AV942_RS00005 SM00382 ATPases associated with a variety of cellular activities AV942_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AV942_RS00010 SM00480 DNA polymerase III beta subunit AV942_RS00020 SM00387 Histidine kinase-like ATPases AV942_RS00020 SM00433 TopoisomeraseII AV942_RS00030 SM00836 DALR anticodon binding domain AV942_RS00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AV942_RS00070 SM00474 3'-5' exonuclease AV942_RS00070 SM00475 5'-3' exonuclease AV942_RS00070 SM00482 DNA polymerase A domain AV942_RS00105 SM00257 Lysin motif AV942_RS00195 SM00481 DNA polymerase alpha chain like domain AV942_RS00285 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AV942_RS00285 SM01232 AV942_RS00285 AV942_RS00315 SM00052 Putative diguanylate phosphodiesterase AV942_RS00315 SM00267 diguanylate cyclase AV942_RS00325 SM00829 Enoylreductase AV942_RS00330 SM00450 Rhodanese Homology Domain AV942_RS00360 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS00375 SM00052 Putative diguanylate phosphodiesterase AV942_RS00375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS00375 SM00267 diguanylate cyclase AV942_RS00395 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS00425 SM00849 Metallo-beta-lactamase superfamily AV942_RS00450 SM00382 ATPases associated with a variety of cellular activities AV942_RS00455 SM00382 ATPases associated with a variety of cellular activities AV942_RS00475 SM00450 Rhodanese Homology Domain AV942_RS00480 SM00849 Metallo-beta-lactamase superfamily AV942_RS00500 SM00421 helix_turn_helix, Lux Regulon AV942_RS00560 SM00490 helicase superfamily c-terminal domain AV942_RS00575 SM00487 DEAD-like helicases superfamily AV942_RS00590 SM00382 ATPases associated with a variety of cellular activities AV942_RS00620 SM00849 Metallo-beta-lactamase superfamily AV942_RS00645 SM00876 Biotin and Thiamin Synthesis associated domain AV942_RS00695 SM00267 diguanylate cyclase AV942_RS00705 SM00072 Guanylate kinase homologues. AV942_RS00710 SM01409 AV942_RS00710 AV942_RS00715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS00715 SM00954 Region found in RelA / SpoT proteins AV942_RS00730 SM00487 DEAD-like helicases superfamily AV942_RS00730 SM00490 helicase superfamily c-terminal domain AV942_RS00760 SM00382 ATPases associated with a variety of cellular activities AV942_RS00825 SM00422 helix_turn_helix, mercury resistance AV942_RS00850 SM00052 Putative diguanylate phosphodiesterase AV942_RS00850 SM01034 Sensors of blue-light using FAD AV942_RS00875 SM00271 DnaJ molecular chaperone homology domain AV942_RS00915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS00935 SM00052 Putative diguanylate phosphodiesterase AV942_RS00935 SM00267 diguanylate cyclase AV942_RS00950 SM00341 Helicase and RNase D C-terminal AV942_RS00950 SM00487 DEAD-like helicases superfamily AV942_RS00950 SM00490 helicase superfamily c-terminal domain AV942_RS00950 SM00956 AV942_RS00950 AV942_RS00955 SM00924 MgtE intracellular N domain AV942_RS00965 SM00267 diguanylate cyclase AV942_RS00965 SM00448 cheY-homologous receiver domain AV942_RS00975 SM00971 Serine acetyltransferase, N-terminal AV942_RS01015 SM00014 Acid phosphatase homologues AV942_RS01055 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AV942_RS01095 SM00354 helix_turn _helix lactose operon repressor AV942_RS01160 SM00420 helix_turn_helix, Deoxyribose operon repressor AV942_RS01160 SM01134 AV942_RS01160 AV942_RS01200 SM00965 Secretin and TonB N terminus short domain AV942_RS01210 SM00028 Tetratricopeptide repeats AV942_RS01215 SM00382 ATPases associated with a variety of cellular activities AV942_RS01285 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS01315 SM01038 Beta galactosidase small chain AV942_RS01320 SM00448 cheY-homologous receiver domain AV942_RS01320 SM00862 Transcriptional regulatory protein, C terminal AV942_RS01325 SM00387 Histidine kinase-like ATPases AV942_RS01350 SM00478 endonuclease III AV942_RS01350 SM00525 AV942_RS01350 AV942_RS01370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS01370 SM00387 Histidine kinase-like ATPases AV942_RS01370 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS01375 SM00448 cheY-homologous receiver domain AV942_RS01375 SM00862 Transcriptional regulatory protein, C terminal AV942_RS01540 SM00422 helix_turn_helix, mercury resistance AV942_RS01655 SM00448 cheY-homologous receiver domain AV942_RS01655 SM00862 Transcriptional regulatory protein, C terminal AV942_RS01660 SM00387 Histidine kinase-like ATPases AV942_RS01695 SM00422 helix_turn_helix, mercury resistance AV942_RS01805 SM00354 helix_turn _helix lactose operon repressor AV942_RS01820 SM00267 diguanylate cyclase AV942_RS01835 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS01835 SM00387 Histidine kinase-like ATPases AV942_RS01835 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS01835 SM00448 cheY-homologous receiver domain AV942_RS01850 SM00354 helix_turn _helix lactose operon repressor AV942_RS01925 SM00855 Phosphoglycerate mutase family AV942_RS01940 SM00671 Sel1-like repeats. AV942_RS01945 SM00382 ATPases associated with a variety of cellular activities AV942_RS01950 SM01403 AV942_RS01950 AV942_RS01970 SM01382 AV942_RS01970 AV942_RS01970 SM01383 AV942_RS01970 AV942_RS01985 SM00322 K homology RNA-binding domain AV942_RS02035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS02035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS02060 SM00487 DEAD-like helicases superfamily AV942_RS02060 SM00490 helicase superfamily c-terminal domain AV942_RS02085 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS02095 SM00938 Nitrogen regulatory protein P-II AV942_RS02115 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AV942_RS02150 SM00073 Histidine Phosphotransfer domain AV942_RS02150 SM00387 Histidine kinase-like ATPases AV942_RS02150 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS02150 SM00448 cheY-homologous receiver domain AV942_RS02155 SM00434 DNA Topoisomerase IV AV942_RS02165 SM00052 Putative diguanylate phosphodiesterase AV942_RS02165 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS02165 SM00091 PAS domain AV942_RS02165 SM00267 diguanylate cyclase AV942_RS02170 SM01150 AV942_RS02170 AV942_RS02245 SM00965 Secretin and TonB N terminus short domain AV942_RS02265 SM00842 Cell division protein FtsA AV942_RS02275 SM00919 Malic enzyme, NAD binding domain AV942_RS02275 SM01274 AV942_RS02275 AV942_RS02295 SM01060 AV942_RS02295 AV942_RS02310 SM00052 Putative diguanylate phosphodiesterase AV942_RS02340 SM00859 Semialdehyde dehydrogenase, NAD binding domain AV942_RS02345 SM00851 MGS-like domain AV942_RS02355 SM00448 cheY-homologous receiver domain AV942_RS02355 SM00862 Transcriptional regulatory protein, C terminal AV942_RS02360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS02360 SM00387 Histidine kinase-like ATPases AV942_RS02360 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS02395 SM00450 Rhodanese Homology Domain AV942_RS02435 SM00479 AV942_RS02435 AV942_RS02505 SM00267 diguanylate cyclase AV942_RS02510 SM01004 