locus-tag class description AMBLS11_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMBLS11_RS00005 PF11638 DnaA N-terminal domain AMBLS11_RS00005 PF00308 Bacterial dnaA protein AMBLS11_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMBLS11_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMBLS11_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMBLS11_RS00015 PF02463 RecF/RecN/SMC N terminal domain AMBLS11_RS00020 PF01751 Toprim domain AMBLS11_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS00020 PF18053 DNA gyrase B subunit insert domain AMBLS11_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus AMBLS11_RS00020 PF00204 DNA gyrase B AMBLS11_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit AMBLS11_RS00030 PF05746 DALR anticodon binding domain AMBLS11_RS00035 PF02091 Glycyl-tRNA synthetase alpha subunit AMBLS11_RS00040 PF03352 Methyladenine glycosylase AMBLS11_RS00050 PF04220 Der GTPase activator (YihI) AMBLS11_RS00060 PF00034 Cytochrome c AMBLS11_RS00065 PF01926 50S ribosome-binding GTPase AMBLS11_RS00070 PF01612 3'-5' exonuclease AMBLS11_RS00070 PF01367 5'-3' exonuclease, C-terminal SAM fold AMBLS11_RS00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMBLS11_RS00070 PF00476 DNA polymerase family A AMBLS11_RS00080 PF02386 Cation transport protein AMBLS11_RS00090 PF13276 HTH-like domain AMBLS11_RS00090 PF13333 Integrase core domain AMBLS11_RS00090 PF00665 Integrase core domain AMBLS11_RS00095 PF02080 TrkA-C domain AMBLS11_RS00095 PF02254 TrkA-N domain AMBLS11_RS00100 PF01189 16S rRNA methyltransferase RsmB/F AMBLS11_RS00100 PF01029 NusB family AMBLS11_RS00105 PF00551 Formyl transferase AMBLS11_RS00105 PF02911 Formyl transferase, C-terminal domain AMBLS11_RS00110 PF01327 Polypeptide deformylase AMBLS11_RS00120 PF02481 DNA recombination-mediator protein A AMBLS11_RS00120 PF17782 DprA winged helix domain AMBLS11_RS00125 PF04361 Protein of unknown function (DUF494) AMBLS11_RS00135 PF01300 Telomere recombination AMBLS11_RS00140 PF01218 Coproporphyrinogen III oxidase AMBLS11_RS00145 PF03922 OmpW family AMBLS11_RS00155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMBLS11_RS00155 PF08501 Shikimate dehydrogenase substrate binding domain AMBLS11_RS00155 PF01488 Shikimate / quinate 5-dehydrogenase AMBLS11_RS00160 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS00195 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMBLS11_RS00195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMBLS11_RS00195 PF14579 Helix-hairpin-helix motif AMBLS11_RS00195 PF02811 PHP domain AMBLS11_RS00195 PF01336 OB-fold nucleic acid binding domain AMBLS11_RS00225 PF04389 Peptidase family M28 AMBLS11_RS00225 PF02225 PA domain AMBLS11_RS00230 PF00440 Bacterial regulatory proteins, tetR family AMBLS11_RS00235 PF02441 Flavoprotein AMBLS11_RS00235 PF04127 DNA / pantothenate metabolism flavoprotein AMBLS11_RS00240 PF04002 RadC-like JAB domain AMBLS11_RS00260 PF06082 Exopolysaccharide biosynthesis protein YbjH AMBLS11_RS00265 PF00830 Ribosomal L28 family AMBLS11_RS00270 PF00471 Ribosomal protein L33 AMBLS11_RS00280 PF06827 Zinc finger found in FPG and IleRS AMBLS11_RS00280 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBLS11_RS00280 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMBLS11_RS00285 PF01467 Cytidylyltransferase-like AMBLS11_RS00305 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS00305 PF00563 EAL domain AMBLS11_RS00305 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00310 PF00155 Aminotransferase class I and II AMBLS11_RS00315 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS00315 PF00107 Zinc-binding dehydrogenase AMBLS11_RS00320 PF00581 Rhodanese-like domain AMBLS11_RS00325 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AMBLS11_RS00325 PF01694 Rhomboid family AMBLS11_RS00335 PF04345 Chorismate lyase AMBLS11_RS00340 PF01040 UbiA prenyltransferase family AMBLS11_RS00345 PF04380 Membrane fusogenic activity AMBLS11_RS00350 PF13361 UvrD-like helicase C-terminal domain AMBLS11_RS00350 PF00580 UvrD/REP helicase N-terminal domain AMBLS11_RS00355 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00355 PF00563 EAL domain AMBLS11_RS00355 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS00360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMBLS11_RS00390 PF00145 C-5 cytosine-specific DNA methylase AMBLS11_RS00390 PF01381 Helix-turn-helix AMBLS11_RS00395 PF03852 DNA mismatch endonuclease Vsr AMBLS11_RS00420 PF00270 DEAD/DEAH box helicase AMBLS11_RS00420 PF17757 UvrB interaction domain AMBLS11_RS00420 PF03461 TRCF domain AMBLS11_RS00420 PF00271 Helicase conserved C-terminal domain AMBLS11_RS00420 PF02559 CarD-like/TRCF domain AMBLS11_RS00425 PF17757 UvrB interaction domain AMBLS11_RS00425 PF04851 Type III restriction enzyme, res subunit AMBLS11_RS00425 PF00271 Helicase conserved C-terminal domain AMBLS11_RS00425 PF02151 UvrB/uvrC motif AMBLS11_RS00425 PF12344 Ultra-violet resistance protein B AMBLS11_RS00435 PF13533 Biotin-lipoyl like AMBLS11_RS00440 PF00005 ABC transporter AMBLS11_RS00450 PF00593 TonB dependent receptor AMBLS11_RS00450 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS00460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS00460 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS00460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS00465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS00465 PF03466 LysR substrate binding domain AMBLS11_RS00470 PF00753 Metallo-beta-lactamase superfamily AMBLS11_RS00475 PF04317 YcjX-like family, DUF463 AMBLS11_RS00490 PF04055 Radical SAM superfamily AMBLS11_RS00490 PF06968 Biotin and Thiamin Synthesis associated domain AMBLS11_RS00495 PF05690 Thiazole biosynthesis protein ThiG AMBLS11_RS00505 PF00899 ThiF family AMBLS11_RS00510 PF02581 Thiamine monophosphate synthase AMBLS11_RS00515 PF13667 ThiC-associated domain AMBLS11_RS00515 PF01964 Radical SAM ThiC family AMBLS11_RS00520 PF07219 HemY protein N-terminus AMBLS11_RS00520 PF07719 Tetratricopeptide repeat AMBLS11_RS00525 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AMBLS11_RS00530 PF02602 Uroporphyrinogen-III synthase HemD AMBLS11_RS00535 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMBLS11_RS00535 PF03900 Porphobilinogen deaminase, C-terminal domain AMBLS11_RS00540 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00540 PF00072 Response regulator receiver domain AMBLS11_RS00550 PF00625 Guanylate kinase AMBLS11_RS00555 PF01192 RNA polymerase Rpb6 AMBLS11_RS00560 PF02824 TGS domain AMBLS11_RS00560 PF04607 Region found in RelA / SpoT proteins AMBLS11_RS00560 PF13291 ACT domain AMBLS11_RS00565 PF01042 Endoribonuclease L-PSP AMBLS11_RS00570 PF12105 SpoU, rRNA methylase, C-terminal AMBLS11_RS00570 PF00588 SpoU rRNA Methylase family AMBLS11_RS00575 PF17191 RecG wedge domain AMBLS11_RS00575 PF00271 Helicase conserved C-terminal domain AMBLS11_RS00575 PF00270 DEAD/DEAH box helicase AMBLS11_RS00580 PF04445 Putative SAM-dependent methyltransferase AMBLS11_RS00585 PF08534 Redoxin AMBLS11_RS00600 PF00528 Binding-protein-dependent transport system inner membrane component AMBLS11_RS00605 PF00005 ABC transporter AMBLS11_RS00605 PF08402 TOBE domain AMBLS11_RS00610 PF00563 EAL domain AMBLS11_RS00610 PF13188 PAS domain AMBLS11_RS00610 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS00610 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00630 PF00924 Mechanosensitive ion channel AMBLS11_RS00630 PF12795 Mechanosensitive ion channel porin domain AMBLS11_RS00630 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMBLS11_RS00645 PF04940 Sensors of blue-light using FAD AMBLS11_RS00645 PF00563 EAL domain AMBLS11_RS00650 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00655 PF03466 LysR substrate binding domain AMBLS11_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS00660 PF01810 LysE type translocator AMBLS11_RS00665 PF00893 Small Multidrug Resistance protein AMBLS11_RS00680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS00680 PF00529 HlyD membrane-fusion protein of T1SS AMBLS11_RS00685 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS00695 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AMBLS11_RS00695 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AMBLS11_RS00700 PF00850 Histone deacetylase domain AMBLS11_RS00705 PF00462 Glutaredoxin AMBLS11_RS00715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS00715 PF00672 HAMP domain AMBLS11_RS00715 PF12729 Four helix bundle sensory module for signal transduction AMBLS11_RS00725 PF11737 Protein of unknown function (DUF3300) AMBLS11_RS00730 PF00925 GTP cyclohydrolase II AMBLS11_RS00735 PF08448 PAS fold AMBLS11_RS00735 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00735 PF00563 EAL domain AMBLS11_RS00750 PF09382 RQC domain AMBLS11_RS00750 PF00271 Helicase conserved C-terminal domain AMBLS11_RS00750 PF16124 RecQ zinc-binding AMBLS11_RS00750 PF00270 DEAD/DEAH box helicase AMBLS11_RS00750 PF00570 HRDC domain AMBLS11_RS00755 PF03061 Thioesterase superfamily AMBLS11_RS00760 PF00571 CBS domain AMBLS11_RS00760 PF01769 Divalent cation transporter AMBLS11_RS00760 PF03448 MgtE intracellular N domain AMBLS11_RS00765 PF00892 EamA-like transporter family AMBLS11_RS00770 PF08448 PAS fold AMBLS11_RS00770 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00775 PF13361 UvrD-like helicase C-terminal domain AMBLS11_RS00775 PF00580 UvrD/REP helicase N-terminal domain AMBLS11_RS00780 PF06426 Serine acetyltransferase, N-terminal AMBLS11_RS00780 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS00785 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS00790 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS00795 PF02899 Phage integrase, N-terminal SAM-like domain AMBLS11_RS00795 PF00589 Phage integrase family AMBLS11_RS00805 PF01678 Diaminopimelate epimerase AMBLS11_RS00810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMBLS11_RS00810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMBLS11_RS00825 PF01569 PAP2 superfamily AMBLS11_RS00830 PF03737 Aldolase/RraA AMBLS11_RS00840 PF02441 Flavoprotein AMBLS11_RS00845 PF08245 Mur ligase middle domain AMBLS11_RS00845 PF01225 Mur ligase family, catalytic domain AMBLS11_RS00845 PF02875 Mur ligase family, glutamate ligase domain AMBLS11_RS00850 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMBLS11_RS00855 PF00719 Inorganic pyrophosphatase AMBLS11_RS00865 PF00701 Dihydrodipicolinate synthetase family AMBLS11_RS00900 PF17760 UvrA interaction domain AMBLS11_RS00900 PF17755 UvrA DNA-binding domain AMBLS11_RS00900 PF00005 ABC transporter AMBLS11_RS00905 PF07690 Major Facilitator Superfamily AMBLS11_RS00910 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS00925 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS00930 PF01263 Aldose 1-epimerase AMBLS11_RS00935 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AMBLS11_RS00935 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AMBLS11_RS00940 PF08544 GHMP kinases C terminal AMBLS11_RS00940 PF00288 GHMP kinases N terminal domain AMBLS11_RS00940 PF10509 Galactokinase galactose-binding signature AMBLS11_RS00945 PF00474 Sodium:solute symporter family AMBLS11_RS00950 PF00436 Single-strand binding protein family AMBLS11_RS00965 PF16363 GDP-mannose 4,6 dehydratase AMBLS11_RS00970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMBLS11_RS00970 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMBLS11_RS00970 PF16355 Domain of unknown function (DUF4982) AMBLS11_RS00970 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMBLS11_RS00970 PF00703 Glycosyl hydrolases family 2 AMBLS11_RS00980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMBLS11_RS00980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMBLS11_RS00985 PF08220 DeoR-like helix-turn-helix domain AMBLS11_RS00985 PF00455 DeoR C terminal sensor domain AMBLS11_RS00990 PF01266 FAD dependent oxidoreductase AMBLS11_RS00990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AMBLS11_RS01005 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS01015 PF04085 rod shape-determining protein MreC AMBLS11_RS01020 PF04093 rod shape-determining protein MreD AMBLS11_RS01025 PF02545 Maf-like protein AMBLS11_RS01030 PF00575 S1 RNA binding domain AMBLS11_RS01030 PF10150 Ribonuclease E/G family AMBLS11_RS01040 PF00795 Carbon-nitrogen hydrolase AMBLS11_RS01045 PF01523 Putative modulator of DNA gyrase AMBLS11_RS01055 PF04751 Protein of unknown function (DUF615) AMBLS11_RS01060 PF01523 Putative modulator of DNA gyrase AMBLS11_RS01070 PF02837 Glycosyl hydrolases family 2, sugar binding domain AMBLS11_RS01070 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMBLS11_RS01070 PF00703 Glycosyl hydrolases family 2 AMBLS11_RS01070 PF16353 Domain of unknown function(DUF4981) AMBLS11_RS01070 PF02929 Beta galactosidase small chain AMBLS11_RS01075 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS01075 PF00072 Response regulator receiver domain AMBLS11_RS01080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS01080 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBLS11_RS01080 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS01085 PF08323 Starch synthase catalytic domain AMBLS11_RS01085 PF00534 Glycosyl transferases group 1 AMBLS11_RS01090 PF08468 Methyltransferase small domain N-terminal AMBLS11_RS01090 PF05175 Methyltransferase small domain AMBLS11_RS01095 PF02390 Putative methyltransferase AMBLS11_RS01105 PF00633 Helix-hairpin-helix motif AMBLS11_RS01105 PF00730 HhH-GPD superfamily base excision DNA repair protein AMBLS11_RS01105 PF14815 NUDIX domain AMBLS11_RS01110 PF04362 Bacterial Fe(2+) trafficking AMBLS11_RS01140 PF02796 Helix-turn-helix domain of resolvase AMBLS11_RS01140 PF00239 Resolvase, N terminal domain AMBLS11_RS01210 PF00551 Formyl transferase AMBLS11_RS01210 PF02911 Formyl transferase, C-terminal domain AMBLS11_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS01220 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS01220 PF00672 HAMP domain AMBLS11_RS01225 PF00072 Response regulator receiver domain AMBLS11_RS01225 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS01245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS01250 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS01260 PF00970 Oxidoreductase FAD-binding domain AMBLS11_RS01260 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS01260 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS01300 PF08031 Berberine and berberine like AMBLS11_RS01300 PF01565 FAD binding domain AMBLS11_RS01335 PF00970 Oxidoreductase FAD-binding domain AMBLS11_RS01335 PF00042 Globin AMBLS11_RS01335 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS01355 PF01750 Hydrogenase maturation protease AMBLS11_RS01365 PF09278 MerR, DNA binding AMBLS11_RS01365 PF00376 MerR family regulatory protein AMBLS11_RS01370 PF00403 Heavy-metal-associated domain AMBLS11_RS01430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS01430 PF00529 HlyD membrane-fusion protein of T1SS AMBLS11_RS01435 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS01440 PF16916 Dimerisation domain of Zinc Transporter AMBLS11_RS01440 PF01545 Cation efflux family AMBLS11_RS01450 PF13520 Amino acid permease AMBLS11_RS01460 PF07731 Multicopper oxidase AMBLS11_RS01460 PF00394 Multicopper oxidase AMBLS11_RS01460 PF07732 Multicopper oxidase AMBLS11_RS01495 PF00672 HAMP domain AMBLS11_RS01495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS01495 PF17200 Single Cache domain 2 AMBLS11_RS01500 PF00072 Response regulator receiver domain AMBLS11_RS01505 PF09078 CheY binding AMBLS11_RS01505 PF01584 CheW-like domain AMBLS11_RS01505 PF02895 Signal transducing histidine kinase, homodimeric domain AMBLS11_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS01505 PF01627 Hpt domain AMBLS11_RS01510 PF01584 CheW-like domain AMBLS11_RS01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS01515 PF13426 PAS domain AMBLS11_RS01515 PF08447 PAS fold AMBLS11_RS01520 PF03705 CheR methyltransferase, all-alpha domain AMBLS11_RS01520 PF01739 CheR methyltransferase, SAM binding domain AMBLS11_RS01525 PF03975 CheD chemotactic sensory transduction AMBLS11_RS01530 PF00072 Response regulator receiver domain AMBLS11_RS01530 PF01339 CheB methylesterase AMBLS11_RS01535 PF17200 Single Cache domain 2 AMBLS11_RS01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS01535 PF00672 HAMP domain AMBLS11_RS01540 PF00072 Response regulator receiver domain AMBLS11_RS01545 PF01627 Hpt domain AMBLS11_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS01545 PF01584 CheW-like domain AMBLS11_RS01545 PF02895 Signal transducing histidine kinase, homodimeric domain AMBLS11_RS01545 PF09078 CheY binding AMBLS11_RS01550 PF01584 CheW-like domain AMBLS11_RS01555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS01555 PF08447 PAS fold AMBLS11_RS01555 PF13426 PAS domain AMBLS11_RS01560 PF13426 PAS domain AMBLS11_RS01560 PF08447 PAS fold AMBLS11_RS01560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS01565 PF01739 CheR methyltransferase, SAM binding domain AMBLS11_RS01565 PF03705 CheR methyltransferase, all-alpha domain AMBLS11_RS01570 PF03975 CheD chemotactic sensory transduction AMBLS11_RS01575 PF01339 CheB methylesterase AMBLS11_RS01575 PF00072 Response regulator receiver domain AMBLS11_RS01585 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS01595 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS01595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AMBLS11_RS01605 PF01204 Trehalase AMBLS11_RS01620 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS01625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS01625 PF00072 Response regulator receiver domain AMBLS11_RS01625 PF09308 LuxQ, periplasmic AMBLS11_RS01625 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS01640 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS01645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBLS11_RS01645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBLS11_RS01655 PF03825 Nucleoside H+ symporter AMBLS11_RS01660 PF01261 Xylose isomerase-like TIM barrel AMBLS11_RS01665 PF05199 GMC oxidoreductase AMBLS11_RS01665 PF00732 GMC oxidoreductase AMBLS11_RS01680 PF00465 Iron-containing alcohol dehydrogenase AMBLS11_RS01715 PF01063 Amino-transferase class IV AMBLS11_RS01720 PF00300 Histidine phosphatase superfamily (branch 1) AMBLS11_RS01730 PF00330 Aconitase family (aconitate hydratase) AMBLS11_RS01730 PF00694 Aconitase C-terminal domain AMBLS11_RS01735 PF00437 Type II/IV secretion system protein AMBLS11_RS01735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMBLS11_RS01740 PF00338 Ribosomal protein S10p/S20e AMBLS11_RS01745 PF00297 Ribosomal protein L3 AMBLS11_RS01750 PF00573 Ribosomal protein L4/L1 family AMBLS11_RS01755 PF00276 Ribosomal protein L23 AMBLS11_RS01760 PF00181 Ribosomal Proteins L2, RNA binding domain AMBLS11_RS01760 PF03947 Ribosomal Proteins L2, C-terminal domain AMBLS11_RS01765 PF00203 Ribosomal protein S19 AMBLS11_RS01770 PF00237 Ribosomal protein L22p/L17e AMBLS11_RS01775 PF00189 Ribosomal protein S3, C-terminal domain AMBLS11_RS01775 PF07650 KH domain AMBLS11_RS01780 PF00252 Ribosomal protein L16p/L10e AMBLS11_RS01785 PF00831 Ribosomal L29 protein AMBLS11_RS01790 PF00366 Ribosomal protein S17 AMBLS11_RS01800 PF00534 Glycosyl transferases group 1 AMBLS11_RS01800 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMBLS11_RS01820 PF02743 Cache domain AMBLS11_RS01820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS01820 PF00672 HAMP domain AMBLS11_RS01825 PF01432 Peptidase family M3 AMBLS11_RS01840 PF01842 ACT domain AMBLS11_RS01840 PF00551 Formyl transferase AMBLS11_RS01850 PF00270 DEAD/DEAH box helicase AMBLS11_RS01850 PF00271 Helicase conserved C-terminal domain AMBLS11_RS01850 PF08482 ATP-dependent helicase C-terminal AMBLS11_RS01850 PF04408 Helicase associated domain (HA2) AMBLS11_RS01855 PF13406 Transglycosylase SLT domain AMBLS11_RS01860 PF00912 Transglycosylase AMBLS11_RS01860 PF14814 Bifunctional transglycosylase second domain AMBLS11_RS01860 PF00905 Penicillin binding protein transpeptidase domain AMBLS11_RS01870 PF05661 Protein of unknown function (DUF808) AMBLS11_RS01880 PF12833 Helix-turn-helix domain AMBLS11_RS01890 PF00543 Nitrogen regulatory protein P-II AMBLS11_RS01895 PF00909 Ammonium Transporter Family AMBLS11_RS01905 PF04261 Dyp-type peroxidase family AMBLS11_RS01910 PF00202 Aminotransferase class-III AMBLS11_RS01915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMBLS11_RS01915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMBLS11_RS01930 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS01940 PF00072 Response regulator receiver domain AMBLS11_RS01940 PF01627 Hpt domain AMBLS11_RS01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS01940 PF00672 HAMP domain AMBLS11_RS01940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS01940 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS01945 PF00521 DNA gyrase/topoisomerase IV, subunit A AMBLS11_RS01945 PF03989 DNA gyrase C-terminal domain, beta-propeller AMBLS11_RS01955 PF00563 EAL domain AMBLS11_RS01955 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS01955 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS01955 PF13188 PAS domain AMBLS11_RS01965 PF00171 Aldehyde dehydrogenase family AMBLS11_RS01970 PF04958 Arginine N-succinyltransferase beta subunit AMBLS11_RS01975 PF00202 Aminotransferase class-III AMBLS11_RS01985 PF00117 Glutamine amidotransferase class-I AMBLS11_RS01990 PF00579 tRNA synthetases class I (W and Y) AMBLS11_RS01995 PF00834 Ribulose-phosphate 3 epimerase family AMBLS11_RS02015 PF02086 D12 class N6 adenine-specific DNA methyltransferase AMBLS11_RS02025 PF01761 3-dehydroquinate synthase AMBLS11_RS02030 PF01202 Shikimate kinase AMBLS11_RS02035 PF07660 Secretin and TonB N terminus short domain AMBLS11_RS02035 PF03958 Bacterial type II/III secretion system short domain AMBLS11_RS02035 PF11741 AMIN domain AMBLS11_RS02035 PF00263 Bacterial type II and III secretion system protein AMBLS11_RS02045 PF04350 Pilus assembly protein, PilO AMBLS11_RS02050 PF05137 Fimbrial assembly protein (PilN) AMBLS11_RS02055 PF11104 Type IV pilus assembly protein PilM; AMBLS11_RS02060 PF00905 Penicillin binding protein transpeptidase domain AMBLS11_RS02060 PF17092 Penicillin-binding protein OB-like domain AMBLS11_RS02060 PF00912 Transglycosylase AMBLS11_RS02065 PF03949 Malic enzyme, NAD binding domain AMBLS11_RS02065 PF00390 Malic enzyme, N-terminal domain AMBLS11_RS02075 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS02085 PF06628 Catalase-related immune-responsive AMBLS11_RS02085 PF00199 Catalase AMBLS11_RS02100 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS02100 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS02100 PF00563 EAL domain AMBLS11_RS02105 PF00696 Amino acid kinase family AMBLS11_RS02105 PF00583 Acetyltransferase (GNAT) family AMBLS11_RS02110 PF00206 Lyase AMBLS11_RS02110 PF14698 Argininosuccinate lyase C-terminal AMBLS11_RS02115 PF00764 Arginosuccinate synthase AMBLS11_RS02120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMBLS11_RS02120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMBLS11_RS02125 PF00696 Amino acid kinase family AMBLS11_RS02130 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMBLS11_RS02130 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_RS02135 PF02142 MGS-like domain AMBLS11_RS02145 PF00072 Response regulator receiver domain AMBLS11_RS02145 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS02150 PF16527 Two-component sensor protein CpxA, periplasmic domain AMBLS11_RS02150 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS02150 PF00672 HAMP domain AMBLS11_RS02155 PF12146 Serine aminopeptidase, S33 AMBLS11_RS02160 PF00588 SpoU rRNA Methylase family AMBLS11_RS02165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS02170 PF12704 MacB-like periplasmic core domain AMBLS11_RS02170 PF02687 FtsX-like permease family AMBLS11_RS02170 PF00005 ABC transporter AMBLS11_RS02175 PF02321 Outer membrane efflux protein AMBLS11_RS02180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMBLS11_RS02180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMBLS11_RS02185 PF02556 Preprotein translocase subunit SecB AMBLS11_RS02190 PF00462 Glutaredoxin AMBLS11_RS02195 PF00581 Rhodanese-like domain AMBLS11_RS02200 PF01551 Peptidase family M23 AMBLS11_RS02205 PF04748 Divergent polysaccharide deacetylase AMBLS11_RS02215 PF03009 Glycerophosphoryl diester phosphodiesterase family AMBLS11_RS02225 PF02666 Phosphatidylserine decarboxylase AMBLS11_RS02230 PF03193 RsgA GTPase AMBLS11_RS02235 PF00929 Exonuclease AMBLS11_RS02255 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS02255 PF00593 TonB dependent receptor AMBLS11_RS02265 PF13333 Integrase core domain AMBLS11_RS02265 PF00665 Integrase core domain AMBLS11_RS02265 PF13276 HTH-like domain AMBLS11_RS02270 PF13181 Tetratricopeptide repeat AMBLS11_RS02285 PF00205 Thiamine pyrophosphate enzyme, central domain AMBLS11_RS02285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMBLS11_RS02285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMBLS11_RS02290 PF10369 Small subunit of acetolactate synthase AMBLS11_RS02300 PF02416 mttA/Hcf106 family AMBLS11_RS02305 PF02416 mttA/Hcf106 family AMBLS11_RS02310 PF00902 Sec-independent protein translocase protein (TatC) AMBLS11_RS02320 PF01026 TatD related DNase AMBLS11_RS02325 PF00563 EAL domain AMBLS11_RS02325 PF01590 GAF domain AMBLS11_RS02325 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS02325 PF00360 Phytochrome region AMBLS11_RS02330 PF00490 Delta-aminolevulinic