        gyrB    5848 ..    5863 + -10.4  -5.64274   ACACACATTATTAAA              GCGGCT TTCG AGCCGC               TTTTTTTATGGCTAA 100 59
JN178_RS00025 NONE
JN178_RS00030    7974 ..    7994 +  -8.3  -3.05816   GCGTAAACTGAAGGT            TCTCTGAGC CTT GCTCACAGA            TTAAGTAAACCGTGG  66 174
JN178_RS00050   12183 ..   12204 +  -5.1  -4.99568   CGCAATAGGCCTGCA           GTGCTGGCA ATTC TGCTAACAC            TTTTGTTTCATATTC  77 92
JN178_RS00075   15700 ..   15722 +  -2.7   -4.7373   AGTAGTCATTTCTTG           CTATTGTCT TTAAC AGGCAATTG           TTTTTACTACGCTAC  65 36
        elbB   20027 ..   20046 + -12.2  -3.71487   GATAAAAATAAAACA            GGGGAAAC AAGG GTTTCCCC             TTGTTCGCTATAGTC  90 61
JN178_RS00090   21606 ..   21620 +  -2.9  -5.26316   CTGGAAGAGCTTTTC               TACAT CATTA ATGTA               TTTTTTGTCGACTAA  76 61
JN178_RS00115   27094 ..   27111 +  -4.9  -3.01712   TAACCCGTAATCAAG             TTACAGGC ATT GCC-GTAA             TGTTAGGAGCGGCAG  51 31
        dprA NONE
JN178_RS00125   28741 ..   28772 +  -8.8  -2.92618   GCTTTTTGTGTTTAA      CT-AAGTGCGCTGCC AAT GGTAGTGCGCTTAAG      GTTCTTATGTCGAAA  69 59
JN178_RS00130 NONE
JN178_RS00135 NONE
        hemF   30904 ..   30935 + -14.6  -4.86133   TTAATCAATATGCCA      GAAACGCCGCAA CATAATCA TTGCGGCGTTTC       TTTTTGATCTATATC 100 56
JN178_RS00145   32156 ..   32173 +  -4.9  -3.23219   TCATAGAACGTATTG             GAAAGTG CTCT TACTTTC              TCTTCTCCACCTATT  54 441
        aroE   33500 ..   33523 +    -6  -3.28814   TTTTGTGCTGATTTA          CGAGTAACGTG CAG CACGCTAC-CG          TCTTGTACATTACTA  59 443
JN178_RS00165   36010 ..   36046 +  -6.2   -3.6849   CTCTACTTGACTGAA   TTGC-TTGTTATCA-ATC GAT GATTTGATAGCAAGGCAA   TTCTTCCGATTAGCT  62 192
JN178_RS00170   38995 ..   39022 +  -4.2  -3.29144   GGCTTAACCATACAA        CGCCCAAGAAGCT TTA AGCTT-TTGAGTG        TTGTAGACAAGCTAA  52 30
         rrf   39257 ..   39278 + -14.5  -5.65177   TCCCAATTCCGAAAA           GCCCTTGTC GTAA GACAAGGGC            TTTTTTTGTGCCTGT 100 40
JN178_RS00225   51986 ..   52009 + -15.4  -3.98859   AAGTAAAATGATGAT          GAGCTAGCAG CGCA CTGCTAGCTC           TATTTTTCGATTAAA 100 35
JN178_RS00235   54072 ..   54107 + -11.3   -2.8632   AAAGCATAATGAGCT    ACCATTAAAGCACCGC CTGTA GCGG-GCTTTAATGGC    TATGCTAATGTGTTA  78 61
        radC NONE
JN178_RS00255   57366 ..   57383 +  -8.4  -5.83211   AGCGTATTCGAAAAA             GCCGCT TTTATT AGCGGC              TTTTTTATTTTCGTA 100 46
JN178_RS00260   58165 ..   58175 +  -5.4  -3.14132   AACAACCTTGCTATC                 CACT AGC AGTG                 TTGCTCAAGAAAGCA  54 72
JN178_RS00265 NONE
JN178_RS00270   60984 ..   61005 +  -6.6  -5.42862   AGCACTATGCAAAAA           GGCTATGC TAAAAC GTATAGCC            TTTTTTTGCGCATGT  89 43
        rpmB NONE
        rpmG   61742 ..   61757 + -11.8   -5.1925   TTGTCTCCACGAAAA              CCCGGC CTTT GCCGGG               TTTTTTGCGTTATGG 100 67
JN178_RS00285 NONE
        mutM   63318 ..   63330 +  -3.4  -4.33274   CAACTGCACCGCGGT                GAAG GGCGA CTTC                TTTTACTAATGTCGA  62 158
JN178_RS00305   65677 ..   65695 +  -7.4  -3.53031   ATCAACTACTATCTA             CACTTAGC ATT GCGAAGTG             TTCCTTTGAAATAAC  66 65
JN178_RS00310 NONE
JN178_RS00315 NONE
JN178_RS00320   69835 ..   69880 +  -6.9  -2.75562   AGCCTAGGTACTCAA TAAAAAGCACACCATTGCCTT AAAA GAGGTGATGGTGTGCTAAATA ATTTACAAAGTTTGT  60 34
         kbl NONE
         tdh NONE
        glpE   72529 ..   72551 + -10.7  -6.09196   GGAATAAAAAGTAAA           TAAAGGTGC ATTAC GCACCTTTA           TTTTTTTGTTTTGAA 100 34
        glpG   73498 ..   73513 + -10.4  -4.44915   CTAGGGTCAAAAAAA              GCGAGC TAAT GCTCGC               TTTTCTGCGTACTTC  89 17
JN178_RS00350 NONE
        ubiA   75770 ..   75790 +  -4.7  -3.65902   TTCACCAAGTGAAAG            GTGTATCAC TAA GTGTTATAC            TTTCCATGGGATGGA  57 201
JN178_RS00360   76555 ..   76569 + -11.4  -4.46212   TTTTTCCGCAAAAAA               GCGCCT TTT AGGCGC               TTTTATCATCCAAAA 100 408
         rep   78990 ..   79005 +  -6.2  -4.10566   GATTTACAGGTTGGT              GTAAGT GTTC ACTTAC               TTCTTATTGTTAAAT  68 44
JN178_RS00390   82449 ..   82476 +  -2.6  -2.98778   CGTTCGAATCGCGCC        GGGTGTGCCATT TTTA AGTGCTTCACCC         TAATTTCACTTCTCA  43 16
JN178_RS00395 NONE
JN178_RS00400 NONE
JN178_RS00405 NONE
JN178_RS00410 NONE
JN178_RS00415   86259 ..   86283 +  -2.2  -2.75343   GTTTCCACCAGTGCA         CTATC-AGTTC TCTA GAACTTGAAAG          CTTTAGGCCTGTAGG  40 226
JN178_RS00480  102614 ..  102633 +  -2.8  -3.90425   GCTTGGTTAGGTGGA            CACCAATGG TTA CC-TTGGGG            TTGTTACTTTGACTA  54 246
JN178_RS00495 NONE
JN178_RS00500 NONE
JN178_RS00505  109996 ..  110017 + -13.1  -5.15969   GATTACGTTCAAAAG           CCCGATGAA ATTG TTCATCGGG            TTTTTTACATTCAGA 100 63
JN178_RS00510  112035 ..  112048 +  -3.9  -3.15544   CTGCTTGGTACATAA               TCAAA CCAG TTTGA                TTAATCGCGATAACG  48 81
JN178_RS00515 NONE
JN178_RS00520  114318 ..  114346 +  -9.8  -3.14878   CAAACCAGATTGACG       TTTGCTGTTCGCT TGGT AGCGAA-AGCAAA        TATTCAATTGAGAAG  72 296
JN178_RS00530  115845 ..  115869 + -14.3  -4.60292   CCTACAAACTAAAAA          GCCGCTTTCAC TGA GTGAATGCGGC          TTTGTTCTTATTATA 100 66
JN178_RS00540  118918 ..  118935 +  -6.2  -5.10154   AAGCTTATAAGTAAA             GGGGCC TGTAAT GGCTCC              TTTTTGCTTTTAACT  80 72
JN178_RS00545  120044 ..  120069 + -14.9  -2.97166   TAGATATGGAAAAAA         TAAAACGCGAC ATTC GTCGCGTTTTA          TCTGCTTGATTAACT 100 62
JN178_RS00555 NONE
JN178_RS00560 NONE
JN178_RS00565 NONE
JN178_RS00570  125885 ..  125895 +    -4  -3.08438   GGCCAAGGTGATCGG                 CTTT AAC AAAG                 TCTTGCCCTGTCATA  47 139
JN178_RS00635  140537 ..  140566 +  -7.2  -3.11173   TGCATACACACGTTA       TGCTGCATGGTG TAGGTT TGCCATGTAGCA        TTAAATCCATTATCT  60 96
         gmk  142076 ..  142096 +    -9   -3.2313   TTTTAAACCAATAGC            GTGCGATC AGTGC GATCGCGC            TGTGTTAATTTCACA  72 62
        rpoZ  142506 ..  142535 + -20.9  -4.20806   TTTACGAGTAATTTA       GCGCCAGTGCTTT GAAA AAAGCACTGGCGC        TTTACTTTTGGCGTA 100 60
        spoT NONE
JN178_RS00660 NONE
        trmH  145865 ..  145907 +  -7.3   -3.2794   TGGCAAAAAAGAAAT GTTA--GCTATAACGGCGTCA TGA TAACGCTGTTATAGCGCTAAC TTAGTATCAGTCACA  64 41
        recG NONE
JN178_RS00685 NONE
JN178_RS00690  151970 ..  151991 +  -8.7  -5.63517   GTTCATATCGCTAAA           GCTCGTAGC CTCG GTTACGGGC            TTTTTTATTTGGCAG 100 58
JN178_RS00695 NONE
JN178_RS00700 NONE
JN178_RS00705 NONE
JN178_RS00710 NONE
JN178_RS00715  158273 ..  158289 +  -5.1  -3.48598   CCCACTGTACTAATT              CTTGTTG CGC CAACGGG              TATTTCACTTCGTTA  56 462
JN178_RS00725  160179 ..  160213 +  -2.8  -3.58864   TCTAAAAAGCAAAGC     CAATGGCGACGC CTGCCACAATC GCGTCGGCATGG     TCTTTGTGGTAATCG  49 36
JN178_RS00740  163697 ..  163737 +  -3.2  -4.39166   GCTGGCTACTATATA GCAGCGGTAACACGTCAGG CGTA CCTGCCGT-TAACCAATGC  TTTTGATCTGTGCGG  62 425
JN178_RS00755  168091 ..  168107 + -10.8  -4.37991   TCATTTGCTTAAAAA              GCCCGC GTAAA GCGGGC              TTTTGCGTATTTTTA  90 76
JN178_RS00765  169997 ..  170017 + -13.3  -2.99428   ATTATTCTTAGGTAG            GCAGGAGGC AAC GCTTCCTGC            TGTCATTCGTTATTG  95 308
JN178_RS00770 NONE
JN178_RS00775  174366 ..  174380 +  -3.5  -4.72201   TTCAAACAGGGATAT               TGGTG ATGAC CACCG               TTGTTTTTTCTCACG  67 78
JN178_RS00780  174942 ..  174954 +  -3.3  -4.86001   GAGCAAGTCACAGTC                CCGCA GCT TGCCG                TTTTTGTGGCATGAT  69 87
JN178_RS00785 NONE
JN178_RS00790  178085 ..  178096 +  -4.4    -2.606   GCAAAAGGGTAAACA                TAGG CATA CCTA                 ATGTGTTTCATTGCT  46 290
JN178_RS00810  182201 ..  182221 +  -4.6   -4.2349   GGGTTGAGAGTAGGC            GCGCTCCA CTCGC TGCGGCGC            TTTTCGATCTGGCAA  64 344
JN178_RS00835  189044 ..  189057 +  -5.9  -3.05963   CGTATGTAGACAGCT               GGTGG TGCC CCGCC                TCTTGCAGTCGGCGT  52 486
JN178_RS00845  191267 ..  191278 +  -3.6  -3.83026   TGGCCCACAAGAGAA                GTGC GCAG GCGC                 TTTCGTCTCGAAAGA  55 95
JN178_RS00850  192646 ..  192658 +  -3.4  -4.38154   GCTTTCTTAGGGCTC                GGAA CACTT TTCC                TTTTATAACCCGTCT  62 5
        rarD  193827 ..  193841 +  -4.9  -3.28924   CGGCCACTGTTCTTA               GCGGC ATAAA GCTGC               TTATCGGCAAGGCTG  54 102
        cysE  198454 ..  198470 + -10.8  -2.56314   CTTTTGACGCGTAAA              GCGCGC GATCA GCGCGC              TGAATTAAAGTTTCT  74 100
        rraA  207471 ..  207484 +  -6.7   -2.6175   TGCGGATATCTTGTG               GCGTA ATAC TACGC                GTTAGTTGGGCTGTC  55 327
JN178_RS00940 NONE
         ppa  212111 ..  212131 + -12.6  -5.07486   AATTGATGTTAAAAA            GGGCTGGT GATAA ACCAGCCC            TTTTTGTTGGAGCTG 100 55
JN178_RS00950  212649 ..  212666 +  -9.9  -5.18726   GGTGAAGCAGTAGAA             GGGTTCT AGAA AGAACCC              TTTTTCTTATCAGCC 100 17
JN178_RS00960 NONE
JN178_RS00965  216687 ..  216698 +  -5.8  -4.13767   CACCGGTAACTTTTA                CTGG CTCG CCAG                 TTTTAGGGTGGCGCA  65 481
JN178_RS01050  233389 ..  233410 + -13.1  -5.66684   GATAAAAACGAAAAA           GCGTTAGTG ACAT CACTAACGC            TTTTTTTGTCGCTTA 100 57
JN178_RS01065 NONE
JN178_RS01070  239117 ..  239144 +  -7.2  -2.64888   CATTCATTTCAAGCA        G-GCTTTGTTCAA GAA TTGAATAAAGCGC        ATCTTTCGATACATT  57 359
JN178_RS01080  240814 ..  240824 +    -4  -3.75629   AGTAGCGTGATGATT                 TATG CAG CATA                 TTTCGATTAACAATG  55 312
JN178_RS01090  243310 ..  243326 +  -5.1  -4.73633   TAATATACTATTGTT              GGGTAAA CGT TTAACCC              TTTTGTCTCTTGTTG  72 123
JN178_RS01095 NONE
        galK  245635 ..  245654 +  -8.6  -5.60993   GTCTGTGTCCCTTAA            GCCGC-ATC ATT GATTGCGGC            TTTTTTTATAAAAAC 100 92
JN178_RS01105  247637 ..  247649 +  -5.5  -3.16564   ACTTTCGCGCTTGTT                GCAGT TGT GCTGC                TTAGTACAGTAAGGC  54 194
JN178_RS01110  248312 ..  248328 + -12.3  -5.37593   TACGCAGTTTAAAAA              GCCCTTC TTT GAAGGGC              TTTTTTCGTTTAACG 100 54
JN178_RS01115  249498 ..  249519 +  -2.3   -3.3449   ATGTTGTCAGTCTTG           TTAACC-GCT ATA AGCAGGGTAA           TATTACTTATTGCCT  45 124
JN178_RS01120  250873 ..  250893 + -12.6  -5.07486   TTTTAACTAAAAAAA            CGGGCTCA CCAAT TGAGCCCG            TTTTTCTTAAACATG 100 54
JN178_RS01125  252279 ..  252323 +  -8.8  -4.34267   CAATACTTCACCTGA GAATACCTCTCCGTCGATT-TG TTG CAGAATCGACGGCGTG-TATTC TTTTAGCTTCTCTGG  84 170
JN178_RS01160  264151 ..  264162 +  -4.4  -4.67608   ATTTTCTTTAATGTT                CGAA AATG TTCG                 TTTTGTGTTGACATG  68 185
        glpD NONE
JN178_RS01170 NONE
JN178_RS01175 NONE
JN178_RS01180  268301 ..  268318 + -11.3  -4.16814   CGAGTAAGCAGGAAA             GGCAACC TTAA GGTTGCC              TTATTTGTATCATGG  86 34
        mreC NONE
        mreD NONE
         maf NONE
         rng NONE
JN178_RS01205 NONE
JN178_RS01210 NONE
        tldD  278049 ..  278077 + -13.2  -5.72616   TTCAGTGAATCAAGC        GCCCCTGATGGT ACAAC ACTGTCAGGGGC        TTTTTTTATGTGCAT 100 59
        pmbA  284542 ..  284557 +  -2.5  -4.66163   GCCTATGAAGGTGTG              GCGCA GAATAA TGTGC               TTTTTCACTCAGGCT  65 243
JN178_RS01250  288456 ..  288484 + -14.7  -3.44848   CTGCAACAACGCAAA        AAAAAGCCGCTAC ACA GTAGCGGCTTTTC        TATTTAATCGGAACG 100 48
        mutY NONE
JN178_RS01290 NONE
JN178_RS01295  297062 ..  297083 + -12.3   -5.1861   GCACCATTCTTAGAA           GCCCTTGCA GAAA TGCAGGGGC            TTTTTTGATCATGCG 100 35
JN178_RS01305  298542 ..  298554 +  -3.3    -3.409   GGTTTTGATGGCGAA                TGGCG TAA CGCTG                TCTTCTTAACGCTTT  49 238
JN178_RS01310 NONE
JN178_RS01315  300266 ..  300285 +  -4.3   -4.0115   TAGACGTTACCAAGC            GTGTGTT GGGATA AGCACAC             CTTTTTCTTTTTATT  59 12
JN178_RS01320 NONE
JN178_RS01325  303243 ..  303260 +  -5.5  -2.59191   TTCTAATCAGATTTG             AGGGCAA TAAG TTGCCCA              GTTCTAACGGTATAA  51 497
JN178_RS01330  303599 ..  303616 +  -9.9  -5.15634   TATGCAAAATCGAAA             GCCTTAC ATCA GTAAGGC              TTTTTTGATCCAATC  93 49
JN178_RS01345  308103 ..  308116 +  -5.3  -5.62288   CTATTAAATTCGACT               TGCAA ACGT TTGCA                TTTTTGTTTTCTTAA  86 44
JN178_RS01350 NONE
JN178_RS01355  311053 ..  311071 +  -5.2  -3.16872   GGTCAAAGAGCGACA             GCTGCGCA ATA TCTGCAGC             CTTTTCACTGTTGGT  52 144
JN178_RS01365 NONE
JN178_RS01370 NONE
JN178_RS01375  317267 ..  317279 +  -9.1   -3.1855   GCTCGAAGAATGAAC                GAGCG CTA CGCTC                TTCAATATTGCGCAA  70 218
JN178_RS01390  320791 ..  320804 +  -3.9  -2.68947   GCACTAATTCCACCA               TATAC TTTA GTATA                GTCTTCTTCGTTAAG  44 123
JN178_RS01400  325159 ..  325178 +  -3.6  -4.83593   GCATAGTACCTGCTT            GTGTTTTT ACAC AAAAGCGC             TTTTTAATCGTTATT  68 411
JN178_RS01460 NONE
JN178_RS01465  338445 ..  338459 +    -5  -3.32844   ACTTGAAAATCTGAG               CTTGAA AGC TTCAGG               TTATAGACTGAAGGC  54 44
JN178_RS01470  338619 ..  338659 +  -8.5  -4.80882   AAAACGGAATTTAAA  TCCTAATGAATATTTACTG TTT CAGTAAGCATTGATTAGGG  TTTTTACTCTAAAGT  87 97
JN178_RS01475 NONE
         rrf  342021 ..  342036 + -11.8  -5.07011   TCCCAATTAAAGAAA              CCCGCC TTAC GGCGGG               TTTTTGCTTTATATA 100 40
         rrf  342280 ..  342295 + -10.4  -5.01845   TTCTAAAACAAAGAA              CCCAGC GAAA GCTGGG               TTTTTGCTTCTTATG  93 45
JN178_RS01490  342880 ..  342891 +  -4.4  -3.65351   AAAAGAGTCACAAAA                CGAT ACGA ATCG                 TTTCGATGGCAATGC  55 138
JN178_RS01495 NONE
JN178_RS01500  344706 ..  344721 + -10.4   -5.4251   AACACCAATAAAAAA              GCCTGC ATAA GCAGGC               TTTTTTGTATCTAAA 100 49
        acnA  349193 ..  349209 + -13.7  -5.51046   ATCAAAAAATAAAAA              GCCCAGC TTA GCTGGGC              TTTTTTATGTATTTA 100 65
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW  353913 ..  353927 +  -2.8  -2.77344   GTGCTGAGTAAGAAG               GGGATT AGA AATGCC               ATTATTGAAAGCTAA  42 30
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  356980 ..  357009 + -14.5  -5.45802   CTTTTTTCAAAGTCT       TAAAAAAGCCGCT TTCG AGCGGCTTTTTTG        TTTTTATTTTACGAC 100 48
        waaA  360942 ..  360963 + -15.9  -4.78572   TTCTCCAGGGAGAGG           CCTCCTGCC GATG GGCAGGAGG            TTTTCTTACTTCAAG 100 295
JN178_RS01600  363810 ..  363831 +  -2.1  -3.18274   AAGGGCGACAAGCAA           CGCTCAATC GAGC GGTAGTGCG            TTGAGTTAACGTCAA  43 0
JN178_RS01605  364788 ..  364810 +  -3.5  -3.08015   CACGGTGGCCTGCTC          TTCA-GTAGC GGTT GCTACCTGAG           TATTAACATCATTGA  45 227
JN178_RS01620  370311 ..  370321 +  -6.8  -4.23045   GTCGCTATGGCTGAT                 GCGT TTG ACGC                 TTTGTTCGATGATTG  72 487
        hrpB  374923 ..  374937 +  -5.6  -3.30243   AGGAACAATCACGTA               GGCGTT GGT ATCGCC               TTCTCCCAACTCACT  56 444
        mrcB  378551 ..  378565 +  -4.2  -3.33744   TCGATATCCGTTTAA               GGCGTT TTC AGTGCC               CTTTTTGCAAAAACA  52 178
JN178_RS01665 NONE
JN178_RS01670  382779 ..  382795 +    -5  -5.14563   GGAGTAAATGATTAA              CGCCCC TCATT GGGACG              TTTTTTAATCCGAGC  76 34
        glnK NONE
JN178_RS01685  385525 ..  385542 + -14.1  -5.46698   TATTACTTCACTTAA             GCCCCGC ATCT GCGGGGC              TTTTTTCATTTTAGC 100 86
         ggt  387467 ..  387484 +  -4.1  -3.77464   CATTACACGCACACG             CGGTAAA AGGT TGTACCG              TTTAGTGGCTGGTGT  55 62
JN178_RS01695  388541 ..  388556 + -11.8  -4.68846   AAAAGATACAAAAAA              GCCCCG ATAT CGGGGC               TTTTGCTTTATTAAT 100 59
JN178_RS01715 NONE
JN178_RS01720  396141 ..  396157 +  -6.5  -2.52896   TTTTCAGCGTTACCG              TCACCGC AAC GTGGTGG              TAGCTTAGCCGATAG  56 1
JN178_RS01725  397039 ..  397062 + -12.6  -4.08767   GCAAGACAGCAAGAC          TAATGGCACT AGTG AGTGCCATTA           TTTTCAGACAGTACC 100 23
        parC  402967 ..  403006 + -18.9  -3.03903   AGACTGAGTAAACCA  TGCATAAAAAAAGCGCC GATACA GGCGCTTTTTTTATGCG   TATTGAAAAGCTTTT 100 34
