AMBLS11_RS00005 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AMBLS11_RS00010 SM00480 DNA polymerase III beta subunit AMBLS11_RS00020 SM00387 Histidine kinase-like ATPases AMBLS11_RS00020 SM00433 TopoisomeraseII AMBLS11_RS00030 SM00836 DALR anticodon binding domain AMBLS11_RS00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMBLS11_RS00070 SM00474 3'-5' exonuclease AMBLS11_RS00070 SM00475 5'-3' exonuclease AMBLS11_RS00070 SM00482 DNA polymerase A domain AMBLS11_RS00115 SM00257 Lysin motif AMBLS11_RS00195 SM00481 DNA polymerase alpha chain like domain AMBLS11_RS00280 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBLS11_RS00280 SM01232 AMBLS11_RS00280 AMBLS11_RS00305 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS00305 SM00267 diguanylate cyclase AMBLS11_RS00315 SM00829 Enoylreductase AMBLS11_RS00320 SM00450 Rhodanese Homology Domain AMBLS11_RS00355 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS00355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS00355 SM00267 diguanylate cyclase AMBLS11_RS00420 SM00490 helicase superfamily c-terminal domain AMBLS11_RS00425 SM00487 DEAD-like helicases superfamily AMBLS11_RS00440 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS00470 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS00490 SM00876 Biotin and Thiamin Synthesis associated domain AMBLS11_RS00540 SM00267 diguanylate cyclase AMBLS11_RS00550 SM00072 Guanylate kinase homologues. AMBLS11_RS00555 SM01409 AMBLS11_RS00555 AMBLS11_RS00560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS00560 SM00954 Region found in RelA / SpoT proteins AMBLS11_RS00575 SM00487 DEAD-like helicases superfamily AMBLS11_RS00575 SM00490 helicase superfamily c-terminal domain AMBLS11_RS00605 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS00610 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS00610 SM00267 diguanylate cyclase AMBLS11_RS00645 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS00645 SM01034 Sensors of blue-light using FAD AMBLS11_RS00650 SM00267 diguanylate cyclase AMBLS11_RS00715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS00735 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS00735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS00735 SM00267 diguanylate cyclase AMBLS11_RS00750 SM00341 Helicase and RNase D C-terminal AMBLS11_RS00750 SM00487 DEAD-like helicases superfamily AMBLS11_RS00750 SM00490 helicase superfamily c-terminal domain AMBLS11_RS00750 SM00956 AMBLS11_RS00750 AMBLS11_RS00760 SM00924 MgtE intracellular N domain AMBLS11_RS00770 SM00267 diguanylate cyclase AMBLS11_RS00770 SM00448 cheY-homologous receiver domain AMBLS11_RS00780 SM00971 Serine acetyltransferase, N-terminal AMBLS11_RS00785 SM00267 diguanylate cyclase AMBLS11_RS00825 SM00014 Acid phosphatase homologues AMBLS11_RS00865 SM01130 AMBLS11_RS00865 AMBLS11_RS00870 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_RS00880 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS00925 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS00985 SM00420 helix_turn_helix, Deoxyribose operon repressor AMBLS11_RS00985 SM01134 AMBLS11_RS00985 AMBLS11_RS01030 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS01065 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS01070 SM01038 Beta galactosidase small chain AMBLS11_RS01075 SM00448 cheY-homologous receiver domain AMBLS11_RS01075 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS01080 SM00387 Histidine kinase-like ATPases AMBLS11_RS01105 SM00478 endonuclease III AMBLS11_RS01105 SM00525 AMBLS11_RS01105 AMBLS11_RS01140 SM00857 Resolvase, N terminal domain AMBLS11_RS01220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS01220 SM00387 Histidine kinase-like ATPases AMBLS11_RS01220 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS01225 SM00448 cheY-homologous receiver domain AMBLS11_RS01225 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS01365 SM00422 helix_turn_helix, mercury resistance AMBLS11_RS01495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS01500 SM00448 cheY-homologous receiver domain AMBLS11_RS01505 SM00073 Histidine Phosphotransfer domain AMBLS11_RS01505 SM00260 Two component signalling adaptor domain AMBLS11_RS01505 SM00387 Histidine kinase-like ATPases AMBLS11_RS01505 SM01231 AMBLS11_RS01505 AMBLS11_RS01510 SM00260 Two component signalling adaptor domain AMBLS11_RS01515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS01515 SM00091 PAS domain AMBLS11_RS01515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS01520 SM00138 Methyltransferase, chemotaxis proteins AMBLS11_RS01530 SM00448 cheY-homologous receiver domain AMBLS11_RS01535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS01540 SM00448 cheY-homologous receiver domain AMBLS11_RS01545 SM00073 Histidine Phosphotransfer domain AMBLS11_RS01545 SM00260 Two component signalling adaptor domain AMBLS11_RS01545 SM00387 Histidine kinase-like ATPases AMBLS11_RS01545 SM01231 AMBLS11_RS01545 AMBLS11_RS01550 SM00260 Two component signalling adaptor domain AMBLS11_RS01555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS01555 SM00091 PAS domain AMBLS11_RS01555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS01555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS01560 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS01560 SM00091 PAS domain AMBLS11_RS01560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS01565 SM00138 Methyltransferase, chemotaxis proteins AMBLS11_RS01575 SM00448 cheY-homologous receiver domain AMBLS11_RS01595 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS01610 SM00267 diguanylate cyclase AMBLS11_RS01625 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS01625 SM00387 Histidine kinase-like ATPases AMBLS11_RS01625 SM00448 cheY-homologous receiver domain AMBLS11_RS01640 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS01720 SM00855 Phosphoglycerate mutase family AMBLS11_RS01735 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS01740 SM01403 AMBLS11_RS01740 AMBLS11_RS01760 SM01382 AMBLS11_RS01760 AMBLS11_RS01760 SM01383 AMBLS11_RS01760 AMBLS11_RS01775 SM00322 K homology RNA-binding domain AMBLS11_RS01820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS01820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS01850 SM00487 DEAD-like helicases superfamily AMBLS11_RS01850 SM00490 helicase superfamily c-terminal domain AMBLS11_RS01880 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS01890 SM00938 Nitrogen regulatory protein P-II AMBLS11_RS01940 SM00073 Histidine Phosphotransfer domain AMBLS11_RS01940 SM00387 Histidine kinase-like ATPases AMBLS11_RS01940 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS01940 SM00448 cheY-homologous receiver domain AMBLS11_RS01945 SM00434 DNA Topoisomerase IV AMBLS11_RS01955 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS01955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS01955 SM00267 diguanylate cyclase AMBLS11_RS01960 SM01150 AMBLS11_RS01960 AMBLS11_RS02035 SM00965 Secretin and TonB N terminus short domain AMBLS11_RS02065 SM00919 Malic enzyme, NAD binding domain AMBLS11_RS02065 SM01274 AMBLS11_RS02065 AMBLS11_RS02085 SM01060 AMBLS11_RS02085 AMBLS11_RS02100 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS02130 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_RS02135 SM00851 MGS-like