locus-tag class description MADE_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MADE_RS00010 PF02767 DNA polymerase III beta subunit, central domain MADE_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MADE_RS00015 PF02463 RecF/RecN/SMC N terminal domain MADE_RS00020 PF00204 DNA gyrase B MADE_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus MADE_RS00020 PF18053 DNA gyrase B subunit insert domain MADE_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS00020 PF01751 Toprim domain MADE_RS00030 PF05746 DALR anticodon binding domain MADE_RS00030 PF02092 Glycyl-tRNA synthetase beta subunit MADE_RS00035 PF02091 Glycyl-tRNA synthetase alpha subunit MADE_RS00040 PF03352 Methyladenine glycosylase MADE_RS00050 PF04220 Der GTPase activator (YihI) MADE_RS00060 PF00034 Cytochrome c MADE_RS00065 PF01926 50S ribosome-binding GTPase MADE_RS00070 PF01367 5'-3' exonuclease, C-terminal SAM fold MADE_RS00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MADE_RS00070 PF00476 DNA polymerase family A MADE_RS00070 PF01612 3'-5' exonuclease MADE_RS00080 PF02386 Cation transport protein MADE_RS00085 PF02254 TrkA-N domain MADE_RS00085 PF02080 TrkA-C domain MADE_RS00090 PF01189 16S rRNA methyltransferase RsmB/F MADE_RS00090 PF01029 NusB family MADE_RS00095 PF02911 Formyl transferase, C-terminal domain MADE_RS00095 PF00551 Formyl transferase MADE_RS00100 PF01327 Polypeptide deformylase MADE_RS00110 PF02481 DNA recombination-mediator protein A MADE_RS00110 PF17782 DprA winged helix domain MADE_RS00115 PF04361 Protein of unknown function (DUF494) MADE_RS00125 PF01300 Telomere recombination MADE_RS00130 PF01218 Coproporphyrinogen III oxidase MADE_RS00135 PF03922 OmpW family MADE_RS00145 PF08501 Shikimate dehydrogenase substrate binding domain MADE_RS00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MADE_RS00145 PF01488 Shikimate / quinate 5-dehydrogenase MADE_RS00150 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS00180 PF09411 Lipid A 3-O-deacylase (PagL) MADE_RS00195 PF01336 OB-fold nucleic acid binding domain MADE_RS00195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MADE_RS00195 PF07733 Bacterial DNA polymerase III alpha NTPase domain MADE_RS00195 PF14579 Helix-hairpin-helix motif MADE_RS00195 PF02811 PHP domain MADE_RS00225 PF04389 Peptidase family M28 MADE_RS00225 PF02225 PA domain MADE_RS00230 PF00535 Glycosyl transferase family 2 MADE_RS00235 PF00440 Bacterial regulatory proteins, tetR family MADE_RS00240 PF04127 DNA / pantothenate metabolism flavoprotein MADE_RS00240 PF02441 Flavoprotein MADE_RS00245 PF04002 RadC-like JAB domain MADE_RS00265 PF06082 Exopolysaccharide biosynthesis protein YbjH MADE_RS00270 PF00830 Ribosomal L28 family MADE_RS00275 PF00471 Ribosomal protein L33 MADE_RS00285 PF06827 Zinc finger found in FPG and IleRS MADE_RS00285 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MADE_RS00285 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MADE_RS00290 PF01467 Cytidylyltransferase-like MADE_RS00300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MADE_RS00315 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS00315 PF03707 Bacterial signalling protein N terminal repeat MADE_RS00315 PF00563 EAL domain MADE_RS00320 PF00155 Aminotransferase class I and II MADE_RS00325 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS00325 PF00107 Zinc-binding dehydrogenase MADE_RS00330 PF00581 Rhodanese-like domain MADE_RS00335 PF01694 Rhomboid family MADE_RS00335 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MADE_RS00345 PF04345 Chorismate lyase MADE_RS00350 PF01040 UbiA prenyltransferase family MADE_RS00365 PF04380 Membrane fusogenic activity MADE_RS00370 PF00580 UvrD/REP helicase N-terminal domain MADE_RS00370 PF13361 UvrD-like helicase C-terminal domain MADE_RS00375 PF03707 Bacterial signalling protein N terminal repeat MADE_RS00375 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS00375 PF00563 EAL domain MADE_RS00380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MADE_RS00400 PF03553 Na+/H+ antiporter family MADE_RS00410 PF04143 Sulphur transport MADE_RS00415 PF02082 Transcriptional regulator MADE_RS00420 PF01925 Sulfite exporter TauE/SafE MADE_RS00425 PF00753 Metallo-beta-lactamase superfamily MADE_RS00435 PF07715 TonB-dependent Receptor Plug Domain MADE_RS00435 PF00593 TonB dependent receptor MADE_RS00450 PF00005 ABC transporter MADE_RS00450 PF00664 ABC transporter transmembrane region MADE_RS00455 PF00664 ABC transporter transmembrane region MADE_RS00455 PF00005 ABC transporter MADE_RS00465 PF01654 Cytochrome bd terminal oxidase subunit I MADE_RS00470 PF00581 Rhodanese-like domain MADE_RS00470 PF01206 Sulfurtransferase TusA MADE_RS00475 PF00753 Metallo-beta-lactamase superfamily MADE_RS00480 PF10417 C-terminal domain of 1-Cys peroxiredoxin MADE_RS00480 PF00578 AhpC/TSA family MADE_RS00490 PF00578 AhpC/TSA family MADE_RS00510 PF00873 AcrB/AcrD/AcrF family MADE_RS00520 PF02028 BCCT, betaine/carnitine/choline family transporter MADE_RS00565 PF02463 RecF/RecN/SMC N terminal domain MADE_RS00565 PF06470 SMC proteins Flexible Hinge Domain MADE_RS00595 PF00266 Aminotransferase class-V MADE_RS00630 PF13533 Biotin-lipoyl like MADE_RS00645 PF07715 TonB-dependent Receptor Plug Domain MADE_RS00645 PF00593 TonB dependent receptor MADE_RS00655 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS00655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS00655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS00660 PF03466 LysR substrate binding domain MADE_RS00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS00665 PF00753 Metallo-beta-lactamase superfamily MADE_RS00670 PF04317 YcjX-like family, DUF463 MADE_RS00685 PF04055 Radical SAM superfamily MADE_RS00685 PF06968 Biotin and Thiamin Synthesis associated domain MADE_RS00690 PF05690 Thiazole biosynthesis protein ThiG MADE_RS00700 PF00899 ThiF family MADE_RS00705 PF02581 Thiamine monophosphate synthase MADE_RS00710 PF13667 ThiC-associated domain MADE_RS00710 PF01964 Radical SAM ThiC family MADE_RS00715 PF07219 HemY protein N-terminus MADE_RS00715 PF07719 Tetratricopeptide repeat MADE_RS00720 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MADE_RS00725 PF02602 Uroporphyrinogen-III synthase HemD MADE_RS00730 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MADE_RS00730 PF03900 Porphobilinogen deaminase, C-terminal domain MADE_RS00735 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS00735 PF17151 Periplasmic sensor domain MADE_RS00745 PF00625 Guanylate kinase MADE_RS00750 PF01192 RNA polymerase Rpb6 MADE_RS00755 PF13291 ACT domain MADE_RS00755 PF04607 Region found in RelA / SpoT proteins MADE_RS00755 PF02824 TGS domain MADE_RS00760 PF01042 Endoribonuclease L-PSP MADE_RS00765 PF00588 SpoU rRNA Methylase family MADE_RS00765 PF12105 SpoU, rRNA methylase, C-terminal MADE_RS00770 PF00271 Helicase conserved C-terminal domain MADE_RS00770 PF17191 RecG wedge domain MADE_RS00770 PF00270 DEAD/DEAH box helicase MADE_RS00775 PF04445 Putative SAM-dependent methyltransferase MADE_RS00780 PF08534 Redoxin MADE_RS00795 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS00800 PF00005 ABC transporter MADE_RS00800 PF08402 TOBE domain MADE_RS00805 PF05552 Conserved TM helix MADE_RS00805 PF00924 Mechanosensitive ion channel MADE_RS00845 PF04940 Sensors of blue-light using FAD MADE_RS00845 PF00563 EAL domain MADE_RS00850 PF03466 LysR substrate binding domain MADE_RS00850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS00855 PF01810 LysE type translocator MADE_RS00860 PF00893 Small Multidrug Resistance protein MADE_RS00875 PF00529 HlyD membrane-fusion protein of T1SS MADE_RS00875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS00880 PF00873 AcrB/AcrD/AcrF family MADE_RS00890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MADE_RS00890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MADE_RS00895 PF00850 Histone deacetylase domain MADE_RS00910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS00910 PF00672 HAMP domain MADE_RS00910 PF12729 Four helix bundle sensory module for signal transduction MADE_RS00920 PF11737 Protein of unknown function (DUF3300) MADE_RS00925 PF00925 GTP cyclohydrolase II MADE_RS00930 PF08448 PAS fold MADE_RS00930 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS00930 PF00563 EAL domain MADE_RS00945 PF00270 DEAD/DEAH box helicase MADE_RS00945 PF00271 Helicase conserved C-terminal domain MADE_RS00945 PF00570 HRDC domain MADE_RS00945 PF16124 RecQ zinc-binding MADE_RS00945 PF09382 RQC domain MADE_RS00950 PF01769 Divalent cation transporter MADE_RS00950 PF00571 CBS domain MADE_RS00950 PF03448 MgtE intracellular N domain MADE_RS00955 PF00892 EamA-like transporter family MADE_RS00960 PF00072 Response regulator receiver domain MADE_RS00960 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS00965 PF00580 UvrD/REP helicase N-terminal domain MADE_RS00965 PF13361 UvrD-like helicase C-terminal domain MADE_RS00970 PF06426 Serine acetyltransferase, N-terminal MADE_RS00970 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS00975 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS00980 PF02899 Phage integrase, N-terminal SAM-like domain MADE_RS00980 PF00589 Phage integrase family MADE_RS00990 PF01678 Diaminopimelate epimerase MADE_RS00995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MADE_RS00995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MADE_RS01010 PF01569 PAP2 superfamily MADE_RS01015 PF03737 Aldolase/RraA MADE_RS01025 PF02441 Flavoprotein MADE_RS01030 PF08245 Mur ligase middle domain MADE_RS01030 PF01225 Mur ligase family, catalytic domain MADE_RS01030 PF02875 Mur ligase family, glutamate ligase domain MADE_RS01035 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MADE_RS01040 PF00719 Inorganic pyrophosphatase MADE_RS01070 PF00005 ABC transporter MADE_RS01070 PF17760 UvrA interaction domain MADE_RS01070 PF17755 UvrA DNA-binding domain MADE_RS01075 PF07690 Major Facilitator Superfamily MADE_RS01080 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS01095 PF00356 Bacterial regulatory proteins, lacI family MADE_RS01105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MADE_RS01105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MADE_RS01110 PF10509 Galactokinase galactose-binding signature MADE_RS01110 PF00288 GHMP kinases N terminal domain MADE_RS01110 PF08544 GHMP kinases C terminal MADE_RS01120 PF00474 Sodium:solute symporter family MADE_RS01125 PF00436 Single-strand binding protein family MADE_RS01140 PF16363 GDP-mannose 4,6 dehydratase MADE_RS01145 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MADE_RS01145 PF00703 Glycosyl hydrolases family 2 MADE_RS01145 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MADE_RS01145 PF02837 Glycosyl hydrolases family 2, sugar binding domain MADE_RS01145 PF16355 Domain of unknown function (DUF4982) MADE_RS01160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MADE_RS01160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MADE_RS01165 PF08220 DeoR-like helix-turn-helix domain MADE_RS01165 PF00455 DeoR C terminal sensor domain MADE_RS01170 PF01266 FAD dependent oxidoreductase MADE_RS01170 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MADE_RS01205 PF00263 Bacterial type II and III secretion system protein MADE_RS01205 PF03958 Bacterial type II/III secretion system short domain MADE_RS01210 PF01471 Putative peptidoglycan binding domain MADE_RS01210 PF13401 AAA domain MADE_RS01220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MADE_RS01220 PF00437 Type II/IV secretion system protein MADE_RS01225 PF00482 Type II secretion system (T2SS), protein F MADE_RS01235 PF07963 Prokaryotic N-terminal methylation motif MADE_RS01240 PF07963 Prokaryotic N-terminal methylation motif MADE_RS01245 PF07963 Prokaryotic N-terminal methylation motif MADE_RS01275 PF04085 rod shape-determining protein MreC MADE_RS01280 PF04093 rod shape-determining protein MreD MADE_RS01285 PF02545 Maf-like protein MADE_RS01290 PF10150 Ribonuclease E/G family MADE_RS01290 PF00575 S1 RNA binding domain MADE_RS01300 PF00795 Carbon-nitrogen hydrolase MADE_RS01305 PF01523 Putative modulator of DNA gyrase MADE_RS01310 PF04751 Protein of unknown function (DUF615) MADE_RS01315 PF01523 Putative modulator of DNA gyrase MADE_RS01325 PF00703 Glycosyl hydrolases family 2 MADE_RS01325 PF02929 Beta galactosidase small chain MADE_RS01325 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MADE_RS01325 PF02837 Glycosyl hydrolases family 2, sugar binding domain MADE_RS01325 PF16353 Domain of unknown function(DUF4981) MADE_RS01330 PF00072 Response regulator receiver domain MADE_RS01330 PF00486 Transcriptional regulatory protein, C terminal MADE_RS01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS01335 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS01335 PF00497 Bacterial extracellular solute-binding proteins, family 3 MADE_RS01340 PF00534 Glycosyl transferases group 1 MADE_RS01340 PF08323 Starch synthase catalytic domain MADE_RS01345 PF05175 Methyltransferase small domain MADE_RS01345 PF08468 Methyltransferase small domain N-terminal MADE_RS01350 PF02390 Putative methyltransferase MADE_RS01355 PF00561 alpha/beta hydrolase fold MADE_RS01360 PF14815 NUDIX domain MADE_RS01360 PF00730 HhH-GPD superfamily base excision DNA repair protein MADE_RS01360 PF00633 Helix-hairpin-helix motif MADE_RS01365 PF04362 Bacterial Fe(2+) trafficking MADE_RS01385 PF00145 C-5 cytosine-specific DNA methylase MADE_RS01395 PF01751 Toprim domain MADE_RS01395 PF01131 DNA topoisomerase MADE_RS01395 PF01396 Topoisomerase DNA binding C4 zinc finger MADE_RS01425 PF00589 Phage integrase family MADE_RS01425 PF02899 Phage integrase, N-terminal SAM-like domain MADE_RS01445 PF18255 DNA processing protein A sterile alpha motif domain MADE_RS01445 PF02481 DNA recombination-mediator protein A MADE_RS01475 PF00873 AcrB/AcrD/AcrF family MADE_RS01490 PF01435 Peptidase family M48 MADE_RS01510 PF02911 Formyl transferase, C-terminal domain MADE_RS01510 PF00551 Formyl transferase MADE_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS01515 PF00672 HAMP domain MADE_RS01515 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS01520 PF00072 Response regulator receiver domain MADE_RS01520 PF00486 Transcriptional regulatory protein, C terminal MADE_RS01535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS01540 PF00873 AcrB/AcrD/AcrF family MADE_RS01585 PF08031 Berberine and berberine like MADE_RS01585 PF01565 FAD binding domain MADE_RS01610 PF00042 Globin MADE_RS01610 PF00175 Oxidoreductase NAD-binding domain MADE_RS01610 PF00970 Oxidoreductase FAD-binding domain MADE_RS01630 PF01750 Hydrogenase maturation protease MADE_RS01640 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MADE_RS01640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MADE_RS01645 PF00374 Nickel-dependent hydrogenase MADE_RS01655 PF01455 HupF/HypC family MADE_RS01660 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MADE_RS01665 PF02492 CobW/HypB/UreG, nucleotide-binding domain MADE_RS01670 PF01924 Hydrogenase formation hypA family MADE_RS01675 PF07503 HypF finger MADE_RS01675 PF01300 Telomere recombination MADE_RS01675 PF17788 HypF Kae1-like domain MADE_RS01675 PF00708 Acylphosphatase MADE_RS01680 PF02769 AIR synthase related protein, C-terminal domain MADE_RS01680 PF00586 AIR synthase related protein, N-terminal domain MADE_RS01685 PF00376 MerR family regulatory protein MADE_RS01685 PF09278 MerR, DNA binding MADE_RS01690 PF00403 Heavy-metal-associated domain MADE_RS01775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS01775 PF00529 HlyD membrane-fusion protein of T1SS MADE_RS01780 PF00873 AcrB/AcrD/AcrF family MADE_RS01785 PF16916 Dimerisation domain of Zinc Transporter MADE_RS01785 PF01545 Cation efflux family MADE_RS01795 PF01219 Prokaryotic diacylglycerol kinase MADE_RS01800 PF08019 Phosphoethanolamine transferase EptA/EptB MADE_RS01800 PF00884 Sulfatase MADE_RS01810 PF00884 Sulfatase MADE_RS01810 PF08019 Phosphoethanolamine transferase EptA/EptB MADE_RS01815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MADE_RS01825 PF00535 Glycosyl transferase family 2 MADE_RS01830 PF00486 Transcriptional regulatory protein, C terminal MADE_RS01830 PF00072 Response regulator receiver domain MADE_RS01835 PF00672 HAMP domain MADE_RS01835 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS01865 PF00551 Formyl transferase MADE_RS01865 PF02911 Formyl transferase, C-terminal domain MADE_RS01875 PF00376 MerR family regulatory protein MADE_RS01875 PF09278 MerR, DNA binding MADE_RS01880 PF00403 Heavy-metal-associated domain MADE_RS01915 PF13520 Amino acid permease MADE_RS01925 PF00394 Multicopper oxidase MADE_RS01925 PF07731 Multicopper oxidase MADE_RS01925 PF07732 Multicopper oxidase MADE_RS01950 PF17200 Single Cache domain 2 MADE_RS01950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS01950 PF00672 HAMP domain MADE_RS01955 PF00072 Response regulator receiver domain MADE_RS01960 PF01627 Hpt domain MADE_RS01960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS01960 PF02895 Signal transducing histidine kinase, homodimeric domain MADE_RS01960 PF09078 CheY binding MADE_RS01960 PF01584 CheW-like domain MADE_RS01965 PF01584 CheW-like domain MADE_RS01970 PF03975 CheD chemotactic sensory transduction MADE_RS01975 PF00072 Response regulator receiver domain MADE_RS01975 PF01339 CheB methylesterase MADE_RS02010 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS02015 PF13426 PAS domain MADE_RS02015 PF08448 PAS fold MADE_RS02015 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS02015 PF00072 Response regulator receiver domain MADE_RS02030 PF00356 Bacterial regulatory proteins, lacI family MADE_RS02035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MADE_RS02035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MADE_RS02045 PF03825 Nucleoside H+ symporter MADE_RS02050 PF01261 Xylose isomerase-like TIM barrel MADE_RS02055 PF05199 GMC oxidoreductase MADE_RS02055 PF00732 GMC oxidoreductase MADE_RS02070 PF00465 Iron-containing alcohol dehydrogenase MADE_RS02090 PF01063 Amino-transferase class IV MADE_RS02095 PF00300 Histidine phosphatase superfamily (branch 1) MADE_RS02105 PF00694 Aconitase C-terminal domain MADE_RS02105 PF00330 Aconitase family (aconitate hydratase) MADE_RS02115 PF00437 Type II/IV secretion system protein MADE_RS02115 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MADE_RS02120 PF00338 Ribosomal protein S10p/S20e MADE_RS02125 PF00297 Ribosomal protein L3 MADE_RS02130 PF00573 Ribosomal protein L4/L1 family MADE_RS02135 PF00276 Ribosomal protein L23 MADE_RS02140 PF03947 Ribosomal Proteins L2, C-terminal domain MADE_RS02140 PF00181 Ribosomal Proteins L2, RNA binding domain MADE_RS02145 PF00203 Ribosomal protein S19 MADE_RS02150 PF00237 Ribosomal protein L22p/L17e MADE_RS02155 PF07650 KH domain MADE_RS02155 PF00189 Ribosomal protein S3, C-terminal domain MADE_RS02160 PF00252 Ribosomal protein L16p/L10e MADE_RS02165 PF00831 Ribosomal L29 protein MADE_RS02170 PF00366 Ribosomal protein S17 MADE_RS02185 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MADE_RS02190 PF13439 Glycosyltransferase Family 4 MADE_RS02190 PF00534 Glycosyl transferases group 1 MADE_RS02200 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MADE_RS02200 PF00534 Glycosyl transferases group 1 MADE_RS02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS02220 PF02743 Cache domain MADE_RS02220 PF00672 HAMP domain MADE_RS02225 PF01432 Peptidase family M3 MADE_RS02235 PF01842 ACT domain MADE_RS02235 PF00551 Formyl transferase MADE_RS02245 PF04408 Helicase associated domain (HA2) MADE_RS02245 PF00270 DEAD/DEAH box helicase MADE_RS02245 PF00271 Helicase conserved C-terminal domain MADE_RS02245 PF08482 ATP-dependent helicase C-terminal MADE_RS02250 PF13406 Transglycosylase SLT domain MADE_RS02255 PF14814 Bifunctional transglycosylase second domain MADE_RS02255 PF00912 Transglycosylase MADE_RS02255 PF00905 Penicillin binding protein transpeptidase domain MADE_RS02265 PF05661 Protein of unknown function (DUF808) MADE_RS02270 PF12833 Helix-turn-helix domain MADE_RS02280 PF00543 Nitrogen regulatory protein P-II MADE_RS02285 PF00909 Ammonium Transporter Family MADE_RS02295 PF04261 Dyp-type peroxidase family MADE_RS02300 PF00672 HAMP domain MADE_RS02300 PF00211 Adenylate and Guanylate cyclase catalytic domain MADE_RS02305 PF00202 Aminotransferase class-III MADE_RS02310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MADE_RS02310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MADE_RS02325 PF00873 AcrB/AcrD/AcrF family MADE_RS02335 PF01627 Hpt domain MADE_RS02335 PF00072 Response regulator receiver domain MADE_RS02335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS02335 PF00672 HAMP domain MADE_RS02335 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS02340 PF00521 DNA gyrase/topoisomerase IV, subunit A MADE_RS02340 PF03989 DNA gyrase C-terminal domain, beta-propeller MADE_RS02350 PF03707 Bacterial signalling protein N terminal repeat MADE_RS02350 PF00563 EAL domain MADE_RS02350 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS02350 PF13188 PAS domain MADE_RS02360 PF00171 Aldehyde dehydrogenase family MADE_RS02365 PF04958 Arginine N-succinyltransferase beta subunit MADE_RS02370 PF00202 Aminotransferase class-III MADE_RS02380 PF00117 Glutamine amidotransferase class-I MADE_RS02385 PF00579 tRNA synthetases class I (W and Y) MADE_RS02390 PF00834 Ribulose-phosphate 3 epimerase family MADE_RS02410 PF02086 D12 class N6 adenine-specific DNA methyltransferase MADE_RS02420 PF01761 3-dehydroquinate synthase MADE_RS02425 PF01202 Shikimate kinase MADE_RS02430 PF00263 Bacterial type II and III secretion system protein MADE_RS02430 PF03958 Bacterial type II/III secretion system short domain MADE_RS02430 PF07660 Secretin and TonB N terminus short domain MADE_RS02430 PF11741 AMIN domain MADE_RS02440 PF04350 Pilus assembly protein, PilO MADE_RS02445 PF05137 Fimbrial assembly protein (PilN) MADE_RS02450 PF11104 Type IV pilus assembly protein PilM; MADE_RS02455 PF17092 Penicillin-binding protein OB-like domain MADE_RS02455 PF00905 Penicillin binding protein transpeptidase domain MADE_RS02455 PF00912 Transglycosylase MADE_RS02460 PF00390 Malic enzyme, N-terminal domain MADE_RS02460 PF03949 Malic enzyme, NAD binding domain MADE_RS02470 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS02480 PF00199 Catalase MADE_RS02480 PF06628 Catalase-related immune-responsive MADE_RS02495 PF00563 EAL domain MADE_RS02495 PF03707 Bacterial signalling protein N terminal repeat MADE_RS02495 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS02500 PF00696 Amino acid kinase family MADE_RS02500 PF00583 Acetyltransferase (GNAT) family MADE_RS02505 PF14698 Argininosuccinate lyase C-terminal MADE_RS02505 PF00206 Lyase MADE_RS02510 PF00764 Arginosuccinate synthase MADE_RS02515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MADE_RS02515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MADE_RS02520 PF00696 Amino acid kinase family MADE_RS02525 PF01118 Semialdehyde dehydrogenase, NAD binding domain MADE_RS02525 PF02774 Semialdehyde dehydrogenase, dimerisation domain MADE_RS02530 PF02142 MGS-like domain MADE_RS02540 PF00486 Transcriptional regulatory protein, C terminal MADE_RS02540 PF00072 Response regulator receiver domain MADE_RS02545 PF00672 HAMP domain MADE_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS02545 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS02545 PF16527 Two-component sensor protein CpxA, periplasmic domain MADE_RS02550 PF12146 Serine aminopeptidase, S33 MADE_RS02555 PF00588 SpoU rRNA Methylase family MADE_RS02565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MADE_RS02565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MADE_RS02570 PF02556 Preprotein translocase subunit SecB MADE_RS02575 PF00462 Glutaredoxin MADE_RS02580 PF00581 Rhodanese-like domain MADE_RS02585 PF01551 Peptidase family M23 MADE_RS02590 PF04748 Divergent polysaccharide deacetylase MADE_RS02610 PF02666 Phosphatidylserine decarboxylase MADE_RS02615 PF03193 RsgA GTPase MADE_RS02620 PF00929 Exonuclease MADE_RS02640 PF07715 TonB-dependent Receptor Plug Domain MADE_RS02640 PF00593 TonB dependent