Delta-aminolevulinic acid dehydratase AV942_RS02520 SM00487 DEAD-like helicases superfamily AV942_RS02520 SM00490 helicase superfamily c-terminal domain AV942_RS02530 SM00357 Cold shock protein domain AV942_RS02530 SM00382 ATPases associated with a variety of cellular activities AV942_RS02530 SM00959 Rho termination factor, N-terminal domain AV942_RS02540 SM00387 Histidine kinase-like ATPases AV942_RS02540 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS02540 SM00448 cheY-homologous receiver domain AV942_RS02550 SM01001 AIR carboxylase AV942_RS02610 SM00788 Adenylosuccinate synthetase AV942_RS02660 SM01005 Alanine racemase, C-terminal domain AV942_RS02685 SM00062 Bacterial periplasmic substrate-binding proteins AV942_RS02715 SM00670 Large family of predicted nucleotide-binding domains AV942_RS02735 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS02895 SM00257 Lysin motif AV942_RS02935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS02935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS02935 SM01049 AV942_RS02935 AV942_RS02950 SM00287 Bacterial SH3 domain homologues AV942_RS02955 SM01118 AV942_RS02955 AV942_RS02965 SM00927 DNA mismatch repair enzyme MutH AV942_RS02975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS02995 SM00448 cheY-homologous receiver domain AV942_RS03000 SM00267 diguanylate cyclase AV942_RS03025 SM00487 DEAD-like helicases superfamily AV942_RS03025 SM00490 helicase superfamily c-terminal domain AV942_RS03035 SM00670 Large family of predicted nucleotide-binding domains AV942_RS03050 SM00487 DEAD-like helicases superfamily AV942_RS03050 SM00490 helicase superfamily c-terminal domain AV942_RS03055 SM00028 Tetratricopeptide repeats AV942_RS03090 SM00387 Histidine kinase-like ATPases AV942_RS03090 SM00433 TopoisomeraseII AV942_RS03130 SM00841 Elongation factor P, C-terminal AV942_RS03130 SM01185 AV942_RS03130 AV942_RS03185 SM00014 Acid phosphatase homologues AV942_RS03195 SM01012 AV942_RS03195 AV942_RS03225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AV942_RS03240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS03240 SM00091 PAS domain AV942_RS03240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS03255 SM00382 ATPases associated with a variety of cellular activities AV942_RS03315 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AV942_RS03320 SM01007 Class II Aldolase and Adducin N-terminal domain AV942_RS03350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS03350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS03360 SM00400 zinc finger AV942_RS03360 SM00493 AV942_RS03360 AV942_RS03360 SM00766 DNA primase DnaG DnaB-binding AV942_RS03385 SM01207 AV942_RS03385 AV942_RS03390 SM00905 Dihydroneopterin aldolase AV942_RS03425 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS03435 SM00387 Histidine kinase-like ATPases AV942_RS03440 SM00448 cheY-homologous receiver domain AV942_RS03440 SM00862 Transcriptional regulatory protein, C terminal AV942_RS03445 SM00387 Histidine kinase-like ATPases AV942_RS03445 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS03455 SM00710 Parallel beta-helix repeats AV942_RS03490 SM00028 Tetratricopeptide repeats AV942_RS03495 SM00448 cheY-homologous receiver domain AV942_RS03495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS03500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS03500 SM00091 PAS domain AV942_RS03500 SM00387 Histidine kinase-like ATPases AV942_RS03500 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS03500 SM00448 cheY-homologous receiver domain AV942_RS03555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS03555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS03570 SM00650 Ribosomal RNA adenine dimethylases AV942_RS03590 SM00271 DnaJ molecular chaperone homology domain AV942_RS03635 SM00954 Region found in RelA / SpoT proteins AV942_RS03665 SM00822 AV942_RS03665 AV942_RS03670 SM01236 AV942_RS03670 AV942_RS03715 SM00387 Histidine kinase-like ATPases AV942_RS03715 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS03720 SM00448 cheY-homologous receiver domain AV942_RS03720 SM00862 Transcriptional regulatory protein, C terminal AV942_RS03765 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS03765 SM00924 MgtE intracellular N domain AV942_RS03795 SM00382 ATPases associated with a variety of cellular activities AV942_RS03825 SM00382 ATPases associated with a variety of cellular activities AV942_RS03860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV942_RS03865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV942_RS03930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS03930 SM00091 PAS domain AV942_RS03930 SM00387 Histidine kinase-like ATPases AV942_RS03930 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS03930 SM00448 cheY-homologous receiver domain AV942_RS03955 SM00861 Transketolase, pyrimidine binding domain AV942_RS03960 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV942_RS04025 SM00382 ATPases associated with a variety of cellular activities AV942_RS04060 SM00347 helix_turn_helix multiple antibiotic resistance protein AV942_RS04070 SM01263 AV942_RS04070 AV942_RS04090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS04090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS04130 SM00345 helix_turn_helix gluconate operon transcriptional repressor AV942_RS04130 SM00866 AV942_RS04130 AV942_RS04165 SM00382 ATPases associated with a variety of cellular activities AV942_RS04350 SM00382 ATPases associated with a variety of cellular activities AV942_RS04375 SM00487 DEAD-like helicases superfamily AV942_RS04415 SM00850 LytTr DNA-binding domain AV942_RS04430 SM00448 cheY-homologous receiver domain AV942_RS04435 SM00091 PAS domain AV942_RS04455 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS04465 SM00487 DEAD-like helicases superfamily AV942_RS04465 SM00490 helicase superfamily c-terminal domain AV942_RS04475 SM00382 ATPases associated with a variety of cellular activities AV942_RS04485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS04500 SM01329 AV942_RS04500 AV942_RS04505 SM00917 LeuA allosteric (dimerisation) domain AV942_RS04515 SM01192 AV942_RS04515 AV942_RS04515 SM01193 AV942_RS04515 AV942_RS04525 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AV942_RS04525 SM00534 ATPase domain of DNA mismatch repair MUTS family AV942_RS04535 SM00382 ATPases associated with a variety of cellular activities AV942_RS04540 SM00382 ATPases associated with a variety of cellular activities AV942_RS04560 SM00382 ATPases associated with a variety of cellular activities AV942_RS04630 SM00382 ATPases associated with a variety of cellular activities AV942_RS04670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV942_RS04675 SM01329 AV942_RS04675 AV942_RS04695 SM00267 diguanylate cyclase AV942_RS04755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS04800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV942_RS04810 SM00935 Outer membrane protein (OmpH-like) AV942_RS04835 SM00481 DNA polymerase alpha chain like domain AV942_RS04845 SM00977 TilS