_RS14700 PF04999 Cell division protein FtsL EP12_RS14705 PF01795 MraW methylase family EP12_RS14710 PF02381 MraZ protein, putative antitoxin-like EP12_RS14720 PF01244 Membrane dipeptidase (Peptidase family M19) EP12_RS14725 PF00873 AcrB/AcrD/AcrF family EP12_RS14750 PF08534 Redoxin EP12_RS14750 PF00462 Glutaredoxin EP12_RS14755 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS14765 PF00158 Sigma-54 interaction domain EP12_RS14765 PF00072 Response regulator receiver domain EP12_RS14765 PF02954 Bacterial regulatory protein, Fis family EP12_RS14775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EP12_RS14775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EP12_RS14780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EP12_RS14780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EP12_RS14815 PF05552 Conserved TM helix EP12_RS14815 PF00924 Mechanosensitive ion channel EP12_RS14825 PF04452 RNA methyltransferase EP12_RS14830 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EP12_RS14830 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EP12_RS14835 PF02622 Uncharacterized ACR, COG1678 EP12_RS14840 PF03652 Holliday junction resolvase EP12_RS14850 PF00437 Type II/IV secretion system protein EP12_RS14855 PF00437 Type II/IV secretion system protein EP12_RS14860 PF01168 Alanine racemase, N-terminal domain EP12_RS14865 PF03807 NADP oxidoreductase coenzyme F420-dependent EP12_RS14865 PF14748 Pyrroline-5-carboxylate reductase dimerisation EP12_RS14870 PF02325 YGGT family EP12_RS14895 PF08787 Alginate lyase EP12_RS14910 PF03591 AzlC protein EP12_RS14925 PF03883 Peroxide stress protein YaaA EP12_RS14930 PF00923 Transaldolase/Fructose-6-phosphate aldolase EP12_RS14935 PF00342 Phosphoglucose isomerase EP12_RS14940 PF03167 Uracil DNA glycosylase superfamily EP12_RS14945 PF14821 Threonine synthase N terminus EP12_RS14945 PF00291 Pyridoxal-phosphate dependent enzyme EP12_RS14950 PF00288 GHMP kinases N terminal domain EP12_RS14950 PF08544 GHMP kinases C terminal EP12_RS14955 PF03447 Homoserine dehydrogenase, NAD binding domain EP12_RS14955 PF01842 ACT domain EP12_RS14955 PF00742 Homoserine dehydrogenase EP12_RS14955 PF00696 Amino acid kinase family EP12_RS14955 PF13840 ACT domain EP12_RS14960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS14960 PF03466 LysR substrate binding domain EP12_RS14965 PF00107 Zinc-binding dehydrogenase EP12_RS14965 PF08240 Alcohol dehydrogenase GroES-like domain EP12_RS14975 PF01022 Bacterial regulatory protein, arsR family EP12_RS14985 PF03358 NADPH-dependent FMN reductase EP12_RS14990 PF01758 Sodium Bile acid symporter family EP12_RS14995 PF00072 Response regulator receiver domain EP12_RS15000 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EP12_RS15005 PF00072 Response regulator receiver domain EP12_RS15005 PF00486 Transcriptional regulatory protein, C terminal EP12_RS15010 PF07689 KaiB domain EP12_RS15010 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS15025 PF00291 Pyridoxal-phosphate dependent enzyme EP12_RS15035 PF03435 Saccharopine dehydrogenase NADP binding domain EP12_RS15035 PF16653 Saccharopine dehydrogenase C-terminal domain EP12_RS15040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EP12_RS15050 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS15055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EP12_RS15065 PF02021 Uncharacterised protein family UPF0102 EP12_RS15070 PF13580 SIS domain EP12_RS15075 PF04972 BON domain EP12_RS15080 PF07690 Major Facilitator Superfamily EP12_RS15085 PF00593 TonB dependent receptor EP12_RS15085 PF07715 TonB-dependent Receptor Plug Domain EP12_RS15105 PF00285 Citrate synthase, C-terminal domain EP12_RS15115 PF04303 PrpF protein EP12_RS15120 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS15125 PF00474 Sodium:solute symporter family EP12_RS15140 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS15140 PF00072 Response regulator receiver domain EP12_RS15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS15140 PF18415 Histidine kinase receptor ArcB trans-membrane domain EP12_RS15140 PF00989 PAS fold EP12_RS15140 PF01627 Hpt domain EP12_RS15145 PF01510 N-acetylmuramoyl-L-alanine amidase EP12_RS15150 PF01645 Conserved region in glutamate synthase EP12_RS15150 PF00310 Glutamine amidotransferases class-II EP12_RS15150 PF04898 Glutamate synthase central domain EP12_RS15150 PF01493 GXGXG motif EP12_RS15155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EP12_RS15155 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS15170 PF01048 Phosphorylase superfamily EP12_RS15180 PF00657 GDSL-like Lipase/Acylhydrolase EP12_RS15200 PF18370 Rhamnogalacturonan I lyases beta-sheet domain EP12_RS15205 PF01070 FMN-dependent dehydrogenase EP12_RS15210 PF01261 Xylose isomerase-like TIM barrel EP12_RS15215 PF00596 Class II Aldolase and Adducin N-terminal domain EP12_RS15220 PF08220 DeoR-like helix-turn-helix domain EP12_RS15220 PF00455 DeoR C terminal sensor domain EP12_RS15230 PF00294 pfkB family carbohydrate