receptor MADE_RS02655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MADE_RS02655 PF00205 Thiamine pyrophosphate enzyme, central domain MADE_RS02655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MADE_RS02660 PF10369 Small subunit of acetolactate synthase MADE_RS02670 PF02416 mttA/Hcf106 family MADE_RS02675 PF02416 mttA/Hcf106 family MADE_RS02680 PF00902 Sec-independent protein translocase protein (TatC) MADE_RS02690 PF01026 TatD related DNase MADE_RS02695 PF01590 GAF domain MADE_RS02695 PF00563 EAL domain MADE_RS02695 PF00360 Phytochrome region MADE_RS02695 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS02700 PF00490 Delta-aminolevulinic acid dehydratase MADE_RS02705 PF02541 Ppx/GppA phosphatase family MADE_RS02710 PF00270 DEAD/DEAH box helicase MADE_RS02710 PF00271 Helicase conserved C-terminal domain MADE_RS02715 PF00085 Thioredoxin MADE_RS02720 PF07497 Rho termination factor, RNA-binding domain MADE_RS02720 PF07498 Rho termination factor, N-terminal domain MADE_RS02720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MADE_RS02725 PF01546 Peptidase family M20/M25/M40 MADE_RS02725 PF07687 Peptidase dimerisation domain MADE_RS02730 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS02730 PF09308 LuxQ, periplasmic MADE_RS02730 PF00072 Response regulator receiver domain MADE_RS02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS02735 PF06965 Na+/H+ antiporter 1 MADE_RS02740 PF00731 AIR carboxylase MADE_RS02745 PF02222 ATP-grasp domain MADE_RS02745 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MADE_RS02760 PF00210 Ferritin-like domain MADE_RS02765 PF07995 Glucose / Sorbosone dehydrogenase MADE_RS02770 PF00326 Prolyl oligopeptidase family MADE_RS02770 PF07676 WD40-like Beta Propeller Repeat MADE_RS02780 PF00085 Thioredoxin MADE_RS02795 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MADE_RS02800 PF00709 Adenylosuccinate synthetase MADE_RS02805 PF00171 Aldehyde dehydrogenase family MADE_RS02825 PF03553 Na+/H+ antiporter family MADE_RS02830 PF00933 Glycosyl hydrolase family 3 N terminal domain MADE_RS02840 PF07075 Protein of unknown function (DUF1343) MADE_RS02845 PF01380 SIS domain MADE_RS02850 PF00842 Alanine racemase, C-terminal domain MADE_RS02850 PF01168 Alanine racemase, N-terminal domain MADE_RS02855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MADE_RS02890 PF03831 PhnA domain MADE_RS02890 PF08274 PhnA Zinc-Ribbon MADE_RS02895 PF00583 Acetyltransferase (GNAT) family MADE_RS02925 PF01381 Helix-turn-helix MADE_RS02930 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB MADE_RS02940 PF05016 ParE toxin of type II toxin-antitoxin system, parDE MADE_RS02985 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MADE_RS03030 PF01548 Transposase MADE_RS03030 PF02371 Transposase IS116/IS110/IS902 family MADE_RS03135 PF02371 Transposase IS116/IS110/IS902 family MADE_RS03135 PF01548 Transposase MADE_RS03170 PF13495 Phage integrase, N-terminal SAM-like domain MADE_RS03170 PF00589 Phage integrase family MADE_RS03175 PF00108 Thiolase, N-terminal domain MADE_RS03175 PF02803 Thiolase, C-terminal domain MADE_RS03180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MADE_RS03180 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS03180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MADE_RS03185 PF01464 Transglycosylase SLT domain MADE_RS03185 PF14718 Soluble lytic murein transglycosylase L domain MADE_RS03190 PF00557 Metallopeptidase family M24 MADE_RS03200 PF00348 Polyprenyl synthetase MADE_RS03205 PF00829 Ribosomal prokaryotic L21 protein MADE_RS03210 PF01016 Ribosomal L27 protein MADE_RS03215 PF01926 50S ribosome-binding GTPase MADE_RS03215 PF01018 GTP1/OBG MADE_RS03220 PF00186 Dihydrofolate reductase MADE_RS03225 PF04542 Sigma-70 region 2 MADE_RS03225 PF04539 Sigma-70 region 3 MADE_RS03225 PF00140 Sigma-70 factor, region 1.2 MADE_RS03225 PF04545 Sigma-70, region 4 MADE_RS03230 PF01476 LysM domain MADE_RS03230 PF01551 Peptidase family M23 MADE_RS03235 PF09335 SNARE associated Golgi protein MADE_RS03245 PF01142 tRNA pseudouridine synthase D (TruD) MADE_RS03250 PF02542 YgbB family MADE_RS03255 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MADE_RS03260 PF04977 Septum formation initiator MADE_RS03270 PF17200 Single Cache domain 2 MADE_RS03270 PF00672 HAMP domain MADE_RS03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS03275 PF01619 Proline dehydrogenase MADE_RS03275 PF14850 DNA-binding domain of Proline dehydrogenase MADE_RS03275 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MADE_RS03275 PF00171 Aldehyde dehydrogenase family MADE_RS03300 PF02976 DNA mismatch repair enzyme MutH MADE_RS03305 PF00293 NUDIX domain MADE_RS03310 PF02896 PEP-utilising enzyme, TIM barrel domain MADE_RS03310 PF00391 PEP-utilising enzyme, mobile domain MADE_RS03310 PF05524 PEP-utilising enzyme, N-terminal MADE_RS03310 PF01590 GAF domain MADE_RS03315 PF01925 Sulfite exporter TauE/SafE MADE_RS03320 PF01790 Prolipoprotein diacylglyceryl transferase MADE_RS03325 PF00303 Thymidylate synthase MADE_RS03330 PF00072 Response regulator receiver domain MADE_RS03335 PF00072 Response regulator receiver domain MADE_RS03335 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS03340 PF07690 Major Facilitator Superfamily MADE_RS03355 PF00849 RNA pseudouridylate synthase MADE_RS03360 PF00271 Helicase conserved C-terminal domain MADE_RS03360 PF12137 RNA polymerase recycling family C-terminal MADE_RS03360 PF18339 RapA N-terminal Tudor like domain 1 MADE_RS03360 PF00176 SNF2 family N-terminal domain MADE_RS03360 PF18337 RapA N-terminal Tudor like domain MADE_RS03370 PF13638 PIN domain MADE_RS03370 PF02562 PhoH-like protein MADE_RS03380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MADE_RS03380 PF10414 Sirohaem synthase dimerisation region MADE_RS03385 PF00271 Helicase conserved C-terminal domain MADE_RS03385 PF12343 Cold shock protein DEAD box A MADE_RS03385 PF00270 DEAD/DEAH box helicase MADE_RS03385 PF03880 DbpA RNA binding domain MADE_RS03400 PF02321 Outer membrane efflux protein MADE_RS03405 PF00293 NUDIX domain MADE_RS03415 PF00149 Calcineurin-like phosphoesterase MADE_RS03420 PF05728 Uncharacterised protein family (UPF0227) MADE_RS03425 PF01751 Toprim domain MADE_RS03425 PF00204 DNA gyrase B MADE_RS03425 PF00986 DNA gyrase B subunit, carboxyl terminus MADE_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS03435 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS03460 PF04055 Radical SAM superfamily MADE_RS03465 PF01132 Elongation factor P (EF-P) OB domain MADE_RS03465 PF08207 Elongation factor P (EF-P) KOW-like domain MADE_RS03465 PF09285 Elongation factor P, C-terminal MADE_RS03470 PF00152 tRNA synthetases class II (D, K and N) MADE_RS03475 PF00593 TonB dependent receptor MADE_RS03475 PF07715 TonB-dependent Receptor Plug Domain MADE_RS03485 PF13302 Acetyltransferase (GNAT) domain MADE_RS03490 PF07715 TonB-dependent Receptor Plug Domain MADE_RS03490 PF07660 Secretin and TonB N terminus short domain MADE_RS03490 PF00593 TonB dependent receptor MADE_RS03500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MADE_RS03505 PF05175 Methyltransferase small domain MADE_RS03515 PF01722 BolA-like protein MADE_RS03520 PF01569 PAP2 superfamily MADE_RS03530 PF03861 ANTAR domain MADE_RS03530 PF08376 Nitrate and nitrite sensing MADE_RS03545 PF00916 Sulfate permease family MADE_RS03545 PF01740 STAS domain MADE_RS03550 PF18267 Rubredoxin NAD+ reductase C-terminal domain MADE_RS03550 PF04324 BFD-like [2Fe-2S] binding domain MADE_RS03550 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS03550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MADE_RS03550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MADE_RS03560 PF00384 Molybdopterin oxidoreductase MADE_RS03560 PF01568 Molydopterin dinucleotide binding domain MADE_RS03560 PF04324 BFD-like [2Fe-2S] binding domain MADE_RS03560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MADE_RS03565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MADE_RS03565 PF14824 Sirohaem biosynthesis protein central MADE_RS03565 PF10414 Sirohaem synthase dimerisation region MADE_RS03570 PF02885 Glycosyl transferase family, helical bundle domain MADE_RS03570 PF00591 Glycosyl transferase family, a/b domain MADE_RS03575 PF13426 PAS domain MADE_RS03575 PF08447 PAS fold MADE_RS03575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS03580 PF00005 ABC transporter MADE_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS03590 PF00005 ABC transporter MADE_RS03605 PF01323 DSBA-like thioredoxin domain MADE_RS03610 PF00593 TonB dependent receptor MADE_RS03610 PF07715 TonB-dependent Receptor Plug Domain MADE_RS03620 PF12801 4Fe-4S binding domain MADE_RS03620 PF13746 4Fe-4S dicluster domain MADE_RS03620 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MADE_RS03635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS03635 PF12806 Acetyl-CoA dehydrogenase C-terminal like MADE_RS03635 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS03635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS03650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MADE_RS03650 PF13378 Enolase C-terminal domain-like MADE_RS03655 PF00596 Class II Aldolase and Adducin N-terminal domain MADE_RS03665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS03670 PF00873 AcrB/AcrD/AcrF family MADE_RS03685 PF02743 Cache domain MADE_RS03685 PF00672 HAMP domain MADE_RS03685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS03690 PF04545 Sigma-70, region 4 MADE_RS03690 PF04539 Sigma-70 region 3 MADE_RS03690 PF03979 Sigma-70 factor, region 1.1 MADE_RS03690 PF04542 Sigma-70 region 2 MADE_RS03690 PF00140 Sigma-70 factor, region 1.2 MADE_RS03690 PF04546 Sigma-70, non-essential region MADE_RS03695 PF01807 CHC2 zinc finger MADE_RS03695 PF08275 DNA primase catalytic core, N-terminal domain MADE_RS03695 PF08278 DNA primase DnaG DnaB-binding MADE_RS03695 PF10410 DnaB-helicase binding domain of primase MADE_RS03705 PF01165 Ribosomal protein S21 MADE_RS03710 PF00814 Glycoprotease family MADE_RS03720 PF02660 Glycerol-3-phosphate acyltransferase MADE_RS03725 PF02152 Dihydroneopterin aldolase MADE_RS03735 PF02673 Bacitracin resistance protein BacA MADE_RS03740 PF01230 HIT domain MADE_RS03755 PF03594 Benzoate membrane transport protein MADE_RS03760 PF01381 Helix-turn-helix MADE_RS03760 PF07883 Cupin domain MADE_RS03765 PF04381 Putative exonuclease, RdgC MADE_RS03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS03770 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS03770 PF00497 Bacterial extracellular solute-binding proteins, family 3 MADE_RS03775 PF00486 Transcriptional regulatory protein, C terminal MADE_RS03775 PF00072 Response regulator receiver domain MADE_RS03780 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS03780 PF00989 PAS fold MADE_RS03780 PF11808 Phosphate regulon sensor protein PhoR MADE_RS03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS03785 PF12849 PBP superfamily domain MADE_RS03805 PF01618 MotA/TolQ/ExbB proton channel family MADE_RS03810 PF01618 MotA/TolQ/ExbB proton channel family MADE_RS03815 PF02472 Biopolymer transport protein ExbD/TolR MADE_RS03820 PF03544 Gram-negative bacterial TonB protein C-terminal MADE_RS03830 PF00072 Response regulator receiver domain MADE_RS03835 PF00672 HAMP domain MADE_RS03835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS03835 PF01627 Hpt domain MADE_RS03835 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS03835 PF00072 Response regulator receiver domain MADE_RS03840 PF13193 AMP-binding enzyme C-terminal domain MADE_RS03840 PF00501 AMP-binding enzyme MADE_RS03850 PF07995 Glucose / Sorbosone dehydrogenase MADE_RS03855 PF00330 Aconitase family (aconitate hydratase) MADE_RS03855 PF06434 Aconitate hydratase 2 N-terminus MADE_RS03855 PF11791 Aconitate B N-terminal domain MADE_RS03860 PF01048 Phosphorylase superfamily MADE_RS03875 PF06434 Aconitate hydratase 2 N-terminus MADE_RS03875 PF00330 Aconitase family (aconitate hydratase) MADE_RS03875 PF11791 Aconitate B N-terminal domain MADE_RS03885 PF01842 ACT domain MADE_RS03885 PF00696 Amino acid kinase family MADE_RS03890 PF00672 HAMP domain MADE_RS03890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS03895 PF00149 Calcineurin-like phosphoesterase MADE_RS03900 PF04379 ApaG domain MADE_RS03905 PF00398 Ribosomal RNA adenine dimethylase MADE_RS03910 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MADE_RS03915 PF00639 PPIC-type PPIASE domain MADE_RS03915 PF09312 SurA N-terminal domain MADE_RS03920 PF04453 LPS transport system D MADE_RS03920 PF03968 OstA-like protein MADE_RS03925 PF05099 Tellurite resistance protein TerB MADE_RS03925 PF00226 DnaJ domain MADE_RS03930 PF02899 Phage integrase, N-terminal SAM-like domain MADE_RS03930 PF00589 Phage integrase family MADE_RS03935 PF13098 Thioredoxin-like domain MADE_RS03935 PF10411 Disulfide bond isomerase protein N-terminus MADE_RS03940 PF02272 DHHA1 domain MADE_RS03940 PF17768 RecJ OB domain MADE_RS03940 PF01368 DHH family MADE_RS03950 PF02565 Recombination protein O C terminal MADE_RS03950 PF11967 Recombination protein O N terminal MADE_RS03955 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MADE_RS03960 PF01648 4'-phosphopantetheinyl transferase superfamily MADE_RS03965 PF05958 tRNA (Uracil-5-)-methyltransferase MADE_RS03970 PF13291 ACT domain MADE_RS03970 PF02824 TGS domain MADE_RS03970 PF04607 Region found in RelA / SpoT proteins MADE_RS03975 PF03819 MazG nucleotide pyrophosphohydrolase domain MADE_RS04010 PF00501 AMP-binding enzyme MADE_RS04010 PF13193 AMP-binding enzyme C-terminal domain MADE_RS04020 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase MADE_RS04030 PF00535 Glycosyl transferase family 2 MADE_RS04050 PF08521 Two-component sensor kinase N-terminal MADE_RS04050 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS04055 PF00486 Transcriptional regulatory protein, C terminal MADE_RS04055 PF00072 Response regulator receiver domain MADE_RS04060 PF00572 Ribosomal protein L13 MADE_RS04065 PF00380 Ribosomal protein S9/S16 MADE_RS04070 PF00355 Rieske [2Fe-2S] domain MADE_RS04070 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MADE_RS04075 PF00033 Cytochrome b/b6/petB MADE_RS04075 PF00032 Cytochrome b(C-terminal)/b6/petD MADE_RS04080 PF02167 Cytochrome C1 family MADE_RS04085 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS04085 PF00043 Glutathione S-transferase, C-terminal domain MADE_RS04090 PF04386 Stringent starvation protein B MADE_RS04095 PF00571 CBS domain MADE_RS04095 PF03448 MgtE intracellular N domain MADE_RS04095 PF01769 Divalent cation transporter MADE_RS04100 PF00381 PTS HPr component phosphorylation site MADE_RS04105 PF03668 P-loop ATPase protein family MADE_RS04110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MADE_RS04115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MADE_RS04120 PF04963 Sigma-54 factor, core binding domain MADE_RS04120 PF00309 Sigma-54 factor, Activator interacting domain (AID) MADE_RS04120 PF04552 Sigma-54, DNA binding domain MADE_RS04125 PF12399 Branched-chain amino acid ATP-binding cassette transporter MADE_RS04125 PF00005 ABC transporter MADE_RS04130 PF03968 OstA-like protein MADE_RS04145 PF01380 SIS domain MADE_RS04145 PF00571 CBS domain MADE_RS04150 PF01699 Sodium/calcium exchanger protein MADE_RS04155 PF00005 ABC transporter MADE_RS04160 PF02405 Permease MlaE MADE_RS04165 PF02470 MlaD protein MADE_RS04170 PF05494 MlaC protein MADE_RS04180 PF01722 BolA-like protein MADE_RS04185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MADE_RS04190 PF13180 PDZ domain MADE_RS04195 PF00595 PDZ domain MADE_RS04195 PF13180 PDZ domain MADE_RS04205 PF03969 AFG1-like ATPase MADE_RS04210 PF01709 Transcriptional regulator MADE_RS04230 PF02355 Protein export membrane protein MADE_RS04230 PF07549 SecD/SecF GG Motif MADE_RS04235 PF03471 Transporter associated domain MADE_RS04235 PF00999 Sodium/hydrogen exchanger family MADE_RS04235 PF02080 TrkA-C domain MADE_RS04240 PF00593 TonB dependent receptor MADE_RS04240 PF07715 TonB-dependent Receptor Plug Domain MADE_RS04245 PF00892 EamA-like transporter family MADE_RS04255 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS04255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS04255 PF09308 LuxQ, periplasmic MADE_RS04255 PF00072 Response regulator receiver domain MADE_RS04260 PF13458 Periplasmic binding protein MADE_RS04275 PF00438 S-adenosylmethionine synthetase, N-terminal domain MADE_RS04275 PF02773 S-adenosylmethionine synthetase, C-terminal domain MADE_RS04275 PF02772 S-adenosylmethionine synthetase, central domain MADE_RS04280 PF00456 Transketolase, thiamine diphosphate binding domain MADE_RS04280 PF02780 Transketolase, C-terminal domain MADE_RS04280 PF02779 Transketolase, pyrimidine binding domain MADE_RS04285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MADE_RS04285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MADE_RS04290 PF00162 Phosphoglycerate kinase MADE_RS04295 PF00274 Fructose-bisphosphate aldolase class-I MADE_RS04305 PF07676 WD40-like Beta Propeller Repeat MADE_RS04305 PF00326 Prolyl oligopeptidase family MADE_RS04310 PF02541 Ppx/GppA phosphatase family MADE_RS04315 PF02503 Polyphosphate kinase middle domain MADE_RS04315 PF13090 Polyphosphate kinase C-terminal domain 2 MADE_RS04315 PF17941 Polyphosphate kinase C-terminal domain 1 MADE_RS04315 PF13089 Polyphosphate kinase N-terminal domain MADE_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS04335 PF00005 ABC transporter MADE_RS04340 PF01895 PhoU domain MADE_RS04345 PF01384 Phosphate transporter family MADE_RS04355 PF03466 LysR substrate binding domain MADE_RS04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS04365 PF03006 Haemolysin-III related MADE_RS04370 PF01047 MarR family MADE_RS04375 PF02566 OsmC-like protein MADE_RS04380 PF01433 Peptidase family M1 domain MADE_RS04390 PF01205 Uncharacterized protein family UPF0029 MADE_RS04390 PF09186 Domain of unknown function (DUF1949) MADE_RS04400 PF00149 Calcineurin-like phosphoesterase MADE_RS04400 PF12320 Type 5 capsule protein repressor C-terminal domain MADE_RS04405 PF13476 AAA domain MADE_RS04415 PF00375 Sodium:dicarboxylate symporter family MADE_RS04420 PF00491 Arginase family MADE_RS04425 PF01979 Amidohydrolase family MADE_RS04430 PF00392 Bacterial regulatory proteins, gntR family MADE_RS04430 PF07702 UTRA domain MADE_RS04435 PF01175 Urocanase Rossmann-like domain MADE_RS04435 PF17391 Urocanase N-terminal domain MADE_RS04435 PF17392 Urocanase C-terminal domain MADE_RS04440 PF00221 Aromatic amino acid lyase MADE_RS04465 PF12848 ABC transporter MADE_RS04465 PF00005 ABC transporter MADE_RS04485 PF00924 Mechanosensitive ion channel MADE_RS04540 PF04172 LrgB-like family MADE_RS04545 PF00072 Response regulator receiver domain MADE_RS04570 PF06969 HemN C-terminal domain MADE_RS04570 PF04055 Radical SAM superfamily MADE_RS04575 PF01725 Ham1 family MADE_RS04580 PF00270 DEAD/DEAH box helicase MADE_RS04580 PF00271 Helicase conserved C-terminal domain MADE_RS04585 PF12627 Probable RNA and SrmB- binding site of polymerase A MADE_RS04585 PF01743 Poly A polymerase head domain MADE_RS04590 PF13401 AAA domain MADE_RS04590 PF01471 Putative peptidoglycan binding domain MADE_RS04600 PF01966 HD domain MADE_RS04600 PF11871 Domain of unknown function (DUF3391) MADE_RS04605 PF00694 Aconitase C-terminal domain MADE_RS04610 PF00330 Aconitase family (aconitate hydratase) MADE_RS04615 PF00180 Isocitrate/isopropylmalate dehydrogenase MADE_RS04620 PF08502 LeuA allosteric (dimerisation) domain MADE_RS04620 PF00682 HMGL-like MADE_RS04630 PF00113 Enolase, C-terminal TIM barrel domain MADE_RS04630 PF03952 Enolase, N-terminal domain MADE_RS04635 PF06418 CTP synthase N-terminus MADE_RS04635 PF00117 Glutamine amidotransferase class-I MADE_RS04640 PF05188 MutS domain II MADE_RS04640 PF00488 MutS domain V MADE_RS04640 PF01624 MutS domain I MADE_RS04640 PF05192 MutS domain III MADE_RS04640 PF05190 MutS family domain IV MADE_RS04645 PF02464 Competence-damaged protein MADE_RS04650 PF00154 recA bacterial DNA recombination protein MADE_RS04655 PF00005 ABC transporter MADE_RS04660 PF12679 ABC-2 family transporter protein MADE_RS04675 PF00005 ABC transporter MADE_RS04680 PF03379 CcmB protein MADE_RS04685 PF01578 Cytochrome C assembly protein MADE_RS04690 PF04995 Heme exporter protein D (CcmD) MADE_RS04695 PF03100 CcmE MADE_RS04700 PF01578 Cytochrome C assembly protein MADE_RS04700 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MADE_RS04705 PF08534 Redoxin MADE_RS04710 PF03918 Cytochrome C biogenesis protein MADE_RS04720 PF04333 MlaA lipoprotein MADE_RS04725 PF16363 GDP-mannose 4,6 dehydratase MADE_RS04735 PF00854 POT family MADE_RS04745 PF00005 ABC transporter MADE_RS04755 PF10531 SLBB domain MADE_RS04755 PF02563 Polysaccharide biosynthesis/export protein MADE_RS04765 PF00953 Glycosyl transferase family 4 MADE_RS04780 PF00483 Nucleotidyl transferase MADE_RS04785 PF10531 SLBB domain MADE_RS04790 PF00180 Isocitrate/isopropylmalate dehydrogenase MADE_RS04790 PF18324 Hypothetical protein TT1725 MADE_RS04805 PF11892 Domain of unknown function (DUF3412) MADE_RS04805 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MADE_RS04805 PF03641 Possible lysine decarboxylase MADE_RS04810 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS04815 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MADE_RS04815 PF14489 QueF-like protein MADE_RS04820 PF07348 Syd protein (SUKH-2) MADE_RS04855 PF00849 RNA pseudouridylate synthase MADE_RS04860 PF00258 Flavodoxin MADE_RS04865 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS04865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MADE_RS04865 PF14602 Hexapeptide repeat of succinyl-transferase MADE_RS04875 PF00557 Metallopeptidase family M24 MADE_RS04885 PF00889 Elongation factor TS MADE_RS04890 PF00696 Amino acid kinase family MADE_RS04895 PF01765 Ribosome recycling factor MADE_RS04900 PF01255 Putative undecaprenyl diphosphate synthase MADE_RS04910 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MADE_RS04910 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MADE_RS04910 PF13288 DXP reductoisomerase C-terminal domain MADE_RS04915 PF02163 Peptidase family M50 MADE_RS04915 PF17820 PDZ domain MADE_RS04920 PF01103 Surface antigen MADE_RS04920 PF07244 Surface antigen variable number repeat MADE_RS04925 PF03938 Outer membrane protein (OmpH-like) MADE_RS04930 PF07977 FabA-like domain MADE_RS04935 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MADE_RS04935 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS04940 PF02684 Lipid-A-disaccharide synthetase MADE_RS04945 PF01351 Ribonuclease HII MADE_RS04950 PF14579 Helix-hairpin-helix motif MADE_RS04950 PF02811 PHP domain MADE_RS04950 PF01336 OB-fold nucleic acid binding domain MADE_RS04950 PF07733 Bacterial DNA polymerase III alpha NTPase domain MADE_RS04950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MADE_RS04955 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MADE_RS04960 PF11734 TilS substrate C-terminal domain MADE_RS04960 PF09179 TilS substrate binding domain MADE_RS04960 PF01171 PP-loop family MADE_RS04965 PF03707 Bacterial signalling protein N terminal repeat MADE_RS04965 PF00563 EAL domain MADE_RS04965 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS04970 PF02254 TrkA-N domain MADE_RS04970 PF00999 Sodium/hydrogen exchanger family MADE_RS04970 PF02080 TrkA-C domain MADE_RS04980 PF14437 MafB19-like deaminase MADE_RS04985 PF01464 Transglycosylase SLT domain MADE_RS04985 PF00497 Bacterial extracellular solute-binding proteins, family 3 MADE_RS04990 PF02769 AIR synthase related protein, C-terminal domain MADE_RS04990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MADE_RS04990 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MADE_RS04995 PF01713 Smr domain MADE_RS05020 PF00664 ABC transporter transmembrane region MADE_RS05020 PF00005 ABC transporter MADE_RS05025 PF01526 Tn3 transposase DDE domain MADE_RS05025 PF13700 Domain of unknown function (DUF4158) MADE_RS05035 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS05035 PF00403 Heavy-metal-associated domain MADE_RS05035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS05040 PF03203 MerC