JN178_RS01740 NONE
JN178_RS01745  405873 ..  405901 +  -4.5  -5.04175   TTGGCTAAAAAAAAA        GCCCACACACT GCAATTA AGTGAATGGGC        TTTTTGTATGCTTAA  75 79
JN178_RS01790  415887 ..  415906 + -10.8  -5.16133   AACGTTGAGTTAAAA            GCCTAATG CTGT CATTAGGC             TTTTTATATTGTGCT  93 76
JN178_RS01795 NONE
JN178_RS01800  416616 ..  416639 +  -4.5  -2.86078   AACCGCGCTTATATA          GAGGGCACC ACTACA GGTGACTTC           GCTTTTCTTTTTCTC  48 44
JN178_RS01850  428459 ..  428478 +  -2.8  -2.56124   GGCACGCGTTAGGCG            TGCCAC TTCAGGCC GTGGCG             ATGTATTTGCCTGAA  41 51
JN178_RS01855  430259 ..  430273 +  -7.1  -5.64274   AGTATTTACGAAAAA               GCAGG TTAGT CCTGC               TTTTTTTGTGCCTGA  93 81
JN178_RS01860  431596 ..  431612 +  -9.4  -5.76633   CCTTTTATTCCAAAA              CCGAGC CGAGT GCTCGG              TTTTTTTATATGTCG 100 69
        yghU  432686 ..  432720 +  -8.7  -3.17723   ATCTGCTCGCGAGCG    TAGCGCTCACCAATCT CGAT AGAA-GGTGAGTGCTA     TTGCGTTGCAACTAA  70 74
JN178_RS01875 NONE
JN178_RS01880  436172 ..  436183 +  -2.2  -4.18094   GCAGCGAAATATTGT                CGTA GTGA TGCG                 TTTTGACATCGTTTC  57 255
JN178_RS01925  446945 ..  446967 + -12.1   -4.7497   AAATTAAGTAAAAAA           GCGTTGATG AGTAG CATCAACGC           TTTTTCATAACTACG 100 58
JN178_RS01935 NONE
JN178_RS01940  450258 ..  450269 +  -4.4  -3.71672   CTGACGCGGGGCGGT                GAGT AAAC ACTC                 TTCATTTTGGTAAAA  57 89
JN178_RS01945  451277 ..  451306 +  -2.9  -5.17576   TTAGGTCATGTTGCT       AT-AGCGCATAGTA TTG TACTATGCGCCCAC       TTTTTTCACTTAGTC  70 37
        trmL  451856 ..  451871 + -10.4   -5.1925   GTTACTCATAAAAAA              GGCTGC ACAT GCAGCC               TTTTTTAAATTGTGA 100 82
JN178_RS01975  455857 ..  455870 +  -4.5   -3.4072   AAATGGATAATTGTA               GATGC GTTT GCGTC                TTATAATAACAAGTC  53 299
JN178_RS01980  456705 ..  456716 +    -3  -3.58542   CTGAGCTTATTAACG                CTAA CCGT TTAG                 TCTATTTTCTTCTCG  49 87
JN178_RS01985  457231 ..  457242 +  -4.4   -3.6502   GTTTTTACTGAACAC                CTCT CAAC AGAG                 TTTAAGTAGACAATG  55 5
         orn NONE
JN178_RS02015  461801 ..  461817 +  -5.2  -3.29144   CGCTCCAAATTTAAA              TCTGAT GTCTA ATCAGA              TTATCAAAAAGATGC  54 34
JN178_RS02020  462411 ..  462425 +    -5  -3.38316   ATGCTTTCTGCTGAG               CATACT TGT GGTATG               TTGATTAAATAATAA  56 512
JN178_RS02025  465078 ..  465104 + -10.2   -4.8048   TATACGCATAATAAA         GGCGCTTATGCT TCT GGTATAAGTGCC         TTTTTACTATAAAAG  91 60
JN178_RS02030  466738 ..  466752 +  -4.2  -3.06796   TTAATGTAGCAGTCA               ACTGGT CTA ACCAGA               TTGGCTGCGCTGCAA  50 75
JN178_RS02035  467306 ..  467321 + -11.8  -5.06414   AAAATGAAAAAAGAA              GGCCGC TTAA GCGGCC               TTTTTATTGAGGACA 100 44
JN178_RS02040  467959 ..  467986 +  -4.4  -3.05268   TTAAGTCGAAATATT        TATCCTAATTATT GCG AATA-TTGGGATA        TATATCTCACTTTTG  49 120
JN178_RS02045 NONE
        ilvN  470338 ..  470351 +  -9.5  -5.25735   CGTAATAACAAAAAA               GGGCG TTTA CGCCC                TTTTTGCTTTTTTAG 100 50
JN178_RS02070  478322 ..  478333 +  -5.8  -3.41738   GTATTATTGCGCCAA                CGCA TTCC TGCG                 TATATTTCTTCAACG  56 168
        tatA NONE
        tatB NONE
        tatC NONE
JN178_RS02095  481186 ..  481203 +  -2.6  -2.76263   CGAATAAAAGTGAAG             CGCCTT AAGTAG ATGGCG              TGGTTCGATGCTGGC  42 14
JN178_RS02100 NONE
JN178_RS02105 NONE
        hemB  484912 ..  484929 + -12.7  -5.28778   TAGAACAATAAAAAA             GCCGCGA TTAT TCGCGGC              TTTTTTATGGATAGT 100 57
        trxA  488218 ..  488254 + -13.1  -4.09739   TAATTAATTGCGCAG    TGAAGAAACCGGGGCCA AAA TGGCGCCGGTTTTTTTG    TTTTAAGCCCATTCA 100 38
         rho  489766 ..  489783 + -11.3  -5.85178   GATTATTTAAAAAAA             CGCCACT TCTT AGTGGCG              TTTTTTTTGCCTATT 100 50
JN178_RS02135 NONE
JN178_RS02140  494166 ..  494177 +  -2.2  -4.24711   AGCGTTTGAGGCAAC                GTCA CCAT TGGC                 TTTATTGGCGTTTTC  57 32
        purE NONE
JN178_RS02155  497332 ..  497349 +  -9.1  -4.97158   CGCTAGAATACGCAT             CCGCTGT CTAG GCAGCGG              TTTTATTTAGTGTGC  91 56
JN178_RS02160 NONE
JN178_RS02165  498209 ..  498229 +  -5.6  -3.56643   TTGTATTTTGTTTTT            TTAATTCA TTTTC TGAATTAA            TTTAAGGAGTGTGAC  59 186
JN178_RS02170  498780 ..  498800 + -13.3  -5.39721   GGTGAATTATCTAAA            GGGTACAGC ATA GCTGTGCCC            TTTTTTGTATACTCG 100 87
JN178_RS02175  500059 ..  500082 + -15.4  -3.92178   CAAGAAACCAAAAAA          TAGCCGGGTT ATCT AACCCGGCTA           TTTCGTTGAACTAAT 100 75
        trxA  503800 ..  503818 +   -11  -4.99435   ATTTAAGATACAAAA             TGGCTTGC ATC GCAGGCCA             TTTTTAATTATTCCC  93 40
JN178_RS02200 NONE
JN178_RS02205  505922 ..  505954 +    -5  -3.21912   CCAAGTGTTCAGCTT      TTTTCATGGCTTTG ATTGG TAATGCTATGAAAA      TTAATGCCTTACAGC  54 49
JN178_RS02210  507470 ..  507495 + -16.3  -3.37245   TGTTTTTATTATTTA         TAAAGCCCAGC ATAT GCTGGGCTTTA          TTGATCTTGCCCTAC 100 73
JN178_RS02215 NONE
JN178_RS02220  509761 ..  509773 +  -9.1  -3.65351   AGTGCGCACTCTCAA                CACGG CCC CCGTG                TTTGGGTCAAGGTAG  75 287
JN178_RS02230  510889 ..  510909 +    -9  -3.06831   GATACTTTTACCTCT            GCCGCTTT TTTCT GAAGCGGC            TTCAATACCACTTGG  68 48
JN178_RS02245 NONE
JN178_RS02250  517603 ..  517619 +  -2.9  -4.11092   TTTTCTTGCCAACTT              TCCCG AATTTCA CGGGG              TGTTTTTCCTTCTTC  56 241
         alr  521426 ..  521452 + -13.1  -5.74684   GAGAGATACAAAAAA        GCCCGATG-CAC CTAG GTGTCATCGGGC         TTTTTATTTTTATTC 100 401
JN178_RS02290 NONE
JN178_RS02295  525623 ..  525641 +  -3.2  -3.61983   TGTTTATTCATCAAT             TAACGATA TAC TGTTGTTA             TTATGTATAAATTAG  51 70
JN178_RS02300 NONE
JN178_RS02305  528813 ..  528823 +  -2.4  -3.65812   GCAATAACATGCATC                 AGCG GTC CGCC                 TTGTATTCCAGGGAA  49 487
JN178_RS02315  530980 ..  530995 +  -4.7  -3.21934   TAAATTTCTCGATGG              TGGCA ACTAAG TGCCA               ATTTTCTAAAGGGCC  54 369
JN178_RS02400 NONE
JN178_RS02405  539152 ..  539163 +  -3.6  -3.61883   ATTAGGCAGTAAATC                TGGC AACT GCCG                 TATTCTTTGGATTTT  53 241
JN178_RS02465  547593 ..  547605 +  -5.5  -2.52464   AGCCTCTATATGTGT                TTGCC GCA GGCGA                TGCCTTACGGCAACA  50 361
JN178_RS02475 NONE
JN178_RS02505 NONE
JN178_RS02510  556079 ..  556091 +  -5.5  -2.52464   AGCCTCTATATGTGT                TTGCC GCA GGCGA                TGCCTTACGGCAACA  50 361
JN178_RS02540 NONE
JN178_RS02545  562127 ..  562140 +  -9.5  -4.11484   GCAGCCAACAAAAAA               GGGCC CGAA GGCCC                TTTTAAAAACTTAGC  82 46
JN178_RS02560  568137 ..  568160 +  -2.4  -3.76968   TTTTACCGTGCGTTG          GCG-CGACTTG CGA CAAGTTGACAC          TTTAATAAGTGCATT  50 59
        pepQ  569613 ..  569630 + -11.3  -5.06816   AGTGTATATTTAAAA             GAGCAGC TTAG GCTGCTC              TTTTTGTTGAGGCAT  93 53
JN178_RS02570  570740 ..  570750 +  -4.6   -4.6526   TCCCCTCAGCAAGGT                 CGTC ACC GGCG                 TTTTTACCCATTTCT  71 358
        rplU NONE
        rpmA  572845 ..  572860 + -11.8  -5.86976   ACAGGCTTAGAAAAA              CCCCGC GCTA GCGGGG               TTTTTTGTTTTGTGA 100 61
        cgtA  574329 ..  574345 + -10.1  -6.04953   AAACTCGCTTAAAAA              GCACGGT TCA GCCGTGC              TTTTTTTGTTTCTAT 100 118
        folA  574984 ..  575001 +  -9.1  -4.75776   TCATCTGACAAAAAA             GCCAGCG TAGT TGCTGGC              TTTTTGCGTTCAGTT  88 66
JN178_RS02655  586665 ..  586682 +  -9.9  -4.61482   GACTGATGCGTAATT             GCGAAGT TTCG ACTTCGC              TTGTTTTTTAGCCGC  89 246
        putA  590598 ..  590617 + -13.6  -5.10461   TATAACGACAAAAAA            GGCCAGCA TTTA TGCTGGCC             TTTTTATTACATCCA 100 53
JN178_RS02670 NONE
JN178_RS02675  594107 ..  594118 +  -3.6  -5.38549   TTCTAAGGTAAAAGC                CGCG TGGG CGTG                 TTTTTATTCTTTCGC  81 92
        rppH NONE
        ptsP  597817 ..  597831 +  -5.6  -2.99649   GTCACCTGAATTCGT               GCAAGC GGT GCATGC               TCTCTCTAGCAGTGT  53 76
JN178_RS02695 NONE
         lgt NONE
JN178_RS02705  600352 ..  600371 +  -5.8  -3.88396   CCCGTTGCGATATAA            GGAGCTACT ATG AGTA-CTCC            TATTTTAATTTGCGA  66 26
JN178_RS02710 NONE
JN178_RS02715  602383 ..  602409 +  -6.7  -4.66953   TCAAAACACCCAATA         TGCGCTTAAAT GGTAA GTTTAAGCGTA         TTTTTAAGCTCTTGA  77 48
JN178_RS02750  612508 ..  612518 +  -3.2  -4.41616   GACTTAAGCCATTGG                 GCTA ATC TGGC                 TTTATTTACCGGAGT  62 284
JN178_RS02755  613983 ..  614016 + -17.1  -3.68261   TGAAGGCTGTTCGCG     TGTTGTTCTGTTATT TTCT AATAACAGAACAACA      TTTCAACTGTTATAC 100 72
JN178_RS02760 NONE
        ccoG  617097 ..  617117 +  -5.3  -3.73859   TGTCGGGTCATATAG            CACGTAGGT TTG ACCGTCGTG            TTCTATCTTCTCATC  59 127
        prsT  624518 ..  624547 + -10.1  -5.09225   AGGGGTAATAAAAAA       GGCCACTTCAT TTATTATT GTGAAGTGGCC        TTTTTTGACTGAAGT  93 118
JN178_RS02795  625731 ..  625748 +  -2.5  -3.87373   TTTACACACAAAAAA             GGGCAGC TTTC GCCACCC              TTTATCGCGAGTCTC  53 79
        nudF  628116 ..  628128 +  -3.3  -2.91924   TATGTACCTCATCTT                CCTTC TAT GCAGG                CTTTGTGCGAGCTAA  45 61
JN178_RS02810 NONE
JN178_RS02815  629437 ..  629447 +    -4  -4.61868   AAACAAGAGAAGCAG                 TATG CAG CATA                 TTTTATATCTACATG  66 124
JN178_RS02820 NONE
        parE  632012 ..  632030 + -13.1  -4.50358   AAGATATCTCGACTA             CGCCGCG TTCTT CGCGGCG             TTTTAGTATTTGCAT 100 45
JN178_RS02835  634661 ..  634678 +  -6.9  -5.40004   CAACATAAAATAAAG             GGGGGCA ATTC TGCCCAC              TTTTTTACTTTGCTA  91 509
JN178_RS02845  634989 ..  635005 +  -2.3  -2.81584   TGGCACCAAGAAGCC              TGGTAAA CGC TTTATCG              CTTCTTCCATAATAT  40 108
         efp  636577 ..  636606 + -11.5  -6.07374   AGGGCAATTAAAAAA       CCGGTGTATCACGC AGC GCGTG-TGCATCGG       TTTTTTGTTTTTTAT 100 63
        epmA  637763 ..  637778 +  -6.2  -3.16267   TCACAGTATTTAAAG              TGTTAG CGAA CTAACA               TTAAATGTCGTTAAA  57 51
JN178_RS02865  640433 ..  640452 + -13.6  -5.83211   ATTATTAAGTGCAAA            GGCGGTGT ATTT ACACCGCC             TTTTTTGTTTTACTG 100 61
JN178_RS02870 NONE
JN178_RS02875  642145 ..  642166 +  -6.7  -3.94634   GTCCTCATAAGCGCG           CTTGTCTACG TAG CGTAGA-AAG           TTATTTACCGTGATG  68 444
JN178_RS02890 NONE
JN178_RS02895 NONE
JN178_RS02900 NONE
JN178_RS02905  646712 ..  646725 +  -2.3  -3.15999   CATGGAAAGTAACAA               CGCTG GTGG CAGCA                TTGACTATGTAGAAA  43 77
JN178_RS02910  647315 ..  647329 +  -4.2  -3.97622   TCACTATCTTGGTGG               CGATAG AGG CAATCG               TTGTGTTTTCGCTCA  57 70
JN178_RS02925  651332 ..  651359 +   -17  -5.93809   AAAGTAGGCAACGAA        GCCCGCACCAAC GAAA GTTGGCGCGGGC         TTTTTTTTGTCCCGA 100 290
        nirB NONE
        nirD NONE
JN178_RS02940  657212 ..  657236 + -10.2  -3.81575   CTCTCTTTGTCGTGG          GGTTAATAAG CGTGT CTTATTAACC          TTGTCATTTTTTGGA  81 42
        cobA NONE
JN178_RS02950  659305 ..  659358 +  -5.8  -3.33261   CTGCCTTAGTCTTGA CAT-ACACATGG-GTATAATTGTTAAT AGT ATTAACAAG-GTACTCCATGTGTGATG TTATGCGACTTGGGC  58 58
JN178_RS02955 NONE
JN178_RS02960  662545 ..  662560 +  -2.5  -4.08394   ATTTCAGTTCTATTT              TCGGC ACGTGC GTCGA               TTTTCGGCACGCTCT  55 119
JN178_RS02965  664342 ..  664380 +  -6.9  -6.11644   AACCTGGCAACGAAG CCCACCAAGC-G-CGACA GTTAAG TGTCGACAGCT-GGTGGG  TTTTTTTTTGGCTAC 100 414
JN178_RS02970  665820 ..  665853 +  -4.5  -2.65884   GTTCTTTAAGGTAAA     TAAGGCGGCCTTG TAAAGAGT CAAGGCCGTCAAA      CTTGTAAGTTCATGA  47 32
JN178_RS02975 NONE
JN178_RS02980  667867 ..  667878 +  -2.2  -2.90075   TGCCATTTTTATTGG                GTAG GGCG CTGC                 TATGCTTAAAAAAAC  42 102
JN178_RS02985 NONE
JN178_RS02990  670053 ..  670066 +  -2.3  -4.44355   AGGCCAAAAATTCGT               TTGGC TGCG GCCAC                TTCTTTTTCGGCTTG  59 303
JN178_RS03020  676761 ..  676804 +  -2.4  -2.54617   GTTCATTCAAGACGC TCGCGTCAACTAGAGT-TCAT AAC AAGACGCTCTAGTACACGCGC ATAATTTTTGGAGTA  39 13
JN178_RS03025  677504 ..  677521 +  -8.4   -4.7497   AAATAGCAACAAAAA             GGTCGC CCTAGA GCGACC              TTTTTAGTGCGTACA  87 101
JN178_RS03035 NONE
JN178_RS03040  681184 ..  681202 + -14.6  -4.01493   CTGTGCGCATTAAAT             GCCCGTAC GTG GTACGGGC             TTTAATCTCTTTTAT 100 2
JN178_RS03060 NONE
JN178_RS03065  688214 ..  688239 +  -9.8  -5.16071   CATGCTCTACTTACA         GCGAGCGAAA TTTCTT TTTTGCTCGC          TTTTTATTCATACTT  93 48
JN178_RS03070  689097 ..  689109 +  -3.3  -4.55798   GAACGACAGCGTTCG                CGTAG TTG CCACG                TTTTAATTTACCGTC  64 7
JN178_RS03075  690340 ..  690362 + -16.4  -5.16237   TTTTAATATAAATAA           GGCCTTACAC TTG GTGTAAGGCC           TTTTTTGCTAAAGTT 100 35
JN178_RS03080  692123 ..  692141 + -13.2  -5.64274   AAGATGAATTGAAAA             CGCCTCTT TCA AAGAGGCG             TTTTTTTATGGGTAA 100 56
        tsaD NONE
JN178_RS03110  699946 ..  699971 + -11.1  -3.89695   CCCACACTTTACTTT         CATTGCCTGCC AATA GGCGGGCTATG          TTGTCTTTGTGGCGC  86 53
        folB NONE
        folK NONE
JN178_RS03130 NONE
JN178_RS03135  702996 ..  703021 + -11.1  -4.06505   TCAAGCAATAAAAAA         GCGCCTCATGC TTTA GCATGTGGTGC          TTTGTAATATATTAA  86 93
JN178_RS03145  706108 ..  706127 +   -10  -5.24129   CTTGATTAGCACAAA            GCCGATGT CTTA GCATCGGC             TTTTTTGTAGGAAGA 100 53
JN178_RS03155  708237 ..  708288 +  -3.7  -3.19513   GGTGATCTCTTCGCT GTCTAGCGGCTGATTCTTGCAGCG GATCA CGCTTCCAGTATCATCAG-TAGAC TTAAATTCAGCTTCT  48 301
        phoB  711667 ..  711693 +  -7.2  -3.85859   AAGCTTTAAGCTTGA         GGGGATGGGGTG CTG TGCACCATTCCC         TTGTATTTACGTCTT  70 32
        phoR NONE
JN178_RS03180 NONE
JN178_RS03185 NONE
JN178_RS03190  719200 ..  719223 + -13.2  -4.66537   GCAATACACAACAAA          GCTAAGGCGT AATT GCGCCTTAGC           TTTTGTGTTAAAGCA 100 50
JN178_RS03195  721976 ..  721996 + -12.6  -5.06505   TTCTAATTTTACCAA            GGCCCAGT TTTAC ACTGGGCC            TTTTTGTATGTCCTT 100 35
JN178_RS03200 NONE
JN178_RS03205 NONE
JN178_RS03210 NONE
JN178_RS03215 NONE
JN178_RS03220 NONE
JN178_RS03225  727220 ..  727237 + -11.3  -6.23545   ATTAATTACAAGAAA             GGTCACC AAAT GGTGACC              TTTTTTTTATTTGAA 100 55
JN178_RS03255 NONE
JN178_RS03260  739203 ..  739222 + -13.6  -5.59534   AACCAAATATTGAAA            GCCCCAAC CTCG GTTGGGGC             TTTTTTGTTGTGATT 100 55
JN178_RS03265 NONE
JN178_RS03270  741524 ..  741537 +  -3.1  -2.95774   GCTGACCTTAAAAAG               CGAAT AAAG GTTCG                TATATCGTAGGTGTA  45 107
JN178_RS03275  742753 ..  742766 +  -3.1  -4.77165   CAACTCCAATAACAG               CGGAT GTTA ATTCG                TTTTCTTATACCAAA  67 29
JN178_RS03285  744087 ..  744136 +  -5.8  -3.08211   AGCAAGGTATACATC GTAGCCCAAGCAGGTTCATTGA ATCGAC TTAATGGATTTGCTTGGTCAGC TAATTTTCAGAAAAT  57 108
JN178_RS03290  745338 ..  745362 + -12.8  -5.24129   TGTATAAACTACAAA          GCCGGTGGCC CTATA GGCGACCGGC          TTTTTTATGGCGAAA 100 125
JN178_RS03295  745852 ..  745868 +  -8.7  -3.82191   TAAACGCGCGATTGT              GCTGGCT TAA AGCTAGC              TTATTCTGGAGTTAA  76 48
        lysC  747264 ..  747283 + -13.6  -6.04378   TTGTTTTATCGAAAA            CGGCCAAC TAAT GTTGGCCG             TTTTTTTTATGCTTT 100 51
        djlA NONE
        xerD  760185 ..  760223 +  -7.4  -2.71712   GGCTAGTTTGCACGG   AAGCTCACGATCAAAGCG CTT TGCTATGATTGTGAGCAG   GTTTGCGACAAGCGG  59 35
        dsbC  761172 ..  761200 + -11.9  -4.86001   TTACATTATTTTAGA        TAAAAAACGCACG CTT TGTGCGTTTTTTG        TTTTTCTGCGGTACT 100 50
        recJ NONE
JN178_RS03365 NONE
        recO  764116 ..  764137 +  -2.9  -3.05715   TATTCATGCCCAAAA           GT-CGCTAGC ATA GCTCGCGCGC           TTAACTCGCGCACTT  44 18
        pdxJ NONE
JN178_RS03380 NONE
        rlmD NONE