domain AMBLS11_RS02145 SM00448 cheY-homologous receiver domain AMBLS11_RS02145 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS02150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS02150 SM00387 Histidine kinase-like ATPases AMBLS11_RS02150 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS02170 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS02195 SM00450 Rhodanese Homology Domain AMBLS11_RS02235 SM00479 AMBLS11_RS02235 AMBLS11_RS02270 SM00028 Tetratricopeptide repeats AMBLS11_RS02325 SM00267 diguanylate cyclase AMBLS11_RS02330 SM01004 Delta-aminolevulinic acid dehydratase AMBLS11_RS02340 SM00487 DEAD-like helicases superfamily AMBLS11_RS02340 SM00490 helicase superfamily c-terminal domain AMBLS11_RS02350 SM00357 Cold shock protein domain AMBLS11_RS02350 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS02350 SM00959 Rho termination factor, N-terminal domain AMBLS11_RS02360 SM00387 Histidine kinase-like ATPases AMBLS11_RS02360 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS02360 SM00448 cheY-homologous receiver domain AMBLS11_RS02370 SM01001 AIR carboxylase AMBLS11_RS02430 SM00788 Adenylosuccinate synthetase AMBLS11_RS02485 SM01005 Alanine racemase, C-terminal domain AMBLS11_RS02510 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS02665 SM00257 Lysin motif AMBLS11_RS02705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS02705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS02705 SM01049 AMBLS11_RS02705 AMBLS11_RS02715 SM00287 Bacterial SH3 domain homologues AMBLS11_RS02720 SM01118 AMBLS11_RS02720 AMBLS11_RS02730 SM00927 DNA mismatch repair enzyme MutH AMBLS11_RS02760 SM00448 cheY-homologous receiver domain AMBLS11_RS02765 SM00267 diguanylate cyclase AMBLS11_RS02770 SM00387 Histidine kinase-like ATPases AMBLS11_RS02770 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS02770 SM00448 cheY-homologous receiver domain AMBLS11_RS02795 SM00487 DEAD-like helicases superfamily AMBLS11_RS02795 SM00490 helicase superfamily c-terminal domain AMBLS11_RS02800 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_RS02815 SM00670 Large family of predicted nucleotide-binding domains AMBLS11_RS02830 SM00487 DEAD-like helicases superfamily AMBLS11_RS02830 SM00490 helicase superfamily c-terminal domain AMBLS11_RS02835 SM00028 Tetratricopeptide repeats AMBLS11_RS02870 SM00387 Histidine kinase-like ATPases AMBLS11_RS02870 SM00433 TopoisomeraseII AMBLS11_RS02905 SM00841 Elongation factor P, C-terminal AMBLS11_RS02905 SM01185 AMBLS11_RS02905 AMBLS11_RS02965 SM01012 AMBLS11_RS02965 AMBLS11_RS03010 SM00267 diguanylate cyclase AMBLS11_RS03015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS03015 SM00091 PAS domain AMBLS11_RS03015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS03030 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS03090 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMBLS11_RS03095 SM01007 Class II Aldolase and Adducin N-terminal domain AMBLS11_RS03130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS03130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS03140 SM00400 zinc finger AMBLS11_RS03140 SM00493 AMBLS11_RS03140 AMBLS11_RS03140 SM00766 DNA primase DnaG DnaB-binding AMBLS11_RS03165 SM01207 AMBLS11_RS03165 AMBLS11_RS03170 SM00905 Dihydroneopterin aldolase AMBLS11_RS03205 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_RS03215 SM00387 Histidine kinase-like ATPases AMBLS11_RS03220 SM00448 cheY-homologous receiver domain AMBLS11_RS03220 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS03225 SM00387 Histidine kinase-like ATPases AMBLS11_RS03225 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS03235 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_RS03240 SM00710 Parallel beta-helix repeats AMBLS11_RS03275 SM00028 Tetratricopeptide repeats AMBLS11_RS03280 SM00448 cheY-homologous receiver domain AMBLS11_RS03280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS03285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS03285 SM00091 PAS domain AMBLS11_RS03285 SM00387 Histidine kinase-like ATPases AMBLS11_RS03285 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS03285 SM00448 cheY-homologous receiver domain AMBLS11_RS03290 SM00897 FIST N domain AMBLS11_RS03290 SM01204 AMBLS11_RS03290 AMBLS11_RS03320 SM00387 Histidine kinase-like ATPases AMBLS11_RS03320 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS03320 SM00448 cheY-homologous receiver domain AMBLS11_RS03325 SM00028 Tetratricopeptide repeats AMBLS11_RS03355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS03355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS03370 SM00650 Ribosomal RNA adenine dimethylases AMBLS11_RS03390 SM00271 DnaJ molecular chaperone homology domain AMBLS11_RS03435 SM00954 Region found in RelA / SpoT proteins AMBLS11_RS03465 SM00822 AMBLS11_RS03465 AMBLS11_RS03470 SM01236 AMBLS11_RS03470 AMBLS11_RS03515 SM00387 Histidine kinase-like ATPases AMBLS11_RS03515 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS03520 SM00448 cheY-homologous receiver domain AMBLS11_RS03520 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS03575 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS03580 SM00924 MgtE intracellular N domain AMBLS11_RS03610 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS03640 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS03675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_RS03680 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_RS03715 SM00460 Transglutaminase/protease-like homologues AMBLS11_RS03725 SM00460 Transglutaminase/protease-like homologues AMBLS11_RS03760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS03760 SM00091 PAS domain AMBLS11_RS03760 SM00387 Histidine kinase-like ATPases AMBLS11_RS03760 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS03760 SM00448 cheY-homologous receiver domain AMBLS11_RS03785 SM00861 Transketolase, pyrimidine binding domain AMBLS11_RS03790 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_RS03815 SM00448 cheY-homologous receiver domain AMBLS11_RS03815 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS03820 SM00387 Histidine kinase-like ATPases AMBLS11_RS03820 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS03880 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS03930 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_RS03940 SM01263 AMBLS11_RS03940 AMBLS11_RS03955 SM00448 cheY-homologous receiver domain AMBLS11_RS03955 SM00850 LytTr DNA-binding domain AMBLS11_RS03970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS04010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_RS04010 SM00866 AMBLS11_RS04010 AMBLS11_RS04045 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04075 SM00656 AMBLS11_RS04075 AMBLS11_RS04075 SM00710 Parallel beta-helix repeats AMBLS11_RS04085 SM00387 Histidine kinase-like ATPases AMBLS11_RS04085 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS04090 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04090 SM00448 cheY-homologous receiver domain AMBLS11_RS04110 SM00919 Malic enzyme, NAD binding domain AMBLS11_RS04110 SM01274 AMBLS11_RS04110 AMBLS11_RS04125 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMBLS11_RS04155 SM00850 LytTr DNA-binding domain AMBLS11_RS04170 SM00448 cheY-homologous receiver domain AMBLS11_RS04175 SM00091 PAS domain