mercury resistance protein MADE_RS05045 PF00403 Heavy-metal-associated domain MADE_RS05050 PF02411 MerT mercuric transport protein MADE_RS05055 PF13411 MerR HTH family regulatory protein MADE_RS05060 PF00239 Resolvase, N terminal domain MADE_RS05060 PF02796 Helix-turn-helix domain of resolvase MADE_RS05100 PF03243 Alkylmercury lyase MADE_RS05100 PF12324 Helix-turn-helix domain of alkylmercury lyase MADE_RS05105 PF02411 MerT mercuric transport protein MADE_RS05110 PF00403 Heavy-metal-associated domain MADE_RS05115 PF02411 MerT mercuric transport protein MADE_RS05120 PF01502 Phosphoribosyl-AMP cyclohydrolase MADE_RS05125 PF09278 MerR, DNA binding MADE_RS05125 PF00376 MerR family regulatory protein MADE_RS05150 PF09278 MerR, DNA binding MADE_RS05150 PF00376 MerR family regulatory protein MADE_RS05155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS05155 PF00403 Heavy-metal-associated domain MADE_RS05160 PF03243 Alkylmercury lyase MADE_RS05160 PF12324 Helix-turn-helix domain of alkylmercury lyase MADE_RS05170 PF05052 MerE protein MADE_RS05190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MADE_RS05190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MADE_RS05200 PF13700 Domain of unknown function (DUF4158) MADE_RS05200 PF01526 Tn3 transposase DDE domain MADE_RS05205 PF11799 impB/mucB/samB family C-terminal domain MADE_RS05205 PF00817 impB/mucB/samB family MADE_RS05205 PF13438 Domain of unknown function (DUF4113) MADE_RS05210 PF00529 HlyD membrane-fusion protein of T1SS MADE_RS05210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS05215 PF00196 Bacterial regulatory proteins, luxR family MADE_RS05215 PF00072 Response regulator receiver domain MADE_RS05250 PF00072 Response regulator receiver domain MADE_RS05250 PF01584 CheW-like domain MADE_RS05255 PF03705 CheR methyltransferase, all-alpha domain MADE_RS05255 PF01739 CheR methyltransferase, SAM binding domain MADE_RS05260 PF00460 Flagella basal body rod protein MADE_RS05265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MADE_RS05265 PF00460 Flagella basal body rod protein MADE_RS05270 PF03963 Flagellar hook capping protein - N-terminal region MADE_RS05270 PF13860 FlgD Ig-like domain MADE_RS05270 PF13861 FlgD Tudor-like domain MADE_RS05275 PF07559 Flagellar basal body protein FlaE MADE_RS05275 PF00460 Flagella basal body rod protein MADE_RS05275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MADE_RS05280 PF00460 Flagella basal body rod protein MADE_RS05280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MADE_RS05285 PF00460 Flagella basal body rod protein MADE_RS05285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MADE_RS05290 PF02107 Flagellar L-ring protein MADE_RS05295 PF02119 Flagellar P-ring protein MADE_RS05300 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MADE_RS05300 PF10135 Rod binding protein MADE_RS05310 PF00669 Bacterial flagellin N-terminal helical region MADE_RS05315 PF00700 Bacterial flagellin C-terminal helical region MADE_RS05315 PF07196 Flagellin hook IN motif MADE_RS05315 PF00669 Bacterial flagellin N-terminal helical region MADE_RS05325 PF00669 Bacterial flagellin N-terminal helical region MADE_RS05325 PF00700 Bacterial flagellin C-terminal helical region MADE_RS05325 PF07196 Flagellin hook IN motif MADE_RS05335 PF07196 Flagellin hook IN motif MADE_RS05335 PF02465 Flagellar hook-associated protein 2 N-terminus MADE_RS05335 PF07195 Flagellar hook-associated protein 2 C-terminus MADE_RS05340 PF02561 Flagellar protein FliS MADE_RS05355 PF02585 GlcNAc-PI de-N-acetylase MADE_RS05370 PF08666 SAF domain MADE_RS05370 PF03102 NeuB family MADE_RS05375 PF02371 Transposase IS116/IS110/IS902 family MADE_RS05375 PF01548 Transposase MADE_RS05405 PF02348 Cytidylyltransferase MADE_RS05410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MADE_RS05415 PF02719 Polysaccharide biosynthesis protein MADE_RS05420 PF12445 Flagellin protein MADE_RS05420 PF00700 Bacterial flagellin C-terminal helical region MADE_RS05420 PF00669 Bacterial flagellin N-terminal helical region MADE_RS05425 PF06490 Flagellar regulatory protein FleQ MADE_RS05425 PF02954 Bacterial regulatory protein, Fis family MADE_RS05425 PF00158 Sigma-54 interaction domain MADE_RS05430 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS05430 PF13188 PAS domain MADE_RS05435 PF00072 Response regulator receiver domain MADE_RS05435 PF00158 Sigma-54 interaction domain MADE_RS05435 PF02954 Bacterial regulatory protein, Fis family MADE_RS05440 PF02049 Flagellar hook-basal body complex protein FliE MADE_RS05445 PF08345 Flagellar M-ring protein C-terminal MADE_RS05445 PF01514 Secretory protein of YscJ/FliF family MADE_RS05450 PF14841 FliG middle domain MADE_RS05450 PF01706 FliG C-terminal domain MADE_RS05450 PF14842 FliG N-terminal domain MADE_RS05460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MADE_RS05460 PF18269 T3SS EscN ATPase C-terminal domain MADE_RS05480 PF02154 Flagellar motor switch protein FliM MADE_RS05480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MADE_RS05485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MADE_RS05490 PF04347 Flagellar biosynthesis protein, FliO MADE_RS05495 PF00813 FliP family MADE_RS05500 PF01313 Bacterial export proteins, family 3 MADE_RS05505 PF01311 Bacterial export proteins, family 1 MADE_RS05510 PF01312 FlhB HrpN YscU SpaS Family MADE_RS05515 PF00771 FHIPEP family MADE_RS05520 PF00448 SRP54-type protein, GTPase domain MADE_RS05525 PF10609 NUBPL iron-transfer P-loop NTPase MADE_RS05530 PF04545 Sigma-70, region 4 MADE_RS05530 PF04542 Sigma-70 region 2 MADE_RS05530 PF04539 Sigma-70 region 3 MADE_RS05535 PF00072 Response regulator receiver domain MADE_RS05540 PF04344 Chemotaxis phosphatase, CheZ MADE_RS05545 PF02895 Signal transducing histidine kinase, homodimeric domain MADE_RS05545 PF01584 CheW-like domain MADE_RS05545 PF00072 Response regulator receiver domain MADE_RS05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS05545 PF01627 Hpt domain MADE_RS05550 PF01339 CheB methylesterase MADE_RS05550 PF00072 Response regulator receiver domain MADE_RS05555 PF13614 AAA domain MADE_RS05565 PF01584 CheW-like domain MADE_RS05575 PF04204 Homoserine O-succinyltransferase MADE_RS05580 PF02310 B12 binding domain MADE_RS05580 PF02607 B12 binding domain MADE_RS05580 PF02965 Vitamin B12 dependent methionine synthase, activation domain MADE_RS05580 PF00809 Pterin binding enzyme MADE_RS05580 PF02574 Homocysteine S-methyltransferase MADE_RS05585 PF02965 Vitamin B12 dependent methionine synthase, activation domain MADE_RS05585 PF02607 B12 binding domain MADE_RS05585 PF02574 Homocysteine S-methyltransferase MADE_RS05585 PF02310 B12 binding domain MADE_RS05585 PF00809 Pterin binding enzyme MADE_RS05595 PF06865 Pyrimidine/purine nucleoside phosphorylase MADE_RS05600 PF03466 LysR substrate binding domain MADE_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS05605 PF03466 LysR substrate binding domain MADE_RS05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS05610 PF00484 Carbonic anhydrase MADE_RS05615 PF00916 Sulfate permease family MADE_RS05615 PF01740 STAS domain MADE_RS05625 PF13977 BetI-type transcriptional repressor, C-terminal MADE_RS05625 PF00440 Bacterial regulatory proteins, tetR family MADE_RS05630 PF01431 Peptidase family M13 MADE_RS05630 PF05649 Peptidase family M13 MADE_RS05640 PF02631 RecX family MADE_RS05645 PF01411 tRNA synthetases class II (A) MADE_RS05645 PF02272 DHHA1 domain MADE_RS05645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MADE_RS05650 PF02599 Global regulator protein family MADE_RS05670 PF02436 Conserved carboxylase domain MADE_RS05670 PF00364 Biotin-requiring enzyme MADE_RS05670 PF00682 HMGL-like MADE_RS05675 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit MADE_RS05680 PF00005 ABC transporter MADE_RS05685 PF00005 ABC transporter MADE_RS05685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MADE_RS05690 PF12911 N-terminal TM domain of oligopeptide transport permease C MADE_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS05695 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS05700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MADE_RS05705 PF00158 Sigma-54 interaction domain MADE_RS05705 PF02954 Bacterial regulatory protein, Fis family MADE_RS05710 PF04012 PspA/IM30 family MADE_RS05725 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MADE_RS05730 PF00158 Sigma-54 interaction domain MADE_RS05730 PF18024 Helix-turn-helix domain MADE_RS05740 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS05740 PF14497 Glutathione S-transferase, C-terminal domain MADE_RS05745 PF01037 Lrp/AsnC ligand binding domain MADE_RS05750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MADE_RS05750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MADE_RS05760 PF03301 Tryptophan 2,3-dioxygenase MADE_RS05770 PF00593 TonB dependent receptor MADE_RS05770 PF07715 TonB-dependent Receptor Plug Domain MADE_RS05805 PF01618 MotA/TolQ/ExbB proton channel family MADE_RS05810 PF01618 MotA/TolQ/ExbB proton channel family MADE_RS05815 PF02472 Biopolymer transport protein ExbD/TolR MADE_RS05820 PF03544 Gram-negative bacterial TonB protein C-terminal MADE_RS05835 PF13718 GNAT acetyltransferase 2 MADE_RS05835 PF17176 tRNA-binding domain MADE_RS05835 PF05127 Helicase MADE_RS05835 PF08351 Domain of unknown function (DUF1726) MADE_RS05860 PF01636 Phosphotransferase enzyme family MADE_RS05875 PF00583 Acetyltransferase (GNAT) family MADE_RS05890 PF03466 LysR substrate binding domain MADE_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS05900 PF00296 Luciferase-like monooxygenase MADE_RS05905 PF00248 Aldo/keto reductase family MADE_RS05920 PF13533 Biotin-lipoyl like MADE_RS05925 PF01047 MarR family MADE_RS05930 PF03144 Elongation factor Tu domain 2 MADE_RS05930 PF00009 Elongation factor Tu GTP binding domain MADE_RS05930 PF16658 Class II release factor RF3, C-terminal domain MADE_RS05935 PF00750 tRNA synthetases class I (R) MADE_RS05935 PF05746 DALR anticodon binding domain MADE_RS05935 PF03485 Arginyl tRNA synthetase N terminal domain MADE_RS05940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MADE_RS05960 PF00291 Pyridoxal-phosphate dependent enzyme MADE_RS05970 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS05975 PF04224 Protein of unknown function, DUF417 MADE_RS05990 PF00487 Fatty acid desaturase MADE_RS05995 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS05995 PF00970 Oxidoreductase FAD-binding domain MADE_RS05995 PF00175 Oxidoreductase NAD-binding domain MADE_RS06010 PF00152 tRNA synthetases class II (D, K and N) MADE_RS06010 PF01336 OB-fold nucleic acid binding domain MADE_RS06015 PF08546 Ketopantoate reductase PanE/ApbA C terminal MADE_RS06015 PF02558 Ketopantoate reductase PanE/ApbA MADE_RS06020 PF00849 RNA pseudouridylate synthase MADE_RS06030 PF05193 Peptidase M16 inactive domain MADE_RS06030 PF00675 Insulinase (Peptidase family M16) MADE_RS06035 PF04262 Glutamate-cysteine ligase MADE_RS06055 PF01713 Smr domain MADE_RS06060 PF05175 Methyltransferase small domain MADE_RS06065 PF01264 Chorismate synthase MADE_RS06075 PF04293 SpoVR like protein MADE_RS06080 PF04285 Protein of unknown function (DUF444) MADE_RS06085 PF08298 PrkA AAA domain MADE_RS06085 PF06798 PrkA serine protein kinase C-terminal domain MADE_RS06090 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MADE_RS06090 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MADE_RS06095 PF00462 Glutaredoxin MADE_RS06100 PF07715 TonB-dependent Receptor Plug Domain MADE_RS06100 PF00593 TonB dependent receptor MADE_RS06115 PF07715 TonB-dependent Receptor Plug Domain MADE_RS06115 PF00593 TonB dependent receptor MADE_RS06120 PF04324 BFD-like [2Fe-2S] binding domain MADE_RS06125 PF10417 C-terminal domain of 1-Cys peroxiredoxin MADE_RS06125 PF00578 AhpC/TSA family MADE_RS06130 PF00929 Exonuclease MADE_RS06135 PF00691 OmpA family MADE_RS06135 PF18393 MotY N-terminal domain MADE_RS06140 PF03009 Glycerophosphoryl diester phosphodiesterase family MADE_RS06145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MADE_RS06150 PF00313 'Cold-shock' DNA-binding domain MADE_RS06160 PF04389 Peptidase family M28 MADE_RS06160 PF02225 PA domain MADE_RS06165 PF00730 HhH-GPD superfamily base excision DNA repair protein MADE_RS06165 PF00633 Helix-hairpin-helix motif MADE_RS06170 PF02508 Rnf-Nqr subunit, membrane protein MADE_RS06175 PF04205 FMN-binding domain MADE_RS06180 PF03116 NQR2, RnfD, RnfE family MADE_RS06185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MADE_RS06185 PF12838 4Fe-4S dicluster domain MADE_RS06185 PF10531 SLBB domain MADE_RS06185 PF13375 RnfC Barrel sandwich hybrid domain MADE_RS06190 PF04060 Putative Fe-S cluster MADE_RS06195 PF02508 Rnf-Nqr subunit, membrane protein MADE_RS06210 PF01554 MatE MADE_RS06215 PF02151 UvrB/uvrC motif MADE_RS06215 PF12344 Ultra-violet resistance protein B MADE_RS06215 PF17757 UvrB interaction domain MADE_RS06215 PF00271 Helicase conserved C-terminal domain MADE_RS06215 PF04851 Type III restriction enzyme, res subunit MADE_RS06225 PF06508 Queuosine biosynthesis protein QueC MADE_RS06230 PF04055 Radical SAM superfamily MADE_RS06240 PF00733 Asparagine synthase MADE_RS06240 PF13537 Glutamine amidotransferase domain MADE_RS06265 PF03600 Citrate transporter MADE_RS06265 PF02080 TrkA-C domain MADE_RS06270 PF00009 Elongation factor Tu GTP binding domain MADE_RS06275 PF00459 Inositol monophosphatase family MADE_RS06285 PF01507 Phosphoadenosine phosphosulfate reductase family MADE_RS06290 PF00474 Sodium:solute symporter family MADE_RS06295 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS06305 PF08281 Sigma-70, region 4 MADE_RS06305 PF04542 Sigma-70 region 2 MADE_RS06320 PF13519 von Willebrand factor type A domain MADE_RS06320 PF07584 Aerotolerance regulator N-terminal MADE_RS06325 PF00092 von Willebrand factor type A domain MADE_RS06335 PF01882 Protein of unknown function DUF58 MADE_RS06340 PF07726 ATPase family associated with various cellular activities (AAA) MADE_RS06340 PF17863 AAA lid domain MADE_RS06345 PF00108 Thiolase, N-terminal domain MADE_RS06345 PF02803 Thiolase, C-terminal domain MADE_RS06350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MADE_RS06350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MADE_RS06350 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS06360 PF00563 EAL domain MADE_RS06360 PF03707 Bacterial signalling protein N terminal repeat MADE_RS06360 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS06365 PF00675 Insulinase (Peptidase family M16) MADE_RS06365 PF05193 Peptidase M16 inactive domain MADE_RS06370 PF00300 Histidine phosphatase superfamily (branch 1) MADE_RS06385 PF01578 Cytochrome C assembly protein MADE_RS06390 PF02978 Signal peptide binding domain MADE_RS06390 PF02881 SRP54-type protein, helical bundle domain MADE_RS06390 PF00448 SRP54-type protein, GTPase domain MADE_RS06430 PF00873 AcrB/AcrD/AcrF family MADE_RS06435 PF13533 Biotin-lipoyl like MADE_RS06440 PF00664 ABC transporter transmembrane region MADE_RS06440 PF00005 ABC transporter MADE_RS06455 PF00886 Ribosomal protein S16 MADE_RS06460 PF05239 PRC-barrel domain MADE_RS06460 PF01782 RimM N-terminal domain MADE_RS06465 PF01746 tRNA (Guanine-1)-methyltransferase MADE_RS06470 PF01245 Ribosomal protein L19 MADE_RS06475 PF03458 UPF0126 domain MADE_RS06480 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS06485 PF00793 DAHP synthetase I family MADE_RS06490 PF01817 Chorismate mutase type II MADE_RS06490 PF02153 Prephenate dehydrogenase MADE_RS06495 PF00800 Prephenate dehydratase MADE_RS06495 PF01817 Chorismate mutase type II MADE_RS06505 PF01253 Translation initiation factor SUI1 MADE_RS06515 PF00486 Transcriptional regulatory protein, C terminal MADE_RS06515 PF00072 Response regulator receiver domain MADE_RS06525 PF03707 Bacterial signalling protein N terminal repeat MADE_RS06525 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS06525 PF00563 EAL domain MADE_RS06535 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS06545 PF00072 Response regulator receiver domain MADE_RS06545 PF00158 Sigma-54 interaction domain MADE_RS06565 PF00152 tRNA synthetases class II (D, K and N) MADE_RS06565 PF01336 OB-fold nucleic acid binding domain MADE_RS06565 PF02938 GAD domain MADE_RS06570 PF00293 NUDIX domain MADE_RS06575 PF02075 Crossover junction endodeoxyribonuclease RuvC MADE_RS06580 PF07499 RuvA, C-terminal domain MADE_RS06580 PF01330 RuvA N terminal domain MADE_RS06585 PF05491 RuvB C-terminal winged helix domain MADE_RS06585 PF17864 RuvB AAA lid domain MADE_RS06585 PF05496 Holliday junction DNA helicase RuvB P-loop domain MADE_RS06590 PF03061 Thioesterase superfamily MADE_RS06595 PF01618 MotA/TolQ/ExbB proton channel family MADE_RS06600 PF02472 Biopolymer transport protein ExbD/TolR MADE_RS06610 PF04052 TolB amino-terminal domain MADE_RS06610 PF07676 WD40-like Beta Propeller Repeat MADE_RS06615 PF00691 OmpA family MADE_RS06625 PF02445 Quinolinate synthetase A protein MADE_RS06640 PF01734 Patatin-like phospholipase MADE_RS06645 PF02558 Ketopantoate reductase PanE/ApbA MADE_RS06645 PF08546 Ketopantoate reductase PanE/ApbA C terminal MADE_RS06655 PF00072 Response regulator receiver domain MADE_RS06655 PF09308 LuxQ, periplasmic MADE_RS06655 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS06665 PF01118 Semialdehyde dehydrogenase, NAD binding domain MADE_RS06665 PF02774 Semialdehyde dehydrogenase, dimerisation domain MADE_RS06670 PF00106 short chain dehydrogenase MADE_RS06675 PF01292 Prokaryotic cytochrome b561 MADE_RS06680 PF00563 EAL domain MADE_RS06680 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS06680 PF03707 Bacterial signalling protein N terminal repeat MADE_RS06700 PF01863 Protein of unknown function DUF45 MADE_RS06710 PF00873 AcrB/AcrD/AcrF family MADE_RS06720 PF08361 MAATS-type transcriptional repressor, C-terminal region MADE_RS06720 PF00440 Bacterial regulatory proteins, tetR family MADE_RS06725 PF07715 TonB-dependent Receptor Plug Domain MADE_RS06725 PF00593 TonB dependent receptor MADE_RS06735 PF00873 AcrB/AcrD/AcrF family MADE_RS06745 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS06755 PF02470 MlaD protein MADE_RS06760 PF04403 Paraquat-inducible protein A MADE_RS06775 PF01336 OB-fold nucleic acid binding domain MADE_RS06775 PF00152 tRNA synthetases class II (D, K and N) MADE_RS06790 PF08443 RimK-like ATP-grasp domain MADE_RS06790 PF18030 RimK PreATP-grasp domain MADE_RS06810 PF00202 Aminotransferase class-III MADE_RS06815 PF06968 Biotin and Thiamin Synthesis associated domain MADE_RS06815 PF04055 Radical SAM superfamily MADE_RS06820 PF00155 Aminotransferase class I and II MADE_RS06835 PF03575 Peptidase family S51 MADE_RS06840 PF01451 Low molecular weight phosphotyrosine protein phosphatase MADE_RS06845 PF01032 FecCD transport family MADE_RS06850 PF00005 ABC transporter MADE_RS06855 PF01474 Class-II DAHP synthetase family MADE_RS06870 PF00005 ABC transporter MADE_RS06870 PF00664 ABC transporter transmembrane region MADE_RS06875 PF06463 Molybdenum Cofactor Synthesis C MADE_RS06875 PF04055 Radical SAM superfamily MADE_RS06885 PF00486 Transcriptional regulatory protein, C terminal MADE_RS06885 PF00072 Response regulator receiver domain MADE_RS06945 PF01207 Dihydrouridine synthase (Dus) MADE_RS06960 PF13472 GDSL-like Lipase/Acylhydrolase family MADE_RS06965 PF00005 ABC transporter MADE_RS06975 PF08338 Domain of unknown function (DUF1731) MADE_RS06975 PF01370 NAD dependent epimerase/dehydratase family MADE_RS06980 PF02152 Dihydroneopterin aldolase MADE_RS06985 PF01594 AI-2E family transporter MADE_RS06990 PF08918 PhoQ Sensor MADE_RS06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS06995 PF00486 Transcriptional regulatory protein, C terminal MADE_RS06995 PF00072 Response regulator receiver domain MADE_RS07010 PF03795 YCII-related domain MADE_RS07015 PF00290 Tryptophan synthase alpha chain MADE_RS07020 PF00291 Pyridoxal-phosphate dependent enzyme MADE_RS07025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MADE_RS07025 PF00218 Indole-3-glycerol phosphate synthase MADE_RS07030 PF02885 Glycosyl transferase family, helical bundle domain MADE_RS07030 PF00591 Glycosyl transferase family, a/b domain MADE_RS07035 PF00117 Glutamine amidotransferase class-I MADE_RS07040 PF00425 chorismate binding enzyme MADE_RS07040 PF04715 Anthranilate synthase component I, N terminal region MADE_RS07045 PF02811 PHP domain MADE_RS07050 PF01300 Telomere recombination MADE_RS07055 PF02616 Segregation and condensation protein ScpA MADE_RS07060 PF04079 Segregation and condensation complex subunit ScpB MADE_RS07065 PF01479 S4 domain MADE_RS07065 PF00849 RNA pseudouridylate synthase MADE_RS07070 PF00248 Aldo/keto reductase family MADE_RS07075 PF14602 Hexapeptide repeat of succinyl-transferase MADE_RS07075 PF12464 Maltose acetyltransferase MADE_RS07085 PF04286 Protein of unknown function (DUF445) MADE_RS07100 PF00664 ABC transporter transmembrane region MADE_RS07100 PF00005 ABC transporter MADE_RS07105 PF00529 HlyD membrane-fusion protein of T1SS MADE_RS07105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS07110 PF05724 Thiopurine S-methyltransferase (TPMT) MADE_RS07115 PF04355 SmpA / OmlA family MADE_RS07120 PF02463 RecF/RecN/SMC N terminal domain MADE_RS07125 PF00210 Ferritin-like domain MADE_RS07130 PF01513 ATP-NAD kinase MADE_RS07135 PF00465 Iron-containing alcohol dehydrogenase MADE_RS07150 PF00561 alpha/beta hydrolase fold MADE_RS07160 PF00593 TonB dependent receptor MADE_RS07160 PF07715 TonB-dependent Receptor Plug Domain MADE_RS07165 PF00196 Bacterial regulatory proteins, luxR family MADE_RS07165 PF00072 Response regulator receiver domain MADE_RS07185 PF00989 PAS fold MADE_RS07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS07185 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS07190 PF01025 GrpE MADE_RS07195 PF00012 Hsp70 protein MADE_RS07200 PF00684 DnaJ central domain MADE_RS07200 PF01556 DnaJ C terminal domain MADE_RS07200 PF00226 DnaJ domain MADE_RS07205 PF01322 Cytochrome C' MADE_RS07210 PF12792 CSS motif domain associated with EAL MADE_RS07210 PF00563 EAL domain MADE_RS07215 PF16177 Acetyl-coenzyme A synthetase N-terminus MADE_RS07215 PF00501 AMP-binding enzyme MADE_RS07215 PF13193 AMP-binding enzyme C-terminal domain MADE_RS07225 PF05173 Dihydrodipicolinate reductase, C-terminus MADE_RS07225 PF01113 Dihydrodipicolinate reductase, N-terminus MADE_RS07230 PF00117 Glutamine amidotransferase class-I MADE_RS07230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MADE_RS07235 PF02142 MGS-like domain MADE_RS07235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MADE_RS07235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MADE_RS07240 PF03449 Transcription elongation factor, N-terminal MADE_RS07240 PF01272 Transcription elongation factor, GreA/GreB, C-term MADE_RS07255 PF00011 Hsp20/alpha crystallin family MADE_RS07260 PF00871 Acetokinase family MADE_RS07265 PF01515 Phosphate acetyl/butaryl transferase MADE_RS07265 PF07085 DRTGG domain MADE_RS07280 PF00795 Carbon-nitrogen hydrolase MADE_RS07285 PF03471 Transporter associated domain MADE_RS07285 PF00571 CBS domain MADE_RS07290 PF02130 Uncharacterized protein family UPF0054 MADE_RS07295 PF02562 PhoH-like protein MADE_RS07300 PF04055 Radical SAM superfamily MADE_RS07300 PF01938 TRAM domain MADE_RS07300 PF00919 Uncharacterized protein family UPF0004 MADE_RS07305 PF01494 FAD binding domain MADE_RS07330 PF07715 TonB-dependent Receptor Plug Domain MADE_RS07330 PF00593 TonB dependent receptor MADE_RS07335 PF03061 Thioesterase superfamily MADE_RS07340 PF01613 Flavin reductase like domain MADE_RS07350 PF01235 Sodium:alanine symporter family MADE_RS07395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MADE_RS07400 PF06071 Protein of unknown function (DUF933) MADE_RS07400 PF01926 50S ribosome-binding GTPase MADE_RS07405 PF01195 Peptidyl-tRNA hydrolase MADE_RS07410 PF14693 Ribosomal protein TL5, C-terminal domain MADE_RS07410 PF01386 Ribosomal L25p family MADE_RS07415 PF00107 Zinc-binding dehydrogenase MADE_RS07415 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS07430 PF14572 Phosphoribosyl synthetase-associated domain MADE_RS07430 