acid dehydratase AMBLS11_RS02335 PF02541 Ppx/GppA phosphatase family AMBLS11_RS02340 PF00270 DEAD/DEAH box helicase AMBLS11_RS02340 PF00271 Helicase conserved C-terminal domain AMBLS11_RS02345 PF00085 Thioredoxin AMBLS11_RS02350 PF07497 Rho termination factor, RNA-binding domain AMBLS11_RS02350 PF07498 Rho termination factor, N-terminal domain AMBLS11_RS02350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMBLS11_RS02355 PF01546 Peptidase family M20/M25/M40 AMBLS11_RS02355 PF07687 Peptidase dimerisation domain AMBLS11_RS02360 PF00072 Response regulator receiver domain AMBLS11_RS02360 PF09308 LuxQ, periplasmic AMBLS11_RS02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS02360 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS02365 PF06965 Na+/H+ antiporter 1 AMBLS11_RS02370 PF00731 AIR carboxylase AMBLS11_RS02375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMBLS11_RS02375 PF02222 ATP-grasp domain AMBLS11_RS02390 PF00210 Ferritin-like domain AMBLS11_RS02395 PF07995 Glucose / Sorbosone dehydrogenase AMBLS11_RS02400 PF07676 WD40-like Beta Propeller Repeat AMBLS11_RS02400 PF00326 Prolyl oligopeptidase family AMBLS11_RS02410 PF00085 Thioredoxin AMBLS11_RS02425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AMBLS11_RS02430 PF00709 Adenylosuccinate synthetase AMBLS11_RS02435 PF00171 Aldehyde dehydrogenase family AMBLS11_RS02460 PF03553 Na+/H+ antiporter family AMBLS11_RS02465 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBLS11_RS02475 PF07075 Protein of unknown function (DUF1343) AMBLS11_RS02480 PF01380 SIS domain AMBLS11_RS02485 PF00842 Alanine racemase, C-terminal domain AMBLS11_RS02485 PF01168 Alanine racemase, N-terminal domain AMBLS11_RS02500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBLS11_RS02525 PF00464 Serine hydroxymethyltransferase AMBLS11_RS02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS02530 PF03466 LysR substrate binding domain AMBLS11_RS02535 PF03831 PhnA domain AMBLS11_RS02535 PF08274 PhnA Zinc-Ribbon AMBLS11_RS02540 PF00583 Acetyltransferase (GNAT) family AMBLS11_RS02570 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS02570 PF01548 Transposase AMBLS11_RS02600 PF13495 Phage integrase, N-terminal SAM-like domain AMBLS11_RS02600 PF00589 Phage integrase family AMBLS11_RS02605 PF00108 Thiolase, N-terminal domain AMBLS11_RS02605 PF02803 Thiolase, C-terminal domain AMBLS11_RS02610 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS02610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMBLS11_RS02610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS02615 PF10145 Phage-related minor tail protein AMBLS11_RS02615 PF01551 Peptidase family M23 AMBLS11_RS02615 PF01464 Transglycosylase SLT domain AMBLS11_RS02620 PF00557 Metallopeptidase family M24 AMBLS11_RS02630 PF00348 Polyprenyl synthetase AMBLS11_RS02635 PF00829 Ribosomal prokaryotic L21 protein AMBLS11_RS02640 PF01016 Ribosomal L27 protein AMBLS11_RS02645 PF01926 50S ribosome-binding GTPase AMBLS11_RS02645 PF01018 GTP1/OBG AMBLS11_RS02655 PF00186 Dihydrofolate reductase AMBLS11_RS02660 PF00140 Sigma-70 factor, region 1.2 AMBLS11_RS02660 PF04542 Sigma-70 region 2 AMBLS11_RS02660 PF04545 Sigma-70, region 4 AMBLS11_RS02660 PF04539 Sigma-70 region 3 AMBLS11_RS02665 PF01551 Peptidase family M23 AMBLS11_RS02665 PF01476 LysM domain AMBLS11_RS02670 PF09335 SNARE associated Golgi protein AMBLS11_RS02680 PF01142 tRNA pseudouridine synthase D (TruD) AMBLS11_RS02685 PF02542 YgbB family AMBLS11_RS02690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMBLS11_RS02695 PF04977 Septum formation initiator AMBLS11_RS02705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS02705 PF17200 Single Cache domain 2 AMBLS11_RS02705 PF00672 HAMP domain AMBLS11_RS02710 PF14850 DNA-binding domain of Proline dehydrogenase AMBLS11_RS02710 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMBLS11_RS02710 PF00171 Aldehyde dehydrogenase family AMBLS11_RS02710 PF01619 Proline dehydrogenase AMBLS11_RS02730 PF02976 DNA mismatch repair enzyme MutH AMBLS11_RS02735 PF00293 NUDIX domain AMBLS11_RS02745 PF01925 Sulfite exporter TauE/SafE AMBLS11_RS02750 PF01790 Prolipoprotein diacylglyceryl transferase AMBLS11_RS02755 PF00303 Thymidylate synthase AMBLS11_RS02760 PF01339 CheB methylesterase AMBLS11_RS02760 PF00072 Response regulator receiver domain AMBLS11_RS02765 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS02765 PF05230 MASE2 domain AMBLS11_RS02770 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS02770 PF00672 HAMP domain AMBLS11_RS02770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS02770 PF00072 Response regulator receiver domain AMBLS11_RS02770 PF01627 Hpt domain AMBLS11_RS02775 PF07690 Major Facilitator Superfamily AMBLS11_RS02790 PF00849 RNA pseudouridylate synthase AMBLS11_RS02795 PF18337 RapA N-terminal Tudor like domain AMBLS11_RS02795 PF00271 Helicase conserved C-terminal domain AMBLS11_RS02795 PF18339 RapA N-terminal Tudor like domain 1 AMBLS11_RS02795 PF12137 RNA polymerase recycling family C-terminal AMBLS11_RS02795 PF00176 SNF2 family N-terminal domain AMBLS11_RS02815 PF13638 PIN domain AMBLS11_RS02815 PF02562 PhoH-like protein AMBLS11_RS02825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMBLS11_RS02825 PF10414 Sirohaem synthase dimerisation region AMBLS11_RS02830 PF00271 Helicase conserved C-terminal domain AMBLS11_RS02830 PF12343 Cold shock protein DEAD box A AMBLS11_RS02830 PF00270 DEAD/DEAH box helicase AMBLS11_RS02830 PF03880 DbpA RNA binding domain AMBLS11_RS02845 PF02321 Outer membrane efflux protein AMBLS11_RS02850 PF00293 NUDIX domain AMBLS11_RS02860 PF00149 Calcineurin-like phosphoesterase AMBLS11_RS02865 PF05728 Uncharacterised protein family (UPF0227) AMBLS11_RS02870 PF00986 DNA gyrase B subunit, carboxyl terminus AMBLS11_RS02870 PF01751 Toprim domain AMBLS11_RS02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS02870 PF00204 DNA gyrase B AMBLS11_RS02880 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS02900 PF04055 Radical SAM superfamily AMBLS11_RS02905 PF08207 Elongation factor P (EF-P) KOW-like domain AMBLS11_RS02905 PF01132 Elongation factor P (EF-P) OB domain AMBLS11_RS02905 PF09285 Elongation factor P, C-terminal AMBLS11_RS02910 PF00152 tRNA synthetases class II (D, K and N) AMBLS11_RS02915 PF00593 TonB dependent receptor AMBLS11_RS02915 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS02925 PF13333 Integrase core domain AMBLS11_RS02925 PF13276 HTH-like domain AMBLS11_RS02925 PF00665 Integrase core domain AMBLS11_RS02935 PF13302 Acetyltransferase (GNAT) domain AMBLS11_RS02940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMBLS11_RS02945 PF05175 Methyltransferase small domain AMBLS11_RS02955 PF01722 BolA-like protein AMBLS11_RS02965 PF03861 ANTAR domain AMBLS11_RS02965 PF08376 Nitrate and nitrite sensing AMBLS11_RS02975 PF01740 STAS domain AMBLS11_RS02975 PF00916 Sulfate permease family AMBLS11_RS02980 PF04324 BFD-like [2Fe-2S] binding domain AMBLS11_RS02980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMBLS11_RS02980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMBLS11_RS02980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS02980 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMBLS11_RS02985 PF13806 Rieske-like [2Fe-2S] domain AMBLS11_RS02995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMBLS11_RS02995 PF14824 Sirohaem biosynthesis protein central AMBLS11_RS02995 PF10414 Sirohaem synthase dimerisation region AMBLS11_RS03000 PF02885 Glycosyl transferase family, helical bundle domain AMBLS11_RS03000 PF00591 Glycosyl transferase family, a/b domain AMBLS11_RS03005 PF02872 5'-nucleotidase, C-terminal domain AMBLS11_RS03005 PF00149 Calcineurin-like phosphoesterase AMBLS11_RS03010 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS03010 PF08448 PAS fold AMBLS11_RS03015 PF13426 PAS domain AMBLS11_RS03015 PF08447 PAS fold AMBLS11_RS03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS03020 PF00005 ABC transporter AMBLS11_RS03025 PF00528 Binding-protein-dependent transport system inner membrane component AMBLS11_RS03030 PF00005 ABC transporter AMBLS11_RS03045 PF01323 DSBA-like thioredoxin domain AMBLS11_RS03050 PF00593 TonB dependent receptor AMBLS11_RS03050 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS03055 PF01636 Phosphotransferase enzyme family AMBLS11_RS03060 PF13746 4Fe-4S dicluster domain AMBLS11_RS03060 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMBLS11_RS03060 PF12801 4Fe-4S binding domain AMBLS11_RS03075 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS03075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS03075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS03075 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMBLS11_RS03090 PF13378 Enolase C-terminal domain-like AMBLS11_RS03090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMBLS11_RS03095 PF00596 Class II Aldolase and Adducin N-terminal domain AMBLS11_RS03110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS03115 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS03130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS03130 PF00672 HAMP domain AMBLS11_RS03130 PF02743 Cache domain AMBLS11_RS03135 PF04539 Sigma-70 region 3 AMBLS11_RS03135 PF04545 Sigma-70, region 4 AMBLS11_RS03135 PF00140 Sigma-70 factor, region 1.2 AMBLS11_RS03135 PF03979 Sigma-70 factor, region 1.1 AMBLS11_RS03135 PF04546 Sigma-70, non-essential region AMBLS11_RS03135 PF04542 Sigma-70 region 2 AMBLS11_RS03140 PF08278 DNA primase DnaG DnaB-binding AMBLS11_RS03140 PF08275 DNA primase catalytic core, N-terminal domain AMBLS11_RS03140 PF01807 CHC2 zinc finger AMBLS11_RS03140 PF10410 DnaB-helicase binding domain of primase AMBLS11_RS03150 PF01165 Ribosomal protein S21 AMBLS11_RS03155 PF00814 Glycoprotease family AMBLS11_RS03165 PF02660 Glycerol-3-phosphate acyltransferase AMBLS11_RS03170 PF02152 Dihydroneopterin aldolase AMBLS11_RS03180 PF02673 Bacitracin resistance protein BacA AMBLS11_RS03185 PF01230 HIT domain AMBLS11_RS03200 PF03594 Benzoate membrane transport protein AMBLS11_RS03205 PF01381 Helix-turn-helix AMBLS11_RS03205 PF07883 Cupin domain AMBLS11_RS03210 PF04381 Putative exonuclease, RdgC AMBLS11_RS03215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBLS11_RS03215 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03220 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS03220 PF00072 Response regulator receiver domain AMBLS11_RS03225 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03225 PF00989 PAS fold AMBLS11_RS03225 PF11808 Phosphate regulon sensor protein PhoR AMBLS11_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03230 PF12849 PBP superfamily domain AMBLS11_RS03255 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS03260 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS03265 PF02472 Biopolymer transport protein ExbD/TolR AMBLS11_RS03270 PF03544 Gram-negative bacterial TonB protein C-terminal AMBLS11_RS03280 PF00072 Response regulator receiver domain AMBLS11_RS03285 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03285 PF01627 Hpt domain AMBLS11_RS03285 PF00072 Response regulator receiver domain AMBLS11_RS03285 PF00672 HAMP domain AMBLS11_RS03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS03295 PF00501 AMP-binding enzyme AMBLS11_RS03295 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS03305 PF07995 Glucose / Sorbosone dehydrogenase AMBLS11_RS03310 PF00330 Aconitase family (aconitate hydratase) AMBLS11_RS03310 PF06434 Aconitate hydratase 2 N-terminus AMBLS11_RS03310 PF11791 Aconitate B N-terminal domain AMBLS11_RS03320 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03320 PF00672 HAMP domain AMBLS11_RS03320 PF17149 Periplasmic sensor domain found in signal transduction proteins AMBLS11_RS03320 PF01627 Hpt domain AMBLS11_RS03320 PF00072 Response regulator receiver domain AMBLS11_RS03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03340 PF11791 Aconitate B N-terminal domain AMBLS11_RS03340 PF00330 Aconitase family (aconitate hydratase) AMBLS11_RS03340 PF06434 Aconitate hydratase 2 N-terminus AMBLS11_RS03350 PF00696 Amino acid kinase family AMBLS11_RS03350 PF01842 ACT domain AMBLS11_RS03355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS03355 PF00672 HAMP domain AMBLS11_RS03360 PF00149 Calcineurin-like phosphoesterase AMBLS11_RS03365 PF04379 ApaG domain AMBLS11_RS03370 PF00398 Ribosomal RNA adenine dimethylase AMBLS11_RS03375 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMBLS11_RS03380 PF09312 SurA N-terminal domain AMBLS11_RS03380 PF00639 PPIC-type PPIASE domain AMBLS11_RS03385 PF04453 LPS transport system D AMBLS11_RS03385 PF03968 OstA-like protein AMBLS11_RS03390 PF00226 DnaJ domain AMBLS11_RS03390 PF05099 Tellurite resistance protein TerB AMBLS11_RS03395 PF02899 Phage integrase, N-terminal SAM-like domain AMBLS11_RS03395 PF00589 Phage integrase family AMBLS11_RS03400 PF10411 Disulfide bond isomerase protein N-terminus AMBLS11_RS03400 PF13098 Thioredoxin-like domain AMBLS11_RS03405 PF01368 DHH family AMBLS11_RS03405 PF02272 DHHA1 domain AMBLS11_RS03405 PF17768 RecJ OB domain AMBLS11_RS03415 PF11967 Recombination protein O N terminal AMBLS11_RS03415 PF02565 Recombination protein O C terminal AMBLS11_RS03420 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMBLS11_RS03425 PF01648 4'-phosphopantetheinyl transferase superfamily AMBLS11_RS03430 PF05958 tRNA (Uracil-5-)-methyltransferase AMBLS11_RS03435 PF02824 TGS domain AMBLS11_RS03435 PF13291 ACT domain AMBLS11_RS03435 PF04607 Region found in RelA / SpoT proteins AMBLS11_RS03440 PF03819 MazG nucleotide pyrophosphohydrolase domain AMBLS11_RS03475 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS03475 PF00501 AMP-binding enzyme AMBLS11_RS03485 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMBLS11_RS03495 PF00535 Glycosyl transferase family 2 AMBLS11_RS03515 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03515 PF08521 Two-component sensor kinase N-terminal AMBLS11_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03520 PF00072 Response regulator receiver domain AMBLS11_RS03520 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS03530 PF00572 Ribosomal protein L13 AMBLS11_RS03535 PF00380 Ribosomal protein S9/S16 AMBLS11_RS03540 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMBLS11_RS03540 PF00355 Rieske [2Fe-2S] domain AMBLS11_RS03545 PF00033 Cytochrome b/b6/petB AMBLS11_RS03545 PF00032 Cytochrome b(C-terminal)/b6/petD AMBLS11_RS03550 PF02167 Cytochrome C1 family AMBLS11_RS03555 PF00043 Glutathione S-transferase, C-terminal domain AMBLS11_RS03555 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS03560 PF04386 Stringent starvation protein B AMBLS11_RS03575 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS03575 PF00072 Response regulator receiver domain AMBLS11_RS03580 PF01769 Divalent cation transporter AMBLS11_RS03580 PF00571 CBS domain AMBLS11_RS03580 PF03448 MgtE intracellular N domain AMBLS11_RS03585 PF00381 PTS HPr component phosphorylation site AMBLS11_RS03590 PF03668 P-loop ATPase protein family AMBLS11_RS03595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMBLS11_RS03600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMBLS11_RS03605 PF04963 Sigma-54 factor, core binding domain AMBLS11_RS03605 PF04552 Sigma-54, DNA binding domain AMBLS11_RS03605 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMBLS11_RS03610 PF00005 ABC transporter AMBLS11_RS03610 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMBLS11_RS03615 PF03968 OstA-like protein AMBLS11_RS03630 PF00571 CBS domain AMBLS11_RS03630 PF01380 SIS domain AMBLS11_RS03635 PF01699 Sodium/calcium exchanger protein AMBLS11_RS03640 PF00005 ABC transporter AMBLS11_RS03645 PF02405 Permease MlaE AMBLS11_RS03650 PF02470 MlaD protein AMBLS11_RS03655 PF05494 MlaC protein AMBLS11_RS03665 PF01722 BolA-like protein AMBLS11_RS03670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMBLS11_RS03675 PF13180 PDZ domain AMBLS11_RS03680 PF13180 PDZ domain AMBLS11_RS03680 PF00595 PDZ domain AMBLS11_RS03690 PF03969 AFG1-like ATPase AMBLS11_RS03695 PF01709 Transcriptional regulator AMBLS11_RS03700 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS03700 PF01548 Transposase AMBLS11_RS03710 PF14403 Circularly permuted ATP-grasp type 2 AMBLS11_RS03715 PF08379 Bacterial transglutaminase-like N-terminal region AMBLS11_RS03715 PF01841 Transglutaminase-like superfamily AMBLS11_RS03720 PF04168 A predicted alpha-helical domain with a conserved ER motif. AMBLS11_RS03720 PF14403 Circularly permuted ATP-grasp type 2 AMBLS11_RS03735 PF02355 Protein export membrane protein AMBLS11_RS03735 PF07549 SecD/SecF GG Motif AMBLS11_RS03735 PF02355 Protein export membrane protein AMBLS11_RS03735 PF07549 SecD/SecF GG Motif AMBLS11_RS03740 PF03471 Transporter associated domain AMBLS11_RS03740 PF00999 Sodium/hydrogen exchanger family AMBLS11_RS03740 PF02080 TrkA-C domain AMBLS11_RS03745 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS03745 PF00593 TonB dependent receptor AMBLS11_RS03750 PF00892 EamA-like transporter family AMBLS11_RS03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03760 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03760 PF09308 LuxQ, periplasmic AMBLS11_RS03760 PF00072 Response regulator receiver domain AMBLS11_RS03765 PF13458 Periplasmic binding protein AMBLS11_RS03780 PF02772 S-adenosylmethionine synthetase, central domain AMBLS11_RS03780 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMBLS11_RS03780 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMBLS11_RS03785 PF02779 Transketolase, pyrimidine binding domain AMBLS11_RS03785 PF00456 Transketolase, thiamine diphosphate binding domain AMBLS11_RS03785 PF02780 Transketolase, C-terminal domain AMBLS11_RS03790 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_RS03790 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMBLS11_RS03795 PF00162 Phosphoglycerate kinase AMBLS11_RS03800 PF00274 Fructose-bisphosphate aldolase class-I AMBLS11_RS03805 PF01219 Prokaryotic diacylglycerol kinase AMBLS11_RS03810 PF00884 Sulfatase AMBLS11_RS03810 PF08019 Phosphoethanolamine transferase EptA/EptB AMBLS11_RS03815 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS03815 PF00072 Response regulator receiver domain AMBLS11_RS03820 PF00672 HAMP domain AMBLS11_RS03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS03820 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS03830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS03830 PF00529 HlyD membrane-fusion protein of T1SS AMBLS11_RS03835 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS03840 PF02321 Outer membrane efflux protein AMBLS11_RS03850 PF00326 Prolyl oligopeptidase family AMBLS11_RS03850 PF07676 WD40-like Beta Propeller Repeat AMBLS11_RS03855 PF02541 Ppx/GppA phosphatase family AMBLS11_RS03860 PF13090 Polyphosphate kinase C-terminal domain 2 AMBLS11_RS03860 PF02503 Polyphosphate kinase middle domain AMBLS11_RS03860 PF13089 Polyphosphate kinase N-terminal domain AMBLS11_RS03860 PF17941 Polyphosphate kinase C-terminal domain 1 AMBLS11_RS03870 PF00528 Binding-protein-dependent transport system inner membrane component AMBLS11_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component AMBLS11_RS03880 PF00005 ABC transporter AMBLS11_RS03885 PF01895 PhoU domain AMBLS11_RS03890 PF01384 Phosphate transporter family AMBLS11_RS03900 PF03466 LysR substrate binding domain AMBLS11_RS03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS03925 PF03006 Haemolysin-III related AMBLS11_RS03930 PF01047 MarR family AMBLS11_RS03935 PF02566 OsmC-like protein AMBLS11_RS03940 PF01433 Peptidase family M1 domain AMBLS11_RS03950 PF01205 Uncharacterized protein family UPF0029 AMBLS11_RS03950 PF09186 Domain of unknown function (DUF1949) AMBLS11_RS03955 PF04397 LytTr DNA-binding domain AMBLS11_RS03955 PF00072 Response regulator receiver domain AMBLS11_RS03970 PF08447 PAS fold AMBLS11_RS03970 PF13426 PAS domain AMBLS11_RS03970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS03980 PF12320 Type 5 capsule protein repressor C-terminal domain AMBLS11_RS03980 PF00149 Calcineurin-like phosphoesterase AMBLS11_RS03985 PF13476 AAA domain AMBLS11_RS03995 PF00375 Sodium:dicarboxylate symporter family AMBLS11_RS04000 PF00491 Arginase family AMBLS11_RS04005 PF01979 Amidohydrolase family AMBLS11_RS04010 PF00392 Bacterial regulatory proteins, gntR family AMBLS11_RS04010 PF07702 UTRA domain AMBLS11_RS04015 PF01175 Urocanase Rossmann-like domain AMBLS11_RS04015 PF17391 Urocanase N-terminal domain AMBLS11_RS04015 PF17392 Urocanase C-terminal domain AMBLS11_RS04020 PF00221 Aromatic amino acid lyase AMBLS11_RS04030 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMBLS11_RS04035 PF01979 Amidohydrolase family AMBLS11_RS04045 PF12848 ABC transporter AMBLS11_RS04045 PF00005 ABC transporter AMBLS11_RS04070 PF00924 Mechanosensitive ion channel AMBLS11_RS04075 PF00544 Pectate lyase AMBLS11_RS04085 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS04085 PF02743 Cache domain AMBLS11_RS04090 PF00158 Sigma-54 interaction domain AMBLS11_RS04090 PF00072 Response regulator receiver domain AMBLS11_RS04090 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS04095 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS04095 PF00593 TonB dependent receptor AMBLS11_RS04105 PF00939 Sodium:sulfate symporter transmembrane region AMBLS11_RS04110 PF03949 Malic enzyme, NAD binding domain AMBLS11_RS04110 PF00390 Malic enzyme, N-terminal domain AMBLS11_RS04135 PF03150 Di-haem cytochrome c peroxidase AMBLS11_RS04165 PF04172 LrgB-like family AMBLS11_RS04170 PF00072 Response regulator receiver domain AMBLS11_RS04195 PF04055 Radical SAM superfamily AMBLS11_RS04195 PF06969 HemN C-terminal domain AMBLS11_RS04200 PF01725 Ham1 family AMBLS11_RS04205 PF00271 Helicase conserved C-terminal domain AMBLS11_RS04205 PF00270 DEAD/DEAH box helicase AMBLS11_RS04215 PF12627 Probable RNA and SrmB- binding site of polymerase A AMBLS11_RS04215 PF01743 Poly A polymerase head domain AMBLS11_RS04220 PF13401 AAA domain AMBLS11_RS04220 PF01471 Putative peptidoglycan binding domain AMBLS11_RS04230 PF13276 HTH-like domain AMBLS11_RS04230 PF13333 Integrase core domain AMBLS11_RS04230 PF00665 Integrase core domain AMBLS11_RS04240 PF11871 Domain of unknown function (DUF3391) AMBLS11_RS04240 PF01966 HD domain AMBLS11_RS04245 PF00694 Aconitase C-terminal domain AMBLS11_RS04250 PF00330 Aconitase family (aconitate hydratase) AMBLS11_RS04255 PF00180 Isocitrate/isopropylmalate dehydrogenase AMBLS11_RS04260 PF08502 LeuA allosteric (dimerisation) domain AMBLS11_RS04260 PF00682 HMGL-like AMBLS11_RS04270 PF00113 Enolase, C-terminal TIM barrel domain AMBLS11_RS04270 PF03952 Enolase, N-terminal domain AMBLS11_RS04275 PF00117 Glutamine amidotransferase class-I AMBLS11_RS04275 PF06418 CTP synthase N-terminus AMBLS11_RS04280 PF05188 MutS domain II AMBLS11_RS04280 PF01624 MutS domain I AMBLS11_RS04280 PF05192 MutS domain III AMBLS11_RS04280 PF00488 MutS domain V AMBLS11_RS04280 PF05190 MutS family domain IV AMBLS11_RS04285 PF02464 Competence-damaged protein AMBLS11_RS04290 PF00154 recA bacterial DNA recombination protein AMBLS11_RS04295 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS04295 PF01548 Transposase AMBLS11_RS04300 PF00005 ABC transporter AMBLS11_RS04305 PF12679 ABC-2 family transporter protein AMBLS11_RS04310 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS04310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS04310 PF00672 HAMP domain AMBLS11_RS04315 PF00072 Response regulator receiver domain AMBLS11_RS04315 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS04350 PF00005 ABC transporter AMBLS11_RS04355 PF03379 CcmB protein AMBLS11_RS04360 PF01578 Cytochrome C assembly protein AMBLS11_RS04365 PF04995 Heme exporter protein D (CcmD) AMBLS11_RS04370 PF03100 CcmE AMBLS11_RS04375 PF01578 Cytochrome C assembly protein AMBLS11_RS04375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMBLS11_RS04380 PF08534 Redoxin AMBLS11_RS04385 PF03918 Cytochrome C biogenesis protein AMBLS11_RS04395 PF04333 MlaA lipoprotein AMBLS11_RS04400 PF16363 GDP-mannose 4,6 dehydratase AMBLS11_RS04410 PF00854 POT family AMBLS11_RS04420 PF00005 ABC transporter AMBLS11_RS04430 PF10531 SLBB domain AMBLS11_RS04430 PF02563 Polysaccharide biosynthesis/export protein AMBLS11_RS04440 PF00953 Glycosyl transferase family 4 AMBLS11_RS04455 PF00483 Nucleotidyl transferase AMBLS11_RS04460 PF10531 SLBB domain AMBLS11_RS04465 PF00180 Isocitrate/isopropylmalate dehydrogenase AMBLS11_RS04465 PF18324 Hypothetical protein TT1725 AMBLS11_RS04480 PF03641 Possible lysine decarboxylase AMBLS11_RS04480 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMBLS11_RS04480 PF11892 Domain of unknown function (DUF3412) AMBLS11_RS04485 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS04490 PF14489 QueF-like protein AMBLS11_RS04490 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMBLS11_RS04495 PF07348 Syd protein (SUKH-2) AMBLS11_RS04515 PF00483 Nucleotidyl transferase AMBLS11_RS04520 PF00011 Hsp20/alpha crystallin family AMBLS11_RS04540 PF00849 RNA pseudouridylate synthase AMBLS11_RS04545 PF00258 Flavodoxin AMBLS11_RS04550 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS04550 PF14602 Hexapeptide repeat of succinyl-transferase AMBLS11_RS04550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMBLS11_RS04555 PF01909 Nucleotidyltransferase domain AMBLS11_RS04555 PF01966 HD domain AMBLS11_RS04555 PF08335 GlnD PII-uridylyltransferase AMBLS11_RS04560 PF00557 Metallopeptidase family M24 AMBLS11_RS04565 PF00318 Ribosomal protein S2 