substrate C-terminal domain AV942_RS04850 SM00267 diguanylate cyclase AV942_RS04870 SM00062 Bacterial periplasmic substrate-binding proteins AV942_RS04875 SM01211 AV942_RS04875 AV942_RS04915 SM00421 helix_turn_helix, Lux Regulon AV942_RS04945 SM00858 AV942_RS04945 AV942_RS04950 SM00260 Two component signalling adaptor domain AV942_RS04950 SM00448 cheY-homologous receiver domain AV942_RS04955 SM00138 Methyltransferase, chemotaxis proteins AV942_RS05000 SM00047 Lysozyme subfamily 2 AV942_RS05075 SM00858 AV942_RS05075 AV942_RS05090 SM00822 AV942_RS05090 AV942_RS05170 SM00382 ATPases associated with a variety of cellular activities AV942_RS05175 SM00387 Histidine kinase-like ATPases AV942_RS05175 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS05180 SM00382 ATPases associated with a variety of cellular activities AV942_RS05180 SM00448 cheY-homologous receiver domain AV942_RS05205 SM00382 ATPases associated with a variety of cellular activities AV942_RS05265 SM00382 ATPases associated with a variety of cellular activities AV942_RS05265 SM00962 SRP54-type protein, GTPase domain AV942_RS05280 SM00448 cheY-homologous receiver domain AV942_RS05290 SM00073 Histidine Phosphotransfer domain AV942_RS05290 SM00260 Two component signalling adaptor domain AV942_RS05290 SM00387 Histidine kinase-like ATPases AV942_RS05290 SM01231 AV942_RS05290 AV942_RS05295 SM00448 cheY-homologous receiver domain AV942_RS05305 SM00260 Two component signalling adaptor domain AV942_RS05310 SM00260 Two component signalling adaptor domain AV942_RS05330 SM01018 B12 binding domain AV942_RS05355 SM00947 Carbonic anhydrase AV942_RS05390 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AV942_RS05430 SM00382 ATPases associated with a variety of cellular activities AV942_RS05435 SM00382 ATPases associated with a variety of cellular activities AV942_RS05455 SM00382 ATPases associated with a variety of cellular activities AV942_RS05480 SM00091 PAS domain AV942_RS05480 SM00382 ATPases associated with a variety of cellular activities AV942_RS05495 SM00344 helix_turn_helix ASNC type AV942_RS05500 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV942_RS05530 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AV942_RS05545 SM00028 Tetratricopeptide repeats AV942_RS05580 SM00028 Tetratricopeptide repeats AV942_RS05660 SM00829 Enoylreductase AV942_RS05675 SM00347 helix_turn_helix multiple antibiotic resistance protein AV942_RS05685 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS05740 SM00479 AV942_RS05740 AV942_RS05770 SM00487 DEAD-like helicases superfamily AV942_RS05805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS05835 SM00422 helix_turn_helix, mercury resistance AV942_RS05850 SM00422 helix_turn_helix, mercury resistance AV942_RS05855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AV942_RS05965 SM00382 ATPases associated with a variety of cellular activities AV942_RS06000 SM00382 ATPases associated with a variety of cellular activities AV942_RS06020 SM00327 von Willebrand factor (vWF) type A domain AV942_RS06035 SM00778 Zinc-binding domain of primase-helicase AV942_RS06105 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS06115 SM00836 DALR anticodon binding domain AV942_RS06115 SM01016 Arginyl tRNA synthetase N terminal dom AV942_RS06145 SM00267 diguanylate cyclase AV942_RS06180 SM00937 AV942_RS06180 AV942_RS06230 SM00463 Small MutS-related domain AV942_RS06260 SM00763 PrkA AAA domain AV942_RS06290 SM00965 Secretin and TonB N terminus short domain AV942_RS06305 SM00479 AV942_RS06305 AV942_RS06325 SM00357 Cold shock protein domain AV942_RS06340 SM00478 endonuclease III AV942_RS06350 SM00900 AV942_RS06350 AV942_RS06390 SM00487 DEAD-like helicases superfamily AV942_RS06390 SM00490 helicase superfamily c-terminal domain AV942_RS06470 SM00267 diguanylate cyclase AV942_RS06495 SM00028 Tetratricopeptide repeats AV942_RS06500 SM00327 von Willebrand factor (vWF) type A domain AV942_RS06535 SM00052 Putative diguanylate phosphodiesterase AV942_RS06535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS06535 SM00091 PAS domain AV942_RS06535 SM00267 diguanylate cyclase AV942_RS06545 SM00855 Phosphoglycerate mutase family AV942_RS06555 SM01091 Transporter associated domain AV942_RS06565 SM00382 ATPases associated with a variety of cellular activities AV942_RS06565 SM00962 SRP54-type protein, GTPase domain AV942_RS06565 SM00963 SRP54-type protein, helical bundle domain AV942_RS06615 SM00382 ATPases associated with a variety of cellular activities AV942_RS06665 SM00830 Chorismate mutase type II AV942_RS06670 SM00830 Chorismate mutase type II AV942_RS06675 SM00448 cheY-homologous receiver domain AV942_RS06690 SM00331 Sigma factor PP2C-like phosphatases AV942_RS06690 SM00448 cheY-homologous receiver domain AV942_RS06700 SM00052 Putative diguanylate phosphodiesterase AV942_RS06700 SM00267 diguanylate cyclase AV942_RS06710 SM00387 Histidine kinase-like ATPases AV942_RS06710 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS06720 SM00382 ATPases associated with a variety of cellular activities AV942_RS06720 SM00448 cheY-homologous receiver domain AV942_RS06755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV942_RS06760 SM00382 ATPases associated with a variety of cellular activities AV942_RS06835 SM00857 Resolvase, N terminal domain AV942_RS06865 SM00028 Tetratricopeptide repeats AV942_RS06865 SM00387 Histidine kinase-like ATPases AV942_RS06865 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS06865 SM00448 cheY-homologous receiver domain AV942_RS06875 SM00859 Semialdehyde dehydrogenase, NAD binding domain AV942_RS06890 SM00267 diguanylate cyclase AV942_RS06915 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS06955 SM00267 diguanylate cyclase AV942_RS07025 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS07025 SM00876 Biotin and Thiamin Synthesis associated domain AV942_RS07050 SM00226 Low molecular weight phosphatase family AV942_RS07060 SM00382 ATPases associated with a variety of cellular activities AV942_RS07080 SM00382 ATPases associated with a variety of cellular activities AV942_RS07085 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS07095 SM00028 Tetratricopeptide repeats AV942_RS07095 SM00448 cheY-homologous receiver domain AV942_RS07165 SM01321 AV942_RS07165 AV942_RS07180 SM00382 ATPases associated with a variety of cellular activities AV942_RS07195 SM00905 Dihydroneopterin aldolase AV942_RS07205 SM00387 Histidine kinase-like ATPases AV942_RS07210 SM00448 cheY-homologous receiver domain AV942_RS07210 SM00862 Transcriptional regulatory protein, C terminal AV942_RS07260 SM00481 DNA polymerase alpha chain like domain AV942_RS07280 SM00363 S4 RNA-binding domain AV942_RS07290 SM01266 AV942_RS07290 AV942_RS07315 SM00382 ATPases associated with a variety of cellular activities AV942_RS07380 SM00421 helix_turn_helix, Lux Regulon AV942_RS07380 SM00448 cheY-homologous receiver domain AV942_RS07385 SM00387 Histidine kinase-like ATPases AV942_RS07385 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS07385 SM00448 cheY-homologous