AMBLS11_RS04195 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS04205 SM00487 DEAD-like helicases superfamily AMBLS11_RS04205 SM00490 helicase superfamily c-terminal domain AMBLS11_RS04210 SM00320 WD40 repeats AMBLS11_RS04220 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS04255 SM01329 AMBLS11_RS04255 AMBLS11_RS04260 SM00917 LeuA allosteric (dimerisation) domain AMBLS11_RS04270 SM01192 AMBLS11_RS04270 AMBLS11_RS04270 SM01193 AMBLS11_RS04270 AMBLS11_RS04280 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMBLS11_RS04280 SM00534 ATPase domain of DNA mismatch repair MUTS family AMBLS11_RS04290 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04300 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04310 SM00387 Histidine kinase-like ATPases AMBLS11_RS04310 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS04315 SM00448 cheY-homologous receiver domain AMBLS11_RS04315 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS04350 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04420 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04460 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_RS04465 SM01329 AMBLS11_RS04465 AMBLS11_RS04485 SM00267 diguanylate cyclase AMBLS11_RS04555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS04600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_RS04610 SM00935 Outer membrane protein (OmpH-like) AMBLS11_RS04635 SM00481 DNA polymerase alpha chain like domain AMBLS11_RS04650 SM00267 diguanylate cyclase AMBLS11_RS04670 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS04675 SM01211 AMBLS11_RS04675 AMBLS11_RS04710 SM00858 AMBLS11_RS04710 AMBLS11_RS04715 SM00260 Two component signalling adaptor domain AMBLS11_RS04715 SM00448 cheY-homologous receiver domain AMBLS11_RS04720 SM00138 Methyltransferase, chemotaxis proteins AMBLS11_RS04765 SM00047 Lysozyme subfamily 2 AMBLS11_RS04920 SM00858 AMBLS11_RS04920 AMBLS11_RS04945 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04950 SM00387 Histidine kinase-like ATPases AMBLS11_RS04950 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS04955 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS04955 SM00448 cheY-homologous receiver domain AMBLS11_RS04980 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05050 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05050 SM00962 SRP54-type protein, GTPase domain AMBLS11_RS05065 SM00448 cheY-homologous receiver domain AMBLS11_RS05075 SM00073 Histidine Phosphotransfer domain AMBLS11_RS05075 SM00260 Two component signalling adaptor domain AMBLS11_RS05075 SM00387 Histidine kinase-like ATPases AMBLS11_RS05075 SM01231 AMBLS11_RS05075 AMBLS11_RS05080 SM00448 cheY-homologous receiver domain AMBLS11_RS05090 SM00260 Two component signalling adaptor domain AMBLS11_RS05095 SM00260 Two component signalling adaptor domain AMBLS11_RS05115 SM01018 B12 binding domain AMBLS11_RS05130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS05130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS05145 SM00947 Carbonic anhydrase AMBLS11_RS05180 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMBLS11_RS05225 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05230 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05250 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05275 SM00091 PAS domain AMBLS11_RS05275 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05290 SM00344 helix_turn_helix ASNC type AMBLS11_RS05295 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBLS11_RS05320 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_RS05335 SM00028 Tetratricopeptide repeats AMBLS11_RS05335 SM00386 HAT (Half-A-TPR) repeats AMBLS11_RS05370 SM00028 Tetratricopeptide repeats AMBLS11_RS05445 SM00829 Enoylreductase AMBLS11_RS05460 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_RS05475 SM00836 DALR anticodon binding domain AMBLS11_RS05475 SM01016 Arginyl tRNA synthetase N terminal dom AMBLS11_RS05490 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS05490 SM00267 diguanylate cyclase AMBLS11_RS05510 SM00267 diguanylate cyclase AMBLS11_RS05545 SM01321 AMBLS11_RS05545 AMBLS11_RS05555 SM00937 AMBLS11_RS05555 AMBLS11_RS05605 SM00463 Small MutS-related domain AMBLS11_RS05635 SM00763 PrkA AAA domain AMBLS11_RS05665 SM00965 Secretin and TonB N terminus short domain AMBLS11_RS05680 SM00479 AMBLS11_RS05680 AMBLS11_RS05705 SM00357 Cold shock protein domain AMBLS11_RS05720 SM00478 endonuclease III AMBLS11_RS05730 SM00900 AMBLS11_RS05730 AMBLS11_RS05770 SM00487 DEAD-like helicases superfamily AMBLS11_RS05770 SM00490 helicase superfamily c-terminal domain AMBLS11_RS05845 SM00267 diguanylate cyclase AMBLS11_RS05870 SM00028 Tetratricopeptide repeats AMBLS11_RS05875 SM00327 von Willebrand factor (vWF) type A domain AMBLS11_RS05910 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS05910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS05910 SM00267 diguanylate cyclase AMBLS11_RS05920 SM00855 Phosphoglycerate mutase family AMBLS11_RS05930 SM01091 Transporter associated domain AMBLS11_RS05940 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS05940 SM00962 SRP54-type protein, GTPase domain AMBLS11_RS05940 SM00963 SRP54-type protein, helical bundle domain AMBLS11_RS05985 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS06040 SM00830 Chorismate mutase type II AMBLS11_RS06070 SM00830 Chorismate mutase type II AMBLS11_RS06075 SM00448 cheY-homologous receiver domain AMBLS11_RS06090 SM00331 Sigma factor PP2C-like phosphatases AMBLS11_RS06090 SM00448 cheY-homologous receiver domain AMBLS11_RS06100 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS06100 SM00267 diguanylate cyclase AMBLS11_RS06110 SM00387 Histidine kinase-like ATPases AMBLS11_RS06110 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS06120 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS06120 SM00448 cheY-homologous receiver domain AMBLS11_RS06125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS06150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_RS06155 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS06250 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_RS06260 SM00267 diguanylate cyclase AMBLS11_RS06280 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS06320 SM00267 diguanylate cyclase AMBLS11_RS06385 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS06385 SM00876 Biotin and Thiamin Synthesis associated domain AMBLS11_RS06410 SM00226 Low molecular weight phosphatase family AMBLS11_RS06420 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS06430 SM00387 Histidine kinase-like ATPases AMBLS11_RS06430 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS06435 SM00448 cheY-homologous receiver domain AMBLS11_RS06435 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS06460 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS06465 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS06475 SM00028 Tetratricopeptide repeats AMBLS11_RS06475 SM00448 cheY-homologous receiver domain AMBLS11_RS06545 SM01321 AMBLS11_RS06545 AMBLS11_RS06560 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS06575 SM00905 Dihydroneopterin aldolase AMBLS11_RS06585 SM00387 Histidine kinase-like ATPases AMBLS11_RS06590 SM00448 cheY-homologous receiver domain AMBLS11_RS06590 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS06640 