AMBLS11_RS04570 PF00889 Elongation factor TS AMBLS11_RS04575 PF00696 Amino acid kinase family AMBLS11_RS04580 PF01765 Ribosome recycling factor AMBLS11_RS04585 PF01255 Putative undecaprenyl diphosphate synthase AMBLS11_RS04595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMBLS11_RS04595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMBLS11_RS04595 PF13288 DXP reductoisomerase C-terminal domain AMBLS11_RS04600 PF17820 PDZ domain AMBLS11_RS04600 PF02163 Peptidase family M50 AMBLS11_RS04605 PF07244 Surface antigen variable number repeat AMBLS11_RS04605 PF01103 Surface antigen AMBLS11_RS04610 PF03938 Outer membrane protein (OmpH-like) AMBLS11_RS04615 PF07977 FabA-like domain AMBLS11_RS04620 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS04620 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMBLS11_RS04625 PF02684 Lipid-A-disaccharide synthetase AMBLS11_RS04630 PF01351 Ribonuclease HII AMBLS11_RS04635 PF02811 PHP domain AMBLS11_RS04635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMBLS11_RS04635 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMBLS11_RS04635 PF01336 OB-fold nucleic acid binding domain AMBLS11_RS04635 PF14579 Helix-hairpin-helix motif AMBLS11_RS04640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMBLS11_RS04645 PF09179 TilS substrate binding domain AMBLS11_RS04645 PF01171 PP-loop family AMBLS11_RS04645 PF11734 TilS substrate C-terminal domain AMBLS11_RS04650 PF00563 EAL domain AMBLS11_RS04650 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS04650 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS04655 PF02254 TrkA-N domain AMBLS11_RS04655 PF02080 TrkA-C domain AMBLS11_RS04655 PF00999 Sodium/hydrogen exchanger family AMBLS11_RS04665 PF14437 MafB19-like deaminase AMBLS11_RS04670 PF01464 Transglycosylase SLT domain AMBLS11_RS04670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBLS11_RS04675 PF02769 AIR synthase related protein, C-terminal domain AMBLS11_RS04675 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMBLS11_RS04675 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMBLS11_RS04680 PF01713 Smr domain AMBLS11_RS04715 PF00072 Response regulator receiver domain AMBLS11_RS04715 PF01584 CheW-like domain AMBLS11_RS04720 PF01739 CheR methyltransferase, SAM binding domain AMBLS11_RS04720 PF03705 CheR methyltransferase, all-alpha domain AMBLS11_RS04725 PF00460 Flagella basal body rod protein AMBLS11_RS04730 PF00460 Flagella basal body rod protein AMBLS11_RS04730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBLS11_RS04735 PF13860 FlgD Ig-like domain AMBLS11_RS04735 PF13861 FlgD Tudor-like domain AMBLS11_RS04735 PF03963 Flagellar hook capping protein - N-terminal region AMBLS11_RS04740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBLS11_RS04740 PF00460 Flagella basal body rod protein AMBLS11_RS04740 PF07559 Flagellar basal body protein FlaE AMBLS11_RS04745 PF00460 Flagella basal body rod protein AMBLS11_RS04745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBLS11_RS04750 PF00460 Flagella basal body rod protein AMBLS11_RS04750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMBLS11_RS04755 PF02107 Flagellar L-ring protein AMBLS11_RS04760 PF02119 Flagellar P-ring protein AMBLS11_RS04765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMBLS11_RS04765 PF10135 Rod binding protein AMBLS11_RS04785 PF00669 Bacterial flagellin N-terminal helical region AMBLS11_RS04785 PF00700 Bacterial flagellin C-terminal helical region AMBLS11_RS04785 PF07196 Flagellin hook IN motif AMBLS11_RS04790 PF07196 Flagellin hook IN motif AMBLS11_RS04790 PF00700 Bacterial flagellin C-terminal helical region AMBLS11_RS04790 PF00669 Bacterial flagellin N-terminal helical region AMBLS11_RS04795 PF00700 Bacterial flagellin C-terminal helical region AMBLS11_RS04795 PF00669 Bacterial flagellin N-terminal helical region AMBLS11_RS04795 PF07196 Flagellin hook IN motif AMBLS11_RS04800 PF03646 FlaG protein AMBLS11_RS04805 PF07195 Flagellar hook-associated protein 2 C-terminus AMBLS11_RS04805 PF02465 Flagellar hook-associated protein 2 N-terminus AMBLS11_RS04805 PF07196 Flagellin hook IN motif AMBLS11_RS04810 PF02561 Flagellar protein FliS AMBLS11_RS04825 PF00535 Glycosyl transferase family 2 AMBLS11_RS04830 PF00535 Glycosyl transferase family 2 AMBLS11_RS04835 PF01370 NAD dependent epimerase/dehydratase family AMBLS11_RS04850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBLS11_RS04850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBLS11_RS04855 PF02348 Cytidylyltransferase AMBLS11_RS04885 PF01370 NAD dependent epimerase/dehydratase family AMBLS11_RS04890 PF16363 GDP-mannose 4,6 dehydratase AMBLS11_RS04895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMBLS11_RS04900 PF02719 Polysaccharide biosynthesis protein AMBLS11_RS04915 PF04991 LicD family AMBLS11_RS04920 PF08666 SAF domain AMBLS11_RS04920 PF03102 NeuB family AMBLS11_RS04930 PF02348 Cytidylyltransferase AMBLS11_RS04935 PF01467 Cytidylyltransferase-like AMBLS11_RS04940 PF00669 Bacterial flagellin N-terminal helical region AMBLS11_RS04940 PF00700 Bacterial flagellin C-terminal helical region AMBLS11_RS04945 PF06490 Flagellar regulatory protein FleQ AMBLS11_RS04945 PF00158 Sigma-54 interaction domain AMBLS11_RS04945 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS04950 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS04950 PF13188 PAS domain AMBLS11_RS04955 PF00158 Sigma-54 interaction domain AMBLS11_RS04955 PF00072 Response regulator receiver domain AMBLS11_RS04955 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS04960 PF02049 Flagellar hook-basal body complex protein FliE AMBLS11_RS04965 PF01514 Secretory protein of YscJ/FliF family AMBLS11_RS04965 PF08345 Flagellar M-ring protein C-terminal AMBLS11_RS04970 PF14841 FliG middle domain AMBLS11_RS04970 PF01706 FliG C-terminal domain AMBLS11_RS04970 PF14842 FliG N-terminal domain AMBLS11_RS04980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMBLS11_RS04980 PF18269 T3SS EscN ATPase C-terminal domain AMBLS11_RS05000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMBLS11_RS05000 PF02154 Flagellar motor switch protein FliM AMBLS11_RS05005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMBLS11_RS05010 PF04347 Flagellar biosynthesis protein, FliO AMBLS11_RS05015 PF00813 FliP family AMBLS11_RS05020 PF01313 Bacterial export proteins, family 3 AMBLS11_RS05025 PF01311 Bacterial export proteins, family 1 AMBLS11_RS05030 PF01312 FlhB HrpN YscU SpaS Family AMBLS11_RS05040 PF03734 L,D-transpeptidase catalytic domain AMBLS11_RS05045 PF00771 FHIPEP family AMBLS11_RS05050 PF00448 SRP54-type protein, GTPase domain AMBLS11_RS05055 PF10609 NUBPL iron-transfer P-loop NTPase AMBLS11_RS05060 PF04542 Sigma-70 region 2 AMBLS11_RS05060 PF04545 Sigma-70, region 4 AMBLS11_RS05060 PF04539 Sigma-70 region 3 AMBLS11_RS05065 PF00072 Response regulator receiver domain AMBLS11_RS05070 PF04344 Chemotaxis phosphatase, CheZ AMBLS11_RS05075 PF01627 Hpt domain AMBLS11_RS05075 PF00072 Response regulator receiver domain AMBLS11_RS05075 PF01584 CheW-like domain AMBLS11_RS05075 PF02895 Signal transducing histidine kinase, homodimeric domain AMBLS11_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS05080 PF01339 CheB methylesterase AMBLS11_RS05080 PF00072 Response regulator receiver domain AMBLS11_RS05085 PF13614 AAA domain AMBLS11_RS05095 PF01584 CheW-like domain AMBLS11_RS05105 PF04204 Homoserine O-succinyltransferase AMBLS11_RS05110 PF02607 B12 binding domain AMBLS11_RS05110 PF02574 Homocysteine S-methyltransferase AMBLS11_RS05110 PF00809 Pterin binding enzyme AMBLS11_RS05110 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMBLS11_RS05110 PF02310 B12 binding domain AMBLS11_RS05115 PF00809 Pterin binding enzyme AMBLS11_RS05115 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMBLS11_RS05115 PF02310 B12 binding domain AMBLS11_RS05115 PF02607 B12 binding domain AMBLS11_RS05115 PF02574 Homocysteine S-methyltransferase AMBLS11_RS05125 PF06865 Pyrimidine/purine nucleoside phosphorylase AMBLS11_RS05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS05130 PF00672 HAMP domain AMBLS11_RS05130 PF02743 Cache domain AMBLS11_RS05135 PF03466 LysR substrate binding domain AMBLS11_RS05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS05140 PF03466 LysR substrate binding domain AMBLS11_RS05145 PF00484 Carbonic anhydrase AMBLS11_RS05150 PF00916 Sulfate permease family AMBLS11_RS05150 PF01740 STAS domain AMBLS11_RS05160 PF13977 BetI-type transcriptional repressor, C-terminal AMBLS11_RS05160 PF00440 Bacterial regulatory proteins, tetR family AMBLS11_RS05165 PF05649 Peptidase family M13 AMBLS11_RS05165 PF01431 Peptidase family M13 AMBLS11_RS05175 PF02631 RecX family AMBLS11_RS05180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMBLS11_RS05180 PF02272 DHHA1 domain AMBLS11_RS05180 PF01411 tRNA synthetases class II (A) AMBLS11_RS05185 PF02599 Global regulator protein family AMBLS11_RS05215 PF00682 HMGL-like AMBLS11_RS05215 PF02436 Conserved carboxylase domain AMBLS11_RS05215 PF00364 Biotin-requiring enzyme AMBLS11_RS05220 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMBLS11_RS05225 PF00005 ABC transporter AMBLS11_RS05230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMBLS11_RS05230 PF00005 ABC transporter AMBLS11_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component AMBLS11_RS05245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMBLS11_RS05250 PF00158 Sigma-54 interaction domain AMBLS11_RS05250 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS05255 PF04012 PspA/IM30 family AMBLS11_RS05270 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMBLS11_RS05275 PF00158 Sigma-54 interaction domain AMBLS11_RS05275 PF18024 Helix-turn-helix domain AMBLS11_RS05285 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS05285 PF14497 Glutathione S-transferase, C-terminal domain AMBLS11_RS05290 PF01037 Lrp/AsnC ligand binding domain AMBLS11_RS05295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBLS11_RS05295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMBLS11_RS05305 PF03301 Tryptophan 2,3-dioxygenase AMBLS11_RS05310 PF00593 TonB dependent receptor AMBLS11_RS05315 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS05315 PF00593 TonB dependent receptor AMBLS11_RS05350 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS05355 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS05360 PF02472 Biopolymer transport protein ExbD/TolR AMBLS11_RS05365 PF03544 Gram-negative bacterial TonB protein C-terminal AMBLS11_RS05375 PF05127 Helicase AMBLS11_RS05375 PF13718 GNAT acetyltransferase 2 AMBLS11_RS05375 PF17176 tRNA-binding domain AMBLS11_RS05375 PF08351 Domain of unknown function (DUF1726) AMBLS11_RS05400 PF01636 Phosphotransferase enzyme family AMBLS11_RS05415 PF00583 Acetyltransferase (GNAT) family AMBLS11_RS05425 PF03466 LysR substrate binding domain AMBLS11_RS05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS05430 PF07690 Major Facilitator Superfamily AMBLS11_RS05435 PF00296 Luciferase-like monooxygenase AMBLS11_RS05440 PF00248 Aldo/keto reductase family AMBLS11_RS05455 PF13533 Biotin-lipoyl like AMBLS11_RS05460 PF01047 MarR family AMBLS11_RS05465 PF00593 TonB dependent receptor AMBLS11_RS05465 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS05470 PF16658 Class II release factor RF3, C-terminal domain AMBLS11_RS05470 PF03144 Elongation factor Tu domain 2 AMBLS11_RS05470 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS05475 PF05746 DALR anticodon binding domain AMBLS11_RS05475 PF03485 Arginyl tRNA synthetase N terminal domain AMBLS11_RS05475 PF00750 tRNA synthetases class I (R) AMBLS11_RS05490 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS05490 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS05490 PF00563 EAL domain AMBLS11_RS05500 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS05510 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS05535 PF00487 Fatty acid desaturase AMBLS11_RS05540 PF00042 Globin AMBLS11_RS05540 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS05540 PF00970 Oxidoreductase FAD-binding domain AMBLS11_RS05555 PF00472 RF-1 domain AMBLS11_RS05555 PF03462 PCRF domain AMBLS11_RS05560 PF00152 tRNA synthetases class II (D, K and N) AMBLS11_RS05560 PF01336 OB-fold nucleic acid binding domain AMBLS11_RS05565 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMBLS11_RS05565 PF02558 Ketopantoate reductase PanE/ApbA AMBLS11_RS05570 PF00849 RNA pseudouridylate synthase AMBLS11_RS05580 PF05193 Peptidase M16 inactive domain AMBLS11_RS05580 PF00675 Insulinase (Peptidase family M16) AMBLS11_RS05585 PF04262 Glutamate-cysteine ligase AMBLS11_RS05605 PF01713 Smr domain AMBLS11_RS05610 PF05175 Methyltransferase small domain AMBLS11_RS05615 PF01264 Chorismate synthase AMBLS11_RS05625 PF04293 SpoVR like protein AMBLS11_RS05630 PF04285 Protein of unknown function (DUF444) AMBLS11_RS05635 PF06798 PrkA serine protein kinase C-terminal domain AMBLS11_RS05635 PF08298 PrkA AAA domain AMBLS11_RS05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMBLS11_RS05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMBLS11_RS05645 PF00462 Glutaredoxin AMBLS11_RS05650 PF00593 TonB dependent receptor AMBLS11_RS05650 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS05670 PF04324 BFD-like [2Fe-2S] binding domain AMBLS11_RS05675 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMBLS11_RS05675 PF00578 AhpC/TSA family AMBLS11_RS05680 PF00929 Exonuclease AMBLS11_RS05685 PF18393 MotY N-terminal domain AMBLS11_RS05685 PF00691 OmpA family AMBLS11_RS05690 PF03009 Glycerophosphoryl diester phosphodiesterase family AMBLS11_RS05695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBLS11_RS05700 PF00106 short chain dehydrogenase AMBLS11_RS05705 PF00313 'Cold-shock' DNA-binding domain AMBLS11_RS05715 PF04389 Peptidase family M28 AMBLS11_RS05715 PF02225 PA domain AMBLS11_RS05720 PF00730 HhH-GPD superfamily base excision DNA repair protein AMBLS11_RS05720 PF00633 Helix-hairpin-helix motif AMBLS11_RS05720 PF10576 Iron-sulfur binding domain of endonuclease III AMBLS11_RS05725 PF02508 Rnf-Nqr subunit, membrane protein AMBLS11_RS05730 PF04205 FMN-binding domain AMBLS11_RS05735 PF03116 NQR2, RnfD, RnfE family AMBLS11_RS05740 PF13375 RnfC Barrel sandwich hybrid domain AMBLS11_RS05740 PF12838 4Fe-4S dicluster domain AMBLS11_RS05740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMBLS11_RS05740 PF10531 SLBB domain AMBLS11_RS05745 PF04060 Putative Fe-S cluster AMBLS11_RS05750 PF02508 Rnf-Nqr subunit, membrane protein AMBLS11_RS05765 PF01554 MatE AMBLS11_RS05770 PF04851 Type III restriction enzyme, res subunit AMBLS11_RS05770 PF02151 UvrB/uvrC motif AMBLS11_RS05770 PF00271 Helicase conserved C-terminal domain AMBLS11_RS05770 PF17757 UvrB interaction domain AMBLS11_RS05770 PF12344 Ultra-violet resistance protein B AMBLS11_RS05780 PF06508 Queuosine biosynthesis protein QueC AMBLS11_RS05785 PF04055 Radical SAM superfamily AMBLS11_RS05795 PF00733 Asparagine synthase AMBLS11_RS05795 PF13537 Glutamine amidotransferase domain AMBLS11_RS05815 PF02080 TrkA-C domain AMBLS11_RS05815 PF03600 Citrate transporter AMBLS11_RS05820 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS05825 PF00459 Inositol monophosphatase family AMBLS11_RS05835 PF01507 Phosphoadenosine phosphosulfate reductase family AMBLS11_RS05840 PF00474 Sodium:solute symporter family AMBLS11_RS05845 PF00072 Response regulator receiver domain AMBLS11_RS05845 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS05855 PF04542 Sigma-70 region 2 AMBLS11_RS05855 PF04545 Sigma-70, region 4 AMBLS11_RS05870 PF07584 Aerotolerance regulator N-terminal AMBLS11_RS05870 PF13519 von Willebrand factor type A domain AMBLS11_RS05875 PF00092 von Willebrand factor type A domain AMBLS11_RS05885 PF01882 Protein of unknown function DUF58 AMBLS11_RS05890 PF07726 ATPase family associated with various cellular activities (AAA) AMBLS11_RS05890 PF17863 AAA lid domain AMBLS11_RS05895 PF02803 Thiolase, C-terminal domain AMBLS11_RS05895 PF00108 Thiolase, N-terminal domain AMBLS11_RS05900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS05900 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS05900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMBLS11_RS05910 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS05910 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS05910 PF00563 EAL domain AMBLS11_RS05915 PF05193 Peptidase M16 inactive domain AMBLS11_RS05915 PF00675 Insulinase (Peptidase family M16) AMBLS11_RS05920 PF00300 Histidine phosphatase superfamily (branch 1) AMBLS11_RS05930 PF00571 CBS domain AMBLS11_RS05930 PF01595 Cyclin M transmembrane N-terminal domain AMBLS11_RS05930 PF03471 Transporter associated domain AMBLS11_RS05935 PF01578 Cytochrome C assembly protein AMBLS11_RS05940 PF00448 SRP54-type protein, GTPase domain AMBLS11_RS05940 PF02881 SRP54-type protein, helical bundle domain AMBLS11_RS05940 PF02978 Signal peptide binding domain AMBLS11_RS05975 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS05980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS05985 PF00005 ABC transporter AMBLS11_RS05985 PF00664 ABC transporter transmembrane region AMBLS11_RS05995 PF00886 Ribosomal protein S16 AMBLS11_RS06000 PF05239 PRC-barrel domain AMBLS11_RS06000 PF01782 RimM N-terminal domain AMBLS11_RS06005 PF01746 tRNA (Guanine-1)-methyltransferase AMBLS11_RS06010 PF01245 Ribosomal protein L19 AMBLS11_RS06025 PF03458 UPF0126 domain AMBLS11_RS06030 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS06035 PF00793 DAHP synthetase I family AMBLS11_RS06040 PF02153 Prephenate dehydrogenase AMBLS11_RS06040 PF01817 Chorismate mutase type II AMBLS11_RS06070 PF01817 Chorismate mutase type II AMBLS11_RS06070 PF00800 Prephenate dehydratase AMBLS11_RS06075 PF00072 Response regulator receiver domain AMBLS11_RS06080 PF01253 Translation initiation factor SUI1 AMBLS11_RS06090 PF00072 Response regulator receiver domain AMBLS11_RS06090 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS06100 PF00563 EAL domain AMBLS11_RS06100 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS06100 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS06110 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS06120 PF00072 Response regulator receiver domain AMBLS11_RS06120 PF00158 Sigma-54 interaction domain AMBLS11_RS06135 PF01336 OB-fold nucleic acid binding domain AMBLS11_RS06135 PF00152 tRNA synthetases class II (D, K and N) AMBLS11_RS06135 PF02938 GAD domain AMBLS11_RS06140 PF00293 NUDIX domain AMBLS11_RS06145 PF02075 Crossover junction endodeoxyribonuclease RuvC AMBLS11_RS06150 PF07499 RuvA, C-terminal domain AMBLS11_RS06150 PF01330 RuvA N terminal domain AMBLS11_RS06155 PF05491 RuvB C-terminal winged helix domain AMBLS11_RS06155 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMBLS11_RS06155 PF17864 RuvB AAA lid domain AMBLS11_RS06160 PF03061 Thioesterase superfamily AMBLS11_RS06165 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS06170 PF02472 Biopolymer transport protein ExbD/TolR AMBLS11_RS06180 PF04052 TolB amino-terminal domain AMBLS11_RS06180 PF07676 WD40-like Beta Propeller Repeat AMBLS11_RS06185 PF00691 OmpA family AMBLS11_RS06190 PF16331 TolA binding protein trimerisation AMBLS11_RS06190 PF13174 Tetratricopeptide repeat AMBLS11_RS06215 PF02445 Quinolinate synthetase A protein AMBLS11_RS06230 PF01734 Patatin-like phospholipase AMBLS11_RS06235 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMBLS11_RS06235 PF02558 Ketopantoate reductase PanE/ApbA AMBLS11_RS06250 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMBLS11_RS06250 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_RS06255 PF01292 Prokaryotic cytochrome b561 AMBLS11_RS06260 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS06260 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS06260 PF00563 EAL domain AMBLS11_RS06275 PF01863 Protein of unknown function DUF45 AMBLS11_RS06280 PF00571 CBS domain AMBLS11_RS06285 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS06295 PF08361 MAATS-type transcriptional repressor, C-terminal region AMBLS11_RS06295 PF00440 Bacterial regulatory proteins, tetR family AMBLS11_RS06300 PF00593 TonB dependent receptor AMBLS11_RS06300 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS06310 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS06320 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS06330 PF02470 MlaD protein AMBLS11_RS06335 PF04403 Paraquat-inducible protein A AMBLS11_RS06345 PF00152 tRNA synthetases class II (D, K and N) AMBLS11_RS06345 PF01336 OB-fold nucleic acid binding domain AMBLS11_RS06355 PF01699 Sodium/calcium exchanger protein AMBLS11_RS06360 PF08443 RimK-like ATP-grasp domain AMBLS11_RS06360 PF18030 RimK PreATP-grasp domain AMBLS11_RS06380 PF00202 Aminotransferase class-III AMBLS11_RS06385 PF04055 Radical SAM superfamily AMBLS11_RS06385 PF06968 Biotin and Thiamin Synthesis associated domain AMBLS11_RS06390 PF00155 Aminotransferase class I and II AMBLS11_RS06395 PF08241 Methyltransferase domain AMBLS11_RS06405 PF03575 Peptidase family S51 AMBLS11_RS06410 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMBLS11_RS06415 PF01032 FecCD transport family AMBLS11_RS06420 PF00005 ABC transporter AMBLS11_RS06425 PF01474 Class-II DAHP synthetase family AMBLS11_RS06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS06430 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS06430 PF13493 Domain of unknown function (DUF4118) AMBLS11_RS06430 PF02702 Osmosensitive K+ channel His kinase sensor domain AMBLS11_RS06435 PF00072 Response regulator receiver domain AMBLS11_RS06435 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS06440 PF02080 TrkA-C domain AMBLS11_RS06440 PF02254 TrkA-N domain AMBLS11_RS06445 PF02386 Cation transport protein AMBLS11_RS06460 PF00664 ABC transporter transmembrane region AMBLS11_RS06460 PF00005 ABC transporter AMBLS11_RS06465 PF06463 Molybdenum Cofactor Synthesis C AMBLS11_RS06465 PF04055 Radical SAM superfamily AMBLS11_RS06475 PF00072 Response regulator receiver domain AMBLS11_RS06475 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS06500 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMBLS11_RS06540 PF01207 Dihydrouridine synthase (Dus) AMBLS11_RS06555 PF13472 GDSL-like Lipase/Acylhydrolase family AMBLS11_RS06560 PF00005 ABC transporter AMBLS11_RS06570 PF01370 NAD dependent epimerase/dehydratase family AMBLS11_RS06570 PF08338 Domain of unknown function (DUF1731) AMBLS11_RS06575 PF02152 Dihydroneopterin aldolase AMBLS11_RS06580 PF01594 AI-2E family transporter AMBLS11_RS06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS06585 PF08918 PhoQ Sensor AMBLS11_RS06590 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS06590 PF00072 Response regulator receiver domain AMBLS11_RS06605 PF03795 YCII-related domain AMBLS11_RS06610 PF00290 Tryptophan synthase alpha chain AMBLS11_RS06615 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS06620 PF00218 Indole-3-glycerol phosphate synthase AMBLS11_RS06620 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMBLS11_RS06625 PF00591 Glycosyl transferase family, a/b domain AMBLS11_RS06625 PF02885 Glycosyl transferase family, helical bundle domain AMBLS11_RS06630 PF00117 Glutamine amidotransferase class-I AMBLS11_RS06635 PF04715 Anthranilate synthase component I, N terminal region AMBLS11_RS06635 PF00425 chorismate binding enzyme AMBLS11_RS06640 PF02811 PHP domain AMBLS11_RS06645 PF01300 Telomere recombination AMBLS11_RS06650 PF02616 Segregation and condensation protein ScpA AMBLS11_RS06655 PF04079 Segregation and condensation complex subunit ScpB AMBLS11_RS06660 PF00849 RNA pseudouridylate synthase AMBLS11_RS06660 PF01479 S4 domain AMBLS11_RS06665 PF00248 Aldo/keto reductase family AMBLS11_RS06670 PF14602 Hexapeptide repeat of succinyl-transferase AMBLS11_RS06670 PF12464 Maltose acetyltransferase AMBLS11_RS06680 PF04286 Protein of unknown function (DUF445) AMBLS11_RS06685 PF05724 Thiopurine S-methyltransferase (TPMT) AMBLS11_RS06690 PF04355 SmpA / OmlA family AMBLS11_RS06695 PF02463 RecF/RecN/SMC N terminal domain AMBLS11_RS06700 PF00210 Ferritin-like domain AMBLS11_RS06705 PF01513 ATP-NAD kinase AMBLS11_RS06715 PF00465 Iron-containing alcohol dehydrogenase AMBLS11_RS06730 PF00561 alpha/beta hydrolase fold AMBLS11_RS06740 PF00593 TonB dependent receptor AMBLS11_RS06740 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS06745 PF00072 Response regulator receiver domain AMBLS11_RS06745 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS06755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS06755 PF01627 Hpt domain AMBLS11_RS06755 PF00072 Response regulator receiver domain AMBLS11_RS06755 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS06755 PF00672 HAMP domain AMBLS11_RS06760 PF01025 GrpE AMBLS11_RS06765 PF00012 Hsp70 protein AMBLS11_RS06770 PF01556 DnaJ C terminal domain AMBLS11_RS06770 PF00684 DnaJ central domain AMBLS11_RS06770 PF00226 DnaJ domain AMBLS11_RS06775 PF01322 Cytochrome C' AMBLS11_RS06780 PF00563 EAL domain AMBLS11_RS06780 PF13426 PAS domain AMBLS11_RS06780 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS06785 PF16177 Acetyl-coenzyme A synthetase N-terminus AMBLS11_RS06785 PF00501 AMP-binding enzyme AMBLS11_RS06785 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS06795 PF05173 Dihydrodipicolinate reductase, C-terminus AMBLS11_RS06795 PF01113 Dihydrodipicolinate reductase, N-terminus AMBLS11_RS06800 PF00117 Glutamine amidotransferase class-I AMBLS11_RS06800 