receiver domain AV942_RS07400 SM00271 DnaJ molecular chaperone homology domain AV942_RS07410 SM00052 Putative diguanylate phosphodiesterase AV942_RS07410 SM00091 PAS domain AV942_RS07410 SM00267 diguanylate cyclase AV942_RS07430 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AV942_RS07435 SM00851 MGS-like domain AV942_RS07435 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AV942_RS07485 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS07485 SM01091 Transporter associated domain AV942_RS07500 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS07540 SM00903 Flavin reductase like domain AV942_RS07615 SM00829 Enoylreductase AV942_RS07630 SM01400 AV942_RS07630 AV942_RS07655 SM00937 AV942_RS07655 AV942_RS07705 SM00838 Elongation factor G C-terminus AV942_RS07705 SM00889 Elongation factor G, domain IV AV942_RS07710 SM01116 AV942_RS07710 AV942_RS07720 SM00219 Tyrosine kinase, catalytic domain AV942_RS07720 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AV942_RS07730 SM00460 Transglutaminase/protease-like homologues AV942_RS07760 SM00052 Putative diguanylate phosphodiesterase AV942_RS07760 SM00267 diguanylate cyclase AV942_RS07830 SM00347 helix_turn_helix multiple antibiotic resistance protein AV942_RS07845 SM00864 Tubulin/FtsZ family, GTPase domain AV942_RS07845 SM00865 Tubulin/FtsZ family, C-terminal domain AV942_RS07855 SM00052 Putative diguanylate phosphodiesterase AV942_RS07855 SM00091 PAS domain AV942_RS07855 SM00267 diguanylate cyclase AV942_RS07860 SM00052 Putative diguanylate phosphodiesterase AV942_RS07860 SM00267 diguanylate cyclase AV942_RS07890 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_RS07905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS07905 SM00091 PAS domain AV942_RS07905 SM00267 diguanylate cyclase AV942_RS07935 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_RS07940 SM01092 CO dehydrogenase flavoprotein C-terminal domain AV942_RS07980 SM00448 cheY-homologous receiver domain AV942_RS07990 SM00267 diguanylate cyclase AV942_RS07990 SM00448 cheY-homologous receiver domain AV942_RS07995 SM00387 Histidine kinase-like ATPases AV942_RS07995 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS07995 SM00448 cheY-homologous receiver domain AV942_RS08080 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AV942_RS08150 SM00052 Putative diguanylate phosphodiesterase AV942_RS08150 SM00267 diguanylate cyclase AV942_RS08230 SM00873 B3/4 domain AV942_RS08230 SM00874 tRNA synthetase B5 domain AV942_RS08230 SM00896 Ferredoxin-fold anticodon binding domain AV942_RS08235 SM00411 bacterial (prokaryotic) histone like domain AV942_RS08270 SM00487 DEAD-like helicases superfamily AV942_RS08270 SM00490 helicase superfamily c-terminal domain AV942_RS08270 SM00982 AV942_RS08270 AV942_RS08270 SM01058 CarD-like/TRCF domain AV942_RS08290 SM00387 Histidine kinase-like ATPases AV942_RS08295 SM00897 FIST N domain AV942_RS08295 SM01204 AV942_RS08295 AV942_RS08375 SM00878 Biotin carboxylase C-terminal domain AV942_RS08395 SM00422 helix_turn_helix, mercury resistance AV942_RS08415 SM00062 Bacterial periplasmic substrate-binding proteins AV942_RS08415 SM00267 diguanylate cyclase AV942_RS08470 SM00843 AV942_RS08470 AV942_RS08510 SM00421 helix_turn_helix, Lux Regulon AV942_RS08525 SM01040 BRO family, N-terminal domain AV942_RS08785 SM00387 Histidine kinase-like ATPases AV942_RS08785 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS08785 SM00448 cheY-homologous receiver domain AV942_RS08795 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS08815 SM00267 diguanylate cyclase AV942_RS08820 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS08830 SM00382 ATPases associated with a variety of cellular activities AV942_RS08830 SM00487 DEAD-like helicases superfamily AV942_RS08830 SM00490 helicase superfamily c-terminal domain AV942_RS08830 SM00847 Helicase associated domain (HA2) Add an annotation AV942_RS08845 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AV942_RS08850 SM00829 Enoylreductase AV942_RS08860 SM00479 AV942_RS08860 AV942_RS08890 SM00052 Putative diguanylate phosphodiesterase AV942_RS08895 SM00382 ATPases associated with a variety of cellular activities AV942_RS08910 SM00634 Bacterial Ig-like domain (group 1) AV942_RS08925 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AV942_RS08925 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AV942_RS08925 SM00493 AV942_RS08925 AV942_RS08965 SM00587 ZnF_C4 abd HLH domain containing kinases domain AV942_RS08970 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS08975 SM00363 S4 RNA-binding domain AV942_RS09010 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AV942_RS09015 SM00822 AV942_RS09015 AV942_RS09025 SM00825 Beta-ketoacyl synthase AV942_RS09065 SM00267 diguanylate cyclase AV942_RS09180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS09180 SM00091 PAS domain AV942_RS09180 SM00387 Histidine kinase-like ATPases AV942_RS09180 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS09180 SM00448 cheY-homologous receiver domain AV942_RS09185 SM00448 cheY-homologous receiver domain AV942_RS09185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS09195 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS09220 SM01387 AV942_RS09220 AV942_RS09225 SM00363 S4 RNA-binding domain AV942_RS09240 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AV942_RS09245 SM00448 cheY-homologous receiver domain AV942_RS09310 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS09350 SM00382 ATPases associated with a variety of cellular activities AV942_RS09380 SM00267 diguanylate cyclase AV942_RS09400 SM00857 Resolvase, N terminal domain AV942_RS09480 SM00347 helix_turn_helix multiple antibiotic resistance protein AV942_RS09495 SM00028 Tetratricopeptide repeats AV942_RS09520 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_RS09545 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AV942_RS09550 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AV942_RS09580 SM00357 Cold shock protein domain AV942_RS09590 SM00382 ATPases associated with a variety of cellular activities AV942_RS09590 SM01086 C-terminal, D2-small domain, of ClpB protein AV942_RS09595 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS09620 SM00731 SprT homologues. AV942_RS09650 SM00870 AV942_RS09650 AV942_RS09655 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS09670 SM00936 Penicillin-binding protein 5, C-terminal domain AV942_RS09740 SM00267 diguanylate cyclase AV942_RS09750 SM01103 AV942_RS09750 AV942_RS09760 SM00382 ATPases associated with a variety of cellular activities AV942_RS09790 SM00052 Putative diguanylate phosphodiesterase AV942_RS09790 SM00267 diguanylate cyclase AV942_RS09790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS09800 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV942_RS09805 SM00046 Diacylglycerol kinase catalytic domain (presumed) AV942_RS09805 SM00195 Dual specificity phosphatase, catalytic domain AV942_RS09805 SM00404 Protein tyrosine phosphatase, catalytic domain motif AV942_RS09855 SM00507 HNH nucleases