kinase EP12_RS15235 PF01614 Bacterial transcriptional regulator EP12_RS15235 PF09339 IclR helix-turn-helix domain EP12_RS15255 PF07470 Glycosyl Hydrolase Family 88 EP12_RS15270 PF05336 L-rhamnose mutarotase EP12_RS15285 PF00581 Rhodanese-like domain EP12_RS15295 PF07237 Protein of unknown function (DUF1428) EP12_RS15300 PF01479 S4 domain EP12_RS15300 PF00579 tRNA synthetases class I (W and Y) EP12_RS15305 PF10145 Phage-related minor tail protein EP12_RS15305 PF01551 Peptidase family M23 EP12_RS15305 PF01464 Transglycosylase SLT domain EP12_RS15310 PF03702 Anhydro-N-acetylmuramic acid kinase EP12_RS15315 PF00072 Response regulator receiver domain EP12_RS15325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EP12_RS15335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_RS15340 PF00043 Glutathione S-transferase, C-terminal domain EP12_RS15340 PF13417 Glutathione S-transferase, N-terminal domain EP12_RS15345 PF01521 Iron-sulphur cluster biosynthesis EP12_RS15360 PF03976 Polyphosphate kinase 2 (PPK2) EP12_RS15365 PF03776 Septum formation topological specificity factor MinE EP12_RS15370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EP12_RS15375 PF03775 Septum formation inhibitor MinC, C-terminal domain EP12_RS15375 PF05209 Septum formation inhibitor MinC, N-terminal domain EP12_RS15380 PF10415 Fumarase C C-terminus EP12_RS15380 PF00206 Lyase EP12_RS15385 PF00127 Copper binding proteins, plastocyanin/azurin family EP12_RS15405 PF03653 Uncharacterised protein family (UPF0093) EP12_RS15420 PF01566 Natural resistance-associated macrophage protein EP12_RS15430 PF00072 Response regulator receiver domain EP12_RS15430 PF00196 Bacterial regulatory proteins, luxR family EP12_RS15435 PF03144 Elongation factor Tu domain 2 EP12_RS15435 PF00009 Elongation factor Tu GTP binding domain EP12_RS15435 PF00679 Elongation factor G C-terminus EP12_RS15440 PF00120 Glutamine synthetase, catalytic domain EP12_RS15440 PF03951 Glutamine synthetase, beta-Grasp domain EP12_RS15450 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS15450 PF00989 PAS fold EP12_RS15455 PF02954 Bacterial regulatory protein, Fis family EP12_RS15455 PF00072 Response regulator receiver domain EP12_RS15455 PF00158 Sigma-54 interaction domain EP12_RS15460 PF00072 Response regulator receiver domain EP12_RS15465 PF01553 Acyltransferase EP12_RS15470 PF06877 Regulator of ribonuclease activity B EP12_RS15490 PF01627 Hpt domain EP12_RS15490 PF00072 Response regulator receiver domain EP12_RS15490 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS15490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EP12_RS15490 PF00672 HAMP domain EP12_RS15495 PF08264 Anticodon-binding domain of tRNA EP12_RS15495 PF00133 tRNA synthetases class I (I, L, M and V) EP12_RS15495 PF10458 Valyl tRNA synthetase tRNA binding arm EP12_RS15500 PF04364 DNA polymerase III chi subunit, HolC EP12_RS15505 PF02789 Cytosol aminopeptidase family, N-terminal domain EP12_RS15505 PF00883 Cytosol aminopeptidase family, catalytic domain EP12_RS15515 PF00672 HAMP domain EP12_RS15515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS15515 PF12729 Four helix bundle sensory module for signal transduction EP12_RS15520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS15520 PF00672 HAMP domain EP12_RS15525 PF00274 Fructose-bisphosphate aldolase class-I EP12_RS15550 PF00528 Binding-protein-dependent transport system inner membrane component EP12_RS15555 PF00005 ABC transporter EP12_RS15555 PF17912 MalK OB fold domain EP12_RS15560 PF17912 MalK OB fold domain EP12_RS15560 PF03459 TOBE domain EP12_RS15560 PF00005 ABC transporter EP12_RS15565 PF01590 GAF domain EP12_RS15565 PF02954 Bacterial regulatory protein, Fis family EP12_RS15565 PF00158 Sigma-54 interaction domain EP12_RS15570 PF00121 Triosephosphate isomerase EP12_RS15575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EP12_RS15580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EP12_RS15585 PF01266 FAD dependent oxidoreductase EP12_RS15585 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EP12_RS15590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EP12_RS15590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EP12_RS15595 PF08402 TOBE domain EP12_RS15595 PF00005 ABC transporter EP12_RS15610 PF03739 Lipopolysaccharide export system permease LptF/LptG EP12_RS15615 PF03739 Lipopolysaccharide export system permease LptF/LptG EP12_RS15625 PF01614 Bacterial transcriptional regulator EP12_RS15625 PF09339 IclR helix-turn-helix domain EP12_RS15630 PF00474 Sodium:solute symporter family EP12_RS15645 PF05853 beta-keto acid cleavage enzyme EP12_RS15650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EP12_RS15650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EP12_RS15690 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EP12_RS15705 PF04820 Tryptophan halogenase EP12_RS15710 PF04820 Tryptophan halogenase EP12_RS15720 PF07729 FCD domain EP12_RS15720 PF00392 Bacterial regulatory proteins, gntR family EP12_RS15730 