        relA NONE
        mazG  770369 ..  770382 +  -8.1  -3.29263   CTTCGAGGGTGACTG               GGTCG ATAT CGACC                TTGTGCGCGCGGTCT  65 366
JN178_RS03410  774439 ..  774450 +  -7.2  -3.00946   CTGAAAAATAGTAAT                CGCC TTGG GGCG                 TAATTTCTGCAAAGG  60 274
        rplM NONE
        rpsI  790206 ..  790221 + -11.8  -5.60689   TTTGTATTGCAAAAA              CCCGGC TTAT GCCGGG               TTTTTTATTATCTCA 100 52
        petA  791229 ..  791241 +  -3.3  -3.02402   AACTGTTATTATCGG                CTCAG AAG CGGAG                GTTGTTTAATATGAA  45 4
JN178_RS03510 NONE
JN178_RS03515  793277 ..  793293 + -10.8   -5.1361   TGTATAATACCAAAA              GGGGGC TTCTC GCCCCC              TTTTTTGGCATTTGT  93 54
        sspA NONE
JN178_RS03525  794476 ..  794504 +  -7.5  -2.77235   AATAAATCGATGTAG        CCTGGTTTCAATA TTA TGTTGAAGCCAGC        TCATTGCATCGTTAC  62 36
JN178_RS03540  797342 ..  797355 +  -8.1  -2.71831   GTCAGGATAACGCTA               CCTGC TAAT GCAGG                ATCTATTTTTAAGCG  60 124
        mlaF NONE
        mlaE NONE
        mlaD  809350 ..  809360 +    -4  -3.21595   GTTTTAGGAGAGTTA                 CTTT GAA AAAG                 TTAATGGTAGCAATT  48 127
JN178_RS03620 NONE
JN178_RS03625 NONE
JN178_RS03630 NONE
        murA  811970 ..  811984 + -12.8  -5.38249   GCCAACAAGTAAAAA               GCGCCC ATC GGGCGC               TTTTTTATACTTGCT 100 97
JN178_RS03655 NONE
JN178_RS03660  817604 ..  817620 + -12.3  -5.00339   TAAGCGATTAAAAAA              GCCCTCT TCT AGAGGGC              TTTTTCGTTGTTAAT 100 49
JN178_RS03685  822034 ..  822065 +  -4.4  -4.52949   CGTTCTATATACTCT      GGCGAAGCACATAA AATC TTATGTACCTCTCC       TATTTTTTTTGCAAC  69 468
JN178_RS03695 NONE
JN178_RS03700  824184 ..  824201 + -12.7  -6.13503   CCGTTCCCTTTTTAA             GCGCAGC GCAA GCTGCGC              TTTTTTTTATTAATG 100 62
JN178_RS03705  825595 ..  825635 + -10.6  -3.75578   ACAAGATTGTACCCA C-CACCATTGCGGTTTTCGC GGC GCGAA-GCAGCAATGGTGAG TTGTCTCTTATGTGT  85 162
JN178_RS03750  830605 ..  830622 + -11.3  -5.02074   TGGCAATTATATAAA             GCCCTAG ACAA CTAGGGC              TTTTTTAGGCGGTAA  93 57
JN178_RS03755 NONE
        secD NONE
JN178_RS03765 NONE
        rnpB  836031 ..  836044 +  -3.9  -3.96291   TTGCATTGTCGGGAT               TAACT AAGT AGTTA                TTTATACAGTTTGTA  57 383
JN178_RS03780  839678 ..  839690 +  -9.1  -2.67016   TATGCAATAGCAATC                GGCAG CAA CTGCC                TAGCTTTGCATGATT  67 166
        rsgA  841156 ..  841172 +  -3.7  -5.20781   AATATAGAACGAAAA              TATGAAC ACT GTTCACA              TTTTGTTTTGTAGTA  76 375
JN178_RS03790 NONE
JN178_RS03795  843097 ..  843115 +  -2.4  -3.36401   AGTCAAAGTGTAAGA             GATAAAGT AAC GCTATATC             ATTTTGGTTTATAAA  45 105
JN178_RS03800  843638 ..  843667 +  -8.7  -3.30124   CGTTAACTACAATAA       GCTGTATGAAAAG ATGA TTTTACATACAGC        TTCTACCAGGTCAGG  72 183
JN178_RS03825  853844 ..  853857 +  -3.1   -4.4648   CAAGTGTTTGCTGTT               TAAGC AGTA GCTTG                TTTTCTCATGCAGCT  62 232
JN178_RS03830  855468 ..  855479 +  -2.2  -3.57263   TTTTGCCTAAGGCTT                GCAT TAAT GTGC                 TTTCAGACTGGAAAT  49 274
JN178_RS03850  861349 ..  861363 +  -4.2  -3.74693   TAATGACAAACATGT               GAAGCT TAT AGCTGC               TTTCATGGCATGCGA  55 489
JN178_RS03860  862233 ..  862248 + -10.4  -4.78848   ACAGCCATAAAAAAA              GCAGCC AGTT GGCTGC               TTTTCTCTTTAAACG  91 100
         tkt NONE
         epd  866846 ..  866879 + -13.9  -3.62478   AAAATAAGCATTGAT     GCTGCCACGGGTTGGT AGC ACCAGCCCGCG-CAGC     TTTCACAGTTAATTA 100 34
JN178_RS03880  868255 ..  868286 +  -7.3  -2.79878   ATAAAAACAAAATGA      GCTGCGCTTTTAA CAGCAA TCATAAGCGCAGC       CTTTAAATCGGTAAC  60 122
JN178_RS03885  869310 ..  869342 + -15.8  -3.37071   ACACTTATAGTTGTC      GCTAAAGGGAAGAG AAACA CTCTTCTCTTTAGC      TTATAGATAGGCTTT 100 40
JN178_RS03895  872200 ..  872230 +  -3.1  -4.68593   AGTGCGTTGATGCAA      AGGGGGC-GCTACC AACA GGTTGAAGCCCCCA       TTTTTGCATAATGCG  64 63
JN178_RS03920 NONE
        pstA NONE
        pstB NONE
        phoU  882902 ..  882923 +  -7.3  -2.66912   AATCTTGTCCAATTG           GTCAACGCA ATTT TGCGTTGAA            TAGTCTAAATTCAAT  59 39
JN178_RS03940  884543 ..  884568 + -15.5  -5.40464   CCGATAATACAAAAA         TGCCGCTAAGG GGAA CCTTGGCGGCA          TTTTTATTTGTGGTG 100 68
JN178_RS03950 NONE
JN178_RS03955 NONE
JN178_RS03960 NONE
JN178_RS03965  889232 ..  889267 + -12.6  -2.70932   TGCAGTAATCTAAAT    GCGTGGCGCAGTGTGAC CAA GTTCCGCTGC-CCACGC    TAATTCAGAGCGCAA  89 41
JN178_RS03985  891760 ..  891784 +  -6.5  -2.64472   GTGATTCCTAAAGGC          TTGATAACATG AAC CGTGTTATCAC          TACCTTTAGGAAGTC  56 81
JN178_RS03990  893786 ..  893801 + -10.4  -5.37593   AGACAAAGAATCAAA              GCAGCC CTAG GGCTGC               TTTTTTACTTTCAGA 100 66
JN178_RS03995  895726 ..  895736 +  -5.4  -3.44622   TTTACCACACTTTTC                 GTAG GTG CTAC                 TTCATTGTGCCGATC  57 174
JN178_RS04000  896509 ..  896534 +  -6.1  -2.89564   TTTATGTGCATATCT         ACACAGTGGGA ATAA TCGCACTGTGC          TATATCGCCTGAAGC  55 141
JN178_RS04010  898628 ..  898641 +  -6.7  -3.06831   ATAAGTTTAGCAAAT               TGCAC ACAA GTGCA                TTCACTAAACATTAC  60 223
JN178_RS04015  899027 ..  899061 + -11.6  -2.56715   TGGCGTACCGTAACC     TTGCCCATTCACTA ACAATCA TCGTGAATGGGCAA     TGGCTTGCTCAACAT  81 43
        sbcD NONE
JN178_RS04025  904444 ..  904464 +  -6.1  -3.29511   TTAGAGAAACAATAC            GCGGTGG GGTAGAA CCACTGC            TTATAGGGGACTCCG  58 14
JN178_RS04030  905998 ..  906015 +  -5.5  -4.12456   ATATCAGTTGCTACA             GCGTCAT TAAT AAGACGC              TTTTGGACGTAGTGT  65 47
        sstT  908345 ..  908371 + -15.2    -3.052   TCACTTCAAAAATAA         GTCGTGCAGCCA GCT TGGCTGTGCGAC         TGTCTATATCAAACT  93 54
        hutC NONE
JN178_RS04060 NONE
        hutH  914866 ..  914877 +  -5.8  -3.92324   GCAAAAATGTAATAG                GCTG GGGG CAGC                 TTTAGTATTAGGGAG  66 101
JN178_RS04070  915430 ..  915463 + -10.3  -2.78384   ATTGCGCTTAGTGCA     GTATCATCGTCAGTC AATG GGCTGTCGCTGATAC      TGTCATCAAAAAAGG  71 74
JN178_RS04085 NONE
        nagA  919153 ..  919163 +    -4  -2.85013   GGACCACTACAAGGA                 TTCA CAA TGAA                 GTTATGTTCTCAGAT  45 78
JN178_RS04095  920138 ..  920165 +  -2.6  -4.99043   GAGGCTTAACAAAGT        CGCCTCACACAA GTAT TGGTTTTAGGCG         TTTTCTTTGTGAGCC  67 87
JN178_RS04115  927171 ..  927187 +  -3.7   -4.6902   TAAACAGTGGCTGCG              TAACGAA ATG TTCGCTA              TTTTTGGCATTGTCG  66 42
JN178_RS04130 NONE
JN178_RS04135  931511 ..  931523 +  -2.7  -3.70446   AAGATCATGAGTGTT                CAAAT ACG GTTTG                TTATCTTACGTATGG  49 118
JN178_RS04140  932675 ..  932691 +  -7.3   -3.0264   ATAAGCTTCCTCCTA              TGTATGC ATT GCATACG              TATTCAGCCCACTTT  61 52
JN178_RS04145 NONE
        pulA  937561 ..  937587 +  -8.6  -5.80364   TTCCCGACGTAAAAA         CGGGCTAGGCTT TTT GGGGCTGGCCCG         TTTTTTTATTGGCAT 100 59
JN178_RS04165 NONE
JN178_RS04170  941774 ..  941789 +  -6.2  -2.95388   AATTATCACGATAAA              TCCTAT ACTA ATAGGA               TGTCTGAATTCACTG  56 394
JN178_RS04175 NONE
JN178_RS04180 NONE
JN178_RS04185  944856 ..  944879 +  -3.2  -2.57132   CAATCACAAGCGAGC          GCAAGTATAA GCAG TTTTATTTGC           CTTGTCACGCCCCAC  43 514
JN178_RS04200 NONE
JN178_RS04205  949778 ..  949790 +  -4.1  -3.66589   TTTTTTACTCAATTG                CTACA TTT TGTGG                TTATACTTTGTACTT  53 44
JN178_RS04210  950257 ..  950271 +  -8.6  -3.05964   CTAATAACGTAGAGT               GTGTGT TGT ACACAC               CTGTTTTGTTTATGG  70 37
JN178_RS04220  951564 ..  951585 +  -6.6  -4.56775   TAACCCTGGCGATTT           GG-GCTGCA AAGCC TGCAGCTCC           TTTTTCACCCAGGCT  77 53
JN178_RS04225 NONE
JN178_RS04230 NONE
JN178_RS04235 NONE
JN178_RS04240 NONE
JN178_RS04245 NONE
JN178_RS04250 NONE
JN178_RS04255  957859 ..  957878 +  -9.3  -4.89063   CTTTTACTCTGAAAA            GCACGCA CTATAA TGCGTGC             TTTCTTTTTAGCTCA  91 140
JN178_RS04260  958758 ..  958774 + -12.3  -5.50925   GGTTCAAAAAAGAAA              GCCCGAT TAA ATCGGGC              TTTTTTGTATTAATT 100 16
JN178_RS04295 NONE
JN178_RS04300  966399 ..  966413 +  -4.3  -4.28774   CTGCGATAGTGCCGT               TGATG AACTA CATCA               TTTTGCGTTAAATCC  64 431
JN178_RS04315 NONE
JN178_RS04320  970428 ..  970453 + -11.2  -5.52347   CTTAATCGAAAAAAA         GGCCACATGCG TTTAT CGC-TGTGGCC         TTTTTTAATTTTATT 100 48
JN178_RS04355  981208 ..  981220 +  -6.3  -4.48877   AAGATTTAGTTTTTT                TTGGT TTT ACCAA                TTTTGTGCGTGTTTA  72 94
JN178_RS04360 NONE
JN178_RS04365 NONE
JN178_RS04370  986910 ..  986920 +  -2.4  -2.90941   TTACACGCTTTCAAG                 CCGC TTC GCTG                 TATATGCGCTGTAAT  42 1
JN178_RS04375 NONE
JN178_RS04380 NONE
JN178_RS04385 NONE
         eda  990348 ..  990361 +  -6.7   -2.6162   CTTCGACGCAGATTA               CCCTA TTTC TAGGG                CTGTTTCACAACTTG  56 78
JN178_RS04395  991968 ..  991983 +  -5.4  -2.62192   CCTATTTGGTAATTT              TCGCCA GTCG TGGTGA               CTTGATTAACTGACA  50 509
JN178_RS04410  999169 ..  999200 + -18.2   -5.0538   CGCACATAACAAAAA      GCCCCCATAATTGA ATGT TCAGTTATGGGGGC       TTTTTTGCAGTGAGG 100 95
JN178_RS04435 1007042 .. 1007066 +  -6.5  -3.16055   TGCACATATCATTTG          GTAGTGTTATT GAT AACAACGCTAC          TTAATACAGAATTTA  60 79
        recA 1008180 .. 1008196 +  -9.4  -5.76633   CATATAATTAAGAAG              CCCACC GTTTA GGTGGG              TTTTTTTATGTGTAC 100 52
JN178_RS04445 NONE
JN178_RS04450 1010475 .. 1010498 +    -6  -5.84381   GCGATAAATAAAAAA          CCGTTTTGTG CTAG TACTAAACGG           TTTTTTTATTAGTAC 100 77
JN178_RS04475 1015874 .. 1015893 + -13.6   -3.5486   TATACGTTTAATTAT            TCCCTCCC AGCC GGGAGGGA             TCTTTCCTTGAAGTA 100 97
        ccmA NONE
        ccmB NONE
JN178_RS04500 NONE
        ccmD 1021157 .. 1021177 +  -5.3  -5.63374   GAATAAAGTTCAAGA            AGGCACATC ACC GAGGTGCCA            TTTTTTTAGTATTAG  86 88
        ccmE NONE
JN178_RS04515 NONE
JN178_RS04520 NONE
JN178_RS04525 NONE
        ccmI NONE
JN178_RS04535 1027018 .. 1027038 +  -4.8  -4.10161   AGACGATATAGACAA            TAAGTAGA TGCGC TCTACTTG            TTTTCACCGCTGATA  63 19
        wecA 1037098 .. 1037113 + -10.4  -4.14576   TGCTGTTTTTAAAAA              GCGCAG TGTT CTGCGC               TTATTGTGTTTTTCC  85 83
JN178_RS04590 NONE
JN178_RS04595 1039140 .. 1039150 +  -3.2  -2.74563   ATCTTGAAAATTGGC                 CACG AAA TGTG                 TCATTGGCGTGTGAC  44 261
        galU 1040118 .. 1040135 + -11.3  -4.84918   AACTCCTATTGAAAA             TGCGCCT ACTT AGGCGCA              TTTTATATTTCTACG  91 57
         syd 1049048 .. 1049062 +  -8.6  -3.90291   TAGTCGGGACGTGCT               GTGAAC CTA GTTCAC               TTTCCTTCGACGCAT  76 161
JN178_RS04650 1050042 .. 1050059 +  -4.9  -3.72576   TTAACATTTGTTGTT             TTTTAGC GTAG GCTAAAG              TTTAATCAAGGGCGC  60 199
JN178_RS04655 1050887 .. 1050907 +    -4   -4.6955   CGGTCTCAGAAAAGT            ATGTTGGT GAGCG ACCAACAC            TTTTCTGTATTCATC  68 69
JN178_RS04670 NONE
        truC 1054432 .. 1054445 +  -2.5  -2.52543   CGCTTGTTGCGAAAG               TAATA AATT TATTA                TGAATTAAAAGAGGT  41 64
JN178_RS04680 1054926 .. 1054942 +  -9.4  -4.62783   GTAAAGACAAAAAAA              TGGCGC GTTAA GCGCCA              TTTTTCGGATAAATC  88 37
        rpsB 1060762 .. 1060777 + -11.8  -4.18197   CGAGACGTATTGAGA              GGGGCG GTAT CGCCCC               TTTTACCTAACGAAT  90 89
         tsf 1061741 .. 1061758 + -11.3  -5.28176   TAGATAAACTACAAA             GCACCTC ATTT GAGGTGC              TTTTTTATAGCTGCA 100 73
        pyrH NONE
         frr NONE
        uppS NONE
JN178_RS04725 NONE
JN178_RS04730 NONE
        rseP NONE
        bamA NONE
JN178_RS04745 1070637 .. 1070667 + -11.3  -5.05153   CAGGCTATAATATCT       TCAGACCAATACT CAAAA GGTGTTGGTCTGA       TTTGTTTTTTACGCT  93 70
        fabZ NONE
        lpxA 1072004 .. 1072019 +  -2.5  -2.82623   CCTTAAAAATGCACA              GCGAG GCATTA TTCGC               TAATTATGACAAGGC  42 7
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA NONE
        tilS 1079633 .. 1079654 +  -2.1  -3.07487   CATAGCACAACAAGA           GAGCGGCAG TTTT TTGCCGCAG            CTTTTACCGCTCTAA  43 57
JN178_RS04790 1082854 .. 1082865 +  -5.8  -3.07895   GGCAGCTAGCGCGAA                GTGC AATC GCAC                 TGTGTTAGCAATAAA  57 32
        tadA 1084270 .. 1084290 +  -3.9  -4.76213   TCAGTTCAGCGTGTT            GCGAGCTTA AAT TAAACACGC            TTTTGTTCAGTTTAT  68 244
        purL 1090031 .. 1090041 +  -5.4  -3.27475   CTCTTGTCAATAGCG                 GATC TCT GATC                 TATTGTAGTGCAAGC  56 193
JN178_RS04815 1090312 .. 1090353 + -15.3  -3.54424   AGTCTGAAAGAAAAA T-TCTAACGCCCGTAGCAGG TTT CCTGCTACGGGCGTTACTCA TTTAGGGGGCTAAAA 100 39
JN178_RS04825 1091926 .. 1091944 +  -2.5  -4.46112   GATGCCTTGGAGTAG            TATG-CAG ACAA CTGACATA             TTTGTTTGGGTAGGC  63 245
JN178_RS04855 1099011 .. 1099024 +  -2.4  -3.91716   GGTTTACCTTTCTTA               TCGT AAGTCA ACGA                TTCTTTGGCGCGTAA  53 100
JN178_RS04875 NONE
JN178_RS04880 NONE
        flgB NONE
        flgC 1103737 .. 1103759 +  -4.2  -2.55668   GTGCTTCAACTCGGT          CAAG-GGCA ATAATC TGCCGCTTG           GTTAATGTGAGGATA  47 14
        flgD NONE
        flgE 1105935 .. 1105956 +  -9.4  -5.02777   TTCATATTAATTCAC           GAGGTCGC CTCTGC GCGGCCTC            TTTATTTTTCTATAT  91 94
        flgF NONE
        flgG NONE
        flgH NONE
JN178_RS04920 NONE
        flgJ NONE
        flgK NONE
        flgL 1113822 .. 1113835 +  -3.1  -2.67513   GCCAGTTATTTTAAT               CATGT AAAC ACGTG                CTTCCTTGTCGATAT  42 64
JN178_RS04945 1115906 .. 1115928 + -12.1  -5.63857   CGAGATAACTTAAAA           GCTGACACT GATGA AGTGTCAGC           TTTTTTTGACTTTTT 100 84
JN178_RS04950 1117598 .. 1117620 + -14.2  -5.95946   TAACGTGAGCAAATT           GGCCGAGATA AAT TGTCTCGGCC           TTTTTTTATTCTTAC 100 225
JN178_RS04955 1119047 .. 1119075 + -12.5  -4.62168   TTAATTGAGATGTAA        CGGGTGTTTGCTT TTT GAGCAAGTACCCG        TTTTGTCGTTTCAGT 100 61
JN178_RS04960 NONE
        fliD NONE
        fliS 1121494 .. 1121506 +    -2  -4.07687   AAAACGACAAGCTGT                TTGA AAAAC TCAA                TTTTAAACCACGAAT  54 22
JN178_RS04975 NONE
JN178_RS04980 NONE
JN178_RS04985 NONE
JN178_RS04990 1127760 .. 1127778 +  -5.2  -5.03314   TTACAAAGCTAAGGT             GTGGGACA CTA TGACTCAC             TTTTTTGGCAATGCG  79 420
JN178_RS05075 1144076 .. 1144089 +  -8.1  -5.84381   TATTATTCGAAAGAA               GCAGG GCAA CCTGC                TTTTTTTATTGGTAA 100 56
JN178_RS05080 1145661 .. 1145688 +   -15  -4.23647   CAACGCACTGAAGAT        GCGTAACGTCAG GGTT TTGACGTTACGC         TTTATTCCCTAATTT 100 20
JN178_RS05085 NONE
JN178_RS05090 1148365 .. 1148394 +  -3.5  -5.74288   TGGTTTCATAGCCGG       CCGTCGCCTTTGTA GTT TACTG-GGTGGCGG       TTTTTTGTTGTTTCT  88 91
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1154390 .. 1154409 +  -3.5  -3.34894   ATTTAAATACCAGTT            GGCGC-GC CCTTT GCAGTGCC            TCTTTAAAGACGATT  48 112
JN178_RS05125 1156785 .. 1156798 +  -2.5  -3.93236   AAAGGCGGTATCGAT               TTTTA TGCA TAAAA                TTTGTCCGCTTGATA  53 14
        fliL NONE
        fliM NONE
        fliN 1159047 .. 1159067 +  -6.7  -3.54488   CTTCTTATTTACTAA            GGGGTTGCG CAA TGCTGCCCC            TGTTATTTAGCCAGG  63 43
        fliO 1159488 .. 1159502 +  -4.2   -3.8579   ATCAAAAGGACGAAT               CTTCCG ATG CGTAAG               TTTGCGTTGTTAACT  57 12
        fliP 1160256 .. 1160275 +  -2.8  -3.88291   ATGGGCGTCTAGGAG            GGCTTATG TCAC CAGAAGTC             TTTGTCGAAATACTC  53 29
        fliQ 1160506 .. 1160531 +  -2.7  -2.63702   GTTTCGCATGGTTGA         TTTAATTCCACA AGT TGTGG-GTTAAG         GCTTTTCTTACGTGG  41 1
        fliR 1161451 .. 1161462 +  -5.8  -3.56568   TGCGGTGGCAGAGCG                CCCA AGGA TGGG                 TTTACAGCGTGCTTG  62 154
        flhB 1162626 .. 1162647 +  -8.7  -2.91395   AACGGGATTTGCCTA           TACCACCTG AATA CAGGCGGTA            ATTTCTAGGGGGGAT  69 3