AV942_RS09860 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS09860 SM00322 K homology RNA-binding domain AV942_RS09890 SM01321 AV942_RS09890 AV942_RS09905 SM00382 ATPases associated with a variety of cellular activities AV942_RS10020 SM00028 Tetratricopeptide repeats AV942_RS10040 SM00771 ZipA, C-terminal domain (FtsZ-binding) AV942_RS10045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV942_RS10045 SM00292 breast cancer carboxy-terminal domain AV942_RS10045 SM00532 Ligase N family AV942_RS10055 SM00849 Metallo-beta-lactamase superfamily AV942_RS10060 SM00382 ATPases associated with a variety of cellular activities AV942_RS10085 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS10150 SM00861 Transketolase, pyrimidine binding domain AV942_RS10165 SM00881 CoA binding domain AV942_RS10205 SM00642 Alpha-amylase domain AV942_RS10210 SM00642 Alpha-amylase domain AV942_RS10220 SM00642 Alpha-amylase domain AV942_RS10225 SM00354 helix_turn _helix lactose operon repressor AV942_RS10340 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV942_RS10355 SM00387 Histidine kinase-like ATPases AV942_RS10360 SM00448 cheY-homologous receiver domain AV942_RS10360 SM00850 LytTr DNA-binding domain AV942_RS10380 SM00450 Rhodanese Homology Domain AV942_RS10380 SM00849 Metallo-beta-lactamase superfamily AV942_RS10395 SM00028 Tetratricopeptide repeats AV942_RS10395 SM00448 cheY-homologous receiver domain AV942_RS10405 SM00450 Rhodanese Homology Domain AV942_RS10410 SM00054 EF-hand, calcium binding motif AV942_RS10415 SM00487 DEAD-like helicases superfamily AV942_RS10415 SM00490 helicase superfamily c-terminal domain AV942_RS10420 SM00882 Coenzyme A transferase AV942_RS10425 SM00882 Coenzyme A transferase AV942_RS10440 SM00387 Histidine kinase-like ATPases AV942_RS10490 SM00861 Transketolase, pyrimidine binding domain AV942_RS10505 SM00220 Serine/Threonine protein kinases, catalytic domain AV942_RS10540 SM00945 ProQ/FINO family AV942_RS10545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV942_RS10545 SM00245 tail specific protease AV942_RS10600 SM00981 AV942_RS10600 AV942_RS10610 SM00382 ATPases associated with a variety of cellular activities AV942_RS10750 SM00100 Cyclic nucleotide-monophosphate binding domain AV942_RS10750 SM00419 helix_turn_helix, cAMP Regulatory protein AV942_RS10775 SM00047 Lysozyme subfamily 2 AV942_RS10795 SM00450 Rhodanese Homology Domain AV942_RS10805 SM01144 AV942_RS10805 AV942_RS10830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV942_RS10830 SM00465 GIY-YIG type nucleases (URI domain) AV942_RS10835 SM00421 helix_turn_helix, Lux Regulon AV942_RS10835 SM00448 cheY-homologous receiver domain AV942_RS10930 SM00382 ATPases associated with a variety of cellular activities AV942_RS10940 SM00843 AV942_RS10940 AV942_RS10945 SM00344 helix_turn_helix ASNC type AV942_RS10950 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AV942_RS10950 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AV942_RS10955 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AV942_RS10975 SM00411 bacterial (prokaryotic) histone like domain AV942_RS10980 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS11000 SM00434 DNA Topoisomerase IV AV942_RS11035 SM00052 Putative diguanylate phosphodiesterase AV942_RS11035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS11035 SM00267 diguanylate cyclase AV942_RS11055 SM01130 AV942_RS11055 AV942_RS11135 SM00421 helix_turn_helix, Lux Regulon AV942_RS11135 SM00448 cheY-homologous receiver domain AV942_RS11165 SM00642 Alpha-amylase domain AV942_RS11175 SM00852 Probable molybdopterin binding domain AV942_RS11195 SM00382 ATPases associated with a variety of cellular activities AV942_RS11235 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS11305 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AV942_RS11315 SM00563 Phosphate acyltransferases AV942_RS11355 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS11390 SM00893 Electron transfer flavoprotein domain AV942_RS11395 SM00893 Electron transfer flavoprotein domain AV942_RS11405 SM00528 Domain in histone-like proteins of HNS family AV942_RS11425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS11425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS11440 SM00797 Allophanate hydrolase subunit 2 AV942_RS11445 SM00796 Allophanate hydrolase subunit 1 AV942_RS11500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS11545 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS11560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS11590 SM00829 Enoylreductase AV942_RS11605 SM00855 Phosphoglycerate mutase family AV942_RS11630 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS11635 SM00382 ATPases associated with a variety of cellular activities AV942_RS11665 SM00852 Probable molybdopterin binding domain AV942_RS11785 SM00052 Putative diguanylate phosphodiesterase AV942_RS11785 SM00267 diguanylate cyclase AV942_RS11790 SM00849 Metallo-beta-lactamase superfamily AV942_RS11820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AV942_RS11825 SM00450 Rhodanese Homology Domain AV942_RS11840 SM00382 ATPases associated with a variety of cellular activities AV942_RS11840 SM00448 cheY-homologous receiver domain AV942_RS11850 SM00387 Histidine kinase-like ATPases AV942_RS11850 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS11855 SM00448 cheY-homologous receiver domain AV942_RS11860 SM00387 Histidine kinase-like ATPases AV942_RS11860 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS11860 SM00448 cheY-homologous receiver domain AV942_RS11925 SM00631 AV942_RS11925 AV942_RS11930 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV942_RS11945 SM01350 AV942_RS11945 AV942_RS11950 SM00642 Alpha-amylase domain AV942_RS11955 SM00642 Alpha-amylase domain AV942_RS11965 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV942_RS12015 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS12025 SM00893 Electron transfer flavoprotein domain AV942_RS12030 SM00893 Electron transfer flavoprotein domain AV942_RS12100 SM00749 bacterial OsmY and nodulation domain AV942_RS12165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS12165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS12190 SM00052 Putative diguanylate phosphodiesterase AV942_RS12190 SM00267 diguanylate cyclase AV942_RS12200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS12205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS12205 SM00387 Histidine kinase-like ATPases AV942_RS12315 SM00849 Metallo-beta-lactamase superfamily AV942_RS12320 SM00257 Lysin motif AV942_RS12345 SM00840 AV942_RS12345 AV942_RS12365 SM00244 prohibitin homologues AV942_RS12375 SM00642 Alpha-amylase domain AV942_RS12385 SM00829 Enoylreductase AV942_RS12390 SM01060 AV942_RS12390 AV942_RS12395 SM00829 Enoylreductase AV942_RS12410 SM00539 Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins. AV942_RS12470 SM00859 Semialdehyde dehydrogenase, NAD binding domain AV942_RS12480 SM01007 Class II Aldolase and Adducin N-terminal domain AV942_RS12485 SM00100 Cyclic nucleotide-monophosphate