locus-tag	class	description
ALTBGP9_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ALTBGP9_RS00050	COG2818	Glycosylase
ALTBGP9_RS00060	COG3078	GTPase activator activity
ALTBGP9_RS00080	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ALTBGP9_RS00080	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ALTBGP9_RS00085	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
ALTBGP9_RS00090	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ALTBGP9_RS00095	COG0569	domain protein
ALTBGP9_RS00100	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ALTBGP9_RS00100	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ALTBGP9_RS00120	COG0758	DNA mediated transformation
ALTBGP9_RS00135	COG0009	L-threonylcarbamoyladenylate synthase
ALTBGP9_RS00140	COG0408	coproporphyrinogen oxidase activity
ALTBGP9_RS00145	COG3047	cAMP biosynthetic process
ALTBGP9_RS00160	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ALTBGP9_RS00235	COG2234	aminopeptidase activity
ALTBGP9_RS00245	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ALTBGP9_RS00270	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ALTBGP9_RS00300	COG3642	lipopolysaccharide core region biosynthetic process
ALTBGP9_RS00330	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ALTBGP9_RS00345	COG3161	chorismate lyase activity
ALTBGP9_RS00350	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
ALTBGP9_RS00360	COG0210	DNA helicase
ALTBGP9_RS00395	COG0604	alcohol dehydrogenase
ALTBGP9_RS00395	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ALTBGP9_RS00395	COG3321	synthase
ALTBGP9_RS00395	COG4221	oxidoreductase activity
ALTBGP9_RS00400	COG4221	oxidoreductase activity
ALTBGP9_RS00405	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS00425	COG3321	synthase
ALTBGP9_RS00425	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS00425	COG0604	alcohol dehydrogenase
ALTBGP9_RS00435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ALTBGP9_RS00440	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS00445	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS00490	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS00495	COG3829	transcription factor binding
ALTBGP9_RS00505	COG1454	alcohol dehydrogenase
ALTBGP9_RS00655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS00660	COG0842	Transport permease protein
ALTBGP9_RS00660	COG1129	ABC transporter
ALTBGP9_RS00665	COG0842	Transport permease protein
ALTBGP9_RS00690	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS00700	COG3106	COG3106 Predicted ATPase
ALTBGP9_RS00715	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ALTBGP9_RS00730	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ALTBGP9_RS00735	COG0352	thiamine-phosphate diphosphorylase activity
ALTBGP9_RS00745	COG3071	HemY protein
ALTBGP9_RS00750	COG2959	enzyme of heme biosynthesis
ALTBGP9_RS00760	COG0181	hydroxymethylbilane synthase activity
ALTBGP9_RS00775	COG0194	GDP metabolic process
ALTBGP9_RS00785	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ALTBGP9_RS00795	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ALTBGP9_RS00800	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ALTBGP9_RS00810	COG0678	peroxiredoxin activity
ALTBGP9_RS00825	COG1178	ABC-type Fe3 transport system permease component
ALTBGP9_RS00830	COG3842	ATPase activity
ALTBGP9_RS00835	COG2081	HI0933 family
ALTBGP9_RS00840	COG3047	cAMP biosynthetic process
ALTBGP9_RS00855	COG2200	EAL domain
ALTBGP9_RS00860	COG5001	Diguanylate cyclase
ALTBGP9_RS00890	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS00905	COG0427	acetyl-CoA hydrolase
ALTBGP9_RS00910	COG0123	including yeast histone deacetylase and acetoin utilization protein
ALTBGP9_RS00925	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS00935	COG3064	Membrane
ALTBGP9_RS00945	COG5002	protein histidine kinase activity
ALTBGP9_RS00945	COG5001	Diguanylate cyclase
ALTBGP9_RS00960	COG0514	ATP-dependent DNA helicase (RecQ)
ALTBGP9_RS00965	COG2050	protein possibly involved in aromatic compounds catabolism
ALTBGP9_RS00970	COG2239	Acts as a magnesium transporter
ALTBGP9_RS00975	COG2962	Rard protein
ALTBGP9_RS00980	COG3706	GGDEF domain
ALTBGP9_RS00985	COG0210	DNA helicase
ALTBGP9_RS00995	COG3706	GGDEF domain
ALTBGP9_RS01000	COG1011	Hydrolase
ALTBGP9_RS01005	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ALTBGP9_RS01015	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ALTBGP9_RS01020	COG0019	diaminopimelate decarboxylase activity
ALTBGP9_RS01055	COG0163	prenyltransferase activity
ALTBGP9_RS01060	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ALTBGP9_RS01070	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
ALTBGP9_RS01105	COG1077	Cell shape determining protein MreB Mrl
ALTBGP9_RS01115	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ALTBGP9_RS01120	COG2814	Major facilitator Superfamily
ALTBGP9_RS01125	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ALTBGP9_RS01155	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ALTBGP9_RS01165	COG0629	single-stranded DNA binding
ALTBGP9_RS01185	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ALTBGP9_RS01200	COG1349	DNA-binding transcription factor activity
ALTBGP9_RS01245	COG3409	Peptidoglycan-binding domain 1 protein
ALTBGP9_RS01245	COG3267	Type II secretory pathway component ExeA
ALTBGP9_RS01255	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ALTBGP9_RS01260	COG1459	type II secretion system
ALTBGP9_RS01270	COG2165	general secretion pathway protein
ALTBGP9_RS01275	COG2165	general secretion pathway protein
ALTBGP9_RS01305	COG1077	Cell shape determining protein MreB Mrl
ALTBGP9_RS01310	COG1792	Involved in formation and maintenance of cell shape
ALTBGP9_RS01315	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ALTBGP9_RS01325	COG1530	ribonuclease E activity
ALTBGP9_RS01335	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ALTBGP9_RS01340	COG0312	modulator of DNA gyrase
ALTBGP9_RS01350	COG3028	Belongs to the UPF0307 family
ALTBGP9_RS01355	COG0312	modulator of DNA gyrase
ALTBGP9_RS01370	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS01375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ALTBGP9_RS01375	COG4191	Histidine kinase
ALTBGP9_RS01380	COG0297	glycogen (starch) synthase activity
ALTBGP9_RS01390	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ALTBGP9_RS01445	COG4974	Belongs to the 'phage' integrase family
ALTBGP9_RS01535	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS01540	COG0643	Histidine kinase
ALTBGP9_RS01540	COG2198	Histidine kinase
ALTBGP9_RS01545	COG0835	chemotaxis
ALTBGP9_RS01565	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ALTBGP9_RS01580	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS01585	COG0643	Histidine kinase
ALTBGP9_RS01585	COG2198	Histidine kinase
ALTBGP9_RS01590	COG0835	chemotaxis
ALTBGP9_RS01615	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
ALTBGP9_RS01665	COG0546	phosphoglycolate phosphatase activity
ALTBGP9_RS01675	COG0784	Response regulator, receiver
ALTBGP9_RS01675	COG2205	protein histidine kinase activity
ALTBGP9_RS01690	COG1609	Transcriptional regulator
ALTBGP9_RS01695	COG0673	inositol 2-dehydrogenase activity
ALTBGP9_RS01705	COG2211	Major facilitator Superfamily
ALTBGP9_RS01730	COG1454	alcohol dehydrogenase
ALTBGP9_RS01785	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ALTBGP9_RS01805	COG0089	rRNA binding
ALTBGP9_RS01815	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ALTBGP9_RS01825	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ALTBGP9_RS01840	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ALTBGP9_RS01850	COG1519	Transferase
ALTBGP9_RS01895	COG0788	formyltetrahydrofolate deformylase activity
ALTBGP9_RS01905	COG1643	Atp-dependent helicase
ALTBGP9_RS01915	COG2951	lytic endotransglycosylase activity
ALTBGP9_RS01920	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ALTBGP9_RS01930	COG2354	Protein conserved in bacteria
ALTBGP9_RS01955	COG0004	ammonium transporteR
ALTBGP9_RS01960	COG0405	Gamma-glutamyltransferase
ALTBGP9_RS01965	COG2837	iron assimilation
ALTBGP9_RS01980	COG0540	Belongs to the ATCase OTCase family
ALTBGP9_RS02005	COG0784	Response regulator, receiver
ALTBGP9_RS02005	COG2205	protein histidine kinase activity
ALTBGP9_RS02005	COG5002	protein histidine kinase activity
ALTBGP9_RS02020	COG5001	Diguanylate cyclase
ALTBGP9_RS02020	COG3300	MHYT domain
ALTBGP9_RS02030	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS02040	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ALTBGP9_RS02050	COG0512	Glutamine amidotransferase of anthranilate synthase
ALTBGP9_RS02055	COG0180	Tryptophanyl-tRNA synthetase
ALTBGP9_RS02060	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ALTBGP9_RS02080	COG0338	D12 class N6 adenine-specific DNA methyltransferase
ALTBGP9_RS02090	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ALTBGP9_RS02125	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ALTBGP9_RS02130	COG0281	malic enzyme
ALTBGP9_RS02145	COG0625	glutathione transferase activity
ALTBGP9_RS02155	COG0753	catalase activity
ALTBGP9_RS02180	COG3300	MHYT domain
ALTBGP9_RS02180	COG5001	Diguanylate cyclase
ALTBGP9_RS02185	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ALTBGP9_RS02185	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ALTBGP9_RS02195	COG0137	argininosuccinate synthase activity
ALTBGP9_RS02215	COG1803	Methylglyoxal synthase
ALTBGP9_RS02225	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
ALTBGP9_RS02240	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS02245	COG2205	protein histidine kinase activity
ALTBGP9_RS02250	COG2267	carboxylic ester hydrolase activity
ALTBGP9_RS02255	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ALTBGP9_RS02260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS02265	COG0577	efflux transmembrane transporter activity
ALTBGP9_RS02265	COG1136	(ABC) transporter
ALTBGP9_RS02280	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ALTBGP9_RS02290	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ALTBGP9_RS02295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ALTBGP9_RS02300	COG4942	peptidase
ALTBGP9_RS02305	COG2861	carbohydrate metabolic process
ALTBGP9_RS02315	COG0584	glycerophosphoryl diester phosphodiesterase
ALTBGP9_RS02330	COG1162	GTPase activity
ALTBGP9_RS02335	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
ALTBGP9_RS02365	COG0028	Belongs to the TPP enzyme family
ALTBGP9_RS02385	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ALTBGP9_RS02390	COG0805	protein transport
ALTBGP9_RS02400	COG0084	hydrolase, TatD family'
ALTBGP9_RS02405	COG4251	negative regulation of phosphorylation
ALTBGP9_RS02405	COG3706	GGDEF domain
ALTBGP9_RS02405	COG2203	Gaf domain
ALTBGP9_RS02405	COG5001	Diguanylate cyclase
ALTBGP9_RS02415	COG0248	Ppx GppA phosphatase
ALTBGP9_RS02420	COG0513	Belongs to the DEAD box helicase family
ALTBGP9_RS02425	COG3118	belongs to the thioredoxin family
ALTBGP9_RS02430	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ALTBGP9_RS02435	COG1473	amidohydrolase
ALTBGP9_RS02440	COG2205	protein histidine kinase activity
ALTBGP9_RS02440	COG0784	Response regulator, receiver
ALTBGP9_RS02445	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
ALTBGP9_RS02450	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ALTBGP9_RS02455	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ALTBGP9_RS02470	COG0783	Belongs to the Dps family
ALTBGP9_RS02475	COG2133	pyrroloquinoline quinone binding
ALTBGP9_RS02480	COG0823	Involved in the tonB-independent uptake of proteins
ALTBGP9_RS02480	COG1506	peptidase
ALTBGP9_RS02480	COG4946	Tricorn protease homolog
ALTBGP9_RS02490	COG3118	belongs to the thioredoxin family
ALTBGP9_RS02505	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
ALTBGP9_RS02515	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS02540	COG1757	Na H antiporter
ALTBGP9_RS02555	COG3876	Protein conserved in bacteria
ALTBGP9_RS02560	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ALTBGP9_RS02580	COG0346	lactoylglutathione lyase activity
ALTBGP9_RS02615	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ALTBGP9_RS02625	COG2824	Alkylphosphonate utilization operon protein PhnA
ALTBGP9_RS02630	COG0454	-acetyltransferase
ALTBGP9_RS02640	COG1742	UPF0060 membrane protein
ALTBGP9_RS02710	COG0183	Belongs to the thiolase family
ALTBGP9_RS02715	COG1250	3-hydroxyacyl-CoA dehydrogenase
ALTBGP9_RS02715	COG1024	Enoyl-CoA hydratase
ALTBGP9_RS02720	COG0739	heme binding
ALTBGP9_RS02720	COG0741	lytic transglycosylase activity
ALTBGP9_RS02720	COG1196	nuclear chromosome segregation
ALTBGP9_RS02725	COG0006	proline dipeptidase activity
ALTBGP9_RS02735	COG0142	geranyltranstransferase activity
ALTBGP9_RS02780	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ALTBGP9_RS02785	COG1388	LysM domain
ALTBGP9_RS02785	COG4942	peptidase
ALTBGP9_RS02790	COG1238	metal cluster binding
ALTBGP9_RS02800	COG0585	pseudouridine synthase activity