        flhA NONE
        flhF NONE
JN178_RS05180 NONE
JN178_RS05185 1167931 .. 1167942 +  -5.8  -2.81208   TAATAACAATTAACC                CCTC ACTG GAGG                 CTATTTTGGATAAAA  54 45
        cheY NONE
JN178_RS05195 NONE
JN178_RS05200 1171359 .. 1171374 +    -4  -2.82516   GCGTTACGCCCGTAA              GCCCATA AAG TA-GGGC              TGTAATAATAGGAAA  45 13
JN178_RS05205 1172523 .. 1172535 +  -4.8  -2.80113   ATACAATCTGAAATG                CGCT AGACA AGCG                TGTAATGGAATAATA  50 20
JN178_RS05210 NONE
JN178_RS05215 NONE
JN178_RS05220 1174643 .. 1174667 + -10.1  -5.46129   CATTTAGTAATTTAA          GGCACTAAC TTACACT GTTAGTGCC          TTTTTTCATTTCTTC 100 34
JN178_RS05225 1175178 .. 1175189 +  -4.4  -3.75738   ACGTCTAGACGTAAA                GATG TTGA CATC                 TTCTTGGTAATAGTC  57 71
        metA NONE
JN178_RS05235 NONE
        metH NONE
JN178_RS05245 1180570 .. 1180583 +  -3.9  -2.71791   AGCTGATTCTCGTAA               TTTGA AACA TCAAA                ATTTAACAAGAGCGT  45 106
JN178_RS05250 NONE
JN178_RS05255 1183022 .. 1183041 +  -2.8  -4.37886   TCTTTTCTCTTTGTA            TAACACCT CTTT AGGTGCTG             TTTTCTGCCAAATCG  60 167
JN178_RS05260 1185185 .. 1185224 +  -4.2  -2.90212   GATTTAATTCACGCC  TAAACCGCGGTGTTACTG AGGG TGGTGACACCGCGACATA   TCTATAAACTCATCG  49 34
JN178_RS05275 NONE
JN178_RS05280 1189533 .. 1189550 + -12.7  -5.98781   CTTTCCCTTTACTTT             GCCCTCC CTTT GGAGGGC              TTTTTTTTGCTTATC 100 53
        betI 1192853 .. 1192873 +  -9.7  -5.31456   TTCACTAATAAAAAA            GGTAGGCGT TTA AAGCCTACC            TTTTTTGTAACTTGC 100 73
JN178_RS05305 1196867 .. 1196884 +  -4.8  -4.15006   TATCCGTGATATCGT             TGCGCA AATCTG TGCGCG              TTTTACGATACGTGT  63 124
        alaS 1199602 .. 1199614 +  -3.4  -2.84617   AAGCTATAATTATTT                CTGT ATATA ACAG                TGGGTTTTTGAAGTG  44 32
        csrA 1199945 .. 1199962 +  -9.1  -5.28176   TCTTCATAGTGAAAA             GGTCAGC TATA GCTGGCC              TTTTTTGTAGGTAAA 100 52
JN178_RS05320 NONE
JN178_RS05325 NONE
JN178_RS05330 1200609 .. 1200650 + -17.7  -4.41616   TCCTTCCACACGCGC CATATAAGAAAACCCACCTC ATT GAGGTGGGTTTTTTT-TATG TTTGTTTGGAAAGAT 100 24
JN178_RS05335 NONE
        oadA NONE
JN178_RS05345 1204365 .. 1204394 + -20.9  -3.40141   CTAAAAACGACATAA       TGAAAGGGCGGCT GCGA AGCCGCCCTTTCA        TTACTTGCCCTTTTC 100 61
        pspA NONE
        pspB NONE
        pspC 1212669 .. 1212687 +   -11  -5.79595   GTAATAACTCACAAA             GCCGCTTT CTA AGAGCGGC             TTTTTTGTTTTCGAA 100 48
JN178_RS05395 1213682 .. 1213707 + -10.5  -4.32857   AATGTACTTTTTATA         GGATGCCGC-TC GAT GACGCGGCATTC         TTTGTATTTGAAAGC  87 66
        tyrR 1215461 .. 1215489 +  -3.2  -3.66999   AAATCAGTCTCTCAA        CGCGTGTT ACGTTTTATTTAC AACACGCG        TTTCCCTCAATAAAT  51 84
JN178_RS05405 1216740 .. 1216752 +  -6.3  -2.50077   CCACAACCATTTTAA                CTAGA AAA TCTAG                GTGGTTTTATGAGCA  53 102
        maiA 1217445 .. 1217495 + -19.3  -4.93296   ATCCAGAATAAAAAA GGCCGCATT-TGGAGTGACTCTAA AACG TTAGAGTCAAACCACAATGCGGCC TTTTTGTGCTAATCA 100 56
JN178_RS05420 1219315 .. 1219336 +  -8.6  -3.61609   CAAATAGTCATAATG           CGCCCCGC ACTGAC GCAGGGCG            TTATCATTTAGATAA  74 52
         ffs 1219854 .. 1219870 +  -2.9  -4.82901   TTGCTTACAGTCATT              TGTGCCC AAT GGACATA              TTTTTATACAACACA  65 396
JN178_RS05435 NONE
JN178_RS05440 1222406 .. 1222429 +  -8.2  -5.80727   ACGCGTAGTGTGAAA          GGCAGAAATG GCTT TGTTTCTGCC           TTTTTTATTCTTTTT 100 40
JN178_RS05445 1223962 .. 1223978 + -10.8  -5.75478   CCATTTTCACTAAAA              GGGGCG TGTAT CGCCCC              TTTTTTTGTCTGCTT 100 69
JN178_RS05450 1227213 .. 1227230 +  -8.4  -5.65177   TAAAGCATCTAAAAA             GCCAGC CGAAAA GCTGGC              TTTTTTTATGCCTGT 100 57
JN178_RS05455 1229437 .. 1229459 +  -8.5  -2.56596   TATACTACGTTCGTA           GTACTGACG ATTGA CGTTAGTAC           TGCATTCCTGAAACA  65 247
JN178_RS05460 NONE
JN178_RS05465 NONE
JN178_RS05470 NONE
JN178_RS05475 NONE
JN178_RS05480 NONE
JN178_RS05485 1234522 .. 1234559 + -14.3  -3.87149   TAATTCCGCGCATTA   GCGAAAGAAAAGCCTCC TTAT GGAGGCTTTTTTATTGC    TTTCAATTTAGTGAA 100 38
JN178_RS05495 1237358 .. 1237394 +  -7.2  -3.14931   TTAACGTTATCTTCG    CTTGACGGCGTTTACC CAACT GGTAGACTCCGCCTAG    TTGGTAAGCCATACG  62 74
JN178_RS05500 NONE
JN178_RS05505 1239934 .. 1239959 +  -8.4  -3.84931   ACGCCATGCAGGCAA         GAAAGTCATC ATAATG GGTGACTTTC          TTTCAATATTTGTTG  75 12
JN178_RS05510 NONE
JN178_RS05515 NONE
JN178_RS05520 1241691 .. 1241714 +  -3.8  -3.51329   TCGGATGTCTGCAGC          GTCGACAGTT AAAA AACGGTAGAC           TTATCATTCGGGCTA  51 138
JN178_RS05525 1242376 .. 1242387 +    -3  -2.82895   ACAGAGTTAGCAGCC                TTGA ATAT TCAA                 CTTGTTACTGCAGAC  42 31
        rimI NONE
JN178_RS05535 1244316 .. 1244331 +  -3.3  -3.67611   AAGCTTTGGTGAGTC              GCTAA AACCAA TTAGC               TTATGTTGAGCTAAA  51 332
JN178_RS05545 NONE
JN178_RS05550 NONE
        dkgB 1248050 .. 1248064 +  -4.3  -2.52623   GCTATCGACATTTAG               TGCAA ACGAA TTGCA               ATATTCTGCGAGGAA  47 57
JN178_RS05560 1249075 .. 1249106 + -13.8  -2.87564   TCCAATAATCAGATT      GCGCCCTTTGTCTT TTGC ACGATAAAGGGCGC       TGTCTGCACGCCTAA  93 84
        prfC NONE
        argS 1254647 .. 1254667 + -11.2  -5.71983   CGGTGATATCGAAAA            GGCTGACA TTTAT TGTCAGCC            TTTTTTTATGCTTAG 100 61
JN178_RS05580 1255377 .. 1255404 + -14.2  -3.48593   TAATTACGCAAAAAA        CGCGTAGGGTAG AAAT CTACCTTGCGCG         TTATATGCGGAGCTA 100 47
JN178_RS05585 NONE
JN178_RS05590 1258420 .. 1258430 +  -2.6   -3.3251   GTGATAATGCCCTCT                 TTTT CAT AAAA                 TCTTATGGTATCTCT  46 336
JN178_RS05600 1259395 .. 1259408 +  -3.1  -4.45117   TTTACATTGTGCCGT               GAAGT GAGC GCTTC                TTTGTTTGCGATATA  64 110
JN178_RS05610 1261286 .. 1261300 +  -5.7  -3.64822   TTTCCGCTGAAGCTT               GAGCA AATGA TGCTC               TTTCCATAAACGAGT  59 304
JN178_RS05620 1262824 .. 1262848 +   -13  -5.28778   TCAAATATTGTGGAA          TAAAGGTGGC GCTAA GCCACCTTTA          TTTTTTGTAAGTGCT 100 55
JN178_RS05630 NONE
JN178_RS05635 1265683 .. 1265696 +  -5.2  -3.53012   CATGAAAGGGCGGGC               GGCG GTTAAG CGCC                TTTCGCCCGCAAAAA  56 53
JN178_RS05645 1267493 .. 1267505 +  -4.1   -4.0825   GTCTAGCATCAAATA                TTGCA TAG TGCGA                TTGTTTAGTTGGGAA  59 353
JN178_RS05655 1269093 .. 1269114 +  -5.2  -2.78596   ATTGTAATTTTAGTA           GGGCTATT GTTGTA AATAGTCC            TATCGTGACACACTA  50 51
JN178_RS05660 1269716 .. 1269739 +  -7.5   -3.4252   TTCACTACACTGGCG          TACTGGC-GC ATGAA GCTGCCAGTA          TTGTAATGCATGCCA  65 131
         cdd 1272646 .. 1272665 +  -3.6  -3.31144   CTGGACATTGCAAAG            TCATTGCAG AGC CTGCGA-GA            TTATCGCACTCCACC  48 172
        prfB NONE
        lysS 1275786 .. 1275811 + -15.5    -5.252   CCTTTTCTACCAAGA         GGGCATTGACG GGAA CGTCGATGCCC          TTTTTTGTGCCCATG 100 75
JN178_RS05710 NONE
JN178_RS05715 NONE
JN178_RS05720 NONE
JN178_RS05725 NONE
JN178_RS05730 1287682 .. 1287698 + -12.3  -5.08178   GCCGGACAGTCAAAA              GTGTCCG CTG CGGACAC              TTTTTCTATGTCTGT 100 119
JN178_RS05735 1289168 .. 1289180 +  -6.9  -2.75064   GACAAATTTAAACAA                GCGCC TTC GGTGC                TACTTCGATAAGACA  60 2
JN178_RS05740 NONE
JN178_RS05745 1291262 .. 1291272 +  -3.2  -3.25823   AGAGCCAATAGGAGG                 GCGT ATC ATGC                 TTGATATAAAACCAA  48 30
JN178_RS05750 1292491 .. 1292519 + -14.7  -2.58544   AATATGCGCTAATAT        TGCTGCTTACCTA TTG TGGGTAAGCAGCG        CTTATGACAATAAAA 100 39
JN178_RS05755 NONE
JN178_RS05760 1295362 .. 1295379 +  -8.4  -2.72661   ATAAAAACCTTTCTA             GCCCTC TTACAC GAGGGC              TAGTTAAGCCTGCTA  65 171
JN178_RS05775 NONE
        prmB 1300521 .. 1300531 +  -2.6  -3.50393   CTTTGGTAGTAAGGA                 TTAA TAG TTAA                 TTATGTCAGGTAACA  47 22
        aroC 1301615 .. 1301634 +  -2.8   -4.4831   CAACCACTGCACCTA            TCGC-AGGC AAA GCGTAGCGA            TTATTTTTAGTCGGT  60 9
JN178_RS05795 1302988 .. 1303015 + -12.1  -3.30453   ACATGTTTCATCGTT        CACCGCGAGGCT TATTC AGCCT-GCGGTG        TTCGTCTGCATTCTG  89 54
JN178_RS05820 1309440 .. 1309456 + -10.1  -5.26875   TTACTTGATTGAAAA              GCCGGCT TTT AGTCGGC              TTTTTTGGTTAAAAC 100 53
JN178_RS05825 1312321 .. 1312336 + -11.8  -3.83378   TCTAAGTAATAGCAA              GGGGGC TTAG GCCCCC               TTATATATTTTCGGC  86 36
JN178_RS05830 NONE
JN178_RS05835 1314072 .. 1314088 +  -5.1  -5.06103   GTAAAAGGTTAAAGG              CGCCT GAAAACA AGGCG              TTTTTTGGCCATTCT  76 29
JN178_RS05840 1317373 .. 1317391 +  -3.9   -3.2665   AAGAGATTCATCGAT             GATTGTC TGGTC GATAATC             TGTTGTGCCATTTGA  48 155
JN178_RS05850 1318451 .. 1318480 + -13.7  -3.83756   GCTTTTATAAAGATA       AAAAAACAGCGCC TAAT GGCGCTGTTTTTG        TTTGCGTTGTACTTT 100 45
JN178_RS05860 1320676 .. 1320686 +  -2.4   -4.1964   AATCAGTCGAGCTTT                 CTGC CCA GCTG                 TTTTCACCTATTAGC  57 385
JN178_RS05880 1323313 .. 1323335 +  -9.2  -3.38559   TAACTGCTTTCATGA           GCAAGTCTTT TCA AAGGGCTTGC           TTATGACGTTATGAT  77 42
JN178_RS05890 1326015 .. 1326062 +   -29  -3.40743   CACAGAATTGACAGT TACCATAAACTAAAAAGGAGCC GTTC GGCTCCTTTTTAGTTTATGGTA TTACTTGCGCTTTTT 100 30
JN178_RS05940 NONE
        uvrB 1337816 .. 1337848 + -18.5   -4.4448   TTGCATTTAAAAATA      CGAAAGCCTCCGGTG ACT CACAGGGGGCTTTCG      TTTATTTACAACTTT 100 60
JN178_RS05950 1338985 .. 1339003 +   -11  -5.63517   AGTACGCACACTACA             GCCTTGCA ACT TGCGAGGC             TTTTTTGTTTGAGGA 100 66
JN178_RS05955 NONE
JN178_RS05960 1339828 .. 1339853 + -10.6  -3.73336   CACAAATTTAGGAAT         TAAGTAGCCA ACGTTG TGGCTACTTA          TTATTCAATTCCAAT  83 57
        queE NONE
JN178_RS05975 1342301 .. 1342317 + -13.7  -5.22312   TGTAATAAAAAAAAA              CGCGGCT TGT AGCCGCG              TTTTTTGATGTAAGT 100 65
JN178_RS05985 1345120 .. 1345148 +  -9.6  -5.65513   ATGTAACTGATAAAA        AGACAAAGGCCC TTAAT GGGCCTTTGTTG        TTTTTTTACTTAGTG 100 35
JN178_RS05995 1347774 .. 1347787 +  -8.1  -4.94992   ATGGGTATAAAAAAA               GCCCT TAAA AGGGC                TTTTTATCAATTTGA  90 31
        fadI NONE
        fadJ 1372870 .. 1372884 + -12.8  -5.76633   ATATAGTGTTAAAAA               CCGGGC TTT GCCCGG               TTTTTTTGTATGTAA 100 48
JN178_RS06095 1373291 .. 1373305 +   -10  -5.09426   GAAGACGAAAAAAAA               GAGAGC TTT GCTCTC               TTTTTTAGAATTCGG  93 75
        sixA 1382145 .. 1382164 +  -3.6   -3.3039   ACCCAAAACTATTCC            CGCTTTTT TACA AAAAAACG             TTAAGTTAATTTTTG  49 45
JN178_RS06120 1382811 .. 1382825 +  -4.2  -4.66833   GTACTCATCCACAAC               CAACGC AAT GCGTTC               TTTTTCGGCTTGGAA  69 412
         ffh 1386331 .. 1386355 +    -8  -6.23317   TAACAGTATTTAAAA         CCTCAATCGCA GCAA TGC-ATTGAGG          TTTTTTTATTTTTCT 100 58
JN178_RS06140 1388829 .. 1388842 +  -3.7  -4.05747   GACGGGCTACATCGT               GCGCG TGTG CTCGC                TTTCTATCAGATATG  59 293
JN178_RS06150 NONE
JN178_RS06155 NONE
JN178_RS06160 1394516 .. 1394549 + -19.7  -4.78149   TTCAGTTAAATAAAA     GGCGCGGGATAATGT AATG ACATTCTCCCGCGCC      TTTTTGAATTCTACC 100 62
JN178_RS06165 1395229 .. 1395240 +  -4.4  -3.33696   GGTAAAGATACATTA                CAGT AGAC ACTG                 TTAGTTACGCCAGAG  52 20
JN178_RS06170 1396532 .. 1396549 +  -8.4  -5.53991   ATACAAATAAAAAAA             CGCCAC GTAATA GTGGCG              TTTTTTTGATGGATA 100 72
        rpsP 1403165 .. 1403176 +  -5.8  -3.69663   AAGCGAAAAAATCTG                CAGC GTAA GCTG                 TTATTAACTGGTGGT  62 18
        rimM NONE
        trmD NONE
        rplS 1404895 .. 1404911 + -10.8  -5.28176   GTTAACTTCGAAAAA              GCCCGC GTTAA GCGGGC              TTTTTTGTGCCTGAA 100 63
JN178_RS06210 NONE
JN178_RS06215 1406764 .. 1406774 +    -4  -4.61868   GCGAAAGTGCTTCAA                 TAAG CGG CTTA                 TTTTCTCTCTCGATA  69 109
JN178_RS06225 NONE
        tyrA 1410114 .. 1410132 +  -8.8   -3.0873   GTAAGCTAGCAAGAC             TGCGCGTT TAA AGCGCGCG             TCTTCAACTAGTTTG  70 37
JN178_RS06255 1414884 .. 1414897 +  -2.3   -4.3586   TTGGATGTAGTCATG               CCGGG GATG TCTGG                TTTTGATGTAGCTCC  57 218
JN178_RS06265 1416919 .. 1416932 +  -5.3  -3.75491   GGGGCGCGACTGACA               CCTTT TAAA AAAGG                ATTTTATTTTTAACT  62 28
JN178_RS06270 1419139 .. 1419174 + -12.9  -3.68988   TAGCGTAATGTAACC    GC-TGTTGCAAAAAAG TGTTT CTTTTTTGCAACATGC    TTCTGTTGGCTGAAA  95 72
JN178_RS06275 NONE
JN178_RS06280 NONE
JN178_RS06285 NONE
JN178_RS06290 1423028 .. 1423048 + -11.2  -5.48514   AAAAAGTAAGAAAAA            CGCATCAC TTTTT GTGATGCG            TTTTTCTTTGTTCCT 100 55
        aspS NONE
        nudB NONE
        ruvC 1426880 .. 1426893 +  -2.3  -3.53836   GCGCGCAAAACAGTG               CGCGG ACGC TTGCG                TTAATCTTATTTTCC  46 8
        ruvA 1427607 .. 1427622 +  -5.4  -2.73441   AGCGCTTATTCGCGA              GGC-GCT CAA AGCAGCC              CTTTAACGCATAGTA  52 4
        ruvB 1429058 .. 1429068 +  -6.8  -2.57489   ATCGTATTATCTAGG                 CCGT TTA ACGG                 TAACTTGGATTAATA  56 381
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB 1432824 .. 1432835 +    -3  -3.55444   AGTTGGTCACCATTT                TTGT TCTA ACAA                 TTTAACGACTAAACA  49 17
         pal NONE
        ybgF 1434239 .. 1434255 + -10.9  -5.51046   CTTGTAGTGAACAAA              GCCTCTT TTA AAGAGGC              TTTTTTGTGTCTTTC 100 34
JN178_RS06360 1434607 .. 1434625 +  -3.8  -2.76189   CCCACCACTTTCTCT             CCTAGCAT CAA ATGATGGG             TCGTTAGCTCAGTTG  45 34
JN178_RS06365 NONE
JN178_RS06370 NONE
JN178_RS06375 1435070 .. 1435080 +  -6.8  -4.13304   GCTGGTCGACAAAAC                 TCGC GCA GCGA                 TTTTGAACGTGCTTT  71 114
        nadA 1436325 .. 1436354 +  -5.2  -3.21551   CTAAAAGCAAAAGGC       G-GCTTGTAAAAC AGCGC GTTTTATAAGCAC       TTGCTCACTAATTTT  52 17
JN178_RS06385 1436536 .. 1436569 + -17.7  -3.75665   TCTCTCTCCGCCAAA     TACAAAAGAACCGGC TTTT GCCGGTTTTTTTGTA      TTTGCTGGGATGTGA 100 28
JN178_RS06405 NONE
JN178_RS06410 1439891 .. 1439910 +  -2.1  -4.15222   ATTGGCTTGTTGAAA            TAGATGG TTTACT CCAGCTA             TTTCTTCAACCCGAT  55 313
JN178_RS06425 NONE
JN178_RS06430 1441681 .. 1441693 +  -9.1  -2.78816   GACAGATTGGAATCA                GCGAC TAA GTCGC                TGTGCTAAAAAGTCA  68 88
JN178_RS06455 1447876 .. 1447894 +  -8.8  -5.24129   ACGTGAATTAAAAAA             GGCCAGTT TGA ATCTGGCC             TTTTTTGTACAAGAG 100 52
JN178_RS06465 NONE
JN178_RS06470 NONE
JN178_RS06475 1452247 .. 1452283 + -18.3  -2.99596   AATAACTTGCTTTCA    TGTAACCTTTGGGTATC ATT GATACCTAAGGGTTACA    TATGGTTGGTTTAGG 100 60
JN178_RS06480 NONE
JN178_RS06485 1453108 .. 1453128 + -15.5  -4.07675   TGTGACTTACATTAA            GCGTACGAC AAT GTCGTACGC            TTTGGTTGATTTTGC 100 47
JN178_RS06495 1455422 .. 1455436 +  -2.8  -3.20832   CCTCAGCCTTATACA               GTGTTA TAA TGACGC               GTTTTCAATTTCAAA  44 79
JN178_RS06500 1456729 .. 1456742 +  -4.5  -2.60456   AGCATAAGAAAAAAT               CACCG TTTT TGGTG                CTTGGTAATTTGCTT  47 39
JN178_RS06505 1457176 .. 1457193 + -12.7  -4.30809   AACTAGCATAAAAAA             CGCCCCA TGTC TGGGGCG              TTTTGCTGAGTATTA 100 35
JN178_RS06515 1459802 .. 1459830 +  -8.1  -4.32482   CGCTGGCAAGTTGAC        CGCCATATGCTCT TTC AGGTCATTTGGCG        TTTTAGGTTCTCCGT  79 384
JN178_RS06525 1461045 .. 1461079 + -10.9  -3.44792   TAACAAATAGAAAGC     GTGACCTTTACAGAA ACAGC TTTAGTAAAGGTCAC     TCTCTTTTCGCTTGC  83 52
JN178_RS06540 1466360 .. 1466377 +  -2.7  -4.08216   ATTAGCACTTAACTT             GTTGG-GT AAA ACGCCAGC             TTTTCAGAGCACTAG  55 367
JN178_RS06545 1468584 .. 1468603 + -12.2  -5.52023   TATAGACGTAAAAAA            GCCATTCG CTTG CGAATGGC             TTTTTTGTTGGTCAT 100 61
JN178_RS06585 1479644 .. 1479657 +  -3.9  -3.20361   GTACACAATGAGAAT               TCTAT GAAC ATAGA                TTACCTTCGACTTTT  48 49