SM00481 DNA polymerase alpha chain like domain AMBLS11_RS06660 SM00363 S4 RNA-binding domain AMBLS11_RS06670 SM01266 AMBLS11_RS06670 AMBLS11_RS06745 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS06745 SM00448 cheY-homologous receiver domain AMBLS11_RS06755 SM00387 Histidine kinase-like ATPases AMBLS11_RS06755 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS06755 SM00448 cheY-homologous receiver domain AMBLS11_RS06770 SM00271 DnaJ molecular chaperone homology domain AMBLS11_RS06780 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS06780 SM00091 PAS domain AMBLS11_RS06800 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMBLS11_RS06805 SM00851 MGS-like domain AMBLS11_RS06805 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMBLS11_RS06855 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS06855 SM01091 Transporter associated domain AMBLS11_RS06870 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS06915 SM00903 Flavin reductase like domain AMBLS11_RS06990 SM00829 Enoylreductase AMBLS11_RS07005 SM01400 AMBLS11_RS07005 AMBLS11_RS07030 SM00937 AMBLS11_RS07030 AMBLS11_RS07040 SM00448 cheY-homologous receiver domain AMBLS11_RS07080 SM00838 Elongation factor G C-terminus AMBLS11_RS07080 SM00889 Elongation factor G, domain IV AMBLS11_RS07085 SM01116 AMBLS11_RS07085 AMBLS11_RS07090 SM00219 Tyrosine kinase, catalytic domain AMBLS11_RS07090 SM00331 Sigma factor PP2C-like phosphatases AMBLS11_RS07090 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMBLS11_RS07100 SM00460 Transglutaminase/protease-like homologues AMBLS11_RS07135 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS07135 SM00267 diguanylate cyclase AMBLS11_RS07210 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_RS07225 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS07225 SM00091 PAS domain AMBLS11_RS07225 SM00267 diguanylate cyclase AMBLS11_RS07230 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS07230 SM00267 diguanylate cyclase AMBLS11_RS07275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS07275 SM00091 PAS domain AMBLS11_RS07275 SM00267 diguanylate cyclase AMBLS11_RS07305 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_RS07310 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMBLS11_RS07345 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS07345 SM00091 PAS domain AMBLS11_RS07345 SM00267 diguanylate cyclase AMBLS11_RS07345 SM00448 cheY-homologous receiver domain AMBLS11_RS07350 SM00267 diguanylate cyclase AMBLS11_RS07350 SM00448 cheY-homologous receiver domain AMBLS11_RS07355 SM00387 Histidine kinase-like ATPases AMBLS11_RS07355 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS07355 SM00448 cheY-homologous receiver domain AMBLS11_RS07445 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMBLS11_RS07515 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS07515 SM00267 diguanylate cyclase AMBLS11_RS07580 SM00710 Parallel beta-helix repeats AMBLS11_RS07625 SM00873 B3/4 domain AMBLS11_RS07625 SM00874 tRNA synthetase B5 domain AMBLS11_RS07625 SM00896 Ferredoxin-fold anticodon binding domain AMBLS11_RS07630 SM00411 bacterial (prokaryotic) histone like domain AMBLS11_RS07665 SM00487 DEAD-like helicases superfamily AMBLS11_RS07665 SM00490 helicase superfamily c-terminal domain AMBLS11_RS07665 SM00982 AMBLS11_RS07665 AMBLS11_RS07665 SM01058 CarD-like/TRCF domain AMBLS11_RS07685 SM00387 Histidine kinase-like ATPases AMBLS11_RS07690 SM00897 FIST N domain AMBLS11_RS07690 SM01204 AMBLS11_RS07690 AMBLS11_RS07765 SM00878 Biotin carboxylase C-terminal domain AMBLS11_RS07785 SM00422 helix_turn_helix, mercury resistance AMBLS11_RS07805 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS07805 SM00267 diguanylate cyclase AMBLS11_RS07815 SM00479 AMBLS11_RS07815 AMBLS11_RS07820 SM00387 Histidine kinase-like ATPases AMBLS11_RS07820 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS07820 SM00448 cheY-homologous receiver domain AMBLS11_RS07830 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS07845 SM00267 diguanylate cyclase AMBLS11_RS07850 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS07860 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS07860 SM00487 DEAD-like helicases superfamily AMBLS11_RS07860 SM00490 helicase superfamily c-terminal domain AMBLS11_RS07860 SM00847 Helicase associated domain (HA2) Add an annotation AMBLS11_RS07875 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMBLS11_RS07880 SM00829 Enoylreductase AMBLS11_RS07890 SM00479 AMBLS11_RS07890 AMBLS11_RS07920 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS07925 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS07940 SM00634 Bacterial Ig-like domain (group 1) AMBLS11_RS07950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMBLS11_RS07950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMBLS11_RS07950 SM00493 AMBLS11_RS07950 AMBLS11_RS07995 SM00587 ZnF_C4 abd HLH domain containing kinases domain AMBLS11_RS08000 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS08005 SM00363 S4 RNA-binding domain AMBLS11_RS08040 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMBLS11_RS08045 SM00822 AMBLS11_RS08045 AMBLS11_RS08055 SM00825 Beta-ketoacyl synthase AMBLS11_RS08095 SM00267 diguanylate cyclase AMBLS11_RS08220 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS08220 SM00091 PAS domain AMBLS11_RS08220 SM00387 Histidine kinase-like ATPases AMBLS11_RS08220 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS08220 SM00448 cheY-homologous receiver domain AMBLS11_RS08225 SM00448 cheY-homologous receiver domain AMBLS11_RS08225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS08235 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS08255 SM01387 AMBLS11_RS08255 AMBLS11_RS08260 SM00091 PAS domain AMBLS11_RS08260 SM00267 diguanylate cyclase AMBLS11_RS08265 SM00363 S4 RNA-binding domain AMBLS11_RS08280 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_RS08285 SM00448 cheY-homologous receiver domain AMBLS11_RS08340 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS08355 SM00267 diguanylate cyclase AMBLS11_RS08380 SM00822 AMBLS11_RS08380 AMBLS11_RS08400 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS08425 SM00347 helix_turn_helix multiple antibiotic resistance protein AMBLS11_RS08440 SM00028 Tetratricopeptide repeats AMBLS11_RS08465 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_RS08490 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMBLS11_RS08495 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMBLS11_RS08525 SM00357 Cold shock protein domain AMBLS11_RS08535 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS08535 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS08540 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS08590 SM00870 AMBLS11_RS08590 AMBLS11_RS08595 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS08610 SM00936 Penicillin-binding protein 5, C-terminal domain AMBLS11_RS08685 SM01103 AMBLS11_RS08685 AMBLS11_RS08695 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS08725 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS08725 SM00267 diguanylate cyclase AMBLS11_RS08725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS08740 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBLS11_RS08745 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMBLS11_RS08745 SM00195 Dual specificity