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMBLS11_RS06805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMBLS11_RS06805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBLS11_RS06805 PF02142 MGS-like domain AMBLS11_RS06810 PF03449 Transcription elongation factor, N-terminal AMBLS11_RS06810 PF01272 Transcription elongation factor, GreA/GreB, C-term AMBLS11_RS06830 PF00011 Hsp20/alpha crystallin family AMBLS11_RS06835 PF00871 Acetokinase family AMBLS11_RS06840 PF01515 Phosphate acetyl/butaryl transferase AMBLS11_RS06840 PF07085 DRTGG domain AMBLS11_RS06845 PF01979 Amidohydrolase family AMBLS11_RS06850 PF00795 Carbon-nitrogen hydrolase AMBLS11_RS06855 PF03471 Transporter associated domain AMBLS11_RS06855 PF00571 CBS domain AMBLS11_RS06860 PF02130 Uncharacterized protein family UPF0054 AMBLS11_RS06865 PF02562 PhoH-like protein AMBLS11_RS06870 PF04055 Radical SAM superfamily AMBLS11_RS06870 PF01938 TRAM domain AMBLS11_RS06870 PF00919 Uncharacterized protein family UPF0004 AMBLS11_RS06880 PF01494 FAD binding domain AMBLS11_RS06905 PF00593 TonB dependent receptor AMBLS11_RS06905 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS06910 PF03061 Thioesterase superfamily AMBLS11_RS06915 PF01613 Flavin reductase like domain AMBLS11_RS06925 PF01235 Sodium:alanine symporter family AMBLS11_RS06970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMBLS11_RS06975 PF01926 50S ribosome-binding GTPase AMBLS11_RS06975 PF06071 Protein of unknown function (DUF933) AMBLS11_RS06980 PF01195 Peptidyl-tRNA hydrolase AMBLS11_RS06985 PF14693 Ribosomal protein TL5, C-terminal domain AMBLS11_RS06985 PF01386 Ribosomal L25p family AMBLS11_RS06990 PF00107 Zinc-binding dehydrogenase AMBLS11_RS06990 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS07005 PF14572 Phosphoribosyl synthetase-associated domain AMBLS11_RS07005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMBLS11_RS07015 PF08544 GHMP kinases C terminal AMBLS11_RS07015 PF00288 GHMP kinases N terminal domain AMBLS11_RS07020 PF03550 Outer membrane lipoprotein LolB AMBLS11_RS07025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMBLS11_RS07025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMBLS11_RS07025 PF01488 Shikimate / quinate 5-dehydrogenase AMBLS11_RS07030 PF00472 RF-1 domain AMBLS11_RS07030 PF03462 PCRF domain AMBLS11_RS07035 PF17827 PrmC N-terminal domain AMBLS11_RS07035 PF13847 Methyltransferase domain AMBLS11_RS07040 PF11849 Domain of unknown function (DUF3369) AMBLS11_RS07045 PF04247 Invasion gene expression up-regulator, SirB AMBLS11_RS07050 PF00793 DAHP synthetase I family AMBLS11_RS07060 PF03466 LysR substrate binding domain AMBLS11_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS07070 PF04241 Protein of unknown function (DUF423) AMBLS11_RS07075 PF18125 RlmM ferredoxin-like domain AMBLS11_RS07075 PF01728 FtsJ-like methyltransferase AMBLS11_RS07080 PF03764 Elongation factor G, domain IV AMBLS11_RS07080 PF03144 Elongation factor Tu domain 2 AMBLS11_RS07080 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS07080 PF14492 Elongation Factor G, domain II AMBLS11_RS07080 PF00679 Elongation factor G C-terminus AMBLS11_RS07085 PF02560 Cyanate lyase C-terminal domain AMBLS11_RS07090 PF00069 Protein kinase domain AMBLS11_RS07095 PF01226 Formate/nitrite transporter AMBLS11_RS07100 PF11992 Domain of unknown function (DUF3488) AMBLS11_RS07100 PF01841 Transglutaminase-like superfamily AMBLS11_RS07100 PF13559 Domain of unknown function (DUF4129) AMBLS11_RS07110 PF07726 ATPase family associated with various cellular activities (AAA) AMBLS11_RS07110 PF17863 AAA lid domain AMBLS11_RS07120 PF03925 SeqA protein C-terminal domain AMBLS11_RS07120 PF17206 SeqA protein N-terminal domain AMBLS11_RS07125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBLS11_RS07125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBLS11_RS07125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBLS11_RS07125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBLS11_RS07130 PF00343 Carbohydrate phosphorylase AMBLS11_RS07135 PF00563 EAL domain AMBLS11_RS07135 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07135 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS07140 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMBLS11_RS07150 PF01906 Putative heavy-metal-binding AMBLS11_RS07155 PF00326 Prolyl oligopeptidase family AMBLS11_RS07160 PF00375 Sodium:dicarboxylate symporter family AMBLS11_RS07175 PF07687 Peptidase dimerisation domain AMBLS11_RS07175 PF01546 Peptidase family M20/M25/M40 AMBLS11_RS07180 PF03960 ArsC family AMBLS11_RS07185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AMBLS11_RS07200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBLS11_RS07205 PF04209 homogentisate 1,2-dioxygenase AMBLS11_RS07225 PF00563 EAL domain AMBLS11_RS07225 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS07225 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07230 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS07230 PF00563 EAL domain AMBLS11_RS07230 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07235 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS07250 PF00999 Sodium/hydrogen exchanger family AMBLS11_RS07250 PF02254 TrkA-N domain AMBLS11_RS07255 PF02525 Flavodoxin-like fold AMBLS11_RS07265 PF01638 HxlR-like helix-turn-helix AMBLS11_RS07275 PF00563 EAL domain AMBLS11_RS07275 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07275 PF05231 MASE1 AMBLS11_RS07275 PF08447 PAS fold AMBLS11_RS07275 PF08448 PAS fold AMBLS11_RS07275 PF13426 PAS domain AMBLS11_RS07285 PF01979 Amidohydrolase family AMBLS11_RS07290 PF00576 HIUase/Transthyretin family AMBLS11_RS07305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBLS11_RS07305 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_RS07310 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS07310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBLS11_RS07310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_RS07310 PF01799 [2Fe-2S] binding domain AMBLS11_RS07315 PF00440 Bacterial regulatory proteins, tetR family AMBLS11_RS07315 PF08362 YcdC-like protein, C-terminal region AMBLS11_RS07330 PF00860 Permease family AMBLS11_RS07335 PF00962 Adenosine/AMP deaminase AMBLS11_RS07345 PF00563 EAL domain AMBLS11_RS07345 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07345 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS07350 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07350 PF00072 Response regulator receiver domain AMBLS11_RS07355 PF09308 LuxQ, periplasmic AMBLS11_RS07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS07355 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS07355 PF00072 Response regulator receiver domain AMBLS11_RS07365 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS07365 PF00593 TonB dependent receptor AMBLS11_RS07370 PF00860 Permease family AMBLS11_RS07375 PF00962 Adenosine/AMP deaminase AMBLS11_RS07385 PF07687 Peptidase dimerisation domain AMBLS11_RS07385 PF01546 Peptidase family M20/M25/M40 AMBLS11_RS07390 PF00266 Aminotransferase class-V AMBLS11_RS07395 PF01925 Sulfite exporter TauE/SafE AMBLS11_RS07405 PF01425 Amidase AMBLS11_RS07440 PF03881 Fructosamine kinase AMBLS11_RS07445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMBLS11_RS07445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMBLS11_RS07445 PF02824 TGS domain AMBLS11_RS07445 PF03129 Anticodon binding domain AMBLS11_RS07450 PF05198 Translation initiation factor IF-3, N-terminal domain AMBLS11_RS07450 PF00707 Translation initiation factor IF-3, C-terminal domain AMBLS11_RS07455 PF01632 Ribosomal protein L35 AMBLS11_RS07460 PF00453 Ribosomal protein L20 AMBLS11_RS07465 PF00483 Nucleotidyl transferase AMBLS11_RS07465 PF01050 Mannose-6-phosphate isomerase AMBLS11_RS07470 PF02397 Bacterial sugar transferase AMBLS11_RS07480 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AMBLS11_RS07480 PF10531 SLBB domain AMBLS11_RS07480 PF02563 Polysaccharide biosynthesis/export protein AMBLS11_RS07485 PF13614 AAA domain AMBLS11_RS07515 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS07515 PF08448 PAS fold AMBLS11_RS07515 PF00563 EAL domain AMBLS11_RS07525 PF00534 Glycosyl transferases group 1 AMBLS11_RS07525 PF13439 Glycosyltransferase Family 4 AMBLS11_RS07535 PF00534 Glycosyl transferases group 1 AMBLS11_RS07535 PF13477 Glycosyl transferase 4-like AMBLS11_RS07550 PF00535 Glycosyl transferase family 2 AMBLS11_RS07575 PF00535 Glycosyl transferase family 2 AMBLS11_RS07585 PF13579 Glycosyl transferase 4-like domain AMBLS11_RS07585 PF00534 Glycosyl transferases group 1 AMBLS11_RS07600 PF00535 Glycosyl transferase family 2 AMBLS11_RS07605 PF01757 Acyltransferase family AMBLS11_RS07610 PF01757 Acyltransferase family AMBLS11_RS07620 PF01409 tRNA synthetases class II core domain (F) AMBLS11_RS07620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMBLS11_RS07625 PF03483 B3/4 domain AMBLS11_RS07625 PF03484 tRNA synthetase B5 domain AMBLS11_RS07625 PF03147 Ferredoxin-fold anticodon binding domain AMBLS11_RS07625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMBLS11_RS07625 PF01588 Putative tRNA binding domain AMBLS11_RS07630 PF00216 Bacterial DNA-binding protein AMBLS11_RS07640 PF04073 Aminoacyl-tRNA editing domain AMBLS11_RS07645 PF01804 Penicillin amidase AMBLS11_RS07650 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBLS11_RS07655 PF01923 Cobalamin adenosyltransferase AMBLS11_RS07665 PF02559 CarD-like/TRCF domain AMBLS11_RS07665 PF17757 UvrB interaction domain AMBLS11_RS07665 PF00270 DEAD/DEAH box helicase AMBLS11_RS07665 PF03461 TRCF domain AMBLS11_RS07665 PF00271 Helicase conserved C-terminal domain AMBLS11_RS07675 PF02687 FtsX-like permease family AMBLS11_RS07675 PF12704 MacB-like periplasmic core domain AMBLS11_RS07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS07685 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS07700 PF03372 Endonuclease/Exonuclease/phosphatase family AMBLS11_RS07735 PF07690 Major Facilitator Superfamily AMBLS11_RS07745 PF00483 Nucleotidyl transferase AMBLS11_RS07760 PF00682 HMGL-like AMBLS11_RS07765 PF18140 Propionyl-coenzyme A carboxylase BT domain AMBLS11_RS07765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBLS11_RS07765 PF00364 Biotin-requiring enzyme AMBLS11_RS07765 PF00289 Biotin carboxylase, N-terminal domain AMBLS11_RS07765 PF02785 Biotin carboxylase C-terminal domain AMBLS11_RS07770 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS07775 PF01039 Carboxyl transferase domain AMBLS11_RS07780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS07780 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS07780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS07785 PF13411 MerR HTH family regulatory protein AMBLS11_RS07790 PF00108 Thiolase, N-terminal domain AMBLS11_RS07790 PF02803 Thiolase, C-terminal domain AMBLS11_RS07800 PF00266 Aminotransferase class-V AMBLS11_RS07815 PF08411 Exonuclease C-terminal AMBLS11_RS07815 PF00929 Exonuclease AMBLS11_RS07820 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS07820 PF00672 HAMP domain AMBLS11_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS07820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS07820 PF00072 Response regulator receiver domain AMBLS11_RS07820 PF01627 Hpt domain AMBLS11_RS07825 PF01112 Asparaginase AMBLS11_RS07835 PF02333 Phytase AMBLS11_RS07850 PF12833 Helix-turn-helix domain AMBLS11_RS07850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMBLS11_RS07860 PF04408 Helicase associated domain (HA2) AMBLS11_RS07860 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMBLS11_RS07860 PF11898 Domain of unknown function (DUF3418) AMBLS11_RS07860 PF00271 Helicase conserved C-terminal domain AMBLS11_RS07860 PF00270 DEAD/DEAH box helicase AMBLS11_RS07875 PF10672 S-adenosylmethionine-dependent methyltransferase AMBLS11_RS07875 PF17785 PUA-like domain AMBLS11_RS07880 PF00698 Acyl transferase domain AMBLS11_RS07880 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS07880 PF00550 Phosphopantetheine attachment site AMBLS11_RS07880 PF14765 Polyketide synthase dehydratase AMBLS11_RS07880 PF00109 Beta-ketoacyl synthase, N-terminal domain AMBLS11_RS07880 PF02801 Beta-ketoacyl synthase, C-terminal domain AMBLS11_RS07880 PF08659 KR domain AMBLS11_RS07880 PF16197 Ketoacyl-synthetase C-terminal extension AMBLS11_RS07885 PF00075 RNase H AMBLS11_RS07890 PF00929 Exonuclease AMBLS11_RS07920 PF12792 CSS motif domain associated with EAL AMBLS11_RS07920 PF00563 EAL domain AMBLS11_RS07925 PF00005 ABC transporter AMBLS11_RS07930 PF12704 MacB-like periplasmic core domain AMBLS11_RS07930 PF02687 FtsX-like permease family AMBLS11_RS07935 PF00375 Sodium:dicarboxylate symporter family AMBLS11_RS07945 PF04996 Succinylarginine dihydrolase AMBLS11_RS07950 PF01396 Topoisomerase DNA binding C4 zinc finger AMBLS11_RS07950 PF01751 Toprim domain AMBLS11_RS07950 PF01131 DNA topoisomerase AMBLS11_RS07950 PF08272 Topoisomerase I zinc-ribbon-like AMBLS11_RS07955 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AMBLS11_RS07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS07970 PF03466 LysR substrate binding domain AMBLS11_RS07975 PF12804 MobA-like NTP transferase domain AMBLS11_RS07980 PF02634 FdhD/NarQ family AMBLS11_RS07985 PF00384 Molybdopterin oxidoreductase AMBLS11_RS07990 PF13673 Acetyltransferase (GNAT) domain AMBLS11_RS08000 PF10150 Ribonuclease E/G family AMBLS11_RS08000 PF12111 Polyribonucleotide phosphorylase C terminal AMBLS11_RS08000 PF00575 S1 RNA binding domain AMBLS11_RS08005 PF01479 S4 domain AMBLS11_RS08005 PF00849 RNA pseudouridylate synthase AMBLS11_RS08010 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS08015 PF02545 Maf-like protein AMBLS11_RS08020 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMBLS11_RS08025 PF01783 Ribosomal L32p protein family AMBLS11_RS08030 PF02504 Fatty acid synthesis protein AMBLS11_RS08035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMBLS11_RS08035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMBLS11_RS08040 PF00698 Acyl transferase domain AMBLS11_RS08050 PF00550 Phosphopantetheine attachment site AMBLS11_RS08055 PF02801 Beta-ketoacyl synthase, C-terminal domain AMBLS11_RS08055 PF00109 Beta-ketoacyl synthase, N-terminal domain AMBLS11_RS08060 PF01063 Amino-transferase class IV AMBLS11_RS08065 PF02618 YceG-like family AMBLS11_RS08070 PF02223 Thymidylate kinase AMBLS11_RS08075 PF09115 DNA polymerase III, delta subunit, C terminal AMBLS11_RS08080 PF01026 TatD related DNase AMBLS11_RS08085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMBLS11_RS08085 PF01243 Pyridoxamine 5'-phosphate oxidase AMBLS11_RS08090 PF13460 NAD(P)H-binding AMBLS11_RS08095 PF08448 PAS fold AMBLS11_RS08095 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS08105 PF00665 Integrase core domain AMBLS11_RS08105 PF13276 HTH-like domain AMBLS11_RS08105 PF13333 Integrase core domain AMBLS11_RS08125 PF00561 alpha/beta hydrolase fold AMBLS11_RS08130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS08130 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS08130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMBLS11_RS08135 PF02803 Thiolase, C-terminal domain AMBLS11_RS08135 PF00108 Thiolase, N-terminal domain AMBLS11_RS08140 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMBLS11_RS08140 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS08140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS08140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS08155 PF04198 Putative sugar-binding domain AMBLS11_RS08160 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS08170 PF08125 Mannitol dehydrogenase C-terminal domain AMBLS11_RS08170 PF01232 Mannitol dehydrogenase Rossmann domain AMBLS11_RS08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS08180 PF03466 LysR substrate binding domain AMBLS11_RS08185 PF01575 MaoC like domain AMBLS11_RS08190 PF00924 Mechanosensitive ion channel AMBLS11_RS08195 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS08195 PF00593 TonB dependent receptor AMBLS11_RS08200 PF01329 Pterin 4 alpha carbinolamine dehydratase AMBLS11_RS08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS08220 PF01627 Hpt domain AMBLS11_RS08220 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS08220 PF00072 Response regulator receiver domain AMBLS11_RS08225 PF00072 Response regulator receiver domain AMBLS11_RS08230 PF02576 RimP N-terminal domain AMBLS11_RS08230 PF17384 RimP C-terminal SH3 domain AMBLS11_RS08235 PF13184 NusA-like KH domain AMBLS11_RS08235 PF00575 S1 RNA binding domain AMBLS11_RS08235 PF08529 NusA N-terminal domain AMBLS11_RS08240 PF04760 Translation initiation factor IF-2, N-terminal region AMBLS11_RS08240 PF08364 Bacterial translation initiation factor IF-2 associated region AMBLS11_RS08240 PF11987 Translation-initiation factor 2 AMBLS11_RS08240 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS08245 PF02033 Ribosome-binding factor A AMBLS11_RS08250 PF09157 Pseudouridine synthase II TruB, C-terminal AMBLS11_RS08250 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMBLS11_RS08250 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMBLS11_RS08255 PF00312 Ribosomal protein S15 AMBLS11_RS08260 PF00563 EAL domain AMBLS11_RS08260 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS08260 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS08265 PF01479 S4 domain AMBLS11_RS08265 PF00849 RNA pseudouridylate synthase AMBLS11_RS08275 PF00795 Carbon-nitrogen hydrolase AMBLS11_RS08275 PF00583 Acetyltransferase (GNAT) family AMBLS11_RS08295 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMBLS11_RS08295 PF00578 AhpC/TSA family AMBLS11_RS08300 PF13192 Thioredoxin domain AMBLS11_RS08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS08305 PF00593 TonB dependent receptor AMBLS11_RS08305 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS08340 PF11842 Domain of unknown function (DUF3362) AMBLS11_RS08340 PF04055 Radical SAM superfamily AMBLS11_RS08340 PF08497 Radical SAM N-terminal AMBLS11_RS08355 PF00563 EAL domain AMBLS11_RS08355 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS08355 PF01590 GAF domain AMBLS11_RS08355 PF00360 Phytochrome region AMBLS11_RS08380 PF00106 short chain dehydrogenase AMBLS11_RS08385 PF01370 NAD dependent epimerase/dehydratase family AMBLS11_RS08390 PF01758 Sodium Bile acid symporter family AMBLS11_RS08405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBLS11_RS08410 PF01668 SmpB protein AMBLS11_RS08415 PF03364 Polyketide cyclase / dehydrase and lipid transport AMBLS11_RS08420 PF03658 RnfH family Ubiquitin AMBLS11_RS08430 PF02028 BCCT, betaine/carnitine/choline family transporter AMBLS11_RS08435 PF00593 TonB dependent receptor AMBLS11_RS08435 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS08440 PF13181 Tetratricopeptide repeat AMBLS11_RS08455 PF03618 Kinase/pyrophosphorylase AMBLS11_RS08460 PF00391 PEP-utilising enzyme, mobile domain AMBLS11_RS08460 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMBLS11_RS08460 PF02896 PEP-utilising enzyme, TIM barrel domain AMBLS11_RS08465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBLS11_RS08470 PF01799 [2Fe-2S] binding domain AMBLS11_RS08470 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS08490 PF08007 Cupin superfamily protein AMBLS11_RS08495 PF00211 Adenylate and Guanylate cyclase catalytic domain AMBLS11_RS08500 PF00206 Lyase AMBLS11_RS08500 PF08328 Adenylosuccinate lyase C-terminal AMBLS11_RS08505 PF04356 Protein of unknown function (DUF489) AMBLS11_RS08515 PF00849 RNA pseudouridylate synthase AMBLS11_RS08520 PF03971 Monomeric isocitrate dehydrogenase AMBLS11_RS08525 PF00313 'Cold-shock' DNA-binding domain AMBLS11_RS08530 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMBLS11_RS08535 PF10431 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS08535 PF02861 Clp amino terminal domain, pathogenicity island component AMBLS11_RS08535 PF17871 AAA lid domain AMBLS11_RS08535 PF07724 AAA domain (Cdc48 subfamily) AMBLS11_RS08535 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS08540 PF01176 Translation initiation factor 1A / IF-1 AMBLS11_RS08545 PF04376 Arginine-tRNA-protein transferase, N terminus AMBLS11_RS08545 PF04377 Arginine-tRNA-protein transferase, C terminus AMBLS11_RS08550 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMBLS11_RS08555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS08560 PF04217 Protein of unknown function, DUF412 AMBLS11_RS08565 PF01343 Peptidase family S49 AMBLS11_RS08580 PF00881 Nitroreductase family AMBLS11_RS08590 PF00710 Asparaginase, N-terminal AMBLS11_RS08590 PF17763 Glutaminase/Asparaginase C-terminal domain AMBLS11_RS08595 PF04055 Radical SAM superfamily AMBLS11_RS08595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMBLS11_RS08600 PF03099 Biotin/lipoate A/B protein ligase family AMBLS11_RS08605 PF04359 Protein of unknown function (DUF493) AMBLS11_RS08610 PF07943 Penicillin-binding protein 5, C-terminal domain AMBLS11_RS08610 PF00768 D-alanyl-D-alanine carboxypeptidase AMBLS11_RS08615 PF05036 Sporulation related domain AMBLS11_RS08615 PF03330 Lytic transglycolase AMBLS11_RS08620 PF01098 Cell cycle protein AMBLS11_RS08625 PF03717 Penicillin-binding Protein dimerisation domain AMBLS11_RS08625 PF00905 Penicillin binding protein transpeptidase domain AMBLS11_RS08630 PF02590 Predicted SPOUT methyltransferase AMBLS11_RS08640 PF01467 Cytidylyltransferase-like AMBLS11_RS08645 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AMBLS11_RS08645 PF06144 DNA polymerase III, delta subunit AMBLS11_RS08650 PF04390 Lipopolysaccharide-assembly AMBLS11_RS08655 PF13603 Leucyl-tRNA synthetase, Domain 2 AMBLS11_RS08655 PF00133 tRNA synthetases class I (I, L, M and V) AMBLS11_RS08655 PF08264 Anticodon-binding domain of tRNA AMBLS11_RS08665 PF13654 AAA domain AMBLS11_RS08665 PF05362 Lon protease (S16) C-terminal proteolytic domain AMBLS11_RS08680 PF00106 short chain dehydrogenase AMBLS11_RS08685 PF01985 CRS1 / YhbY (CRM) domain AMBLS11_RS08690 PF01728 FtsJ-like methyltransferase AMBLS11_RS08695 PF06480 FtsH Extracellular AMBLS11_RS08695 PF01434 Peptidase family M41 AMBLS11_RS08695 PF17862 AAA+ lid domain AMBLS11_RS08695 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS08700 PF00809 Pterin binding enzyme AMBLS11_RS08705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBLS11_RS08705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBLS11_RS08705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBLS11_RS08705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBLS11_RS08710 PF00121 Triosephosphate isomerase AMBLS11_RS08715 PF03840 Preprotein translocase SecG subunit AMBLS11_RS08725 PF00563 EAL domain AMBLS11_RS08725 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS08725 PF13188 PAS domain AMBLS11_RS08725 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS08740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMBLS11_RS08740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMBLS11_RS08745 PF02142 MGS-like domain AMBLS11_RS08745 PF00781 Diacylglycerol kinase catalytic domain AMBLS11_RS08775 PF00474 Sodium:solute symporter family AMBLS11_RS08780 PF00696 Amino acid kinase family AMBLS11_RS08785 PF00171 Aldehyde dehydrogenase family AMBLS11_RS08800 PF03725 3' exoribonuclease family, domain 2 AMBLS11_RS08800 PF00013 KH domain AMBLS11_RS08800 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMBLS11_RS08800 PF00575 S1 RNA binding domain AMBLS11_RS08800 PF01138 3' exoribonuclease family, domain 1 AMBLS11_RS08900 PF07690 Major Facilitator Superfamily AMBLS11_RS08910 PF03544 Gram-negative bacterial TonB protein C-terminal AMBLS11_RS08930 PF13181 Tetratricopeptide repeat AMBLS11_RS08930 PF07719 Tetratricopeptide repeat AMBLS11_RS08945 PF06470 SMC proteins Flexible Hinge Domain AMBLS11_RS08945 PF02463 RecF/RecN/SMC N terminal domain AMBLS11_RS08950 PF04354 ZipA, C-terminal FtsZ-binding domain AMBLS11_RS08955 PF12826 Helix-hairpin-helix motif AMBLS11_RS08955 PF00533 BRCA1 C Terminus (BRCT) domain AMBLS11_RS08955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMBLS11_RS08955 PF01653 NAD-dependent DNA ligase adenylation domain AMBLS11_RS08955 PF03120 NAD-dependent DNA ligase OB-fold domain AMBLS11_RS08970 PF00005 ABC transporter AMBLS11_RS08970 PF00664 ABC transporter transmembrane region AMBLS11_RS08975 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMBLS11_RS08980 PF03966 Trm112p-like protein AMBLS11_RS08985 PF02348 Cytidylyltransferase AMBLS11_RS08990 PF00106 short chain dehydrogenase AMBLS11_RS09000 PF00919 Uncharacterized protein family UPF0004 AMBLS11_RS09000 PF18693 TRAM domain AMBLS11_RS09000 PF04055 Radical SAM superfamily AMBLS11_RS09015 PF00899 ThiF family AMBLS11_RS09020 PF13409 Glutathione S-transferase, N-terminal domain AMBLS11_RS09025 PF02678 Pirin AMBLS11_RS09025 PF05726 Pirin C-terminal cupin domain AMBLS11_RS09035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBLS11_RS09035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBLS11_RS09035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBLS11_RS09035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBLS11_RS09045 PF00285 Citrate synthase, C-terminal domain AMBLS11_RS09050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMBLS11_RS09055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMBLS11_RS09060 PF00890 FAD binding domain AMBLS11_RS09060 PF02910 Fumarate reductase flavoprotein C-term AMBLS11_RS09065 PF13085 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS09070 PF02779 Transketolase, pyrimidine binding domain AMBLS11_RS09070 PF16870 2-oxoglutarate dehydrogenase C-terminal AMBLS11_RS09070 PF16078 2-oxoglutarate dehydrogenase N-terminus