JN178_RS06590 1480552 .. 1480583 + -10.2  -2.90711   ATTGTTACAGGGCAC      TTTGCGTGAGCTCT AAAC AAAGCTCACGCAAC       TAATCTTATTTAGCT  75 10
JN178_RS06610 1484848 .. 1484873 + -20.5  -4.87892   TAAGGAAACAAAAAA         GCCCGCGGTAG TTAG CTACCGCGGGC          TTTCTTTTATTAGGA 100 82
JN178_RS06620 1487479 .. 1487491 +  -4.8  -3.37188   TAAACCGGCAATTAA                CCAC ATTAC GTGG                GTTTTTACCGTACCT  54 476
JN178_RS06630 NONE
JN178_RS06635 1491407 .. 1491417 +  -3.2  -4.33004   CTATACTGCTATAAT                 CAGG TAA CTTG                 TTGTTTTACTTGGCT  60 389
        bioB NONE
JN178_RS06685 NONE
JN178_RS06690 NONE
        bioD 1503210 .. 1503227 +  -2.6  -4.80455   ATTGGTTTAAGCTAT             CGCCGG CATTAA TTGGCG              TTTTCTCTTTACCTA  68 31
JN178_RS06705 1504514 .. 1504538 +  -6.4  -3.34106   ACTAAACCTTATAAG         GCATCCGCGGT GATC ACCGCGC-TGC          TGTCTGTTTTATTCA  61 36
JN178_RS06710 1505458 .. 1505472 +  -4.3  -2.50935   ATTGTCAAAAGGGCA               GGTTA AGGGG TAACC               CTTAATGCATGGCGT  47 13
JN178_RS06715 1506405 .. 1506415 +  -3.2  -3.05384   CCTTGGAATAAATGT                 GGTA AAG TGCC                 TTCAGTGCCCAAAAA  45 30
JN178_RS06720 1507930 .. 1507949 +   -15  -5.26316   GCAAAGTAAACAAAA            GCCCCAGC TGTT GCTGGGGC             TTTTTTATGAAATAA 100 68
JN178_RS06750 NONE
JN178_RS06755 1514696 .. 1514713 +  -2.1  -3.10612   TCGTAATAGAGGTTG             GT-AAATG TCG CATTTCAC             TGTATTGGGCTTAGG  43 35
JN178_RS06760 NONE
JN178_RS06765 1516782 .. 1516818 +  -8.1  -3.85698   TTTCGTACATCAATG   CAAGTTGTTCCCCCAG TTTGTT TTGGGGGAACC-CTTG    TTTGTGAAACCACAC  71 90
        moaA NONE
JN178_RS06785 1520958 .. 1520977 +    -5  -2.93975   TTGTTTCAAGTAGGT            GGCAAGTA GGTT TACTTCCC             CTGTTTTTGACGGCT  50 361
        gltX NONE
JN178_RS06820 1525003 .. 1525017 +  -2.1  -4.07246   CCTGGCTCCACCAAG               CTACA GAGTA TGTGG               TTTGATTTAGGCTGG  54 28
JN178_RS06825 1525350 .. 1525366 +  -5.2  -3.03412   GAAATTTAGTGAAGC              TTTGCT TCACT AGCAAA              ATTTCTGTCCCCTTC  51 157
JN178_RS06830 1525578 .. 1525594 +  -5.2  -3.03412   GAAATTTAGTGAAGC              TTTGCT TCACT AGCAAA              ATTTCTGTCCCCTTC  51 155
JN178_RS06835 1525806 .. 1525822 +  -5.2  -3.03412   GAAATTTAGTGAAGC              TTTGCT TCACT AGCAAA              ATTTCTGTCCCCTTC  51 155
JN178_RS06840 1525908 .. 1525939 + -16.8  -4.72846   TAGGGGACGCCATAT      CGAAAAAACCAGCC ATCC GGCTGGTTTTTTTG       TTTTTACCTCTCTCA 100 29
JN178_RS06845 1527216 .. 1527233 +  -2.7  -3.25918   AAATAGACGCTTGAA             CGTTTAG ACGT CTAGATG              TATATTTAAGCCTTC  46 35
JN178_RS06850 NONE
JN178_RS06855 1527685 .. 1527719 + -13.9  -3.56836   GCTCTAAACTCAAAA    TGGACAGACACTTTAT GTAA AT-AAGTGTCTGTCCA     TTTGAGCCCTCATTT 100 34
        dusC 1528863 .. 1528873 +  -3.2  -4.46212   CAAGTGCACATTCCT                 TAGC TAG GCTG                 TTTTGTACTGGGGAA  62 69
JN178_RS06865 NONE
JN178_RS06870 1531667 .. 1531684 +  -9.9  -5.24531   GATTTAATTGTTGAA             GGCTTTC ATTA GAAAGCC              TTTTTTATGAAAGAT 100 44
JN178_RS06890 NONE
JN178_RS06895 1537294 .. 1537306 +  -2.7  -3.32963   GTTGACCTTCCAGAA                TCATT GTT GATGA                TTCTCCCATCGCAAT  46 248
JN178_RS06910 1539712 .. 1539731 + -10.8  -3.21099   TCCACTTTATTAGAA            GTCGAGAA CTAA TTCTCGAC             TTCGTGATAGGGAAA  80 157
JN178_RS06965 NONE
JN178_RS06970 1551488 .. 1551500 +  -3.3  -3.35679   AAAGAAAACAGCATT                CAGAG CGA CGCTG                TTGTGACTGCGCCAG  48 211
JN178_RS06975 NONE
        scpB NONE
        rluB 1553898 .. 1553913 + -10.4  -5.71983   TTATGATGCAGAGAA              GCCGCT AAAT AGCGGC               TTTTTTTGTGCTTAA 100 60
        dkgB 1555786 .. 1555815 + -14.9  -5.77988   TATACCACACAAAAA       CGGTGAGGCGAGC AATA GCACGCCCCACCG        TTTTTTTGTGTCTGT 100 66
JN178_RS07000 NONE
JN178_RS07005 NONE
JN178_RS07010 1559167 .. 1559181 +    -5   -3.7175   CCAAACACTCGTTGA               TAGCAG TGT TTGCTA               TTTCAATCCGTTTTT  60 115
JN178_RS07015 1561492 .. 1561508 +  -7.9  -2.91395   ACAACAACGTTATTG              CCAAGCG TTA CGCCTGG              GTTTATCACCGCCAT  61 161
JN178_RS07030 NONE
JN178_RS07080 1575206 .. 1575243 +  -9.3   -3.6692   TCCGTTAGGTTGTTT   TCTTTGGCTTGCGCAGCA ATT TGTTGCTCAA-CCAAAGG   TGTTTTGACATAGGC  75 225
JN178_RS07105 1582045 .. 1582056 +  -3.6  -4.26188   ACAGTACACCTCACC                GTGG GCTA CCGC                 TTTTAAGTCTATGCA  62 8
JN178_RS07110 NONE
JN178_RS07115 1584722 .. 1584736 +  -7.2  -3.98159   ACACAATACCCCAAT               TTTTGC TGC GCAAAA               TTTAATCTTCTGATA  72 72
JN178_RS07120 1585923 .. 1585955 +  -8.6  -3.56594   GCGGTTAGCGGTTAT     CAGTAAGGTGACATC AAAA GATG-CACCTTGTTG      TTTAAGCGCGTTTAC  71 151
        grpE 1591804 .. 1591816 +  -4.8  -4.62069   GGTGTGGACACGCAA                GCGT AAGTC ACGC                TTTTTGCGATAAACA  70 20
        dnaK 1593906 .. 1593932 + -15.2  -4.39998   GTTTTTAGCAGTTCA         GGCGCAGCAGGA AAC TCTTGTTGCGCC         TTTGTTGTGTAAATA 100 77
        dnaJ 1595211 .. 1595260 +   -10  -2.60956   CTAAGTTTCACCAGC TTACTCTTCGGCCAGCGTAATG CGTTTC CATTTCGCTGGCCAACGCGTGA CTTGTAGCGTCCTTT  74 37
JN178_RS07150 1596328 .. 1596352 + -13.1  -3.16873   GATAGTCAACTAATA          GATCAAGAAAA GCT TTTTCTTGATC          GTTTGTTAACTTTAA  91 353
JN178_RS07160 1597552 .. 1597563 +  -5.8   -3.6502   TGCGTCTAAGCGCTA                CAGC TAGA GCTG                 TTTCAATCACCAATG  62 183
JN178_RS07170 1601515 .. 1601548 + -11.9   -2.9675   AGCAGTATTGAACGA     TCCGTTGTAGTGTTT TAGT AAACCCTACAATGGA      TATGGTTATGAACTA  87 194
JN178_RS07175 1603874 .. 1603887 +  -3.1  -3.86524   GGGTTATGACCGAGA               GATTC TGGT GAGTC                TTTATCAAAAAGTGT  55 445
        dapB 1605436 .. 1605463 +    -7  -5.28826   GCAAAGATCGTAAAA        CGGGATGTATTG TTAT CAATAACTCCCG         TTTTTTGTGGGGTTT  91 286
        carA NONE
        carB 1609954 .. 1609972 + -11.7  -4.90471   GTGAATGAATAAAAA             GTGCGCC TATGC GGCGCAC             TTTTCTGTTTTAAAT 100 86
        greA 1610517 .. 1610540 +  -6.8  -5.92337   GTCCTAAACAAAAAA          CGTCATTAAT ACGC ATTAGTGGCG           TTTTTTTTCATCTAT 100 54
JN178_RS07205 NONE
JN178_RS07210 NONE
JN178_RS07215 1614190 .. 1614205 +    -4  -4.08474   CTCAGAAATACCTTT              GTGTAA GAAC TTACGC               TCTTTATTTTCTTTC  59 338
JN178_RS07230 1617868 .. 1617879 +    -3  -3.49419   TGCCGCCGAAGCGGC                TAAG TTCG CTTA                 ATTTTTATCAAGAGA  47 13
         pta 1620100 .. 1620126 +  -7.2   -4.6644   TCTCAAGTAAAAAAA         TGGCGCTCATGT AAT ATTAGAGCGCCA         TTTTTCCAATGTCTT  79 50
JN178_RS07270 NONE
JN178_RS07275 1629072 .. 1629084 +  -4.9  -3.84825   GTCCTTCATCGAGTA                CAAAT GGT ATTTG                TTTGATGTCGCTGAC  59 292
JN178_RS07305 1637469 .. 1637485 + -12.3  -4.81083   TTTACTAAGTGAAAA              CGGAAGC CTA GCTTCCG              TTTTTAGTAATTAGC 100 45
JN178_RS07320 1638684 .. 1638700 +  -9.4  -5.20333   CTTATTAGTTTTGAA              GAGCGC GATGG GCGCTC              TTTTTATTATCAATC 100 230
JN178_RS07330 1642818 .. 1642838 + -15.5  -5.26875   GTGCAGCACGCTAAA            GGCCGATAC CTT GTATCGGCC            TTTTTTCATTGCGGC 100 48
JN178_RS07340 1644459 .. 1644478 +  -7.2  -3.55444   ATACACCGTAAGCGA            CCATTTGC AGCC GTAAATGG             TTTCGACCATGCGCG  65 311
JN178_RS07350 NONE
JN178_RS07355 1646163 .. 1646178 + -10.4  -4.51097   CCTAAAACAAAAAAA              GGAGGC CTTC GCCTCC               TTTTCTAGTCGTTAA  89 69
JN178_RS07430 1654147 .. 1654175 + -14.7  -2.72881   TTCGCGAATGCAATT        AAAAAAGGCGAGC CAT GCTCGCCTTTTTG        CTGTTTGCTTACATC 100 50
JN178_RS07455 NONE
        prfA NONE
        prmC NONE
JN178_RS07470 1661924 .. 1661945 + -13.1  -5.40474   TAAATCAACGATAAT           TACAGGTGC TTTT GCACCTGTA            TTTTTTTACAACCAT 100 115
JN178_RS07475 NONE
        kdsA 1663451 .. 1663465 +  -7.1  -3.06991   TGTGCGTCATTTTCA               GGCAG TACAT CTGCC               ATTTTAACGCTGGTC  60 246
JN178_RS07490 NONE
JN178_RS07495 1665439 .. 1665453 +  -4.2  -2.72661   ATTACAATACATCGT               CCATGG CTC CCATGC               TGCTTGCAGCTGGTG  47 130
JN178_RS07500 NONE
        rlmM 1666899 .. 1666923 +  -7.2  -5.16681   TACAGTAACAATTGT          TCGCACTTCA AAAGA TGAGGTGTGA          TTTTGTTATTTTTCA  85 1
JN178_RS07510 1669243 .. 1669261 + -11.7  -5.29782   CTTCGAAATTTAAAA             GCCGGTC TTAAT GACCGGC             TTTTTTGTGCCTGTC 100 74
JN178_RS07515 1669814 .. 1669824 +  -2.4  -3.08133   TAGTTTAGTAGATAA                 GCCG CGG CAGC                 TTCGATACCTAAATC  43 93
JN178_RS07555 NONE
JN178_RS07560 1682092 .. 1682119 + -12.8  -5.77677   ATATAATGTTAAAAA        CCGCATGAATGC ATAC GAATTCATGCGG         TTTTTTGTTATTTTA 100 77
JN178_RS07565 1684759 .. 1684784 +  -9.7  -5.95539   CGATAAAAACCAAAA         GCCCAGCGATG TAAG TATCTCTGGGC          TTTTTTTGTTTGCCC 100 48
JN178_RS07570 1686338 .. 1686348 +  -2.4  -3.78329   ATTGTTGGGGTTTCT                 CCCC GTC GGGC                 TTTGGCTTAGTAAGG  50 5
        astE 1687480 .. 1687492 +  -4.1  -3.07307   ACAACTCTGGAAGAC                CTCGA TGT TTGAG                TTAGATAGCCGTTTA  48 14
JN178_RS07580 NONE
JN178_RS07585 1688291 .. 1688309 +  -3.1  -5.69793   AAGTTCCTTTCCTAG             GGCATAG CACGA CTATACC             TTTTTTATTTAGTCT  88 44
JN178_RS07590 NONE
JN178_RS07595 1689757 .. 1689770 +  -6.7  -3.53761   CCTTTTTGTTTTAAA               CTGCA ATAG TGCAG                TTTACACGGCACTTC  63 272
JN178_RS07630 1693705 .. 1693722 +  -8.4  -3.54424   GAAAAAGGTGAAAAA             GGCAGC GATTAA GCTGCC              TTTCACCAGATACGA  71 14
JN178_RS07645 1697276 .. 1697286 +    -4    -4.323   TTGGTGATAGATTGC                 GTAA GGG TTAC                 TTTTGCGTGTTTAAC  62 80
JN178_RS07650 1698489 .. 1698509 +  -2.6  -5.06414   CTGACTTATTAGTCA            CTTAACCT GTCGA AGGTTAAC            TTTTTCTTGCAGGCA  70 98
JN178_RS07655 1698859 .. 1698883 +    -5  -4.04927   ATACGGTTGACAATT          CTATGCGTCA CTTTT TGCCGTATAG          TTGTTTCATGCTTAC  63 216
JN178_RS07660 1700393 .. 1700405 +  -3.3  -4.36914   ACAAATTGTAACGGC                AACGC GTA GCGTC                TTTTGTGCAGCGAAC  62 413
JN178_RS07685 1706558 .. 1706575 +  -2.7  -4.89477   ACTTCTTACAAAGAA             GTAGG GGAAGAGA CCTAC              TTTTATTCTTCCCAC  67 22
JN178_RS07705 1711541 .. 1711554 +  -4.5  -2.71144   GTCATCATAACATTG               CGAGG GTGG CCTTG                TGATTCAAACCAGTG  47 282
JN178_RS07715 NONE
JN178_RS07720 NONE
JN178_RS07725 NONE
JN178_RS07730 1715969 .. 1716018 + -13.7  -3.69068   GAACGTATAGCCGGC GTAGTACCAAAGCGAGCGATAGGC ATA GCCTGAAGTTCGCTTTGGT-CTGC TATTTATTGCAGTGA 100 68
JN178_RS07760 1724226 .. 1724253 + -17.2  -3.58329   CGCTTCGGCGTTGTT        TAAAAACCGCGC AAAT GCGCGGTTTTTA         TTTGGCCACTGTTTA 100 50
JN178_RS07780 1728871 .. 1728885 +  -2.1  -4.19879   GTTGCTTCATGAGCA               TCAAG CACTT CTTGG               TTTTGCCACTTTTCT  57 197
JN178_RS07795 1731362 .. 1731399 +   -13  -4.18697   AAACATTAAAGATTA  GTATCGCGTCGC-ATGCA CATG TG-ATCGCGACGCGATAC   TTTTAAACTAATTTT 100 39
JN178_RS07835 1740457 .. 1740477 +  -4.7  -2.69151   GGGTGCGGTTTATCA            GTGCCTGTA GAG TATAGGGAC            TAATATGTCACAGGC  49 2
        puuE 1741393 .. 1741405 +  -4.1  -2.78438   TCCTATAGCCGATAG                TGACA ATA TGTCG                GTTTAGGATGTAGTC  45 7
JN178_RS07845 1741724 .. 1741739 + -10.4  -5.22312   ATAATCAATAAAAAA              GGTGGC CATG GCCACC               TTTTTTCGTCTAACT 100 47
JN178_RS07855 1744393 .. 1744427 +  -3.1  -4.92655   TTGAGTAGAAACCAA    C-GAAGCGAGATAAA AAATCAA TTTA-CTCGCTTCAG    TTTCTTATTTTTTTT  69 41
JN178_RS07865 NONE
JN178_RS07870 NONE
JN178_RS07875 1750388 .. 1750413 + -12.7  -3.07307   GTGCTATCCGCGAAA         CGCGC-AAAGGT ATA ACCTTTAGCGCG         TTACCTCGCAATTTA  91 11
JN178_RS07935 1765464 .. 1765494 +  -3.3   -3.3323   TCGATGCTAGGCAAT      GCTGAAGAGATGGT CAAC GCTATCACTTC-GC       TTCCGTTTGATATTG  48 169
JN178_RS07940 1766960 .. 1766976 +  -5.9  -3.91858   TGCAGAGCGAACAAT              TTGAAGC TGG GTTTCAA              TTTCTGCACTGTCTA  63 433
        thrS NONE
        infC NONE
        rpmI NONE
        rplT 1773049 .. 1773083 + -20.2  -4.15508   AAGTTTAAGTTCTTT     CGGGAAAAGGCGAGCA GGA TGCTCGCCTTTTTTCG     TTTTAAGACTTAATT 100 54
JN178_RS07990 NONE
JN178_RS07995 NONE
JN178_RS08000 NONE
JN178_RS08005 NONE
JN178_RS08010 1782286 .. 1782299 +  -6.7  -4.03234   ATACGGCTTTCAATA               CGAGA TAGG TCTCG                TTTATCTCGCCCAGC  70 193
JN178_RS08040 NONE
JN178_RS08045 NONE
JN178_RS08050 NONE
JN178_RS08055 1792929 .. 1792942 +  -2.4  -2.59222   TTGTAAGGACGTTTC               CTGT TTTGTC ACAG                ACTTTTGTACTTAAT  40 69
JN178_RS08060 NONE
        wcaK NONE
JN178_RS08070 1796171 .. 1796186 + -10.4  -5.19261   TTAATTTTTAAAAAA              GGAGGC ATTA GCCTCC               TTTTTTACTGAGTTT 100 37
JN178_RS08080 1800134 .. 1800163 +  -9.4  -3.01918   TGGGGAAAATAAAAA       GCACTGGTTTTT TAACTC AAACACCAGTGC        TGATTTGTGAAATAA  73 56
        pheS NONE
        pheT NONE
        ihfA 1807101 .. 1807141 + -14.4  -2.87146   ATCACTAGGTCGTTA CAATATATAAAAGAGCGAG CTTT CTCGCTCTTTT-TGTATTG  CTTCTTATAAAGCAG  95 40
JN178_RS08110 1807744 .. 1807775 +  -2.4   -3.1319   GAACAAGCTGAAAAG      TTAGAACAATA-GCC TAA GCCATATTGCTCTAA      TTAACTCAGTTTTAG  43 14
JN178_RS08115 1809142 .. 1809154 +  -7.7  -5.26316   CATACTTGAGTACGT                GGTGT TTA ACACC                TTTTTTCTGCAATAG  91 467
        nagZ 1812645 .. 1812655 +  -5.4  -4.20367   TATAGCAATCTGCAT                 GCAA TAT TTGC                 TTGTTTATTAACCAG  68 56
JN178_RS08135 1813564 .. 1813574 +    -4  -4.37711   CGCTACTAGGTACAT                 TTAG ATT CTAA                 TTTTGCCTTTCATAC  64 15
JN178_RS08160 1821415 .. 1821427 +  -6.3  -2.62246   GAATAATTCATTGAA                TTTGC CGT GCAAA                ATTGGTTGAAATTCA  54 35
JN178_RS08165 1822076 .. 1822097 + -12.3   -5.4251   ACCTATAAAATCAAA           GCCTCAGAC ATTC GTCTGGGGC            TTTTTTATATCTAAC 100 55
JN178_RS08195 NONE
JN178_RS08200 1828168 .. 1828178 +  -6.8  -2.75993   GGTCTGGGTTAGCAG                 GCCA TAT TGGC                 GTTGTATATCAGTGG  57 69
JN178_RS08235 1832316 .. 1832340 + -11.6  -5.80003   ACAATTGAGAAAAAA          CCTGTTTGTT AAAAA AACAAACAGG          TTTTTTATTTCTTAG 100 55
JN178_RS08245 1834688 .. 1834701 +  -9.5  -5.51612   GCAAGATTGGAATAA               GGGGC CATC GCCCC                TTTTCTTTTTTATAT 100 51
JN178_RS08250 1835957 .. 1835969 +  -4.1    -3.727   CCAAATAGGCCACTT                TCTGT CAT ACAGG                TTTAACTGTGGTACC  55 444
JN178_RS08260 NONE
JN178_RS08265 1838706 .. 1838719 +  -8.1  -2.75963   TGTATGTGATCTATA               GCACC TAAT GGTGC                GTTTAAAATGAAAAT  66 71
JN178_RS08270 1839985 .. 1840011 + -11.7  -2.94062   CTAAAGAAAAATAAA        GCGCAGTA-GGT AAAA ACCATACTGCGC         TCTAATATTGGTATC  82 27
JN178_RS08305 1848665 .. 1848686 + -11.6  -3.99481   GTTTTAATGTTTTCA           GTGGCACC AATGAG GGTGCCAC            TTGTGTTTTAATAAA  90 56
JN178_RS08310 1849731 .. 1849753 +  -2.8  -2.86102   ACGCATTATTAGAGG           TTATTAATCA GCA TGGTTACTAA           GGTTTTTTCTGCTGA  42 3
        kynU 1851053 .. 1851063 +  -3.2  -3.27476   AAATATTGCTTTTTA                 CGTT TTA AGCG                 TTAATACTTCGCGGT  48 100
JN178_RS08320 1852892 .. 1852902 +  -5.4  -3.61468   ATTTGCTTTAAAAGT                 TCGT CTA ACGA                 TTCCTTTCGTTCCAG  59 362
JN178_RS08335 1859706 .. 1859722 +  -6.5  -2.91696   AATTATTCTAATAGC              CGCGTAT TCA AGACGCG              CTTCTATTCTTCTAA  58 223
JN178_RS08340 1860747 .. 1860765 +  -6.7  -3.14344   AGACTAACCCGGTTC             GACGGTG TCTTT TACCGTC             TTAGTAGACACCGTC  60 34
JN178_RS08345 1861373 .. 1861388 +  -4.6  -4.14472   ATGGTTATCAGCGCG              CGGGCT AGGT AGCCAG               TTTTGCCAATATTAC  61 18
JN178_RS08350 1862961 .. 1862994 +  -8.1  -2.88667   GTATCAACGCTTGAT     GTACGGTGCTGCGTA GTGT TTCGCAGCCTTGTAC      TGGCTTTTTATGGCG  66 50
        hrpA 1867320 .. 1867334 +  -4.2  -4.07885   CAACAAATGAAGTCG               TAAGCG TTA CGCTAA               TTTTCGGGAGAAGTA  61 185