ALTBGP9_RS02805	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ALTBGP9_RS02815	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ALTBGP9_RS02825	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS02830	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ALTBGP9_RS02830	COG0506	proline dehydrogenase activity
ALTBGP9_RS02830	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ALTBGP9_RS02845	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ALTBGP9_RS02880	COG0494	nUDIX hydrolase
ALTBGP9_RS02885	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
ALTBGP9_RS02890	COG0730	response to heat
ALTBGP9_RS02895	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ALTBGP9_RS02900	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ALTBGP9_RS02910	COG3706	GGDEF domain
ALTBGP9_RS02915	COG2205	protein histidine kinase activity
ALTBGP9_RS02915	COG3437	response regulator, receiver
ALTBGP9_RS02915	COG3850	Histidine kinase
ALTBGP9_RS02915	COG4999	Histidine kinase
ALTBGP9_RS02920	COG2211	Major facilitator Superfamily
ALTBGP9_RS02940	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ALTBGP9_RS02955	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ALTBGP9_RS02960	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ALTBGP9_RS02980	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ALTBGP9_RS02980	COG1648	precorrin-2 dehydrogenase activity
ALTBGP9_RS02985	COG0513	Belongs to the DEAD box helicase family
ALTBGP9_RS03005	COG1538	Outer membrane efflux protein
ALTBGP9_RS03010	COG0494	nUDIX hydrolase
ALTBGP9_RS03020	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ALTBGP9_RS03025	COG3150	esterase
ALTBGP9_RS03040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ALTBGP9_RS03060	COG1509	lysine 2,3-aminomutase activity
ALTBGP9_RS03065	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ALTBGP9_RS03090	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ALTBGP9_RS03110	COG0271	Belongs to the BolA IbaG family
ALTBGP9_RS03125	COG3707	response regulator
ALTBGP9_RS03135	COG0659	secondary active sulfate transmembrane transporter activity
ALTBGP9_RS03140	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ALTBGP9_RS03145	COG2146	nitrite reductase [NAD(P)H] activity
ALTBGP9_RS03150	COG0243	molybdopterin cofactor binding
ALTBGP9_RS03155	COG1648	precorrin-2 dehydrogenase activity
ALTBGP9_RS03155	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ALTBGP9_RS03165	COG0737	Belongs to the 5'-nucleotidase family
ALTBGP9_RS03170	COG3706	GGDEF domain
ALTBGP9_RS03170	COG5001	Diguanylate cyclase
ALTBGP9_RS03170	COG4251	negative regulation of phosphorylation
ALTBGP9_RS03170	COG2203	Gaf domain
ALTBGP9_RS03180	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ALTBGP9_RS03180	COG1116	anion transmembrane transporter activity
ALTBGP9_RS03190	COG1116	anion transmembrane transporter activity
ALTBGP9_RS03205	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ALTBGP9_RS03210	COG4206	TonB-dependent receptor
ALTBGP9_RS03215	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ALTBGP9_RS03220	COG0348	domain, Protein
ALTBGP9_RS03235	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS03240	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS03250	COG4948	Mandelate Racemase Muconate Lactonizing
ALTBGP9_RS03265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS03270	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ALTBGP9_RS03290	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ALTBGP9_RS03295	COG0358	DNA primase activity
ALTBGP9_RS03320	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ALTBGP9_RS03325	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ALTBGP9_RS03340	COG0537	adenosine 5'-monophosphoramidase activity
ALTBGP9_RS03355	COG3135	benzoate transporter
ALTBGP9_RS03365	COG4772	TonB-dependent receptor
ALTBGP9_RS03370	COG1304	FMN binding
ALTBGP9_RS03385	COG0723	plastoquinol--plastocyanin reductase activity
ALTBGP9_RS03395	COG3284	Transcriptional regulator
ALTBGP9_RS03410	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS03460	COG2201	protein-glutamate methylesterase activity
ALTBGP9_RS03500	COG1396	sequence-specific DNA binding
ALTBGP9_RS03505	COG2974	May be involved in recombination
ALTBGP9_RS03510	COG4191	Histidine kinase
ALTBGP9_RS03510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ALTBGP9_RS03515	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS03520	COG5002	protein histidine kinase activity
ALTBGP9_RS03550	COG0811	peptide transport
ALTBGP9_RS03555	COG0811	peptide transport
ALTBGP9_RS03560	COG0848	biopolymer transport protein
ALTBGP9_RS03565	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
ALTBGP9_RS03575	COG3437	response regulator, receiver
ALTBGP9_RS03595	COG2133	pyrroloquinoline quinone binding
ALTBGP9_RS03600	COG1049	propionate catabolic process, 2-methylcitrate cycle
ALTBGP9_RS03635	COG0527	aspartate kinase activity
ALTBGP9_RS03645	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS03650	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ALTBGP9_RS03655	COG2967	ApaG domain
ALTBGP9_RS03665	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ALTBGP9_RS03670	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ALTBGP9_RS03675	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ALTBGP9_RS03680	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ALTBGP9_RS03690	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ALTBGP9_RS03710	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ALTBGP9_RS03725	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ALTBGP9_RS03730	COG3956	TIGRFAM MazG family protein
ALTBGP9_RS03765	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS03775	COG0318	PFAM AMP-dependent synthetase and ligase
ALTBGP9_RS03785	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ALTBGP9_RS03815	COG0642	Histidine kinase
ALTBGP9_RS03835	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ALTBGP9_RS03840	COG0723	plastoquinol--plastocyanin reductase activity
ALTBGP9_RS03845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ALTBGP9_RS03850	COG2857	Cytochrome c1
ALTBGP9_RS03855	COG0625	glutathione transferase activity
ALTBGP9_RS03860	COG2969	positive regulation of protein catabolic process
ALTBGP9_RS03875	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS03880	COG2239	Acts as a magnesium transporter
ALTBGP9_RS03885	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ALTBGP9_RS03905	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ALTBGP9_RS03910	COG1137	ATPase activity
ALTBGP9_RS03915	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ALTBGP9_RS03925	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ALTBGP9_RS03940	COG1127	ABC transporter
ALTBGP9_RS03945	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ALTBGP9_RS03950	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ALTBGP9_RS03955	COG2854	intermembrane phospholipid transfer
ALTBGP9_RS03965	COG5007	Belongs to the BolA IbaG family
ALTBGP9_RS03975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ALTBGP9_RS03980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ALTBGP9_RS03990	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ALTBGP9_RS04020	COG2308	Evidence 4 Homologs of previously reported genes of
ALTBGP9_RS04025	COG1305	Transglutaminase-like
ALTBGP9_RS04060	COG4771	TonB-dependent receptor
ALTBGP9_RS04065	COG0697	spore germination
ALTBGP9_RS04075	COG2205	protein histidine kinase activity
ALTBGP9_RS04075	COG0784	Response regulator, receiver
ALTBGP9_RS04100	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ALTBGP9_RS04110	COG0126	phosphoglycerate kinase activity
ALTBGP9_RS04115	COG3588	fructose-bisphosphate aldolase
ALTBGP9_RS04120	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ALTBGP9_RS04135	COG5002	protein histidine kinase activity
ALTBGP9_RS04155	COG1538	Outer membrane efflux protein
ALTBGP9_RS04165	COG1506	peptidase
ALTBGP9_RS04165	COG4946	Tricorn protease homolog
ALTBGP9_RS04165	COG0823	Involved in the tonB-independent uptake of proteins
ALTBGP9_RS04170	COG0248	Ppx GppA phosphatase
ALTBGP9_RS04175	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ALTBGP9_RS04180	COG2716	regulation of RNA biosynthetic process
ALTBGP9_RS04185	COG0573	inorganic phosphate transmembrane transporter activity
ALTBGP9_RS04195	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ALTBGP9_RS04205	COG0306	phosphate transporter
ALTBGP9_RS04215	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS04240	COG1272	protein, Hemolysin III
ALTBGP9_RS04245	COG1846	Transcriptional regulator
ALTBGP9_RS04250	COG1764	response to oxidative stress
ALTBGP9_RS04265	COG1739	Uncharacterized protein family UPF0029
ALTBGP9_RS04290	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS04295	COG4989	oxidoreductase activity
ALTBGP9_RS04310	COG0420	3'-5' exonuclease activity
ALTBGP9_RS04315	COG0419	ATPase involved in DNA repair
ALTBGP9_RS04325	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ALTBGP9_RS04345	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
ALTBGP9_RS04350	COG2986	histidine ammonia-lyase
ALTBGP9_RS04365	COG2971	BadF BadG BcrA BcrD
ALTBGP9_RS04370	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ALTBGP9_RS04380	COG0488	(ABC) transporter
ALTBGP9_RS04410	COG0668	transmembrane transport
ALTBGP9_RS04425	COG2814	Major facilitator Superfamily
ALTBGP9_RS04430	COG0582	viral genome integration into host DNA
ALTBGP9_RS04455	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ALTBGP9_RS04520	COG1201	RNA secondary structure unwinding
ALTBGP9_RS04570	COG1346	cytolysis
ALTBGP9_RS04600	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ALTBGP9_RS04605	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ALTBGP9_RS04610	COG0513	Belongs to the DEAD box helicase family
ALTBGP9_RS04630	COG3409	Peptidoglycan-binding domain 1 protein
ALTBGP9_RS04630	COG3267	Type II secretory pathway component ExeA
ALTBGP9_RS04655	COG0473	3-isopropylmalate dehydrogenase activity
ALTBGP9_RS04660	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ALTBGP9_RS04675	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ALTBGP9_RS04695	COG2271	Major facilitator Superfamily
ALTBGP9_RS04700	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ALTBGP9_RS04705	COG0800	Aldolase
ALTBGP9_RS04710	COG2186	Transcriptional regulator
ALTBGP9_RS04760	COG4555	ABC transporter
ALTBGP9_RS04765	COG1668	transmembrane transport
ALTBGP9_RS04780	COG4133	protoheme IX ABC transporter activity
ALTBGP9_RS04785	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ALTBGP9_RS04790	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ALTBGP9_RS04795	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ALTBGP9_RS04805	COG1138	Cytochrome C-type biogenesis protein
ALTBGP9_RS04825	COG2853	Lipoprotein
ALTBGP9_RS04830	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ALTBGP9_RS04870	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ALTBGP9_RS04885	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ALTBGP9_RS04890	COG1555	photosystem II stabilization
ALTBGP9_RS04890	COG1596	polysaccharide export
ALTBGP9_RS04895	COG0473	3-isopropylmalate dehydrogenase activity
ALTBGP9_RS04910	COG1611	Belongs to the LOG family
ALTBGP9_RS04960	COG0564	pseudouridine synthase activity
ALTBGP9_RS04975	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
ALTBGP9_RS04980	COG0024	Methionine aminopeptidase
ALTBGP9_RS04985	COG0052	Belongs to the universal ribosomal protein uS2 family
ALTBGP9_RS04995	COG0528	UMP kinase activity
ALTBGP9_RS05005	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ALTBGP9_RS05010	COG0575	Belongs to the CDS family
ALTBGP9_RS05020	COG0750	zinc metalloprotease
ALTBGP9_RS05035	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ALTBGP9_RS05040	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ALTBGP9_RS05055	COG0587	DNA-directed DNA polymerase activity
ALTBGP9_RS05060	COG0825	malonyl-CoA metabolic process
ALTBGP9_RS05065	COG0037	tRNA processing
ALTBGP9_RS05100	COG0047	phosphoribosylformylglycinamidine synthase activity
ALTBGP9_RS05100	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ALTBGP9_RS05110	COG2840	Smr protein MutS2
ALTBGP9_RS05150	COG0835	chemotaxis
ALTBGP9_RS05150	COG0784	Response regulator, receiver
ALTBGP9_RS05155	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ALTBGP9_RS05160	COG1815	bacterial-type flagellum-dependent cell motility
ALTBGP9_RS05175	COG1749	Flagellar hook protein flgE
ALTBGP9_RS05180	COG4787	bacterial-type flagellum-dependent cell motility
ALTBGP9_RS05200	COG1705	Flagellar rod assembly protein muramidase FlgJ
ALTBGP9_RS05200	COG3951	Flagellar rod assembly protein muramidase FlgJ
ALTBGP9_RS05205	COG1256	bacterial-type flagellum assembly
ALTBGP9_RS05230	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ALTBGP9_RS05235	COG1334	flagellar protein FlaG
ALTBGP9_RS05240	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ALTBGP9_RS05285	COG0673	inositol 2-dehydrogenase activity
ALTBGP9_RS05290	COG1083	cytidylyl-transferase
ALTBGP9_RS05305	COG2089	acid synthase