PF16355 Domain of unknown function (DUF4982) EP12_RS15730 PF02837 Glycosyl hydrolases family 2, sugar binding domain EP12_RS15730 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EP12_RS15730 PF00703 Glycosyl hydrolases family 2 EP12_RS15730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EP12_RS15745 PF04820 Tryptophan halogenase EP12_RS15750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EP12_RS15750 PF13378 Enolase C-terminal domain-like EP12_RS15755 PF03648 Glycosyl hydrolase family 67 N-terminus EP12_RS15755 PF07488 Glycosyl hydrolase family 67 middle domain EP12_RS15755 PF07477 Glycosyl hydrolase family 67 C-terminus EP12_RS15770 PF14685 Tricorn protease PDZ domain EP12_RS15770 PF14684 Tricorn protease C1 domain EP12_RS15770 PF07676 WD40-like Beta Propeller Repeat EP12_RS15770 PF03572 Peptidase family S41 EP12_RS15775 PF00593 TonB dependent receptor EP12_RS15810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EP12_RS15810 PF08447 PAS fold EP12_RS15810 PF13426 PAS domain EP12_RS15815 PF00375 Sodium:dicarboxylate symporter family EP12_RS15825 PF00593 TonB dependent receptor EP12_RS15825 PF07715 TonB-dependent Receptor Plug Domain EP12_RS15830 PF01497 Periplasmic binding protein EP12_RS15835 PF01032 FecCD transport family EP12_RS15845 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EP12_RS15845 PF05221 S-adenosyl-L-homocysteine hydrolase EP12_RS15875 PF08787 Alginate lyase EP12_RS15880 PF00356 Bacterial regulatory proteins, lacI family EP12_RS15900 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS15915 PF12697 Alpha/beta hydrolase family EP12_RS15925 PF11838 ERAP1-like C-terminal domain EP12_RS15925 PF01433 Peptidase family M1 domain EP12_RS15930 PF00005 ABC transporter EP12_RS15950 PF00270 DEAD/DEAH box helicase EP12_RS15950 PF00271 Helicase conserved C-terminal domain EP12_RS15955 PF01081 KDPG and KHG aldolase EP12_RS15960 PF00294 pfkB family carbohydrate kinase EP12_RS15965 PF14592 Chondroitinase B EP12_RS15970 PF00392 Bacterial regulatory proteins, gntR family EP12_RS15970 PF07729 FCD domain EP12_RS15975 PF12795 Mechanosensitive ion channel porin domain EP12_RS15975 PF00924 Mechanosensitive ion channel EP12_RS15975 PF12794 Mechanosensitive ion channel inner membrane domain 1 EP12_RS15980 PF12833 Helix-turn-helix domain EP12_RS15980 PF06719 AraC-type transcriptional regulator N-terminus EP12_RS15990 PF00141 Peroxidase EP12_RS16000 PF02254 TrkA-N domain EP12_RS16000 PF00999 Sodium/hydrogen exchanger family EP12_RS16015 PF03372 Endonuclease/Exonuclease/phosphatase family EP12_RS16020 PF03466 LysR substrate binding domain EP12_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS16030 PF01925 Sulfite exporter TauE/SafE EP12_RS16035 PF00155 Aminotransferase class I and II EP12_RS16040 PF00072 Response regulator receiver domain EP12_RS16040 PF08769 Sporulation initiation factor Spo0A C terminal EP12_RS16055 PF00136 DNA polymerase family B EP12_RS16055 PF03104 DNA polymerase family B, exonuclease domain EP12_RS16090 PF05958 tRNA (Uracil-5-)-methyltransferase EP12_RS16095 PF00440 Bacterial regulatory proteins, tetR family EP12_RS16105 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS16105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_RS16115 PF03167 Uracil DNA glycosylase superfamily EP12_RS16120 PF03707 Bacterial signalling protein N terminal repeat EP12_RS16120 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS16120 PF00563 EAL domain EP12_RS16130 PF01507 Phosphoadenosine phosphosulfate reductase family EP12_RS16135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EP12_RS16135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EP12_RS16140 PF00175 Oxidoreductase NAD-binding domain EP12_RS16140 PF00667 FAD binding domain EP12_RS16140 PF00258 Flavodoxin EP12_RS16165 PF04012 PspA/IM30 family EP12_RS16180 PF01207 Dihydrouridine synthase (Dus) EP12_RS16195 PF13454 FAD-NAD(P)-binding EP12_RS16210 PF05362 Lon protease (S16) C-terminal proteolytic domain EP12_RS16210 PF02190 ATP-dependent protease La (LON) substrate-binding domain EP12_RS16210 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS16220 PF00756 Putative esterase EP12_RS16225 PF01553 Acyltransferase EP12_RS16230 PF01553 Acyltransferase EP12_RS16235 PF00924 Mechanosensitive ion channel EP12_RS16250 PF01370 NAD dependent epimerase/dehydratase family EP12_RS16255 PF00209 Sodium:neurotransmitter symporter family EP12_RS16270 PF01625 Peptide methionine sulfoxide reductase EP12_RS16285 PF00258 Flavodoxin EP12_RS16295 PF02472 Biopolymer transport protein ExbD/TolR EP12_RS16305 PF13181 Tetratricopeptide repeat EP12_RS16305 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) EP12_RS16310 PF01270 Glycosyl hydrolases family 8 EP12_RS16335 PF05175 Methyltransferase small domain EP12_RS16345 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EP12_RS16345 PF00326 Prolyl oligopeptidase family EP12_RS16350 PF08000 Bacterial PH domain EP12_RS16355 PF08448 PAS fold EP12_RS16355 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS16355 