AMBLS11_RS09070 PF00676 Dehydrogenase E1 component AMBLS11_RS09075 PF02817 e3 binding domain AMBLS11_RS09075 PF00364 Biotin-requiring enzyme AMBLS11_RS09075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMBLS11_RS09080 PF00549 CoA-ligase AMBLS11_RS09080 PF08442 ATP-grasp domain AMBLS11_RS09085 PF02629 CoA binding domain AMBLS11_RS09085 PF00549 CoA-ligase AMBLS11_RS09095 PF04820 Tryptophan halogenase AMBLS11_RS09105 PF18494 Pullulanase Ins domain AMBLS11_RS09105 PF11852 Domain of unknown function (DUF3372) AMBLS11_RS09105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMBLS11_RS09105 PF17967 Pullulanase N2 domain AMBLS11_RS09105 PF03714 Bacterial pullanase-associated domain AMBLS11_RS09110 PF01734 Patatin-like phospholipase AMBLS11_RS09125 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS09125 PF01548 Transposase AMBLS11_RS09130 PF02903 Alpha amylase, N-terminal ig-like domain AMBLS11_RS09130 PF16657 Maltogenic Amylase, C-terminal domain AMBLS11_RS09130 PF00128 Alpha amylase, catalytic domain AMBLS11_RS09135 PF10438 Cyclo-malto-dextrinase C-terminal domain AMBLS11_RS09135 PF09087 Cyclomaltodextrinase, N-terminal AMBLS11_RS09135 PF00128 Alpha amylase, catalytic domain AMBLS11_RS09145 PF01833 IPT/TIG domain AMBLS11_RS09145 PF00686 Starch binding domain AMBLS11_RS09145 PF00128 Alpha amylase, catalytic domain AMBLS11_RS09145 PF02806 Alpha amylase, C-terminal all-beta domain AMBLS11_RS09150 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS09155 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMBLS11_RS09155 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMBLS11_RS09160 PF01548 Transposase AMBLS11_RS09160 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS09165 PF00106 short chain dehydrogenase AMBLS11_RS09170 PF12262 Bacterial virulence factor lipase N-terminal AMBLS11_RS09175 PF01804 Penicillin amidase AMBLS11_RS09180 PF08496 Peptidase family S49 N-terminal AMBLS11_RS09180 PF01343 Peptidase family S49 AMBLS11_RS09195 PF01784 NIF3 (NGG1p interacting factor 3) AMBLS11_RS09200 PF13847 Methyltransferase domain AMBLS11_RS09205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBLS11_RS09205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBLS11_RS09210 PF00255 Glutathione peroxidase AMBLS11_RS09215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMBLS11_RS09215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBLS11_RS09225 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS09225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS09225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS09230 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS09235 PF13847 Methyltransferase domain AMBLS11_RS09245 PF00884 Sulfatase AMBLS11_RS09245 PF11893 Domain of unknown function (DUF3413) AMBLS11_RS09250 PF07208 Protein of unknown function (DUF1414) AMBLS11_RS09255 PF04245 37-kD nucleoid-associated bacterial protein AMBLS11_RS09265 PF01551 Peptidase family M23 AMBLS11_RS09265 PF10145 Phage-related minor tail protein AMBLS11_RS09265 PF01464 Transglycosylase SLT domain AMBLS11_RS09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS09285 PF06580 Histidine kinase AMBLS11_RS09285 PF07694 5TMR of 5TMR-LYT AMBLS11_RS09290 PF04397 LytTr DNA-binding domain AMBLS11_RS09290 PF00072 Response regulator receiver domain AMBLS11_RS09295 PF00365 Phosphofructokinase AMBLS11_RS09305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS09305 PF03466 LysR substrate binding domain AMBLS11_RS09310 PF00106 short chain dehydrogenase AMBLS11_RS09320 PF00107 Zinc-binding dehydrogenase AMBLS11_RS09320 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS09330 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBLS11_RS09330 PF00072 Response regulator receiver domain AMBLS11_RS09330 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS09330 PF01627 Hpt domain AMBLS11_RS09330 PF00989 PAS fold AMBLS11_RS09340 PF17773 UPF0176 acylphosphatase like domain AMBLS11_RS09340 PF00581 Rhodanese-like domain AMBLS11_RS09360 PF00270 DEAD/DEAH box helicase AMBLS11_RS09360 PF00271 Helicase conserved C-terminal domain AMBLS11_RS09365 PF01144 Coenzyme A transferase AMBLS11_RS09370 PF01144 Coenzyme A transferase AMBLS11_RS09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS09375 PF03466 LysR substrate binding domain AMBLS11_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS09390 PF03466 LysR substrate binding domain AMBLS11_RS09395 PF03313 Serine dehydratase alpha chain AMBLS11_RS09395 PF03315 Serine dehydratase beta chain AMBLS11_RS09400 PF00293 NUDIX domain AMBLS11_RS09405 PF00425 chorismate binding enzyme AMBLS11_RS09405 PF04715 Anthranilate synthase component I, N terminal region AMBLS11_RS09415 PF02646 RmuC family AMBLS11_RS09420 PF02225 PA domain AMBLS11_RS09420 PF05922 Peptidase inhibitor I9 AMBLS11_RS09420 PF13860 FlgD Ig-like domain AMBLS11_RS09420 PF00082 Subtilase family AMBLS11_RS09425 PF00676 Dehydrogenase E1 component AMBLS11_RS09430 PF02779 Transketolase, pyrimidine binding domain AMBLS11_RS09430 PF02780 Transketolase, C-terminal domain AMBLS11_RS09435 PF02817 e3 binding domain AMBLS11_RS09435 PF00364 Biotin-requiring enzyme AMBLS11_RS09435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMBLS11_RS09440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMBLS11_RS09445 PF00069 Protein kinase domain AMBLS11_RS09455 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS09460 PF00266 Aminotransferase class-V AMBLS11_RS09470 PF13185 GAF domain AMBLS11_RS09480 PF04352 ProQ/FINO family AMBLS11_RS09480 PF17516 ProQ C-terminal domain AMBLS11_RS09485 PF11818 C-terminal domain of tail specific protease (DUF3340) AMBLS11_RS09485 PF00595 PDZ domain AMBLS11_RS09485 PF17804 Tail specific protease N-terminal domain AMBLS11_RS09485 PF03572 Peptidase family S41 AMBLS11_RS09490 PF00209 Sodium:neurotransmitter symporter family AMBLS11_RS09495 PF03553 Na+/H+ antiporter family AMBLS11_RS09500 PF01433 Peptidase family M1 domain AMBLS11_RS09500 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AMBLS11_RS09500 PF11940 Domain of unknown function (DUF3458) Ig-like fold AMBLS11_RS09515 PF07044 Protein of unknown function (DUF1329) AMBLS11_RS09530 PF05088 Bacterial NAD-glutamate dehydrogenase AMBLS11_RS09535 PF01180 Dihydroorotate dehydrogenase AMBLS11_RS09540 PF10672 S-adenosylmethionine-dependent methyltransferase AMBLS11_RS09540 PF02926 THUMP domain AMBLS11_RS09540 PF01170 Putative RNA methylase family UPF0020 AMBLS11_RS09550 PF00005 ABC transporter AMBLS11_RS09550 PF12848 ABC transporter AMBLS11_RS09550 PF16326 ABC transporter C-terminal domain AMBLS11_RS09560 PF04957 Ribosome modulation factor AMBLS11_RS09565 PF07977 FabA-like domain AMBLS11_RS09575 PF00875 DNA photolyase AMBLS11_RS09575 PF03441 FAD binding domain of DNA photolyase AMBLS11_RS09580 PF03441 FAD binding domain of DNA photolyase AMBLS11_RS09580 PF00875 DNA photolyase AMBLS11_RS09585 PF03441 FAD binding domain of DNA photolyase AMBLS11_RS09585 PF00875 DNA photolyase AMBLS11_RS09590 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AMBLS11_RS09600 PF00753 Metallo-beta-lactamase superfamily AMBLS11_RS09600 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMBLS11_RS09605 PF02899 Phage integrase, N-terminal SAM-like domain AMBLS11_RS09605 PF00589 Phage integrase family AMBLS11_RS09615 PF01219 Prokaryotic diacylglycerol kinase AMBLS11_RS09620 PF00582 Universal stress protein family AMBLS11_RS09630 PF01645 Conserved region in glutamate synthase AMBLS11_RS09635 PF00999 Sodium/hydrogen exchanger family AMBLS11_RS09640 PF00210 Ferritin-like domain AMBLS11_RS09645 PF00210 Ferritin-like domain AMBLS11_RS09655 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMBLS11_RS09670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMBLS11_RS09670 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMBLS11_RS09680 PF00403 Heavy-metal-associated domain AMBLS11_RS09695 PF13545 Crp-like helix-turn-helix domain AMBLS11_RS09695 PF00027 Cyclic nucleotide-binding domain AMBLS11_RS09700 PF00582 Universal stress protein family AMBLS11_RS09705 PF01171 PP-loop family AMBLS11_RS09710 PF01734 Patatin-like phospholipase AMBLS11_RS09730 PF01810 LysE type translocator AMBLS11_RS09735 PF02146 Sir2 family AMBLS11_RS09740 PF00581 Rhodanese-like domain AMBLS11_RS09745 PF08534 Redoxin AMBLS11_RS09750 PF03942 DTW domain AMBLS11_RS09755 PF00563 EAL domain AMBLS11_RS09755 PF12792 CSS motif domain associated with EAL AMBLS11_RS09775 PF00589 Phage integrase family AMBLS11_RS09780 PF04002 RadC-like JAB domain AMBLS11_RS09840 PF00589 Phage integrase family AMBLS11_RS09840 PF13356 Arm DNA-binding domain AMBLS11_RS09860 PF01066 CDP-alcohol phosphatidyltransferase AMBLS11_RS09865 PF08459 UvrC Helix-hairpin-helix N-terminal AMBLS11_RS09865 PF01541 GIY-YIG catalytic domain AMBLS11_RS09865 PF02151 UvrB/uvrC motif AMBLS11_RS09870 PF00072 Response regulator receiver domain AMBLS11_RS09870 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS09875 PF02678 Pirin AMBLS11_RS09875 PF17954 Quercetinase C-terminal cupin domain AMBLS11_RS09880 PF00155 Aminotransferase class I and II AMBLS11_RS09900 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMBLS11_RS09905 PF07681 DoxX AMBLS11_RS09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS09910 PF03466 LysR substrate binding domain AMBLS11_RS09935 PF01027 Inhibitor of apoptosis-promoting Bax1 AMBLS11_RS09940 PF02635 DsrE/DsrF-like family AMBLS11_RS09955 PF04358 DsrC like protein AMBLS11_RS09980 PF00593 TonB dependent receptor AMBLS11_RS09980 PF00593 TonB dependent receptor AMBLS11_RS09980 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS09980 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS09985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMBLS11_RS09985 PF02403 Seryl-tRNA synthetase N-terminal domain AMBLS11_RS09990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMBLS11_RS09995 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS09995 PF16193 AAA C-terminal domain AMBLS11_RS09995 PF12002 MgsA AAA+ ATPase C terminal AMBLS11_RS10005 PF01580 FtsK/SpoIIIE family AMBLS11_RS10005 PF09397 Ftsk gamma domain AMBLS11_RS10005 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMBLS11_RS10005 PF17854 FtsK alpha domain AMBLS11_RS10010 PF01037 Lrp/AsnC ligand binding domain AMBLS11_RS10015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMBLS11_RS10015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMBLS11_RS10020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMBLS11_RS10025 PF18073 Rubredoxin metal binding domain AMBLS11_RS10040 PF00216 Bacterial DNA-binding protein AMBLS11_RS10045 PF00575 S1 RNA binding domain AMBLS11_RS10050 PF02224 Cytidylate kinase AMBLS11_RS10055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMBLS11_RS10060 PF00266 Aminotransferase class-V AMBLS11_RS10065 PF00521 DNA gyrase/topoisomerase IV, subunit A AMBLS11_RS10065 PF03989 DNA gyrase C-terminal domain, beta-propeller AMBLS11_RS10075 PF03477 ATP cone domain AMBLS11_RS10075 PF00317 Ribonucleotide reductase, all-alpha domain AMBLS11_RS10075 PF02867 Ribonucleotide reductase, barrel domain AMBLS11_RS10080 PF00268 Ribonucleotide reductase, small chain AMBLS11_RS10085 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS10100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS10100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBLS11_RS10105 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS10105 PF00563 EAL domain AMBLS11_RS10105 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS10110 PF00892 EamA-like transporter family AMBLS11_RS10115 PF01259 SAICAR synthetase AMBLS11_RS10120 PF06804 NlpB/DapX lipoprotein AMBLS11_RS10125 PF00701 Dihydrodipicolinate synthetase family AMBLS11_RS10135 PF00578 AhpC/TSA family AMBLS11_RS10140 PF01594 AI-2E family transporter AMBLS11_RS10145 PF01435 Peptidase family M48 AMBLS11_RS10155 PF03960 ArsC family AMBLS11_RS10160 PF03358 NADPH-dependent FMN reductase AMBLS11_RS10180 PF00308 Bacterial dnaA protein AMBLS11_RS10190 PF00586 AIR synthase related protein, N-terminal domain AMBLS11_RS10190 PF02769 AIR synthase related protein, C-terminal domain AMBLS11_RS10195 PF00551 Formyl transferase AMBLS11_RS10205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS10205 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS10205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS10205 PF09317 Domain of unknown function (DUF1974) AMBLS11_RS10215 PF00072 Response regulator receiver domain AMBLS11_RS10215 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS10220 PF13649 Methyltransferase domain AMBLS11_RS10225 PF08003 Protein of unknown function (DUF1698) AMBLS11_RS10245 PF00128 Alpha amylase, catalytic domain AMBLS11_RS10250 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS10255 PF03453 MoeA N-terminal region (domain I and II) AMBLS11_RS10255 PF03454 MoeA C-terminal region (domain IV) AMBLS11_RS10255 PF00994 Probable molybdopterin binding domain AMBLS11_RS10260 PF01554 MatE AMBLS11_RS10265 PF12804 MobA-like NTP transferase domain AMBLS11_RS10275 PF01434 Peptidase family M41 AMBLS11_RS10275 PF17862 AAA+ lid domain AMBLS11_RS10275 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS10280 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS10340 PF01548 Transposase AMBLS11_RS10340 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS10495 PF02567 Phenazine biosynthesis-like protein AMBLS11_RS10505 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS10520 PF00255 Glutathione peroxidase AMBLS11_RS10525 PF02525 Flavodoxin-like fold AMBLS11_RS10535 PF01053 Cys/Met metabolism PLP-dependent enzyme AMBLS11_RS10550 PF00155 Aminotransferase class I and II AMBLS11_RS10555 PF10459 Peptidase S46 AMBLS11_RS10565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMBLS11_RS10580 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMBLS11_RS10580 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS10580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS10580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS10585 PF12833 Helix-turn-helix domain AMBLS11_RS10585 PF07883 Cupin domain AMBLS11_RS10590 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS10590 PF00593 TonB dependent receptor AMBLS11_RS10600 PF00326 Prolyl oligopeptidase family AMBLS11_RS10600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMBLS11_RS10605 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS10610 PF13533 Biotin-lipoyl like AMBLS11_RS10620 PF01012 Electron transfer flavoprotein domain AMBLS11_RS10620 PF00766 Electron transfer flavoprotein FAD-binding domain AMBLS11_RS10625 PF01012 Electron transfer flavoprotein domain AMBLS11_RS10640 PF00561 alpha/beta hydrolase fold AMBLS11_RS10650 PF00258 Flavodoxin AMBLS11_RS10655 PF00672 HAMP domain AMBLS11_RS10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS10660 PF01475 Ferric uptake regulator family AMBLS11_RS10665 PF01063 Amino-transferase class IV AMBLS11_RS10670 PF02626 Carboxyltransferase domain, subdomain A and B AMBLS11_RS10675 PF02682 Carboxyltransferase domain, subdomain C and D AMBLS11_RS10680 PF03746 LamB/YcsF family AMBLS11_RS10685 PF17783 CvfB-like winged helix domain AMBLS11_RS10685 PF13509 S1 domain AMBLS11_RS10690 PF02566 OsmC-like protein AMBLS11_RS10695 PF13533 Biotin-lipoyl like AMBLS11_RS10700 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS10705 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS10720 PF00155 Aminotransferase class I and II AMBLS11_RS10730 PF13286 Phosphohydrolase-associated domain AMBLS11_RS10730 PF01966 HD domain AMBLS11_RS10740 PF00174 Oxidoreductase molybdopterin binding domain AMBLS11_RS10745 PF01794 Ferric reductase like transmembrane component AMBLS11_RS10760 PF02810 SEC-C motif AMBLS11_RS10765 PF00128 Alpha amylase, catalytic domain AMBLS11_RS10775 PF00107 Zinc-binding dehydrogenase AMBLS11_RS10775 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS10785 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS10785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS10785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS10800 PF00593 TonB dependent receptor AMBLS11_RS10800 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS10820 PF04055 Radical SAM superfamily AMBLS11_RS10820 PF06969 HemN C-terminal domain AMBLS11_RS10825 PF00005 ABC transporter AMBLS11_RS10825 PF03459 TOBE domain AMBLS11_RS10830 PF00528 Binding-protein-dependent transport system inner membrane component AMBLS11_RS10840 PF02391 MoaE protein AMBLS11_RS10845 PF02597 ThiS family AMBLS11_RS10850 PF01967 MoaC family AMBLS11_RS10855 PF00994 Probable molybdopterin binding domain AMBLS11_RS10860 PF00899 ThiF family AMBLS11_RS10880 PF16325 Peptidase family U32 C-terminal domain AMBLS11_RS10880 PF01136 Peptidase family U32 AMBLS11_RS10885 PF00037 4Fe-4S binding domain AMBLS11_RS10890 PF00155 Aminotransferase class I and II AMBLS11_RS10895 PF03435 Saccharopine dehydrogenase NADP binding domain AMBLS11_RS10900 PF00155 Aminotransferase class I and II AMBLS11_RS10920 PF01717 Cobalamin-independent synthase, Catalytic domain AMBLS11_RS10920 PF08267 Cobalamin-independent synthase, N-terminal domain AMBLS11_RS10925 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS10925 PF00593 TonB dependent receptor AMBLS11_RS10935 PF00892 EamA-like transporter family AMBLS11_RS10955 PF01810 LysE type translocator AMBLS11_RS10960 PF00392 Bacterial regulatory proteins, gntR family AMBLS11_RS10960 PF00155 Aminotransferase class I and II AMBLS11_RS10970 PF13538 UvrD-like helicase C-terminal domain AMBLS11_RS10975 PF12705 PD-(D/E)XK nuclease superfamily AMBLS11_RS10975 PF13361 UvrD-like helicase C-terminal domain AMBLS11_RS10975 PF00580 UvrD/REP helicase N-terminal domain AMBLS11_RS10980 PF17946 RecC C-terminal domain AMBLS11_RS10990 PF00501 AMP-binding enzyme AMBLS11_RS10995 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS10995 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS10995 PF00563 EAL domain AMBLS11_RS11000 PF17770 Ribonuclease J C-terminal domain AMBLS11_RS11000 PF12706 Beta-lactamase superfamily domain AMBLS11_RS11000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMBLS11_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS11015 PF03466 LysR substrate binding domain AMBLS11_RS11030 PF01022 Bacterial regulatory protein, arsR family AMBLS11_RS11040 PF03466 LysR substrate binding domain AMBLS11_RS11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS11050 PF00158 Sigma-54 interaction domain AMBLS11_RS11050 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS11050 PF00072 Response regulator receiver domain AMBLS11_RS11060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS11060 PF01590 GAF domain AMBLS11_RS11060 PF00360 Phytochrome region AMBLS11_RS11060 PF08446 PAS fold AMBLS11_RS11060 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS11065 PF00072 Response regulator receiver domain AMBLS11_RS11070 PF09308 LuxQ, periplasmic AMBLS11_RS11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS11070 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS11070 PF00072 Response regulator receiver domain AMBLS11_RS11095 PF01965 DJ-1/PfpI family AMBLS11_RS11120 PF07023 Protein of unknown function (DUF1315) AMBLS11_RS11130 PF01235 Sodium:alanine symporter family AMBLS11_RS11135 PF18027 Cytosolic carboxypeptidase N-terminal domain AMBLS11_RS11135 PF00246 Zinc carboxypeptidase AMBLS11_RS11140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMBLS11_RS11140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_RS11150 PF01641 SelR domain AMBLS11_RS11155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBLS11_RS11155 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMBLS11_RS11160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMBLS11_RS11160 PF00128 Alpha amylase, catalytic domain AMBLS11_RS11165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMBLS11_RS11165 PF02806 Alpha amylase, C-terminal all-beta domain AMBLS11_RS11165 PF00128 Alpha amylase, catalytic domain AMBLS11_RS11170 PF02446 4-alpha-glucanotransferase AMBLS11_RS11175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMBLS11_RS11175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMBLS11_RS11180 PF01263 Aldose 1-epimerase AMBLS11_RS11190 PF01081 KDPG and KHG aldolase AMBLS11_RS11195 PF02685 Glucokinase AMBLS11_RS11200 PF00920 Dehydratase family AMBLS11_RS11205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMBLS11_RS11210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMBLS11_RS11210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMBLS11_RS11215 PF01380 SIS domain AMBLS11_RS11215 PF01418 Helix-turn-helix domain, rpiR family AMBLS11_RS11220 PF02887 Pyruvate kinase, alpha/beta domain AMBLS11_RS11220 PF00224 Pyruvate kinase, barrel domain AMBLS11_RS11225 PF01048 Phosphorylase superfamily AMBLS11_RS11245 PF04972 BON domain AMBLS11_RS11270 PF09347 Domain of unknown function (DUF1989) AMBLS11_RS11295 PF04962 KduI/IolB family AMBLS11_RS11300 PF03480 Bacterial extracellular solute-binding protein, family 7 AMBLS11_RS11305 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMBLS11_RS11310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMBLS11_RS11315 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS11320 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMBLS11_RS11320 PF08666 SAF domain AMBLS11_RS11325 PF02614 Glucuronate isomerase AMBLS11_RS11330 PF01232 Mannitol dehydrogenase Rossmann domain AMBLS11_RS11330 PF08125 Mannitol dehydrogenase C-terminal domain AMBLS11_RS11335 PF01081 KDPG and KHG aldolase AMBLS11_RS11340 PF00294 pfkB family carbohydrate kinase AMBLS11_RS11345 PF13472 GDSL-like Lipase/Acylhydrolase family AMBLS11_RS11360 PF07470 Glycosyl Hydrolase Family 88 AMBLS11_RS11365 PF00295 Glycosyl hydrolases family 28 AMBLS11_RS11370 PF01095 Pectinesterase AMBLS11_RS11375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS11375 PF00072 Response regulator receiver domain AMBLS11_RS11375 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS11375 PF01627 Hpt domain AMBLS11_RS11375 PF00672 HAMP domain AMBLS11_RS11375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS11390 PF04231 Endonuclease I AMBLS11_RS11395 PF01433 Peptidase family M1 domain AMBLS11_RS11395 PF11838 ERAP1-like C-terminal domain AMBLS11_RS11400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS11400 PF00672 HAMP domain AMBLS11_RS11400 PF02743 Cache domain AMBLS11_RS11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS11415 PF03466 LysR substrate binding domain AMBLS11_RS11420 PF01965 DJ-1/PfpI family AMBLS11_RS11425 PF00465 Iron-containing alcohol dehydrogenase AMBLS11_RS11435 PF00881 Nitroreductase family AMBLS11_RS11440 PF11849 Domain of unknown function (DUF3369) AMBLS11_RS11445 PF08448 PAS fold AMBLS11_RS11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS11445 PF08447 PAS fold AMBLS11_RS11450 PF12697 Alpha/beta hydrolase family AMBLS11_RS11455 PF00561 alpha/beta hydrolase fold AMBLS11_RS11465 PF02627 Carboxymuconolactone decarboxylase family AMBLS11_RS11485 PF00939 Sodium:sulfate symporter transmembrane region AMBLS11_RS11490 PF00692 dUTPase AMBLS11_RS11495 PF10609 NUBPL iron-transfer P-loop NTPase AMBLS11_RS11500 PF01588 Putative tRNA binding domain AMBLS11_RS11500 PF08264 Anticodon-binding domain of tRNA AMBLS11_RS11500 PF09334 tRNA synthetases class I (M) AMBLS11_RS11505 PF05552 Conserved TM helix AMBLS11_RS11505 PF00924 Mechanosensitive ion channel AMBLS11_RS11510 PF08241 Methyltransferase domain AMBLS11_RS11515 PF00753 Metallo-beta-lactamase superfamily AMBLS11_RS11515 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMBLS11_RS11520 PF01464 Transglycosylase SLT domain AMBLS11_RS11520 PF01476 LysM domain AMBLS11_RS11535 PF09190 DALR domain AMBLS11_RS11535 PF01406 tRNA synthetases class I (C) catalytic domain AMBLS11_RS11540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMBLS11_RS11545 PF00149 Calcineurin-like phosphoesterase AMBLS11_RS11555 PF15975 Flotillin AMBLS11_RS11555 PF01145 SPFH domain / Band 7 family AMBLS11_RS11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS11560 PF03466 LysR substrate binding domain AMBLS11_RS11575 PF00128 Alpha amylase, catalytic domain AMBLS11_RS11580 PF01638 HxlR-like helix-turn-helix AMBLS11_RS11585 PF00107 Zinc-binding dehydrogenase AMBLS11_RS11585 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS11595 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS11595 PF00107 Zinc-binding dehydrogenase AMBLS11_RS11615 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AMBLS11_RS11625 PF00156 Phosphoribosyl transferase domain AMBLS11_RS11630 PF02674 Colicin V production protein AMBLS11_RS11635 PF05036 Sporulation related domain AMBLS11_RS11640 PF08245 Mur ligase middle domain AMBLS11_RS11640 PF02875 Mur ligase family, glutamate ligase domain AMBLS11_RS11645 PF01039 Carboxyl transferase domain AMBLS11_RS11645 PF17848 Acetyl-coA carboxylase zinc finger domain AMBLS11_RS11650 PF01416 tRNA pseudouridine synthase AMBLS11_RS11660 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMBLS11_RS11660 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMBLS11_RS11665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBLS11_RS11665 PF11890 Domain of unknown function (DUF3410) AMBLS11_RS11665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBLS11_RS11670 PF00596 Class II Aldolase and Adducin N-terminal domain AMBLS11_RS11685 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AMBLS11_RS11690 PF00109 Beta-ketoacyl synthase, N-terminal domain AMBLS11_RS11690 PF02801 Beta-ketoacyl synthase, C-terminal domain AMBLS11_RS11695 PF00501 AMP-binding enzyme AMBLS11_RS11695 