ALTBGP9_RS05310	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS05320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ALTBGP9_RS05335	COG1086	Polysaccharide biosynthesis protein
ALTBGP9_RS05350	COG3475	LICD family
ALTBGP9_RS05355	COG2089	acid synthase
ALTBGP9_RS05365	COG1083	cytidylyl-transferase
ALTBGP9_RS05370	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ALTBGP9_RS05395	COG1677	Flagellar hook-basal body complex protein FliE
ALTBGP9_RS05400	COG1766	The M ring may be actively involved in energy transduction
ALTBGP9_RS05405	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ALTBGP9_RS05455	COG1987	bacterial-type flagellum assembly
ALTBGP9_RS05475	COG2989	Protein conserved in bacteria
ALTBGP9_RS05480	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ALTBGP9_RS05505	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
ALTBGP9_RS05510	COG0643	Histidine kinase
ALTBGP9_RS05510	COG0784	Response regulator, receiver
ALTBGP9_RS05510	COG2198	Histidine kinase
ALTBGP9_RS05515	COG2201	protein-glutamate methylesterase activity
ALTBGP9_RS05520	COG1192	Involved in chromosome partitioning
ALTBGP9_RS05530	COG0835	chemotaxis
ALTBGP9_RS05545	COG1410	methionine synthase
ALTBGP9_RS05545	COG0646	methionine synthase
ALTBGP9_RS05550	COG0646	methionine synthase
ALTBGP9_RS05550	COG1410	methionine synthase
ALTBGP9_RS05560	COG3123	guanosine phosphorylase activity
ALTBGP9_RS05570	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS05575	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS05580	COG0288	reversible hydration of carbon dioxide
ALTBGP9_RS05585	COG0659	secondary active sulfate transmembrane transporter activity
ALTBGP9_RS05595	COG1309	transcriptional regulator
ALTBGP9_RS05600	COG3590	peptidase
ALTBGP9_RS05610	COG2137	regulation of response to DNA damage stimulus
ALTBGP9_RS05615	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ALTBGP9_RS05640	COG1607	acyl-coa hydrolase
ALTBGP9_RS05650	COG0511	ligase activity, forming carbon-carbon bonds
ALTBGP9_RS05650	COG5016	pyruvate
ALTBGP9_RS05655	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ALTBGP9_RS05660	COG4172	Belongs to the ABC transporter superfamily
ALTBGP9_RS05670	COG4171	peptide transport system, permease
ALTBGP9_RS05675	COG4168	peptide transport system, permease
ALTBGP9_RS05680	COG0747	negative chemotaxis
ALTBGP9_RS05685	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ALTBGP9_RS05690	COG1842	Phage shock protein A
ALTBGP9_RS05720	COG0625	glutathione transferase activity
ALTBGP9_RS05725	COG1522	sequence-specific DNA binding
ALTBGP9_RS05790	COG0811	peptide transport
ALTBGP9_RS05795	COG0811	peptide transport
ALTBGP9_RS05800	COG0848	biopolymer transport protein
ALTBGP9_RS05815	COG1444	tRNA N-acetyltransferase activity
ALTBGP9_RS05855	COG0456	acetyltransferase
ALTBGP9_RS05865	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS05870	COG2814	Major facilitator Superfamily
ALTBGP9_RS05875	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ALTBGP9_RS05880	COG0656	L-ascorbic acid biosynthetic process
ALTBGP9_RS05900	COG1846	Transcriptional regulator
ALTBGP9_RS05910	COG3275	phosphorelay sensor kinase activity
ALTBGP9_RS05915	COG1966	Carbon starvation protein
ALTBGP9_RS05935	COG0457	Tetratricopeptide repeat
ALTBGP9_RS05950	COG2197	response regulator
ALTBGP9_RS05960	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ALTBGP9_RS05995	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS06000	COG0702	epimerase
ALTBGP9_RS06020	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS06035	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ALTBGP9_RS06040	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ALTBGP9_RS06045	COG0564	pseudouridine synthase activity
ALTBGP9_RS06055	COG0612	Peptidase, M16
ALTBGP9_RS06060	COG2918	glutathione biosynthetic process
ALTBGP9_RS06085	COG2840	Smr protein MutS2
ALTBGP9_RS06090	COG2890	protein-(glutamine-N5) methyltransferase activity
ALTBGP9_RS06105	COG2719	SpoVR family
ALTBGP9_RS06110	COG2718	Belongs to the UPF0229 family
ALTBGP9_RS06115	COG2766	serine protein kinase
ALTBGP9_RS06120	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ALTBGP9_RS06125	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ALTBGP9_RS06130	COG4771	TonB-dependent receptor
ALTBGP9_RS06155	COG0450	alkyl hydroperoxide reductase
ALTBGP9_RS06160	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ALTBGP9_RS06165	COG2885	chlorophyll binding
ALTBGP9_RS06170	COG0584	glycerophosphoryl diester phosphodiesterase
ALTBGP9_RS06175	COG0346	lactoylglutathione lyase activity
ALTBGP9_RS06180	COG4221	oxidoreductase activity
ALTBGP9_RS06185	COG1278	Cold shock
ALTBGP9_RS06200	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ALTBGP9_RS06205	COG4660	Part of a membrane complex involved in electron transport
ALTBGP9_RS06210	COG4659	FMN binding
ALTBGP9_RS06215	COG4658	electron transport chain
ALTBGP9_RS06220	COG4656	Part of a membrane complex involved in electron transport
ALTBGP9_RS06225	COG2878	Part of a membrane complex involved in electron transport
ALTBGP9_RS06230	COG4657	Part of a membrane complex involved in electron transport
ALTBGP9_RS06245	COG0534	Mate efflux family protein
ALTBGP9_RS06250	COG0556	nucleotide-excision repair
ALTBGP9_RS06265	COG0602	queuosine metabolic process
ALTBGP9_RS06275	COG0367	asparagine synthase
ALTBGP9_RS06295	COG0471	metal ion transport
ALTBGP9_RS06295	COG3273	potassium ion transport
ALTBGP9_RS06310	COG0529	Catalyzes the synthesis of activated sulfate
ALTBGP9_RS06315	COG0175	sulfate reduction
ALTBGP9_RS06320	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ALTBGP9_RS06350	COG2304	oxidoreductase activity
ALTBGP9_RS06370	COG0714	Associated with various cellular activities
ALTBGP9_RS06380	COG1024	Enoyl-CoA hydratase
ALTBGP9_RS06380	COG1250	3-hydroxyacyl-CoA dehydrogenase
ALTBGP9_RS06400	COG1025	Belongs to the peptidase M16 family
ALTBGP9_RS06405	COG2062	phosphohistidine phosphatase, SixA
ALTBGP9_RS06415	COG4536	flavin adenine dinucleotide binding
ALTBGP9_RS06420	COG4137	Cytochrome C assembly protein
ALTBGP9_RS06425	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ALTBGP9_RS06465	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS06470	COG1132	(ABC) transporter
ALTBGP9_RS06485	COG0228	four-way junction DNA binding
ALTBGP9_RS06490	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ALTBGP9_RS06495	COG0336	Belongs to the RNA methyltransferase TrmD family
ALTBGP9_RS06500	COG0335	large ribosomal subunit rRNA binding
ALTBGP9_RS06505	COG2860	membrane
ALTBGP9_RS06515	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ALTBGP9_RS06520	COG0287	Prephenate dehydrogenase
ALTBGP9_RS06520	COG1605	Chorismate mutase
ALTBGP9_RS06550	COG0077	Prephenate dehydratase
ALTBGP9_RS06550	COG1605	Chorismate mutase
ALTBGP9_RS06555	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS06560	COG0023	Translation Initiation Factor
ALTBGP9_RS06590	COG2205	protein histidine kinase activity
ALTBGP9_RS06600	COG2204	response regulator
ALTBGP9_RS06615	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ALTBGP9_RS06620	COG0494	nUDIX hydrolase
ALTBGP9_RS06625	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ALTBGP9_RS06630	COG0632	four-way junction helicase activity
ALTBGP9_RS06635	COG2255	four-way junction helicase activity
ALTBGP9_RS06640	COG0824	Thioesterase
ALTBGP9_RS06645	COG0811	peptide transport
ALTBGP9_RS06660	COG0823	Involved in the tonB-independent uptake of proteins
ALTBGP9_RS06665	COG2885	chlorophyll binding
ALTBGP9_RS06670	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
ALTBGP9_RS06690	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ALTBGP9_RS06725	COG0328	RNA-DNA hybrid ribonuclease activity
ALTBGP9_RS06740	COG4667	esterase of the alpha-beta hydrolase superfamily
ALTBGP9_RS06745	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ALTBGP9_RS06755	COG2205	protein histidine kinase activity
ALTBGP9_RS06755	COG0784	Response regulator, receiver
ALTBGP9_RS06770	COG3038	cytochrome b561
ALTBGP9_RS06790	COG1451	nucleotide metabolic process
ALTBGP9_RS06800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ALTBGP9_RS06810	COG1309	transcriptional regulator
ALTBGP9_RS06815	COG4774	siderophore transport
ALTBGP9_RS06835	COG3706	GGDEF domain
ALTBGP9_RS06845	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ALTBGP9_RS06845	COG3008	intermembrane lipid transfer
ALTBGP9_RS06850	COG2995	paraquat-inducible protein a
ALTBGP9_RS06860	COG0017	Asparaginyl-tRNA synthetase
ALTBGP9_RS06875	COG0189	ligase activity
ALTBGP9_RS06910	COG2226	methyltransferase
ALTBGP9_RS06925	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ALTBGP9_RS06930	COG4139	cobalamin transport
ALTBGP9_RS06935	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
ALTBGP9_RS06940	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
ALTBGP9_RS06945	COG2205	protein histidine kinase activity
ALTBGP9_RS06950	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS06955	COG0569	domain protein
ALTBGP9_RS06960	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ALTBGP9_RS06975	COG5265	(ABC) transporter
ALTBGP9_RS06980	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ALTBGP9_RS06990	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS07010	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ALTBGP9_RS07055	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ALTBGP9_RS07070	COG2755	lipolytic protein G-D-S-L family
ALTBGP9_RS07075	COG4181	ATPase activity
ALTBGP9_RS07080	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ALTBGP9_RS07085	COG1090	epimerase
ALTBGP9_RS07090	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ALTBGP9_RS07095	COG0628	permease
ALTBGP9_RS07120	COG2350	Protein conserved in bacteria
ALTBGP9_RS07125	COG0159	tryptophan synthase activity
ALTBGP9_RS07135	COG0134	indole-3-glycerol-phosphate synthase activity
ALTBGP9_RS07135	COG0135	phosphoribosylanthranilate isomerase activity
ALTBGP9_RS07140	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ALTBGP9_RS07150	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ALTBGP9_RS07155	COG0613	PHP domain protein
ALTBGP9_RS07160	COG0009	L-threonylcarbamoyladenylate synthase
ALTBGP9_RS07170	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ALTBGP9_RS07180	COG0656	L-ascorbic acid biosynthetic process
ALTBGP9_RS07185	COG0110	maltose O-acetyltransferase activity
ALTBGP9_RS07200	COG2733	membrane
ALTBGP9_RS07205	COG0500	methyltransferase
ALTBGP9_RS07210	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ALTBGP9_RS07215	COG0497	DNA recombination
ALTBGP9_RS07220	COG0783	Belongs to the Dps family
ALTBGP9_RS07225	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ALTBGP9_RS07235	COG1454	alcohol dehydrogenase
ALTBGP9_RS07240	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS07250	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ALTBGP9_RS07255	COG2610	gluconate transmembrane transporter activity
ALTBGP9_RS07260	COG4771	TonB-dependent receptor
ALTBGP9_RS07275	COG0784	Response regulator, receiver
ALTBGP9_RS07275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ALTBGP9_RS07275	COG2198	Histidine kinase
ALTBGP9_RS07275	COG2205	protein histidine kinase activity
ALTBGP9_RS07285	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ALTBGP9_RS07295	COG0484	heat shock protein binding
ALTBGP9_RS07300	COG3909	cytochrome
ALTBGP9_RS07315	COG2200	EAL domain
ALTBGP9_RS07315	COG2199	diguanylate cyclase activity
ALTBGP9_RS07315	COG2202	Pas domain
ALTBGP9_RS07330	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ALTBGP9_RS07340	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ALTBGP9_RS07345	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ALTBGP9_RS07370	COG0071	Belongs to the small heat shock protein (HSP20) family
ALTBGP9_RS07380	COG0280	phosphate acetyltransferase
ALTBGP9_RS07380	COG0857	belongs to the CobB CobQ family
ALTBGP9_RS07385	COG1228	amidohydrolase
ALTBGP9_RS07390	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ALTBGP9_RS07395	COG4535	Mg2 and Co2 transporter CorC
ALTBGP9_RS07405	COG1702	phosphate starvation-inducible protein PhoH
ALTBGP9_RS07415	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ALTBGP9_RS07455	COG1607	acyl-coa hydrolase
ALTBGP9_RS07460	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ALTBGP9_RS07470	COG1115	amino acid carrier protein
ALTBGP9_RS07520	COG0012	GTP binding
ALTBGP9_RS07535	COG1064	alcohol dehydrogenase
ALTBGP9_RS07545	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ALTBGP9_RS07555	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ALTBGP9_RS07565	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ALTBGP9_RS07575	COG2890	protein-(glutamine-N5) methyltransferase activity
ALTBGP9_RS07580	COG0784	Response regulator, receiver
ALTBGP9_RS07580	COG3437	response regulator, receiver
ALTBGP9_RS07590	COG2877	3-deoxy-8-phosphooctulonate synthase activity
ALTBGP9_RS07600	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS07610	COG2363	Small membrane protein
ALTBGP9_RS07630	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