PF00563 EAL domain EP12_RS16360 PF00291 Pyridoxal-phosphate dependent enzyme EP12_RS16365 PF07969 Amidohydrolase family EP12_RS16370 PF00753 Metallo-beta-lactamase superfamily EP12_RS16380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS16380 PF03466 LysR substrate binding domain EP12_RS16405 PF13230 Glutamine amidotransferases class-II EP12_RS16430 PF01037 Lrp/AsnC ligand binding domain EP12_RS16450 PF02687 FtsX-like permease family EP12_RS16450 PF00005 ABC transporter EP12_RS16450 PF12704 MacB-like periplasmic core domain EP12_RS16465 PF09905 DNA-binding protein VF530 EP12_RS16470 PF02447 GntP family permease EP12_RS16480 PF00356 Bacterial regulatory proteins, lacI family EP12_RS16495 PF00817 impB/mucB/samB family EP12_RS16495 PF11798 IMS family HHH motif EP12_RS16495 PF11799 impB/mucB/samB family C-terminal domain EP12_RS16510 PF00175 Oxidoreductase NAD-binding domain EP12_RS16510 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS16510 PF00970 Oxidoreductase FAD-binding domain EP12_RS16515 PF02508 Rnf-Nqr subunit, membrane protein EP12_RS16520 PF02508 Rnf-Nqr subunit, membrane protein EP12_RS16530 PF03116 NQR2, RnfD, RnfE family EP12_RS16535 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EP12_RS16535 PF11973 NQRA C-terminal domain EP12_RS16540 PF07055 Enoyl reductase FAD binding domain EP12_RS16540 PF12241 Trans-2-enoyl-CoA reductase catalytic region EP12_RS16540 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EP12_RS16545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_RS16545 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EP12_RS16550 PF00311 Phosphoenolpyruvate carboxylase EP12_RS16555 PF00141 Peroxidase EP12_RS16565 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EP12_RS16565 PF00056 lactate/malate dehydrogenase, NAD binding domain EP12_RS16570 PF02863 Arginine repressor, C-terminal domain EP12_RS16570 PF01316 Arginine repressor, DNA binding domain EP12_RS16575 PF07715 TonB-dependent Receptor Plug Domain EP12_RS16575 PF00593 TonB dependent receptor EP12_RS16590 PF00593 TonB dependent receptor EP12_RS16605 PF00485 Phosphoribulokinase / Uridine kinase family EP12_RS16610 PF07662 Na+ dependent nucleoside transporter C-terminus EP12_RS16610 PF07670 Nucleoside recognition EP12_RS16610 PF01773 Na+ dependent nucleoside transporter N-terminus EP12_RS16640 PF00474 Sodium:solute symporter family EP12_RS16650 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS16650 PF18415 Histidine kinase receptor ArcB trans-membrane domain EP12_RS16650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS16650 PF01627 Hpt domain EP12_RS16650 PF00989 PAS fold EP12_RS16650 PF00072 Response regulator receiver domain EP12_RS16660 PF18030 RimK PreATP-grasp domain EP12_RS16660 PF08443 RimK-like ATP-grasp domain EP12_RS16670 PF18030 RimK PreATP-grasp domain EP12_RS16670 PF08443 RimK-like ATP-grasp domain EP12_RS16680 PF00072 Response regulator receiver domain EP12_RS16680 PF00196 Bacterial regulatory proteins, luxR family EP12_RS16685 PF16177 Acetyl-coenzyme A synthetase N-terminus EP12_RS16685 PF13193 AMP-binding enzyme C-terminal domain EP12_RS16685 PF00501 AMP-binding enzyme EP12_RS16695 PF02690 Na+/Pi-cotransporter EP12_RS16700 PF00248 Aldo/keto reductase family EP12_RS16715 PF06628 Catalase-related immune-responsive EP12_RS16715 PF00199 Catalase EP12_RS16810 PF00664 ABC transporter transmembrane region EP12_RS16810 PF00005 ABC transporter EP12_RS16810 PF03412 Peptidase C39 family EP12_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS16815 PF03466 LysR substrate binding domain EP12_RS16840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EP12_RS16840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EP12_RS16840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EP12_RS16845 PF00535 Glycosyl transferase family 2 EP12_RS16850 PF16363 GDP-mannose 4,6 dehydratase EP12_RS16855 PF04321 RmlD substrate binding domain EP12_RS16860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EP12_RS16865 PF00483 Nucleotidyl transferase EP12_RS16880 PF00535 Glycosyl transferase family 2 EP12_RS16885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EP12_RS16890 PF00132 Bacterial transferase hexapeptide (six repeats) EP12_RS16895 PF02222 ATP-grasp domain EP12_RS16905 PF00535 Glycosyl transferase family 2 EP12_RS16920 PF00793 DAHP synthetase I family EP12_RS16925 PF03737 Aldolase/RraA EP12_RS16925 PF00180 Isocitrate/isopropylmalate dehydrogenase EP12_RS16955 PF01050 Mannose-6-phosphate isomerase EP12_RS16955 PF00483 Nucleotidyl transferase EP12_RS16970 PF01196 Ribosomal protein L17 EP12_RS16975 PF01000 RNA polymerase Rpb3/RpoA insert domain EP12_RS16975 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EP12_RS16975 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EP12_RS16980 PF01479 S4 domain EP12_RS16980 PF00163 Ribosomal protein S4/S9 N-terminal domain EP12_RS16985 PF00411 Ribosomal protein S11 EP12_RS16990 PF00416 Ribosomal protein S13/S18 EP12_RS16995 