binding domain AV942_RS12485 SM00419 helix_turn_helix, cAMP Regulatory protein AV942_RS12505 SM00825 Beta-ketoacyl synthase AV942_RS12555 SM00422 helix_turn_helix, mercury resistance AV942_RS12560 SM00829 Enoylreductase AV942_RS12590 SM00382 ATPases associated with a variety of cellular activities AV942_RS12600 SM00387 Histidine kinase-like ATPases AV942_RS12600 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS12600 SM00448 cheY-homologous receiver domain AV942_RS12720 SM00345 helix_turn_helix gluconate operon transcriptional repressor AV942_RS12765 SM00341 Helicase and RNase D C-terminal AV942_RS12765 SM00474 3'-5' exonuclease AV942_RS12795 SM00487 DEAD-like helicases superfamily AV942_RS12795 SM00488 AV942_RS12795 AV942_RS12795 SM00491 AV942_RS12795 AV942_RS12805 SM00014 Acid phosphatase homologues AV942_RS12820 SM00642 Alpha-amylase domain AV942_RS12940 SM00387 Histidine kinase-like ATPases AV942_RS12945 SM00493 AV942_RS12945 AV942_RS12955 SM00448 cheY-homologous receiver domain AV942_RS12965 SM00382 ATPases associated with a variety of cellular activities AV942_RS12990 SM00862 Transcriptional regulatory protein, C terminal AV942_RS13000 SM00091 PAS domain AV942_RS13000 SM00267 diguanylate cyclase AV942_RS13040 SM00028 Tetratricopeptide repeats AV942_RS13050 SM00382 ATPases associated with a variety of cellular activities AV942_RS13050 SM01086 C-terminal, D2-small domain, of ClpB protein AV942_RS13060 SM00363 S4 RNA-binding domain AV942_RS13130 SM00861 Transketolase, pyrimidine binding domain AV942_RS13185 SM00382 ATPases associated with a variety of cellular activities AV942_RS13195 SM00382 ATPases associated with a variety of cellular activities AV942_RS13230 SM00358 Double-stranded RNA binding motif AV942_RS13230 SM00535 Ribonuclease III family AV942_RS13240 SM00838 Elongation factor G C-terminus AV942_RS13295 SM00938 Nitrogen regulatory protein P-II AV942_RS13380 SM00904 Riboflavin kinase AV942_RS13425 SM00563 Phosphate acyltransferases AV942_RS13440 SM00411 bacterial (prokaryotic) histone like domain AV942_RS13445 SM00382 ATPases associated with a variety of cellular activities AV942_RS13445 SM00464 Found in ATP-dependent protease La (LON) AV942_RS13450 SM00382 ATPases associated with a variety of cellular activities AV942_RS13450 SM00994 ClpX C4-type zinc finger AV942_RS13450 SM01086 C-terminal, D2-small domain, of ClpB protein AV942_RS13530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS13540 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS13540 SM01240 AV942_RS13540 AV942_RS13560 SM00382 ATPases associated with a variety of cellular activities AV942_RS13565 SM00564 beta-propeller repeat AV942_RS13570 SM00028 Tetratricopeptide repeats AV942_RS13590 SM00028 Tetratricopeptide repeats AV942_RS13590 SM00257 Lysin motif AV942_RS13600 SM00562 AV942_RS13600 AV942_RS13630 SM00382 ATPases associated with a variety of cellular activities AV942_RS13675 SM00850 LytTr DNA-binding domain AV942_RS13690 SM01323 AV942_RS13690 AV942_RS13755 SM00382 ATPases associated with a variety of cellular activities AV942_RS13775 SM00098 Alkaline phosphatase homologues AV942_RS13780 SM00260 Two component signalling adaptor domain AV942_RS13780 SM00448 cheY-homologous receiver domain AV942_RS13845 SM00028 Tetratricopeptide repeats AV942_RS13870 SM00984 UDP binding domain AV942_RS14000 SM00382 ATPases associated with a variety of cellular activities AV942_RS14060 SM00052 Putative diguanylate phosphodiesterase AV942_RS14060 SM00267 diguanylate cyclase AV942_RS14075 SM00354 helix_turn _helix lactose operon repressor AV942_RS14115 SM00967 RNA 2'-O ribose methyltransferase substrate binding AV942_RS14190 SM00953 AV942_RS14190 AV942_RS14210 SM00448 cheY-homologous receiver domain AV942_RS14210 SM00862 Transcriptional regulatory protein, C terminal AV942_RS14215 SM00387 Histidine kinase-like ATPases AV942_RS14215 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS14260 SM01092 CO dehydrogenase flavoprotein C-terminal domain AV942_RS14265 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_RS14310 SM01322 AV942_RS14310 AV942_RS14355 SM00487 DEAD-like helicases superfamily AV942_RS14355 SM00490 helicase superfamily c-terminal domain AV942_RS14375 SM00028 Tetratricopeptide repeats AV942_RS14375 SM00387 Histidine kinase-like ATPases AV942_RS14375 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS14375 SM00448 cheY-homologous receiver domain AV942_RS14385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS14385 SM00387 Histidine kinase-like ATPases AV942_RS14385 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS14385 SM00448 cheY-homologous receiver domain AV942_RS14405 SM00448 cheY-homologous receiver domain AV942_RS14405 SM00862 Transcriptional regulatory protein, C terminal AV942_RS14410 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS14420 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS14425 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV942_RS14435 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AV942_RS14445 SM00244 prohibitin homologues AV942_RS14465 SM00382 ATPases associated with a variety of cellular activities AV942_RS14475 SM00696 Repeats found in Drosophila proteins. AV942_RS14505 SM00422 helix_turn_helix, mercury resistance AV942_RS14515 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS14575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AV942_RS14600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS14600 SM00382 ATPases associated with a variety of cellular activities AV942_RS14675 SM01011 Aminopeptidase P, N-terminal domain AV942_RS14700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AV942_RS14700 SM00387 Histidine kinase-like ATPases AV942_RS14700 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS14700 SM00448 cheY-homologous receiver domain AV942_RS14785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AV942_RS14785 SM00895 AV942_RS14785 AV942_RS14795 SM00644 AV942_RS14795 AV942_RS14850 SM00957 SecA DEAD-like domain AV942_RS14850 SM00958 SecA preprotein cross-linking domain AV942_RS14865 SM00864 Tubulin/FtsZ family, GTPase domain AV942_RS14865 SM00865 Tubulin/FtsZ family, C-terminal domain AV942_RS14870 SM00842 Cell division protein FtsA AV942_RS14990 SM00028 Tetratricopeptide repeats AV942_RS14990 SM00267 diguanylate cyclase AV942_RS15000 SM00382 ATPases associated with a variety of cellular activities AV942_RS15000 SM00448 cheY-homologous receiver domain AV942_RS15005 SM00387 Histidine kinase-like ATPases AV942_RS15050 SM00732 Likely ribonuclease with RNase H fold. AV942_RS15060 SM00382 ATPases associated with a variety of cellular activities AV942_RS15150 SM00360 RNA recognition motif AV942_RS15175 SM00986 Uracil DNA glycosylase superfamily AV942_RS15175 SM00987 UreE urease accessory protein, C-terminal domain AV942_RS15195 SM00382 ATPases associated with a variety of cellular activities AV942_RS15205 SM00829 Enoylreductase AV942_RS15215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AV942_RS15220 SM00226 Low molecular weight phosphatase family