JN178_RS08360 1867805 .. 1867825 +  -3.2  -4.25256   CATTAACGATTTGGT            CCTTCATG GTGGA CAAGAGGG            TTATTTTGATGAAAA  60 175
JN178_RS08365 1868376 .. 1868388 +  -3.3  -3.07307   GATGTCTTTATACCC                TCGCG CAG CACGA                TTAAGTGACGCTTTG  45 334
JN178_RS08375 1870795 .. 1870805 +  -5.4  -3.84961   CTACATTACACGGCT                 CAGT TAA ACTG                 TTTAGTGCTTCAATA  61 330
        dnaQ NONE
JN178_RS08390 1873478 .. 1873488 +    -4  -3.86252   GGTGGCGTTAATTTA                 TTCA CTT TGAA                 TTATATTTCGTCACA  55 77
JN178_RS08395 1873745 .. 1873767 +    -4  -2.80398   TTAATCGAAATAAGC           GCGCTTCCCA TTA TGCGGAGCGG           TAGTTCAGTTGGTTA  45 41
JN178_RS08400 NONE
JN178_RS08405 1873960 .. 1873982 +    -4  -2.80398   TTAATCGAAATAAGC           GCGCTTCCCA TTA TGCGGAGCGG           TAGTTCAGTTGGTTA  45 41
JN178_RS08410 1874236 .. 1874262 +    -3  -4.19735   CTTTTATTTTTCCAT         TGGTGTTGATAG GGT TTAGCGATACCA         TTTACTTTTGAAAAG  55 209
        lolD NONE
JN178_RS08420 1876327 .. 1876344 + -12.7  -4.72846   GACACGCATAAAAAA             GGCAGCG TTAA CGCTGCC              TTTTTGCCTGTGTAC 100 132
JN178_RS08430 1880375 .. 1880391 + -13.7   -5.3671   AATGAATACTAAAAA              GCCCGTC GTT GACGGGC              TTTTTTAATTATATT 100 52
        topA 1884835 .. 1884853 + -11.7  -4.59773   ACACGCTCTTACAAA             GCCCGAG TTTTT CTCGGGC             TTTTTGCGAGTAACC 100 56
JN178_RS08445 1885456 .. 1885466 +    -4   -3.3782   AAATTCCTGACGATC                 TTAC GTG GTAA                 TTGATTGAGTCGATG  49 15
JN178_RS08450 1886126 .. 1886136 +    -4  -3.73775   TAACTAGATAAGCAA                 TTCA CCG TGAA                 TTTCCTGAGGCTGGC  55 109
JN178_RS08455 1887307 .. 1887326 +  -2.2  -4.59027   CACTTATGGGATGTT            CACATTTA TCTC TAAATGTC             TTTTCTCTAATAGTT  61 385
JN178_RS08495 1897652 .. 1897662 +  -5.4  -3.88291   GACAACCATTCTCAA                 TCGT TGC ACGA                 TTTATAGCAATCATA  63 424
JN178_RS08505 NONE
JN178_RS08510 1901499 .. 1901528 + -10.9  -6.11229   TCGAGTAGTCGAAAA       CACCTTCAAAC CTACATCA GTTTGAAGGTG        TTTTTTTATTTTAAT 100 54
JN178_RS08515 1905434 .. 1905444 +  -3.2  -3.59698   TTTGAGTAGAGTGTG                 GTAG TTA CTGC                 TTATGTCTAGCCTAC  51 53
JN178_RS08520 1907683 .. 1907701 + -10.3  -5.75945   ACTCGTTCTTTAAAA             CTCCAGC AATTA GCTGGAG             TTTTTTTTAGGAGCT 100 51
JN178_RS08535 1910541 .. 1910560 +    -5  -3.25652   ATATTAGATTGTCTG            CCCT-TCCT GAA GGGATAGGG            TGTTAATTGCATAGC  54 0
JN178_RS08555 1916687 .. 1916702 +  -6.1  -4.33258   TTGTTTGACAAAAAA              GGCCT GTTTTA AGGCC               TTTGTATTTAGGAGT  70 53
JN178_RS08560 1919403 .. 1919426 +  -6.8  -3.13522   AACCGCAGTCCAAAC          GCAAAGAAGG CAGT TCTTTTTTGC           TCTTACTAAGCCAGT  59 318
JN178_RS08575 1922505 .. 1922515 +    -4  -4.18494   TTGTGAACATATACA                 TTCA GGT TGAA                 TTTTAGATGAAAGTG  59 225
JN178_RS08580 NONE
JN178_RS08585 1924422 .. 1924436 +  -4.2  -2.87564   GGTAAGAGATTAATG               CAATGG TAA CCATAG               TGTCTGAACAAATAC  48 28
JN178_RS08590 1925766 .. 1925790 +   -10  -4.89562   TTCGTGTGGTCATGA          GGACGGAGCT AAGAA AACTCCGTCC          TTTTCTTCATTTTAA  93 42
JN178_RS08595 NONE
JN178_RS08635 NONE
JN178_RS08640 NONE
JN178_RS08645 NONE
JN178_RS08650 NONE
JN178_RS08655 1943395 .. 1943414 +  -4.9  -2.63164   AAATTGAACATACAT            AGGGGCT TTTTGT AGCCCCA             CTTCATTGAGTATAA  49 39
JN178_RS08675 1946710 .. 1946726 +  -6.6  -2.80307   CTCAATAGAATCCGC              CGCTTT TACTT AAAGCG              TCTAGTAGCGGTTTA  57 107
        yegQ NONE
JN178_RS08685 1948445 .. 1948464 +    -5   -3.5764   TAGCGAGCTTTAAGT            GCTAAAGC AGAC GCTTTACC             TTTCAAAATAGACTT  57 28
JN178_RS08690 1949200 .. 1949212 +  -3.3  -4.86033   CGCCAGCTTCTTCCT                GCGTT CCT GGCGC                TTTTTCTCGACCTTT  69 139
        yceD NONE
        rpmF 1964574 .. 1964600 +  -2.2  -3.31946   TACAAAGGCAAGAAA         GTAATCGGCG CGTAATA CGGCGACTAC         ATTTTGTCTACACTA  45 11
        plsX 1965614 .. 1965624 +  -3.2  -3.55548   GATAGAAACGGTATT                 GTTG GAG CAGC                 TTTGAGCAAATATTC  51 10
JN178_RS08765 1966607 .. 1966619 +  -3.4  -4.64846   GTCCTGCTAATATCG                CACT TTTTT AGTG                TTTTCTCGTTTCTAG  64 41
        fabD NONE
        fabG 1968333 .. 1968361 + -13.3  -3.53298   GTGGAATGTATATGG        GGTAAATTCGCAA AAA TTGCGAATTTTCC        TTAGTTTGGGGTGGT 100 21
        acpP 1968796 .. 1968814 + -13.2  -5.05601   TAAGTAGCGAAAAAG             CGGCTCTA CTC TAGAGCCG             TTTTTGTATCTCCTA 100 45
        fabF 1970133 .. 1970158 + -13.4  -3.96216   GTTAAAAATCGATTA         GAAAGGCAGC AATATA GCTGCCTTTC          TTGTTTGACTACAAC 100 60
        pabC NONE
        mltG NONE
JN178_RS08800 NONE
        holB NONE
JN178_RS08810 1974599 .. 1974618 +  -2.9  -3.57144   TTGTTCTCTTTGGCA            CG-TAAGC AATCA GCTTAACG            TTTGAAGGTAAGGAG  49 8
JN178_RS08815 1975204 .. 1975219 +  -8.2  -3.87346   TTATCCCTTAAAAAA              GCCCCT ATAT GGGGGC               TTTCGTAATTCTAAT  77 30
        hisD NONE
JN178_RS08850 NONE
JN178_RS08855 NONE
JN178_RS08860 1985104 .. 1985121 +  -9.1  -5.45652   TTTTTGTTTTGATTG             GGCAGTC TTTT GGCTGCC              TTTTTTATTGAAAGT 100 58
JN178_RS08885 1991423 .. 1991458 +  -7.8  -3.96148   TCATTTTCCCTCGAA    G-CTACCTAGCAAAA TTCTCGT TTTTGCTAGGTGGGC    TTTCTGATAACCCAA  74 90
JN178_RS08890 1994353 .. 1994381 +  -8.2  -4.56133   TAAACGCTGAACAAA       CTGGGC-AATCAC TAGG GTGATGAGCCCAG        TTTTGGTTCTTAGCG  86 65
JN178_RS08895 1995106 .. 1995149 +  -2.5  -3.75665   GACTAAAATCCAGCG GTCCATCGTTTA-CTACTAT TTAAT ACAGGAGATAAGCGATGGTC TTTGATCGGGTATGG  51 107
JN178_RS08900 NONE
JN178_RS08905 NONE
JN178_RS08910 NONE
JN178_RS08915 1997558 .. 1997581 +  -2.3  -3.42503   CAAACCAAGGTTGAA          GGCCGGGGT AGTGAA ACCCTCGTC           TTGTGCATATTCGAG  47 342
JN178_RS08935 1999906 .. 1999920 +  -4.2  -4.77157   TGCTATATATTTTAA               GCTAAC GTT GTTCGC               TTTTTCCTAACTTGC  71 21
JN178_RS08950 2002810 .. 2002825 +  -4.6   -3.8613   AATCTGAAAGTACGC              GCATGC CATT GCCTGC               TTCTTGCTCTTTGCG  59 165
JN178_RS08970 2007031 .. 2007046 +  -6.8  -5.59655   AAAATTACAAAAAAA              GGTCTC ATAA GAGGCC               TTTTTTATTGGTTTC  90 113
JN178_RS08975 2007721 .. 2007767 + -12.3  -3.71552   ACCAGCCATAAAAAA GCGGGTTAGCAGAACAAACAC CTAGT GTGTATGTCATGCCAACCCGC TTCTATTAGTAAGCT  90 63
JN178_RS09005 NONE
JN178_RS09010 NONE
JN178_RS09015 NONE
JN178_RS09020 2020270 .. 2020285 + -10.4   -5.5604   CGATGCATAAAAAAA              GCCTGC GCAA GCAGGC               TTTTTTGTTGATTAG 100 31
JN178_RS09030 2023115 .. 2023130 + -10.4  -5.67967   CCAGCAATAAAAAAA              CCGCTC AAAA GAGCGG               TTTTTTTATAATAGT 100 69
JN178_RS09060 NONE
JN178_RS09065 2029188 .. 2029212 + -11.4  -5.24531   CCTAAAAAGACGAAA          GGCTGCCTTC ATCAA GATGGCAGCC          TTTTTTGTAGGGAAT 100 64
JN178_RS09075 NONE
JN178_RS09080 2034398 .. 2034415 + -12.7  -6.23545   TGCCGTAATTTAAAA             GCCGCTC TATT GAGCGGC              TTTTTTTTGTTTGCA 100 53
JN178_RS09085 2034870 .. 2034895 + -11.9  -4.03234   AGCCGCATAAAAAAA         GCGGTAGTGTT TAAA AACACCACCGC          TTTCTATGCAAGCCA  95 31
JN178_RS09100 NONE
JN178_RS09105 NONE
JN178_RS09110 NONE
JN178_RS09115 2042629 .. 2042653 +  -2.2  -2.75826   TGTGTAAGTAATAGG         CTTATCGCATA TCAC TA-GCGAAAAG          TAGTGTATTCACCTA  41 50
JN178_RS09120 2044409 .. 2044434 + -13.4  -3.23216   AAATTGTTTTACTAA         GAGGCTTCAC GCTGAA GTGAAGCCTC          TTAGTAATACTCACG 100 39
JN178_RS09145 NONE
JN178_RS09150 2051871 .. 2051898 + -15.8  -2.91873   CCACATTGTAAAAAA        TAAAAAAGGGGC GTAT GCCCCTTTTTTA         TGCTTTGCAACTCAT 100 30
JN178_RS09160 2055348 .. 2055368 + -18.3  -5.81412   TTGAGTGTGCTTGTT            GCCCCGCGA ATA TCGCGGGGC            TTTTTTTTGCCTAAA 100 109
JN178_RS09170 2058650 .. 2058678 + -16.1  -5.94713   ATAAGGCTGAGTGTT        GTGCGGTAGGCTT CTA AAGCGTACCGCAC        TTTTTTTTATGGGAT 100 60
JN178_RS09180 NONE
         ggt 2061986 .. 2062014 +  -8.9  -4.68994   TTAGACTGTAAGGAA        TGGGAAGTTGCTT TTA AAACGACTTCCCG        TTTTTACCTAATAAT  86 57
JN178_RS09260 2070978 .. 2070994 +  -4.3  -3.21912   TTCCATACCCGAAGA              CGTGCTC AAT GATCGCG              TTGGTACATTGGCGC  52 258
JN178_RS09270 2071543 .. 2071564 +  -5.9   -4.4521   CGACTACAGTTGTTA           GGAGACATT CTTT AATATCTCC            TTGTTTTTGAATCCT  72 149
JN178_RS09330 NONE
JN178_RS09335 2080941 .. 2080953 +  -5.5  -2.52464   AGCCTCTATATGTGT                TTGCC GCA GGCGA                TGCCTTACGGCAACA  50 361
JN178_RS09355 NONE
JN178_RS09360 2086833 .. 2086860 +  -2.1  -3.14848   TTAAAGGGTTAAGTC       GCAGCC-GAT-GA GCTA TCGATTAGGCTGC        ATTTTACTGGCAGGC  43 15
JN178_RS09365 2088048 .. 2088061 +  -4.5  -2.50778   AAGCCAATTAAAATG               GCAGT GCGT GCTGC                AATTTTCGCTTGTCG  46 517
JN178_RS09415 2098649 .. 2098664 +  -6.8  -5.71712   AATTGATTAAAAAAA              CCGGAG TTTA TTCCGG               TTTTTTTATGTCAGA 100 49
JN178_RS09440 NONE
         hda 2106540 .. 2106554 +  -7.2  -3.10622   TCATTTCTAATTCAT               CACTTA CCG TAAGTG               TGTTCGATCCGTCTT  60 89
JN178_RS09470 2110693 .. 2110722 +  -5.7  -4.01411   AAGGGCGTAGACCTC       CGCTTTGCTTTGA TGCA TCTGAGAAAAGCG        TTTGGCTTTTTGATA  65 187
JN178_RS09480 2113400 .. 2113414 +  -8.5   -5.2112   CAACGGAATAAAAAA               GGGGC AATGA GCCCC               TTTTTTAGTGGTGTT 100 44
JN178_RS09490 2115618 .. 2115636 +  -8.1   -4.2558   CGTAGCTAAAAAAAA             GCCCCTT TAAAC GAGGGGC             TTTTAATACACAGTG  82 484
JN178_RS09510 NONE
        bamC NONE
        purC 2119872 .. 2119890 + -10.3  -5.42975   TAATCGAATTGAAAA             GAGGACC ATAGC GGTCCTC             TTTTTGTTTCTATAA 100 53
JN178_RS09525 2120927 .. 2120937 +  -2.4  -3.47227   ACAGTGTGTTTTAAA                 AGCG GTA CGCG                 TTGTACTCGTTGAGA  46 108
JN178_RS09530 2123334 .. 2123374 +    -9  -2.83915   AATAAGGGCTCAGAA  TAAAGCGGGGTTAATGGA TAACT TCCATAAGCCCCGCTGAA  CGTTTTTTATCAAAA  68 44
JN178_RS09550 2127821 .. 2127852 +  -3.8  -4.31085   CCATTTTTTAATAGC      GGTAGCATTTTCTGC ACG GTAAAAAATGC-GCC      TTTTACATTAATATC  64 506
JN178_RS09560 NONE
JN178_RS09565 2129782 .. 2129796 +  -5.6   -5.1101   CCACATCGACTACAT               CGATGC GAA GCCTCG               TTTTTTCACTGCTCA  80 272
        gyrA 2137772 .. 2137797 + -11.9  -4.62302   TATCAGTGTTCTTTC         AAACAAGCGGC TTAA GCCGCTTGTTA          TTTTTACAGGTGTTG 100 71
        serC NONE
        aroA 2140271 .. 2140297 + -15.3  -2.80245   AATTAGTCAAATGTA         CAATGCCACCT TGTTC AGGTGGCATTG         CTTATCTTGAAGTAA 100 104
         cmk 2141061 .. 2141081 +  -5.4  -3.13504   CGCATCCAAAGCAGT            GTTGCTAC AGGAA GTGGCGAC            TAATTTTAATAACCC  54 56
        rpsA NONE
        ihfB 2143197 .. 2143212 + -10.4   -5.1675   ATAAAAAATTTGAAA              GCCGCT GAAA AGCGGC               TTTTTTAATACATCC  93 37
JN178_RS09620 NONE
JN178_RS09625 NONE
        lapB NONE
        pyrF 2148037 .. 2148063 + -10.3  -5.95166   AACCACATAAAAAAA        GCTCGGA-ATGT GAAA ACATATCCGAGC         TTTTTTTTAGTTGAG 100 51
         lrp 2150010 .. 2150022 +  -2.7  -3.60296   TAGGCTGTGCAAAAA                TACAG TGT TTGTA                TTTCGCCTAAGGATA  49 73
JN178_RS09650 NONE
        lolA NONE
JN178_RS09660 2155038 .. 2155051 +  -6.7  -2.85996   GTTGTCAAAAGGCAT               TGCAC GCTC GTGCA                CTTTAGTGCCTAATA  57 44
        crcB NONE
        serS 2156838 .. 2156862 + -17.9  -5.65927   ATGCTAGATGTTAAA          GGCTCAGCGGT TAC ACCGCTGGGCC          TTTTTTGTTTGCATC 100 72
JN178_RS09675 2157517 .. 2157538 +  -3.7  -3.89822   ATTAGTTAAAATTAC           CTCACTTTT TACA ATAAGTGGG            TTTATAAAATGAGTA  57 135
JN178_RS09680 2158036 .. 2158050 +  -7.2  -2.73124   TCGCAAGCATAGCTG               TGTTGT GTA ACAACA               GTTTAGGCGCTACGG  60 29
JN178_RS09685 NONE
JN178_RS09690 2158786 .. 2158807 +  -3.9  -3.87373   GTACGTCATACTTCT           GACAT-ATAA TTC TTATTATGTC           TTTATGCAAAGTGTG  57 138
JN178_RS09695 NONE
JN178_RS09700 2159952 .. 2159983 +  -8.8    -4.946   CGAGATACGAAAAAA      GGTTATTCGTAACC AATT GGTTATGCGTAACC       TTTTTCATGTTTACT  91 46
JN178_RS09730 2162496 .. 2162513 +  -8.4  -6.00086   GCCATATCCTAAAAA             CCCGCA CACTGT TGCGGG              TTTTTTTTATACTCT 100 37
JN178_RS09735 2163394 .. 2163406 +  -2.7  -3.37513   ACAAGTCACACCTTT                TTACT CTC AGTAG                TTCGTCTTGGAGTAT  46 49
JN178_RS09740 2163789 .. 2163804 +  -3.2  -3.34962   CTTTATACTAAAGTA              TACGAC CAGA GTCGCA               TTGTGACCTGTAGCC  48 44
JN178_RS09745 2165656 .. 2165666 +  -3.2  -4.62471   TTATTTGCTGTTAAG                 CGTG GAG TACG                 TTTTTGCGCATTAGC  66 349
JN178_RS09755 2166921 .. 2166945 +  -9.4   -5.4251   AGATCAGTGTGTAAA         GCGGTAGA-AC GATT GTCTCTACCGC          TTTTTTGTATCTACG 100 43
JN178_RS09760 2167860 .. 2167880 +  -3.3  -3.63895   TGAGCATATTGTTTA            TCAAATCAG CAC TTGATTAGA            TTTAAAGTAATTAGC  51 79
JN178_RS09765 2168042 .. 2168059 +  -8.4  -6.00086   GCCATATCCTAAAAA             CCCGCA CACTGT TGCGGG              TTTTTTTTATACTCT 100 37
JN178_RS09770 2168434 .. 2168451 +  -8.4  -6.00086   GCCATATCCTAAAAA             CCCGCA CACTGT TGCGGG              TTTTTTTTATACTCT 100 37
        ovoA 2171184 .. 2171195 +  -3.6  -2.73124   GCTTAAAATTTGCTG                GCGT ATCA GCGC                 GTTTCCCAAGTGCGC  45 154
JN178_RS09780 2172364 .. 2172376 +  -3.4  -2.70946   TATATAAAATTTTAT                CCTA TCATT TAGG                TCGTATAATGTTCTC  43 79
JN178_RS09785 2173301 .. 2173340 +  -2.2   -3.3903   GGACGAGTGATTTTG  GGGCGGTTTGTTTGTAT CGGTAAA GTAC-AGCGAACAGCCC  TTAGTTCAGTAGTTA  46 125
        uvrY NONE
        uvrC NONE
        pgsA NONE
JN178_RS09805 2176810 .. 2176822 +  -3.4  -2.56596   CGTTTCCCGCTCCAA                TCTC TTAAT GAGA                TAACTTAATCAGCGC  43 27
JN178_RS09810 NONE
JN178_RS09815 2177560 .. 2177570 +  -5.4  -3.11476   GCTTTAAATGCTAGG                 TCTC GAG GAGA                 TGCTTTTCGATGAAT  54 518
JN178_RS09825 2178184 .. 2178210 +  -7.3  -4.62302   AACATGCGCAGCCTT         GTCGAGTGGTT TAAGT GACGACTCGAC         TTTTTGAGCATCTTC  79 72
JN178_RS09835 NONE
         tpx 2180682 .. 2180698 +  -2.9  -2.79912   CAAATTATGAAGCGG              CAATAGC AGC GCTGTAG              TACATTGTTTTTAAA  42 9
JN178_RS09845 NONE
        cobB NONE
JN178_RS09855 NONE
JN178_RS09860 NONE
JN178_RS09865 NONE
JN178_RS09870 2185234 .. 2185253 +  -8.6  -3.93136   TTTGTTCTGCTATTC            GGGCGATAG TTT CT-TCGCCC            TTTGTGCATAACTCT  76 55
JN178_RS09935 2197080 .. 2197099 +  -7.8  -5.10877   AACGTGTTAAAAAAA            CGGCTAGC CTAT GCTAACCG             TTTTTCATTTATTCT  89 45
JN178_RS09955 2201685 .. 2201704 + -13.6   -3.1012   GAAGAAGAAACAAAA            GCGGTGTC CTAA GACACCGC             TAGTTTTCAAGCTTT  95 14
JN178_RS09965 2202791 .. 2202816 +  -4.9  -3.10981   TTAAAACGCTCTGCT         TAGTTTTTATA AATA TATGAAAGCTA          TCGTTGTTTTAGACT  52 54
JN178_RS09970 2203367 .. 2203380 +  -3.8  -4.19324   GAGAAAAATGCAACG               CGGT CTCACC ACCG                TTATTTATATCATTT  62 108
JN178_RS09990 NONE
JN178_RS09995 2209835 .. 2209858 + -15.4  -2.62192   CTAGAAATAGACATC          GTGTTACCGC GCTA GCGGTAACAC           ATTGGTTGACTGGAG 100 11
JN178_RS10055 2227231 .. 2227242 +    -3  -2.80791   TCAATATTCTCTTCT                TTCA TACG TGAA                 TACGTTTTATAGATC  41 359
JN178_RS10075 NONE
JN178_RS10080 2233199 .. 2233209 +  -5.4  -3.83771   AGCGATTATTTTTTC                 TGAG CCA CTCA                 TTTAATAGCTTTATT  62 83
        fabA 2234154 .. 2234169 + -10.4  -3.45152   TTAAGACAGAAAAAA              GCCCCT TTGC AGGGGC               TCTTCCTTTTGCTTA  81 58
JN178_RS10235 2278635 .. 2278650 + -11.8  -5.76949   CTTAGCTACTAAAAG              GGCCGC AACT GCGGCC               TTTTTTTTCAACCTG 100 50
        pabB NONE
JN178_RS10255 2284137 .. 2284150 +  -2.4  -2.80779   TGTATTGTAGTTGTT               TGCA CTCAGA TGCA                TGATCTTACTATTAA  41 119