PF00344 SecY translocase EP12_RS17000 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EP12_RS17005 PF00327 Ribosomal protein L30p/L7e EP12_RS17010 PF00333 Ribosomal protein S5, N-terminal domain EP12_RS17010 PF03719 Ribosomal protein S5, C-terminal domain EP12_RS17015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EP12_RS17020 PF00347 Ribosomal protein L6 EP12_RS17025 PF00410 Ribosomal protein S8 EP12_RS17030 PF00253 Ribosomal protein S14p/S29e EP12_RS17035 PF00281 Ribosomal protein L5 EP12_RS17035 PF00673 ribosomal L5P family C-terminus EP12_RS17040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EP12_RS17040 PF00467 KOW motif EP12_RS17045 PF00238 Ribosomal protein L14p/L23e EP12_RS17060 PF00588 SpoU rRNA Methylase family EP12_RS17060 PF08032 RNA 2'-O ribose methyltransferase substrate binding EP12_RS17070 PF16655 PhoD-like phosphatase, N-terminal domain EP12_RS17070 PF09423 PhoD-like phosphatase EP12_RS17080 PF08238 Sel1 repeat EP12_RS17090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EP12_RS17095 PF00175 Oxidoreductase NAD-binding domain EP12_RS17095 PF00970 Oxidoreductase FAD-binding domain EP12_RS17105 PF04389 Peptidase family M28 EP12_RS17145 PF01654 Cytochrome bd terminal oxidase subunit I EP12_RS17150 PF02322 Cytochrome bd terminal oxidase subunit II EP12_RS17160 PF00313 'Cold-shock' DNA-binding domain EP12_RS17165 PF03109 ABC1 family EP12_RS17175 PF01209 ubiE/COQ5 methyltransferase family EP12_RS17185 PF01432 Peptidase family M3 EP12_RS17190 PF00072 Response regulator receiver domain EP12_RS17200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS17200 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS17200 PF00497 Bacterial extracellular solute-binding proteins, family 3 EP12_RS17205 PF00072 Response regulator receiver domain EP12_RS17205 PF02954 Bacterial regulatory protein, Fis family EP12_RS17205 PF00158 Sigma-54 interaction domain EP12_RS17210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EP12_RS17210 PF07992 Pyridine nucleotide-disulphide oxidoreductase EP12_RS17215 PF00326 Prolyl oligopeptidase family EP12_RS17215 PF07676 WD40-like Beta Propeller Repeat EP12_RS17230 PF03412 Peptidase C39 family EP12_RS17230 PF00664 ABC transporter transmembrane region EP12_RS17230 PF00005 ABC transporter EP12_RS17235 PF00072 Response regulator receiver domain EP12_RS17235 PF00196 Bacterial regulatory proteins, luxR family EP12_RS17250 PF07724 AAA domain (Cdc48 subfamily) EP12_RS17250 PF00004 ATPase family associated with various cellular activities (AAA) EP12_RS17255 PF00227 Proteasome subunit EP12_RS17260 PF05036 Sporulation related domain EP12_RS17265 PF18074 Primosomal protein N C-terminal domain EP12_RS17265 PF00271 Helicase conserved C-terminal domain EP12_RS17265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EP12_RS17265 PF00270 DEAD/DEAH box helicase EP12_RS17265 PF17764 3′ DNA-binding domain (3′BD) EP12_RS17270 PF01197 Ribosomal protein L31 EP12_RS17280 PF03949 Malic enzyme, NAD binding domain EP12_RS17280 PF00390 Malic enzyme, N-terminal domain EP12_RS17285 PF01340 Met Apo-repressor, MetJ EP12_RS17290 PF02219 Methylenetetrahydrofolate reductase EP12_RS17295 PF03631 Virulence factor BrkB EP12_RS17310 PF00561 alpha/beta hydrolase fold EP12_RS17315 PF02580 D-Tyr-tRNA(Tyr) deacylase EP12_RS17320 PF00583 Acetyltransferase (GNAT) family EP12_RS17320 PF09500 Putative thioesterase (yiiD_Cterm) EP12_RS17325 PF04542 Sigma-70 region 2 EP12_RS17325 PF00140 Sigma-70 factor, region 1.2 EP12_RS17325 PF04545 Sigma-70, region 4 EP12_RS17340 PF18075 FtsX extracellular domain EP12_RS17345 PF00005 ABC transporter EP12_RS17350 PF02881 SRP54-type protein, helical bundle domain EP12_RS17350 PF00448 SRP54-type protein, GTPase domain EP12_RS17360 PF04222 Protein of unknown function (DUF416) EP12_RS17365 PF01914 MarC family integral membrane protein EP12_RS17375 PF12404 Peptidase EP12_RS17375 PF00883 Cytosol aminopeptidase family, catalytic domain EP12_RS17380 PF03749 Sugar fermentation stimulation protein RE domain EP12_RS17380 PF17746 SfsA N-terminal OB domain EP12_RS17385 PF01258 Prokaryotic dksA/traR C4-type zinc finger EP12_RS17390 PF00749 tRNA synthetases class I (E and Q), catalytic domain EP12_RS17395 PF12627 Probable RNA and SrmB- binding site of polymerase A EP12_RS17395 PF12626 Polymerase A arginine-rich C-terminus EP12_RS17395 PF01743 Poly A polymerase head domain EP12_RS17400 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EP12_RS17405 PF02548 Ketopantoate hydroxymethyltransferase EP12_RS17410 PF02569 Pantoate-beta-alanine ligase EP12_RS17415 PF00282 Pyridoxal-dependent decarboxylase conserved domain EP12_RS17430 PF00005 ABC transporter EP12_RS17440 PF00072 Response regulator receiver domain EP12_RS17440 PF00486 Transcriptional regulatory protein, C terminal EP12_RS17445 PF00672 HAMP domain EP12_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS17445 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS17450 PF07715 TonB-dependent Receptor Plug Domain