AV942_RS15235 SM00448 cheY-homologous receiver domain AV942_RS15245 SM00448 cheY-homologous receiver domain AV942_RS15245 SM00862 Transcriptional regulatory protein, C terminal AV942_RS15250 SM00387 Histidine kinase-like ATPases AV942_RS15250 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS15340 SM00749 bacterial OsmY and nodulation domain AV942_RS15365 SM00421 helix_turn_helix, Lux Regulon AV942_RS15365 SM00448 cheY-homologous receiver domain AV942_RS15385 SM00345 helix_turn_helix gluconate operon transcriptional repressor AV942_RS15385 SM00895 AV942_RS15385 AV942_RS15410 SM00267 diguanylate cyclase AV942_RS15410 SM00448 cheY-homologous receiver domain AV942_RS15455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS15455 SM00091 PAS domain AV942_RS15455 SM00387 Histidine kinase-like ATPases AV942_RS15455 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS15455 SM00448 cheY-homologous receiver domain AV942_RS15460 SM00287 Bacterial SH3 domain homologues AV942_RS15460 SM00644 AV942_RS15460 AV942_RS15500 SM00450 Rhodanese Homology Domain AV942_RS15650 SM00448 cheY-homologous receiver domain AV942_RS15660 SM01230 AV942_RS15660 AV942_RS15670 SM00091 PAS domain AV942_RS15670 SM00387 Histidine kinase-like ATPases AV942_RS15670 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS15675 SM00382 ATPases associated with a variety of cellular activities AV942_RS15675 SM00448 cheY-homologous receiver domain AV942_RS15680 SM00073 Histidine Phosphotransfer domain AV942_RS15685 SM00563 Phosphate acyltransferases AV942_RS15715 SM00244 prohibitin homologues AV942_RS15725 SM00387 Histidine kinase-like ATPases AV942_RS15725 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS15725 SM00448 cheY-homologous receiver domain AV942_RS15725 SM01358 AV942_RS15725 AV942_RS15840 SM00382 ATPases associated with a variety of cellular activities AV942_RS15860 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS15925 SM00028 Tetratricopeptide repeats AV942_RS15940 SM00345 helix_turn_helix gluconate operon transcriptional repressor AV942_RS15940 SM00895 AV942_RS15940 AV942_RS15960 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AV942_RS15980 SM00267 diguanylate cyclase AV942_RS16025 SM00886 Stress responsive A/B Barrel Domain AV942_RS16035 SM00382 ATPases associated with a variety of cellular activities AV942_RS16105 SM00849 Metallo-beta-lactamase superfamily AV942_RS16105 SM01027 Beta-Casp domain AV942_RS16120 SM00996 S-adenosyl-L-homocysteine hydrolase AV942_RS16120 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AV942_RS16140 SM00564 beta-propeller repeat AV942_RS16145 SM00062 Bacterial periplasmic substrate-binding proteins AV942_RS16160 SM00382 ATPases associated with a variety of cellular activities AV942_RS16190 SM00729 Elongator protein 3, MiaB family, Radical SAM AV942_RS16215 SM00421 helix_turn_helix, Lux Regulon AV942_RS16215 SM00448 cheY-homologous receiver domain AV942_RS16220 SM00091 PAS domain AV942_RS16220 SM00387 Histidine kinase-like ATPases AV942_RS16220 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS16220 SM00448 cheY-homologous receiver domain AV942_RS16225 SM00897 FIST N domain AV942_RS16225 SM01204 AV942_RS16225 AV942_RS16230 SM00900 AV942_RS16230 AV942_RS16240 SM00421 helix_turn_helix, Lux Regulon AV942_RS16240 SM00448 cheY-homologous receiver domain AV942_RS16280 SM00965 Secretin and TonB N terminus short domain AV942_RS16305 SM00421 helix_turn_helix, Lux Regulon AV942_RS16335 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AV942_RS16340 SM00421 helix_turn_helix, Lux Regulon AV942_RS16340 SM00448 cheY-homologous receiver domain AV942_RS16355 SM00487 DEAD-like helicases superfamily AV942_RS16355 SM00490 helicase superfamily c-terminal domain AV942_RS16415 SM00267 diguanylate cyclase AV942_RS16460 SM00966 SpoVT / AbrB like domain AV942_RS16515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AV942_RS16515 SM00895 AV942_RS16515 AV942_RS16540 SM00155 Phospholipase D. Active site motifs. AV942_RS16570 SM00448 cheY-homologous receiver domain AV942_RS16580 SM00387 Histidine kinase-like ATPases AV942_RS16585 SM00849 Metallo-beta-lactamase superfamily AV942_RS16590 SM00486 DNA polymerase type-B family AV942_RS16620 SM00360 RNA recognition motif AV942_RS16655 SM00986 Uracil DNA glycosylase superfamily AV942_RS16655 SM00987 UreE urease accessory protein, C-terminal domain AV942_RS16660 SM00052 Putative diguanylate phosphodiesterase AV942_RS16660 SM00267 diguanylate cyclase AV942_RS16660 SM00448 cheY-homologous receiver domain AV942_RS16740 SM00173 Ras subfamily of RAS small GTPases AV942_RS16740 SM00175 Rab subfamily of small GTPases AV942_RS16745 SM00052 Putative diguanylate phosphodiesterase AV942_RS16745 SM00267 diguanylate cyclase AV942_RS16755 SM00563 Phosphate acyltransferases AV942_RS16760 SM00563 Phosphate acyltransferases AV942_RS16890 SM00052 Putative diguanylate phosphodiesterase AV942_RS16915 SM00849 Metallo-beta-lactamase superfamily AV942_RS16950 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS16970 SM00903 Flavin reductase like domain AV942_RS17005 SM00100 Cyclic nucleotide-monophosphate binding domain AV942_RS17020 SM00849 Metallo-beta-lactamase superfamily AV942_RS17060 SM00900 AV942_RS17060 AV942_RS17150 SM00028 Tetratricopeptide repeats AV942_RS17160 SM00267 diguanylate cyclase AV942_RS17160 SM00448 cheY-homologous receiver domain AV942_RS17165 SM00479 AV942_RS17165 AV942_RS17170 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS17185 SM00387 Histidine kinase-like ATPases AV942_RS17185 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS17185 SM00448 cheY-homologous receiver domain AV942_RS17215 SM00421 helix_turn_helix, Lux Regulon AV942_RS17215 SM00448 cheY-homologous receiver domain AV942_RS17240 SM01358 AV942_RS17240 AV942_RS17255 SM00052 Putative diguanylate phosphodiesterase AV942_RS17255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AV942_RS17255 SM00091 PAS domain AV942_RS17255 SM00267 diguanylate cyclase AV942_RS17300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS17360 SM00984 UDP binding domain AV942_RS17600 SM00662 RNA polymerases D AV942_RS17605 SM00363 S4 RNA-binding domain AV942_RS17605 SM01390 AV942_RS17605 AV942_RS17670 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AV942_RS17675 SM01374 AV942_RS17675 AV942_RS17680 SM00387 Histidine kinase-like ATPases AV942_RS17680 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS17680 SM00448 cheY-homologous receiver domain AV942_RS17700 SM00967 RNA 2'-O ribose methyltransferase substrate binding AV942_RS17705 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS17705 SM00357 Cold shock protein domain AV942_RS17705 SM00955 AV942_RS17705 AV942_RS17750 SM00671 Sel1-like repeats. AV942_RS17790 SM00387 Histidine kinase-like ATPases AV942_RS17790 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS17790 SM00448 cheY-homologous receiver domain AV942_RS17810 SM00344 helix_turn_helix ASNC type AV942_RS17820 SM00357 Cold shock protein domain AV942_RS17850 SM00448 cheY-homologous receiver domain