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MADE_RS07440 PF00288 GHMP kinases N terminal domain MADE_RS07440 PF08544 GHMP kinases C terminal MADE_RS07445 PF03550 Outer membrane lipoprotein LolB MADE_RS07450 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MADE_RS07450 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MADE_RS07450 PF01488 Shikimate / quinate 5-dehydrogenase MADE_RS07455 PF03462 PCRF domain MADE_RS07455 PF00472 RF-1 domain MADE_RS07460 PF17827 PrmC N-terminal domain MADE_RS07460 PF13847 Methyltransferase domain MADE_RS07465 PF11849 Domain of unknown function (DUF3369) MADE_RS07470 PF04247 Invasion gene expression up-regulator, SirB MADE_RS07475 PF00793 DAHP synthetase I family MADE_RS07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS07485 PF03466 LysR substrate binding domain MADE_RS07495 PF04241 Protein of unknown function (DUF423) MADE_RS07500 PF01728 FtsJ-like methyltransferase MADE_RS07500 PF18125 RlmM ferredoxin-like domain MADE_RS07505 PF03764 Elongation factor G, domain IV MADE_RS07505 PF14492 Elongation Factor G, domain II MADE_RS07505 PF00679 Elongation factor G C-terminus MADE_RS07505 PF03144 Elongation factor Tu domain 2 MADE_RS07505 PF00009 Elongation factor Tu GTP binding domain MADE_RS07510 PF02560 Cyanate lyase C-terminal domain MADE_RS07515 PF02560 Cyanate lyase C-terminal domain MADE_RS07520 PF00069 Protein kinase domain MADE_RS07525 PF01226 Formate/nitrite transporter MADE_RS07530 PF11992 Domain of unknown function (DUF3488) MADE_RS07530 PF13559 Domain of unknown function (DUF4129) MADE_RS07530 PF01841 Transglutaminase-like superfamily MADE_RS07540 PF17863 AAA lid domain MADE_RS07540 PF07726 ATPase family associated with various cellular activities (AAA) MADE_RS07545 PF03925 SeqA protein C-terminal domain MADE_RS07545 PF17206 SeqA protein N-terminal domain MADE_RS07550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MADE_RS07550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MADE_RS07550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MADE_RS07550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MADE_RS07555 PF00343 Carbohydrate phosphorylase MADE_RS07560 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07560 PF03707 Bacterial signalling protein N terminal repeat MADE_RS07560 PF00563 EAL domain MADE_RS07565 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MADE_RS07575 PF01906 Putative heavy-metal-binding MADE_RS07580 PF00375 Sodium:dicarboxylate symporter family MADE_RS07595 PF01546 Peptidase family M20/M25/M40 MADE_RS07595 PF07687 Peptidase dimerisation domain MADE_RS07600 PF03960 ArsC family MADE_RS07605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MADE_RS07620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MADE_RS07625 PF04209 homogentisate 1,2-dioxygenase MADE_RS07645 PF12327 FtsZ family, C-terminal domain MADE_RS07645 PF00091 Tubulin/FtsZ family, GTPase domain MADE_RS07655 PF00563 EAL domain MADE_RS07655 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07655 PF03707 Bacterial signalling protein N terminal repeat MADE_RS07665 PF03707 Bacterial signalling protein N terminal repeat MADE_RS07665 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07665 PF00563 EAL domain MADE_RS07670 PF00873 AcrB/AcrD/AcrF family MADE_RS07680 PF02254 TrkA-N domain MADE_RS07680 PF00999 Sodium/hydrogen exchanger family MADE_RS07685 PF02525 Flavodoxin-like fold MADE_RS07695 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MADE_RS07700 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS07700 PF01799 [2Fe-2S] binding domain MADE_RS07705 PF01638 HxlR-like helix-turn-helix MADE_RS07710 PF05231 MASE1 MADE_RS07710 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07710 PF00563 EAL domain MADE_RS07710 PF08447 PAS fold MADE_RS07710 PF13426 PAS domain MADE_RS07710 PF08448 PAS fold MADE_RS07720 PF01979 Amidohydrolase family MADE_RS07725 PF00576 HIUase/Transthyretin family MADE_RS07740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MADE_RS07740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MADE_RS07745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MADE_RS07745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MADE_RS07745 PF01799 [2Fe-2S] binding domain MADE_RS07745 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS07755 PF00440 Bacterial regulatory proteins, tetR family MADE_RS07755 PF08362 YcdC-like protein, C-terminal region MADE_RS07770 PF00860 Permease family MADE_RS07775 PF00962 Adenosine/AMP deaminase MADE_RS07785 PF00072 Response regulator receiver domain MADE_RS07790 PF01590 GAF domain MADE_RS07790 PF00563 EAL domain MADE_RS07790 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07790 PF00360 Phytochrome region MADE_RS07795 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07795 PF00072 Response regulator receiver domain MADE_RS07800 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS07800 PF09308 LuxQ, periplasmic MADE_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS07800 PF00072 Response regulator receiver domain MADE_RS07805 PF07715 TonB-dependent Receptor Plug Domain MADE_RS07805 PF00593 TonB dependent receptor MADE_RS07810 PF00860 Permease family MADE_RS07820 PF01546 Peptidase family M20/M25/M40 MADE_RS07820 PF07687 Peptidase dimerisation domain MADE_RS07825 PF00266 Aminotransferase class-V MADE_RS07830 PF01925 Sulfite exporter TauE/SafE MADE_RS07840 PF01425 Amidase MADE_RS07875 PF03881 Fructosamine kinase MADE_RS07880 PF03129 Anticodon binding domain MADE_RS07880 PF02824 TGS domain MADE_RS07880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MADE_RS07880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MADE_RS07885 PF00707 Translation initiation factor IF-3, C-terminal domain MADE_RS07885 PF05198 Translation initiation factor IF-3, N-terminal domain MADE_RS07890 PF01632 Ribosomal protein L35 MADE_RS07895 PF00453 Ribosomal protein L20 MADE_RS07900 PF00483 Nucleotidyl transferase MADE_RS07900 PF01050 Mannose-6-phosphate isomerase MADE_RS07905 PF02397 Bacterial sugar transferase MADE_RS07915 PF10531 SLBB domain MADE_RS07915 PF02563 Polysaccharide biosynthesis/export protein MADE_RS07915 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MADE_RS07920 PF13614 AAA domain MADE_RS07950 PF03707 Bacterial signalling protein N terminal repeat MADE_RS07950 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS07950 PF00563 EAL domain MADE_RS07970 PF00534 Glycosyl transferases group 1 MADE_RS07970 PF13477 Glycosyl transferase 4-like MADE_RS07975 PF00535 Glycosyl transferase family 2 MADE_RS07980 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MADE_RS07980 PF00535 Glycosyl transferase family 2 MADE_RS07985 PF01943 Polysaccharide biosynthesis protein MADE_RS07990 PF13439 Glycosyltransferase Family 4 MADE_RS07990 PF00534 Glycosyl transferases group 1 MADE_RS08010 PF00534 Glycosyl transferases group 1 MADE_RS08010 PF13579 Glycosyl transferase 4-like domain MADE_RS08015 PF01695 IstB-like ATP binding protein MADE_RS08020 PF00665 Integrase core domain MADE_RS08025 PF00535 Glycosyl transferase family 2 MADE_RS08035 PF01609 Transposase DDE domain MADE_RS08035 PF05598 Transposase domain (DUF772) MADE_RS08040 PF01757 Acyltransferase family MADE_RS08060 PF13439 Glycosyltransferase Family 4 MADE_RS08060 PF00534 Glycosyl transferases group 1 MADE_RS08070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MADE_RS08070 PF01409 tRNA synthetases class II core domain (F) MADE_RS08075 PF01588 Putative tRNA binding domain MADE_RS08075 PF03483 B3/4 domain MADE_RS08075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MADE_RS08075 PF03147 Ferredoxin-fold anticodon binding domain MADE_RS08075 PF03484 tRNA synthetase B5 domain MADE_RS08080 PF00216 Bacterial DNA-binding protein MADE_RS08090 PF04073 Aminoacyl-tRNA editing domain MADE_RS08095 PF01804 Penicillin amidase MADE_RS08100 PF00933 Glycosyl hydrolase family 3 N terminal domain MADE_RS08105 PF01923 Cobalamin adenosyltransferase MADE_RS08115 PF00271 Helicase conserved C-terminal domain MADE_RS08115 PF03461 TRCF domain MADE_RS08115 PF00270 DEAD/DEAH box helicase MADE_RS08115 PF17757 UvrB interaction domain MADE_RS08115 PF02559 CarD-like/TRCF domain MADE_RS08125 PF12704 MacB-like periplasmic core domain MADE_RS08125 PF02687 FtsX-like permease family MADE_RS08135 PF00072 Response regulator receiver domain MADE_RS08135 PF08448 PAS fold MADE_RS08135 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS08135 PF13188 PAS domain MADE_RS08150 PF03372 Endonuclease/Exonuclease/phosphatase family MADE_RS08185 PF07690 Major Facilitator Superfamily MADE_RS08195 PF00483 Nucleotidyl transferase MADE_RS08215 PF00682 HMGL-like MADE_RS08220 PF00289 Biotin carboxylase, N-terminal domain MADE_RS08220 PF18140 Propionyl-coenzyme A carboxylase BT domain MADE_RS08220 PF02785 Biotin carboxylase C-terminal domain MADE_RS08220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MADE_RS08220 PF00364 Biotin-requiring enzyme MADE_RS08225 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS08230 PF01039 Carboxyl transferase domain MADE_RS08235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS08235 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS08235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS08240 PF13411 MerR HTH family regulatory protein MADE_RS08245 PF00108 Thiolase, N-terminal domain MADE_RS08245 PF02803 Thiolase, C-terminal domain MADE_RS08250 PF07859 alpha/beta hydrolase fold MADE_RS08255 PF00266 Aminotransferase class-V MADE_RS08260 PF17151 Periplasmic sensor domain MADE_RS08260 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS08270 PF00929 Exonuclease MADE_RS08270 PF08411 Exonuclease C-terminal MADE_RS08275 PF01627 Hpt domain MADE_RS08275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS08275 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS08275 PF00072 Response regulator receiver domain MADE_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS08275 PF00672 HAMP domain MADE_RS08280 PF01112 Asparaginase MADE_RS08290 PF02333 Phytase MADE_RS08320 PF00270 DEAD/DEAH box helicase MADE_RS08320 PF04408 Helicase associated domain (HA2) MADE_RS08320 PF11898 Domain of unknown function (DUF3418) MADE_RS08320 PF00271 Helicase conserved C-terminal domain MADE_RS08320 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MADE_RS08335 PF17785 PUA-like domain MADE_RS08335 PF10672 S-adenosylmethionine-dependent methyltransferase MADE_RS08340 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS08340 PF16197 Ketoacyl-synthetase C-terminal extension MADE_RS08340 PF00109 Beta-ketoacyl synthase, N-terminal domain MADE_RS08340 PF02801 Beta-ketoacyl synthase, C-terminal domain MADE_RS08340 PF08659 KR domain MADE_RS08340 PF00550 Phosphopantetheine attachment site MADE_RS08340 PF14765 Polyketide synthase dehydratase MADE_RS08340 PF00698 Acyl transferase domain MADE_RS08345 PF00075 RNase H MADE_RS08350 PF00929 Exonuclease MADE_RS08375 PF00563 EAL domain MADE_RS08375 PF12792 CSS motif domain associated with EAL MADE_RS08380 PF00005 ABC transporter MADE_RS08385 PF02687 FtsX-like permease family MADE_RS08385 PF12704 MacB-like periplasmic core domain MADE_RS08390 PF00375 Sodium:dicarboxylate symporter family MADE_RS08400 PF04996 Succinylarginine dihydrolase MADE_RS08410 PF01396 Topoisomerase DNA binding C4 zinc finger MADE_RS08410 PF01751 Toprim domain MADE_RS08410 PF01131 DNA topoisomerase MADE_RS08410 PF08272 Topoisomerase I zinc-ribbon-like MADE_RS08425 PF12804 MobA-like NTP transferase domain MADE_RS08430 PF02634 FdhD/NarQ family MADE_RS08435 PF00384 Molybdopterin oxidoreductase MADE_RS08440 PF13673 Acetyltransferase (GNAT) domain MADE_RS08445 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS08455 PF10150 Ribonuclease E/G family MADE_RS08455 PF00575 S1 RNA binding domain MADE_RS08455 PF12111 Polyribonucleotide phosphorylase C terminal MADE_RS08460 PF00849 RNA pseudouridylate synthase MADE_RS08460 PF01479 S4 domain MADE_RS08465 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS08470 PF02545 Maf-like protein MADE_RS08475 PF02620 Large ribosomal RNA subunit accumulation protein YceD MADE_RS08480 PF01783 Ribosomal L32p protein family MADE_RS08495 PF00698 Acyl transferase domain MADE_RS08505 PF00550 Phosphopantetheine attachment site MADE_RS08510 PF00109 Beta-ketoacyl synthase, N-terminal domain MADE_RS08510 PF02801 Beta-ketoacyl synthase, C-terminal domain MADE_RS08515 PF01063 Amino-transferase class IV MADE_RS08520 PF02618 YceG-like family MADE_RS08525 PF02223 Thymidylate kinase MADE_RS08530 PF09115 DNA polymerase III, delta subunit, C terminal MADE_RS08535 PF01026 TatD related DNase MADE_RS08545 PF13460 NAD(P)H-binding MADE_RS08550 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS08550 PF08448 PAS fold MADE_RS08575 PF00561 alpha/beta hydrolase fold MADE_RS08580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MADE_RS08580 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS08580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MADE_RS08585 PF02803 Thiolase, C-terminal domain MADE_RS08585 PF00108 Thiolase, N-terminal domain MADE_RS08590 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS08590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS08590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS08590 PF12806 Acetyl-CoA dehydrogenase C-terminal like MADE_RS08605 PF04198 Putative sugar-binding domain MADE_RS08610 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS08620 PF08125 Mannitol dehydrogenase C-terminal domain MADE_RS08620 PF01232 Mannitol dehydrogenase Rossmann domain MADE_RS08625 PF05598 Transposase domain (DUF772) MADE_RS08625 PF01609 Transposase DDE domain MADE_RS08635 PF03466 LysR substrate binding domain MADE_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS08640 PF01575 MaoC like domain MADE_RS08645 PF00924 Mechanosensitive ion channel MADE_RS08650 PF07715 TonB-dependent Receptor Plug Domain MADE_RS08650 PF00593 TonB dependent receptor MADE_RS08655 PF01329 Pterin 4 alpha carbinolamine dehydratase MADE_RS08675 PF00672 HAMP domain MADE_RS08675 PF17149 Periplasmic sensor domain found in signal transduction proteins MADE_RS08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS08675 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS08675 PF01627 Hpt domain MADE_RS08675 PF00072 Response regulator receiver domain MADE_RS08680 PF00072 Response regulator receiver domain MADE_RS08685 PF17384 RimP C-terminal SH3 domain MADE_RS08685 PF02576 RimP N-terminal domain MADE_RS08690 PF13184 NusA-like KH domain MADE_RS08690 PF08529 NusA N-terminal domain MADE_RS08690 PF00575 S1 RNA binding domain MADE_RS08695 PF08364 Bacterial translation initiation factor IF-2 associated region MADE_RS08695 PF11987 Translation-initiation factor 2 MADE_RS08695 PF04760 Translation initiation factor IF-2, N-terminal region MADE_RS08695 PF00009 Elongation factor Tu GTP binding domain MADE_RS08700 PF02033 Ribosome-binding factor A MADE_RS08705 PF01509 TruB family pseudouridylate synthase (N terminal domain) MADE_RS08705 PF09157 Pseudouridine synthase II TruB, C-terminal MADE_RS08705 PF16198 tRNA pseudouridylate synthase B C-terminal domain MADE_RS08715 PF00312 Ribosomal protein S15 MADE_RS08720 PF00849 RNA pseudouridylate synthase MADE_RS08720 PF01479 S4 domain MADE_RS08730 PF00583 Acetyltransferase (GNAT) family MADE_RS08730 PF00795 Carbon-nitrogen hydrolase MADE_RS08760 PF10417 C-terminal domain of 1-Cys peroxiredoxin MADE_RS08760 PF00578 AhpC/TSA family MADE_RS08765 PF13192 Thioredoxin domain MADE_RS08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS08805 PF08497 Radical SAM N-terminal MADE_RS08805 PF11842 Domain of unknown function (DUF3362) MADE_RS08805 PF04055 Radical SAM superfamily MADE_RS08820 PF00593 TonB dependent receptor MADE_RS08820 PF07715 TonB-dependent Receptor Plug Domain MADE_RS08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS08825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS08835 PF13416 Bacterial extracellular solute-binding protein MADE_RS08845 PF00005 ABC transporter MADE_RS08850 PF01066 CDP-alcohol phosphatidyltransferase MADE_RS08875 PF00563 EAL domain MADE_RS08875 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS08875 PF00360 Phytochrome region MADE_RS08875 PF01590 GAF domain MADE_RS08915 PF00005 ABC transporter MADE_RS08920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MADE_RS08925 PF01668 SmpB protein MADE_RS08930 PF03364 Polyketide cyclase / dehydrase and lipid transport MADE_RS08935 PF03658 RnfH family Ubiquitin MADE_RS08945 PF02028 BCCT, betaine/carnitine/choline family transporter MADE_RS08950 PF00593 TonB dependent receptor MADE_RS08950 PF07715 TonB-dependent Receptor Plug Domain MADE_RS08955 PF13181 Tetratricopeptide repeat MADE_RS08965 PF03618 Kinase/pyrophosphorylase MADE_RS08970 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MADE_RS08970 PF02896 PEP-utilising enzyme, TIM barrel domain MADE_RS08970 PF00391 PEP-utilising enzyme, mobile domain MADE_RS08980 PF02371 Transposase IS116/IS110/IS902 family MADE_RS08980 PF01548 Transposase MADE_RS08985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MADE_RS08990 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS08990 PF01799 [2Fe-2S] binding domain MADE_RS09015 PF08007 Cupin superfamily protein MADE_RS09020 PF00211 Adenylate and Guanylate cyclase catalytic domain MADE_RS09025 PF08328 Adenylosuccinate lyase C-terminal MADE_RS09025 PF00206 Lyase MADE_RS09030 PF04356 Protein of unknown function (DUF489) MADE_RS09040 PF00849 RNA pseudouridylate synthase MADE_RS09045 PF03971 Monomeric isocitrate dehydrogenase MADE_RS09050 PF00313 'Cold-shock' DNA-binding domain MADE_RS09055 PF02617 ATP-dependent Clp protease adaptor protein ClpS MADE_RS09065 PF01176 Translation initiation factor 1A / IF-1 MADE_RS09070 PF04377 Arginine-tRNA-protein transferase, C terminus MADE_RS09070 PF04376 Arginine-tRNA-protein transferase, N terminus MADE_RS09075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MADE_RS09080 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS09085 PF04217 Protein of unknown function, DUF412 MADE_RS09090 PF10263 SprT-like family MADE_RS09095 PF01343 Peptidase family S49 MADE_RS09110 PF00881 Nitroreductase family MADE_RS09120 PF17763 Glutaminase/Asparaginase C-terminal domain MADE_RS09120 PF00710 Asparaginase, N-terminal MADE_RS09125 PF04055 Radical SAM superfamily MADE_RS09125 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MADE_RS09130 PF03099 Biotin/lipoate A/B protein ligase family MADE_RS09135 PF04359 Protein of unknown function (DUF493) MADE_RS09140 PF00768 D-alanyl-D-alanine carboxypeptidase MADE_RS09140 PF07943 Penicillin-binding protein 5, C-terminal domain MADE_RS09145 PF05036 Sporulation related domain MADE_RS09145 PF03330 Lytic transglycolase MADE_RS09150 PF01098 Cell cycle protein MADE_RS09155 PF00905 Penicillin binding protein transpeptidase domain MADE_RS09155 PF03717 Penicillin-binding Protein dimerisation domain MADE_RS09160 PF02590 Predicted SPOUT methyltransferase MADE_RS09170 PF01467 Cytidylyltransferase-like MADE_RS09175 PF06144 DNA polymerase III, delta subunit MADE_RS09175 PF14840 Processivity clamp loader gamma complex DNA pol III C-term MADE_RS09180 PF04390 Lipopolysaccharide-assembly MADE_RS09185 PF08264 Anticodon-binding domain of tRNA MADE_RS09185 PF00133 tRNA synthetases class I (I, L, M and V) MADE_RS09185 PF13603 Leucyl-tRNA synthetase, Domain 2 MADE_RS09195 PF05362 Lon protease (S16) C-terminal proteolytic domain MADE_RS09195 PF13654 AAA domain MADE_RS09200 PF12697 Alpha/beta hydrolase family MADE_RS09205 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS09210 PF00106 short chain dehydrogenase MADE_RS09215 PF01985 CRS1 / YhbY (CRM) domain MADE_RS09225 PF06480 FtsH Extracellular MADE_RS09225 PF01434 Peptidase family M41 MADE_RS09225 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS09225 PF17862 AAA+ lid domain MADE_RS09235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MADE_RS09235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MADE_RS09235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MADE_RS09235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MADE_RS09240 PF00121 Triosephosphate isomerase MADE_RS09245 PF03840 Preprotein translocase SecG subunit MADE_RS09255 PF13188 PAS domain MADE_RS09255 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS09255 PF00563 EAL domain MADE_RS09255 PF03707 Bacterial signalling protein N terminal repeat MADE_RS09270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MADE_RS09270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MADE_RS09275 PF00781 Diacylglycerol kinase catalytic domain MADE_RS09275 PF02142 MGS-like domain MADE_RS09305 PF00474 Sodium:solute symporter family MADE_RS09310 PF00696 Amino acid kinase family MADE_RS09315 PF00171 Aldehyde dehydrogenase family MADE_RS09360 PF13649 Methyltransferase domain MADE_RS09375 PF01548 Transposase MADE_RS09375 PF02371 Transposase IS116/IS110/IS902 family MADE_RS09470 PF07719 Tetratricopeptide repeat MADE_RS09470 PF13181 Tetratricopeptide repeat MADE_RS09485 PF06470 SMC proteins Flexible Hinge Domain MADE_RS09485 PF02463 RecF/RecN/SMC N terminal domain MADE_RS09490 PF04354 ZipA, C-terminal FtsZ-binding domain MADE_RS09510 PF00005 ABC transporter MADE_RS09510 PF00664 ABC transporter transmembrane region MADE_RS09515 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MADE_RS09520 PF03966 Trm112p-like protein MADE_RS09525 PF02348 Cytidylyltransferase MADE_RS09530 PF00106 short chain dehydrogenase MADE_RS09535 PF04055 Radical SAM superfamily MADE_RS09535 PF18693 TRAM domain MADE_RS09535 PF00919 Uncharacterized protein family UPF0004 MADE_RS09550 PF00899 ThiF family MADE_RS09555 PF13409 Glutathione S-transferase, N-terminal domain MADE_RS09560 PF05726 Pirin C-terminal cupin domain MADE_RS09560 PF02678 Pirin MADE_RS09565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MADE_RS09565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MADE_RS09565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MADE_RS09565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MADE_RS09575 PF00285 Citrate synthase, C-terminal domain MADE_RS09580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MADE_RS09585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MADE_RS09590 PF00890 FAD binding domain MADE_RS09590 PF02910 Fumarate reductase flavoprotein C-term MADE_RS09595 PF13085 2Fe-2S iron-sulfur cluster binding domain MADE_RS09600 PF16078 2-oxoglutarate dehydrogenase N-terminus MADE_RS09600 PF02779 Transketolase, pyrimidine binding domain MADE_RS09600 PF16870 2-oxoglutarate dehydrogenase C-terminal MADE_RS09600 PF00676 Dehydrogenase E1 component MADE_RS09605 PF02817 e3 binding domain MADE_RS09605 PF00364 Biotin-requiring enzyme MADE_RS09605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MADE_RS09610 PF00549 CoA-ligase MADE_RS09610 PF08442 ATP-grasp domain MADE_RS09615 PF02629 CoA binding domain MADE_RS09615 PF00549 CoA-ligase MADE_RS09625 PF04820 Tryptophan halogenase MADE_RS09635 PF11852 Domain of unknown function (DUF3372) MADE_RS09635 PF18494 Pullulanase Ins domain MADE_RS09635 PF17967 Pullulanase N2 domain MADE_RS09635 PF03714 Bacterial pullanase-associated domain MADE_RS09635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MADE_RS09640 PF01734 Patatin-like phospholipase MADE_RS09655 PF16657 Maltogenic Amylase, C-terminal domain MADE_RS09655 PF00128 Alpha amylase, catalytic domain MADE_RS09655 PF02903 Alpha amylase, N-terminal ig-like domain MADE_RS09660 PF09087 Cyclomaltodextrinase, N-terminal MADE_RS09660 PF10438 Cyclo-malto-dextrinase C-terminal domain MADE_RS09660 PF00128 Alpha amylase, catalytic domain MADE_RS09670 PF02806 Alpha amylase, C-terminal all-beta domain MADE_RS09670 PF00686 Starch binding domain MADE_RS09670 PF01833 IPT/TIG domain MADE_RS09670 PF00128 Alpha amylase, catalytic domain MADE_RS09675 PF00356 Bacterial regulatory proteins, lacI family MADE_RS09680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MADE_RS09680 PF00749 tRNA synthetases class I (E and Q), catalytic domain MADE_RS09685 PF00106 short chain dehydrogenase MADE_RS09690 PF12262 Bacterial virulence factor lipase N-terminal MADE_RS09695 PF01804 Penicillin amidase MADE_RS09700 PF08496 