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS11700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMBLS11_RS11700 PF01266 FAD dependent oxidoreductase AMBLS11_RS11720 PF00005 ABC transporter AMBLS11_RS11725 PF02667 Short chain fatty acid transporter AMBLS11_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS11730 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS11730 PF00672 HAMP domain AMBLS11_RS11730 PF00072 Response regulator receiver domain AMBLS11_RS11730 PF01627 Hpt domain AMBLS11_RS11730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS11735 PF02627 Carboxymuconolactone decarboxylase family AMBLS11_RS11740 PF00675 Insulinase (Peptidase family M16) AMBLS11_RS11740 PF05193 Peptidase M16 inactive domain AMBLS11_RS11755 PF04315 Elongation factor P hydroxylase AMBLS11_RS11780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS11780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBLS11_RS11785 PF00378 Enoyl-CoA hydratase/isomerase AMBLS11_RS11790 PF02909 Tetracyclin repressor-like, C-terminal domain AMBLS11_RS11790 PF00440 Bacterial regulatory proteins, tetR family AMBLS11_RS11795 PF00732 GMC oxidoreductase AMBLS11_RS11795 PF05199 GMC oxidoreductase AMBLS11_RS11805 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AMBLS11_RS11805 PF06974 Protein of unknown function (DUF1298) AMBLS11_RS11815 PF04286 Protein of unknown function (DUF445) AMBLS11_RS11840 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMBLS11_RS11840 PF00326 Prolyl oligopeptidase family AMBLS11_RS11845 PF00392 Bacterial regulatory proteins, gntR family AMBLS11_RS11845 PF07840 FadR C-terminal domain AMBLS11_RS11850 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AMBLS11_RS11855 PF02600 Disulfide bond formation protein DsbB AMBLS11_RS11860 PF13302 Acetyltransferase (GNAT) domain AMBLS11_RS11865 PF03692 Putative zinc- or iron-chelating domain AMBLS11_RS11870 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMBLS11_RS11880 PF05166 YcgL domain AMBLS11_RS11885 PF00570 HRDC domain AMBLS11_RS11885 PF01612 3'-5' exonuclease AMBLS11_RS11890 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS11890 PF00501 AMP-binding enzyme AMBLS11_RS11895 PF12697 Alpha/beta hydrolase family AMBLS11_RS11910 PF00814 Glycoprotease family AMBLS11_RS11915 PF13307 Helicase C-terminal domain AMBLS11_RS11915 PF06733 DEAD_2 AMBLS11_RS11940 PF01569 PAP2 superfamily AMBLS11_RS11965 PF00128 Alpha amylase, catalytic domain AMBLS11_RS12000 PF08029 HisG, C-terminal domain AMBLS11_RS12000 PF01634 ATP phosphoribosyltransferase AMBLS11_RS12005 PF00815 Histidinol dehydrogenase AMBLS11_RS12010 PF00155 Aminotransferase class I and II AMBLS11_RS12015 PF00475 Imidazoleglycerol-phosphate dehydratase AMBLS11_RS12020 PF00117 Glutamine amidotransferase class-I AMBLS11_RS12025 PF00977 Histidine biosynthesis protein AMBLS11_RS12030 PF00977 Histidine biosynthesis protein AMBLS11_RS12035 PF01502 Phosphoribosyl-AMP cyclohydrolase AMBLS11_RS12035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMBLS11_RS12045 PF01226 Formate/nitrite transporter AMBLS11_RS12050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS12050 PF00672 HAMP domain AMBLS11_RS12055 PF00675 Insulinase (Peptidase family M16) AMBLS11_RS12055 PF05193 Peptidase M16 inactive domain AMBLS11_RS12060 PF10502 Signal peptidase, peptidase S26 AMBLS11_RS12065 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS12065 PF00593 TonB dependent receptor AMBLS11_RS12075 PF05191 Adenylate kinase, active site lid AMBLS11_RS12080 PF00183 Hsp90 protein AMBLS11_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS12085 PF02132 RecR protein AMBLS11_RS12085 PF13662 Toprim domain AMBLS11_RS12100 PF02463 RecF/RecN/SMC N terminal domain AMBLS11_RS12145 PF12167 Arm DNA-binding domain AMBLS11_RS12145 PF00589 Phage integrase family AMBLS11_RS12150 PF03203 MerC mercury resistance protein AMBLS11_RS12155 PF09278 MerR, DNA binding AMBLS11_RS12155 PF00376 MerR family regulatory protein AMBLS11_RS12160 PF02575 YbaB/EbfC DNA-binding family AMBLS11_RS12165 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMBLS11_RS12165 PF12170 DNA polymerase III tau subunit V interacting with alpha AMBLS11_RS12165 PF12169 DNA polymerase III subunits gamma and tau domain III AMBLS11_RS12170 PF00156 Phosphoribosyl transferase domain AMBLS11_RS12180 PF05114 Protein of unknown function (DUF692) AMBLS11_RS12190 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS12200 PF00360 Phytochrome region AMBLS11_RS12200 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS12200 PF00563 EAL domain AMBLS11_RS12200 PF01590 GAF domain AMBLS11_RS12240 PF01066 CDP-alcohol phosphatidyltransferase AMBLS11_RS12260 PF09330 D-lactate dehydrogenase, membrane binding AMBLS11_RS12260 PF01565 FAD binding domain AMBLS11_RS12270 PF13333 Integrase core domain AMBLS11_RS12270 PF00665 Integrase core domain AMBLS11_RS12270 PF13276 HTH-like domain AMBLS11_RS12275 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS12275 PF02861 Clp amino terminal domain, pathogenicity island component AMBLS11_RS12275 PF10431 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS12275 PF17871 AAA lid domain AMBLS11_RS12275 PF07724 AAA domain (Cdc48 subfamily) AMBLS11_RS12280 PF02578 Multi-copper polyphenol oxidoreductase laccase AMBLS11_RS12285 PF01479 S4 domain AMBLS11_RS12285 PF00849 RNA pseudouridylate synthase AMBLS11_RS12290 PF13525 Outer membrane lipoprotein AMBLS11_RS12300 PF04542 Sigma-70 region 2 AMBLS11_RS12300 PF04545 Sigma-70, region 4 AMBLS11_RS12315 PF00106 short chain dehydrogenase AMBLS11_RS12335 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMBLS11_RS12335 PF00691 OmpA family AMBLS11_RS12340 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS12345 PF02609 Exonuclease VII small subunit AMBLS11_RS12350 PF00348 Polyprenyl synthetase AMBLS11_RS12355 PF02779 Transketolase, pyrimidine binding domain AMBLS11_RS12355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMBLS11_RS12355 PF02780 Transketolase, C-terminal domain AMBLS11_RS12360 PF04608 Phosphatidylglycerophosphatase A AMBLS11_RS12365 PF02769 AIR synthase related protein, C-terminal domain AMBLS11_RS12365 PF00586 AIR synthase related protein, N-terminal domain AMBLS11_RS12370 PF01029 NusB family AMBLS11_RS12375 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMBLS11_RS12380 PF00925 GTP cyclohydrolase II AMBLS11_RS12380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMBLS11_RS12385 PF00677 Lumazine binding domain AMBLS11_RS12390 PF01872 RibD C-terminal domain AMBLS11_RS12390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMBLS11_RS12395 PF03477 ATP cone domain AMBLS11_RS12400 PF00464 Serine hydroxymethyltransferase AMBLS11_RS12405 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMBLS11_RS12405 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS12410 PF12848 ABC transporter AMBLS11_RS12410 PF00005 ABC transporter AMBLS11_RS12420 PF18073 Rubredoxin metal binding domain AMBLS11_RS12430 PF18429 Domain of unknown function (DUF5609) AMBLS11_RS12440 PF01026 TatD related DNase AMBLS11_RS12445 PF01243 Pyridoxamine 5'-phosphate oxidase AMBLS11_RS12445 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMBLS11_RS12450 PF01926 50S ribosome-binding GTPase AMBLS11_RS12450 PF07650 KH domain AMBLS11_RS12455 PF14622 Ribonuclease-III-like AMBLS11_RS12455 PF00035 Double-stranded RNA binding motif AMBLS11_RS12460 PF10502 Signal peptidase, peptidase S26 AMBLS11_RS12465 PF06421 GTP-binding protein LepA C-terminus AMBLS11_RS12465 PF03144 Elongation factor Tu domain 2 AMBLS11_RS12465 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS12465 PF00679 Elongation factor G C-terminus AMBLS11_RS12565 PF00436 Single-strand binding protein family AMBLS11_RS12730 PF17188 MucB/RseB C-terminal domain AMBLS11_RS12730 PF03888 MucB/RseB N-terminal domain AMBLS11_RS12740 PF04542 Sigma-70 region 2 AMBLS11_RS12740 PF08281 Sigma-70, region 4 AMBLS11_RS12745 PF00890 FAD binding domain AMBLS11_RS12745 PF02910 Fumarate reductase flavoprotein C-term AMBLS11_RS12760 PF03937 Flavinator of succinate dehydrogenase AMBLS11_RS12770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBLS11_RS12775 PF00543 Nitrogen regulatory protein P-II AMBLS11_RS12780 PF02540 NAD synthase AMBLS11_RS12795 PF14245 Type IV pilin PilA AMBLS11_RS12795 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS12815 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS12815 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMBLS11_RS12840 PF02401 LytB protein AMBLS11_RS12845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBLS11_RS12850 PF01252 Signal peptidase (SPase) II AMBLS11_RS12855 PF00133 tRNA synthetases class I (I, L, M and V) AMBLS11_RS12855 PF08264 Anticodon-binding domain of tRNA AMBLS11_RS12855 PF06827 Zinc finger found in FPG and IleRS AMBLS11_RS12860 PF06574 FAD synthetase AMBLS11_RS12860 PF01687 Riboflavin kinase AMBLS11_RS12865 PF03023 Lipid II flippase MurJ AMBLS11_RS12870 PF01649 Ribosomal protein S20 AMBLS11_RS12875 PF00106 short chain dehydrogenase AMBLS11_RS12885 PF00106 short chain dehydrogenase AMBLS11_RS12890 PF01758 Sodium Bile acid symporter family AMBLS11_RS12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS12895 PF03466 LysR substrate binding domain AMBLS11_RS12910 PF01546 Peptidase family M20/M25/M40 AMBLS11_RS12910 PF07687 Peptidase dimerisation domain AMBLS11_RS12925 PF00216 Bacterial DNA-binding protein AMBLS11_RS12930 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMBLS11_RS12930 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS12930 PF05362 Lon protease (S16) C-terminal proteolytic domain AMBLS11_RS12935 PF10431 C-terminal, D2-small domain, of ClpB protein AMBLS11_RS12935 PF06689 ClpX C4-type zinc finger AMBLS11_RS12935 PF07724 AAA domain (Cdc48 subfamily) AMBLS11_RS12940 PF00574 Clp protease AMBLS11_RS12945 PF05697 Bacterial trigger factor protein (TF) AMBLS11_RS12945 PF05698 Bacterial trigger factor protein (TF) C-terminus AMBLS11_RS12945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBLS11_RS12990 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMBLS11_RS12990 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMBLS11_RS13000 PF01980 tRNA-methyltransferase O AMBLS11_RS13000 PF18389 TrmO C-terminal domain AMBLS11_RS13005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMBLS11_RS13005 PF03129 Anticodon binding domain AMBLS11_RS13015 PF02253 Phospholipase A1 AMBLS11_RS13020 PF00850 Histone deacetylase domain AMBLS11_RS13025 PF00672 HAMP domain AMBLS11_RS13025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS13040 PF02540 NAD synthase AMBLS11_RS13040 PF00958 GMP synthase C terminal domain AMBLS11_RS13040 PF00117 Glutamine amidotransferase class-I AMBLS11_RS13045 PF00571 CBS domain AMBLS11_RS13045 PF00478 IMP dehydrogenase / GMP reductase domain AMBLS11_RS13050 PF02601 Exonuclease VII, large subunit AMBLS11_RS13050 PF13742 OB-fold nucleic acid binding domain AMBLS11_RS13070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMBLS11_RS13070 PF01926 50S ribosome-binding GTPase AMBLS11_RS13075 PF13360 PQQ-like domain AMBLS11_RS13080 PF09976 Tetratricopeptide repeat-like domain AMBLS11_RS13085 PF13393 Histidyl-tRNA synthetase AMBLS11_RS13085 PF03129 Anticodon binding domain AMBLS11_RS13090 PF04551 GcpE protein AMBLS11_RS13095 PF13464 Domain of unknown function (DUF4115) AMBLS11_RS13105 PF04055 Radical SAM superfamily AMBLS11_RS13115 PF00334 Nucleoside diphosphate kinase AMBLS11_RS13120 PF02657 Fe-S metabolism associated domain AMBLS11_RS13125 PF01883 Iron-sulfur cluster assembly protein AMBLS11_RS13130 PF01521 Iron-sulphur cluster biosynthesis AMBLS11_RS13135 PF00266 Aminotransferase class-V AMBLS11_RS13140 PF01458 Uncharacterized protein family (UPF0051) AMBLS11_RS13145 PF00005 ABC transporter AMBLS11_RS13150 PF01458 Uncharacterized protein family (UPF0051) AMBLS11_RS13155 PF00266 Aminotransferase class-V AMBLS11_RS13160 PF02082 Transcriptional regulator AMBLS11_RS13175 PF06426 Serine acetyltransferase, N-terminal AMBLS11_RS13175 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS13180 PF00588 SpoU rRNA Methylase family AMBLS11_RS13185 PF00459 Inositol monophosphatase family AMBLS11_RS13195 PF04397 LytTr DNA-binding domain AMBLS11_RS13195 PF00072 Response regulator receiver domain AMBLS11_RS13200 PF07549 SecD/SecF GG Motif AMBLS11_RS13200 PF02355 Protein export membrane protein AMBLS11_RS13205 PF02355 Protein export membrane protein AMBLS11_RS13205 PF07549 SecD/SecF GG Motif AMBLS11_RS13205 PF13721 SecD export protein N-terminal TM region AMBLS11_RS13210 PF02699 Preprotein translocase subunit AMBLS11_RS13215 PF01702 Queuine tRNA-ribosyltransferase AMBLS11_RS13220 PF02547 Queuosine biosynthesis protein AMBLS11_RS13235 PF04012 PspA/IM30 family AMBLS11_RS13255 PF06693 Protein of unknown function (DUF1190) AMBLS11_RS13260 PF03738 Glutathionylspermidine synthase preATP-grasp AMBLS11_RS13275 PF04960 Glutaminase AMBLS11_RS13280 PF00245 Alkaline phosphatase AMBLS11_RS13285 PF00072 Response regulator receiver domain AMBLS11_RS13290 PF00463 Isocitrate lyase family AMBLS11_RS13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS13295 PF03466 LysR substrate binding domain AMBLS11_RS13300 PF01274 Malate synthase AMBLS11_RS13310 PF01370 NAD dependent epimerase/dehydratase family AMBLS11_RS13315 PF13180 PDZ domain AMBLS11_RS13335 PF00899 ThiF family AMBLS11_RS13340 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS13360 PF00534 Glycosyl transferases group 1 AMBLS11_RS13360 PF17102 Stealth protein CR3, conserved region 3 AMBLS11_RS13360 PF17103 Stealth protein CR4, conserved region 4 AMBLS11_RS13360 PF11380 Stealth protein CR2, conserved region 2 AMBLS11_RS13360 PF17101 Stealth protein CR1, conserved region 1 AMBLS11_RS13365 PF13439 Glycosyltransferase Family 4 AMBLS11_RS13365 PF00534 Glycosyl transferases group 1 AMBLS11_RS13420 PF02397 Bacterial sugar transferase AMBLS11_RS13435 PF13614 AAA domain AMBLS11_RS13445 PF01471 Putative peptidoglycan binding domain AMBLS11_RS13445 PF13401 AAA domain AMBLS11_RS13450 PF01541 GIY-YIG catalytic domain AMBLS11_RS13460 PF08335 GlnD PII-uridylyltransferase AMBLS11_RS13460 PF03710 Glutamate-ammonia ligase adenylyltransferase AMBLS11_RS13470 PF03279 Bacterial lipid A biosynthesis acyltransferase AMBLS11_RS13500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS13500 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS13500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMBLS11_RS13500 PF09317 Domain of unknown function (DUF1974) AMBLS11_RS13515 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS13515 PF00563 EAL domain AMBLS11_RS13515 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS13520 PF00265 Thymidine kinase AMBLS11_RS13530 PF04820 Tryptophan halogenase AMBLS11_RS13535 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS13555 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AMBLS11_RS13555 PF14508 Glycosyl-hydrolase 97 N-terminal AMBLS11_RS13555 PF10566 Glycoside hydrolase 97 AMBLS11_RS13560 PF01926 50S ribosome-binding GTPase AMBLS11_RS13565 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMBLS11_RS13565 PF00588 SpoU rRNA Methylase family AMBLS11_RS13580 PF01276 Orn/Lys/Arg decarboxylase, major domain AMBLS11_RS13580 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AMBLS11_RS13580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AMBLS11_RS13605 PF00171 Aldehyde dehydrogenase family AMBLS11_RS13610 PF05199 GMC oxidoreductase AMBLS11_RS13610 PF00732 GMC oxidoreductase AMBLS11_RS13625 PF05971 RNA methyltransferase AMBLS11_RS13630 PF09278 MerR, DNA binding AMBLS11_RS13630 PF00376 MerR family regulatory protein AMBLS11_RS13660 PF02770 Acyl-CoA dehydrogenase, middle domain AMBLS11_RS13660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMBLS11_RS13660 PF18158 Adaptive response protein AidB N-terminal domain AMBLS11_RS13685 PF03965 Penicillinase repressor AMBLS11_RS13705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBLS11_RS13715 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS13715 PF01799 [2Fe-2S] binding domain AMBLS11_RS13720 PF00941 FAD binding domain in molybdopterin dehydrogenase AMBLS11_RS13720 PF03450 CO dehydrogenase flavoprotein C-terminal domain AMBLS11_RS13725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMBLS11_RS13725 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMBLS11_RS13750 PF00106 short chain dehydrogenase AMBLS11_RS13755 PF01965 DJ-1/PfpI family AMBLS11_RS13760 PF03631 Virulence factor BrkB AMBLS11_RS13765 PF07690 Major Facilitator Superfamily AMBLS11_RS13770 PF00144 Beta-lactamase AMBLS11_RS13780 PF00072 Response regulator receiver domain AMBLS11_RS13780 PF04397 LytTr DNA-binding domain AMBLS11_RS13795 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS13855 PF07690 Major Facilitator Superfamily AMBLS11_RS13865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMBLS11_RS13865 PF06827 Zinc finger found in FPG and IleRS AMBLS11_RS13865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMBLS11_RS13885 PF09382 RQC domain AMBLS11_RS13885 PF00270 DEAD/DEAH box helicase AMBLS11_RS13885 PF00271 Helicase conserved C-terminal domain AMBLS11_RS13885 PF00570 HRDC domain AMBLS11_RS13885 PF16124 RecQ zinc-binding AMBLS11_RS13900 PF00672 HAMP domain AMBLS11_RS13900 PF01627 Hpt domain AMBLS11_RS13900 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS13900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS13900 PF00072 Response regulator receiver domain AMBLS11_RS13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS13910 PF01590 GAF domain AMBLS11_RS13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS13910 PF00360 Phytochrome region AMBLS11_RS13910 PF08446 PAS fold AMBLS11_RS13910 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS13915 PF07995 Glucose / Sorbosone dehydrogenase AMBLS11_RS13925 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS13925 PF00072 Response regulator receiver domain AMBLS11_RS13930 PF00989 PAS fold AMBLS11_RS13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS13930 PF11808 Phosphate regulon sensor protein PhoR AMBLS11_RS13930 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS13965 PF02347 Glycine cleavage system P-protein AMBLS11_RS13970 PF01597 Glycine cleavage H-protein AMBLS11_RS13975 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMBLS11_RS13975 PF01571 Aminomethyltransferase folate-binding domain AMBLS11_RS13980 PF07690 Major Facilitator Superfamily AMBLS11_RS13985 PF01979 Amidohydrolase family AMBLS11_RS13990 PF01380 SIS domain AMBLS11_RS13995 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMBLS11_RS14000 PF03173 Putative carbohydrate binding domain AMBLS11_RS14000 PF02838 Glycosyl hydrolase family 20, domain 2 AMBLS11_RS14000 PF00728 Glycosyl hydrolase family 20, catalytic domain AMBLS11_RS14010 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS14015 PF04820 Tryptophan halogenase AMBLS11_RS14020 PF03466 LysR substrate binding domain AMBLS11_RS14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS14025 PF00582 Universal stress protein family AMBLS11_RS14030 PF02652 L-lactate permease AMBLS11_RS14040 PF01321 Creatinase/Prolidase N-terminal domain AMBLS11_RS14040 PF00557 Metallopeptidase family M24 AMBLS11_RS14055 PF01494 FAD binding domain AMBLS11_RS14060 PF01494 FAD binding domain AMBLS11_RS14065 PF00557 Metallopeptidase family M24 AMBLS11_RS14065 PF05195 Aminopeptidase P, N-terminal domain AMBLS11_RS14070 PF03695 Uncharacterised protein family (UPF0149) AMBLS11_RS14080 PF00294 pfkB family carbohydrate kinase AMBLS11_RS14085 PF01156 Inosine-uridine preferring nucleoside hydrolase AMBLS11_RS14090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS14090 PF00072 Response regulator receiver domain AMBLS11_RS14090 PF00672 HAMP domain AMBLS11_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS14090 PF01627 Hpt domain AMBLS11_RS14090 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS14095 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMBLS11_RS14100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMBLS11_RS14105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBLS11_RS14105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBLS11_RS14105 PF01842 ACT domain AMBLS11_RS14125 PF06945 Protein of unknown function (DUF1289) AMBLS11_RS14135 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS14140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS14145 PF03466 LysR substrate binding domain AMBLS11_RS14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS14150 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS14150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBLS11_RS14155 PF02817 e3 binding domain AMBLS11_RS14155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMBLS11_RS14155 PF00364 Biotin-requiring enzyme AMBLS11_RS14160 PF17831 Pyruvate dehydrogenase E1 component middle domain AMBLS11_RS14160 PF00456 Transketolase, thiamine diphosphate binding domain AMBLS11_RS14165 PF00392 Bacterial regulatory proteins, gntR family AMBLS11_RS14165 PF07729 FCD domain AMBLS11_RS14175 PF01510 N-acetylmuramoyl-L-alanine amidase AMBLS11_RS14185 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMBLS11_RS14185 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMBLS11_RS14190 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS14195 PF00482 Type II secretion system (T2SS), protein F AMBLS11_RS14200 PF01478 Type IV leader peptidase family AMBLS11_RS14200 PF06750 Bacterial Peptidase A24 N-terminal domain AMBLS11_RS14205 PF01121 Dephospho-CoA kinase AMBLS11_RS14210 PF07072 Cell division protein AMBLS11_RS14215 PF03884 DNA gyrase inhibitor YacG AMBLS11_RS14220 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AMBLS11_RS14225 PF00293 NUDIX domain AMBLS11_RS14230 PF02810 SEC-C motif AMBLS11_RS14230 PF07517 SecA DEAD-like domain AMBLS11_RS14230 PF07516 SecA Wing and Scaffold domain AMBLS11_RS14230 PF01043 SecA preprotein cross-linking domain AMBLS11_RS14235 PF08525 Opacity-associated protein A N-terminal motif AMBLS11_RS14235 PF01476 LysM domain AMBLS11_RS14235 PF01551 Peptidase family M23 AMBLS11_RS14240 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMBLS11_RS14245 PF00091 Tubulin/FtsZ family, GTPase domain AMBLS11_RS14245 PF12327 FtsZ family, C-terminal domain AMBLS11_RS14250 PF02491 SHS2 domain inserted in FTSA AMBLS11_RS14255 PF03799 Cell division protein FtsQ AMBLS11_RS14255 PF08478 POTRA domain, FtsQ-type AMBLS11_RS14260 PF07478 D-ala D-ala ligase C-terminus AMBLS11_RS14260 PF01820 D-ala D-ala ligase N-terminus AMBLS11_RS14265 PF02875 Mur ligase family, glutamate ligase domain AMBLS11_RS14265 PF08245 Mur ligase middle domain AMBLS11_RS14265 PF01225 Mur ligase family, catalytic domain AMBLS11_RS14270 PF03033 Glycosyltransferase family 28 N-terminal domain AMBLS11_RS14270 PF04101 Glycosyltransferase family 28 C-terminal domain AMBLS11_RS14275 PF01098 Cell cycle protein AMBLS11_RS14280 PF02875 Mur ligase family, glutamate ligase domain AMBLS11_RS14280 PF08245 Mur ligase middle domain AMBLS11_RS14285 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMBLS11_RS14285 PF00953 Glycosyl transferase family 4 AMBLS11_RS14290 PF01225 Mur ligase family, catalytic domain AMBLS11_RS14290 PF08245 Mur ligase middle domain AMBLS11_RS14290 PF02875 Mur ligase family, glutamate ligase domain AMBLS11_RS14295 PF01225 Mur ligase family, catalytic domain AMBLS11_RS14295 PF02875 Mur ligase family, glutamate ligase domain AMBLS11_RS14295 PF08245 Mur ligase middle domain AMBLS11_RS14300 PF03717 Penicillin-binding Protein dimerisation domain AMBLS11_RS14300 PF00905 Penicillin binding protein transpeptidase domain AMBLS11_RS14305 PF04999 Cell division protein FtsL AMBLS11_RS14310 PF01795 MraW methylase family AMBLS11_RS14315 PF02381 MraZ protein, putative antitoxin-like AMBLS11_RS14335 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS14340 PF00529 HlyD membrane-fusion protein of T1SS AMBLS11_RS14340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMBLS11_RS14360 PF08534 Redoxin AMBLS11_RS14360 PF00462 Glutaredoxin AMBLS11_RS14365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMBLS11_RS14375 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS14385 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS14385 PF00158 Sigma-54 interaction domain AMBLS11_RS14385 PF00072 Response regulator receiver domain AMBLS11_RS14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS14390 PF00672 HAMP domain AMBLS11_RS14390 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS14390 PF13426 PAS domain AMBLS11_RS14395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMBLS11_RS14395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMBLS11_RS14410 PF00924 Mechanosensitive ion channel AMBLS11_RS14410 PF05552 Conserved TM helix AMBLS11_RS14415 PF04452 RNA methyltransferase AMBLS11_RS14420 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMBLS11_RS14420 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMBLS11_RS14425 PF02622 Uncharacterized ACR, COG1678 AMBLS11_RS14430 PF03652 Holliday junction resolvase AMBLS11_RS14440 PF00437 Type II/IV secretion system protein AMBLS11_RS14445 PF00437 Type II/IV secretion system protein AMBLS11_RS14450 PF01168 Alanine racemase, N-terminal domain AMBLS11_RS14455 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMBLS11_RS14455 PF03807 NADP oxidoreductase coenzyme F420-dependent AMBLS11_RS14460 PF02325 YGGT family AMBLS11_RS14470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS14470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBLS11_RS14495 PF00080 Copper/zinc superoxide dismutase (SODC) AMBLS11_RS14500 PF02566 OsmC-like protein AMBLS11_RS14510 PF03591 AzlC protein AMBLS11_RS14520 PF07690 Major Facilitator Superfamily AMBLS11_RS14525 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AMBLS11_RS14530 PF03883 Peroxide stress protein YaaA AMBLS11_RS14535 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMBLS11_RS14540 PF00342 Phosphoglucose isomerase AMBLS11_RS14545 PF03167 Uracil DNA glycosylase superfamily AMBLS11_RS14550 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS14550 PF14821 Threonine synthase N terminus AMBLS11_RS14555 PF00288 GHMP kinases N terminal domain AMBLS11_RS14555 PF08544 GHMP kinases C terminal AMBLS11_RS14560 PF03447 Homoserine dehydrogenase, NAD binding domain AMBLS11_RS14560 PF00742 Homoserine dehydrogenase AMBLS11_RS14560 PF13840 ACT domain AMBLS11_RS14560 PF01842 ACT domain AMBLS11_RS14560 PF00696 Amino acid kinase family AMBLS11_RS14565 PF17755 UvrA DNA-binding domain AMBLS11_RS14570 PF03466 LysR substrate binding domain AMBLS11_RS14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS14575 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS14575 PF00107 Zinc-binding dehydrogenase AMBLS11_RS14580 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS14580 PF00072 Response regulator receiver domain AMBLS11_RS14585 PF07730 Histidine kinase AMBLS11_RS14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS14600 PF01022 Bacterial regulatory protein, arsR family AMBLS11_RS14610 PF03358 NADPH-dependent FMN reductase AMBLS11_RS14615 PF01758 Sodium Bile acid symporter family AMBLS11_RS14620 PF13276 HTH-like domain AMBLS11_RS14620 PF13333 Integrase core domain AMBLS11_RS14620 PF00665 Integrase core domain AMBLS11_RS14630 PF00072 Response regulator receiver domain AMBLS11_RS14635 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AMBLS11_RS14640 PF00072 Response regulator receiver domain AMBLS11_RS14640 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS14645 PF00672 HAMP domain AMBLS11_RS14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS14645 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS14665 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS14670 PF04116 Fatty acid hydroxylase superfamily AMBLS11_RS14690 PF16653 Saccharopine dehydrogenase C-terminal domain AMBLS11_RS14690 PF03435 Saccharopine dehydrogenase NADP binding domain AMBLS11_RS14695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMBLS11_RS14710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMBLS11_RS14715 PF04348 LppC putative lipoprotein AMBLS11_RS14720 PF02021 Uncharacterised protein family UPF0102 AMBLS11_RS14725 PF00534 Glycosyl transferases group 1 AMBLS11_RS14730 PF13580 SIS domain AMBLS11_RS14735 PF04972 BON domain AMBLS11_RS14740 PF07690 Major Facilitator Superfamily AMBLS11_RS14750 PF00893 Small Multidrug Resistance protein AMBLS11_RS14755 PF07730 Histidine kinase AMBLS11_RS14760 PF00072 Response regulator receiver domain AMBLS11_RS14760 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS14775 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS14775 PF00593 TonB dependent receptor AMBLS11_RS14790 PF00285 Citrate synthase, C-terminal domain AMBLS11_RS14795 PF00330 Aconitase family (aconitate hydratase) AMBLS11_RS14795 PF00694 Aconitase C-terminal domain AMBLS11_RS14800 PF04303 PrpF protein AMBLS11_RS14805 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS14810 PF00474 Sodium:solute symporter family AMBLS11_RS14825 PF00072 Response regulator receiver domain AMBLS11_RS14825 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMBLS11_RS14825 PF01627 Hpt domain AMBLS11_RS14825 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS14825 PF00989 PAS fold AMBLS11_RS14830 PF01510 N-acetylmuramoyl-L-alanine amidase AMBLS11_RS14840 PF01493 GXGXG motif AMBLS11_RS14840 PF01645 Conserved region in glutamate synthase AMBLS11_RS14840 PF00310 Glutamine amidotransferases class-II AMBLS11_RS14840 PF04898 Glutamate synthase central domain AMBLS11_RS14845 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS14845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMBLS11_RS14860 PF01048 Phosphorylase superfamily AMBLS11_RS14865 PF03186 CobD/Cbib protein AMBLS11_RS14870 PF01497 Periplasmic binding protein AMBLS11_RS14875 PF00581 Rhodanese-like domain AMBLS11_RS14890 PF01266 FAD dependent oxidoreductase AMBLS11_RS14895 PF07237 Protein of unknown function (DUF1428) AMBLS11_RS14915 PF00579 tRNA synthetases class I (W and Y) AMBLS11_RS14915 PF01479 S4 domain AMBLS11_RS14920 PF01464 Transglycosylase SLT domain AMBLS11_RS14920 PF10145 Phage-related minor tail protein AMBLS11_RS14920 PF01551 Peptidase family M23 AMBLS11_RS14925 PF03702 Anhydro-N-acetylmuramic acid kinase AMBLS11_RS14930 PF03600 Citrate transporter AMBLS11_RS14935 PF07690 Major Facilitator Superfamily AMBLS11_RS14945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMBLS11_RS14955 PF01053 Cys/Met metabolism PLP-dependent enzyme AMBLS11_RS14960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBLS11_RS14965 PF00043 Glutathione S-transferase, C-terminal domain AMBLS11_RS14965 PF13417 Glutathione S-transferase, N-terminal domain AMBLS11_RS14970 PF01521 Iron-sulphur cluster biosynthesis AMBLS11_RS14975 PF03976 Polyphosphate kinase 2 (PPK2) AMBLS11_RS14980 PF03776 Septum formation topological specificity factor MinE AMBLS11_RS14985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMBLS11_RS14990 PF05209 Septum formation inhibitor MinC, N-terminal domain AMBLS11_RS14990 PF03775 Septum formation inhibitor MinC, C-terminal domain AMBLS11_RS14995 PF00206 Lyase AMBLS11_RS14995 PF10415 Fumarase C C-terminus AMBLS11_RS15005 PF00127 Copper binding proteins, plastocyanin/azurin family AMBLS11_RS15025 PF03653 Uncharacterised protein family (UPF0093) AMBLS11_RS15040 PF01566 Natural resistance-associated macrophage protein AMBLS11_RS15045 PF00155 Aminotransferase class I and II AMBLS11_RS15055 PF00679 Elongation factor G C-terminus AMBLS11_RS15055 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS15055 PF03144 Elongation factor Tu domain 2 AMBLS11_RS15060 PF00120 Glutamine synthetase, catalytic domain AMBLS11_RS15060 PF03951 Glutamine synthetase, beta-Grasp domain AMBLS11_RS15070 PF00989 PAS fold AMBLS11_RS15070 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15075 PF00158 Sigma-54 interaction domain AMBLS11_RS15075 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS15075 PF00072 Response regulator receiver domain AMBLS11_RS15080 PF00072 Response regulator receiver domain AMBLS11_RS15085 PF01553 Acyltransferase AMBLS11_RS15090 PF06877 Regulator of ribonuclease activity B AMBLS11_RS15100 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS15120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMBLS11_RS15120 PF01627 Hpt domain AMBLS11_RS15120 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS15120 PF00072 Response regulator receiver domain AMBLS11_RS15120 PF00672 HAMP domain AMBLS11_RS15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15125 PF10458 Valyl tRNA synthetase tRNA binding arm AMBLS11_RS15125 PF00133 tRNA synthetases class I (I, L, M and V) AMBLS11_RS15125 PF08264 Anticodon-binding domain of tRNA AMBLS11_RS15130 PF04364 DNA polymerase III chi subunit, HolC AMBLS11_RS15135 PF02789 Cytosol aminopeptidase family, N-terminal domain AMBLS11_RS15135 PF00883 Cytosol aminopeptidase family, catalytic domain AMBLS11_RS15140 PF03739 Lipopolysaccharide export system permease LptF/LptG AMBLS11_RS15145 PF03739 Lipopolysaccharide export system permease LptF/LptG AMBLS11_RS15160 PF04542 Sigma-70 region 2 AMBLS11_RS15160 PF04545 Sigma-70, region 4 AMBLS11_RS15195 PF01638 HxlR-like helix-turn-helix AMBLS11_RS15210 PF00043 Glutathione S-transferase, C-terminal domain AMBLS11_RS15210 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS15220 PF00689 Cation transporting ATPase, C-terminus AMBLS11_RS15220 PF00690 Cation transporter/ATPase, N-terminus AMBLS11_RS15230 PF06165 Glycosyltransferase family 36 AMBLS11_RS15230 PF10091 Putative glucoamylase AMBLS11_RS15230 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMBLS11_RS15245 PF01145 SPFH domain / Band 7 family AMBLS11_RS15250 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS15250 PF17158 Membrane-associated sensor, integral membrane domain AMBLS11_RS15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS15270 PF03466 LysR substrate binding domain AMBLS11_RS15275 PF00580 UvrD/REP helicase N-terminal domain AMBLS11_RS15275 PF13361 UvrD-like helicase C-terminal domain AMBLS11_RS15280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBLS11_RS15280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBLS11_RS15285 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15285 PF01627 Hpt domain AMBLS11_RS15285 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMBLS11_RS15285 PF00072 Response regulator receiver domain AMBLS11_RS15295 PF01594 AI-2E family transporter AMBLS11_RS15310 PF08240 Alcohol dehydrogenase GroES-like domain AMBLS11_RS15310 PF00107 Zinc-binding dehydrogenase AMBLS11_RS15315 PF13098 Thioredoxin-like domain AMBLS11_RS15320 PF00578 AhpC/TSA family AMBLS11_RS15325 PF00072 Response regulator receiver domain AMBLS11_RS15325 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS15330 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15330 PF08521 Two-component sensor kinase N-terminal AMBLS11_RS15355 PF00892 EamA-like transporter family AMBLS11_RS15370 PF00593 TonB dependent receptor AMBLS11_RS15370 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS15380 PF02659 Putative manganese efflux pump AMBLS11_RS15390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMBLS11_RS15390 PF00753 Metallo-beta-lactamase superfamily AMBLS11_RS15390 PF10996 Beta-Casp domain AMBLS11_RS15400 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMBLS11_RS15405 PF01321 Creatinase/Prolidase N-terminal domain AMBLS11_RS15405 PF00557 Metallopeptidase family M24 AMBLS11_RS15410 PF05221 S-adenosyl-L-homocysteine hydrolase AMBLS11_RS15410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMBLS11_RS15415 PF08448 PAS fold AMBLS11_RS15415 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS15420 PF03547 Membrane transport protein AMBLS11_RS15425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMBLS11_RS15425 PF13360 PQQ-like domain AMBLS11_RS15430 PF01011 PQQ enzyme repeat AMBLS11_RS15430 PF13360 PQQ-like domain AMBLS11_RS15450 PF00005 ABC transporter AMBLS11_RS15465 PF12706 Beta-lactamase superfamily domain AMBLS11_RS15470 PF03070 TENA/THI-4/PQQC family AMBLS11_RS15475 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMBLS11_RS15480 PF13186 Iron-sulfur cluster-binding domain AMBLS11_RS15480 PF04055 Radical SAM superfamily AMBLS11_RS15505 PF00072 Response regulator receiver domain AMBLS11_RS15505 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS15510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15510 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS15520 PF04205 FMN-binding domain AMBLS11_RS15520 PF12801 4Fe-4S binding domain AMBLS11_RS15525 PF00171 Aldehyde dehydrogenase family AMBLS11_RS15530 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS15530 PF00072 Response regulator receiver domain AMBLS11_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15535 PF05231 MASE1 AMBLS11_RS15535 PF07730 Histidine kinase AMBLS11_RS15540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS15540 PF13426 PAS domain AMBLS11_RS15540 PF08447 PAS fold AMBLS11_RS15550 PF00171 Aldehyde dehydrogenase family AMBLS11_RS15555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMBLS11_RS15555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMBLS11_RS15575 PF02028 BCCT, betaine/carnitine/choline family transporter AMBLS11_RS15580 PF01070 FMN-dependent dehydrogenase AMBLS11_RS15585 PF01565 FAD binding domain AMBLS11_RS15585 PF09330 D-lactate dehydrogenase, membrane binding AMBLS11_RS15590 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS15595 PF03783 Curli production assembly/transport component CsgG AMBLS11_RS15620 PF00082 Subtilase family AMBLS11_RS15625 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS15625 PF00072 Response regulator receiver domain AMBLS11_RS15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15630 PF07730 Histidine kinase AMBLS11_RS15640 PF00270 DEAD/DEAH box helicase AMBLS11_RS15640 PF00271 Helicase conserved C-terminal domain AMBLS11_RS15645 PF00924 Mechanosensitive ion channel AMBLS11_RS15645 PF12795 Mechanosensitive ion channel porin domain AMBLS11_RS15645 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMBLS11_RS15655 PF00141 Peroxidase AMBLS11_RS15665 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS15665 PF13426 PAS domain AMBLS11_RS15665 PF00563 EAL domain AMBLS11_RS15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS15680 PF03466 LysR substrate binding domain AMBLS11_RS15690 PF01925 Sulfite exporter TauE/SafE AMBLS11_RS15695 PF00155 Aminotransferase class I and II AMBLS11_RS15700 PF08769 Sporulation initiation factor Spo0A C terminal AMBLS11_RS15700 PF00072 Response regulator receiver domain AMBLS11_RS15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS15710 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS15720 PF03104 DNA polymerase family B, exonuclease domain AMBLS11_RS15720 PF00136 DNA polymerase family B AMBLS11_RS15730 PF00501 AMP-binding enzyme AMBLS11_RS15730 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS15760 PF05958 tRNA (Uracil-5-)-methyltransferase AMBLS11_RS15765 PF00440 Bacterial regulatory proteins, tetR family AMBLS11_RS15775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBLS11_RS15775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS15785 PF03167 Uracil DNA glycosylase superfamily AMBLS11_RS15790 PF00563 EAL domain AMBLS11_RS15790 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS15790 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS15800 PF01507 Phosphoadenosine phosphosulfate reductase family AMBLS11_RS15805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMBLS11_RS15805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMBLS11_RS15810 PF00667 FAD binding domain AMBLS11_RS15810 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS15810 PF00258 Flavodoxin AMBLS11_RS15830 PF04024 PspC domain AMBLS11_RS15835 PF04012 PspA/IM30 family AMBLS11_RS15845 PF01207 Dihydrouridine synthase (Dus) AMBLS11_RS15865 PF00691 OmpA family AMBLS11_RS15865 PF01389 OmpA-like transmembrane domain AMBLS11_RS15870 PF05362 Lon protease (S16) C-terminal proteolytic domain AMBLS11_RS15870 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS15870 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMBLS11_RS15875 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS15875 PF00563 EAL domain AMBLS11_RS15875 PF03707 Bacterial signalling protein N terminal repeat AMBLS11_RS15880 PF00756 Putative esterase AMBLS11_RS15885 PF01553 Acyltransferase AMBLS11_RS15890 PF01553 Acyltransferase AMBLS11_RS15895 PF00924 Mechanosensitive ion channel AMBLS11_RS15910 PF01370 NAD dependent epimerase/dehydratase family AMBLS11_RS15915 PF00209 Sodium:neurotransmitter symporter family AMBLS11_RS15930 PF01625 Peptide methionine sulfoxide reductase AMBLS11_RS15945 PF00258 Flavodoxin AMBLS11_RS15955 PF02472 Biopolymer transport protein ExbD/TolR AMBLS11_RS15970 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AMBLS11_RS15975 PF01270 Glycosyl hydrolases family 8 AMBLS11_RS15985 PF03552 Cellulose synthase AMBLS11_RS15985 PF00535 Glycosyl transferase family 2 AMBLS11_RS15985 PF07238 PilZ domain AMBLS11_RS15985 PF03170 Bacterial cellulose synthase subunit AMBLS11_RS16000 PF05175 Methyltransferase small domain AMBLS11_RS16005 PF13460 NAD(P)H-binding AMBLS11_RS16010 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AMBLS11_RS16010 PF00326 Prolyl oligopeptidase family AMBLS11_RS16015 PF00082 Subtilase family AMBLS11_RS16020 PF08000 Bacterial PH domain AMBLS11_RS16025 PF08448 PAS fold AMBLS11_RS16025 PF00563 EAL domain AMBLS11_RS16025 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS16030 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS16035 PF07969 Amidohydrolase family AMBLS11_RS16045 PF00753 Metallo-beta-lactamase superfamily AMBLS11_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS16055 PF03466 LysR substrate binding domain AMBLS11_RS16060 PF13230 Glutamine amidotransferases class-II AMBLS11_RS16075 PF05360 yiaA/B two helix domain AMBLS11_RS16105 PF09905 DNA-binding protein VF530 AMBLS11_RS16110 PF02447 GntP family permease AMBLS11_RS16120 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS16125 PF00753 Metallo-beta-lactamase superfamily AMBLS11_RS16135 PF11799 impB/mucB/samB family C-terminal domain AMBLS11_RS16135 PF00817 impB/mucB/samB family AMBLS11_RS16135 PF11798 IMS family HHH motif AMBLS11_RS16150 PF02424 ApbE family AMBLS11_RS16155 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS16155 PF00111 2Fe-2S iron-sulfur cluster binding domain AMBLS11_RS16155 PF00970 Oxidoreductase FAD-binding domain AMBLS11_RS16160 PF02508 Rnf-Nqr subunit, membrane protein AMBLS11_RS16165 PF02508 Rnf-Nqr subunit, membrane protein AMBLS11_RS16170 PF04205 FMN-binding domain AMBLS11_RS16175 PF03116 NQR2, RnfD, RnfE family AMBLS11_RS16180 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AMBLS11_RS16180 PF11973 NQRA C-terminal domain AMBLS11_RS16185 PF07055 Enoyl reductase FAD binding domain AMBLS11_RS16185 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMBLS11_RS16185 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMBLS11_RS16190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMBLS11_RS16190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBLS11_RS16195 PF00311 Phosphoenolpyruvate carboxylase AMBLS11_RS16205 PF00056 lactate/malate dehydrogenase, NAD binding domain AMBLS11_RS16205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMBLS11_RS16210 PF01316 Arginine repressor, DNA binding domain AMBLS11_RS16210 PF02863 Arginine repressor, C-terminal domain AMBLS11_RS16220 PF00593 TonB dependent receptor AMBLS11_RS16235 PF00485 Phosphoribulokinase / Uridine kinase family AMBLS11_RS16240 PF01773 Na+ dependent nucleoside transporter N-terminus AMBLS11_RS16240 PF07662 Na+ dependent nucleoside transporter C-terminus AMBLS11_RS16240 PF07670 Nucleoside recognition AMBLS11_RS16255 PF02469 Fasciclin domain AMBLS11_RS16265 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS16265 PF00072 Response regulator receiver domain AMBLS11_RS16275 PF00478 IMP dehydrogenase / GMP reductase domain AMBLS11_RS16275 PF00571 CBS domain AMBLS11_RS16280 PF00474 Sodium:solute symporter family AMBLS11_RS16290 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS16290 PF18415 Histidine kinase receptor ArcB trans-membrane domain AMBLS11_RS16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS16300 PF08443 RimK-like ATP-grasp domain AMBLS11_RS16300 PF18030 RimK PreATP-grasp domain AMBLS11_RS16310 PF08443 RimK-like ATP-grasp domain AMBLS11_RS16310 PF18030 RimK PreATP-grasp domain AMBLS11_RS16320 PF00072 Response regulator receiver domain AMBLS11_RS16320 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS16325 PF00501 AMP-binding enzyme AMBLS11_RS16325 PF13193 AMP-binding enzyme C-terminal domain AMBLS11_RS16325 PF16177 Acetyl-coenzyme A synthetase N-terminus AMBLS11_RS16335 PF00248 Aldo/keto reductase family AMBLS11_RS16345 PF00082 Subtilase family AMBLS11_RS16360 PF00069 Protein kinase domain AMBLS11_RS16365 PF17200 Single Cache domain 2 AMBLS11_RS16365 PF07730 Histidine kinase AMBLS11_RS16370 PF00072 Response regulator receiver domain AMBLS11_RS16370 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS16375 PF00082 Subtilase family AMBLS11_RS16390 PF06628 Catalase-related immune-responsive AMBLS11_RS16390 PF00199 Catalase AMBLS11_RS16400 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS16400 PF03144 Elongation factor Tu domain 2 AMBLS11_RS16400 PF03143 Elongation factor Tu C-terminal domain AMBLS11_RS16425 PF03309 Type III pantothenate kinase AMBLS11_RS16430 PF08279 HTH domain AMBLS11_RS16430 PF03099 Biotin/lipoate A/B protein ligase family AMBLS11_RS16430 PF02237 Biotin protein ligase C terminal domain AMBLS11_RS16435 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMBLS11_RS16435 PF01565 FAD binding domain AMBLS11_RS16440 PF00672 HAMP domain AMBLS11_RS16440 PF12729 Four helix bundle sensory module for signal transduction AMBLS11_RS16440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS16480 PF00005 ABC transporter AMBLS11_RS16480 PF03412 Peptidase C39 family AMBLS11_RS16480 PF00664 ABC transporter transmembrane region AMBLS11_RS16485 PF03466 LysR substrate binding domain AMBLS11_RS16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS16495 PF00483 Nucleotidyl transferase AMBLS11_RS16495 PF01050 Mannose-6-phosphate isomerase AMBLS11_RS16500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMBLS11_RS16500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMBLS11_RS16500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMBLS11_RS16505 PF00535 Glycosyl transferase family 2 AMBLS11_RS16510 PF16363 GDP-mannose 4,6 dehydratase AMBLS11_RS16515 PF04321 RmlD substrate binding domain AMBLS11_RS16520 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMBLS11_RS16525 PF00483 Nucleotidyl transferase AMBLS11_RS16530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMBLS11_RS16530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMBLS11_RS16530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMBLS11_RS16530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMBLS11_RS16545 PF00535 Glycosyl transferase family 2 AMBLS11_RS16550 PF00535 Glycosyl transferase family 2 AMBLS11_RS16560 PF00535 Glycosyl transferase family 2 AMBLS11_RS16570 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS16580 PF00535 Glycosyl transferase family 2 AMBLS11_RS16595 PF07196 Flagellin hook IN motif AMBLS11_RS16595 PF00669 Bacterial flagellin N-terminal helical region AMBLS11_RS16595 PF00700 Bacterial flagellin C-terminal helical region AMBLS11_RS16605 PF01196 Ribosomal protein L17 AMBLS11_RS16610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMBLS11_RS16610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMBLS11_RS16610 PF01000 RNA polymerase Rpb3/RpoA insert domain AMBLS11_RS16615 PF00163 Ribosomal protein S4/S9 N-terminal domain AMBLS11_RS16615 PF01479 S4 domain AMBLS11_RS16620 PF00411 Ribosomal protein S11 AMBLS11_RS16625 PF00416 Ribosomal protein S13/S18 AMBLS11_RS16630 PF00444 Ribosomal protein L36 AMBLS11_RS16635 PF00344 SecY translocase AMBLS11_RS16640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMBLS11_RS16645 PF00327 Ribosomal protein L30p/L7e AMBLS11_RS16650 PF00333 Ribosomal protein S5, N-terminal domain AMBLS11_RS16650 PF03719 Ribosomal protein S5, C-terminal domain AMBLS11_RS16655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMBLS11_RS16660 PF00347 Ribosomal protein L6 AMBLS11_RS16665 PF00410 Ribosomal protein S8 AMBLS11_RS16670 PF00253 Ribosomal protein S14p/S29e AMBLS11_RS16675 PF00281 Ribosomal protein L5 AMBLS11_RS16675 PF00673 ribosomal L5P family C-terminus AMBLS11_RS16680 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMBLS11_RS16680 PF00467 KOW motif AMBLS11_RS16685 PF00238 Ribosomal protein L14p/L23e AMBLS11_RS16690 PF09308 LuxQ, periplasmic AMBLS11_RS16690 PF00072 Response regulator receiver domain AMBLS11_RS16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS16690 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS16700 PF00082 Subtilase family AMBLS11_RS16700 PF05922 Peptidase inhibitor I9 AMBLS11_RS16705 PF13276 HTH-like domain AMBLS11_RS16705 PF00665 Integrase core domain AMBLS11_RS16705 PF13333 Integrase core domain AMBLS11_RS16715 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMBLS11_RS16715 PF00588 SpoU rRNA Methylase family AMBLS11_RS16720 PF00773 RNB domain AMBLS11_RS16720 PF08461 Ribonuclease R winged-helix domain AMBLS11_RS16720 PF00575 S1 RNA binding domain AMBLS11_RS16720 PF17876 Cold shock domain AMBLS11_RS16720 PF08206 Ribonuclease B OB domain AMBLS11_RS16725 PF16655 PhoD-like phosphatase, N-terminal domain AMBLS11_RS16725 PF09423 PhoD-like phosphatase AMBLS11_RS16740 PF00593 TonB dependent receptor AMBLS11_RS16740 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS16755 PF08238 Sel1 repeat AMBLS11_RS16770 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMBLS11_RS16775 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS16785 PF04389 Peptidase family M28 AMBLS11_RS16795 PF00360 Phytochrome region AMBLS11_RS16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS16795 PF01590 GAF domain AMBLS11_RS16795 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS16795 PF08446 PAS fold AMBLS11_RS16805 PF01654 Cytochrome bd terminal oxidase subunit I AMBLS11_RS16810 PF02322 Cytochrome bd terminal oxidase subunit II AMBLS11_RS16815 PF01037 Lrp/AsnC ligand binding domain AMBLS11_RS16815 PF13404 AsnC-type helix-turn-helix domain AMBLS11_RS16825 PF00313 'Cold-shock' DNA-binding domain AMBLS11_RS16830 PF03109 ABC1 family AMBLS11_RS16840 PF01209 ubiE/COQ5 methyltransferase family AMBLS11_RS16850 PF01432 Peptidase family M3 AMBLS11_RS16855 PF00072 Response regulator receiver domain AMBLS11_RS16865 PF13188 PAS domain AMBLS11_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS16865 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS16865 PF08448 PAS fold AMBLS11_RS16865 PF00072 Response regulator receiver domain AMBLS11_RS16870 PF00158 Sigma-54 interaction domain AMBLS11_RS16870 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS16870 