ALTBGP9_RS07635	COG0515	serine threonine protein kinase
ALTBGP9_RS07640	COG2116	formate transmembrane transporter activity
ALTBGP9_RS07655	COG0714	Associated with various cellular activities
ALTBGP9_RS07660	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
ALTBGP9_RS07665	COG0033	Phosphoglucomutase
ALTBGP9_RS07670	COG0058	SHG alpha-glucan phosphorylase activity
ALTBGP9_RS07680	COG2988	succinylglutamate desuccinylase activity
ALTBGP9_RS07695	COG1301	dicarboxylic acid transport
ALTBGP9_RS07715	COG1393	Belongs to the ArsC family
ALTBGP9_RS07740	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
ALTBGP9_RS07760	COG3300	MHYT domain
ALTBGP9_RS07760	COG5001	Diguanylate cyclase
ALTBGP9_RS07790	COG2249	NAD(P)H dehydrogenase (quinone) activity
ALTBGP9_RS07815	COG1733	regulation of RNA biosynthetic process
ALTBGP9_RS07825	COG5001	Diguanylate cyclase
ALTBGP9_RS07825	COG3447	MASE1 domain protein
ALTBGP9_RS07825	COG5002	protein histidine kinase activity
ALTBGP9_RS07835	COG0402	S-adenosylhomocysteine deaminase activity
ALTBGP9_RS07840	COG2351	hydroxyisourate hydrolase activity
ALTBGP9_RS07855	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ALTBGP9_RS07865	COG1309	transcriptional regulator
ALTBGP9_RS07880	COG2252	PERMEase
ALTBGP9_RS07885	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ALTBGP9_RS07905	COG2205	protein histidine kinase activity
ALTBGP9_RS07905	COG0784	Response regulator, receiver
ALTBGP9_RS07920	COG2233	PERMEase
ALTBGP9_RS07925	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ALTBGP9_RS07940	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ALTBGP9_RS07945	COG0730	response to heat
ALTBGP9_RS07955	COG0154	amidase activity
ALTBGP9_RS07985	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS07990	COG3001	Fructosamine kinase
ALTBGP9_RS08000	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ALTBGP9_RS08020	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ALTBGP9_RS08030	COG1596	polysaccharide export
ALTBGP9_RS08035	COG0489	protein tyrosine kinase activity
ALTBGP9_RS08040	COG4464	protein tyrosine phosphatase activity
ALTBGP9_RS08075	COG0438	transferase activity, transferring glycosyl groups
ALTBGP9_RS08085	COG1045	serine acetyltransferase
ALTBGP9_RS08100	COG1215	transferase activity, transferring glycosyl groups
ALTBGP9_RS08105	COG1216	Glycosyl transferase, family 2
ALTBGP9_RS08110	COG2244	polysaccharide biosynthetic process
ALTBGP9_RS08150	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ALTBGP9_RS08150	COG0072	phenylalanine-tRNA ligase activity
ALTBGP9_RS08175	COG1472	Belongs to the glycosyl hydrolase 3 family
ALTBGP9_RS08180	COG2096	Adenosyltransferase
ALTBGP9_RS08190	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ALTBGP9_RS08200	COG4591	ABC-type transport system involved in lipoprotein release permease component
ALTBGP9_RS08225	COG0708	Exodeoxyribonuclease III
ALTBGP9_RS08260	COG2814	Major facilitator Superfamily
ALTBGP9_RS08295	COG4770	biotin carboxylase activity
ALTBGP9_RS08300	COG1024	Enoyl-CoA hydratase
ALTBGP9_RS08305	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ALTBGP9_RS08310	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS08315	COG0789	Transcriptional regulator
ALTBGP9_RS08320	COG0183	Belongs to the thiolase family
ALTBGP9_RS08345	COG2925	Exonuclease
ALTBGP9_RS08350	COG2205	protein histidine kinase activity
ALTBGP9_RS08350	COG0784	Response regulator, receiver
ALTBGP9_RS08350	COG5002	protein histidine kinase activity
ALTBGP9_RS08390	COG1643	Atp-dependent helicase
ALTBGP9_RS08410	COG0604	alcohol dehydrogenase
ALTBGP9_RS08410	COG3321	synthase
ALTBGP9_RS08415	COG0328	RNA-DNA hybrid ribonuclease activity
ALTBGP9_RS08420	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ALTBGP9_RS08450	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ALTBGP9_RS08455	COG1136	(ABC) transporter
ALTBGP9_RS08460	COG4591	ABC-type transport system involved in lipoprotein release permease component
ALTBGP9_RS08465	COG1301	dicarboxylic acid transport
ALTBGP9_RS08475	COG3724	N-succinylarginine dihydrolase activity
ALTBGP9_RS08480	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ALTBGP9_RS08485	COG3122	Protein conserved in bacteria
ALTBGP9_RS08495	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS08500	COG0746	molybdenum cofactor guanylyltransferase activity
ALTBGP9_RS08505	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ALTBGP9_RS08510	COG0243	molybdopterin cofactor binding
ALTBGP9_RS08520	COG0625	glutathione transferase activity
ALTBGP9_RS08535	COG2153	protein acetylation
ALTBGP9_RS08550	COG5002	protein histidine kinase activity
ALTBGP9_RS08560	COG1530	ribonuclease E activity
ALTBGP9_RS08565	COG0564	pseudouridine synthase activity
ALTBGP9_RS08570	COG0546	phosphoglycolate phosphatase activity
ALTBGP9_RS08575	COG0424	maF-like protein
ALTBGP9_RS08580	COG1399	metal-binding, possibly nucleic acid-binding protein
ALTBGP9_RS08590	COG0416	fatty acid biosynthetic process
ALTBGP9_RS08595	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ALTBGP9_RS08600	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ALTBGP9_RS08610	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ALTBGP9_RS08615	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ALTBGP9_RS08620	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ALTBGP9_RS08625	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ALTBGP9_RS08640	COG0084	hydrolase, TatD family'
ALTBGP9_RS08645	COG0259	pyridoxamine-phosphate oxidase activity
ALTBGP9_RS08650	COG0702	epimerase
ALTBGP9_RS08655	COG3706	GGDEF domain
ALTBGP9_RS08680	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS08685	COG0596	Alpha beta hydrolase
ALTBGP9_RS08690	COG1024	Enoyl-CoA hydratase
ALTBGP9_RS08690	COG1250	3-hydroxyacyl-CoA dehydrogenase
ALTBGP9_RS08695	COG0183	Belongs to the thiolase family
ALTBGP9_RS08700	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS08705	COG0596	Alpha beta hydrolase
ALTBGP9_RS08720	COG2390	Transcriptional regulator
ALTBGP9_RS08725	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ALTBGP9_RS08735	COG0246	Mannitol dehydrogenase
ALTBGP9_RS08750	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ALTBGP9_RS08755	COG0523	cobalamin synthesis protein
ALTBGP9_RS08760	COG0247	lactate metabolic process
ALTBGP9_RS08760	COG0277	FAD linked oxidase domain protein
ALTBGP9_RS08785	COG0668	transmembrane transport
ALTBGP9_RS08790	COG4771	TonB-dependent receptor
ALTBGP9_RS08815	COG2205	protein histidine kinase activity
ALTBGP9_RS08815	COG2198	Histidine kinase
ALTBGP9_RS08815	COG0784	Response regulator, receiver
ALTBGP9_RS08820	COG3437	response regulator, receiver
ALTBGP9_RS08830	COG0195	Participates in both transcription termination and antitermination
ALTBGP9_RS08845	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ALTBGP9_RS08860	COG5001	Diguanylate cyclase
ALTBGP9_RS08860	COG3300	MHYT domain
ALTBGP9_RS08865	COG1187	pseudouridine synthase activity
ALTBGP9_RS08875	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ALTBGP9_RS08875	COG3153	acetyltransferase
ALTBGP9_RS08955	COG1032	radical SAM domain protein
ALTBGP9_RS08970	COG4771	TonB-dependent receptor
ALTBGP9_RS08975	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ALTBGP9_RS08985	COG4134	Bacterial extracellular solute-binding protein
ALTBGP9_RS08995	COG4136	ATPase activity
ALTBGP9_RS09000	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ALTBGP9_RS09015	COG0604	alcohol dehydrogenase
ALTBGP9_RS09040	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS09065	COG1131	(ABC) transporter
ALTBGP9_RS09085	COG0582	viral genome integration into host DNA
ALTBGP9_RS09100	COG3012	SEC-C Motif Domain Protein
ALTBGP9_RS09120	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS09130	COG2867	negative regulation of translational initiation
ALTBGP9_RS09135	COG2914	Belongs to the UPF0125 (RnfH) family
ALTBGP9_RS09145	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ALTBGP9_RS09150	COG4771	TonB-dependent receptor
ALTBGP9_RS09155	COG0457	Tetratricopeptide repeat
ALTBGP9_RS09175	COG0574	Belongs to the PEP-utilizing enzyme family
ALTBGP9_RS09175	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ALTBGP9_RS09210	COG2850	peptidyl-arginine hydroxylation
ALTBGP9_RS09220	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ALTBGP9_RS09225	COG2915	High frequency lysogenization protein hflD homolog
ALTBGP9_RS09235	COG1187	pseudouridine synthase activity
ALTBGP9_RS09245	COG1278	Cold shock
ALTBGP9_RS09250	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
ALTBGP9_RS09255	COG0542	response to heat
ALTBGP9_RS09260	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ALTBGP9_RS09265	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
ALTBGP9_RS09270	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
ALTBGP9_RS09275	COG0492	ferredoxin-NADP+ reductase activity
ALTBGP9_RS09280	COG3092	negative regulation of chromosome organization
ALTBGP9_RS09285	COG3091	SprT-like family
ALTBGP9_RS09290	COG0616	signal peptide processing
ALTBGP9_RS09305	COG0778	Nitroreductase
ALTBGP9_RS09315	COG0252	asparaginase activity
ALTBGP9_RS09320	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ALTBGP9_RS09325	COG0321	lipoyl(octanoyl) transferase activity
ALTBGP9_RS09330	COG2921	Belongs to the UPF0250 family
ALTBGP9_RS09335	COG1686	Belongs to the peptidase S11 family
ALTBGP9_RS09340	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ALTBGP9_RS09345	COG0772	Belongs to the SEDS family
ALTBGP9_RS09350	COG0768	penicillin binding
ALTBGP9_RS09355	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ALTBGP9_RS09360	COG0799	negative regulation of ribosome biogenesis
ALTBGP9_RS09365	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ALTBGP9_RS09370	COG1466	dna polymerase III delta subunit
ALTBGP9_RS09375	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
ALTBGP9_RS09380	COG0495	leucyl-tRNA aminoacylation
ALTBGP9_RS09390	COG1067	ATP-dependent peptidase activity
ALTBGP9_RS09410	COG1534	Rna-binding protein
ALTBGP9_RS09415	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ALTBGP9_RS09420	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ALTBGP9_RS09425	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ALTBGP9_RS09430	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ALTBGP9_RS09435	COG0149	triose-phosphate isomerase activity
ALTBGP9_RS09440	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ALTBGP9_RS09470	COG1803	Methylglyoxal synthase
ALTBGP9_RS09470	COG1597	lipid kinase activity
ALTBGP9_RS09480	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS09485	COG0561	phosphatase activity
ALTBGP9_RS09500	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ALTBGP9_RS09505	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ALTBGP9_RS09510	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ALTBGP9_RS09525	COG1185	polyribonucleotide nucleotidyltransferase activity
ALTBGP9_RS09560	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ALTBGP9_RS09605	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ALTBGP9_RS09680	COG2223	nitrite transmembrane transporter activity
ALTBGP9_RS09725	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
ALTBGP9_RS09730	COG1196	nuclear chromosome segregation
ALTBGP9_RS09740	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ALTBGP9_RS09755	COG1132	(ABC) transporter
ALTBGP9_RS09760	COG1663	tetraacyldisaccharide 4'-kinase activity
ALTBGP9_RS09795	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ALTBGP9_RS09800	COG0435	Glutathione S-transferase
ALTBGP9_RS09805	COG1741	Belongs to the pirin family
ALTBGP9_RS09825	COG0372	Belongs to the citrate synthase family
ALTBGP9_RS09835	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ALTBGP9_RS09840	COG1053	succinate dehydrogenase
ALTBGP9_RS09845	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ALTBGP9_RS09850	COG0567	Dehydrogenase, E1 component
ALTBGP9_RS09855	COG0508	dehydrogenase complex catalyzes the overall conversion of
ALTBGP9_RS09890	COG4667	esterase of the alpha-beta hydrolase superfamily
ALTBGP9_RS09910	COG0366	Alpha amylase catalytic
ALTBGP9_RS09925	COG1609	Transcriptional regulator
ALTBGP9_RS09935	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS09940	COG2267	carboxylic ester hydrolase activity
ALTBGP9_RS09950	COG0616	signal peptide processing
ALTBGP9_RS09965	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ALTBGP9_RS09970	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ALTBGP9_RS09975	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ALTBGP9_RS09980	COG0386	Belongs to the glutathione peroxidase family
ALTBGP9_RS09985	COG2084	Dehydrogenase
ALTBGP9_RS09995	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS10000	COG1024	Enoyl-CoA hydratase
ALTBGP9_RS10005	COG2226	methyltransferase
ALTBGP9_RS10010	COG3083	sulfuric ester hydrolase activity
ALTBGP9_RS10015	COG3082	Protein of unknown function (DUF1414)
ALTBGP9_RS10020	COG3081	Nucleoid-associated protein
ALTBGP9_RS10030	COG0741	lytic transglycosylase activity