EP12_RS17450 PF00593 TonB dependent receptor EP12_RS17455 PF18331 PKHD-type hydroxylase C-terminal domain EP12_RS17455 PF13640 2OG-Fe(II) oxygenase superfamily EP12_RS17470 PF00571 CBS domain EP12_RS17470 PF01595 Cyclin M transmembrane N-terminal domain EP12_RS17475 PF03773 Predicted permease EP12_RS17480 PF13722 5TM C-terminal transporter carbon starvation CstA EP12_RS17480 PF02554 Carbon starvation protein CstA EP12_RS17490 PF07859 alpha/beta hydrolase fold EP12_RS17495 PF03144 Elongation factor Tu domain 2 EP12_RS17495 PF03143 Elongation factor Tu C-terminal domain EP12_RS17495 PF00009 Elongation factor Tu GTP binding domain EP12_RS17525 PF00177 Ribosomal protein S7p/S5e EP12_RS17530 PF00164 Ribosomal protein S12/S23 EP12_RS17540 PF04561 RNA polymerase Rpb2, domain 2 EP12_RS17540 PF04565 RNA polymerase Rpb2, domain 3 EP12_RS17540 PF04563 RNA polymerase beta subunit EP12_RS17540 PF00562 RNA polymerase Rpb2, domain 6 EP12_RS17540 PF04560 RNA polymerase Rpb2, domain 7 EP12_RS17540 PF10385 RNA polymerase beta subunit external 1 domain EP12_RS17550 PF00466 Ribosomal protein L10 EP12_RS17560 PF00298 Ribosomal protein L11, RNA binding domain EP12_RS17560 PF03946 Ribosomal protein L11, N-terminal domain EP12_RS17575 PF02357 Transcription termination factor nusG EP12_RS17575 PF00467 KOW motif EP12_RS17580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EP12_RS17600 PF00080 Copper/zinc superoxide dismutase (SODC) EP12_RS17605 PF03737 Aldolase/RraA EP12_RS17625 PF01979 Amidohydrolase family EP12_RS17635 PF08212 Lipocalin-like domain EP12_RS17640 PF00248 Aldo/keto reductase family EP12_RS17645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EP12_RS17650 PF07690 Major Facilitator Superfamily EP12_RS17660 PF01227 GTP cyclohydrolase I EP12_RS17670 PF04371 Porphyromonas-type peptidyl-arginine deiminase EP12_RS17675 PF00795 Carbon-nitrogen hydrolase EP12_RS17685 PF17158 Membrane-associated sensor, integral membrane domain EP12_RS17685 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS17695 PF06719 AraC-type transcriptional regulator N-terminus EP12_RS17695 PF12833 Helix-turn-helix domain EP12_RS17745 PF08494 DEAD/H associated EP12_RS17745 PF00271 Helicase conserved C-terminal domain EP12_RS17745 PF00270 DEAD/DEAH box helicase EP12_RS17755 PF04679 ATP dependent DNA ligase C terminal region EP12_RS17755 PF01068 ATP dependent DNA ligase domain EP12_RS17755 PF04675 DNA ligase N terminus EP12_RS17760 PF00294 pfkB family carbohydrate kinase EP12_RS17765 PF00480 ROK family EP12_RS17770 PF00326 Prolyl oligopeptidase family EP12_RS17775 PF02798 Glutathione S-transferase, N-terminal domain EP12_RS17775 PF00043 Glutathione S-transferase, C-terminal domain EP12_RS17795 PF00171 Aldehyde dehydrogenase family EP12_RS17810 PF00762 Ferrochelatase EP12_RS17825 PF12221 Bacterial membrane protein N terminal EP12_RS17825 PF01145 SPFH domain / Band 7 family EP12_RS17830 PF13167 GTP-binding GTPase N-terminal EP12_RS17830 PF16360 GTP-binding GTPase Middle Region EP12_RS17830 PF01926 50S ribosome-binding GTPase EP12_RS17835 PF17209 Hfq protein EP12_RS17855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EP12_RS17865 PF08331 Domain of unknown function (DUF1730) EP12_RS17885 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EP12_RS17890 PF01475 Ferric uptake regulator family EP12_RS17900 PF01894 Uncharacterised protein family UPF0047 EP12_RS17905 PF05736 OprF membrane domain EP12_RS17905 PF00691 OmpA family EP12_RS17940 PF03948 Ribosomal protein L9, C-terminal domain EP12_RS17940 PF01281 Ribosomal protein L9, N-terminal domain EP12_RS17945 PF01084 Ribosomal protein S18 EP12_RS17950 PF01250 Ribosomal protein S6 EP12_RS17955 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS17955 PF18698 Histidine kinase sensor domain EP12_RS17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS17955 PF00672 HAMP domain EP12_RS17955 PF00989 PAS fold EP12_RS17985 PF00356 Bacterial regulatory proteins, lacI family EP12_RS17995 PF00232 Glycosyl hydrolase family 1 EP12_RS18005 PF00722 Glycosyl hydrolases family 16 EP12_RS18015 PF09278 MerR, DNA binding EP12_RS18015 PF00376 MerR family regulatory protein EP12_RS18035 PF00005 ABC transporter EP12_RS18040 PF01032 FecCD transport family EP12_RS18045 PF01497 Periplasmic binding protein EP12_RS18055 PF00593 TonB dependent receptor EP12_RS18055 PF07715 TonB-dependent Receptor Plug Domain EP12_RS18075 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS18080 PF00664 ABC transporter transmembrane region EP12_RS18080 PF00005 ABC transporter EP12_RS18085 PF00005 ABC transporter EP12_RS18085 PF00664 ABC transporter transmembrane region EP12_RS18095 PF02322 Cytochrome bd terminal oxidase subunit II EP12_RS18100 PF01654 Cytochrome bd terminal oxidase subunit I EP12_RS18155 PF00005 ABC transporter EP12_RS18155 PF08402 TOBE domain EP12_RS18205 PF05532 CsbD-like EP12_RS18210 PF00196 Bacterial regulatory proteins, luxR family EP12_RS18220 PF00593 TonB dependent receptor EP12_RS18220 PF07715 TonB-dependent