Peptidase family S49 N-terminal MADE_RS09700 PF01343 Peptidase family S49 MADE_RS09715 PF01784 NIF3 (NGG1p interacting factor 3) MADE_RS09720 PF13847 Methyltransferase domain MADE_RS09725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MADE_RS09725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MADE_RS09730 PF00255 Glutathione peroxidase MADE_RS09735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MADE_RS09735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MADE_RS09745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS09745 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS09745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS09750 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS09755 PF13847 Methyltransferase domain MADE_RS09765 PF11893 Domain of unknown function (DUF3413) MADE_RS09765 PF00884 Sulfatase MADE_RS09770 PF07208 Protein of unknown function (DUF1414) MADE_RS09775 PF04245 37-kD nucleoid-associated bacterial protein MADE_RS09805 PF07694 5TMR of 5TMR-LYT MADE_RS09805 PF06580 Histidine kinase MADE_RS09810 PF04397 LytTr DNA-binding domain MADE_RS09810 PF00072 Response regulator receiver domain MADE_RS09815 PF00365 Phosphofructokinase MADE_RS09835 PF01609 Transposase DDE domain MADE_RS09835 PF13808 DDE_Tnp_1-associated MADE_RS09840 PF13737 Transposase DDE domain MADE_RS09845 PF00107 Zinc-binding dehydrogenase MADE_RS09845 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS09850 PF14765 Polyketide synthase dehydratase MADE_RS09850 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS09850 PF00698 Acyl transferase domain MADE_RS09850 PF00550 Phosphopantetheine attachment site MADE_RS09850 PF08659 KR domain MADE_RS09855 PF00106 short chain dehydrogenase MADE_RS09860 PF03466 LysR substrate binding domain MADE_RS09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS09900 PF00497 Bacterial extracellular solute-binding proteins, family 3 MADE_RS09900 PF01627 Hpt domain MADE_RS09900 PF00989 PAS fold MADE_RS09900 PF00072 Response regulator receiver domain MADE_RS09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS09900 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS09910 PF00581 Rhodanese-like domain MADE_RS09910 PF17773 UPF0176 acylphosphatase like domain MADE_RS09920 PF00270 DEAD/DEAH box helicase MADE_RS09920 PF00271 Helicase conserved C-terminal domain MADE_RS09925 PF01144 Coenzyme A transferase MADE_RS09930 PF01144 Coenzyme A transferase MADE_RS09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS09935 PF03466 LysR substrate binding domain MADE_RS09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS09950 PF03466 LysR substrate binding domain MADE_RS09960 PF00293 NUDIX domain MADE_RS09965 PF00425 chorismate binding enzyme MADE_RS09965 PF04715 Anthranilate synthase component I, N terminal region MADE_RS09980 PF02646 RmuC family MADE_RS09985 PF00082 Subtilase family MADE_RS09985 PF02225 PA domain MADE_RS09985 PF13860 FlgD Ig-like domain MADE_RS09985 PF05922 Peptidase inhibitor I9 MADE_RS09990 PF13340 Putative transposase of IS4/5 family (DUF4096) MADE_RS09995 PF00676 Dehydrogenase E1 component MADE_RS10000 PF02780 Transketolase, C-terminal domain MADE_RS10000 PF02779 Transketolase, pyrimidine binding domain MADE_RS10005 PF02817 e3 binding domain MADE_RS10005 PF00364 Biotin-requiring enzyme MADE_RS10005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MADE_RS10010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MADE_RS10015 PF00069 Protein kinase domain MADE_RS10025 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS10030 PF00266 Aminotransferase class-V MADE_RS10040 PF13185 GAF domain MADE_RS10050 PF17516 ProQ C-terminal domain MADE_RS10050 PF04352 ProQ/FINO family MADE_RS10055 PF17804 Tail specific protease N-terminal domain MADE_RS10055 PF00595 PDZ domain MADE_RS10055 PF11818 C-terminal domain of tail specific protease (DUF3340) MADE_RS10055 PF03572 Peptidase family S41 MADE_RS10060 PF00209 Sodium:neurotransmitter symporter family MADE_RS10065 PF03553 Na+/H+ antiporter family MADE_RS10070 PF01433 Peptidase family M1 domain MADE_RS10070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MADE_RS10070 PF11940 Domain of unknown function (DUF3458) Ig-like fold MADE_RS10085 PF07044 Protein of unknown function (DUF1329) MADE_RS10100 PF05088 Bacterial NAD-glutamate dehydrogenase MADE_RS10105 PF01180 Dihydroorotate dehydrogenase MADE_RS10110 PF10672 S-adenosylmethionine-dependent methyltransferase MADE_RS10110 PF02926 THUMP domain MADE_RS10110 PF01170 Putative RNA methylase family UPF0020 MADE_RS10120 PF00005 ABC transporter MADE_RS10120 PF16326 ABC transporter C-terminal domain MADE_RS10120 PF12848 ABC transporter MADE_RS10130 PF04957 Ribosome modulation factor MADE_RS10135 PF07977 FabA-like domain MADE_RS10150 PF03441 FAD binding domain of DNA photolyase MADE_RS10150 PF00875 DNA photolyase MADE_RS10160 PF03441 FAD binding domain of DNA photolyase MADE_RS10160 PF00875 DNA photolyase MADE_RS10165 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MADE_RS10175 PF01526 Tn3 transposase DDE domain MADE_RS10175 PF13700 Domain of unknown function (DUF4158) MADE_RS10185 PF13411 MerR HTH family regulatory protein MADE_RS10205 PF00529 HlyD membrane-fusion protein of T1SS MADE_RS10205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS10210 PF00873 AcrB/AcrD/AcrF family MADE_RS10215 PF16916 Dimerisation domain of Zinc Transporter MADE_RS10215 PF01545 Cation efflux family MADE_RS10235 PF00873 AcrB/AcrD/AcrF family MADE_RS10240 PF00593 TonB dependent receptor MADE_RS10240 PF07660 Secretin and TonB N terminus short domain MADE_RS10240 PF07715 TonB-dependent Receptor Plug Domain MADE_RS10270 PF13411 MerR HTH family regulatory protein MADE_RS10280 PF00403 Heavy-metal-associated domain MADE_RS10285 PF00403 Heavy-metal-associated domain MADE_RS10285 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS10285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS10290 PF00589 Phage integrase family MADE_RS10290 PF02899 Phage integrase, N-terminal SAM-like domain MADE_RS10300 PF01219 Prokaryotic diacylglycerol kinase MADE_RS10315 PF01645 Conserved region in glutamate synthase MADE_RS10320 PF00999 Sodium/hydrogen exchanger family MADE_RS10325 PF00210 Ferritin-like domain MADE_RS10330 PF00210 Ferritin-like domain MADE_RS10340 PF00115 Cytochrome C and Quinol oxidase polypeptide I MADE_RS10365 PF00403 Heavy-metal-associated domain MADE_RS10380 PF00027 Cyclic nucleotide-binding domain MADE_RS10380 PF13545 Crp-like helix-turn-helix domain MADE_RS10385 PF00582 Universal stress protein family MADE_RS10390 PF01171 PP-loop family MADE_RS10395 PF01734 Patatin-like phospholipase MADE_RS10415 PF01810 LysE type translocator MADE_RS10420 PF02146 Sir2 family MADE_RS10425 PF00581 Rhodanese-like domain MADE_RS10430 PF08534 Redoxin MADE_RS10435 PF03942 DTW domain MADE_RS10485 PF00589 Phage integrase family MADE_RS10485 PF13356 Arm DNA-binding domain MADE_RS10505 PF01066 CDP-alcohol phosphatidyltransferase MADE_RS10510 PF01541 GIY-YIG catalytic domain MADE_RS10510 PF08459 UvrC Helix-hairpin-helix N-terminal MADE_RS10510 PF02151 UvrB/uvrC motif MADE_RS10515 PF00072 Response regulator receiver domain MADE_RS10515 PF00196 Bacterial regulatory proteins, luxR family MADE_RS10520 PF00155 Aminotransferase class I and II MADE_RS10540 PF07681 DoxX MADE_RS10545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS10545 PF03466 LysR substrate binding domain MADE_RS10560 PF01027 Inhibitor of apoptosis-promoting Bax1 MADE_RS10580 PF04358 DsrC like protein MADE_RS10600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MADE_RS10600 PF02403 Seryl-tRNA synthetase N-terminal domain MADE_RS10605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MADE_RS10610 PF16193 AAA C-terminal domain MADE_RS10610 PF12002 MgsA AAA+ ATPase C terminal MADE_RS10610 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS10625 PF01037 Lrp/AsnC ligand binding domain MADE_RS10630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MADE_RS10630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MADE_RS10635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MADE_RS10640 PF18073 Rubredoxin metal binding domain MADE_RS10665 PF02224 Cytidylate kinase MADE_RS10670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MADE_RS10675 PF00266 Aminotransferase class-V MADE_RS10690 PF02867 Ribonucleotide reductase, barrel domain MADE_RS10690 PF00317 Ribonucleotide reductase, all-alpha domain MADE_RS10690 PF03477 ATP cone domain MADE_RS10695 PF00268 Ribonucleotide reductase, small chain MADE_RS10700 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS10715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MADE_RS10715 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS10720 PF03707 Bacterial signalling protein N terminal repeat MADE_RS10720 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS10720 PF00563 EAL domain MADE_RS10725 PF00892 EamA-like transporter family MADE_RS10730 PF01259 SAICAR synthetase MADE_RS10735 PF06804 NlpB/DapX lipoprotein MADE_RS10750 PF00578 AhpC/TSA family MADE_RS10755 PF01594 AI-2E family transporter MADE_RS10760 PF01435 Peptidase family M48 MADE_RS10770 PF03960 ArsC family MADE_RS10775 PF03358 NADPH-dependent FMN reductase MADE_RS10785 PF00308 Bacterial dnaA protein MADE_RS10795 PF00586 AIR synthase related protein, N-terminal domain MADE_RS10795 PF02769 AIR synthase related protein, C-terminal domain MADE_RS10800 PF00551 Formyl transferase MADE_RS10810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS10810 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS10810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS10810 PF09317 Domain of unknown function (DUF1974) MADE_RS10820 PF00196 Bacterial regulatory proteins, luxR family MADE_RS10820 PF00072 Response regulator receiver domain MADE_RS10825 PF13649 Methyltransferase domain MADE_RS10830 PF08003 Protein of unknown function (DUF1698) MADE_RS10835 PF00485 Phosphoribulokinase / Uridine kinase family MADE_RS10850 PF00128 Alpha amylase, catalytic domain MADE_RS10855 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS10860 PF00994 Probable molybdopterin binding domain MADE_RS10860 PF03454 MoeA C-terminal region (domain IV) MADE_RS10860 PF03453 MoeA N-terminal region (domain I and II) MADE_RS10865 PF01554 MatE MADE_RS10880 PF01434 Peptidase family M41 MADE_RS10880 PF17862 AAA+ lid domain MADE_RS10880 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS10885 PF00291 Pyridoxal-phosphate dependent enzyme MADE_RS10925 PF01548 Transposase MADE_RS10925 PF02371 Transposase IS116/IS110/IS902 family MADE_RS10945 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system MADE_RS10985 PF02567 Phenazine biosynthesis-like protein MADE_RS10995 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS11010 PF00255 Glutathione peroxidase MADE_RS11025 PF02525 Flavodoxin-like fold MADE_RS11035 PF01053 Cys/Met metabolism PLP-dependent enzyme MADE_RS11050 PF00155 Aminotransferase class I and II MADE_RS11055 PF10459 Peptidase S46 MADE_RS11060 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MADE_RS11075 PF12806 Acetyl-CoA dehydrogenase C-terminal like MADE_RS11075 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS11080 PF07883 Cupin domain MADE_RS11080 PF12833 Helix-turn-helix domain MADE_RS11085 PF07715 TonB-dependent Receptor Plug Domain MADE_RS11085 PF00593 TonB dependent receptor MADE_RS11095 PF00326 Prolyl oligopeptidase family MADE_RS11095 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MADE_RS11100 PF00873 AcrB/AcrD/AcrF family MADE_RS11105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS11115 PF00766 Electron transfer flavoprotein FAD-binding domain MADE_RS11115 PF01012 Electron transfer flavoprotein domain MADE_RS11120 PF01012 Electron transfer flavoprotein domain MADE_RS11130 PF00816 H-NS histone family MADE_RS11140 PF00561 alpha/beta hydrolase fold MADE_RS11150 PF00258 Flavodoxin MADE_RS11155 PF00672 HAMP domain MADE_RS11155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS11160 PF01475 Ferric uptake regulator family MADE_RS11165 PF01063 Amino-transferase class IV MADE_RS11170 PF02626 Carboxyltransferase domain, subdomain A and B MADE_RS11175 PF02682 Carboxyltransferase domain, subdomain C and D MADE_RS11180 PF03746 LamB/YcsF family MADE_RS11185 PF17783 CvfB-like winged helix domain MADE_RS11185 PF13509 S1 domain MADE_RS11190 PF02566 OsmC-like protein MADE_RS11195 PF13533 Biotin-lipoyl like MADE_RS11200 PF00873 AcrB/AcrD/AcrF family MADE_RS11205 PF00873 AcrB/AcrD/AcrF family MADE_RS11220 PF00155 Aminotransferase class I and II MADE_RS11230 PF01966 HD domain MADE_RS11230 PF13286 Phosphohydrolase-associated domain MADE_RS11235 PF00174 Oxidoreductase molybdopterin binding domain MADE_RS11240 PF01794 Ferric reductase like transmembrane component MADE_RS11255 PF02810 SEC-C motif MADE_RS11260 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS11260 PF00107 Zinc-binding dehydrogenase MADE_RS11270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS11270 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS11270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS11280 PF07715 TonB-dependent Receptor Plug Domain MADE_RS11280 PF00593 TonB dependent receptor MADE_RS11300 PF04055 Radical SAM superfamily MADE_RS11300 PF06969 HemN C-terminal domain MADE_RS11305 PF03459 TOBE domain MADE_RS11305 PF00005 ABC transporter MADE_RS11310 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS11320 PF02391 MoaE protein MADE_RS11325 PF02597 ThiS family MADE_RS11330 PF01967 MoaC family MADE_RS11335 PF00994 Probable molybdopterin binding domain MADE_RS11340 PF00899 ThiF family MADE_RS11350 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system MADE_RS11355 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MADE_RS11370 PF00155 Aminotransferase class I and II MADE_RS11375 PF03435 Saccharopine dehydrogenase NADP binding domain MADE_RS11380 PF00155 Aminotransferase class I and II MADE_RS11395 PF01717 Cobalamin-independent synthase, Catalytic domain MADE_RS11400 PF00593 TonB dependent receptor MADE_RS11400 PF07715 TonB-dependent Receptor Plug Domain MADE_RS11410 PF00892 EamA-like transporter family MADE_RS11425 PF13538 UvrD-like helicase C-terminal domain MADE_RS11430 PF13361 UvrD-like helicase C-terminal domain MADE_RS11430 PF00580 UvrD/REP helicase N-terminal domain MADE_RS11430 PF12705 PD-(D/E)XK nuclease superfamily MADE_RS11435 PF17946 RecC C-terminal domain MADE_RS11445 PF00501 AMP-binding enzyme MADE_RS11450 PF00563 EAL domain MADE_RS11450 PF00360 Phytochrome region MADE_RS11450 PF01590 GAF domain MADE_RS11450 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS11455 PF12706 Beta-lactamase superfamily domain MADE_RS11455 PF17770 Ribonuclease J C-terminal domain MADE_RS11455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MADE_RS11470 PF03466 LysR substrate binding domain MADE_RS11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS11485 PF01022 Bacterial regulatory protein, arsR family MADE_RS11495 PF03466 LysR substrate binding domain MADE_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS11505 PF00072 Response regulator receiver domain MADE_RS11505 PF00158 Sigma-54 interaction domain MADE_RS11505 PF02954 Bacterial regulatory protein, Fis family MADE_RS11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS11515 PF01590 GAF domain MADE_RS11515 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS11515 PF00360 Phytochrome region MADE_RS11515 PF08446 PAS fold MADE_RS11520 PF00072 Response regulator receiver domain MADE_RS11525 PF00072 Response regulator receiver domain MADE_RS11525 PF09308 LuxQ, periplasmic MADE_RS11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS11525 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS11575 PF07023 Protein of unknown function (DUF1315) MADE_RS11590 PF01235 Sodium:alanine symporter family MADE_RS11595 PF00246 Zinc carboxypeptidase MADE_RS11595 PF18027 Cytosolic carboxypeptidase N-terminal domain MADE_RS11600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MADE_RS11600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MADE_RS11610 PF01641 SelR domain MADE_RS11615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MADE_RS11615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MADE_RS11620 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MADE_RS11620 PF00128 Alpha amylase, catalytic domain MADE_RS11625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MADE_RS11625 PF02806 Alpha amylase, C-terminal all-beta domain MADE_RS11625 PF00128 Alpha amylase, catalytic domain MADE_RS11630 PF02446 4-alpha-glucanotransferase MADE_RS11635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MADE_RS11635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MADE_RS11640 PF01263 Aldose 1-epimerase MADE_RS11645 PF01081 KDPG and KHG aldolase MADE_RS11650 PF02685 Glucokinase MADE_RS11655 PF00920 Dehydratase family MADE_RS11660 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MADE_RS11665 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MADE_RS11665 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MADE_RS11670 PF01418 Helix-turn-helix domain, rpiR family MADE_RS11670 PF01380 SIS domain MADE_RS11675 PF00224 Pyruvate kinase, barrel domain MADE_RS11675 PF02887 Pyruvate kinase, alpha/beta domain MADE_RS11680 PF01048 Phosphorylase superfamily MADE_RS11690 PF08787 Alginate lyase MADE_RS11695 PF04972 BON domain MADE_RS11725 PF09347 Domain of unknown function (DUF1989) MADE_RS11740 PF00072 Response regulator receiver domain MADE_RS11740 PF00672 HAMP domain MADE_RS11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS11740 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS11740 PF01627 Hpt domain MADE_RS11740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS11760 PF04231 Endonuclease I MADE_RS11765 PF00672 HAMP domain MADE_RS11765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS11765 PF17200 Single Cache domain 2 MADE_RS11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS11780 PF03466 LysR substrate binding domain MADE_RS11785 PF00465 Iron-containing alcohol dehydrogenase MADE_RS11790 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS11790 PF00563 EAL domain MADE_RS11790 PF03707 Bacterial signalling protein N terminal repeat MADE_RS11795 PF00881 Nitroreductase family MADE_RS11800 PF11849 Domain of unknown function (DUF3369) MADE_RS11805 PF08447 PAS fold MADE_RS11805 PF08448 PAS fold MADE_RS11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS11815 PF00589 Phage integrase family MADE_RS11840 PF00239 Resolvase, N terminal domain MADE_RS11840 PF02796 Helix-turn-helix domain of resolvase MADE_RS11860 PF00939 Sodium:sulfate symporter transmembrane region MADE_RS11865 PF00692 dUTPase MADE_RS11870 PF10609 NUBPL iron-transfer P-loop NTPase MADE_RS11875 PF09334 tRNA synthetases class I (M) MADE_RS11875 PF08264 Anticodon-binding domain of tRNA MADE_RS11875 PF01588 Putative tRNA binding domain MADE_RS11880 PF05552 Conserved TM helix MADE_RS11880 PF00924 Mechanosensitive ion channel MADE_RS11885 PF08241 Methyltransferase domain MADE_RS11890 PF00753 Metallo-beta-lactamase superfamily MADE_RS11890 PF16123 Hydroxyacylglutathione hydrolase C-terminus MADE_RS11895 PF01464 Transglycosylase SLT domain MADE_RS11895 PF01476 LysM domain MADE_RS11920 PF09190 DALR domain MADE_RS11920 PF01406 tRNA synthetases class I (C) catalytic domain MADE_RS11925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MADE_RS11930 PF00149 Calcineurin-like phosphoesterase MADE_RS11940 PF01145 SPFH domain / Band 7 family MADE_RS11940 PF15975 Flotillin MADE_RS11950 PF00128 Alpha amylase, catalytic domain MADE_RS11955 PF01638 HxlR-like helix-turn-helix MADE_RS11960 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS11960 PF00107 Zinc-binding dehydrogenase MADE_RS11970 PF18011 C-terminal domain found in long catalases MADE_RS11970 PF06628 Catalase-related immune-responsive MADE_RS11970 PF00199 Catalase MADE_RS11975 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS11975 PF00107 Zinc-binding dehydrogenase MADE_RS11995 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MADE_RS12005 PF00156 Phosphoribosyl transferase domain MADE_RS12015 PF05036 Sporulation related domain MADE_RS12020 PF02875 Mur ligase family, glutamate ligase domain MADE_RS12020 PF08245 Mur ligase middle domain MADE_RS12025 PF17848 Acetyl-coA carboxylase zinc finger domain MADE_RS12025 PF01039 Carboxyl transferase domain MADE_RS12035 PF01416 tRNA pseudouridine synthase MADE_RS12045 PF01118 Semialdehyde dehydrogenase, NAD binding domain MADE_RS12045 PF02774 Semialdehyde dehydrogenase, dimerisation domain MADE_RS12050 PF11890 Domain of unknown function (DUF3410) MADE_RS12050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MADE_RS12050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MADE_RS12055 PF00596 Class II Aldolase and Adducin N-terminal domain MADE_RS12070 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MADE_RS12075 PF00144 Beta-lactamase MADE_RS12080 PF00109 Beta-ketoacyl synthase, N-terminal domain MADE_RS12080 PF02801 Beta-ketoacyl synthase, C-terminal domain MADE_RS12085 PF13193 AMP-binding enzyme C-terminal domain MADE_RS12085 PF00501 AMP-binding enzyme MADE_RS12095 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MADE_RS12095 PF01266 FAD dependent oxidoreductase MADE_RS12130 PF13411 MerR HTH family regulatory protein MADE_RS12135 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS12135 PF00107 Zinc-binding dehydrogenase MADE_RS12140 PF02371 Transposase IS116/IS110/IS902 family MADE_RS12140 PF01548 Transposase MADE_RS12160 PF00005 ABC transporter MADE_RS12165 PF02667 Short chain fatty acid transporter MADE_RS12170 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS12170 PF00672 HAMP domain MADE_RS12170 PF01627 Hpt domain MADE_RS12170 PF00072 Response regulator receiver domain MADE_RS12170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS12175 PF02627 Carboxymuconolactone decarboxylase family MADE_RS12180 PF00675 Insulinase (Peptidase family M16) MADE_RS12180 PF05193 Peptidase M16 inactive domain MADE_RS12195 PF04315 Elongation factor P hydroxylase MADE_RS12225 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS12225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MADE_RS12230 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS12235 PF00440 Bacterial regulatory proteins, tetR family MADE_RS12235 PF02909 Tetracyclin repressor-like, C-terminal domain MADE_RS12240 PF05199 GMC oxidoreductase MADE_RS12240 PF00732 GMC oxidoreductase MADE_RS12250 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MADE_RS12250 PF06974 Protein of unknown function (DUF1298) MADE_RS12260 PF04286 Protein of unknown function (DUF445) MADE_RS12290 PF00326 Prolyl oligopeptidase family MADE_RS12290 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MADE_RS12295 PF00392 Bacterial regulatory proteins, gntR family MADE_RS12295 PF07840 FadR C-terminal domain MADE_RS12300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MADE_RS12305 PF02600 Disulfide bond formation protein DsbB MADE_RS12310 PF13302 Acetyltransferase (GNAT) domain MADE_RS12320 PF03692 Putative zinc- or iron-chelating domain MADE_RS12325 PF01557 Fumarylacetoacetate (FAA) hydrolase family MADE_RS12335 PF05166 YcgL domain MADE_RS12340 PF00570 HRDC domain MADE_RS12340 PF01612 3'-5' exonuclease MADE_RS12345 PF13193 AMP-binding enzyme C-terminal domain MADE_RS12345 PF00501 AMP-binding enzyme MADE_RS12350 PF12697 Alpha/beta hydrolase family MADE_RS12365 PF00814 Glycoprotease family MADE_RS12370 PF13307 Helicase C-terminal domain MADE_RS12370 PF06733 DEAD_2 MADE_RS12395 PF00128 Alpha amylase, catalytic domain MADE_RS12420 PF00593 TonB dependent receptor MADE_RS12420 PF07715 TonB-dependent Receptor Plug Domain MADE_RS12430 PF08029 HisG, C-terminal domain MADE_RS12430 PF01634 ATP phosphoribosyltransferase MADE_RS12435 PF00815 Histidinol dehydrogenase MADE_RS12440 PF00155 Aminotransferase class I and II MADE_RS12445 PF00475 Imidazoleglycerol-phosphate dehydratase MADE_RS12450 PF00117 Glutamine amidotransferase class-I MADE_RS12455 PF00977 Histidine biosynthesis protein MADE_RS12460 PF00977 Histidine biosynthesis protein