ALTBGP9_RS10030	COG0739	heme binding
ALTBGP9_RS10030	COG1196	nuclear chromosome segregation
ALTBGP9_RS10050	COG3275	phosphorelay sensor kinase activity
ALTBGP9_RS10055	COG3279	Response regulator of the LytR AlgR family
ALTBGP9_RS10060	COG0205	6-phosphofructokinase activity
ALTBGP9_RS10075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ALTBGP9_RS10075	COG2205	protein histidine kinase activity
ALTBGP9_RS10085	COG1054	Belongs to the UPF0176 family
ALTBGP9_RS10125	COG0513	Belongs to the DEAD box helicase family
ALTBGP9_RS10135	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ALTBGP9_RS10140	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS10160	COG1760	l-serine dehydratase
ALTBGP9_RS10180	COG1322	Protein conserved in bacteria
ALTBGP9_RS10200	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ALTBGP9_RS10205	COG0022	dehydrogenase e1 component
ALTBGP9_RS10215	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ALTBGP9_RS10220	COG0515	serine threonine protein kinase
ALTBGP9_RS10225	COG1946	Acyl-CoA thioesterase
ALTBGP9_RS10235	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ALTBGP9_RS10245	COG1956	GAF domain-containing protein
ALTBGP9_RS10260	COG0793	Belongs to the peptidase S41A family
ALTBGP9_RS10265	COG0733	neurotransmitter:sodium symporter activity
ALTBGP9_RS10270	COG1757	Na H antiporter
ALTBGP9_RS10275	COG0308	aminopeptidase N
ALTBGP9_RS10310	COG0167	dihydroorotate dehydrogenase activity
ALTBGP9_RS10325	COG0488	(ABC) transporter
ALTBGP9_RS10335	COG3130	regulation of translation
ALTBGP9_RS10340	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ALTBGP9_RS10350	COG0415	Belongs to the DNA photolyase family
ALTBGP9_RS10355	COG0415	Belongs to the DNA photolyase family
ALTBGP9_RS10360	COG0415	Belongs to the DNA photolyase family
ALTBGP9_RS10365	COG3046	protein related to deoxyribodipyrimidine photolyase
ALTBGP9_RS10380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ALTBGP9_RS10395	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ALTBGP9_RS10400	COG0589	response to stress
ALTBGP9_RS10410	COG0069	glutamate synthase activity
ALTBGP9_RS10425	COG2193	ferroxidase activity
ALTBGP9_RS10435	COG3278	Belongs to the heme-copper respiratory oxidase family
ALTBGP9_RS10450	COG2010	Cytochrome c
ALTBGP9_RS10475	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ALTBGP9_RS10480	COG0589	response to stress
ALTBGP9_RS10485	COG0037	tRNA processing
ALTBGP9_RS10490	COG1752	Esterase of the alpha-beta hydrolase superfamily
ALTBGP9_RS10510	COG1280	lysine exporter protein (LysE YggA)
ALTBGP9_RS10520	COG2897	thiosulfate sulfurtransferase activity
ALTBGP9_RS10525	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ALTBGP9_RS10530	COG3148	PFAM DTW domain containing protein
ALTBGP9_RS10555	COG0322	excinuclease ABC activity
ALTBGP9_RS10560	COG2197	response regulator
ALTBGP9_RS10565	COG1741	Belongs to the pirin family
ALTBGP9_RS10570	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ALTBGP9_RS10575	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ALTBGP9_RS10595	COG3384	dioxygenase
ALTBGP9_RS10600	COG2259	Doxx family
ALTBGP9_RS10605	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS10620	COG0670	Belongs to the BI1 family
ALTBGP9_RS10625	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ALTBGP9_RS10640	COG2920	part of a sulfur-relay system
ALTBGP9_RS10660	COG4206	TonB-dependent receptor
ALTBGP9_RS10660	COG4206	TonB-dependent receptor
ALTBGP9_RS10675	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ALTBGP9_RS10680	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ALTBGP9_RS10685	COG0531	amino acid
ALTBGP9_RS10685	COG1674	ftsk spoiiie
ALTBGP9_RS10695	COG0686	Belongs to the AlaDH PNT family
ALTBGP9_RS10700	COG0284	orotidine-5'-phosphate decarboxylase activity
ALTBGP9_RS10705	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ALTBGP9_RS10720	COG0776	regulation of translation
ALTBGP9_RS10725	COG0539	negative regulation of cytoplasmic translation
ALTBGP9_RS10730	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ALTBGP9_RS10735	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ALTBGP9_RS10740	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ALTBGP9_RS10750	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ALTBGP9_RS10755	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ALTBGP9_RS10760	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ALTBGP9_RS10765	COG0633	Ferredoxin
ALTBGP9_RS10770	COG4221	oxidoreductase activity
ALTBGP9_RS10810	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ALTBGP9_RS10815	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ALTBGP9_RS10830	COG4974	Belongs to the 'phage' integrase family
ALTBGP9_RS10850	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ALTBGP9_RS10910	COG4783	chaperone-mediated protein folding
ALTBGP9_RS10915	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ALTBGP9_RS10920	COG1393	Belongs to the ArsC family
ALTBGP9_RS10955	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ALTBGP9_RS10965	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS10990	COG0572	uridine kinase
ALTBGP9_RS10995	COG3769	mannosylglycerate metabolic process
ALTBGP9_RS11000	COG1215	transferase activity, transferring glycosyl groups
ALTBGP9_RS11015	COG0303	'Molybdopterin
ALTBGP9_RS11020	COG0534	Mate efflux family protein
ALTBGP9_RS11040	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ALTBGP9_RS11095	COG3011	Protein conserved in bacteria
ALTBGP9_RS11135	COG0405	Gamma-glutamyltransferase
ALTBGP9_RS11140	COG1024	Enoyl-CoA hydratase
ALTBGP9_RS11200	COG1671	Belongs to the UPF0178 family
ALTBGP9_RS11205	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS11210	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS11215	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS11220	COG0662	Cupin 2, conserved barrel domain protein
ALTBGP9_RS11220	COG2207	Transcriptional regulator
ALTBGP9_RS11235	COG1505	serine-type exopeptidase activity
ALTBGP9_RS11275	COG0596	Alpha beta hydrolase
ALTBGP9_RS11285	COG0716	FMN binding
ALTBGP9_RS11295	COG0735	belongs to the Fur family
ALTBGP9_RS11305	COG1984	allophanate hydrolase subunit 2
ALTBGP9_RS11310	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ALTBGP9_RS11315	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ALTBGP9_RS11320	COG2996	Protein conserved in bacteria
ALTBGP9_RS11325	COG1765	OsmC-like protein
ALTBGP9_RS11330	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS11340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ALTBGP9_RS11355	COG0436	Aminotransferase
ALTBGP9_RS11360	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
ALTBGP9_RS11365	COG0232	Belongs to the dGTPase family. Type 2 subfamily
ALTBGP9_RS11395	COG0653	protein targeting
ALTBGP9_RS11400	COG0366	Alpha amylase catalytic
ALTBGP9_RS11405	COG0604	alcohol dehydrogenase
ALTBGP9_RS11415	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS11425	COG4771	TonB-dependent receptor
ALTBGP9_RS11450	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
ALTBGP9_RS11470	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ALTBGP9_RS11475	COG0315	cyclic pyranopterin monophosphate synthase activity
ALTBGP9_RS11480	COG0521	Mo-molybdopterin cofactor biosynthetic process
ALTBGP9_RS11485	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ALTBGP9_RS11495	COG2423	ornithine cyclodeaminase activity
ALTBGP9_RS11500	COG0436	Aminotransferase
ALTBGP9_RS11505	COG1522	sequence-specific DNA binding
ALTBGP9_RS11520	COG0826	peptidase U32
ALTBGP9_RS11525	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ALTBGP9_RS11530	COG0436	Aminotransferase
ALTBGP9_RS11535	COG3268	Saccharopine dehydrogenase
ALTBGP9_RS11540	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ALTBGP9_RS11560	COG4771	TonB-dependent receptor
ALTBGP9_RS11605	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ALTBGP9_RS11615	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ALTBGP9_RS11620	COG1074	ATP-dependent DNA helicase activity
ALTBGP9_RS11625	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ALTBGP9_RS11635	COG1022	Amp-dependent synthetase and ligase
ALTBGP9_RS11660	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS11680	COG0640	Transcriptional regulator
ALTBGP9_RS11700	COG2204	response regulator
ALTBGP9_RS11710	COG4251	negative regulation of phosphorylation
ALTBGP9_RS11715	COG0784	Response regulator, receiver
ALTBGP9_RS11720	COG0784	Response regulator, receiver
ALTBGP9_RS11720	COG2205	protein histidine kinase activity
ALTBGP9_RS11775	COG3139	Protein of unknown function (DUF1315)
ALTBGP9_RS11785	COG1115	amino acid carrier protein
ALTBGP9_RS11790	COG2866	Carboxypeptidase
ALTBGP9_RS11810	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ALTBGP9_RS11820	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ALTBGP9_RS11825	COG1640	4-alpha-glucanotransferase
ALTBGP9_RS11835	COG0676	glucose-6-phosphate 1-epimerase activity
ALTBGP9_RS11840	COG0800	Aldolase
ALTBGP9_RS11850	COG0129	dihydroxy-acid dehydratase activity
ALTBGP9_RS11860	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ALTBGP9_RS11865	COG1737	Transcriptional regulator
ALTBGP9_RS11870	COG0469	pyruvate kinase activity
ALTBGP9_RS11895	COG2823	Periplasmic or secreted lipoprotein
ALTBGP9_RS11920	COG3665	Urea carboxylase-associated protein
ALTBGP9_RS11940	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS11945	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ALTBGP9_RS11955	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
ALTBGP9_RS11970	COG2721	sulfolactate sulfo-lyase activity
ALTBGP9_RS11975	COG1904	glucuronate isomerase
ALTBGP9_RS11980	COG0246	Mannitol dehydrogenase
ALTBGP9_RS11985	COG0800	Aldolase
ALTBGP9_RS11990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ALTBGP9_RS11995	COG2755	lipolytic protein G-D-S-L family
ALTBGP9_RS12005	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ALTBGP9_RS12015	COG4677	pectinesterase activity
ALTBGP9_RS12035	COG2356	endonuclease I
ALTBGP9_RS12060	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS12070	COG1979	alcohol dehydrogenase
ALTBGP9_RS12075	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS12080	COG5001	Diguanylate cyclase
ALTBGP9_RS12080	COG4251	negative regulation of phosphorylation
ALTBGP9_RS12080	COG3706	GGDEF domain
ALTBGP9_RS12080	COG2203	Gaf domain
ALTBGP9_RS12090	COG0753	catalase activity
ALTBGP9_RS12095	COG3437	response regulator, receiver
ALTBGP9_RS12095	COG0784	Response regulator, receiver
ALTBGP9_RS12100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ALTBGP9_RS12100	COG4191	Histidine kinase
ALTBGP9_RS12150	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ALTBGP9_RS12180	COG0471	metal ion transport
ALTBGP9_RS12190	COG0489	protein tyrosine kinase activity
ALTBGP9_RS12195	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ALTBGP9_RS12195	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ALTBGP9_RS12200	COG0668	transmembrane transport
ALTBGP9_RS12205	COG2226	methyltransferase
ALTBGP9_RS12210	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ALTBGP9_RS12215	COG0741	lytic transglycosylase activity
ALTBGP9_RS12215	COG1388	LysM domain
ALTBGP9_RS12235	COG3138	arginine N-succinyltransferase
ALTBGP9_RS12240	COG0215	cysteine-tRNA ligase activity
ALTBGP9_RS12245	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ALTBGP9_RS12250	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ALTBGP9_RS12260	COG2268	Band 7 protein
ALTBGP9_RS12265	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS12270	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS12285	COG1733	regulation of RNA biosynthetic process
ALTBGP9_RS12290	COG0604	alcohol dehydrogenase
ALTBGP9_RS12295	COG0861	Integral membrane protein TerC family
ALTBGP9_RS12300	COG1063	alcohol dehydrogenase
ALTBGP9_RS12305	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS12340	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ALTBGP9_RS12345	COG1286	toxin biosynthetic process
ALTBGP9_RS12350	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
ALTBGP9_RS12355	COG0285	dihydrofolate synthase activity
ALTBGP9_RS12380	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ALTBGP9_RS12395	COG0596	Alpha beta hydrolase
ALTBGP9_RS12405	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ALTBGP9_RS12410	COG0318	PFAM AMP-dependent synthetase and ligase
ALTBGP9_RS12420	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ALTBGP9_RS12420	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
ALTBGP9_RS12460	COG0789	Transcriptional regulator
ALTBGP9_RS12470	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS12475	COG1119	ATPase activity
ALTBGP9_RS12485	COG0523	cobalamin synthesis protein
ALTBGP9_RS12490	COG1917	Cupin 2, conserved barrel domain protein
ALTBGP9_RS12490	COG4977	sequence-specific DNA binding
ALTBGP9_RS12495	COG1335	isochorismatase
ALTBGP9_RS12505	COG2031	fatty acid transporter
ALTBGP9_RS12510	COG5002	protein histidine kinase activity
ALTBGP9_RS12510	COG2205	protein histidine kinase activity