phosphatase, catalytic domain AMBLS11_RS08795 SM00507 HNH nucleases AMBLS11_RS08800 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS08800 SM00322 K homology RNA-binding domain AMBLS11_RS08930 SM00028 Tetratricopeptide repeats AMBLS11_RS08950 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMBLS11_RS08955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_RS08955 SM00292 breast cancer carboxy-terminal domain AMBLS11_RS08955 SM00532 Ligase N family AMBLS11_RS08965 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS08970 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS08995 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS09000 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS09070 SM00861 Transketolase, pyrimidine binding domain AMBLS11_RS09085 SM00881 CoA binding domain AMBLS11_RS09130 SM00642 Alpha-amylase domain AMBLS11_RS09135 SM00642 Alpha-amylase domain AMBLS11_RS09145 SM00642 Alpha-amylase domain AMBLS11_RS09150 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS09270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_RS09285 SM00387 Histidine kinase-like ATPases AMBLS11_RS09290 SM00448 cheY-homologous receiver domain AMBLS11_RS09290 SM00850 LytTr DNA-binding domain AMBLS11_RS09310 SM00822 AMBLS11_RS09310 AMBLS11_RS09320 SM00829 Enoylreductase AMBLS11_RS09330 SM00028 Tetratricopeptide repeats AMBLS11_RS09330 SM00448 cheY-homologous receiver domain AMBLS11_RS09340 SM00450 Rhodanese Homology Domain AMBLS11_RS09345 SM00054 EF-hand, calcium binding motif AMBLS11_RS09360 SM00487 DEAD-like helicases superfamily AMBLS11_RS09360 SM00490 helicase superfamily c-terminal domain AMBLS11_RS09365 SM00882 Coenzyme A transferase AMBLS11_RS09370 SM00882 Coenzyme A transferase AMBLS11_RS09430 SM00861 Transketolase, pyrimidine binding domain AMBLS11_RS09445 SM00220 Serine/Threonine protein kinases, catalytic domain AMBLS11_RS09480 SM00945 ProQ/FINO family AMBLS11_RS09485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMBLS11_RS09485 SM00245 tail specific protease AMBLS11_RS09540 SM00981 AMBLS11_RS09540 AMBLS11_RS09550 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS09600 SM00450 Rhodanese Homology Domain AMBLS11_RS09600 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS09695 SM00100 Cyclic nucleotide-monophosphate binding domain AMBLS11_RS09695 SM00419 helix_turn_helix, cAMP Regulatory protein AMBLS11_RS09740 SM00450 Rhodanese Homology Domain AMBLS11_RS09750 SM01144 AMBLS11_RS09750 AMBLS11_RS09755 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS09795 SM00487 DEAD-like helicases superfamily AMBLS11_RS09865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMBLS11_RS09865 SM00465 GIY-YIG type nucleases (URI domain) AMBLS11_RS09870 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS09870 SM00448 cheY-homologous receiver domain AMBLS11_RS09995 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS10005 SM00843 AMBLS11_RS10005 AMBLS11_RS10010 SM00344 helix_turn_helix ASNC type AMBLS11_RS10015 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMBLS11_RS10015 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMBLS11_RS10020 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMBLS11_RS10025 SM00028 Tetratricopeptide repeats AMBLS11_RS10040 SM00411 bacterial (prokaryotic) histone like domain AMBLS11_RS10045 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS10065 SM00434 DNA Topoisomerase IV AMBLS11_RS10105 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS10105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS10105 SM00267 diguanylate cyclase AMBLS11_RS10125 SM01130 AMBLS11_RS10125 AMBLS11_RS10215 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS10215 SM00448 cheY-homologous receiver domain AMBLS11_RS10245 SM00642 Alpha-amylase domain AMBLS11_RS10255 SM00852 Probable molybdopterin binding domain AMBLS11_RS10275 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS10530 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AMBLS11_RS10540 SM00563 Phosphate acyltransferases AMBLS11_RS10585 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS10620 SM00893 Electron transfer flavoprotein domain AMBLS11_RS10625 SM00893 Electron transfer flavoprotein domain AMBLS11_RS10635 SM00528 Domain in histone-like proteins of HNS family AMBLS11_RS10655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS10655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS10670 SM00797 Allophanate hydrolase subunit 2 AMBLS11_RS10675 SM00796 Allophanate hydrolase subunit 1 AMBLS11_RS10725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS10730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS10765 SM00642 Alpha-amylase domain AMBLS11_RS10775 SM00829 Enoylreductase AMBLS11_RS10790 SM00855 Phosphoglycerate mutase family AMBLS11_RS10820 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS10825 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS10855 SM00852 Probable molybdopterin binding domain AMBLS11_RS10960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_RS10995 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS10995 SM00267 diguanylate cyclase AMBLS11_RS11000 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS11030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMBLS11_RS11050 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS11050 SM00448 cheY-homologous receiver domain AMBLS11_RS11060 SM00387 Histidine kinase-like ATPases AMBLS11_RS11060 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS11065 SM00448 cheY-homologous receiver domain AMBLS11_RS11070 SM00387 Histidine kinase-like ATPases AMBLS11_RS11070 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS11070 SM00448 cheY-homologous receiver domain AMBLS11_RS11095 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS11135 SM00631 AMBLS11_RS11135 AMBLS11_RS11140 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_RS11155 SM01350 AMBLS11_RS11155 AMBLS11_RS11160 SM00642 Alpha-amylase domain AMBLS11_RS11165 SM00642 Alpha-amylase domain AMBLS11_RS11175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_RS11245 SM00749 bacterial OsmY and nodulation domain AMBLS11_RS11315 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS11320 SM00858 AMBLS11_RS11320 AMBLS11_RS11365 SM00710 Parallel beta-helix repeats AMBLS11_RS11375 SM00387 Histidine kinase-like ATPases AMBLS11_RS11375 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS11375 SM00448 cheY-homologous receiver domain AMBLS11_RS11400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS11400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS11440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS11445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS11445 SM00387 Histidine kinase-like ATPases AMBLS11_RS11460 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS11515 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS11520 SM00257 Lysin motif AMBLS11_RS11535 SM00840 AMBLS11_RS11535 AMBLS11_RS11555 SM00244 prohibitin homologues AMBLS11_RS11575 SM00642 Alpha-amylase domain AMBLS11_RS11585 SM00829 Enoylreductase AMBLS11_RS11595 SM00829 Enoylreductase AMBLS11_RS11660 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_RS11670 SM01007 Class II Aldolase and Adducin N-terminal domain AMBLS11_RS11675 SM00100 Cyclic nucleotide-monophosphate binding domain AMBLS11_RS11675 SM00419 