MADE_RS12465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MADE_RS12465 PF01502 Phosphoribosyl-AMP cyclohydrolase MADE_RS12470 PF01226 Formate/nitrite transporter MADE_RS12475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS12475 PF00672 HAMP domain MADE_RS12485 PF00593 TonB dependent receptor MADE_RS12485 PF07715 TonB-dependent Receptor Plug Domain MADE_RS12495 PF05191 Adenylate kinase, active site lid MADE_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS12500 PF00183 Hsp90 protein MADE_RS12505 PF13662 Toprim domain MADE_RS12505 PF02132 RecR protein MADE_RS12515 PF00563 EAL domain MADE_RS12515 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS12515 PF03707 Bacterial signalling protein N terminal repeat MADE_RS12520 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS12520 PF01590 GAF domain MADE_RS12520 PF00360 Phytochrome region MADE_RS12520 PF08446 PAS fold MADE_RS12525 PF02575 YbaB/EbfC DNA-binding family MADE_RS12530 PF12169 DNA polymerase III subunits gamma and tau domain III MADE_RS12530 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MADE_RS12530 PF12170 DNA polymerase III tau subunit V interacting with alpha MADE_RS12535 PF00156 Phosphoribosyl transferase domain MADE_RS12545 PF05114 Protein of unknown function (DUF692) MADE_RS12555 PF02687 FtsX-like permease family MADE_RS12555 PF00005 ABC transporter MADE_RS12555 PF12704 MacB-like periplasmic core domain MADE_RS12565 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS12565 PF00563 EAL domain MADE_RS12565 PF00360 Phytochrome region MADE_RS12565 PF01590 GAF domain MADE_RS12595 PF01066 CDP-alcohol phosphatidyltransferase MADE_RS12615 PF01565 FAD binding domain MADE_RS12615 PF09330 D-lactate dehydrogenase, membrane binding MADE_RS12620 PF10431 C-terminal, D2-small domain, of ClpB protein MADE_RS12620 PF02861 Clp amino terminal domain, pathogenicity island component MADE_RS12620 PF07724 AAA domain (Cdc48 subfamily) MADE_RS12620 PF17871 AAA lid domain MADE_RS12620 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS12625 PF02578 Multi-copper polyphenol oxidoreductase laccase MADE_RS12630 PF01479 S4 domain MADE_RS12630 PF00849 RNA pseudouridylate synthase MADE_RS12635 PF13525 Outer membrane lipoprotein MADE_RS12645 PF04542 Sigma-70 region 2 MADE_RS12645 PF04545 Sigma-70, region 4 MADE_RS12660 PF00106 short chain dehydrogenase MADE_RS12680 PF13677 Membrane MotB of proton-channel complex MotA/MotB MADE_RS12680 PF00691 OmpA family MADE_RS12685 PF01618 MotA/TolQ/ExbB proton channel family MADE_RS12690 PF02609 Exonuclease VII small subunit MADE_RS12695 PF00348 Polyprenyl synthetase MADE_RS12700 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MADE_RS12700 PF02779 Transketolase, pyrimidine binding domain MADE_RS12700 PF02780 Transketolase, C-terminal domain MADE_RS12705 PF04608 Phosphatidylglycerophosphatase A MADE_RS12710 PF02769 AIR synthase related protein, C-terminal domain MADE_RS12710 PF00586 AIR synthase related protein, N-terminal domain MADE_RS12715 PF01029 NusB family MADE_RS12720 PF00885 6,7-dimethyl-8-ribityllumazine synthase MADE_RS12725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MADE_RS12725 PF00925 GTP cyclohydrolase II MADE_RS12730 PF00677 Lumazine binding domain MADE_RS12735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MADE_RS12735 PF01872 RibD C-terminal domain MADE_RS12740 PF03477 ATP cone domain MADE_RS12745 PF00464 Serine hydroxymethyltransferase MADE_RS12750 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MADE_RS12750 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS12755 PF00005 ABC transporter MADE_RS12755 PF12848 ABC transporter MADE_RS12765 PF18073 Rubredoxin metal binding domain MADE_RS12775 PF18429 Domain of unknown function (DUF5609) MADE_RS12785 PF01026 TatD related DNase MADE_RS12790 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MADE_RS12790 PF01243 Pyridoxamine 5'-phosphate oxidase MADE_RS12795 PF01926 50S ribosome-binding GTPase MADE_RS12795 PF07650 KH domain MADE_RS12800 PF14622 Ribonuclease-III-like MADE_RS12800 PF00035 Double-stranded RNA binding motif MADE_RS12805 PF10502 Signal peptidase, peptidase S26 MADE_RS12810 PF00679 Elongation factor G C-terminus MADE_RS12810 PF00009 Elongation factor Tu GTP binding domain MADE_RS12810 PF03144 Elongation factor Tu domain 2 MADE_RS12810 PF06421 GTP-binding protein LepA C-terminus MADE_RS12820 PF17188 MucB/RseB C-terminal domain MADE_RS12820 PF03888 MucB/RseB N-terminal domain MADE_RS12830 PF08281 Sigma-70, region 4 MADE_RS12830 PF04542 Sigma-70 region 2 MADE_RS12835 PF02910 Fumarate reductase flavoprotein C-term MADE_RS12835 PF00890 FAD binding domain MADE_RS12850 PF03937 Flavinator of succinate dehydrogenase MADE_RS12860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MADE_RS12865 PF00543 Nitrogen regulatory protein P-II MADE_RS12870 PF02540 NAD synthase MADE_RS12905 PF07963 Prokaryotic N-terminal methylation motif MADE_RS12905 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MADE_RS12930 PF02401 LytB protein MADE_RS12935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MADE_RS12940 PF01252 Signal peptidase (SPase) II MADE_RS12945 PF00133 tRNA synthetases class I (I, L, M and V) MADE_RS12945 PF06827 Zinc finger found in FPG and IleRS MADE_RS12945 PF08264 Anticodon-binding domain of tRNA MADE_RS12950 PF06574 FAD synthetase MADE_RS12950 PF01687 Riboflavin kinase MADE_RS12955 PF03023 Lipid II flippase MurJ MADE_RS12960 PF01649 Ribosomal protein S20 MADE_RS12975 PF00106 short chain dehydrogenase MADE_RS12980 PF01758 Sodium Bile acid symporter family MADE_RS13000 PF07687 Peptidase dimerisation domain MADE_RS13000 PF01546 Peptidase family M20/M25/M40 MADE_RS13010 PF13145 PPIC-type PPIASE domain MADE_RS13015 PF00216 Bacterial DNA-binding protein MADE_RS13020 PF05362 Lon protease (S16) C-terminal proteolytic domain MADE_RS13020 PF02190 ATP-dependent protease La (LON) substrate-binding domain MADE_RS13020 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS13025 PF06689 ClpX C4-type zinc finger MADE_RS13025 PF07724 AAA domain (Cdc48 subfamily) MADE_RS13025 PF10431 C-terminal, D2-small domain, of ClpB protein MADE_RS13030 PF00574 Clp protease MADE_RS13035 PF05698 Bacterial trigger factor protein (TF) C-terminus MADE_RS13035 PF05697 Bacterial trigger factor protein (TF) MADE_RS13035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MADE_RS13065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MADE_RS13065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MADE_RS13075 PF18389 TrmO C-terminal domain MADE_RS13075 PF01980 tRNA-methyltransferase O MADE_RS13080 PF03129 Anticodon binding domain MADE_RS13080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MADE_RS13085 PF00753 Metallo-beta-lactamase superfamily MADE_RS13085 PF12706 Beta-lactamase superfamily domain MADE_RS13090 PF02253 Phospholipase A1 MADE_RS13100 PF00672 HAMP domain MADE_RS13100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS13115 PF00117 Glutamine amidotransferase class-I MADE_RS13115 PF02540 NAD synthase MADE_RS13115 PF00958 GMP synthase C terminal domain MADE_RS13120 PF00571 CBS domain MADE_RS13120 PF00478 IMP dehydrogenase / GMP reductase domain MADE_RS13125 PF02601 Exonuclease VII, large subunit MADE_RS13125 PF13742 OB-fold nucleic acid binding domain MADE_RS13140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MADE_RS13140 PF01926 50S ribosome-binding GTPase MADE_RS13145 PF13360 PQQ-like domain MADE_RS13150 PF09976 Tetratricopeptide repeat-like domain MADE_RS13155 PF13393 Histidyl-tRNA synthetase MADE_RS13155 PF03129 Anticodon binding domain MADE_RS13160 PF04551 GcpE protein MADE_RS13165 PF13464 Domain of unknown function (DUF4115) MADE_RS13175 PF04055 Radical SAM superfamily MADE_RS13180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MADE_RS13190 PF00334 Nucleoside diphosphate kinase MADE_RS13195 PF02657 Fe-S metabolism associated domain MADE_RS13200 PF01883 Iron-sulfur cluster assembly protein MADE_RS13205 PF01521 Iron-sulphur cluster biosynthesis MADE_RS13210 PF00266 Aminotransferase class-V MADE_RS13215 PF01458 Uncharacterized protein family (UPF0051) MADE_RS13220 PF00005 ABC transporter MADE_RS13225 PF01458 Uncharacterized protein family (UPF0051) MADE_RS13230 PF00266 Aminotransferase class-V MADE_RS13235 PF02082 Transcriptional regulator MADE_RS13240 PF00743 Flavin-binding monooxygenase-like MADE_RS13245 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS13245 PF06426 Serine acetyltransferase, N-terminal MADE_RS13250 PF00588 SpoU rRNA Methylase family MADE_RS13255 PF00459 Inositol monophosphatase family MADE_RS13270 PF02355 Protein export membrane protein MADE_RS13270 PF07549 SecD/SecF GG Motif MADE_RS13275 PF02355 Protein export membrane protein MADE_RS13275 PF13721 SecD export protein N-terminal TM region MADE_RS13275 PF07549 SecD/SecF GG Motif MADE_RS13280 PF02699 Preprotein translocase subunit MADE_RS13285 PF01702 Queuine tRNA-ribosyltransferase MADE_RS13290 PF02547 Queuosine biosynthesis protein MADE_RS13305 PF04012 PspA/IM30 family MADE_RS13310 PF07885 Ion channel MADE_RS13325 PF06693 Protein of unknown function (DUF1190) MADE_RS13330 PF03738 Glutathionylspermidine synthase preATP-grasp MADE_RS13345 PF00005 ABC transporter MADE_RS13360 PF04960 Glutaminase MADE_RS13365 PF00245 Alkaline phosphatase MADE_RS13370 PF00072 Response regulator receiver domain MADE_RS13375 PF00463 Isocitrate lyase family MADE_RS13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS13380 PF03466 LysR substrate binding domain MADE_RS13385 PF01274 Malate synthase MADE_RS13395 PF01370 NAD dependent epimerase/dehydratase family MADE_RS13400 PF01565 FAD binding domain MADE_RS13400 PF02913 FAD linked oxidases, C-terminal domain MADE_RS13480 PF13537 Glutamine amidotransferase domain MADE_RS13480 PF00733 Asparagine synthase MADE_RS13500 PF13439 Glycosyltransferase Family 4 MADE_RS13500 PF00534 Glycosyl transferases group 1 MADE_RS13510 PF14667 Polysaccharide biosynthesis C-terminal domain MADE_RS13535 PF04138 GtrA-like protein MADE_RS13550 PF03050 Transposase IS66 family MADE_RS13550 PF13817 IS66 C-terminal element MADE_RS13550 PF13007 Transposase C of IS166 homeodomain MADE_RS13550 PF13005 zinc-finger binding domain of transposase IS66 MADE_RS13555 PF01757 Acyltransferase family MADE_RS13585 PF00535 Glycosyl transferase family 2 MADE_RS13595 PF01943 Polysaccharide biosynthesis protein MADE_RS13605 PF08889 WbqC-like protein family MADE_RS13610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MADE_RS13615 PF00535 Glycosyl transferase family 2 MADE_RS13620 PF05159 Capsule polysaccharide biosynthesis protein MADE_RS13630 PF13439 Glycosyltransferase Family 4 MADE_RS13630 PF00534 Glycosyl transferases group 1 MADE_RS13635 PF00535 Glycosyl transferase family 2 MADE_RS13660 PF00534 Glycosyl transferases group 1 MADE_RS13660 PF13439 Glycosyltransferase Family 4 MADE_RS13675 PF02397 Bacterial sugar transferase MADE_RS13690 PF13614 AAA domain MADE_RS13700 PF13401 AAA domain MADE_RS13700 PF01471 Putative peptidoglycan binding domain MADE_RS13710 PF01541 GIY-YIG catalytic domain MADE_RS13725 PF08335 GlnD PII-uridylyltransferase MADE_RS13725 PF03710 Glutamate-ammonia ligase adenylyltransferase MADE_RS13735 PF03279 Bacterial lipid A biosynthesis acyltransferase MADE_RS13750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS13750 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS13750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MADE_RS13750 PF09317 Domain of unknown function (DUF1974) MADE_RS13755 PF00593 TonB dependent receptor MADE_RS13755 PF07715 TonB-dependent Receptor Plug Domain MADE_RS13755 PF04886 PT repeat MADE_RS13770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MADE_RS13785 PF13188 PAS domain MADE_RS13785 PF03707 Bacterial signalling protein N terminal repeat MADE_RS13785 PF00563 EAL domain MADE_RS13785 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS13790 PF00265 Thymidine kinase MADE_RS13800 PF00356 Bacterial regulatory proteins, lacI family MADE_RS13835 PF01926 50S ribosome-binding GTPase MADE_RS13840 PF08032 RNA 2'-O ribose methyltransferase substrate binding MADE_RS13840 PF00588 SpoU rRNA Methylase family MADE_RS13845 PF00378 Enoyl-CoA hydratase/isomerase MADE_RS13845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MADE_RS13845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MADE_RS13860 PF00171 Aldehyde dehydrogenase family MADE_RS13865 PF00732 GMC oxidoreductase MADE_RS13865 PF05199 GMC oxidoreductase MADE_RS13880 PF05971 RNA methyltransferase MADE_RS13905 PF18158 Adaptive response protein AidB N-terminal domain MADE_RS13905 PF02770 Acyl-CoA dehydrogenase, middle domain MADE_RS13905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MADE_RS13930 PF00072 Response regulator receiver domain MADE_RS13930 PF00486 Transcriptional regulatory protein, C terminal MADE_RS13935 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS13935 PF16527 Two-component sensor protein CpxA, periplasmic domain MADE_RS13935 PF00672 HAMP domain MADE_RS13945 PF03965 Penicillinase repressor MADE_RS13965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MADE_RS13975 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS13975 PF01799 [2Fe-2S] binding domain MADE_RS13980 PF03450 CO dehydrogenase flavoprotein C-terminal domain MADE_RS13980 PF00941 FAD binding domain in molybdopterin dehydrogenase MADE_RS13985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MADE_RS13985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MADE_RS14010 PF00106 short chain dehydrogenase MADE_RS14015 PF01965 DJ-1/PfpI family MADE_RS14020 PF03631 Virulence factor BrkB MADE_RS14030 PF07152 YaeQ protein MADE_RS14060 PF07690 Major Facilitator Superfamily MADE_RS14075 PF09382 RQC domain MADE_RS14075 PF16124 RecQ zinc-binding MADE_RS14075 PF00570 HRDC domain MADE_RS14075 PF00270 DEAD/DEAH box helicase MADE_RS14075 PF00271 Helicase conserved C-terminal domain MADE_RS14095 PF00072 Response regulator receiver domain MADE_RS14095 PF01627 Hpt domain MADE_RS14095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS14095 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS14095 PF00672 HAMP domain MADE_RS14105 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS14105 PF00360 Phytochrome region MADE_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS14105 PF08446 PAS fold MADE_RS14105 PF01590 GAF domain MADE_RS14110 PF07995 Glucose / Sorbosone dehydrogenase MADE_RS14120 PF02492 CobW/HypB/UreG, nucleotide-binding domain MADE_RS14125 PF01730 UreF MADE_RS14130 PF02814 UreE urease accessory protein, N-terminal domain MADE_RS14130 PF05194 UreE urease accessory protein, C-terminal domain MADE_RS14135 PF01979 Amidohydrolase family MADE_RS14135 PF00449 Urease alpha-subunit, N-terminal domain MADE_RS14140 PF00699 Urease beta subunit MADE_RS14145 PF00547 Urease, gamma subunit MADE_RS14150 PF01774 UreD urease accessory protein MADE_RS14155 PF00005 ABC transporter MADE_RS14160 PF12399 Branched-chain amino acid ATP-binding cassette transporter MADE_RS14160 PF00005 ABC transporter MADE_RS14170 PF02653 Branched-chain amino acid transport system / permease component MADE_RS14185 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS14185 PF00072 Response regulator receiver domain MADE_RS14185 PF17149 Periplasmic sensor domain found in signal transduction proteins MADE_RS14185 PF00672 HAMP domain MADE_RS14185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS14185 PF01627 Hpt domain MADE_RS14190 PF00072 Response regulator receiver domain MADE_RS14190 PF00486 Transcriptional regulatory protein, C terminal MADE_RS14195 PF12728 Helix-turn-helix domain MADE_RS14195 PF02661 Fic/DOC family MADE_RS14200 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) MADE_RS14205 PF01867 CRISPR associated protein Cas1 MADE_RS14220 PF09704 CRISPR-associated protein (Cas_Cas5) MADE_RS14240 PF18019 HD domain MADE_RS14240 PF00271 Helicase conserved C-terminal domain MADE_RS14240 PF00270 DEAD/DEAH box helicase MADE_RS14250 PF02347 Glycine cleavage system P-protein MADE_RS14255 PF01597 Glycine cleavage H-protein MADE_RS14260 PF08669 Glycine cleavage T-protein C-terminal barrel domain MADE_RS14260 PF01571 Aminomethyltransferase folate-binding domain MADE_RS14265 PF01979 Amidohydrolase family MADE_RS14270 PF01869 BadF/BadG/BcrA/BcrD ATPase family MADE_RS14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS14275 PF03466 LysR substrate binding domain MADE_RS14280 PF02652 L-lactate permease MADE_RS14290 PF00557 Metallopeptidase family M24 MADE_RS14290 PF01321 Creatinase/Prolidase N-terminal domain MADE_RS14300 PF01494 FAD binding domain MADE_RS14305 PF01494 FAD binding domain MADE_RS14310 PF00557 Metallopeptidase family M24 MADE_RS14310 PF05195 Aminopeptidase P, N-terminal domain MADE_RS14315 PF03695 Uncharacterised protein family (UPF0149) MADE_RS14590 PF00476 DNA polymerase family A MADE_RS14590 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MADE_RS14590 PF01367 5'-3' exonuclease, C-terminal SAM fold MADE_RS14650 PF12167 Arm DNA-binding domain MADE_RS14650 PF00589 Phage integrase family MADE_RS14655 PF00294 pfkB family carbohydrate kinase MADE_RS14660 PF01156 Inosine-uridine preferring nucleoside hydrolase MADE_RS14665 PF00497 Bacterial extracellular solute-binding proteins, family 3 MADE_RS14665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS14665 PF01627 Hpt domain MADE_RS14665 PF00989 PAS fold MADE_RS14665 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS14665 PF00072 Response regulator receiver domain MADE_RS14670 PF01812 5-formyltetrahydrofolate cyclo-ligase family MADE_RS14675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MADE_RS14680 PF01842 ACT domain MADE_RS14680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MADE_RS14680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MADE_RS14700 PF06945 Protein of unknown function (DUF1289) MADE_RS14710 PF00873 AcrB/AcrD/AcrF family MADE_RS14715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MADE_RS14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS14720 PF03466 LysR substrate binding domain MADE_RS14735 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS14735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS14740 PF02817 e3 binding domain MADE_RS14740 PF00364 Biotin-requiring enzyme MADE_RS14740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MADE_RS14745 PF17831 Pyruvate dehydrogenase E1 component middle domain MADE_RS14745 PF00456 Transketolase, thiamine diphosphate binding domain MADE_RS14750 PF00392 Bacterial regulatory proteins, gntR family MADE_RS14750 PF07729 FCD domain MADE_RS14760 PF01510 N-acetylmuramoyl-L-alanine amidase MADE_RS14770 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MADE_RS14770 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MADE_RS14775 PF00114 Pilin (bacterial filament) MADE_RS14775 PF07963 Prokaryotic N-terminal methylation motif MADE_RS14780 PF00482 Type II secretion system (T2SS), protein F MADE_RS14785 PF01478 Type IV leader peptidase family MADE_RS14785 PF06750 Bacterial Peptidase A24 N-terminal domain MADE_RS14790 PF01121 Dephospho-CoA kinase MADE_RS14795 PF07072 Cell division protein MADE_RS14800 PF03884 DNA gyrase inhibitor YacG MADE_RS14805 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MADE_RS14810 PF02743 Cache domain MADE_RS14810 PF00672 HAMP domain MADE_RS14810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS14815 PF00072 Response regulator receiver domain MADE_RS14815 PF00196 Bacterial regulatory proteins, luxR family MADE_RS14820 PF13614 AAA domain MADE_RS14830 PF07194 P2 response regulator binding domain MADE_RS14830 PF01627 Hpt domain MADE_RS14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS14830 PF02895 Signal transducing histidine kinase, homodimeric domain MADE_RS14830 PF01584 CheW-like domain MADE_RS14835 PF00072 Response regulator receiver domain MADE_RS14840 PF03705 CheR methyltransferase, all-alpha domain MADE_RS14840 PF01739 CheR methyltransferase, SAM binding domain MADE_RS14850 PF01339 CheB methylesterase MADE_RS14850 PF00072 Response regulator receiver domain MADE_RS14855 PF01584 CheW-like domain MADE_RS14860 PF00672 HAMP domain MADE_RS14860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS14860 PF02743 Cache domain MADE_RS14865 PF00293 NUDIX domain MADE_RS14870 PF02810 SEC-C motif MADE_RS14870 PF07516 SecA Wing and Scaffold domain MADE_RS14870 PF01043 SecA preprotein cross-linking domain MADE_RS14870 PF07517 SecA DEAD-like domain MADE_RS14875 PF08525 Opacity-associated protein A N-terminal motif MADE_RS14875 PF01551 Peptidase family M23 MADE_RS14875 PF01476 LysM domain MADE_RS14880 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MADE_RS14885 PF00091 Tubulin/FtsZ family, GTPase domain MADE_RS14885 PF12327 FtsZ family, C-terminal domain MADE_RS14890 PF02491 SHS2 domain inserted in FTSA MADE_RS14895 PF08478 POTRA domain, FtsQ-type MADE_RS14895 PF03799 Cell division protein FtsQ MADE_RS14900 PF01820 D-ala D-ala ligase N-terminus MADE_RS14900 PF07478 D-ala D-ala ligase C-terminus MADE_RS14905 PF08245 Mur ligase middle domain MADE_RS14905 PF02875 Mur ligase family, glutamate ligase domain MADE_RS14905 PF01225 Mur ligase family, catalytic domain MADE_RS14910 PF04101 Glycosyltransferase family 28 C-terminal domain MADE_RS14910 PF03033 Glycosyltransferase family 28 N-terminal domain MADE_RS14915 PF01098 Cell cycle protein MADE_RS14920 PF08245 Mur ligase middle domain MADE_RS14920 PF02875 Mur ligase family, glutamate ligase domain MADE_RS14925 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MADE_RS14925 PF00953 Glycosyl transferase family 4 MADE_RS14930 PF01225 Mur ligase family, catalytic domain MADE_RS14930 PF02875 Mur ligase family, glutamate ligase domain MADE_RS14930 PF08245 Mur ligase middle domain MADE_RS14935 PF02875 Mur ligase family, glutamate ligase domain MADE_RS14935 PF01225 Mur ligase family, catalytic domain MADE_RS14935 PF08245 Mur ligase middle domain MADE_RS14940 PF03717 Penicillin-binding Protein dimerisation domain MADE_RS14940 PF00905 Penicillin binding protein transpeptidase domain MADE_RS14945 PF04999 Cell division protein FtsL MADE_RS14950 PF01795 MraW methylase family MADE_RS14955 PF02381 MraZ protein, putative antitoxin-like MADE_RS14995 PF08534 Redoxin MADE_RS14995 PF00462 Glutaredoxin MADE_RS15000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MADE_RS15010 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS15020 PF02954 Bacterial regulatory protein, Fis family MADE_RS15020 PF00072 Response regulator receiver domain MADE_RS15020 PF00158 Sigma-54 interaction domain MADE_RS15025 PF09456 RcsC Alpha-Beta-Loop (ABL) MADE_RS15025 PF00072 Response regulator receiver domain MADE_RS15025 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS15030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MADE_RS15030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MADE_RS15050 PF00924 Mechanosensitive ion channel MADE_RS15050 PF05552 Conserved TM helix MADE_RS15055 PF04452 RNA methyltransferase MADE_RS15060 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MADE_RS15060 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MADE_RS15065 PF02622 Uncharacterized ACR, COG1678 MADE_RS15070 PF03652 Holliday junction resolvase MADE_RS15080 PF00437 Type II/IV secretion system protein MADE_RS15085 PF00437 Type II/IV secretion system protein MADE_RS15090 PF01168 Alanine racemase, N-terminal domain MADE_RS15095 PF14748 Pyrroline-5-carboxylate reductase dimerisation MADE_RS15095 PF03807 NADP oxidoreductase coenzyme F420-dependent MADE_RS15100 PF02325 YGGT family MADE_RS15110 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS15110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MADE_RS15125 PF14834 Glutathione S-transferase, C-terminal domain MADE_RS15125 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS15130 PF00080 Copper/zinc superoxide dismutase (SODC) MADE_RS15135 PF02566 OsmC-like protein MADE_RS15140 PF01625 Peptide methionine sulfoxide reductase MADE_RS15155 PF03591 AzlC protein MADE_RS15165 PF07690 Major Facilitator Superfamily MADE_RS15170 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MADE_RS15175 PF03883 Peroxide stress protein YaaA