ALTBGP9_RS12510	COG0784	Response regulator, receiver
ALTBGP9_RS12515	COG0612	Peptidase, M16
ALTBGP9_RS12530	COG3101	peptidyl-lysine hydroxylation
ALTBGP9_RS12555	COG0446	pyridine nucleotide-disulphide oxidoreductase
ALTBGP9_RS12555	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS12580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ALTBGP9_RS12590	COG4399	Belongs to the UPF0754 family
ALTBGP9_RS12625	COG2186	Transcriptional regulator
ALTBGP9_RS12635	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ALTBGP9_RS12640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ALTBGP9_RS12645	COG2983	Belongs to the UPF0260 family
ALTBGP9_RS12650	COG0179	Fumarylacetoacetate (FAA) hydrolase
ALTBGP9_RS12665	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
ALTBGP9_RS12670	COG0318	PFAM AMP-dependent synthetase and ligase
ALTBGP9_RS12675	COG2267	carboxylic ester hydrolase activity
ALTBGP9_RS12690	COG1214	PFAM Peptidase M22, glycoprotease
ALTBGP9_RS12695	COG1199	ATP-dependent helicase activity
ALTBGP9_RS12780	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ALTBGP9_RS12785	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ALTBGP9_RS12790	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ALTBGP9_RS12795	COG0131	Imidazoleglycerol-phosphate dehydratase
ALTBGP9_RS12795	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ALTBGP9_RS12800	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ALTBGP9_RS12830	COG2116	formate transmembrane transporter activity
ALTBGP9_RS12835	COG0612	Peptidase, M16
ALTBGP9_RS12860	COG0326	Molecular chaperone. Has ATPase activity
ALTBGP9_RS12865	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ALTBGP9_RS12935	COG0582	viral genome integration into host DNA
ALTBGP9_RS12950	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ALTBGP9_RS12955	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ALTBGP9_RS12970	COG3220	belongs to the UPF0276 family
ALTBGP9_RS13020	COG1183	phosphatidylcholine synthase activity
ALTBGP9_RS13040	COG0277	FAD linked oxidase domain protein
ALTBGP9_RS13045	COG1620	l-lactate permease
ALTBGP9_RS13065	COG0542	response to heat
ALTBGP9_RS13090	COG1595	DNA-templated transcription, initiation
ALTBGP9_RS13105	COG4221	oxidoreductase activity
ALTBGP9_RS13120	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ALTBGP9_RS13130	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ALTBGP9_RS13140	COG0142	geranyltranstransferase activity
ALTBGP9_RS13155	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ALTBGP9_RS13160	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ALTBGP9_RS13170	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ALTBGP9_RS13185	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ALTBGP9_RS13185	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ALTBGP9_RS13200	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ALTBGP9_RS13205	COG0488	(ABC) transporter
ALTBGP9_RS13215	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ALTBGP9_RS13225	COG0560	Phosphoserine phosphatase
ALTBGP9_RS13235	COG0084	hydrolase, TatD family'
ALTBGP9_RS13250	COG0571	ribonuclease III activity
ALTBGP9_RS13280	COG1595	DNA-templated transcription, initiation
ALTBGP9_RS13285	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ALTBGP9_RS13300	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ALTBGP9_RS13320	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ALTBGP9_RS13380	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ALTBGP9_RS13385	COG1047	Peptidyl-prolyl cis-trans
ALTBGP9_RS13395	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ALTBGP9_RS13400	COG0196	riboflavin kinase activity
ALTBGP9_RS13405	COG0728	peptidoglycan biosynthetic process
ALTBGP9_RS13410	COG0268	Binds directly to 16S ribosomal RNA
ALTBGP9_RS13425	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS13430	COG0385	Bile acid
ALTBGP9_RS13455	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ALTBGP9_RS13460	COG0776	regulation of translation
ALTBGP9_RS13465	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ALTBGP9_RS13470	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ALTBGP9_RS13475	COG0740	serine-type endopeptidase activity
ALTBGP9_RS13480	COG0544	peptidyl-prolyl cis-trans isomerase activity
ALTBGP9_RS13535	COG1720	tRNA m6t6A37 methyltransferase activity
ALTBGP9_RS13545	COG1234	tRNA 3'-trailer cleavage
ALTBGP9_RS13555	COG0123	including yeast histone deacetylase and acetoin utilization protein
ALTBGP9_RS13570	COG0516	GMP reductase activity
ALTBGP9_RS13570	COG0517	IMP dehydrogenase activity
ALTBGP9_RS13575	COG1570	exodeoxyribonuclease VII activity
ALTBGP9_RS13600	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ALTBGP9_RS13605	COG2976	Protein conserved in bacteria
ALTBGP9_RS13625	COG3063	Type IV pilus biogenesis stability protein PilW
ALTBGP9_RS13630	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ALTBGP9_RS13640	COG2166	iron-sulfur cluster assembly
ALTBGP9_RS13655	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ALTBGP9_RS13660	COG0719	Fe-S assembly protein
ALTBGP9_RS13665	COG0396	ATPase activity
ALTBGP9_RS13670	COG0719	Fe-S assembly protein
ALTBGP9_RS13675	COG1104	cysteine desulfurase activity
ALTBGP9_RS13680	COG1959	2 iron, 2 sulfur cluster binding
ALTBGP9_RS13690	COG2072	flavoprotein involved in K transport
ALTBGP9_RS13695	COG1045	serine acetyltransferase
ALTBGP9_RS13700	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ALTBGP9_RS13705	COG0483	inositol monophosphate 1-phosphatase activity
ALTBGP9_RS13715	COG3279	Response regulator of the LytR AlgR family
ALTBGP9_RS13720	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ALTBGP9_RS13725	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ALTBGP9_RS13730	COG1862	Preprotein translocase
ALTBGP9_RS13735	COG0343	queuine tRNA-ribosyltransferase activity
ALTBGP9_RS13755	COG1842	Phage shock protein A
ALTBGP9_RS13760	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ALTBGP9_RS13780	COG0754	glutathionylspermidine amidase activity
ALTBGP9_RS13810	COG2066	Belongs to the glutaminase family
ALTBGP9_RS13815	COG1785	Belongs to the alkaline phosphatase family
ALTBGP9_RS13820	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS13910	COG0438	transferase activity, transferring glycosyl groups
ALTBGP9_RS13925	COG0367	asparagine synthase
ALTBGP9_RS13930	COG0438	transferase activity, transferring glycosyl groups
ALTBGP9_RS13940	COG0463	Glycosyl transferase, family 2
ALTBGP9_RS13940	COG1216	Glycosyl transferase, family 2
ALTBGP9_RS13965	COG2244	polysaccharide biosynthetic process
ALTBGP9_RS14010	COG0489	protein tyrosine kinase activity
ALTBGP9_RS14020	COG3409	Peptidoglycan-binding domain 1 protein
ALTBGP9_RS14020	COG3267	Type II secretory pathway component ExeA
ALTBGP9_RS14025	COG2827	Endonuclease containing a URI domain
ALTBGP9_RS14045	COG1560	Kdo2-lipid A biosynthetic process
ALTBGP9_RS14060	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS14080	COG1435	thymidine kinase activity
ALTBGP9_RS14095	COG1609	Transcriptional regulator
ALTBGP9_RS14100	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ALTBGP9_RS14120	COG1082	Xylose isomerase domain protein TIM barrel
ALTBGP9_RS14125	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ALTBGP9_RS14130	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ALTBGP9_RS14145	COG1982	Orn Lys Arg decarboxylase major
ALTBGP9_RS14175	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS14195	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
ALTBGP9_RS14200	COG0789	Transcriptional regulator
ALTBGP9_RS14230	COG1960	acyl-CoA dehydrogenase activity
ALTBGP9_RS14290	COG2080	2 iron, 2 sulfur cluster binding
ALTBGP9_RS14295	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ALTBGP9_RS14300	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ALTBGP9_RS14345	COG0601	transmembrane transport
ALTBGP9_RS14350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ALTBGP9_RS14355	COG4172	Belongs to the ABC transporter superfamily
ALTBGP9_RS14360	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS14370	COG0693	protein deglycase activity
ALTBGP9_RS14375	COG1295	ribonuclease BN
ALTBGP9_RS14385	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ALTBGP9_RS14395	COG3279	Response regulator of the LytR AlgR family
ALTBGP9_RS14435	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ALTBGP9_RS14480	COG2814	Major facilitator Superfamily
ALTBGP9_RS14485	COG0339	signal peptide processing
ALTBGP9_RS14525	COG0514	ATP-dependent DNA helicase (RecQ)
ALTBGP9_RS14550	COG4251	negative regulation of phosphorylation
ALTBGP9_RS14555	COG2133	pyrroloquinoline quinone binding
ALTBGP9_RS14595	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ALTBGP9_RS14595	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ALTBGP9_RS14610	COG0738	Major facilitator superfamily
ALTBGP9_RS14615	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ALTBGP9_RS14625	COG2971	BadF BadG BcrA BcrD
ALTBGP9_RS14650	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS14675	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ALTBGP9_RS14680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ALTBGP9_RS14685	COG0006	proline dipeptidase activity
ALTBGP9_RS14700	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ALTBGP9_RS14715	COG2205	protein histidine kinase activity
ALTBGP9_RS14715	COG0784	Response regulator, receiver
ALTBGP9_RS14715	COG2198	Histidine kinase
ALTBGP9_RS14725	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ALTBGP9_RS14730	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ALTBGP9_RS14735	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ALTBGP9_RS14755	COG3313	Fe-S protein
ALTBGP9_RS14780	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ALTBGP9_RS14785	COG0508	dehydrogenase complex catalyzes the overall conversion of
ALTBGP9_RS14790	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ALTBGP9_RS14810	COG3577	Aspartyl protease
ALTBGP9_RS14815	COG0157	Belongs to the NadC ModD family
ALTBGP9_RS14820	COG4969	Belongs to the N-Me-Phe pilin family
ALTBGP9_RS14825	COG1459	type II secretion system
ALTBGP9_RS14830	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ALTBGP9_RS14835	COG0237	dephospho-CoA kinase activity
ALTBGP9_RS14835	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ALTBGP9_RS14840	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
ALTBGP9_RS14845	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
ALTBGP9_RS14850	COG3608	succinylglutamate desuccinylase aspartoacylase
ALTBGP9_RS14855	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS14860	COG4566	intracellular signal transduction
ALTBGP9_RS14875	COG2198	Histidine kinase
ALTBGP9_RS14875	COG0643	Histidine kinase
ALTBGP9_RS14885	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ALTBGP9_RS14895	COG2201	protein-glutamate methylesterase activity
ALTBGP9_RS14900	COG0835	chemotaxis
ALTBGP9_RS14905	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS14910	COG0494	nUDIX hydrolase
ALTBGP9_RS14920	COG0739	heme binding
ALTBGP9_RS14925	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ALTBGP9_RS14930	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ALTBGP9_RS14935	COG0849	cell division
ALTBGP9_RS14940	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ALTBGP9_RS14945	COG1181	Belongs to the D-alanine--D-alanine ligase family
ALTBGP9_RS14960	COG0772	Belongs to the SEDS family
ALTBGP9_RS14965	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ALTBGP9_RS14975	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ALTBGP9_RS14980	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ALTBGP9_RS14985	COG0768	penicillin binding
ALTBGP9_RS14990	COG3116	cell division
ALTBGP9_RS15000	COG2001	Belongs to the MraZ family
ALTBGP9_RS15020	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ALTBGP9_RS15025	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS15045	COG0678	peroxiredoxin activity
ALTBGP9_RS15045	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ALTBGP9_RS15070	COG2204	response regulator
ALTBGP9_RS15095	COG0668	transmembrane transport
ALTBGP9_RS15100	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ALTBGP9_RS15105	COG0189	ligase activity
ALTBGP9_RS15110	COG1678	Uncharacterized ACR, COG1678
ALTBGP9_RS15115	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ALTBGP9_RS15140	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ALTBGP9_RS15145	COG0762	integral membrane protein
ALTBGP9_RS15155	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS15155	COG0446	pyridine nucleotide-disulphide oxidoreductase
ALTBGP9_RS15185	COG1764	response to oxidative stress
ALTBGP9_RS15190	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ALTBGP9_RS15200	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ALTBGP9_RS15205	COG1396	sequence-specific DNA binding
ALTBGP9_RS15210	COG2814	Major facilitator Superfamily
ALTBGP9_RS15215	COG0724	RNA recognition motif
ALTBGP9_RS15240	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ALTBGP9_RS15245	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ALTBGP9_RS15250	COG0083	homoserine kinase activity