AV942_RS17860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS17860 SM00387 Histidine kinase-like ATPases AV942_RS17860 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS17865 SM00448 cheY-homologous receiver domain AV942_RS17930 SM00382 ATPases associated with a variety of cellular activities AV942_RS17935 SM00421 helix_turn_helix, Lux Regulon AV942_RS17960 SM00382 ATPases associated with a variety of cellular activities AV942_RS17960 SM01086 C-terminal, D2-small domain, of ClpB protein AV942_RS17975 SM00487 DEAD-like helicases superfamily AV942_RS17975 SM00490 helicase superfamily c-terminal domain AV942_RS17990 SM00919 Malic enzyme, NAD binding domain AV942_RS17990 SM01274 AV942_RS17990 AV942_RS18040 SM00052 Putative diguanylate phosphodiesterase AV942_RS18055 SM00382 ATPases associated with a variety of cellular activities AV942_RS18060 SM00382 ATPases associated with a variety of cellular activities AV942_RS18060 SM00962 SRP54-type protein, GTPase domain AV942_RS18060 SM00963 SRP54-type protein, helical bundle domain AV942_RS18145 SM00382 ATPases associated with a variety of cellular activities AV942_RS18150 SM00448 cheY-homologous receiver domain AV942_RS18150 SM00862 Transcriptional regulatory protein, C terminal AV942_RS18155 SM00387 Histidine kinase-like ATPases AV942_RS18155 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS18165 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AV942_RS18180 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS18215 SM00838 Elongation factor G C-terminus AV942_RS18215 SM00889 Elongation factor G, domain IV AV942_RS18230 SM00663 RNA polymerase I subunit A N-terminus AV942_RS18255 SM00649 Ribosomal protein L11/L12 AV942_RS18275 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AV942_RS18275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AV942_RS18290 SM00382 ATPases associated with a variety of cellular activities AV942_RS18310 SM00487 DEAD-like helicases superfamily AV942_RS18310 SM00490 helicase superfamily c-terminal domain AV942_RS18345 SM00642 Alpha-amylase domain AV942_RS18385 SM00487 DEAD-like helicases superfamily AV942_RS18385 SM00490 helicase superfamily c-terminal domain AV942_RS18390 SM00849 Metallo-beta-lactamase superfamily AV942_RS18400 SM00841 Elongation factor P, C-terminal AV942_RS18400 SM01185 AV942_RS18400 AV942_RS18475 SM00244 prohibitin homologues AV942_RS18480 SM00244 prohibitin homologues AV942_RS18500 SM01340 AV942_RS18500 AV942_RS18505 SM00257 Lysin motif AV942_RS18505 SM00646 AV942_RS18505 AV942_RS18565 SM00382 ATPases associated with a variety of cellular activities AV942_RS18600 SM00849 Metallo-beta-lactamase superfamily AV942_RS18620 SM00387 Histidine kinase-like ATPases AV942_RS18620 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS18630 SM00382 ATPases associated with a variety of cellular activities AV942_RS18640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS18645 SM00387 Histidine kinase-like ATPases AV942_RS18650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AV942_RS18695 SM00354 helix_turn _helix lactose operon repressor AV942_RS18715 SM00267 diguanylate cyclase AV942_RS18770 SM00116 Domain in cystathionine beta-synthase and other proteins. AV942_RS18785 SM00867 YceI-like domain AV942_RS18815 SM00829 Enoylreductase AV942_RS18820 SM00267 diguanylate cyclase AV942_RS18825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS18825 SM00387 Histidine kinase-like ATPases AV942_RS18825 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS18825 SM00448 cheY-homologous receiver domain AV942_RS18845 SM00420 helix_turn_helix, Deoxyribose operon repressor AV942_RS18845 SM01134 AV942_RS18845 AV942_RS18860 SM00267 diguanylate cyclase AV942_RS18875 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS18875 SM01009 AlkA N-terminal domain AV942_RS18905 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AV942_RS18905 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AV942_RS18955 SM00965 Secretin and TonB N terminus short domain AV942_RS19015 SM00670 Large family of predicted nucleotide-binding domains AV942_RS19040 SM00883 Chaperonin 10 Kd subunit AV942_RS19075 SM00878 Biotin carboxylase C-terminal domain AV942_RS19095 SM00479 AV942_RS19095 AV942_RS19095 SM00990 AV942_RS19095 AV942_RS19125 SM00062 Bacterial periplasmic substrate-binding proteins AV942_RS19145 SM00798 AICARFT/IMPCHase bienzyme AV942_RS19145 SM00851 MGS-like domain AV942_RS19155 SM01209 AV942_RS19155 AV942_RS19155 SM01210 AV942_RS19155 AV942_RS19160 SM00047 Lysozyme subfamily 2 AV942_RS19185 SM00448 cheY-homologous receiver domain AV942_RS19185 SM00862 Transcriptional regulatory protein, C terminal AV942_RS19190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV942_RS19190 SM00387 Histidine kinase-like ATPases AV942_RS19190 SM00388 His Kinase A (phosphoacceptor) domain AV942_RS19215 SM00363 S4 RNA-binding domain AV942_RS19230 SM00382 ATPases associated with a variety of cellular activities AV942_RS19310 SM00867 YceI-like domain AV942_RS19345 SM00382 ATPases associated with a variety of cellular activities AV942_RS19365 SM00320 WD40 repeats AV942_RS19385 SM00316 Ribosomal protein S1-like RNA-binding domain AV942_RS19385 SM00732 Likely ribonuclease with RNase H fold. AV942_RS19395 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AV942_RS19410 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS19430 SM00633 Glycosyl hydrolase family 10 AV942_RS19440 SM00861 Transketolase, pyrimidine binding domain AV942_RS19480 SM00710 Parallel beta-helix repeats AV942_RS19490 SM00813 Alpha-L-arabinofuranosidase C-terminus AV942_RS19525 SM00631 AV942_RS19525 AV942_RS19620 SM00563 Phosphate acyltransferases AV942_RS19640 SM00382 ATPases associated with a variety of cellular activities AV942_RS19705 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AV942_RS19805 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS19815 SM00530 Helix-turn-helix XRE-family like proteins AV942_RS19820 SM00487 DEAD-like helicases superfamily AV942_RS19830 SM00487 DEAD-like helicases superfamily AV942_RS19830 SM00490 helicase superfamily c-terminal domain AV942_RS19845 SM00487 DEAD-like helicases superfamily AV942_RS19880 SM00028 Tetratricopeptide repeats AV942_RS19885 SM00849 Metallo-beta-lactamase superfamily AV942_RS19895 SM00421 helix_turn_helix, Lux Regulon AV942_RS19925 SM00327 von Willebrand factor (vWF) type A domain AV942_RS19930 SM00327 von Willebrand factor (vWF) type A domain AV942_RS19985 SM00342 helix_turn_helix, arabinose operon control protein AV942_RS20000 SM00422 helix_turn_helix, mercury resistance AV942_RS20035 SM00354 helix_turn _helix lactose operon repressor AV942_RS20050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV942_RS20060 SM01144 AV942_RS20060 AV942_RS20080 SM00382 ATPases associated with a variety of cellular activities AV942_RS20120 SM00470 ParB-like nuclease domain AV942_RS20135 SM01228 AV942_RS20135 AV942_RS20190 SM00480 DNA polymerase III beta subunit AV942_RS20220 SM00387 Histidine kinase-like ATPases AV942_RS20220 SM00433 TopoisomeraseII