Receptor Plug Domain EP12_RS18225 PF13181 Tetratricopeptide repeat EP12_RS18245 PF07670 Nucleoside recognition EP12_RS18260 PF00202 Aminotransferase class-III EP12_RS18270 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS18275 PF00155 Aminotransferase class I and II EP12_RS18285 PF01546 Peptidase family M20/M25/M40 EP12_RS18285 PF07687 Peptidase dimerisation domain EP12_RS18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS18295 PF03466 LysR substrate binding domain EP12_RS18320 PF08281 Sigma-70, region 4 EP12_RS18320 PF04542 Sigma-70 region 2 EP12_RS18345 PF00472 RF-1 domain EP12_RS18350 PF08386 TAP-like protein EP12_RS18350 PF00561 alpha/beta hydrolase fold EP12_RS18375 PF07715 TonB-dependent Receptor Plug Domain EP12_RS18375 PF00593 TonB dependent receptor EP12_RS18385 PF01048 Phosphorylase superfamily EP12_RS18400 PF00107 Zinc-binding dehydrogenase EP12_RS18400 PF16884 N-terminal domain of oxidoreductase EP12_RS18405 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS18405 PF00072 Response regulator receiver domain EP12_RS18435 PF01063 Amino-transferase class IV EP12_RS18445 PF00474 Sodium:solute symporter family EP12_RS18465 PF00248 Aldo/keto reductase family EP12_RS18470 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EP12_RS18475 PF03601 Conserved hypothetical protein 698 EP12_RS18510 PF00455 DeoR C terminal sensor domain EP12_RS18510 PF08220 DeoR-like helix-turn-helix domain EP12_RS18515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EP12_RS18515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EP12_RS18535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EP12_RS18535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EP12_RS18540 PF12833 Helix-turn-helix domain EP12_RS18565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EP12_RS18570 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EP12_RS18570 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EP12_RS18610 PF01040 UbiA prenyltransferase family EP12_RS18615 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EP12_RS18625 PF00115 Cytochrome C and Quinol oxidase polypeptide I EP12_RS18640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EP12_RS18640 PF00355 Rieske [2Fe-2S] domain EP12_RS18645 PF00111 2Fe-2S iron-sulfur cluster binding domain EP12_RS18645 PF00175 Oxidoreductase NAD-binding domain EP12_RS18670 PF07687 Peptidase dimerisation domain EP12_RS18670 PF01546 Peptidase family M20/M25/M40 EP12_RS18675 PF00857 Isochorismatase family EP12_RS18680 PF00296 Luciferase-like monooxygenase EP12_RS18695 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EP12_RS18705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EP12_RS18725 PF03091 CutA1 divalent ion tolerance protein EP12_RS18735 PF01220 Dehydroquinase class II EP12_RS18740 PF00364 Biotin-requiring enzyme EP12_RS18745 PF02785 Biotin carboxylase C-terminal domain EP12_RS18745 PF00289 Biotin carboxylase, N-terminal domain EP12_RS18745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EP12_RS18775 PF01355 High potential iron-sulfur protein EP12_RS18780 PF01425 Amidase EP12_RS18805 PF02142 MGS-like domain EP12_RS18805 PF01808 AICARFT/IMPCHase bienzyme EP12_RS18815 PF02843 Phosphoribosylglycinamide synthetase, C domain EP12_RS18815 PF02844 Phosphoribosylglycinamide synthetase, N domain EP12_RS18815 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EP12_RS18820 PF00395 S-layer homology domain EP12_RS18820 PF02018 Carbohydrate binding domain EP12_RS18820 PF06452 Carbohydrate family 9 binding domain-like EP12_RS18820 PF00331 Glycosyl hydrolase family 10 EP12_RS18845 PF00072 Response regulator receiver domain EP12_RS18845 PF00486 Transcriptional regulatory protein, C terminal EP12_RS18865 PF01430 Hsp33 protein EP12_RS18870 PF01479 S4 domain EP12_RS18895 PF07963 Prokaryotic N-terminal methylation motif EP12_RS18895 PF08334 Type II secretion system (T2SS), protein G EP12_RS18900 PF12019 Type II transport protein GspH EP12_RS18900 PF07963 Prokaryotic N-terminal methylation motif EP12_RS18910 PF07963 Prokaryotic N-terminal methylation motif EP12_RS18910 PF11612 Type II secretion system (T2SS), protein J EP12_RS18925 PF04612 Type II secretion system (T2SS), protein M EP12_RS18940 PF00171 Aldehyde dehydrogenase family EP12_RS18945 PF01931 Protein of unknown function DUF84 EP12_RS18950 PF13419 Haloacid dehalogenase-like hydrolase EP12_RS18975 PF04349 Periplasmic glucan biosynthesis protein, MdoG EP12_RS18985 PF06794 Uncharacterised protein family (UPF0270) EP12_RS19015 PF04102 SlyX EP12_RS19025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EP12_RS19025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EP12_RS19035 PF03449 Transcription elongation factor, N-terminal EP12_RS19035 PF01272 Transcription elongation factor, GreA/GreB, C-term EP12_RS19060 PF00156 Phosphoribosyl transferase domain EP12_RS19070 PF01106 NifU-like domain EP12_RS19070 PF01521 Iron-sulphur cluster biosynthesis EP12_RS19080 PF01177 Asp/Glu/Hydantoin racemase EP12_RS19085 PF13649 