ALTBGP9_RS15265	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS15280	COG2197	response regulator
ALTBGP9_RS15285	COG4585	Histidine kinase
ALTBGP9_RS15300	COG0640	Transcriptional regulator
ALTBGP9_RS15310	COG0431	NADPH-dependent FMN reductase
ALTBGP9_RS15315	COG0798	PFAM Bile acid sodium symporter
ALTBGP9_RS15325	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
ALTBGP9_RS15335	COG0642	Histidine kinase
ALTBGP9_RS15355	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ALTBGP9_RS15365	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ALTBGP9_RS15390	COG1748	Saccharopine dehydrogenase
ALTBGP9_RS15410	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ALTBGP9_RS15415	COG3107	peptidoglycan biosynthetic process
ALTBGP9_RS15420	COG0792	nuclease activity
ALTBGP9_RS15435	COG2823	Periplasmic or secreted lipoprotein
ALTBGP9_RS15455	COG4585	Histidine kinase
ALTBGP9_RS15460	COG2197	response regulator
ALTBGP9_RS15475	COG4771	TonB-dependent receptor
ALTBGP9_RS15485	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ALTBGP9_RS15490	COG0372	Belongs to the citrate synthase family
ALTBGP9_RS15495	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ALTBGP9_RS15500	COG2828	Protein conserved in bacteria
ALTBGP9_RS15505	COG2199	diguanylate cyclase activity
ALTBGP9_RS15505	COG2203	Gaf domain
ALTBGP9_RS15525	COG0784	Response regulator, receiver
ALTBGP9_RS15525	COG2198	Histidine kinase
ALTBGP9_RS15525	COG5002	protein histidine kinase activity
ALTBGP9_RS15535	COG0067	glutamate synthase
ALTBGP9_RS15535	COG0069	glutamate synthase activity
ALTBGP9_RS15535	COG0070	glutamate synthase
ALTBGP9_RS15540	COG0493	'glutamate synthase
ALTBGP9_RS15560	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ALTBGP9_RS15565	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
ALTBGP9_RS15570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ALTBGP9_RS15575	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ALTBGP9_RS15590	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ALTBGP9_RS15595	COG5507	3-demethylubiquinone-9 3-methyltransferase
ALTBGP9_RS15615	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ALTBGP9_RS15620	COG1196	nuclear chromosome segregation
ALTBGP9_RS15620	COG0741	lytic transglycosylase activity
ALTBGP9_RS15620	COG0739	heme binding
ALTBGP9_RS15625	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ALTBGP9_RS15635	COG0738	Major facilitator superfamily
ALTBGP9_RS15645	COG1902	pentaerythritol trinitrate reductase activity
ALTBGP9_RS15660	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ALTBGP9_RS15665	COG0625	glutathione transferase activity
ALTBGP9_RS15685	COG2894	cell division
ALTBGP9_RS15690	COG0850	regulation of cytokinetic process
ALTBGP9_RS15725	COG1981	membrane
ALTBGP9_RS15740	COG1914	H( )-stimulated, divalent metal cation uptake system
ALTBGP9_RS15745	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ALTBGP9_RS15750	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS15755	COG1217	gtp-binding protein TYPA
ALTBGP9_RS15760	COG0174	glutamine synthetase
ALTBGP9_RS15770	COG3852	Histidine kinase
ALTBGP9_RS15775	COG2204	response regulator
ALTBGP9_RS15780	COG3437	response regulator, receiver
ALTBGP9_RS15825	COG0525	valine-tRNA ligase activity
ALTBGP9_RS15830	COG2927	DNA polymerase III (CHI subunit)
ALTBGP9_RS15835	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ALTBGP9_RS15840	COG0795	lipopolysaccharide-transporting ATPase activity
ALTBGP9_RS15845	COG0795	lipopolysaccharide-transporting ATPase activity
ALTBGP9_RS15920	COG1733	regulation of RNA biosynthetic process
ALTBGP9_RS15935	COG0625	glutathione transferase activity
ALTBGP9_RS15950	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ALTBGP9_RS15955	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ALTBGP9_RS15960	COG1017	nitric oxide dioxygenase activity
ALTBGP9_RS15960	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ALTBGP9_RS15965	COG3604	Transcriptional regulator
ALTBGP9_RS15995	COG0673	inositol 2-dehydrogenase activity
ALTBGP9_RS16005	COG0628	permease
ALTBGP9_RS16035	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ALTBGP9_RS16045	COG0642	Histidine kinase
ALTBGP9_RS16095	COG1971	Probably functions as a manganese efflux pump
ALTBGP9_RS16120	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
ALTBGP9_RS16125	COG3706	GGDEF domain
ALTBGP9_RS16130	COG0679	Auxin Efflux Carrier
ALTBGP9_RS16135	COG2267	carboxylic ester hydrolase activity
ALTBGP9_RS16165	COG1131	(ABC) transporter
ALTBGP9_RS16175	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ALTBGP9_RS16230	COG2205	protein histidine kinase activity
ALTBGP9_RS16240	COG0348	domain, Protein
ALTBGP9_RS16240	COG3901	Regulator of nitric oxide reductase transcription
ALTBGP9_RS16250	COG2197	response regulator
ALTBGP9_RS16290	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ALTBGP9_RS16295	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS16300	COG1304	FMN binding
ALTBGP9_RS16305	COG0277	FAD linked oxidase domain protein
ALTBGP9_RS16315	COG1462	curli production assembly transport component CsgG
ALTBGP9_RS16345	COG2197	response regulator
ALTBGP9_RS16360	COG0513	Belongs to the DEAD box helicase family
ALTBGP9_RS16365	COG3264	Mechanosensitive ion channel
ALTBGP9_RS16365	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
ALTBGP9_RS16385	COG2202	Pas domain
ALTBGP9_RS16385	COG2200	EAL domain
ALTBGP9_RS16385	COG2199	diguanylate cyclase activity
ALTBGP9_RS16410	COG0730	response to heat
ALTBGP9_RS16415	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ALTBGP9_RS16430	COG4191	Histidine kinase
ALTBGP9_RS16440	COG0417	DNA replication proofreading
ALTBGP9_RS16450	COG0318	PFAM AMP-dependent synthetase and ligase
ALTBGP9_RS16505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ALTBGP9_RS16515	COG1573	uracil-dna glycosylase
ALTBGP9_RS16520	COG3300	MHYT domain
ALTBGP9_RS16520	COG5001	Diguanylate cyclase
ALTBGP9_RS16540	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ALTBGP9_RS16560	COG1983	PspC domain protein
ALTBGP9_RS16565	COG1842	Phage shock protein A
ALTBGP9_RS16575	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ALTBGP9_RS16590	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ALTBGP9_RS16600	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
ALTBGP9_RS16605	COG0204	Acyl-transferase
ALTBGP9_RS16610	COG0204	Acyl-transferase
ALTBGP9_RS16615	COG0668	transmembrane transport
ALTBGP9_RS16630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ALTBGP9_RS16635	COG0733	neurotransmitter:sodium symporter activity
ALTBGP9_RS16650	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ALTBGP9_RS16665	COG0716	FMN binding
ALTBGP9_RS16675	COG0848	biopolymer transport protein
ALTBGP9_RS16685	COG0457	Tetratricopeptide repeat
ALTBGP9_RS16690	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
ALTBGP9_RS16715	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ALTBGP9_RS16720	COG0702	epimerase
ALTBGP9_RS16735	COG5001	Diguanylate cyclase
ALTBGP9_RS16735	COG5002	protein histidine kinase activity
ALTBGP9_RS16745	COG1574	metal-dependent hydrolase with the TIM-barrel fold
ALTBGP9_RS16755	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ALTBGP9_RS16765	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS16770	COG0121	glutamine amidotransferase
ALTBGP9_RS16785	COG4682	membrane
ALTBGP9_RS16805	COG1953	Uracil, thiamine, allantoin
ALTBGP9_RS16810	COG4771	TonB-dependent receptor
ALTBGP9_RS16820	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ALTBGP9_RS16825	COG0778	Nitroreductase
ALTBGP9_RS16830	COG0596	Alpha beta hydrolase
ALTBGP9_RS16835	COG0251	oxidation-reduction process
ALTBGP9_RS16840	COG1335	isochorismatase
ALTBGP9_RS16845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ALTBGP9_RS16850	COG1309	transcriptional regulator
ALTBGP9_RS16865	COG4628	conserved protein (DUF2132)
ALTBGP9_RS16870	COG2610	gluconate transmembrane transporter activity
ALTBGP9_RS16875	COG3265	gluconokinase activity
ALTBGP9_RS16880	COG1609	Transcriptional regulator
ALTBGP9_RS16885	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ALTBGP9_RS16895	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ALTBGP9_RS16915	COG1477	protein flavinylation
ALTBGP9_RS16920	COG2871	sodium ion transport
ALTBGP9_RS16925	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ALTBGP9_RS16930	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ALTBGP9_RS16935	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ALTBGP9_RS16940	COG1805	sodium ion transport
ALTBGP9_RS16945	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
ALTBGP9_RS16950	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ALTBGP9_RS16955	COG0545	Peptidyl-prolyl cis-trans isomerase
ALTBGP9_RS16960	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ALTBGP9_RS16965	COG0039	L-malate dehydrogenase activity
ALTBGP9_RS16970	COG1438	arginine binding
ALTBGP9_RS16995	COG0572	uridine kinase
ALTBGP9_RS17000	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ALTBGP9_RS17015	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
ALTBGP9_RS17040	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ALTBGP9_RS17060	COG0189	ligase activity
ALTBGP9_RS17070	COG0189	ligase activity
ALTBGP9_RS17070	COG4067	protein conserved in archaea
ALTBGP9_RS17085	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ALTBGP9_RS17095	COG1283	sodium-dependent phosphate transmembrane transporter activity
ALTBGP9_RS17100	COG0667	Aldo Keto reductase
ALTBGP9_RS17155	COG0753	catalase activity
ALTBGP9_RS17195	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ALTBGP9_RS17205	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ALTBGP9_RS17255	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS17290	COG0438	transferase activity, transferring glycosyl groups
ALTBGP9_RS17290	COG1216	Glycosyl transferase, family 2
ALTBGP9_RS17310	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ALTBGP9_RS17355	COG1028	Short-chain dehydrogenase reductase Sdr
ALTBGP9_RS17365	COG1083	cytidylyl-transferase
ALTBGP9_RS17405	COG0438	transferase activity, transferring glycosyl groups
ALTBGP9_RS17405	COG0297	glycogen (starch) synthase activity
ALTBGP9_RS17415	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ALTBGP9_RS17420	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ALTBGP9_RS17445	COG0202	RNA polymerase activity
ALTBGP9_RS17470	COG0201	protein transport
ALTBGP9_RS17490	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ALTBGP9_RS17525	COG5002	protein histidine kinase activity
ALTBGP9_RS17525	COG0784	Response regulator, receiver
ALTBGP9_RS17540	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ALTBGP9_RS17545	COG0557	exoribonuclease II activity
ALTBGP9_RS17565	COG4771	TonB-dependent receptor
ALTBGP9_RS17580	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ALTBGP9_RS17600	COG2234	aminopeptidase activity
ALTBGP9_RS17610	COG4251	negative regulation of phosphorylation
ALTBGP9_RS17620	COG1271	oxidase subunit
ALTBGP9_RS17625	COG1294	oxidase, subunit
ALTBGP9_RS17640	COG1522	sequence-specific DNA binding
ALTBGP9_RS17650	COG1278	Cold shock
ALTBGP9_RS17655	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ALTBGP9_RS17665	COG2226	methyltransferase
ALTBGP9_RS17675	COG0339	signal peptide processing
ALTBGP9_RS17680	COG2201	protein-glutamate methylesterase activity
ALTBGP9_RS17700	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ALTBGP9_RS17705	COG0243	molybdopterin cofactor binding
ALTBGP9_RS17720	COG4946	Tricorn protease homolog
ALTBGP9_RS17720	COG1506	peptidase
ALTBGP9_RS17720	COG0823	Involved in the tonB-independent uptake of proteins
ALTBGP9_RS17765	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALTBGP9_RS17775	COG2197	response regulator
ALTBGP9_RS17805	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ALTBGP9_RS17810	COG1278	Cold shock
ALTBGP9_RS17820	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ALTBGP9_RS17825	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ALTBGP9_RS17840	COG0281	malic enzyme
ALTBGP9_RS17850	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ALTBGP9_RS17880	COG0456	acetyltransferase
ALTBGP9_RS17890	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
ALTBGP9_RS17895	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
ALTBGP9_RS17900	COG2177	Part of the ABC transporter FtsEX involved in
ALTBGP9_RS17905	COG2884	Cell division ATP-binding protein ftsE
ALTBGP9_RS17910	COG0552	protein localization to endoplasmic reticulum
ALTBGP9_RS17915	COG0742	ribosomal rna small subunit methyltransferase
ALTBGP9_RS17925	COG2095	MarC family integral membrane protein
ALTBGP9_RS17945	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ALTBGP9_RS17950	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ALTBGP9_RS17955	COG0617	tRNA 3'-terminal CCA addition
ALTBGP9_RS17960	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ALTBGP9_RS17975	COG0076	glutamate decarboxylase activity
ALTBGP9_RS17990	COG0842	Transport permease protein