helix_turn_helix, cAMP Regulatory protein AMBLS11_RS11690 SM00825 Beta-ketoacyl synthase AMBLS11_RS11720 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS11730 SM00387 Histidine kinase-like ATPases AMBLS11_RS11730 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS11730 SM00448 cheY-homologous receiver domain AMBLS11_RS11845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_RS11885 SM00341 Helicase and RNase D C-terminal AMBLS11_RS11885 SM00474 3'-5' exonuclease AMBLS11_RS11915 SM00487 DEAD-like helicases superfamily AMBLS11_RS11915 SM00488 AMBLS11_RS11915 AMBLS11_RS11915 SM00491 AMBLS11_RS11915 AMBLS11_RS11940 SM00014 Acid phosphatase homologues AMBLS11_RS11955 SM00014 Acid phosphatase homologues AMBLS11_RS11965 SM00642 Alpha-amylase domain AMBLS11_RS12050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS12050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS12080 SM00387 Histidine kinase-like ATPases AMBLS11_RS12085 SM00493 AMBLS11_RS12085 AMBLS11_RS12100 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12155 SM00422 helix_turn_helix, mercury resistance AMBLS11_RS12165 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12190 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS12200 SM00091 PAS domain AMBLS11_RS12200 SM00267 diguanylate cyclase AMBLS11_RS12255 SM00028 Tetratricopeptide repeats AMBLS11_RS12275 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12275 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS12285 SM00363 S4 RNA-binding domain AMBLS11_RS12355 SM00861 Transketolase, pyrimidine binding domain AMBLS11_RS12410 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12420 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12455 SM00358 Double-stranded RNA binding motif AMBLS11_RS12455 SM00535 Ribonuclease III family AMBLS11_RS12465 SM00838 Elongation factor G C-terminus AMBLS11_RS12650 SM00990 AMBLS11_RS12650 AMBLS11_RS12680 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_RS12775 SM00938 Nitrogen regulatory protein P-II AMBLS11_RS12860 SM00904 Riboflavin kinase AMBLS11_RS12905 SM00563 Phosphate acyltransferases AMBLS11_RS12925 SM00411 bacterial (prokaryotic) histone like domain AMBLS11_RS12930 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12930 SM00464 Found in ATP-dependent protease La (LON) AMBLS11_RS12935 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS12935 SM00994 ClpX C4-type zinc finger AMBLS11_RS12935 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS13025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS13045 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS13045 SM01240 AMBLS11_RS13045 AMBLS11_RS13070 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS13075 SM00564 beta-propeller repeat AMBLS11_RS13080 SM00028 Tetratricopeptide repeats AMBLS11_RS13095 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_RS13100 SM00028 Tetratricopeptide repeats AMBLS11_RS13100 SM00257 Lysin motif AMBLS11_RS13115 SM00562 AMBLS11_RS13115 AMBLS11_RS13145 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS13195 SM00850 LytTr DNA-binding domain AMBLS11_RS13210 SM01323 AMBLS11_RS13210 AMBLS11_RS13280 SM00098 Alkaline phosphatase homologues AMBLS11_RS13285 SM00260 Two component signalling adaptor domain AMBLS11_RS13285 SM00448 cheY-homologous receiver domain AMBLS11_RS13330 SM00028 Tetratricopeptide repeats AMBLS11_RS13445 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS13450 SM00465 GIY-YIG type nucleases (URI domain) AMBLS11_RS13515 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS13515 SM00267 diguanylate cyclase AMBLS11_RS13535 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS13565 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMBLS11_RS13570 SM00460 Transglutaminase/protease-like homologues AMBLS11_RS13630 SM00422 helix_turn_helix, mercury resistance AMBLS11_RS13720 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMBLS11_RS13725 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_RS13780 SM00448 cheY-homologous receiver domain AMBLS11_RS13780 SM00850 LytTr DNA-binding domain AMBLS11_RS13865 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBLS11_RS13865 SM01232 AMBLS11_RS13865 AMBLS11_RS13880 SM01321 AMBLS11_RS13880 AMBLS11_RS13885 SM00487 DEAD-like helicases superfamily AMBLS11_RS13885 SM00490 helicase superfamily c-terminal domain AMBLS11_RS13900 SM00028 Tetratricopeptide repeats AMBLS11_RS13900 SM00387 Histidine kinase-like ATPases AMBLS11_RS13900 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS13900 SM00448 cheY-homologous receiver domain AMBLS11_RS13910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS13910 SM00387 Histidine kinase-like ATPases AMBLS11_RS13910 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS13910 SM00448 cheY-homologous receiver domain AMBLS11_RS13925 SM00448 cheY-homologous receiver domain AMBLS11_RS13925 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS13930 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS13960 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_RS14000 SM01081 Putative carbohydrate binding domain AMBLS11_RS14010 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS14065 SM01011 Aminopeptidase P, N-terminal domain AMBLS11_RS14090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS14090 SM00387 Histidine kinase-like ATPases AMBLS11_RS14090 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS14090 SM00448 cheY-homologous receiver domain AMBLS11_RS14165 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMBLS11_RS14165 SM00895 AMBLS11_RS14165 AMBLS11_RS14175 SM00644 AMBLS11_RS14175 AMBLS11_RS14230 SM00957 SecA DEAD-like domain AMBLS11_RS14230 SM00958 SecA preprotein cross-linking domain AMBLS11_RS14245 SM00864 Tubulin/FtsZ family, GTPase domain AMBLS11_RS14245 SM00865 Tubulin/FtsZ family, C-terminal domain AMBLS11_RS14250 SM00842 Cell division protein FtsA AMBLS11_RS14375 SM00028 Tetratricopeptide repeats AMBLS11_RS14375 SM00267 diguanylate cyclase AMBLS11_RS14385 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS14385 SM00448 cheY-homologous receiver domain AMBLS11_RS14390 SM00387 Histidine kinase-like ATPases AMBLS11_RS14430 SM00732 Likely ribonuclease with RNase H fold. AMBLS11_RS14440 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS14475 SM00028 Tetratricopeptide repeats AMBLS11_RS14525 SM00360 RNA recognition motif AMBLS11_RS14545 SM00986 Uracil DNA glycosylase superfamily AMBLS11_RS14545 SM00987 UreE urease accessory protein, C-terminal domain AMBLS11_RS14575 SM00829 Enoylreductase AMBLS11_RS14580 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS14580 SM00448 cheY-homologous receiver domain AMBLS11_RS14600 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMBLS11_RS14605 SM00226 Low molecular weight phosphatase family AMBLS11_RS14630 SM00448 cheY-homologous receiver domain AMBLS11_RS14640 SM00448 cheY-homologous receiver domain AMBLS11_RS14640 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS14645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS14645 SM00387 Histidine kinase-like ATPases AMBLS11_RS14645 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS14680 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS14735 SM00749 bacterial OsmY and nodulation domain AMBLS11_RS14760 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS14760 SM00448 cheY-homologous