PF00072 Response regulator receiver domain AMBLS11_RS16875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMBLS11_RS16875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS16880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMBLS11_RS16880 PF00384 Molybdopterin oxidoreductase AMBLS11_RS16880 PF01568 Molydopterin dinucleotide binding domain AMBLS11_RS16885 PF00593 TonB dependent receptor AMBLS11_RS16885 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS16895 PF00326 Prolyl oligopeptidase family AMBLS11_RS16895 PF07676 WD40-like Beta Propeller Repeat AMBLS11_RS16910 PF03412 Peptidase C39 family AMBLS11_RS16910 PF00005 ABC transporter AMBLS11_RS16910 PF00664 ABC transporter transmembrane region AMBLS11_RS16915 PF00072 Response regulator receiver domain AMBLS11_RS16915 PF00196 Bacterial regulatory proteins, luxR family AMBLS11_RS16935 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AMBLS11_RS16940 PF00004 ATPase family associated with various cellular activities (AAA) AMBLS11_RS16940 PF07724 AAA domain (Cdc48 subfamily) AMBLS11_RS16945 PF00227 Proteasome subunit AMBLS11_RS16955 PF05036 Sporulation related domain AMBLS11_RS16960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMBLS11_RS16960 PF18074 Primosomal protein N C-terminal domain AMBLS11_RS16960 PF17764 3′ DNA-binding domain (3′BD) AMBLS11_RS16960 PF00271 Helicase conserved C-terminal domain AMBLS11_RS16960 PF00270 DEAD/DEAH box helicase AMBLS11_RS16965 PF01197 Ribosomal protein L31 AMBLS11_RS16975 PF03949 Malic enzyme, NAD binding domain AMBLS11_RS16975 PF00390 Malic enzyme, N-terminal domain AMBLS11_RS16985 PF02219 Methylenetetrahydrofolate reductase AMBLS11_RS16990 PF03631 Virulence factor BrkB AMBLS11_RS17005 PF00561 alpha/beta hydrolase fold AMBLS11_RS17010 PF02580 D-Tyr-tRNA(Tyr) deacylase AMBLS11_RS17015 PF00583 Acetyltransferase (GNAT) family AMBLS11_RS17015 PF09500 Putative thioesterase (yiiD_Cterm) AMBLS11_RS17020 PF04542 Sigma-70 region 2 AMBLS11_RS17020 PF04545 Sigma-70, region 4 AMBLS11_RS17020 PF00140 Sigma-70 factor, region 1.2 AMBLS11_RS17025 PF08668 HDOD domain AMBLS11_RS17025 PF00563 EAL domain AMBLS11_RS17030 PF08668 HDOD domain AMBLS11_RS17030 PF00563 EAL domain AMBLS11_RS17035 PF18075 FtsX extracellular domain AMBLS11_RS17040 PF00005 ABC transporter AMBLS11_RS17045 PF00448 SRP54-type protein, GTPase domain AMBLS11_RS17045 PF02881 SRP54-type protein, helical bundle domain AMBLS11_RS17060 PF01914 MarC family integral membrane protein AMBLS11_RS17070 PF00883 Cytosol aminopeptidase family, catalytic domain AMBLS11_RS17070 PF12404 Peptidase AMBLS11_RS17075 PF03749 Sugar fermentation stimulation protein RE domain AMBLS11_RS17075 PF17746 SfsA N-terminal OB domain AMBLS11_RS17080 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMBLS11_RS17085 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMBLS11_RS17090 PF12626 Polymerase A arginine-rich C-terminus AMBLS11_RS17090 PF01743 Poly A polymerase head domain AMBLS11_RS17090 PF12627 Probable RNA and SrmB- binding site of polymerase A AMBLS11_RS17095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMBLS11_RS17100 PF02548 Ketopantoate hydroxymethyltransferase AMBLS11_RS17105 PF02569 Pantoate-beta-alanine ligase AMBLS11_RS17110 PF00282 Pyridoxal-dependent decarboxylase conserved domain AMBLS11_RS17125 PF01061 ABC-2 type transporter AMBLS11_RS17130 PF00005 ABC transporter AMBLS11_RS17135 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS17135 PF00072 Response regulator receiver domain AMBLS11_RS17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS17140 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS17140 PF00672 HAMP domain AMBLS11_RS17150 PF01595 Cyclin M transmembrane N-terminal domain AMBLS11_RS17150 PF00571 CBS domain AMBLS11_RS17155 PF03773 Predicted permease AMBLS11_RS17160 PF02554 Carbon starvation protein CstA AMBLS11_RS17160 PF13722 5TM C-terminal transporter carbon starvation CstA AMBLS11_RS17165 PF00258 Flavodoxin AMBLS11_RS17165 PF00667 FAD binding domain AMBLS11_RS17165 PF00175 Oxidoreductase NAD-binding domain AMBLS11_RS17210 PF02472 Biopolymer transport protein ExbD/TolR AMBLS11_RS17220 PF01618 MotA/TolQ/ExbB proton channel family AMBLS11_RS17230 PF00593 TonB dependent receptor AMBLS11_RS17230 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS17235 PF01070 FMN-dependent dehydrogenase AMBLS11_RS17240 PF13640 2OG-Fe(II) oxygenase superfamily AMBLS11_RS17240 PF18331 PKHD-type hydroxylase C-terminal domain AMBLS11_RS17245 PF00593 TonB dependent receptor AMBLS11_RS17245 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS17265 PF00679 Elongation factor G C-terminus AMBLS11_RS17265 PF03144 Elongation factor Tu domain 2 AMBLS11_RS17265 PF00009 Elongation factor Tu GTP binding domain AMBLS11_RS17265 PF03764 Elongation factor G, domain IV AMBLS11_RS17265 PF14492 Elongation Factor G, domain II AMBLS11_RS17270 PF00177 Ribosomal protein S7p/S5e AMBLS11_RS17275 PF00164 Ribosomal protein S12/S23 AMBLS11_RS17280 PF04998 RNA polymerase Rpb1, domain 5 AMBLS11_RS17280 PF05000 RNA polymerase Rpb1, domain 4 AMBLS11_RS17280 PF04983 RNA polymerase Rpb1, domain 3 AMBLS11_RS17280 PF00623 RNA polymerase Rpb1, domain 2 AMBLS11_RS17280 PF04997 RNA polymerase Rpb1, domain 1 AMBLS11_RS17285 PF04565 RNA polymerase Rpb2, domain 3 AMBLS11_RS17285 PF10385 RNA polymerase beta subunit external 1 domain AMBLS11_RS17285 PF04560 RNA polymerase Rpb2, domain 7 AMBLS11_RS17285 PF00562 RNA polymerase Rpb2, domain 6 AMBLS11_RS17285 PF04563 RNA polymerase beta subunit AMBLS11_RS17285 PF04561 RNA polymerase Rpb2, domain 2 AMBLS11_RS17290 PF16320 Ribosomal protein L7/L12 dimerisation domain AMBLS11_RS17290 PF00542 Ribosomal protein L7/L12 C-terminal domain AMBLS11_RS17295 PF00466 Ribosomal protein L10 AMBLS11_RS17300 PF00687 Ribosomal protein L1p/L10e family AMBLS11_RS17305 PF00298 Ribosomal protein L11, RNA binding domain AMBLS11_RS17305 PF03946 Ribosomal protein L11, N-terminal domain AMBLS11_RS17310 PF00467 KOW motif AMBLS11_RS17310 PF02357 Transcription termination factor nusG AMBLS11_RS17315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMBLS11_RS17325 PF00005 ABC transporter AMBLS11_RS17325 PF00664 ABC transporter transmembrane region AMBLS11_RS17330 PF03737 Aldolase/RraA AMBLS11_RS17335 PF01431 Peptidase family M13 AMBLS11_RS17335 PF05649 Peptidase family M13 AMBLS11_RS17350 PF00271 Helicase conserved C-terminal domain AMBLS11_RS17350 PF00270 DEAD/DEAH box helicase AMBLS11_RS17350 PF03880 DbpA RNA binding domain AMBLS11_RS17360 PF01979 Amidohydrolase family AMBLS11_RS17365 PF08212 Lipocalin-like domain AMBLS11_RS17370 PF00248 Aldo/keto reductase family AMBLS11_RS17375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMBLS11_RS17380 PF00924 Mechanosensitive ion channel AMBLS11_RS17380 PF05552 Conserved TM helix AMBLS11_RS17385 PF07690 Major Facilitator Superfamily AMBLS11_RS17390 PF00128 Alpha amylase, catalytic domain AMBLS11_RS17400 PF01227 GTP cyclohydrolase I AMBLS11_RS17410 PF04371 Porphyromonas-type peptidyl-arginine deiminase AMBLS11_RS17415 PF00795 Carbon-nitrogen hydrolase AMBLS11_RS17425 PF00271 Helicase conserved C-terminal domain AMBLS11_RS17425 PF08494 DEAD/H associated AMBLS11_RS17425 PF00270 DEAD/DEAH box helicase AMBLS11_RS17450 PF04675 DNA ligase N terminus AMBLS11_RS17450 PF01068 ATP dependent DNA ligase domain AMBLS11_RS17450 PF04679 ATP dependent DNA ligase C terminal region AMBLS11_RS17455 PF01132 Elongation factor P (EF-P) OB domain AMBLS11_RS17455 PF09285 Elongation factor P, C-terminal AMBLS11_RS17455 PF08207 Elongation factor P (EF-P) KOW-like domain AMBLS11_RS17460 PF00294 pfkB family carbohydrate kinase AMBLS11_RS17470 PF00326 Prolyl oligopeptidase family AMBLS11_RS17475 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS17475 PF00043 Glutathione S-transferase, C-terminal domain AMBLS11_RS17480 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS17490 PF00561 alpha/beta hydrolase fold AMBLS11_RS17505 PF00171 Aldehyde dehydrogenase family AMBLS11_RS17510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMBLS11_RS17510 PF00205 Thiamine pyrophosphate enzyme, central domain AMBLS11_RS17510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMBLS11_RS17520 PF00762 Ferrochelatase AMBLS11_RS17530 PF01145 SPFH domain / Band 7 family AMBLS11_RS17535 PF12221 Bacterial membrane protein N terminal AMBLS11_RS17535 PF01145 SPFH domain / Band 7 family AMBLS11_RS17540 PF13167 GTP-binding GTPase N-terminal AMBLS11_RS17540 PF16360 GTP-binding GTPase Middle Region AMBLS11_RS17540 PF01926 50S ribosome-binding GTPase AMBLS11_RS17545 PF17209 Hfq protein AMBLS11_RS17565 PF01520 N-acetylmuramoyl-L-alanine amidase AMBLS11_RS17570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMBLS11_RS17575 PF01256 Carbohydrate kinase AMBLS11_RS17575 PF03853 YjeF-related protein N-terminus AMBLS11_RS17580 PF08331 Domain of unknown function (DUF1730) AMBLS11_RS17590 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMBLS11_RS17595 PF00293 NUDIX domain AMBLS11_RS17595 PF09297 NADH pyrophosphatase zinc ribbon domain AMBLS11_RS17600 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AMBLS11_RS17605 PF01475 Ferric uptake regulator family AMBLS11_RS17615 PF01894 Uncharacterised protein family UPF0047 AMBLS11_RS17620 PF05736 OprF membrane domain AMBLS11_RS17620 PF00691 OmpA family AMBLS11_RS17625 PF13276 HTH-like domain AMBLS11_RS17625 PF00665 Integrase core domain AMBLS11_RS17625 PF13333 Integrase core domain AMBLS11_RS17635 PF00772 DnaB-like helicase N terminal domain AMBLS11_RS17635 PF03796 DnaB-like helicase C terminal domain AMBLS11_RS17660 PF03473 MOSC domain AMBLS11_RS17660 PF03475 3-alpha domain AMBLS11_RS17675 PF00873 AcrB/AcrD/AcrF family AMBLS11_RS17680 PF01281 Ribosomal protein L9, N-terminal domain AMBLS11_RS17680 PF03948 Ribosomal protein L9, C-terminal domain AMBLS11_RS17685 PF01084 Ribosomal protein S18 AMBLS11_RS17690 PF01250 Ribosomal protein S6 AMBLS11_RS17695 PF00672 HAMP domain AMBLS11_RS17695 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS17705 PF00005 ABC transporter AMBLS11_RS17715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS17715 PF08447 PAS fold AMBLS11_RS17720 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS17720 PF00989 PAS fold AMBLS11_RS17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS17720 PF13188 PAS domain AMBLS11_RS17720 PF13426 PAS domain AMBLS11_RS17725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMBLS11_RS17725 PF00672 HAMP domain AMBLS11_RS17725 PF02743 Cache domain AMBLS11_RS17730 PF03601 Conserved hypothetical protein 698 AMBLS11_RS17735 PF01545 Cation efflux family AMBLS11_RS17735 PF16916 Dimerisation domain of Zinc Transporter AMBLS11_RS17740 PF00722 Glycosyl hydrolases family 16 AMBLS11_RS17750 PF03553 Na+/H+ antiporter family AMBLS11_RS17755 PF03783 Curli production assembly/transport component CsgG AMBLS11_RS17765 PF05643 Putative bacterial lipoprotein (DUF799) AMBLS11_RS17770 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMBLS11_RS17770 PF14310 Fibronectin type III-like domain AMBLS11_RS17770 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBLS11_RS17775 PF07690 Major Facilitator Superfamily AMBLS11_RS17780 PF00232 Glycosyl hydrolase family 1 AMBLS11_RS17785 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS17790 PF00083 Sugar (and other) transporter AMBLS11_RS17795 PF00664 ABC transporter transmembrane region AMBLS11_RS17795 PF00005 ABC transporter AMBLS11_RS17800 PF00005 ABC transporter AMBLS11_RS17800 PF00664 ABC transporter transmembrane region AMBLS11_RS17810 PF02322 Cytochrome bd terminal oxidase subunit II AMBLS11_RS17815 PF01654 Cytochrome bd terminal oxidase subunit I AMBLS11_RS17825 PF00072 Response regulator receiver domain AMBLS11_RS17825 PF00158 Sigma-54 interaction domain AMBLS11_RS17825 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS17845 PF13474 SnoaL-like domain AMBLS11_RS17850 PF02649 Type I GTP cyclohydrolase folE2 AMBLS11_RS17895 PF05532 CsbD-like AMBLS11_RS17910 PF08281 Sigma-70, region 4 AMBLS11_RS17910 PF04542 Sigma-70 region 2 AMBLS11_RS17935 PF00472 RF-1 domain AMBLS11_RS17940 PF00364 Biotin-requiring enzyme AMBLS11_RS17940 PF00561 alpha/beta hydrolase fold AMBLS11_RS17965 PF04264 YceI-like domain AMBLS11_RS17970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMBLS11_RS17975 PF00593 TonB dependent receptor AMBLS11_RS17975 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS17985 PF01048 Phosphorylase superfamily AMBLS11_RS17990 PF03466 LysR substrate binding domain AMBLS11_RS17990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS17995 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMBLS11_RS18000 PF16884 N-terminal domain of oxidoreductase AMBLS11_RS18000 PF00107 Zinc-binding dehydrogenase AMBLS11_RS18005 PF00563 EAL domain AMBLS11_RS18005 PF00360 Phytochrome region AMBLS11_RS18005 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS18005 PF01590 GAF domain AMBLS11_RS18010 PF00072 Response regulator receiver domain AMBLS11_RS18010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS18010 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS18010 PF09308 LuxQ, periplasmic AMBLS11_RS18020 PF00296 Luciferase-like monooxygenase AMBLS11_RS18025 PF01380 SIS domain AMBLS11_RS18030 PF08220 DeoR-like helix-turn-helix domain AMBLS11_RS18030 PF00455 DeoR C terminal sensor domain AMBLS11_RS18035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMBLS11_RS18035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMBLS11_RS18040 PF00132 Bacterial transferase hexapeptide (six repeats) AMBLS11_RS18040 PF14602 Hexapeptide repeat of succinyl-transferase AMBLS11_RS18040 PF12804 MobA-like NTP transferase domain AMBLS11_RS18045 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS18050 PF00892 EamA-like transporter family AMBLS11_RS18055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMBLS11_RS18055 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMBLS11_RS18060 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AMBLS11_RS18060 PF00730 HhH-GPD superfamily base excision DNA repair protein AMBLS11_RS18065 PF00144 Beta-lactamase AMBLS11_RS18070 PF17944 Arginine decarboxylase C-terminal helical extension AMBLS11_RS18070 PF17810 Arginine decarboxylase helical bundle domain AMBLS11_RS18070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMBLS11_RS18080 PF02233 NAD(P) transhydrogenase beta subunit AMBLS11_RS18085 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMBLS11_RS18090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMBLS11_RS18090 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMBLS11_RS18100 PF04820 Tryptophan halogenase AMBLS11_RS18130 PF07715 TonB-dependent Receptor Plug Domain AMBLS11_RS18130 PF00593 TonB dependent receptor AMBLS11_RS18170 PF01040 UbiA prenyltransferase family AMBLS11_RS18175 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AMBLS11_RS18180 PF00510 Cytochrome c oxidase subunit III AMBLS11_RS18185 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMBLS11_RS18190 PF06481 COX Aromatic Rich Motif AMBLS11_RS18190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMBLS11_RS18215 PF00544 Pectate lyase AMBLS11_RS18225 PF13333 Integrase core domain AMBLS11_RS18225 PF13276 HTH-like domain AMBLS11_RS18225 PF00665 Integrase core domain AMBLS11_RS18270 PF00239 Resolvase, N terminal domain AMBLS11_RS18270 PF02796 Helix-turn-helix domain of resolvase AMBLS11_RS18285 PF00118 TCP-1/cpn60 chaperonin family AMBLS11_RS18290 PF00166 Chaperonin 10 Kd subunit AMBLS11_RS18300 PF03091 CutA1 divalent ion tolerance protein AMBLS11_RS18305 PF11412 Disulphide bond corrector protein DsbC AMBLS11_RS18305 PF02683 Cytochrome C biogenesis protein transmembrane region AMBLS11_RS18310 PF01551 Peptidase family M23 AMBLS11_RS18315 PF01220 Dehydroquinase class II AMBLS11_RS18320 PF00364 Biotin-requiring enzyme AMBLS11_RS18325 PF00289 Biotin carboxylase, N-terminal domain AMBLS11_RS18325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMBLS11_RS18325 PF02785 Biotin carboxylase C-terminal domain AMBLS11_RS18350 PF02811 PHP domain AMBLS11_RS18350 PF14579 Helix-hairpin-helix motif AMBLS11_RS18350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMBLS11_RS18350 PF11490 DNA polymerase III polC-type N-terminus II AMBLS11_RS18350 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMBLS11_RS18350 PF00929 Exonuclease AMBLS11_RS18370 PF01355 High potential iron-sulfur protein AMBLS11_RS18375 PF01425 Amidase AMBLS11_RS18390 PF01207 Dihydrouridine synthase (Dus) AMBLS11_RS18395 PF02954 Bacterial regulatory protein, Fis family AMBLS11_RS18400 PF01808 AICARFT/IMPCHase bienzyme AMBLS11_RS18400 PF02142 MGS-like domain AMBLS11_RS18410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMBLS11_RS18410 PF02844 Phosphoribosylglycinamide synthetase, N domain AMBLS11_RS18410 PF02843 Phosphoribosylglycinamide synthetase, C domain AMBLS11_RS18420 PF00027 Cyclic nucleotide-binding domain AMBLS11_RS18420 PF00520 Ion transport protein AMBLS11_RS18425 PF00485 Phosphoribulokinase / Uridine kinase family AMBLS11_RS18435 PF00072 Response regulator receiver domain AMBLS11_RS18435 PF00486 Transcriptional regulatory protein, C terminal AMBLS11_RS18440 PF00512 His Kinase A (phospho-acceptor) domain AMBLS11_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMBLS11_RS18440 PF00672 HAMP domain AMBLS11_RS18450 PF16338 Domain of unknown function (DUF4968) AMBLS11_RS18450 PF17137 Domain of unknown function (DUF5110) AMBLS11_RS18450 PF13802 Galactose mutarotase-like AMBLS11_RS18450 PF01055 Glycosyl hydrolases family 31 AMBLS11_RS18455 PF01293 Phosphoenolpyruvate carboxykinase AMBLS11_RS18460 PF01430 Hsp33 protein AMBLS11_RS18465 PF01479 S4 domain AMBLS11_RS18470 PF11356 Type II secretion system protein C AMBLS11_RS18475 PF00263 Bacterial type II and III secretion system protein AMBLS11_RS18475 PF03958 Bacterial type II/III secretion system short domain AMBLS11_RS18480 PF00437 Type II/IV secretion system protein AMBLS11_RS18485 PF00482 Type II secretion system (T2SS), protein F AMBLS11_RS18490 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS18490 PF08334 Type II secretion system (T2SS), protein G AMBLS11_RS18495 PF12019 Type II transport protein GspH AMBLS11_RS18495 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS18500 PF02501 Type II secretion system (T2SS), protein I AMBLS11_RS18500 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS18505 PF11612 Type II secretion system (T2SS), protein J AMBLS11_RS18505 PF07963 Prokaryotic N-terminal methylation motif AMBLS11_RS18515 PF12693 GspL periplasmic domain AMBLS11_RS18515 PF05134 Type II secretion system (T2SS), protein L AMBLS11_RS18520 PF04612 Type II secretion system (T2SS), protein M AMBLS11_RS18540 PF00171 Aldehyde dehydrogenase family AMBLS11_RS18545 PF01931 Protein of unknown function DUF84 AMBLS11_RS18550 PF13419 Haloacid dehalogenase-like hydrolase AMBLS11_RS18555 PF00293 NUDIX domain AMBLS11_RS18560 PF00459 Inositol monophosphatase family AMBLS11_RS18570 PF00535 Glycosyl transferase family 2 AMBLS11_RS18575 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMBLS11_RS18585 PF06794 Uncharacterised protein family (UPF0270) AMBLS11_RS18590 PF00561 alpha/beta hydrolase fold AMBLS11_RS18600 PF00005 ABC transporter AMBLS11_RS18600 PF12848 ABC transporter AMBLS11_RS18615 PF04102 SlyX AMBLS11_RS18625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMBLS11_RS18625 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMBLS11_RS18635 PF03449 Transcription elongation factor, N-terminal AMBLS11_RS18635 PF01272 Transcription elongation factor, GreA/GreB, C-term AMBLS11_RS18640 PF16921 Tex protein YqgF-like domain AMBLS11_RS18640 PF17674 HHH domain AMBLS11_RS18640 PF09371 Tex-like protein N-terminal domain AMBLS11_RS18640 PF00575 S1 RNA binding domain AMBLS11_RS18645 PF04820 Tryptophan halogenase AMBLS11_RS18665 PF12833 Helix-turn-helix domain AMBLS11_RS18675 PF04616 Glycosyl hydrolases family 43 AMBLS11_RS18700 PF00331 Glycosyl hydrolase family 10 AMBLS11_RS18700 PF00553 Cellulose binding domain AMBLS11_RS18700 PF03422 Carbohydrate binding module (family 6) AMBLS11_RS18705 PF00248 Aldo/keto reductase family AMBLS11_RS18710 PF02779 Transketolase, pyrimidine binding domain AMBLS11_RS18710 PF00456 Transketolase, thiamine diphosphate binding domain AMBLS11_RS18710 PF02780 Transketolase, C-terminal domain AMBLS11_RS18720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMBLS11_RS18720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMBLS11_RS18725 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMBLS11_RS18735 PF01915 Glycosyl hydrolase family 3 C-terminal domain AMBLS11_RS18735 PF00933 Glycosyl hydrolase family 3 N terminal domain AMBLS11_RS18735 PF14310 Fibronectin type III-like domain AMBLS11_RS18740 PF00083 Sugar (and other) transporter AMBLS11_RS18760 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AMBLS11_RS18780 PF00561 alpha/beta hydrolase fold AMBLS11_RS18785 PF00156 Phosphoribosyl transferase domain AMBLS11_RS18795 PF01106 NifU-like domain AMBLS11_RS18795 PF01521 Iron-sulphur cluster biosynthesis AMBLS11_RS18805 PF01177 Asp/Glu/Hydantoin racemase AMBLS11_RS18820 PF01554 MatE AMBLS11_RS18835 PF02630 SCO1/SenC AMBLS11_RS18840 PF01040 UbiA prenyltransferase family AMBLS11_RS18845 PF02628 Cytochrome oxidase assembly protein AMBLS11_RS18865 PF00510 Cytochrome c oxidase subunit III AMBLS11_RS18870 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMBLS11_RS18875 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMBLS11_RS18880 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMBLS11_RS18880 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMBLS11_RS18885 PF01548 Transposase AMBLS11_RS18885 PF02371 Transposase IS116/IS110/IS902 family AMBLS11_RS18890 PF00717 Peptidase S24-like AMBLS11_RS18890 PF01726 LexA DNA binding domain AMBLS11_RS18895 PF17151 Periplasmic sensor domain AMBLS11_RS18895 PF00990 Diguanylate cyclase, GGDEF domain AMBLS11_RS18900 PF01553 Acyltransferase AMBLS11_RS18905 PF00291 Pyridoxal-phosphate dependent enzyme AMBLS11_RS18905 PF00585 C-terminal regulatory domain of Threonine dehydratase AMBLS11_RS18910 PF00920 Dehydratase family AMBLS11_RS18915 PF03458 UPF0126 domain AMBLS11_RS18920 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMBLS11_RS18920 PF01078 Magnesium chelatase, subunit ChlI AMBLS11_RS18925 PF03466 LysR substrate binding domain AMBLS11_RS18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMBLS11_RS18930 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMBLS11_RS18930 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMBLS11_RS18935 PF07690 Major Facilitator Superfamily AMBLS11_RS18940 PF00326 Prolyl oligopeptidase family AMBLS11_RS18945 PF17243 POTRA domain TamA domain 1 AMBLS11_RS18945 PF01103 Surface antigen AMBLS11_RS18950 PF04357 TamB, inner membrane protein subunit of TAM complex AMBLS11_RS18975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMBLS11_RS18975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMBLS11_RS18985 PF00696 Amino acid kinase family AMBLS11_RS18985 PF01472 PUA domain AMBLS11_RS19005 PF03109 ABC1 family AMBLS11_RS19030 PF01979 Amidohydrolase family AMBLS11_RS19055 PF01206 Sulfurtransferase TusA AMBLS11_RS19060 PF00156 Phosphoribosyl transferase domain AMBLS11_RS19065 PF03725 3' exoribonuclease family, domain 2 AMBLS11_RS19065 PF01138 3' exoribonuclease family, domain 1 AMBLS11_RS19080 PF04820 Tryptophan halogenase AMBLS11_RS19085 PF04820 Tryptophan halogenase AMBLS11_RS19095 PF00232 Glycosyl hydrolase family 1 AMBLS11_RS19105 PF00356 Bacterial regulatory proteins, lacI family AMBLS11_RS19120 PF05736 OprF membrane domain AMBLS11_RS19120 PF00691 OmpA family AMBLS11_RS19125 PF01966 HD domain AMBLS11_RS19140 PF00043 Glutathione S-transferase, C-terminal domain AMBLS11_RS19140 PF02798 Glutathione S-transferase, N-terminal domain AMBLS11_RS19155 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMBLS11_RS19155 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMBLS11_RS19160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMBLS11_RS19160 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMBLS11_RS19165 PF00231 ATP synthase AMBLS11_RS19170 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMBLS11_RS19170 PF00306 ATP synthase alpha/beta chain, C terminal domain AMBLS11_RS19170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMBLS11_RS19175 PF00213 ATP synthase delta (OSCP) subunit AMBLS11_RS19180 PF00430 ATP synthase B/B' CF(0) AMBLS11_RS19185 PF00137 ATP synthase subunit C AMBLS11_RS19190 PF00119 ATP synthase A chain AMBLS11_RS19200 PF02195 ParB-like nuclease domain AMBLS11_RS19200 PF17762 HTH domain found in ParB protein AMBLS11_RS19205 PF13614 AAA domain AMBLS11_RS19210 PF02527 rRNA small subunit methyltransferase G AMBLS11_RS19215 PF01134 Glucose inhibited division protein A AMBLS11_RS19215 PF13932 GidA associated domain AMBLS11_RS19230 PF00258 Flavodoxin AMBLS11_RS19235 PF01926 50S ribosome-binding GTPase AMBLS11_RS19235 PF12631 MnmE helical domain AMBLS11_RS19235 PF10396 GTP-binding protein TrmE N-terminus AMBLS11_RS19240 PF04461 Protein of unknown function (DUF520) AMBLS11_RS19245 PF02096 60Kd inner membrane protein AMBLS11_RS19245 PF14849 YidC periplasmic domain AMBLS11_RS19250 PF00825 Ribonuclease P AMBLS11_RS19265 PF06580 Histidine kinase AMBLS11_RS19270 PF08666 SAF domain AMBLS11_RS19270 PF03102 NeuB family AMBLS11_RS19320 PF00535 Glycosyl transferase family 2 AMBLS11_RS19350 PF00883 Cytosol aminopeptidase family, catalytic domain AMBLS11_RS19350 PF02789 Cytosol aminopeptidase family, N-terminal domain