ALTBGP9_RS17995	COG1131	(ABC) transporter
ALTBGP9_RS18000	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS18005	COG2205	protein histidine kinase activity
ALTBGP9_RS18025	COG1253	flavin adenine dinucleotide binding
ALTBGP9_RS18030	COG0701	Predicted permease
ALTBGP9_RS18035	COG1966	Carbon starvation protein
ALTBGP9_RS18085	COG0848	biopolymer transport protein
ALTBGP9_RS18095	COG0811	peptide transport
ALTBGP9_RS18115	COG3128	pkhd-type hydroxylase
ALTBGP9_RS18140	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ALTBGP9_RS18145	COG0049	tRNA binding
ALTBGP9_RS18150	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ALTBGP9_RS18155	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ALTBGP9_RS18160	COG0085	RNA polymerase activity
ALTBGP9_RS18165	COG0222	ribosome binding
ALTBGP9_RS18170	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ALTBGP9_RS18175	COG0081	regulation of translation
ALTBGP9_RS18180	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ALTBGP9_RS18190	COG0250	Participates in transcription elongation, termination and antitermination
ALTBGP9_RS18195	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ALTBGP9_RS18205	COG1132	(ABC) transporter
ALTBGP9_RS18210	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ALTBGP9_RS18215	COG3590	peptidase
ALTBGP9_RS18230	COG0513	Belongs to the DEAD box helicase family
ALTBGP9_RS18240	COG0418	dihydroorotase activity
ALTBGP9_RS18245	COG3040	lipid binding
ALTBGP9_RS18250	COG4989	oxidoreductase activity
ALTBGP9_RS18255	COG0346	lactoylglutathione lyase activity
ALTBGP9_RS18260	COG0668	transmembrane transport
ALTBGP9_RS18280	COG0302	gtp cyclohydrolase
ALTBGP9_RS18290	COG2957	Belongs to the agmatine deiminase family
ALTBGP9_RS18305	COG1201	RNA secondary structure unwinding
ALTBGP9_RS18310	COG2311	Membrane
ALTBGP9_RS18325	COG1793	dna ligase
ALTBGP9_RS18330	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ALTBGP9_RS18335	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ALTBGP9_RS18360	COG0625	glutathione transferase activity
ALTBGP9_RS18365	COG0625	glutathione transferase activity
ALTBGP9_RS18375	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
ALTBGP9_RS18390	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS18395	COG0028	Belongs to the TPP enzyme family
ALTBGP9_RS18405	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ALTBGP9_RS18410	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
ALTBGP9_RS18415	COG0330	HflC and HflK could
ALTBGP9_RS18420	COG0330	HflC and HflK could
ALTBGP9_RS18425	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ALTBGP9_RS18430	COG1923	regulation of RNA biosynthetic process
ALTBGP9_RS18435	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ALTBGP9_RS18450	COG0802	atpase or kinase
ALTBGP9_RS18455	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ALTBGP9_RS18455	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ALTBGP9_RS18460	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ALTBGP9_RS18480	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
ALTBGP9_RS18485	COG0735	belongs to the Fur family
ALTBGP9_RS18505	COG0305	Participates in initiation and elongation during chromosome replication
ALTBGP9_RS18530	COG2258	MOSC domain
ALTBGP9_RS18600	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS18605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ALTBGP9_RS18605	COG4191	Histidine kinase
ALTBGP9_RS18610	COG0840	transmembrane signaling receptor activity
ALTBGP9_RS18625	COG2855	membrane
ALTBGP9_RS18630	COG2175	clavaminate synthase activity
ALTBGP9_RS18635	COG0656	L-ascorbic acid biosynthetic process
ALTBGP9_RS18655	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ALTBGP9_RS18660	COG4771	TonB-dependent receptor
ALTBGP9_RS18680	COG3706	GGDEF domain
ALTBGP9_RS18685	COG1757	Na H antiporter
ALTBGP9_RS18690	COG1472	Belongs to the glycosyl hydrolase 3 family
ALTBGP9_RS18700	COG2723	6-phospho-beta-galactosidase activity
ALTBGP9_RS18705	COG1609	Transcriptional regulator
ALTBGP9_RS18710	COG0477	Major facilitator Superfamily
ALTBGP9_RS18710	COG2814	Major facilitator Superfamily
ALTBGP9_RS18715	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ALTBGP9_RS18720	COG4988	ABC transporter
ALTBGP9_RS18725	COG4890	Cyd operon protein YbgT
ALTBGP9_RS18730	COG1294	oxidase, subunit
ALTBGP9_RS18770	COG4319	ketosteroid isomerase
ALTBGP9_RS18775	COG1335	isochorismatase
ALTBGP9_RS18780	COG2863	cytochrome
ALTBGP9_RS18800	COG1741	Belongs to the pirin family
ALTBGP9_RS18815	COG4771	TonB-dependent receptor
ALTBGP9_RS18830	COG1469	GTP cyclohydrolase I activity
ALTBGP9_RS18885	COG3237	CsbD-like
ALTBGP9_RS18900	COG1595	DNA-templated transcription, initiation
ALTBGP9_RS18930	COG0508	dehydrogenase complex catalyzes the overall conversion of
ALTBGP9_RS18930	COG0596	Alpha beta hydrolase
ALTBGP9_RS18955	COG3038	cytochrome b561
ALTBGP9_RS18965	COG1252	NADH dehydrogenase
ALTBGP9_RS18970	COG4206	TonB-dependent receptor
ALTBGP9_RS18985	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS18990	COG2067	long-chain fatty acid transport protein
ALTBGP9_RS18995	COG2130	NADP-dependent
ALTBGP9_RS19000	COG2203	Gaf domain
ALTBGP9_RS19000	COG3706	GGDEF domain
ALTBGP9_RS19000	COG4251	negative regulation of phosphorylation
ALTBGP9_RS19000	COG5001	Diguanylate cyclase
ALTBGP9_RS19005	COG0784	Response regulator, receiver
ALTBGP9_RS19005	COG2205	protein histidine kinase activity
ALTBGP9_RS19015	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ALTBGP9_RS19020	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ALTBGP9_RS19025	COG1349	DNA-binding transcription factor activity
ALTBGP9_RS19030	COG0673	inositol 2-dehydrogenase activity
ALTBGP9_RS19045	COG0697	spore germination
ALTBGP9_RS19050	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ALTBGP9_RS19055	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ALTBGP9_RS19060	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ALTBGP9_RS19065	COG1166	arginine decarboxylase activity
ALTBGP9_RS19075	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ALTBGP9_RS19155	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ALTBGP9_RS19165	COG0109	protoheme IX farnesyltransferase activity
ALTBGP9_RS19185	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ALTBGP9_RS19230	COG1324	tolerance protein
ALTBGP9_RS19235	COG4232	protein-disulfide reductase activity
ALTBGP9_RS19240	COG0739	heme binding
ALTBGP9_RS19245	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ALTBGP9_RS19250	COG0511	ligase activity, forming carbon-carbon bonds
ALTBGP9_RS19255	COG0439	Biotin carboxylase
ALTBGP9_RS19300	COG0154	amidase activity
ALTBGP9_RS19315	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ALTBGP9_RS19320	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
ALTBGP9_RS19335	COG0151	Belongs to the GarS family
ALTBGP9_RS19350	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ALTBGP9_RS19355	COG3954	Phosphoribulokinase
ALTBGP9_RS19380	COG1501	Belongs to the glycosyl hydrolase 31 family
ALTBGP9_RS19385	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ALTBGP9_RS19390	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ALTBGP9_RS19400	COG3031	protein transport across the cell outer membrane
ALTBGP9_RS19410	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ALTBGP9_RS19415	COG1459	type II secretion system
ALTBGP9_RS19420	COG2165	general secretion pathway protein
ALTBGP9_RS19425	COG2165	general secretion pathway protein
ALTBGP9_RS19430	COG2165	general secretion pathway protein
ALTBGP9_RS19435	COG4795	General secretion pathway protein
ALTBGP9_RS19450	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
ALTBGP9_RS19470	COG1012	belongs to the aldehyde dehydrogenase family
ALTBGP9_RS19480	COG1011	Hydrolase
ALTBGP9_RS19485	COG0494	nUDIX hydrolase
ALTBGP9_RS19490	COG1218	3'(2'),5'-bisphosphate nucleotidase
ALTBGP9_RS19500	COG2943	transferase activity, transferring hexosyl groups
ALTBGP9_RS19505	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
ALTBGP9_RS19515	COG3089	Belongs to the UPF0270 family
ALTBGP9_RS19520	COG0429	hydrolase of the alpha beta-hydrolase fold
ALTBGP9_RS19530	COG0488	(ABC) transporter
ALTBGP9_RS19560	COG0545	Peptidyl-prolyl cis-trans isomerase
ALTBGP9_RS19570	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ALTBGP9_RS19575	COG2183	response to ionizing radiation
ALTBGP9_RS19600	COG2207	Transcriptional regulator
ALTBGP9_RS19600	COG1609	Transcriptional regulator
ALTBGP9_RS19605	COG2211	Major facilitator Superfamily
ALTBGP9_RS19630	COG3693	PFAM glycoside hydrolase, family 10
ALTBGP9_RS19635	COG0667	Aldo Keto reductase
ALTBGP9_RS19640	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ALTBGP9_RS19645	COG2115	Belongs to the xylose isomerase family
ALTBGP9_RS19650	COG1070	Carbohydrate kinase
ALTBGP9_RS19665	COG1472	Belongs to the glycosyl hydrolase 3 family
ALTBGP9_RS19670	COG0477	Major facilitator Superfamily
ALTBGP9_RS19710	COG0596	Alpha beta hydrolase
ALTBGP9_RS19715	COG1040	competence protein
ALTBGP9_RS19735	COG1794	racemase activity, acting on amino acids and derivatives
ALTBGP9_RS19750	COG0534	Mate efflux family protein
ALTBGP9_RS19765	COG1999	signal sequence binding
ALTBGP9_RS19770	COG0109	protoheme IX farnesyltransferase activity
ALTBGP9_RS19775	COG1612	heme a metabolic process
ALTBGP9_RS19800	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
ALTBGP9_RS19805	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ALTBGP9_RS19810	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ALTBGP9_RS19825	COG3706	GGDEF domain
ALTBGP9_RS19840	COG0129	dihydroxy-acid dehydratase activity
ALTBGP9_RS19845	COG2860	membrane
ALTBGP9_RS19850	COG0606	chelatase, subunit chli
ALTBGP9_RS19855	COG0583	DNA-binding transcription factor activity
ALTBGP9_RS19865	COG2814	Major facilitator Superfamily
ALTBGP9_RS19875	COG0729	surface antigen
ALTBGP9_RS19880	COG2911	Protein conserved in bacteria
ALTBGP9_RS19905	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ALTBGP9_RS19915	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ALTBGP9_RS19935	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
ALTBGP9_RS19960	COG1228	amidohydrolase
ALTBGP9_RS19980	COG0425	Belongs to the sulfur carrier protein TusA family
ALTBGP9_RS19995	COG1561	YicC-like family, N-terminal region
ALTBGP9_RS20020	COG2211	Major facilitator Superfamily
ALTBGP9_RS20025	COG1609	Transcriptional regulator
ALTBGP9_RS20045	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
ALTBGP9_RS20045	COG2199	diguanylate cyclase activity
ALTBGP9_RS20070	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ALTBGP9_RS20090	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ALTBGP9_RS20095	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ALTBGP9_RS20115	COG1475	DNA binding
ALTBGP9_RS20120	COG1192	Involved in chromosome partitioning
ALTBGP9_RS20145	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ALTBGP9_RS20150	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ALTBGP9_RS20160	COG0706	membrane insertase activity
ALTBGP9_RS20165	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ALTBGP9_RS20170	COG0594	ribonuclease P activity
ALTBGP9_RS20175	COG0230	Belongs to the bacterial ribosomal protein bL34 family
ALTBGP9_RS20185	COG1192	Involved in chromosome partitioning
ALTBGP9_RS20230	COG5002	protein histidine kinase activity
ALTBGP9_RS20235	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS20255	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ALTBGP9_RS20335	COG1017	nitric oxide dioxygenase activity
ALTBGP9_RS20335	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ALTBGP9_RS20355	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ALTBGP9_RS20385	COG0375	protein maturation
ALTBGP9_RS20395	COG0409	Hydrogenase expression formation protein
ALTBGP9_RS20405	COG0309	Hydrogenase expression formation protein (HypE)
ALTBGP9_RS20410	COG0789	Transcriptional regulator
ALTBGP9_RS20415	COG2217	Heavy metal translocating P-type atpase
ALTBGP9_RS20505	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ALTBGP9_RS20515	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ALTBGP9_RS20525	COG0463	Glycosyl transferase, family 2
ALTBGP9_RS20530	COG0745	RESPONSE REGULATOR receiver
ALTBGP9_RS20535	COG5002	protein histidine kinase activity
ALTBGP9_RS20570	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ALTBGP9_RS20575	COG0789	Transcriptional regulator
ALTBGP9_RS20580	COG2217	Heavy metal translocating P-type atpase
ALTBGP9_RS20620	COG0531	amino acid
ALTBGP9_RS20650	COG3209	COG3209 Rhs family protein
ALTBGP9_RS20660	COG0789	Transcriptional regulator
ALTBGP9_RS20780	COG1917	Cupin 2, conserved barrel domain protein
ALTBGP9_RS20780	COG2207	Transcriptional regulator
ALTBGP9_RS20785	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ALTBGP9_RS20790	COG1280	lysine exporter protein (LysE YggA)
ALTBGP9_RS20795	COG1522	sequence-specific DNA binding
ALTBGP9_RS20845	COG1396	sequence-specific DNA binding
ALTBGP9_RS20850	COG3550	peptidyl-serine autophosphorylation