receiver domain AMBLS11_RS14805 SM00267 diguanylate cyclase AMBLS11_RS14805 SM00448 cheY-homologous receiver domain AMBLS11_RS14825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS14825 SM00091 PAS domain AMBLS11_RS14825 SM00387 Histidine kinase-like ATPases AMBLS11_RS14825 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS14825 SM00448 cheY-homologous receiver domain AMBLS11_RS14830 SM00287 Bacterial SH3 domain homologues AMBLS11_RS14830 SM00644 AMBLS11_RS14830 AMBLS11_RS14875 SM00450 Rhodanese Homology Domain AMBLS11_RS15050 SM00448 cheY-homologous receiver domain AMBLS11_RS15060 SM01230 AMBLS11_RS15060 AMBLS11_RS15070 SM00091 PAS domain AMBLS11_RS15070 SM00387 Histidine kinase-like ATPases AMBLS11_RS15070 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS15075 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS15075 SM00448 cheY-homologous receiver domain AMBLS11_RS15080 SM00073 Histidine Phosphotransfer domain AMBLS11_RS15085 SM00563 Phosphate acyltransferases AMBLS11_RS15100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS15100 SM00091 PAS domain AMBLS11_RS15100 SM00267 diguanylate cyclase AMBLS11_RS15110 SM00244 prohibitin homologues AMBLS11_RS15120 SM00387 Histidine kinase-like ATPases AMBLS11_RS15120 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS15120 SM00448 cheY-homologous receiver domain AMBLS11_RS15120 SM01358 AMBLS11_RS15120 AMBLS11_RS15220 SM00831 Cation transporter/ATPase, N-terminus AMBLS11_RS15225 SM00419 helix_turn_helix, cAMP Regulatory protein AMBLS11_RS15230 SM01068 Putative carbohydrate binding domain AMBLS11_RS15240 SM00244 prohibitin homologues AMBLS11_RS15245 SM00244 prohibitin homologues AMBLS11_RS15250 SM00267 diguanylate cyclase AMBLS11_RS15255 SM00460 Transglutaminase/protease-like homologues AMBLS11_RS15285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS15285 SM00091 PAS domain AMBLS11_RS15285 SM00387 Histidine kinase-like ATPases AMBLS11_RS15285 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS15285 SM00448 cheY-homologous receiver domain AMBLS11_RS15310 SM00829 Enoylreductase AMBLS11_RS15325 SM00448 cheY-homologous receiver domain AMBLS11_RS15325 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS15330 SM00387 Histidine kinase-like ATPases AMBLS11_RS15330 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS15345 SM00886 Stress responsive A/B Barrel Domain AMBLS11_RS15390 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS15390 SM01027 Beta-Casp domain AMBLS11_RS15410 SM00996 S-adenosyl-L-homocysteine hydrolase AMBLS11_RS15410 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMBLS11_RS15415 SM00267 diguanylate cyclase AMBLS11_RS15430 SM00564 beta-propeller repeat AMBLS11_RS15435 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS15450 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS15480 SM00729 Elongator protein 3, MiaB family, Radical SAM AMBLS11_RS15505 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS15505 SM00448 cheY-homologous receiver domain AMBLS11_RS15510 SM00091 PAS domain AMBLS11_RS15510 SM00387 Histidine kinase-like ATPases AMBLS11_RS15510 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS15510 SM00448 cheY-homologous receiver domain AMBLS11_RS15515 SM00897 FIST N domain AMBLS11_RS15515 SM01204 AMBLS11_RS15515 AMBLS11_RS15520 SM00900 AMBLS11_RS15520 AMBLS11_RS15530 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS15530 SM00448 cheY-homologous receiver domain AMBLS11_RS15540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS15540 SM00091 PAS domain AMBLS11_RS15540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS15590 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS15620 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMBLS11_RS15625 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS15625 SM00448 cheY-homologous receiver domain AMBLS11_RS15630 SM00387 Histidine kinase-like ATPases AMBLS11_RS15640 SM00487 DEAD-like helicases superfamily AMBLS11_RS15640 SM00490 helicase superfamily c-terminal domain AMBLS11_RS15665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS15665 SM00091 PAS domain AMBLS11_RS15665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS15670 SM00155 Phospholipase D. Active site motifs. AMBLS11_RS15700 SM00448 cheY-homologous receiver domain AMBLS11_RS15710 SM00387 Histidine kinase-like ATPases AMBLS11_RS15715 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS15720 SM00486 DNA polymerase type-B family AMBLS11_RS15750 SM00360 RNA recognition motif AMBLS11_RS15785 SM00986 Uracil DNA glycosylase superfamily AMBLS11_RS15785 SM00987 UreE urease accessory protein, C-terminal domain AMBLS11_RS15790 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS15790 SM00267 diguanylate cyclase AMBLS11_RS15790 SM00448 cheY-homologous receiver domain AMBLS11_RS15870 SM00173 Ras subfamily of RAS small GTPases AMBLS11_RS15870 SM00174 Rho (Ras homology) subfamily of Ras-like small GTPases AMBLS11_RS15870 SM00175 Rab subfamily of small GTPases AMBLS11_RS15875 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS15875 SM00267 diguanylate cyclase AMBLS11_RS15885 SM00563 Phosphate acyltransferases AMBLS11_RS15890 SM00563 Phosphate acyltransferases AMBLS11_RS16025 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS16025 SM00267 diguanylate cyclase AMBLS11_RS16045 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS16090 SM00530 Helix-turn-helix XRE-family like proteins AMBLS11_RS16095 SM00100 Cyclic nucleotide-monophosphate binding domain AMBLS11_RS16120 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS16125 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS16170 SM00900 AMBLS11_RS16170 AMBLS11_RS16250 SM00028 Tetratricopeptide repeats AMBLS11_RS16255 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMBLS11_RS16265 SM00267 diguanylate cyclase AMBLS11_RS16265 SM00448 cheY-homologous receiver domain AMBLS11_RS16270 SM00479 AMBLS11_RS16270 AMBLS11_RS16275 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS16290 SM00387 Histidine kinase-like ATPases AMBLS11_RS16290 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS16290 SM00448 cheY-homologous receiver domain AMBLS11_RS16320 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS16320 SM00448 cheY-homologous receiver domain AMBLS11_RS16340 SM01358 AMBLS11_RS16340 AMBLS11_RS16360 SM00028 Tetratricopeptide repeats AMBLS11_RS16360 SM00220 Serine/Threonine protein kinases, catalytic domain AMBLS11_RS16365 SM00387 Histidine kinase-like ATPases AMBLS11_RS16370 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS16370 SM00448 cheY-homologous receiver domain AMBLS11_RS16385 SM00248 ankyrin repeats AMBLS11_RS16390 SM01060 AMBLS11_RS16390 AMBLS11_RS16440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS16500 SM00984 UDP binding domain AMBLS11_RS16610 SM00662 RNA polymerases D AMBLS11_RS16615 SM00363 S4 RNA-binding domain AMBLS11_RS16615 SM01390 AMBLS11_RS16615 AMBLS11_RS16680 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMBLS11_RS16685 SM01374 AMBLS11_RS16685 AMBLS11_RS16690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS16690 SM00387 Histidine kinase-like ATPases AMBLS11_RS16690 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS16690 SM00448 cheY-homologous receiver domain AMBLS11_RS16715 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMBLS11_RS16720 