MADE_RS15185 PF00923 Transaldolase/Fructose-6-phosphate aldolase MADE_RS15190 PF00342 Phosphoglucose isomerase MADE_RS15195 PF03167 Uracil DNA glycosylase superfamily MADE_RS15200 PF14821 Threonine synthase N terminus MADE_RS15200 PF00291 Pyridoxal-phosphate dependent enzyme MADE_RS15205 PF08544 GHMP kinases C terminal MADE_RS15205 PF00288 GHMP kinases N terminal domain MADE_RS15210 PF03447 Homoserine dehydrogenase, NAD binding domain MADE_RS15210 PF00742 Homoserine dehydrogenase MADE_RS15210 PF01842 ACT domain MADE_RS15210 PF13840 ACT domain MADE_RS15210 PF00696 Amino acid kinase family MADE_RS15215 PF17755 UvrA DNA-binding domain MADE_RS15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS15220 PF03466 LysR substrate binding domain MADE_RS15225 PF00107 Zinc-binding dehydrogenase MADE_RS15225 PF08240 Alcohol dehydrogenase GroES-like domain MADE_RS15235 PF01022 Bacterial regulatory protein, arsR family MADE_RS15245 PF03358 NADPH-dependent FMN reductase MADE_RS15250 PF01758 Sodium Bile acid symporter family MADE_RS15255 PF01339 CheB methylesterase MADE_RS15255 PF00072 Response regulator receiver domain MADE_RS15260 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MADE_RS15265 PF00486 Transcriptional regulatory protein, C terminal MADE_RS15265 PF00072 Response regulator receiver domain MADE_RS15270 PF00672 HAMP domain MADE_RS15270 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS15295 PF00962 Adenosine/AMP deaminase MADE_RS15300 PF04116 Fatty acid hydroxylase superfamily MADE_RS15320 PF03435 Saccharopine dehydrogenase NADP binding domain MADE_RS15320 PF16653 Saccharopine dehydrogenase C-terminal domain MADE_RS15325 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MADE_RS15335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MADE_RS15340 PF04348 LppC putative lipoprotein MADE_RS15345 PF02021 Uncharacterised protein family UPF0102 MADE_RS15350 PF00534 Glycosyl transferases group 1 MADE_RS15355 PF13580 SIS domain MADE_RS15360 PF04972 BON domain MADE_RS15365 PF07690 Major Facilitator Superfamily MADE_RS15375 PF00893 Small Multidrug Resistance protein MADE_RS15380 PF07730 Histidine kinase MADE_RS15385 PF00196 Bacterial regulatory proteins, luxR family MADE_RS15385 PF00072 Response regulator receiver domain MADE_RS15400 PF00593 TonB dependent receptor MADE_RS15400 PF07715 TonB-dependent Receptor Plug Domain MADE_RS15415 PF00285 Citrate synthase, C-terminal domain MADE_RS15420 PF00330 Aconitase family (aconitate hydratase) MADE_RS15420 PF00694 Aconitase C-terminal domain MADE_RS15425 PF04303 PrpF protein MADE_RS15430 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS15435 PF00480 ROK family MADE_RS15440 PF13660 Domain of unknown function (DUF4147) MADE_RS15440 PF05161 MOFRL family MADE_RS15445 PF00474 Sodium:solute symporter family MADE_RS15450 PF00593 TonB dependent receptor MADE_RS15450 PF07715 TonB-dependent Receptor Plug Domain MADE_RS15475 PF00072 Response regulator receiver domain MADE_RS15475 PF18415 Histidine kinase receptor ArcB trans-membrane domain MADE_RS15475 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS15475 PF01627 Hpt domain MADE_RS15475 PF00989 PAS fold MADE_RS15480 PF01510 N-acetylmuramoyl-L-alanine amidase MADE_RS15485 PF01493 GXGXG motif MADE_RS15485 PF00310 Glutamine amidotransferases class-II MADE_RS15485 PF01645 Conserved region in glutamate synthase MADE_RS15485 PF04898 Glutamate synthase central domain MADE_RS15490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MADE_RS15490 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS15505 PF01048 Phosphorylase superfamily MADE_RS15510 PF03186 CobD/Cbib protein MADE_RS15515 PF01497 Periplasmic binding protein MADE_RS15520 PF00581 Rhodanese-like domain MADE_RS15535 PF01266 FAD dependent oxidoreductase MADE_RS15540 PF00579 tRNA synthetases class I (W and Y) MADE_RS15550 PF01551 Peptidase family M23 MADE_RS15550 PF01476 LysM domain MADE_RS15555 PF03702 Anhydro-N-acetylmuramic acid kinase MADE_RS15560 PF07690 Major Facilitator Superfamily MADE_RS15570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MADE_RS15580 PF01053 Cys/Met metabolism PLP-dependent enzyme MADE_RS15585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MADE_RS15585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MADE_RS15590 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS15590 PF00043 Glutathione S-transferase, C-terminal domain MADE_RS15595 PF01521 Iron-sulphur cluster biosynthesis MADE_RS15605 PF03976 Polyphosphate kinase 2 (PPK2) MADE_RS15610 PF03776 Septum formation topological specificity factor MinE MADE_RS15615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MADE_RS15620 PF03775 Septum formation inhibitor MinC, C-terminal domain MADE_RS15620 PF05209 Septum formation inhibitor MinC, N-terminal domain MADE_RS15625 PF00206 Lyase MADE_RS15625 PF10415 Fumarase C C-terminus MADE_RS15630 PF00127 Copper binding proteins, plastocyanin/azurin family MADE_RS15645 PF03653 Uncharacterised protein family (UPF0093) MADE_RS15660 PF01566 Natural resistance-associated macrophage protein MADE_RS15665 PF00155 Aminotransferase class I and II MADE_RS15670 PF08448 PAS fold MADE_RS15670 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS15670 PF00072 Response regulator receiver domain MADE_RS15670 PF13188 PAS domain MADE_RS15675 PF00679 Elongation factor G C-terminus MADE_RS15675 PF03144 Elongation factor Tu domain 2 MADE_RS15675 PF00009 Elongation factor Tu GTP binding domain MADE_RS15680 PF00120 Glutamine synthetase, catalytic domain MADE_RS15680 PF03951 Glutamine synthetase, beta-Grasp domain MADE_RS15690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS15690 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS15690 PF00989 PAS fold MADE_RS15695 PF00072 Response regulator receiver domain MADE_RS15695 PF00158 Sigma-54 interaction domain MADE_RS15695 PF02954 Bacterial regulatory protein, Fis family MADE_RS15700 PF00072 Response regulator receiver domain MADE_RS15705 PF01553 Acyltransferase MADE_RS15710 PF06877 Regulator of ribonuclease activity B MADE_RS15720 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS15740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MADE_RS15740 PF01627 Hpt domain MADE_RS15740 PF00072 Response regulator receiver domain MADE_RS15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS15740 PF00672 HAMP domain MADE_RS15740 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS15745 PF08264 Anticodon-binding domain of tRNA MADE_RS15745 PF00133 tRNA synthetases class I (I, L, M and V) MADE_RS15745 PF10458 Valyl tRNA synthetase tRNA binding arm MADE_RS15750 PF04364 DNA polymerase III chi subunit, HolC MADE_RS15755 PF00883 Cytosol aminopeptidase family, catalytic domain MADE_RS15755 PF02789 Cytosol aminopeptidase family, N-terminal domain MADE_RS15760 PF03739 Lipopolysaccharide export system permease LptF/LptG MADE_RS15765 PF03739 Lipopolysaccharide export system permease LptF/LptG MADE_RS15780 PF04542 Sigma-70 region 2 MADE_RS15780 PF04545 Sigma-70, region 4 MADE_RS15855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MADE_RS15855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MADE_RS15865 PF00128 Alpha amylase, catalytic domain MADE_RS15865 PF11941 Domain of unknown function (DUF3459) MADE_RS15890 PF03150 Di-haem cytochrome c peroxidase MADE_RS15895 PF07715 TonB-dependent Receptor Plug Domain MADE_RS15910 PF02371 Transposase IS116/IS110/IS902 family MADE_RS15910 PF01548 Transposase MADE_RS15940 PF00005 ABC transporter MADE_RS15945 PF01032 FecCD transport family MADE_RS15950 PF01497 Periplasmic binding protein MADE_RS15960 PF07715 TonB-dependent Receptor Plug Domain MADE_RS15960 PF00593 TonB dependent receptor MADE_RS15970 PF00230 Major intrinsic protein MADE_RS15975 PF00892 EamA-like transporter family MADE_RS15990 PF00593 TonB dependent receptor MADE_RS15990 PF07715 TonB-dependent Receptor Plug Domain MADE_RS16005 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MADE_RS16005 PF00753 Metallo-beta-lactamase superfamily MADE_RS16005 PF10996 Beta-Casp domain MADE_RS16010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MADE_RS16015 PF01321 Creatinase/Prolidase N-terminal domain MADE_RS16015 PF00557 Metallopeptidase family M24 MADE_RS16020 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MADE_RS16020 PF05221 S-adenosyl-L-homocysteine hydrolase MADE_RS16030 PF13737 Transposase DDE domain MADE_RS16035 PF00196 Bacterial regulatory proteins, luxR family MADE_RS16035 PF00072 Response regulator receiver domain MADE_RS16040 PF05231 MASE1 MADE_RS16040 PF07730 Histidine kinase MADE_RS16040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS16045 PF03466 LysR substrate binding domain MADE_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS16050 PF00171 Aldehyde dehydrogenase family MADE_RS16055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MADE_RS16055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MADE_RS16060 PF02028 BCCT, betaine/carnitine/choline family transporter MADE_RS16065 PF09330 D-lactate dehydrogenase, membrane binding MADE_RS16065 PF01565 FAD binding domain MADE_RS16070 PF00196 Bacterial regulatory proteins, luxR family MADE_RS16075 PF03783 Curli production assembly/transport component CsgG MADE_RS16100 PF00082 Subtilase family MADE_RS16105 PF00196 Bacterial regulatory proteins, luxR family MADE_RS16105 PF00072 Response regulator receiver domain MADE_RS16120 PF00270 DEAD/DEAH box helicase MADE_RS16120 PF00271 Helicase conserved C-terminal domain MADE_RS16140 PF01081 KDPG and KHG aldolase MADE_RS16145 PF00294 pfkB family carbohydrate kinase MADE_RS16180 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system MADE_RS16195 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS16195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS16210 PF00115 Cytochrome C and Quinol oxidase polypeptide I MADE_RS16215 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MADE_RS16215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MADE_RS16215 PF00034 Cytochrome c MADE_RS16235 PF00294 pfkB family carbohydrate kinase MADE_RS16245 PF07729 FCD domain MADE_RS16245 PF00392 Bacterial regulatory proteins, gntR family MADE_RS16250 PF00924 Mechanosensitive ion channel MADE_RS16250 PF12794 Mechanosensitive ion channel inner membrane domain 1 MADE_RS16250 PF12795 Mechanosensitive ion channel porin domain MADE_RS16260 PF00141 Peroxidase MADE_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS16280 PF03466 LysR substrate binding domain MADE_RS16290 PF01925 Sulfite exporter TauE/SafE MADE_RS16295 PF00155 Aminotransferase class I and II MADE_RS16300 PF08769 Sporulation initiation factor Spo0A C terminal MADE_RS16300 PF00072 Response regulator receiver domain MADE_RS16310 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS16320 PF03104 DNA polymerase family B, exonuclease domain MADE_RS16320 PF00136 DNA polymerase family B MADE_RS16330 PF13193 AMP-binding enzyme C-terminal domain MADE_RS16330 PF00501 AMP-binding enzyme MADE_RS16370 PF05958 tRNA (Uracil-5-)-methyltransferase MADE_RS16375 PF00440 Bacterial regulatory proteins, tetR family MADE_RS16385 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS16385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS16395 PF03167 Uracil DNA glycosylase superfamily MADE_RS16400 PF03707 Bacterial signalling protein N terminal repeat MADE_RS16400 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS16400 PF00563 EAL domain MADE_RS16410 PF01507 Phosphoadenosine phosphosulfate reductase family MADE_RS16415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MADE_RS16415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MADE_RS16420 PF00175 Oxidoreductase NAD-binding domain MADE_RS16420 PF00258 Flavodoxin MADE_RS16420 PF00667 FAD binding domain MADE_RS16440 PF04024 PspC domain MADE_RS16445 PF04012 PspA/IM30 family MADE_RS16455 PF01207 Dihydrouridine synthase (Dus) MADE_RS16460 PF00589 Phage integrase family MADE_RS16470 PF03050 Transposase IS66 family MADE_RS16470 PF13005 zinc-finger binding domain of transposase IS66 MADE_RS16470 PF13817 IS66 C-terminal element MADE_RS16470 PF13007 Transposase C of IS166 homeodomain MADE_RS16520 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MADE_RS16520 PF04851 Type III restriction enzyme, res subunit MADE_RS16520 PF08463 EcoEI R protein C-terminal MADE_RS16520 PF00271 Helicase conserved C-terminal domain MADE_RS16530 PF12161 HsdM N-terminal domain MADE_RS16530 PF02384 N-6 DNA Methylase MADE_RS16595 PF00691 OmpA family MADE_RS16595 PF01389 OmpA-like transmembrane domain MADE_RS16600 PF05362 Lon protease (S16) C-terminal proteolytic domain MADE_RS16600 PF02190 ATP-dependent protease La (LON) substrate-binding domain MADE_RS16600 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS16605 PF00563 EAL domain MADE_RS16605 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS16605 PF03707 Bacterial signalling protein N terminal repeat MADE_RS16610 PF00756 Putative esterase MADE_RS16615 PF01553 Acyltransferase MADE_RS16620 PF01553 Acyltransferase MADE_RS16625 PF00924 Mechanosensitive ion channel MADE_RS16640 PF01370 NAD dependent epimerase/dehydratase family MADE_RS16645 PF00209 Sodium:neurotransmitter symporter family MADE_RS16650 PF00106 short chain dehydrogenase MADE_RS16660 PF01625 Peptide methionine sulfoxide reductase MADE_RS16675 PF00258 Flavodoxin MADE_RS16685 PF02472 Biopolymer transport protein ExbD/TolR MADE_RS16700 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MADE_RS16700 PF13181 Tetratricopeptide repeat MADE_RS16705 PF01270 Glycosyl hydrolases family 8 MADE_RS16715 PF00535 Glycosyl transferase family 2 MADE_RS16715 PF07238 PilZ domain MADE_RS16715 PF03552 Cellulose synthase MADE_RS16730 PF05175 Methyltransferase small domain MADE_RS16735 PF13460 NAD(P)H-binding MADE_RS16740 PF00326 Prolyl oligopeptidase family MADE_RS16740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region MADE_RS16745 PF08000 Bacterial PH domain MADE_RS16750 PF00563 EAL domain MADE_RS16750 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS16750 PF08448 PAS fold MADE_RS16755 PF00291 Pyridoxal-phosphate dependent enzyme MADE_RS16760 PF07969 Amidohydrolase family MADE_RS16770 PF00753 Metallo-beta-lactamase superfamily MADE_RS16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS16780 PF03466 LysR substrate binding domain MADE_RS16785 PF13230 Glutamine amidotransferases class-II MADE_RS16790 PF05360 yiaA/B two helix domain MADE_RS16810 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MADE_RS16815 PF00593 TonB dependent receptor MADE_RS16815 PF07715 TonB-dependent Receptor Plug Domain MADE_RS16820 PF00171 Aldehyde dehydrogenase family MADE_RS16825 PF01613 Flavin reductase like domain MADE_RS16830 PF00881 Nitroreductase family MADE_RS16835 PF00561 alpha/beta hydrolase fold MADE_RS16840 PF01042 Endoribonuclease L-PSP MADE_RS16845 PF00857 Isochorismatase family MADE_RS16850 PF00296 Luciferase-like monooxygenase MADE_RS16855 PF08362 YcdC-like protein, C-terminal region MADE_RS16855 PF00440 Bacterial regulatory proteins, tetR family MADE_RS16870 PF09905 DNA-binding protein VF530 MADE_RS16875 PF00753 Metallo-beta-lactamase superfamily MADE_RS16875 PF16123 Hydroxyacylglutathione hydrolase C-terminus MADE_RS16885 PF11799 impB/mucB/samB family C-terminal domain MADE_RS16885 PF11798 IMS family HHH motif MADE_RS16885 PF00817 impB/mucB/samB family MADE_RS16895 PF02424 ApbE family MADE_RS16900 PF00970 Oxidoreductase FAD-binding domain MADE_RS16900 PF00111 2Fe-2S iron-sulfur cluster binding domain MADE_RS16900 PF00175 Oxidoreductase NAD-binding domain MADE_RS16905 PF02508 Rnf-Nqr subunit, membrane protein MADE_RS16910 PF02508 Rnf-Nqr subunit, membrane protein MADE_RS16915 PF04205 FMN-binding domain MADE_RS16920 PF03116 NQR2, RnfD, RnfE family MADE_RS16925 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MADE_RS16925 PF11973 NQRA C-terminal domain MADE_RS16930 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MADE_RS16930 PF12241 Trans-2-enoyl-CoA reductase catalytic region MADE_RS16930 PF07055 Enoyl reductase FAD binding domain MADE_RS16935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MADE_RS16935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MADE_RS16940 PF00311 Phosphoenolpyruvate carboxylase MADE_RS16955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MADE_RS16955 PF00056 lactate/malate dehydrogenase, NAD binding domain MADE_RS16960 PF02863 Arginine repressor, C-terminal domain MADE_RS16960 PF01316 Arginine repressor, DNA binding domain MADE_RS16985 PF00485 Phosphoribulokinase / Uridine kinase family MADE_RS16990 PF07670 Nucleoside recognition MADE_RS16990 PF07662 Na+ dependent nucleoside transporter C-terminus MADE_RS16990 PF01773 Na+ dependent nucleoside transporter N-terminus MADE_RS17010 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS17010 PF00072 Response regulator receiver domain MADE_RS17015 PF14579 Helix-hairpin-helix motif MADE_RS17015 PF07733 Bacterial DNA polymerase III alpha NTPase domain MADE_RS17015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MADE_RS17015 PF02811 PHP domain MADE_RS17015 PF00929 Exonuclease MADE_RS17020 PF00571 CBS domain MADE_RS17025 PF00474 Sodium:solute symporter family MADE_RS17035 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS17035 PF07689 KaiB domain MADE_RS17045 PF08443 RimK-like ATP-grasp domain MADE_RS17045 PF18030 RimK PreATP-grasp domain MADE_RS17055 PF08443 RimK-like ATP-grasp domain MADE_RS17055 PF18030 RimK PreATP-grasp domain MADE_RS17065 PF00196 Bacterial regulatory proteins, luxR family MADE_RS17065 PF00072 Response regulator receiver domain MADE_RS17070 PF16177 Acetyl-coenzyme A synthetase N-terminus MADE_RS17070 PF00501 AMP-binding enzyme MADE_RS17070 PF13193 AMP-binding enzyme C-terminal domain MADE_RS17080 PF02690 Na+/Pi-cotransporter MADE_RS17085 PF00248 Aldo/keto reductase family MADE_RS17100 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS17100 PF00563 EAL domain MADE_RS17100 PF08447 PAS fold MADE_RS17100 PF08448 PAS fold MADE_RS17110 PF03144 Elongation factor Tu domain 2 MADE_RS17110 PF03143 Elongation factor Tu C-terminal domain MADE_RS17110 PF00009 Elongation factor Tu GTP binding domain MADE_RS17135 PF03309 Type III pantothenate kinase MADE_RS17140 PF08279 HTH domain MADE_RS17140 PF03099 Biotin/lipoate A/B protein ligase family MADE_RS17140 PF02237 Biotin protein ligase C terminal domain MADE_RS17145 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MADE_RS17145 PF01565 FAD binding domain MADE_RS17150 PF00672 HAMP domain MADE_RS17150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS17150 PF12729 Four helix bundle sensory module for signal transduction MADE_RS17195 PF03412 Peptidase C39 family MADE_RS17195 PF00005 ABC transporter MADE_RS17195 PF00664 ABC transporter transmembrane region MADE_RS17200 PF03466 LysR substrate binding domain MADE_RS17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS17215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MADE_RS17215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MADE_RS17215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MADE_RS17220 PF16363 GDP-mannose 4,6 dehydratase MADE_RS17225 PF04321 RmlD substrate binding domain MADE_RS17230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MADE_RS17235 PF00483 Nucleotidyl transferase MADE_RS17245 PF02709 N-terminal domain of galactosyltransferase MADE_RS17245 PF00535 Glycosyl transferase family 2 MADE_RS17275 PF13276 HTH-like domain MADE_RS17275 PF13683 Integrase core domain MADE_RS17310 PF00884 Sulfatase MADE_RS17310 PF16385 Domain of unknown function MADE_RS17325 PF00535 Glycosyl transferase family 2 MADE_RS17330 PF00483 Nucleotidyl transferase MADE_RS17330 PF01050 Mannose-6-phosphate isomerase MADE_RS17335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MADE_RS17335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MADE_RS17335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MADE_RS17335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MADE_RS17340 PF00700 Bacterial flagellin C-terminal helical region MADE_RS17340 PF00669 Bacterial flagellin N-terminal helical region MADE_RS17345 PF01196 Ribosomal protein L17 MADE_RS17350 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MADE_RS17350 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MADE_RS17350 PF01000 RNA polymerase Rpb3/RpoA insert domain MADE_RS17355 PF00163 Ribosomal protein S4/S9 N-terminal domain MADE_RS17355 PF01479 S4 domain MADE_RS17360 PF00411 Ribosomal protein S11 MADE_RS17365 PF00416 Ribosomal protein S13/S18 MADE_RS17370 PF00444 Ribosomal protein L36 MADE_RS17375 PF00344 SecY translocase MADE_RS17380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MADE_RS17385 PF00327 Ribosomal protein L30p/L7e MADE_RS17390 PF00333 Ribosomal protein S5, N-terminal domain MADE_RS17390 PF03719 Ribosomal protein S5, C-terminal domain MADE_RS17395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MADE_RS17400 PF00347 Ribosomal protein L6 MADE_RS17405 PF00410 Ribosomal protein S8 MADE_RS17410 PF00253 Ribosomal protein S14p/S29e MADE_RS17415 PF00281 Ribosomal protein L5 MADE_RS17415 PF00673 ribosomal L5P family C-terminus MADE_RS17420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MADE_RS17420 PF00467 KOW motif MADE_RS17425 PF00238 Ribosomal protein L14p/L23e MADE_RS17445 PF05922 Peptidase inhibitor I9 MADE_RS17445 PF00082 Subtilase family MADE_RS17455 PF00588 SpoU rRNA Methylase family MADE_RS17455 PF08032 RNA 2'-O ribose methyltransferase substrate binding MADE_RS17460 PF00773 RNB domain MADE_RS17460 PF08206 Ribonuclease B OB domain MADE_RS17460 PF08461 Ribonuclease R winged-helix domain MADE_RS17460 PF17876 Cold shock domain MADE_RS17460 PF00575 S1 RNA binding domain MADE_RS17475 PF09423 PhoD-like phosphatase MADE_RS17475 PF16655 PhoD-like phosphatase, N-terminal domain MADE_RS17490 PF00593 TonB dependent receptor MADE_RS17490 PF07715 TonB-dependent Receptor Plug Domain MADE_RS17505 PF08238 Sel1 repeat MADE_RS17515 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MADE_RS17520 PF00175 Oxidoreductase NAD-binding domain MADE_RS17535 PF04389 Peptidase family M28 MADE_RS17545 PF08446 PAS fold MADE_RS17545 PF00360 Phytochrome region MADE_RS17545 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS17545 PF01590 GAF domain MADE_RS17555 PF01654 Cytochrome bd terminal oxidase subunit I MADE_RS17560 PF02322 Cytochrome bd terminal oxidase subunit II MADE_RS17565 PF01037 Lrp/AsnC ligand binding domain MADE_RS17565 PF13404 AsnC-type helix-turn-helix domain MADE_RS17575 PF00313 'Cold-shock' DNA-binding domain MADE_RS17580 PF03109 ABC1 family MADE_RS17590 PF01209 ubiE/COQ5 methyltransferase family MADE_RS17600 PF01432 Peptidase family M3 MADE_RS17605 PF00072 Response regulator receiver domain MADE_RS17605 PF08769 Sporulation initiation factor Spo0A C terminal MADE_RS17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS17615 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS17615 PF00989 PAS fold MADE_RS17620 PF00072 Response regulator receiver domain MADE_RS17620 PF00158 Sigma-54 interaction domain MADE_RS17620 PF02954 Bacterial regulatory protein, Fis family MADE_RS17625 PF07992 Pyridine nucleotide-disulphide oxidoreductase MADE_RS17625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MADE_RS17630 PF10518 TAT (twin-arginine translocation) pathway signal sequence MADE_RS17630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MADE_RS17630 PF01568 Molydopterin dinucleotide binding domain MADE_RS17630 PF00384 Molybdopterin oxidoreductase MADE_RS17635 PF00326 Prolyl oligopeptidase family MADE_RS17635 PF07676 WD40-like Beta Propeller Repeat MADE_RS17685 PF00005 ABC transporter MADE_RS17685 PF00664 ABC transporter transmembrane region MADE_RS17685 PF03412 Peptidase C39 family MADE_RS17690 PF00072 Response regulator receiver domain MADE_RS17690 PF00196 Bacterial regulatory proteins, luxR family MADE_RS17700 PF18030 RimK PreATP-grasp domain MADE_RS17700 PF08443 RimK-like ATP-grasp domain MADE_RS17710 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system MADE_RS17715 PF00004 ATPase family associated with various cellular activities (AAA) MADE_RS17715 PF07724 AAA domain (Cdc48 subfamily) MADE_RS17720 