JN178_RS10260 2285593 .. 2285608 +  -7.5  -5.34555   CAAAATTATAAAAAA              GGGGC AATTAA GCCCC               TTTTTTATAATCTAA 100 56
JN178_RS10270 NONE
JN178_RS10275 2288369 .. 2288381 +  -7.7   -3.2241   CCGAAAAAGAAATGG                TAGCG TAA CGCTA                ATTTTGTAAGGGGTA  67 23
JN178_RS10280 2289633 .. 2289647 +  -5.6   -3.1319   CAGTGACAGACATTC               GCGCCA CAG TGGCAC               TTGGCTAAGTTTTGC  54 423
JN178_RS10290 NONE
JN178_RS10295 2291666 .. 2291685 + -12.2  -4.13903   TTTAATCATATTTTA            GAGGGCAT CTTT ATGCCCTC             TTCTTTCATTATGTC  95 36
JN178_RS10300 2293166 .. 2293182 +  -5.1   -4.9755   AAAATTAATAAAAAA              GCGAG CCCTGAA CTCGC              TTTTTAGTTCTATAT  74 102
JN178_RS10320 2297287 .. 2297300 +  -3.8  -4.57073   TGCCTGAATGCCGAT               GCAC TCATGT GTGC                TTTTTCAGCCAAATC  66 310
JN178_RS10340 2301488 .. 2301499 +  -5.8  -2.64144   CGACTATTACAGCTT                CCCT ATCG AGGG                 CTATTTAAGTCCAGA  54 102
JN178_RS10370 2307605 .. 2307644 + -14.6  -3.57543   CTGGCTTTTGAAAAG  GTATAAAGAAAGGGGCTTA TAT TTAGCCCCTTTCTTT-TAC  GTTTTTCGTATTTTA 100 48
JN178_RS10390 NONE
JN178_RS10395 2312620 .. 2312637 +  -9.8  -5.56673   CAAAACTAAAAAATA             GGCGCC AACACC GGCGCC              TTTTTTATTATCAAT 100 32
JN178_RS10420 2318361 .. 2318386 +  -2.6  -4.24711   TAGCAAGGGTTCAAA         CACATAC-CTG ATGTC CAGAGCATGTG         TTTGTTGCGGTTTTA  58 15
JN178_RS10430 NONE
JN178_RS10435 2321244 .. 2321254 +  -5.4  -3.04322   TCTTGATTGAAAAAA                 CTGA GAC TCAG                 TGTTGCCCCGTTCCG  52 350
JN178_RS10450 2323055 .. 2323071 + -12.3  -5.67063   ATAAAATGTAAGAAA              CGCACCT AAC AGGTGCG              TTTTTTTATGCTGGA 100 54
JN178_RS10475 2331367 .. 2331386 +  -9.3  -5.18355   GCCGCACAATAAAAA            GCCGCTA ATAAAA TAGCGGC             TTTTTGATTTTTAAC 100 68
JN178_RS10485 2334409 .. 2334426 +  -5.5  -4.99134   TAATCAATAAAAAAA             GCGCC ATTAATTA GGCGC              TTTTTAGTTTCCGGT  76 64
JN178_RS10610 2376713 .. 2376743 + -13.5  -3.56643   TATTATTATTGGTAG       TAAAAATAGCGCC TGACT GGCGCTATTTTTG       TTTGAGGAGTATCAA 100 53
JN178_RS10615 2377269 .. 2377289 +  -7.5  -3.05816   TTAATCGAATAGAAA            GGGCGTGTT GTT AATTCGCCC            TTCGCTAAACACTAC  65 111
        tcdA 2382144 .. 2382155 +    -3  -5.04987   ATAAGATAACAAGCT                GTAT TGGC ATAC                 TTTTTTCGCAGTATT  70 65
JN178_RS10645 2382660 .. 2382678 +  -7.5  -2.84732   CGTCATCTTTGGGGT             GAGGATT TGCCC AATCCTC             TATCATCCATTTAAG  59 61
        rimO 2386562 .. 2386581 + -13.6  -6.01725   AATAGTAAACGGAAA            GAGGCGCT AGAA AGCGCCTC             TTTTTTATTTTTATT 100 36
JN178_RS10695 2394658 .. 2394680 +  -9.2  -5.63103   AGCAGAAATAAAAAA           GCGTACCATT TAA AATGATACGC           TTTTTTTGATTAAGC 100 54
        cysZ 2402903 .. 2402928 +   -12  -3.92542   GTCAACAACTTCAAG         CGGACTCAAT CAGTGT ATTGAGTCCG          TTGTTTACGGATGCC  95 99
         cdd NONE
JN178_RS10735 2406880 .. 2406918 + -12.7  -4.08221   TACGGTCTTAGCTTA   AGAGAAACAAGGTGATA TTTGC TATCACCTTGTTTTTCC   TTTCCTTATCTTCAA 100 46
JN178_RS10860 2423551 .. 2423567 +  -7.3  -3.44443   ACACACTGAATGTTT              TTACGGT CTT ACCGTGA              TTAATGTTGTATAGC  65 234
JN178_RS10900 2430957 .. 2430970 +  -3.8  -3.17685   CCAATTGGCTATTTG               GCAC ATATAC GTGC                TTACCTGTGTAATTG  48 474
JN178_RS10930 2438015 .. 2438046 +    -3  -5.18371   GGAATGTAAACAAAA      CGGCAATAATTGCGT ATT ATGCT-TAATTGCCG      TTTTATTTTCTGGCC  73 109
JN178_RS10935 2439065 .. 2439089 +  -5.7  -3.38224   GCCCCCCCCATACGA          GTATGAACCCA ACC TGGCGTCATAC          TATTTACCATAACGT  56 158
JN178_RS10950 NONE
        gdhA 2443520 .. 2443532 +  -3.4  -2.84794   AGAGTAAGCATTGTT                TTCC CGATT GGAA                TAGTTCTCGCATTAG  44 158
JN178_RS10960 2444118 .. 2444136 +    -6  -5.67063   AATTGAATACAAAAA             TGCCAG CTAAACA CTGGCA             TTTTTTTATAATCAA  89 107
JN178_RS10975 2448891 .. 2448908 + -11.3  -5.30155   CAACAAACAAAAAAA             CCGTAGC ATTA GCTACGG              TTTTTTAATTGGTGC 100 312
        yhbY 2455643 .. 2455675 +  -2.8  -4.51994   GCCAAAATAGTTACT     CATTA-GGTGTCG ATAACCTG CGGCACCGTAGTG      TTTCTTCTTACTTCC  60 31
JN178_RS11020 2456534 .. 2456549 + -11.8  -4.24294   TCGTAAAATAAAAAA              CCCGCC ATCT GGCGGG               TTTTACATAATTAAT  93 43
JN178_RS11035 2460762 .. 2460805 +  -3.9  -3.42078   ACAATAAAAATGTCC TAACCTAGTGTTAAGCTAT TGAGGC ATGGCTTCGCGCTGGGGTA TTCTAATGGGCTATG  51 79
        leuS NONE
JN178_RS11045 NONE
        holA 2465075 .. 2465085 +  -2.4  -3.35046   TGGGAATTGATCTTC                 GCGC TGT GCCC                 TATTTGGAGGCCTAG  45 0
        nadD NONE
        rsfS 2466152 .. 2466179 +   -15  -3.57792   TGTAACGTCTTTAAA        CGGCTGGATATC GCAA GATATTCAGCCG         TTTAAAAGTGAATAA 100 62
        rlmH NONE
        mrdA NONE
        rodA NONE
JN178_RS11080 2470989 .. 2471002 +  -2.4   -3.0634   TTGGGTCGCTCTTTA               GGTA GTTCAA TACC                TGTTAGAGTAAGCTT  43 294
JN178_RS11085 2472278 .. 2472303 + -13.4  -5.71712   AACCTAGTGGTGAAG         CGGCCAGATT TGTTAC AATCTGGCCG          TTTTTTTATATGAGA 100 62
JN178_RS11090 NONE
        lipB NONE
        lipA 2474281 .. 2474296 + -10.4  -5.82281   GTGTTTAATTAAGAA              GCGGTG CTAT CACCGC               TTTTTTTGTGTCTTT 100 75
        ansA NONE
JN178_RS11110 NONE
JN178_RS11115 NONE
JN178_RS11120 2477600 .. 2477610 +  -6.8  -2.57003   GGCCGATGCTATCTG                 CTCG ACG CGAG                 GTACTTTTTCATGCT  55 332
JN178_RS11135 2478999 .. 2479030 +  -3.1  -3.43217   TATACGTTTATACGC     TGAACGCGTTGC-GC CAAA GCAGCAA-GAGTTCA      TTGATTAAATTTAGA  49 95
        sppA 2481030 .. 2481054 +  -5.6  -5.47159   GATTTATCACCAGAG          CAGCGTCAAG ATATA CAAGACGCTG          TTTTTGTTTGTTACG  83 130
JN178_RS11145 2481612 .. 2481625 +  -3.7  -3.66216   TAAACGCCGTTTTTA               GCAGG TGAG CCAGC                TCTTTATACTTTGGC  53 137
        trxB NONE
JN178_RS11160 NONE
JN178_RS11165 NONE
        infA 2485303 .. 2485321 +  -9.5  -5.28778   AACGCATTGTTAAAA             GCCCGGT CTATT GCCGGGC             TTTTTTGTGCATAGT 100 58
        cspD 2488461 .. 2488491 + -13.4    -3.315   GTTAAGAAAGAATTT       TAAAGGCCTGGCTT TCT AAGCCGGGCTTTTG       CTTTTCTGTCACCCT 100 36
JN178_RS11195 NONE
        mnmA NONE
        hflD NONE
        purB 2495463 .. 2495480 +  -7.7  -5.76633   TTAGTACATTAAAAA             CGCGG-TC ATT GAGCCGCG             TTTTTTTATATGTGC 100 54
JN178_RS11215 2496284 .. 2496308 +  -2.2  -3.28791   TGACTGGAAAATACC         GCG-TGTATCA CTGA TAATACATCGC          TTATCGAGCCCACCT  45 12
JN178_RS11220 NONE
JN178_RS11225 2498418 .. 2498429 +  -5.8  -3.42605   TATAGTTATACATTT                GAGC AATT GCTC                 TATATTTTAGATAGC  60 502
JN178_RS11235 2499438 .. 2499459 +  -5.9  -3.08464   AGTCTTTAGCGCATG           GC-GCACAAT ATT GTTGTGCAGC           TTGAGTAGGTCATGA  57 373
JN178_RS11240 NONE
JN178_RS11245 2502326 .. 2502345 + -11.4   -5.4251   TGGATGAAATGAAAA            GGGAGGCT TAGA GGCCTCCC             TTTTTTATCTATAAA 100 81
JN178_RS11260 2506306 .. 2506349 + -15.6  -3.35224   ACTAATTATGTAACG CGTTGCTGTTTTGGTT-TCAG AAA CTGGCAACCAGAACAGCAATG TATTTAACGCGCTAT 100 36
        betT 2514480 .. 2514490 +  -8.2   -4.1822   TGCTTAAATAGCGTA                 CGCG TTA CGCG                 TTTGTTGGAATAAGA  79 30
JN178_RS11285 2515034 .. 2515051 +  -5.5  -5.95946   ACCTTTAATAAAAAA             CGGCC GTTTCATA GGCCG              TTTTTTTATTGTTAA 100 74
        smpB 2516525 .. 2516543 +   -11  -3.61715   GAAAGAATGATGAAA             CACAGCGT GTA GCGCTGTG             TTCTTAACCCACATC  83 14
        ssrA 2518273 .. 2518294 + -12.3  -5.38054   CCAATTCCTAAAGAG           CCCCGTACC GCAA GGTATGGGG            TTTTTCTTTATGCCA 100 38
JN178_RS11320 2520532 .. 2520545 +  -9.5  -5.48063   GTATTAAGCCTGAAA               GCCGC GCAA GCGGC                TTTTTTGTGTTCGAT 100 44
JN178_RS11325 NONE
JN178_RS11330 NONE
JN178_RS11335 NONE
JN178_RS11340 2526417 .. 2526442 +  -9.7  -5.20333   TTCTTTAGCACAAAA         GGCTCGC-TCGT TTT ACGTTGCGAGCC         TTTTTATTATCAATA 100 55
JN178_RS11345 2527446 .. 2527479 + -16.3  -3.40139   CAAAGCGAAAAATGT     CAGAAAAAGCGCAGCA TAA TGCTGCGCTTTTT-TG     CTTTTATTGAGGTTA 100 42
JN178_RS11355 2529956 .. 2529966 +  -4.6  -4.30987   CGCCAATGCTATTAA                 GCGC GAT GTGC                 TTTCTTCTCCACCAT  64 463
JN178_RS11365 2531876 .. 2531903 +    -4  -3.32963   GGTAGCCAATACGCT        GCCCCGCCAACG CCAA TGTTTGTTGGGC         TTCTAGGCTAAGAGT  50 254
JN178_RS11380 NONE
JN178_RS11385 2535378 .. 2535394 +  -7.9   -3.6106   GGTATGGTTTCATCG              CTGTGCG CGG CGCGCGG              TTTGAAGCTGTTAAA  69 258
JN178_RS11425 2545494 .. 2545518 + -13.6  -3.45945   TGCGATTACGCTATT          TGGCAGCGGC ATAGA GCTGCTGCCA          TTCGTTCTCGCTCAC 100 46
JN178_RS11435 2548656 .. 2548670 +  -8.5  -5.25803   CATTTGATAAAAAAA               GCGCC GTTGA GGCGC               TTTTTTATGGGGCTT 100 72
JN178_RS11450 2551487 .. 2551501 +  -5.7   -3.9377   CAATAGCAGCCATAT               GGCTT TCGAT AAGCC               TTTGATTAGGATTGT  63 253
JN178_RS11485 NONE
JN178_RS11490 2560809 .. 2560834 + -10.4  -4.13654   AGGTAGTAAGCAAAA         GGCCCACGCA TTATCT TGAGTGGGCC          TTTGTACTTTAGAGC  85 117
JN178_RS11505 2565321 .. 2565363 +  -3.5  -3.92996   AATTAGCGATAACAT GGCGTTGCGCGAAAATAAAA AAGG TTTTTCTTAC-CGCAACGTC TTGTTATCTGTCACA  55 71
JN178_RS11510 2566327 .. 2566341 +  -8.5  -4.53419   CGAATAAAATAAAAA               GGGGC TTATC GCCCC               TTTCTTATTGTCGTG  86 64
        rluF 2567315 .. 2567334 +  -6.4  -3.62597   CTATCGCACTACGAT            GCCAATAC AGAA GTACTGGC             TTCTTACGAGATAAC  65 199
JN178_RS11520 2569671 .. 2569685 + -12.8  -4.63932   TCGCGCATAAAAAAA               GCGCCC ATT GGGCGC               TTTTCTTGAAACCTA 100 66
JN178_RS11590 2586819 .. 2586830 +  -4.4  -2.56596   TGTTAGTTGTCATTC                CCTT AACG AAGG                 TGCATTAATGCAAAA  47 6
JN178_RS11595 2587552 .. 2587567 + -10.4  -3.79849   GCAGAAACAAAAAAA              CCCAGC AAAT GCTGGG               TTCTTAATGTGGTTG  83 53
JN178_RS11620 NONE
JN178_RS11625 2592849 .. 2592879 + -11.3  -3.37915   CGCCGTCATTTTAAA       GACCAAAAGAGGC ATCAC GTTTCTTTTGGTC       TCTTAGTTTCTCAGC  82 59
JN178_RS11635 2594470 .. 2594502 +  -4.8  -4.37534   ACTAAAATGTTAACG      GTTGCCTTGTAGTG ACACA CCTTACAAGGCGCC      TTTTAGTATCGCTTT  67 36
JN178_RS11640 2595157 .. 2595184 + -13.6  -5.14477   GGTATCTCTGCACGG        TAAGAAGCGACC TTCG GGTCGCTTTTTA         TTTTTTCACTCTGTC 100 83
JN178_RS11645 2595846 .. 2595861 + -11.8   -5.7827   TCTGCACTTCAAGAA              GCGGCC CACG GGCCGC               TTTTTTCTTTGTGTT 100 87
JN178_RS11650 2599037 .. 2599069 + -12.2  -4.41633   AAAACTTGAACAGAA      GCAAATAAAGCACA TTTTT TGCGCTTTATTTGC      TTATTTTTCAACCTG 100 56
JN178_RS11655 2599742 .. 2599757 + -10.4  -5.85244   CTGCAGTGACAAATA              GCGACC TCCG GGTCGC               TTTTTTATTTTAATT 100 92
JN178_RS11665 2601079 .. 2601095 + -13.7   -5.4433   GAAAGCTGCACTAAA              GGCCCCT TCT AGGGGCC              TTTTTCTTTATCTAT 100 86
JN178_RS11670 2601848 .. 2601881 +  -9.1   -3.0386   TACAGATTCTAAAAT     GCTTTCGAGACGAT GAAATAG ATCGTCTC-AAAGC     TCATTTGTACATCTT  69 29
JN178_RS11675 2603150 .. 2603162 +  -5.5  -4.17316   GTAATAGTCGTAATA                GCGAC TTC GTTGC                TTGTTTTCCAACGCT  67 308
JN178_RS11685 2605827 .. 2605843 + -13.7  -5.75538   GAAAGCTGCACTAAA              GGCCCCT TCT AGGGGCC              TTTTTCTTTTTTACG 100 86
JN178_RS11695 2607188 .. 2607207 + -13.6  -2.81193   GCAGGATGCCGCTCT            GAGGCCTC TTCG GAGGCCTC             TCCCTTTTCTAGCTT  93 95
JN178_RS11720 NONE
JN178_RS11725 2615469 .. 2615502 +  -8.9  -3.26449   GGAACAAACAAAACC     GATGAACGAGGCGAGT GCA AC-CGCCTCAATCATC     TTAACTTCTCTAACA  72 118
JN178_RS11730 2616164 .. 2616191 +  -2.6  -4.17296   GAGTACCTGAGACAT        TGCAGTGTGCGT GTCA GCGATTACTGCA         TTTCTCTGTGTGACG  58 383
JN178_RS11740 2619400 .. 2619426 + -11.7  -4.76802   GCTCAGCAGAAAAAA        GCCCGATG-GAA ATTA TTCACATCGGGC         TTTCTTGTTTTTCAC 100 51
JN178_RS11765 2626367 .. 2626400 + -11.1  -2.74371   AAGTGTTGGTGTCAC     GTTCAGAAAGCGCTT TTAA ACGCGCTTTCTGAAA      TGGTGTTGGCACATT  78 7
        hemN 2630766 .. 2630800 +  -3.6  -3.53012   GTGTTTTTGTCGATT    GCCTGCG-TATTAGT ATCAAC ACTCACATCGCAGGC     TTTAACAGCAAAACG  50 299
JN178_RS11825 NONE
JN178_RS11830 2637099 .. 2637125 + -16.7   -3.8062   AATAGACAATGGCAA         CATGCCGCTAG TAACT CTAGCGGCATG         TTCTTATAACGATTG 100 43
JN178_RS11840 NONE
JN178_RS11845 2641472 .. 2641483 +  -3.6  -3.06696   AAAATGATACACAAA                CGCG CTTG TGCG                 TATATTGAAAGAACG  48 61
JN178_RS11850 2642715 .. 2642735 + -11.2  -4.86862   CCAACTAGACCAAAA            GGGACAAG CTTTT CTTGTCCC            TTTTAATTTTTTAAG  93 44
        norR 2646794 .. 2646827 + -10.4  -3.78679   ACCGCTTAGGCATAA     GCGTAACGCGTGCTA TTAGT TAGCACGCGT-ACAC     TTCTATTCGTCTTTT  83 3
JN178_RS11895 2650557 .. 2650585 +  -9.6  -3.41448   AGAAATTGCATTAAT        CAAACGCGCTAG GCGTG CAAGTGCGTTTG        TGCTTTTTTAGGTTC  77 41
JN178_RS11905 2652018 .. 2652038 +  -5.4  -3.20832   GGTGTAAACCAATCC            GCGGTGAA ACAAG TTTGCCGC            CTTTTCGCTTTCAGG  54 212
JN178_RS11925 2662447 .. 2662466 + -12.2  -5.00884   CTTAGTCAAAAAAAA            GGCTCTAC ATTT GTAGAGCC             TTTTTTAACCAAAGT 100 51
JN178_RS11965 2672652 .. 2672671 + -13.6  -5.38054   AACAATTCAAAAAAA            CGCCCACA GTTT TGTGGGCG             TTTTTGTTTGTGGGA 100 103
JN178_RS11970 2673638 .. 2673658 +  -6.9  -5.06414   AGAGACAAGAATAAA            GGAGAGT TGTTGAT ACTCTCC            TTTTTATTCGCAGAA  85 43
JN178_RS11980 NONE
JN178_RS11985 2675735 .. 2675745 +  -5.4  -2.77899   CATAAATGGAATGAG                 TTCC AGA GGAA                 TCATTACTAAACCAC  50 277
JN178_RS11995 NONE
JN178_RS12000 NONE
JN178_RS12005 NONE
JN178_RS12010 NONE
JN178_RS12015 2682340 .. 2682352 +  -4.7  -2.83822   AAGGCCCGCTTTTTT                CACGC TTG GCGGG                TCGTTATAGAGTGAG  50 73
JN178_RS12020 NONE
JN178_RS12025 NONE
JN178_RS12030 2683688 .. 2683700 +  -3.3  -3.41073   GCGATTAGCCGCACG                GCGCT ACT ATCGC                TATTTCAATAAAATC  49 2
JN178_RS12035 2684356 .. 2684380 +  -9.4  -5.66684   TTCTTGTGTTGTAAA         GCGCG-TTTCA CTTG TGAAATCGCGC          TTTTTTTATCACTTA 100 61
JN178_RS12040 2685384 .. 2685396 +  -6.3   -3.5393   AGCGTGCCCTTAGCA                TCTTC TAA GAAGA                TTTGGCAAAAGTAAT  60 193
JN178_RS12050 NONE
JN178_RS12055 2686601 .. 2686631 + -14.2  -3.35197   CTAGACAATCACCGA       TGAAAAAGCCAGAC ATT GTCTGGCTTTTTTG       TTCCTGTCTGTAAAG 100 37
JN178_RS12095 2696193 .. 2696209 +  -9.4  -5.43487   CCAAAAACAAAAAAA              CCGCCT TTTAT AGGCGG              TTTTTTATATCATTT 100 73
         gap 2706475 .. 2706497 +  -9.9  -5.79595   TGAGTTAATCTAAAA           GGTGTAAGC AATAA GCTTGCACC           TTTTTTGTTTTCCGA 100 85
JN178_RS12130 2707514 .. 2707529 + -10.4  -5.42259   ATAGGAATAAAAAAA              CCTGCC AAAT GGCAGG               TTTTTTTGAAAATCA 100 58
JN178_RS12160 2714330 .. 2714361 + -13.2   -3.2281   TAACAGCTGCAACAG      GGCAAGCGAGTTGAT TTC ATCA-TTCGCTTGCC      TTCACTTGATAATTT 100 38
         pyk 2716114 .. 2716137 + -16.8  -5.96894   GCTAAAAGAATAAAA          GCGAAGCCTG ACGT CAGGCTTCGC           TTTTTTTATTTAGAT 100 70
JN178_RS12180 NONE
JN178_RS12190 2720650 .. 2720663 +  -2.3  -2.63723   CACCCACTTCCAAGA               GGGCT CTTG AACCC                ATTGCTTAATCCGCA  40 3
JN178_RS12195 2723223 .. 2723233 +  -3.2  -3.58536   ATACATTCATGAGGC                 TCTG GCG CGGA                 TTTAACGGTAACTTT  51 356
JN178_RS12230 NONE
JN178_RS12235 2735807 .. 2735837 + -13.5  -3.61764   ATATTAATTACCGGA      TAGAAA-GGAGGGC CTAT GCCCTCCTTTTCTA       TTTAAGCATTAATCG 100 69
JN178_RS12250 2738522 .. 2738540 + -11.8  -5.95166   TACACTTTAGAAAAA             CGACTTCA CTA TGAAGTCG             TTTTTTTTAGTTCAA 100 154
JN178_RS12255 NONE
JN178_RS12265 2742962 .. 2742992 +   -17   -5.1675   ATGGCATCAAGTAAA       GCCTTATTGCCCAT TGA GTGGGCAGTAAGGC       TTTTTTAATAGGTAA 100 50