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS16720 SM00357 Cold shock protein domain AMBLS11_RS16720 SM00955 AMBLS11_RS16720 AMBLS11_RS16755 SM00671 Sel1-like repeats. AMBLS11_RS16790 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS16795 SM00387 Histidine kinase-like ATPases AMBLS11_RS16795 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS16795 SM00448 cheY-homologous receiver domain AMBLS11_RS16815 SM00344 helix_turn_helix ASNC type AMBLS11_RS16825 SM00357 Cold shock protein domain AMBLS11_RS16855 SM00448 cheY-homologous receiver domain AMBLS11_RS16865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS16865 SM00387 Histidine kinase-like ATPases AMBLS11_RS16865 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS16870 SM00448 cheY-homologous receiver domain AMBLS11_RS16880 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMBLS11_RS16910 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS16915 SM00421 helix_turn_helix, Lux Regulon AMBLS11_RS16940 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS16940 SM01086 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS16960 SM00487 DEAD-like helicases superfamily AMBLS11_RS16960 SM00490 helicase superfamily c-terminal domain AMBLS11_RS16975 SM00919 Malic enzyme, NAD binding domain AMBLS11_RS16975 SM01274 AMBLS11_RS16975 AMBLS11_RS17025 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS17040 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17045 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17045 SM00962 SRP54-type protein, GTPase domain AMBLS11_RS17045 SM00963 SRP54-type protein, helical bundle domain AMBLS11_RS17115 SM00052 Putative diguanylate phosphodiesterase AMBLS11_RS17130 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17135 SM00448 cheY-homologous receiver domain AMBLS11_RS17135 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS17140 SM00387 Histidine kinase-like ATPases AMBLS11_RS17140 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS17150 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS17200 SM00028 Tetratricopeptide repeats AMBLS11_RS17240 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AMBLS11_RS17265 SM00838 Elongation factor G C-terminus AMBLS11_RS17265 SM00889 Elongation factor G, domain IV AMBLS11_RS17280 SM00663 RNA polymerase I subunit A N-terminus AMBLS11_RS17305 SM00649 Ribosomal protein L11/L12 AMBLS11_RS17310 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMBLS11_RS17310 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMBLS11_RS17325 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17350 SM00487 DEAD-like helicases superfamily AMBLS11_RS17350 SM00490 helicase superfamily c-terminal domain AMBLS11_RS17390 SM00642 Alpha-amylase domain AMBLS11_RS17425 SM00487 DEAD-like helicases superfamily AMBLS11_RS17425 SM00490 helicase superfamily c-terminal domain AMBLS11_RS17445 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS17455 SM00841 Elongation factor P, C-terminal AMBLS11_RS17455 SM01185 AMBLS11_RS17455 AMBLS11_RS17530 SM00244 prohibitin homologues AMBLS11_RS17535 SM00244 prohibitin homologues AMBLS11_RS17565 SM00257 Lysin motif AMBLS11_RS17565 SM00646 AMBLS11_RS17565 AMBLS11_RS17635 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17665 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS17695 SM00387 Histidine kinase-like ATPases AMBLS11_RS17695 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS17705 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS17720 SM00387 Histidine kinase-like ATPases AMBLS11_RS17725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMBLS11_RS17785 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS17795 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17800 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17825 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS17955 SM00116 Domain in cystathionine beta-synthase and other proteins. AMBLS11_RS17965 SM00867 YceI-like domain AMBLS11_RS18000 SM00829 Enoylreductase AMBLS11_RS18005 SM00267 diguanylate cyclase AMBLS11_RS18010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS18010 SM00387 Histidine kinase-like ATPases AMBLS11_RS18010 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS18010 SM00448 cheY-homologous receiver domain AMBLS11_RS18030 SM00420 helix_turn_helix, Deoxyribose operon repressor AMBLS11_RS18030 SM01134 AMBLS11_RS18030 AMBLS11_RS18045 SM00267 diguanylate cyclase AMBLS11_RS18060 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS18060 SM01009 AlkA N-terminal domain AMBLS11_RS18090 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMBLS11_RS18090 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMBLS11_RS18140 SM00965 Secretin and TonB N terminus short domain AMBLS11_RS18200 SM00346 helix_turn_helix isocitrate lyase regulation AMBLS11_RS18215 SM00656 AMBLS11_RS18215 AMBLS11_RS18270 SM00857 Resolvase, N terminal domain AMBLS11_RS18280 SM00974 AMBLS11_RS18280 AMBLS11_RS18290 SM00883 Chaperonin 10 Kd subunit AMBLS11_RS18325 SM00878 Biotin carboxylase C-terminal domain AMBLS11_RS18350 SM00479 AMBLS11_RS18350 AMBLS11_RS18350 SM00990 AMBLS11_RS18350 AMBLS11_RS18380 SM00062 Bacterial periplasmic substrate-binding proteins AMBLS11_RS18400 SM00798 AICARFT/IMPCHase bienzyme AMBLS11_RS18400 SM00851 MGS-like domain AMBLS11_RS18410 SM01209 AMBLS11_RS18410 AMBLS11_RS18410 SM01210 AMBLS11_RS18410 AMBLS11_RS18435 SM00448 cheY-homologous receiver domain AMBLS11_RS18435 SM00862 Transcriptional regulatory protein, C terminal AMBLS11_RS18440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMBLS11_RS18440 SM00387 Histidine kinase-like ATPases AMBLS11_RS18440 SM00388 His Kinase A (phosphoacceptor) domain AMBLS11_RS18465 SM00363 S4 RNA-binding domain AMBLS11_RS18480 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS18535 SM00849 Metallo-beta-lactamase superfamily AMBLS11_RS18565 SM00867 YceI-like domain AMBLS11_RS18600 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS18620 SM00320 WD40 repeats AMBLS11_RS18640 SM00316 Ribosomal protein S1-like RNA-binding domain AMBLS11_RS18640 SM00732 Likely ribonuclease with RNase H fold. AMBLS11_RS18650 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMBLS11_RS18665 SM00342 helix_turn_helix, arabinose operon control protein AMBLS11_RS18700 SM00633 Glycosyl hydrolase family 10 AMBLS11_RS18710 SM00861 Transketolase, pyrimidine binding domain AMBLS11_RS18750 SM00710 Parallel beta-helix repeats AMBLS11_RS18760 SM00813 Alpha-L-arabinofuranosidase C-terminus AMBLS11_RS18790 SM00631 AMBLS11_RS18790 AMBLS11_RS18895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMBLS11_RS18895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMBLS11_RS18895 SM00091 PAS domain AMBLS11_RS18895 SM00267 diguanylate cyclase AMBLS11_RS18900 SM00563 Phosphate acyltransferases AMBLS11_RS18920 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS18985 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMBLS11_RS19105 SM00354 helix_turn _helix lactose operon repressor AMBLS11_RS19125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMBLS11_RS19135 SM01144 AMBLS11_RS19135 AMBLS11_RS19160 SM00382 ATPases associated with a variety of cellular activities AMBLS11_RS19200 SM00470 ParB-like nuclease domain AMBLS11_RS19215 SM01228 AMBLS11_RS19215 AMBLS11_RS19270 SM00858 AMBLS11_RS19270