PF00227 Proteasome subunit MADE_RS17725 PF05036 Sporulation related domain MADE_RS17730 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MADE_RS17730 PF00270 DEAD/DEAH box helicase MADE_RS17730 PF00271 Helicase conserved C-terminal domain MADE_RS17730 PF17764 3′ DNA-binding domain (3′BD) MADE_RS17730 PF18074 Primosomal protein N C-terminal domain MADE_RS17735 PF01197 Ribosomal protein L31 MADE_RS17745 PF03949 Malic enzyme, NAD binding domain MADE_RS17745 PF00390 Malic enzyme, N-terminal domain MADE_RS17750 PF01340 Met Apo-repressor, MetJ MADE_RS17755 PF02219 Methylenetetrahydrofolate reductase MADE_RS17760 PF03631 Virulence factor BrkB MADE_RS17775 PF00561 alpha/beta hydrolase fold MADE_RS17780 PF02580 D-Tyr-tRNA(Tyr) deacylase MADE_RS17785 PF00583 Acetyltransferase (GNAT) family MADE_RS17785 PF09500 Putative thioesterase (yiiD_Cterm) MADE_RS17790 PF00140 Sigma-70 factor, region 1.2 MADE_RS17790 PF04542 Sigma-70 region 2 MADE_RS17790 PF04545 Sigma-70, region 4 MADE_RS17795 PF08668 HDOD domain MADE_RS17795 PF00563 EAL domain MADE_RS17800 PF00563 EAL domain MADE_RS17800 PF08668 HDOD domain MADE_RS17805 PF18075 FtsX extracellular domain MADE_RS17810 PF00005 ABC transporter MADE_RS17815 PF02881 SRP54-type protein, helical bundle domain MADE_RS17815 PF00448 SRP54-type protein, GTPase domain MADE_RS17830 PF01914 MarC family integral membrane protein MADE_RS17840 PF12404 Peptidase MADE_RS17840 PF00883 Cytosol aminopeptidase family, catalytic domain MADE_RS17845 PF03749 Sugar fermentation stimulation protein RE domain MADE_RS17845 PF17746 SfsA N-terminal OB domain MADE_RS17850 PF01258 Prokaryotic dksA/traR C4-type zinc finger MADE_RS17855 PF00749 tRNA synthetases class I (E and Q), catalytic domain MADE_RS17860 PF01743 Poly A polymerase head domain MADE_RS17860 PF12627 Probable RNA and SrmB- binding site of polymerase A MADE_RS17860 PF12626 Polymerase A arginine-rich C-terminus MADE_RS17865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MADE_RS17870 PF02548 Ketopantoate hydroxymethyltransferase MADE_RS17875 PF02569 Pantoate-beta-alanine ligase MADE_RS17880 PF00282 Pyridoxal-dependent decarboxylase conserved domain MADE_RS17895 PF01061 ABC-2 type transporter MADE_RS17900 PF00005 ABC transporter MADE_RS17905 PF00072 Response regulator receiver domain MADE_RS17905 PF00486 Transcriptional regulatory protein, C terminal MADE_RS17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS17910 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS17910 PF00672 HAMP domain MADE_RS17915 PF00593 TonB dependent receptor MADE_RS17915 PF07715 TonB-dependent Receptor Plug Domain MADE_RS17920 PF18331 PKHD-type hydroxylase C-terminal domain MADE_RS17920 PF13640 2OG-Fe(II) oxygenase superfamily MADE_RS17935 PF00571 CBS domain MADE_RS17935 PF01595 Cyclin M transmembrane N-terminal domain MADE_RS17945 PF02554 Carbon starvation protein CstA MADE_RS17945 PF13722 5TM C-terminal transporter carbon starvation CstA MADE_RS17955 PF07859 alpha/beta hydrolase fold MADE_RS17965 PF00009 Elongation factor Tu GTP binding domain MADE_RS17965 PF03144 Elongation factor Tu domain 2 MADE_RS17965 PF03143 Elongation factor Tu C-terminal domain MADE_RS17970 PF03764 Elongation factor G, domain IV MADE_RS17970 PF00009 Elongation factor Tu GTP binding domain MADE_RS17970 PF03144 Elongation factor Tu domain 2 MADE_RS17970 PF00679 Elongation factor G C-terminus MADE_RS17970 PF14492 Elongation Factor G, domain II MADE_RS17975 PF00177 Ribosomal protein S7p/S5e MADE_RS17980 PF00164 Ribosomal protein S12/S23 MADE_RS17985 PF04998 RNA polymerase Rpb1, domain 5 MADE_RS17985 PF05000 RNA polymerase Rpb1, domain 4 MADE_RS17985 PF04983 RNA polymerase Rpb1, domain 3 MADE_RS17985 PF04997 RNA polymerase Rpb1, domain 1 MADE_RS17985 PF00623 RNA polymerase Rpb1, domain 2 MADE_RS17990 PF00562 RNA polymerase Rpb2, domain 6 MADE_RS17990 PF04560 RNA polymerase Rpb2, domain 7 MADE_RS17990 PF04565 RNA polymerase Rpb2, domain 3 MADE_RS17990 PF04561 RNA polymerase Rpb2, domain 2 MADE_RS17990 PF04563 RNA polymerase beta subunit MADE_RS17990 PF10385 RNA polymerase beta subunit external 1 domain MADE_RS17995 PF00542 Ribosomal protein L7/L12 C-terminal domain MADE_RS17995 PF16320 Ribosomal protein L7/L12 dimerisation domain MADE_RS18000 PF00466 Ribosomal protein L10 MADE_RS18005 PF00687 Ribosomal protein L1p/L10e family MADE_RS18010 PF00298 Ribosomal protein L11, RNA binding domain MADE_RS18010 PF03946 Ribosomal protein L11, N-terminal domain MADE_RS18030 PF02357 Transcription termination factor nusG MADE_RS18030 PF00467 KOW motif MADE_RS18035 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MADE_RS18045 PF00664 ABC transporter transmembrane region MADE_RS18045 PF00005 ABC transporter MADE_RS18050 PF03737 Aldolase/RraA MADE_RS18055 PF01431 Peptidase family M13 MADE_RS18055 PF05649 Peptidase family M13 MADE_RS18065 PF00271 Helicase conserved C-terminal domain MADE_RS18065 PF00270 DEAD/DEAH box helicase MADE_RS18065 PF03880 DbpA RNA binding domain MADE_RS18070 PF01979 Amidohydrolase family MADE_RS18075 PF08212 Lipocalin-like domain MADE_RS18080 PF00248 Aldo/keto reductase family MADE_RS18085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MADE_RS18090 PF00924 Mechanosensitive ion channel MADE_RS18090 PF05552 Conserved TM helix MADE_RS18095 PF07690 Major Facilitator Superfamily MADE_RS18100 PF00128 Alpha amylase, catalytic domain MADE_RS18110 PF01227 GTP cyclohydrolase I MADE_RS18120 PF04371 Porphyromonas-type peptidyl-arginine deiminase MADE_RS18125 PF00795 Carbon-nitrogen hydrolase MADE_RS18135 PF00271 Helicase conserved C-terminal domain MADE_RS18135 PF00270 DEAD/DEAH box helicase MADE_RS18135 PF08494 DEAD/H associated MADE_RS18145 PF04675 DNA ligase N terminus MADE_RS18145 PF01068 ATP dependent DNA ligase domain MADE_RS18145 PF04679 ATP dependent DNA ligase C terminal region MADE_RS18150 PF09285 Elongation factor P, C-terminal MADE_RS18150 PF08207 Elongation factor P (EF-P) KOW-like domain MADE_RS18150 PF01132 Elongation factor P (EF-P) OB domain MADE_RS18155 PF00294 pfkB family carbohydrate kinase MADE_RS18165 PF02607 B12 binding domain MADE_RS18165 PF00809 Pterin binding enzyme MADE_RS18165 PF02310 B12 binding domain MADE_RS18165 PF02965 Vitamin B12 dependent methionine synthase, activation domain MADE_RS18165 PF02574 Homocysteine S-methyltransferase MADE_RS18170 PF00043 Glutathione S-transferase, C-terminal domain MADE_RS18170 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS18175 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS18185 PF00561 alpha/beta hydrolase fold MADE_RS18200 PF00171 Aldehyde dehydrogenase family MADE_RS18205 PF00205 Thiamine pyrophosphate enzyme, central domain MADE_RS18205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MADE_RS18205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MADE_RS18215 PF00762 Ferrochelatase MADE_RS18220 PF03806 AbgT putative transporter family MADE_RS18225 PF01145 SPFH domain / Band 7 family MADE_RS18230 PF12221 Bacterial membrane protein N terminal MADE_RS18230 PF01145 SPFH domain / Band 7 family MADE_RS18235 PF16360 GTP-binding GTPase Middle Region MADE_RS18235 PF01926 50S ribosome-binding GTPase MADE_RS18235 PF13167 GTP-binding GTPase N-terminal MADE_RS18240 PF17209 Hfq protein MADE_RS18250 PF01119 DNA mismatch repair protein, C-terminal domain MADE_RS18250 PF08676 MutL C terminal dimerisation domain MADE_RS18255 PF01520 N-acetylmuramoyl-L-alanine amidase MADE_RS18260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MADE_RS18265 PF03853 YjeF-related protein N-terminus MADE_RS18265 PF01256 Carbohydrate kinase MADE_RS18270 PF08331 Domain of unknown function (DUF1730) MADE_RS18280 PF01208 Uroporphyrinogen decarboxylase (URO-D) MADE_RS18285 PF00293 NUDIX domain MADE_RS18285 PF09297 NADH pyrophosphatase zinc ribbon domain MADE_RS18290 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MADE_RS18295 PF01475 Ferric uptake regulator family MADE_RS18305 PF01894 Uncharacterised protein family UPF0047 MADE_RS18310 PF00691 OmpA family MADE_RS18310 PF05736 OprF membrane domain MADE_RS18315 PF00772 DnaB-like helicase N terminal domain MADE_RS18315 PF03796 DnaB-like helicase C terminal domain MADE_RS18340 PF03475 3-alpha domain MADE_RS18340 PF03473 MOSC domain MADE_RS18355 PF01281 Ribosomal protein L9, N-terminal domain MADE_RS18355 PF03948 Ribosomal protein L9, C-terminal domain MADE_RS18360 PF01084 Ribosomal protein S18 MADE_RS18365 PF01250 Ribosomal protein S6 MADE_RS18370 PF07689 KaiB domain MADE_RS18370 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS18380 PF00005 ABC transporter MADE_RS18380 PF12704 MacB-like periplasmic core domain MADE_RS18380 PF02687 FtsX-like permease family MADE_RS18390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS18390 PF08447 PAS fold MADE_RS18395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS18395 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS18395 PF00989 PAS fold MADE_RS18395 PF13188 PAS domain MADE_RS18395 PF13426 PAS domain MADE_RS18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MADE_RS18400 PF02743 Cache domain MADE_RS18400 PF00672 HAMP domain MADE_RS18410 PF16916 Dimerisation domain of Zinc Transporter MADE_RS18410 PF01545 Cation efflux family MADE_RS18415 PF00722 Glycosyl hydrolases family 16 MADE_RS18425 PF03553 Na+/H+ antiporter family MADE_RS18430 PF14310 Fibronectin type III-like domain MADE_RS18430 PF01915 Glycosyl hydrolase family 3 C-terminal domain MADE_RS18430 PF00933 Glycosyl hydrolase family 3 N terminal domain MADE_RS18435 PF07690 Major Facilitator Superfamily MADE_RS18440 PF00232 Glycosyl hydrolase family 1 MADE_RS18445 PF00356 Bacterial regulatory proteins, lacI family MADE_RS18450 PF00083 Sugar (and other) transporter MADE_RS18455 PF00664 ABC transporter transmembrane region MADE_RS18455 PF00005 ABC transporter MADE_RS18460 PF00664 ABC transporter transmembrane region MADE_RS18460 PF00005 ABC transporter MADE_RS18470 PF02322 Cytochrome bd terminal oxidase subunit II MADE_RS18475 PF01654 Cytochrome bd terminal oxidase subunit I MADE_RS18485 PF02954 Bacterial regulatory protein, Fis family MADE_RS18485 PF06490 Flagellar regulatory protein FleQ MADE_RS18485 PF00158 Sigma-54 interaction domain MADE_RS18510 PF13474 SnoaL-like domain MADE_RS18520 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS18520 PF17151 Periplasmic sensor domain MADE_RS18530 PF08021 Siderophore-interacting FAD-binding domain MADE_RS18530 PF04954 Siderophore-interacting protein MADE_RS18535 PF05532 CsbD-like MADE_RS18555 PF00472 RF-1 domain MADE_RS18580 PF01292 Prokaryotic cytochrome b561 MADE_RS18585 PF04264 YceI-like domain MADE_RS18595 PF00593 TonB dependent receptor MADE_RS18595 PF07715 TonB-dependent Receptor Plug Domain MADE_RS18610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MADE_RS18615 PF00107 Zinc-binding dehydrogenase MADE_RS18615 PF16884 N-terminal domain of oxidoreductase MADE_RS18620 PF01590 GAF domain MADE_RS18620 PF00990 Diguanylate cyclase, GGDEF domain MADE_RS18620 PF00563 EAL domain MADE_RS18620 PF00360 Phytochrome region MADE_RS18625 PF00072 Response regulator receiver domain MADE_RS18625 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS18625 PF09308 LuxQ, periplasmic MADE_RS18625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS18655 PF02665 Nitrate reductase gamma subunit MADE_RS18660 PF02613 Nitrate reductase delta subunit MADE_RS18670 PF14710 Respiratory nitrate reductase alpha N-terminal MADE_RS18670 PF00384 Molybdopterin oxidoreductase MADE_RS18670 PF01568 Molydopterin dinucleotide binding domain MADE_RS18675 PF00672 HAMP domain MADE_RS18675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS18675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MADE_RS18675 PF07730 Histidine kinase MADE_RS18680 PF00005 ABC transporter MADE_RS18680 PF03459 TOBE domain MADE_RS18685 PF00528 Binding-protein-dependent transport system inner membrane component MADE_RS18695 PF07690 Major Facilitator Superfamily MADE_RS18700 PF00196 Bacterial regulatory proteins, luxR family MADE_RS18700 PF00072 Response regulator receiver domain MADE_RS18705 PF03453 MoeA N-terminal region (domain I and II) MADE_RS18705 PF03454 MoeA C-terminal region (domain IV) MADE_RS18705 PF00994 Probable molybdopterin binding domain MADE_RS18710 PF04304 Protein of unknown function (DUF454) MADE_RS18720 PF02391 MoaE protein MADE_RS18725 PF02597 ThiS family MADE_RS18740 PF04055 Radical SAM superfamily MADE_RS18740 PF06463 Molybdenum Cofactor Synthesis C MADE_RS18750 PF00899 ThiF family MADE_RS18755 PF02036 SCP-2 sterol transfer family MADE_RS18760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MADE_RS18760 PF00205 Thiamine pyrophosphate enzyme, central domain MADE_RS18760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MADE_RS18765 PF01136 Peptidase family U32 MADE_RS18770 PF01136 Peptidase family U32 MADE_RS18780 PF01814 Hemerythrin HHE cation binding domain MADE_RS18780 PF04405 Domain of Unknown function (DUF542) MADE_RS18785 PF00158 Sigma-54 interaction domain MADE_RS18785 PF02954 Bacterial regulatory protein, Fis family MADE_RS18790 PF04247 Invasion gene expression up-regulator, SirB MADE_RS18800 PF07690 Major Facilitator Superfamily MADE_RS18810 PF00069 Protein kinase domain MADE_RS18820 PF00005 ABC transporter MADE_RS18840 PF01380 SIS domain MADE_RS18845 PF08220 DeoR-like helix-turn-helix domain MADE_RS18845 PF00455 DeoR C terminal sensor domain MADE_RS18850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MADE_RS18850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MADE_RS18855 PF12804 MobA-like NTP transferase domain MADE_RS18855 PF00132 Bacterial transferase hexapeptide (six repeats) MADE_RS18855 PF14602 Hexapeptide repeat of succinyl-transferase MADE_RS18865 PF00892 EamA-like transporter family MADE_RS18870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MADE_RS18870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MADE_RS18880 PF00144 Beta-lactamase MADE_RS18885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MADE_RS18885 PF17810 Arginine decarboxylase helical bundle domain MADE_RS18885 PF17944 Arginine decarboxylase C-terminal helical extension MADE_RS18895 PF02233 NAD(P) transhydrogenase beta subunit MADE_RS18900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MADE_RS18905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MADE_RS18905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MADE_RS18915 PF04820 Tryptophan halogenase MADE_RS18955 PF01040 UbiA prenyltransferase family MADE_RS18960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MADE_RS18965 PF00510 Cytochrome c oxidase subunit III MADE_RS18970 PF00115 Cytochrome C and Quinol oxidase polypeptide I MADE_RS18975 PF06481 COX Aromatic Rich Motif MADE_RS18975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MADE_RS18985 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin MADE_RS18990 PF01850 PIN domain MADE_RS19010 PF00118 TCP-1/cpn60 chaperonin family MADE_RS19015 PF00166 Chaperonin 10 Kd subunit MADE_RS19020 PF04186 FxsA cytoplasmic membrane protein MADE_RS19025 PF03091 CutA1 divalent ion tolerance protein MADE_RS19030 PF02683 Cytochrome C biogenesis protein transmembrane region MADE_RS19030 PF11412 Disulphide bond corrector protein DsbC MADE_RS19035 PF01551 Peptidase family M23 MADE_RS19040 PF01220 Dehydroquinase class II MADE_RS19045 PF00364 Biotin-requiring enzyme MADE_RS19050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MADE_RS19050 PF00289 Biotin carboxylase, N-terminal domain MADE_RS19050 PF02785 Biotin carboxylase C-terminal domain MADE_RS19075 PF02811 PHP domain MADE_RS19075 PF07733 Bacterial DNA polymerase III alpha NTPase domain MADE_RS19075 PF11490 DNA polymerase III polC-type N-terminus II MADE_RS19075 PF00929 Exonuclease MADE_RS19075 PF14579 Helix-hairpin-helix motif MADE_RS19075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MADE_RS19095 PF01355 High potential iron-sulfur protein MADE_RS19100 PF01425 Amidase MADE_RS19115 PF01207 Dihydrouridine synthase (Dus) MADE_RS19120 PF02954 Bacterial regulatory protein, Fis family MADE_RS19150 PF00027 Cyclic nucleotide-binding domain MADE_RS19150 PF00520 Ion transport protein MADE_RS19155 PF00485 Phosphoribulokinase / Uridine kinase family MADE_RS19165 PF00486 Transcriptional regulatory protein, C terminal MADE_RS19165 PF00072 Response regulator receiver domain MADE_RS19170 PF00512 His Kinase A (phospho-acceptor) domain MADE_RS19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MADE_RS19170 PF00672 HAMP domain MADE_RS19180 PF16338 Domain of unknown function (DUF4968) MADE_RS19180 PF17137 Domain of unknown function (DUF5110) MADE_RS19180 PF13802 Galactose mutarotase-like MADE_RS19180 PF01055 Glycosyl hydrolases family 31 MADE_RS19185 PF01293 Phosphoenolpyruvate carboxykinase MADE_RS19195 PF01430 Hsp33 protein MADE_RS19210 PF00263 Bacterial type II and III secretion system protein MADE_RS19210 PF03958 Bacterial type II/III secretion system short domain MADE_RS19215 PF00437 Type II/IV secretion system protein MADE_RS19220 PF00482 Type II secretion system (T2SS), protein F MADE_RS19225 PF07963 Prokaryotic N-terminal methylation motif MADE_RS19225 PF08334 Type II secretion system (T2SS), protein G MADE_RS19230 PF12019 Type II transport protein GspH MADE_RS19235 PF02501 Type II secretion system (T2SS), protein I MADE_RS19235 PF07963 Prokaryotic N-terminal methylation motif MADE_RS19240 PF11612 Type II secretion system (T2SS), protein J MADE_RS19240 PF07963 Prokaryotic N-terminal methylation motif MADE_RS19250 PF12693 GspL periplasmic domain MADE_RS19250 PF05134 Type II secretion system (T2SS), protein L MADE_RS19255 PF04612 Type II secretion system (T2SS), protein M MADE_RS19270 PF00171 Aldehyde dehydrogenase family MADE_RS19275 PF01931 Protein of unknown function DUF84 MADE_RS19280 PF13419 Haloacid dehalogenase-like hydrolase MADE_RS19285 PF00293 NUDIX domain MADE_RS19290 PF00459 Inositol monophosphatase family MADE_RS19300 PF00535 Glycosyl transferase family 2 MADE_RS19320 PF06794 Uncharacterised protein family (UPF0270) MADE_RS19325 PF00561 alpha/beta hydrolase fold MADE_RS19350 PF04102 SlyX MADE_RS19360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MADE_RS19360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MADE_RS19370 PF01272 Transcription elongation factor, GreA/GreB, C-term MADE_RS19370 PF03449 Transcription elongation factor, N-terminal MADE_RS19395 PF00561 alpha/beta hydrolase fold MADE_RS19400 PF00156 Phosphoribosyl transferase domain MADE_RS19410 PF01106 NifU-like domain MADE_RS19410 PF01521 Iron-sulphur cluster biosynthesis MADE_RS19420 PF01177 Asp/Glu/Hydantoin racemase MADE_RS19435 PF14883 Hypothetical glycosyl hydrolase family 13 MADE_RS19435 PF01522 Polysaccharide deacetylase MADE_RS19445 PF02630 SCO1/SenC MADE_RS19450 PF01040 UbiA prenyltransferase family MADE_RS19455 PF02628 Cytochrome oxidase assembly protein MADE_RS19480 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MADE_RS19485 PF00115 Cytochrome C and Quinol oxidase polypeptide I MADE_RS19490 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MADE_RS19490 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MADE_RS19495 PF00717 Peptidase S24-like MADE_RS19495 PF01726 LexA DNA binding domain MADE_RS19510 PF00920 Dehydratase family MADE_RS19520 PF03458 UPF0126 domain MADE_RS19525 PF13335 Magnesium chelatase, subunit ChlI C-terminal MADE_RS19525 PF01078 Magnesium chelatase, subunit ChlI MADE_RS19530 PF03466 LysR substrate binding domain MADE_RS19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MADE_RS19535 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MADE_RS19535 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MADE_RS19540 PF07690 Major Facilitator Superfamily MADE_RS19550 PF17243 POTRA domain TamA domain 1 MADE_RS19550 PF07244 Surface antigen variable number repeat MADE_RS19550 PF01103 Surface antigen MADE_RS19555 PF04357 TamB, inner membrane protein subunit of TAM complex MADE_RS19580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MADE_RS19580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MADE_RS19590 PF01472 PUA domain MADE_RS19590 PF00696 Amino acid kinase family MADE_RS19610 PF03109 ABC1 family MADE_RS19635 PF01979 Amidohydrolase family MADE_RS19660 PF01206 Sulfurtransferase TusA MADE_RS19665 PF00156 Phosphoribosyl transferase domain MADE_RS19670 PF03725 3' exoribonuclease family, domain 2 MADE_RS19670 PF01138 3' exoribonuclease family, domain 1 MADE_RS19675 PF03755 YicC-like family, N-terminal region MADE_RS19675 PF08340 Domain of unknown function (DUF1732) MADE_RS19685 PF07804 HipA-like C-terminal domain MADE_RS19685 PF13657 HipA N-terminal domain MADE_RS19690 PF01381 Helix-turn-helix MADE_RS19725 PF12161 HsdM N-terminal domain MADE_RS19725 PF02384 N-6 DNA Methylase MADE_RS19730 PF04851 Type III restriction enzyme, res subunit MADE_RS19730 PF08463 EcoEI R protein C-terminal MADE_RS19730 PF00271 Helicase conserved C-terminal domain MADE_RS19730 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MADE_RS19755 PF13411 MerR HTH family regulatory protein MADE_RS19780 PF13784 Fic/DOC family N-terminal MADE_RS19780 PF02661 Fic/DOC family MADE_RS19790 PF00356 Bacterial regulatory proteins, lacI family MADE_RS19800 PF05736 OprF membrane domain MADE_RS19800 PF00691 OmpA family MADE_RS19805 PF01966 HD domain MADE_RS19820 PF02798 Glutathione S-transferase, N-terminal domain MADE_RS19820 PF00043 Glutathione S-transferase, C-terminal domain MADE_RS19830 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MADE_RS19830 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MADE_RS19835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MADE_RS19835 PF02874 ATP synthase alpha/beta family, beta-barrel domain MADE_RS19840 PF00231 ATP synthase MADE_RS19845 PF02874 ATP synthase alpha/beta family, beta-barrel domain MADE_RS19845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MADE_RS19845 PF00306 ATP synthase alpha/beta chain, C terminal domain MADE_RS19850 PF00213 ATP synthase delta (OSCP) subunit MADE_RS19855 PF00430 ATP synthase B/B' CF(0) MADE_RS19860 PF00137 ATP synthase subunit C MADE_RS19865 PF00119 ATP synthase A chain MADE_RS19875 PF17762 HTH domain found in ParB protein MADE_RS19875 PF02195 ParB-like nuclease domain MADE_RS19880 PF13614 AAA domain MADE_RS19885 PF02527 rRNA small subunit methyltransferase G MADE_RS19890 PF13932 GidA associated domain MADE_RS19890 PF01134 Glucose inhibited division protein A MADE_RS19905 PF00258 Flavodoxin MADE_RS19910 PF10396 GTP-binding protein TrmE N-terminus MADE_RS19910 PF01926 50S ribosome-binding GTPase MADE_RS19910 PF12631 MnmE helical domain MADE_RS19915 PF04461 Protein of unknown function (DUF520) MADE_RS19975 PF00669 Bacterial flagellin N-terminal helical region MADE_RS19975 PF07196 Flagellin hook IN motif MADE_RS19975 PF00700 Bacterial flagellin C-terminal helical region MADE_RS19980 PF13174 Tetratricopeptide repeat MADE_RS19980 PF16331 TolA binding protein trimerisation MADE_RS19985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MADE_RS19985 PF01409 tRNA synthetases class II core domain (F) MADE_RS20065 PF12804 MobA-like NTP transferase domain MADE_RS20075 PF18543 Intracellular delivery domain MADE_RS20075 PF02661 Fic/DOC family MADE_RS20135 PF09278 MerR, DNA binding MADE_RS20135 PF00376 MerR family regulatory protein MADE_RS20140 PF01609 Transposase DDE domain MADE_RS20140 PF05598 Transposase domain (DUF772) MADE_RS20175 PF08884 Flagellin D3 domain MADE_RS20175 PF00700 Bacterial flagellin C-terminal helical region MADE_RS20175 PF00669 Bacterial flagellin N-terminal helical region MADE_RS20210 PF01679 Proteolipid membrane potential modulator MADE_RS20245 PF00873 AcrB/AcrD/AcrF family MADE_RS20250 PF02411 MerT mercuric transport protein MADE_RS20265 PF07043 Protein of unknown function (DUF1328) MADE_RS20320 PF09278 MerR, DNA binding MADE_RS20320 PF00376 MerR family regulatory protein MADE_RS20355 PF07237 Protein of unknown function (DUF1428) MADE_RS20385 PF13276 HTH-like domain MADE_RS20385 PF13683 Integrase core domain MADE_RS20390 PF08173 Membrane bound YbgT-like protein MADE_RS20410 PF01809 Putative membrane protein insertion efficiency factor MADE_RS20440 PF14592 Chondroitinase B