Methyltransferase domain EP12_RS19100 PF01554 MatE EP12_RS19115 PF02630 SCO1/SenC EP12_RS19120 PF01040 UbiA prenyltransferase family EP12_RS19165 PF01726 LexA DNA binding domain EP12_RS19165 PF00717 Peptidase S24-like EP12_RS19170 PF07715 TonB-dependent Receptor Plug Domain EP12_RS19170 PF00593 TonB dependent receptor EP12_RS19185 PF00585 C-terminal regulatory domain of Threonine dehydratase EP12_RS19185 PF00291 Pyridoxal-phosphate dependent enzyme EP12_RS19195 PF03458 UPF0126 domain EP12_RS19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS19205 PF03466 LysR substrate binding domain EP12_RS19215 PF07690 Major Facilitator Superfamily EP12_RS19220 PF07244 Surface antigen variable number repeat EP12_RS19220 PF01103 Surface antigen EP12_RS19220 PF17243 POTRA domain TamA domain 1 EP12_RS19245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EP12_RS19245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EP12_RS19320 PF01206 Sulfurtransferase TusA EP12_RS19325 PF00156 Phosphoribosyl transferase domain EP12_RS19360 PF00589 Phage integrase family EP12_RS19365 PF04002 RadC-like JAB domain EP12_RS19400 PF00580 UvrD/REP helicase N-terminal domain EP12_RS19400 PF13361 UvrD-like helicase C-terminal domain EP12_RS19495 PF00356 Bacterial regulatory proteins, lacI family EP12_RS19505 PF00691 OmpA family EP12_RS19510 PF11871 Domain of unknown function (DUF3391) EP12_RS19510 PF01966 HD domain EP12_RS19525 PF02798 Glutathione S-transferase, N-terminal domain EP12_RS19525 PF00043 Glutathione S-transferase, C-terminal domain EP12_RS19540 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EP12_RS19540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EP12_RS19545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_RS19545 PF02874 ATP synthase alpha/beta family, beta-barrel domain EP12_RS19550 PF00231 ATP synthase EP12_RS19555 PF00306 ATP synthase alpha/beta chain, C terminal domain EP12_RS19555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EP12_RS19555 PF02874 ATP synthase alpha/beta family, beta-barrel domain EP12_RS19560 PF00213 ATP synthase delta (OSCP) subunit EP12_RS19565 PF00430 ATP synthase B/B' CF(0) EP12_RS19570 PF00137 ATP synthase subunit C EP12_RS19575 PF00119 ATP synthase A chain EP12_RS19585 PF02195 ParB-like nuclease domain EP12_RS19585 PF17762 HTH domain found in ParB protein EP12_RS19590 PF13614 AAA domain EP12_RS19595 PF02527 rRNA small subunit methyltransferase G EP12_RS19600 PF13932 GidA associated domain EP12_RS19600 PF01134 Glucose inhibited division protein A EP12_RS19615 PF00258 Flavodoxin EP12_RS19620 PF01926 50S ribosome-binding GTPase EP12_RS19620 PF12631 MnmE helical domain EP12_RS19620 PF10396 GTP-binding protein TrmE N-terminus EP12_RS19625 PF04461 Protein of unknown function (DUF520) EP12_RS19630 PF02096 60Kd inner membrane protein EP12_RS19630 PF14849 YidC periplasmic domain EP12_RS19635 PF00825 Ribonuclease P EP12_RS19670 PF00072 Response regulator receiver domain EP12_RS19710 PF01464 Transglycosylase SLT domain EP12_RS19710 PF14718 Soluble lytic murein transglycosylase L domain EP12_RS19720 PF05593 RHS Repeat EP12_RS19720 PF03527 RHS protein EP12_RS19750 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS19765 PF00990 Diguanylate cyclase, GGDEF domain EP12_RS19780 PF09669 Phage regulatory protein Rha (Phage_pRha) EP12_RS19780 PF10549 ORF11CD3 domain EP12_RS19790 PF12697 Alpha/beta hydrolase family EP12_RS19790 PF08241 Methyltransferase domain EP12_RS19800 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 EP12_RS19800 PF00535 Glycosyl transferase family 2 EP12_RS19810 PF04932 O-Antigen ligase EP12_RS19840 PF12833 Helix-turn-helix domain EP12_RS19840 PF02311 AraC-like ligand binding domain EP12_RS19850 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor EP12_RS19850 PF07963 Prokaryotic N-terminal methylation motif EP12_RS19855 PF03793 PASTA domain EP12_RS19855 PF00069 Protein kinase domain EP12_RS19875 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS19875 PF01627 Hpt domain EP12_RS19875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EP12_RS19875 PF00072 Response regulator receiver domain EP12_RS19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS19875 PF00672 HAMP domain EP12_RS19910 PF00072 Response regulator receiver domain EP12_RS19910 PF01627 Hpt domain EP12_RS19910 PF00512 His Kinase A (phospho-acceptor) domain EP12_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EP12_RS19910 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EP12_RS19910 PF00672 HAMP domain EP12_RS19920 PF04616 Glycosyl hydrolases family 43 EP12_RS19920 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain EP12_RS19935 PF00535 Glycosyl transferase family 2 EP12_RS19965 PF03358 NADPH-dependent FMN reductase EP12_RS19980 PF03466 LysR substrate binding domain EP12_RS19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EP12_RS19995 PF00355 Rieske [2Fe-2S] domain EP12_RS19995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EP12_RS20045 PF04820 Tryptophan halogenase