JN178_RS12270 NONE
JN178_RS12275 NONE
JN178_RS12280 2747010 .. 2747027 +  -3.5  -2.85351   GAATAAACAAGGAAT             TTGTAAT GCGC ATTGCAA              TGTGGTCTGGGCCCA  44 35
JN178_RS12285 NONE
JN178_RS12290 NONE
JN178_RS12295 2749355 .. 2749365 +  -5.4  -3.65581   ACGTGCAGTGGCCGA                 GACA TGT TGTC                 TTGTTGGACGTTCAT  59 230
JN178_RS12305 NONE
JN178_RS12310 NONE
JN178_RS12315 NONE
JN178_RS12320 2753158 .. 2753172 +  -4.9  -4.56775   ACATCTGGCAAAAAA               GCGCC AACTA GGTGC               TTTTTAAACCCAACT  70 84
JN178_RS12370 NONE
JN178_RS12375 2763397 .. 2763421 +  -2.7  -4.20696   ATAGTTATCGGCTCA          GCGACAACTGA GAA TGAGTAGCCGC          TTTTACACTTACTGG  58 209
JN178_RS12380 2767058 .. 2767073 +    -4  -2.86838   GAATGTCCGCTTTGT              CTTTTG CGGA CAAAGG               TAATCTTTCGCTCTA  45 53
        metG 2773027 .. 2773052 + -11.9  -5.42131   GCAAAAAATGCAAAA         GCCATGACAGG GAAA CCTATCATGGC          TTTTTTGTATACTTC 100 57
        gloB 2774793 .. 2774809 +  -5.1  -2.77043   GCAAAAGCAAGCTAG              TTGCCGT AAT ATGGCAG              GTTTGCAGTGCTCCA  50 42
JN178_RS12420 NONE
JN178_RS12425 2777634 .. 2777644 +  -3.2  -4.20148   TTTAACACGCCGCCA                 GTGT CAC GCAC                 TTGTTTTAGAATACT  60 86
JN178_RS12435 2779222 .. 2779238 +  -9.4  -3.89346   GTATAAAATAAGAAA              GCCCAC AATAA GTGGGC              TTTCTCGACTCAAAA  81 65
JN178_RS12445 2781346 .. 2781365 + -12.2    -4.946   ATACGTAGTATACAA            GCCGTATC AATG GATACGGC             TTTTTCGTCTTTAGT 100 51
        lpxH NONE
JN178_RS12455 NONE
JN178_RS12460 2786022 .. 2786041 + -12.2  -3.76125   CAACAGTAAGACCAA            GGGGCAAT ACCA ATTGCCCC             TTTCCCTTGGAGTAA  90 79
JN178_RS12465 2786877 .. 2786896 +    -5  -5.69262   AAACCTAAATATTAA            GCAGCA TTTAATCT TGCTGC             TTTTTATTTTTGTAG  93 105
JN178_RS12470 NONE
JN178_RS12475 2789459 .. 2789483 + -14.4   -4.0825   ATAGTAGGAAACCAA          GAAAGCCCCT TTTGT AGGGGCTTTC          TTATTTGGTTAAGGC 100 50
JN178_RS12485 2791589 .. 2791602 +  -2.3  -4.35116   TACAAGGAGAGCATT               GTGCG TAAA CTCAC                TTTTCCTCTAGCATG  57 18
JN178_RS12490 2794096 .. 2794144 +    -4  -3.10522   ATTCGTTTCACGTTG AGTTGCATAAAGTGAC-CATGTA ATTT TAAAGGAGACACTTTATGCAACG TATATTAACTCGAAT  48 52
JN178_RS12495 2795247 .. 2795259 +  -2.7  -3.57144   GAGCCTGCGCAGCAA                TTGTT AGC GACAA                TTTCGCAATAAGGAA  49 2
JN178_RS12500 NONE
JN178_RS12505 2797455 .. 2797469 +  -5.8  -2.63631   GCAGTATCGCTTCGC               CATTTT TAA AAAATG               TCATATCAACCTTCA  50 164
JN178_RS12515 NONE
JN178_RS12520 NONE
JN178_RS12525 2800111 .. 2800122 +  -5.8  -3.30124   GCTAGTTGCTACACA                GGGA ATAT TCCC                 TTCTCGAAGCTAACG  58 1
JN178_RS12530 2801250 .. 2801260 +  -3.2  -3.78597   AGGTGTTTTCCCACT                 GTGG TTT TCAC                 TTTGCCTTCATCAAT  53 164
JN178_RS12540 2803191 .. 2803219 +  -8.1  -2.80732   AAAAGCAAATATGAG        CCATTGCCTACTC AAT GGGAAGGCAATGC        ATTTCAACTTCGTCT  66 27
JN178_RS12560 2809656 .. 2809668 +  -7.7  -4.29391   TAACGGCAGTTCTGT                GATGC TAT GCATC                TTTGCTTTTATCGTT  79 135
JN178_RS12565 2810482 .. 2810498 +  -9.4  -5.31519   TTAAACATAAAAAAA              GCCGCT CTCGA AGCGGC              TTTTTGTTTCAATCT 100 107
JN178_RS12625 2826083 .. 2826108 + -13.3  -4.57516   AACTAATACAAAAAA         GCGCGAAATGC AGAA GCATTGCGCGC          TTTTAGTTTCAATGT 100 52
JN178_RS12635 2828929 .. 2828942 +  -5.2  -2.52516   TCAAACGGTGTCACA               GCGC GTTATA GCGC                ATTGGTAGTGAAAAG  49 4
        mnmC 2831460 .. 2831482 +  -4.2  -3.30597   TTAATTTCATTGCCA          GCTGAGACG CATAAT CGT-TCAGC           CTTTTATGGGTTTGT  50 456
JN178_RS12660 NONE
JN178_RS12665 NONE
JN178_RS12670 2838140 .. 2838172 + -15.7  -5.27335   TGTAATGTTATCCAC      TGGCTTACGCTGC CTTAACA GCAGCGTAAGCCG      TTTTTGTTTAACAGC 100 36
JN178_RS12695 2842640 .. 2842657 +  -2.7  -3.86346   GATCTAGCGTTACCT             TGGATGCA TGA TGCG-CCA             TTTATCGAGCAGTGG  51 62
JN178_RS12700 NONE
JN178_RS12705 2844215 .. 2844241 +   -14  -3.32765   ACAATCAATGAATAA         CACTTTAAACAT ATC ATGTTTAAAGTG         TTAATATATGGAGTT 100 30
JN178_RS12710 NONE
JN178_RS12715 NONE
JN178_RS12720 2849109 .. 2849133 +  -6.3  -3.14344   ACCAAGTCCATACGG          CCGTCTTGGTC GTA GTCAAAGGCGG          TTACTCCAACACCTG  57 501
JN178_RS12755 2863980 .. 2864003 +  -6.7  -4.00532   AATCATTTAACTTAT          TGGGCCAGA TTCAAT TCTGGCCAA           TTTCATATTTCGGAG  69 39
JN178_RS12760 2865800 .. 2865817 + -14.1  -5.07275   TTTGTTTGATATTAA             CGCGGCC ACAG GGCCGCG              TTTTTGTATCTATCA 100 51
JN178_RS12775 2871635 .. 2871654 +  -7.9  -5.26875   GAGTGCACCAAAAAA            CAGACGT ATCTAG ACGTCTG             TTTTTTGGTTGGGCA 100 390
JN178_RS12810 2880758 .. 2880788 + -12.1  -4.77122   TAATCTCTTATAGAG      CGAAAAA-GCCTGA TGAA TCAGGCTTTTTTCG       TTGTTTTTTATCTAC 100 68
JN178_RS12840 2890593 .. 2890607 +  -3.5  -3.27215   ACCTTAGCTTGCGAT               GGGTA TTGGT TGCCC               TTCGTGTGCCGCTTT  48 65
JN178_RS12850 2893736 .. 2893750 +  -8.6  -3.14587   CTGGACTGGCACAAT               GGCAAT TTT ATTGCC               TGTGGTTTTCTCGCC  67 519
JN178_RS12870 NONE
JN178_RS12875 2899919 .. 2899934 +  -7.6  -5.68438   GAATAAATAAAAAAA              GCAAAC CTCT GTTTGC               TTTTTTATTTGATAA 100 31
        nhaB NONE
        dsbB NONE
JN178_RS12910 2907673 .. 2907687 +  -7.8  -4.86939   ACCGACATGCCCGCT               GCATGC ATA GCGTGC               TTTTTCCCTTTGTTC  86 149
JN178_RS12970 2918568 .. 2918596 + -14.7  -3.18839   AATACTTAATGAGTA        GAGACCTTGCC TTTGCTT GGCAAGGTCTC        TCTATCTTTCGAAAT 100 43
JN178_RS13000 NONE
JN178_RS13005 NONE
JN178_RS13010 2924717 .. 2924736 +  -6.4  -5.48213   GATACTCACGATAAA            TGGCGC TTATTTTT GCGCCA             TTTTTCTTTTGCATA  89 39
JN178_RS13015 2925702 .. 2925718 +  -2.3  -4.09746   TGATCGCGATCTTCT              TCTGA AAGATGG TCAGA              CTTTTTTGTTTTCTG  55 155
        hisG NONE
        hisD NONE
        hisC 2929515 .. 2929532 +  -2.6  -3.58703   AAATAATGAGGACGC             GGCATG AGTCAG CAAGCC              ATTTTATTTATAGAC  49 19
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
JN178_RS13060 2933415 .. 2933425 +  -3.2  -3.40522   AAGCATATACGATGG                 CCTT TAC AGGG                 TTGTGCTAACAACGT  49 78
JN178_RS13065 2934675 .. 2934695 +  -7.6  -4.63527   CCATTGAAGGAACAG            CGTGTTGC CCTTT GCAATACG            TTTTTGCAGTGGTCA  83 34
        lepB 2938647 .. 2938666 + -10.8  -2.99458   CTTTTTCGTTGCATT            GGAGTAAC CTTC GTTACTCC             TGCTATTTTCTACTC  79 19
JN178_RS13080 2941478 .. 2941495 + -12.7  -4.49756   TCATTTAAAATAAAA             CGCCCAC TTCC GTGGGCG              TTTTCATATTTCACA 100 52
JN178_RS13110 2947606 .. 2947622 +  -5.8  -5.60993   TCGCAACTAACTAAA              GCTCAG CCAGT CTGGGC              TTTTTTTATAGGCAA  89 50
JN178_RS13180 2963224 .. 2963244 +  -7.6  -5.94597   TACGAAAGACTAAAA            CTGGCAGT TCTAC ACTGTCAG            TTTTTTTTACTCTTC 100 47
JN178_RS13185 2964255 .. 2964270 + -10.4  -5.64274   CACGTATCTTTAAAA              GGTGGC TTTA GCCACC               TTTTTTTATACATAA 100 63
        prsT 2967175 .. 2967194 +  -9.3  -3.16068   CAACATAGTTAGCAA            CACGCAC AGTTAC GTGCGTG             CTTTTCCATTCCACC  74 59
JN178_RS13215 2974481 .. 2974510 + -16.7  -3.54129   CTGAATTTTAGAAAA       CAAAAAACGCACT TAAT AGTGCGTTTTTTG        TTTGCCGAGGCTATC 100 47
JN178_RS13235 NONE
JN178_RS13240 NONE
JN178_RS13245 NONE
JN178_RS13250 NONE
JN178_RS13255 2981313 .. 2981331 +  -8.8  -4.94972   ATTCTACACAAAAAA             CGGCGC TGAAAAT GCGCCG             TTTTTGATTGTGCTC  91 52
JN178_RS13270 NONE
JN178_RS13275 NONE
         dxs 2986525 .. 2986540 + -11.8  -5.48063   AAGCATATACAAAAA              GCCCGC AAAC GCGGGC               TTTTTTATATTAGGT 100 65
        ettA 2997343 .. 2997360 +  -8.4  -5.46657   CATGTGTTGCCAAAA             GCCCTC ATTATC GAGGGC              TTTTTTATTGCCATG 100 63
JN178_RS13340 2997996 .. 2998025 +  -2.7  -3.59979   TAGCAGCTTCAATTA       TACGCTCGGTTCC ATTT GGTACAGGCCGTA        TTTCACCTGCCAAAC  50 186
JN178_RS13350 3002051 .. 3002068 +  -8.4  -5.30155   CTCACCGCAACAAAA             GAGCGC CATTTA GCGCTC              TTTTTTCGTTAGTAC 100 57
JN178_RS13360 3003909 .. 3003920 +  -4.4  -3.06501   TTAAGTAAATGAGAT                TTGC TGAG GCAA                 TTAGGTAGGCCTGTG  50 33
        nadB 3015030 .. 3015047 +  -9.9  -5.67063   ATCTAAGGTAAAAAA             GGTGAGT TAAT ACTCACC              TTTTTTTGTAATCGC 100 44
JN178_RS13435 3018098 .. 3018109 +    -3  -3.12351   GGGCCCAACTAGGAT                TTGT TATG ACAA                 TTACCTCTGACAGCG  44 97
JN178_RS13440 3018607 .. 3018632 + -13.3  -4.20981   CGCACAATAAGAAAA         GGGGAGCACAC TACT GTCTGCTCCCC          TTTGTACTTTCTTAC 100 44
JN178_RS13455 3021034 .. 3021045 +    -3  -2.73529   TGTAACCCCCTCATT                TTTG GCTA CAAA                 TGCCTTTCTCTGCCA  41 400
JN178_RS13465 NONE
JN178_RS13470 NONE
JN178_RS13475 NONE
JN178_RS13480 3023565 .. 3023596 +  -2.3   -2.8739   AAATAATGCTCCGTC      TGACGCCTGACTAG ACCCA CTAA-CAGGTGTCG      CTTTAAGTTGGTATG  41 142
        rpsT 3038649 .. 3038662 +  -9.5  -5.76633   ATTAGTAGTAAAAAA               GCGCC TTAC GGCGC                TTTTTTTGTATCTGC 100 49
JN178_RS13565 3043361 .. 3043381 + -12.7  -3.53444   GTTTGAAATAAAAAA            GGCTGATAT CAA ATATCAGCC            TTTGCGAAACAATAG  95 30
JN178_RS13575 NONE
JN178_RS13580 3048410 .. 3048426 +  -6.5  -3.32024   CGAGTACGGCGAGCC              GCGATTG ACG CACTCGC              TATTAGTCTTTGTAG  61 46
JN178_RS13590 3050097 .. 3050120 + -13.2  -4.87291   GTGAGACACAAAAAA          GCCCCTTTCA TGAA TGGAAGGGGC           TTTTTAGTTAGCGTA 100 98
        folD 3062541 .. 3062561 + -11.2  -3.95986   AGTTCATTAGCTATT            GGCACCAT TGCAT ATGGTGCC            TTTAATTCCCTTAGA  86 39
JN178_RS13660 3063172 .. 3063191 + -13.6  -2.71246   CGGAAATAAAAAAGC            GGCTCACG ATAG CGTGAGCC             TAAATTTGATTGGAT  91 32
        tsaA 3064074 .. 3064090 +  -5.1  -3.86822   TGACGCAGATAAATC              CGCTTTA AGC TAACGCG              TTTGTGGCGAAATTG  60 18
JN178_RS13670 NONE
JN178_RS13675 NONE
JN178_RS13680 3067859 .. 3067881 + -13.4  -2.78596   GAATATGCACATCAA           CCAGTGCGGC AAT GTCGCGCTGG           TATCCTCCACCAATA  85 86
        xseA NONE
JN178_RS13745 3083128 .. 3083152 +  -2.9  -4.59424   AAGCTTTCTTTGGGC          TTAACGTCATT TCT AATGGTGTAAA          TTTTAGTTTCGCTTT  65 77
        suhB 3105776 .. 3105796 +  -8.3  -5.77988   TGCTACGAATCGAAA            GGCGCTA TCAAATT TAGCGCC            TTTTTTTGTATGTAT 100 82
JN178_RS13870 3108186 .. 3108214 + -13.3  -4.59773   TCTTATCCGTATATA        AAAAAACCGCATC ACA GATGCGGTTTTTG        TTTTTACGAATCAAA 100 56
JN178_RS13905 NONE
JN178_RS13910 3115733 .. 3115749 +  -9.4  -4.86385   GTAAGTAGTACCAAA              GGGAGC TCACC GCTCCC              TTTCTTTTTGAACAT  91 33
JN178_RS13915 NONE
JN178_RS13920 NONE
JN178_RS13925 NONE
JN178_RS13930 NONE
JN178_RS13935 NONE
JN178_RS13940 NONE
JN178_RS13945 3121151 .. 3121182 +  -8.9  -5.05228   TACAATACGAGTTTA      CAAAAGCGGCACTG ACAAG TAGTGC-GCTTTTG      TTTTTATCATTTGGT  91 61
JN178_RS13950 NONE
JN178_RS13955 NONE
JN178_RS13960 3126269 .. 3126303 +    -3  -3.53563   CCTCATTCTCAAAGT    TGCCG-TATG-CTTTC ATCAA GTAAGCCATAGCGGCA    TTTCGAGAACGGTGT  48 425
JN178_RS13980 3131704 .. 3131721 + -12.7  -5.18355   CCCAACCTTTCCAAT             GGGCACC TTCG GGTGCCC              TTTTTCGTTTTTAAC 100 74
JN178_RS13985 NONE
JN178_RS13990 3135254 .. 3135269 + -10.4  -5.37043   TATCTTTTCGCAAAA              GGCACC ACTC GGTGCC               TTTTTTGTGTCAGAT 100 81
JN178_RS13995 3136442 .. 3136474 +    -2  -3.93401   TTGATGTATAGACGA     TGGTCGGGG-TGGTT ATAT AACTGTCCTCGGCTA      TTATTAATTTATCAG  52 92
JN178_RS14000 3137438 .. 3137475 + -11.4  -3.23393   TGATAAACGACAGGT   GGTACACTGCTGCAAT AATAGC ATTGGCGCAGTGTACC    TATTCTAGACTACAC  84 77
JN178_RS14030 3143491 .. 3143505 +  -7.1  -2.94337   AAATACCTTGTTAAT               CACGC CAACC GCGTG               TCCTGTTTTGACATC  59 179
JN178_RS14040 NONE
JN178_RS14045 3145900 .. 3145928 + -17.7   -3.4382   CCAAATAATACCTAT        TAAAAAACACGGC AAT GCCGTGTTTTTTA        TTGCTCTTAATTCTT 100 53
JN178_RS14065 3152027 .. 3152048 +  -9.5  -3.65425   GAGGAATAAAAAAAA           GGCTATTCT CTAA GGAATAGCC            TTTACAATATGTGGC  78 6
JN178_RS14080 NONE
JN178_RS14085 3156482 .. 3156494 +  -3.3   -2.9732   AGACAATTGCACAAC                GCGCT TAT AGCAC                TGGTTTAGGTTGAGA  45 5
JN178_RS14090 3159262 .. 3159282 +   -14  -3.68738   CGAAGTATATGTCTA            GGGAGCCC AAATA GGGCTCCC            TTGCTTTATTAGCCC 100 50
JN178_RS14175 3180009 .. 3180020 +  -5.8   -3.6149   GATATCGTTATTATT                CCAG AAGC CTGG                 TTCTAGTTGTTAAGT  62 8
JN178_RS14180 NONE
JN178_RS14185 NONE
JN178_RS14190 3184351 .. 3184379 +   -14  -5.72254   CGGTCTAATAAAAAA       GCGCCTG-TACGT AAAA ACGTATCAGGCGC        TTTTTTGTTGTTTGC 100 92
JN178_RS14205 3187726 .. 3187741 +  -5.4  -3.49419   CCTGTGTGTTCTATT              GCTAAC GCCA GTTGGC               CTTTTTCTAGCGCAC  57 348
        glnE 3191785 .. 3191797 +  -7.7  -2.60763   CTCTTCTTCTACAGG                GTCAG TCG CTGAC                ATTCTAAAGTCTCGG  59 470
JN178_RS14240 3196791 .. 3196810 + -12.8  -5.81412   CGTTAGTAACCCAAA            GCCCTGGC AATA GCCGGGGC             TTTTTTTTACCTGAA 100 45
JN178_RS14245 NONE
JN178_RS14250 NONE
JN178_RS14255 3200423 .. 3200453 +  -7.6  -3.48924   TAAATTCTTGCTATC       GCGTGGCGCT TTTATGAACTT AGCGCTACGC       TTATGTCACAAATGG  68 38
JN178_RS14260 3203613 .. 3203633 + -16.9  -4.91852   CTACTAACCTTACAG            TGCGCCGTC CTT GACGGCGCA            TTTCTTTTTCCTAGC 100 34
JN178_RS14275 3207303 .. 3207328 +  -7.5  -4.08692   ATGGGCATTAAAAAA         GCCCAGATAGT TTAC ACCTTCTGGGC          TTTTGCAAAACGTTC  75 292
JN178_RS14320 3217075 .. 3217133 +  -2.4  -2.78715   GCTTTAATTGAAATA GCGCGCTAAGCCATAGCAGGCAAA-ACC GAAGA GGCCTTTGCCATCT-TAGCCTAGCGTGC TGTCATAACACCCTT  41 40
        betB NONE
        betA 3221409 .. 3221431 +  -2.7  -3.54307   ACCCTGTGCAGTGTA           TTATCGTGC GATTA GCAAGGTAA           TTTGGGCACAATGTT  47 107
JN178_RS14340 3222748 .. 3222771 + -13.2   -3.4582   TTCCTTTGCATACAT          CATGGCTTGC GAAA GCAAGCCGTG           TGTTTGCTCGCGTGC 100 52
JN178_RS14345 3223549 .. 3223598 +  -7.4   -3.9534   CTATACATCTCGTCT GGCTACACGTTTAGCGTTACCGCTT TCC AAGCGATG-CGTTA--CGTGTAGCC TTTATGGCTCTCCCT  72 42
JN178_RS14350 3224411 .. 3224433 + -13.5  -4.82901   AGCAAAGCACAGAAA           TGCGCGCTT TTCTT AAGCGCGCA           TTTTTCTCAACGACA 100 10
JN178_RS14365 3226366 .. 3226387 +    -8  -3.53012   GAACGATACACTTGG           GCGTGCTT ATTAGA AGGCACGC            TTTCACACCAGGGGC  68 50
JN178_RS14375 3228645 .. 3228697 + -14.4   -2.5294   CAAAGCAGTGAATTG AGTAAAGTGTCA-GGCCTTTCGCTT TCTT AAGCGAAAGGCCATGAAACTGTACA ATGTTGTAAGCAATA  95 30
JN178_RS14395 3233715 .. 3233728 +  -5.9  -3.69354   GCACATCAGGATAAC               GTCGC GCTA GCGGC                TTTCCCATTCTAAGC  59 430
JN178_RS14405 3234944 .. 3234954 +  -5.4  -2.66634   AAAAATATCTGTGGC                 GCAA TAT TTGC                 TGCTGTAATGACATG  51 74
JN178_RS14410 NONE
JN178_RS14415 3237849 .. 3237896 +  -6.6  -2.83164   AAATTACTTGCAAAA TATAATTACAGATGTAATCTTA ATCT TAAGACTACAGTTGTAATCATA TATAGTGGTGAGTAA  57 86
JN178_RS14420 NONE
JN178_RS14425 3239546 .. 3239575 + -14.5  -5.12707   TGGTAGAAGAGAAAA       TACTAAAAGGAGC TGGT GCTCCTTTTAGTG        TTTTTTCGAATTTAC 100 118
JN178_RS14450 3244273 .. 3244297 +  -2.8    -3.794   TATAGTGCAGCACAA          GCGCGC CCACAATAGCACC GCGCGC          TTTAATCGCTTGAGG  51 118
JN178_RS14455 3245201 .. 3245218 +  -2.8   -3.8901   CGCCCCATTGGTCAT             TTAAGT CATTCC ACTTAA              TTTGATAGTTTGCCC  54 379
JN178_RS14475 3252647 .. 3252665 +  -4.6  -4.09243   TCATCGTGGAGACCG             TCTACAAA TGA TTTGTCGA             TTTTAAGCACGTCTA  61 236
JN178_RS14490 NONE
JN178_RS14495 NONE
JN178_RS14500 3260385 .. 3260399 +  -4.2  -4.15788   GCACAAAAAAAGTAT               GTACGC TTT GCATAC               TTTATTGAACGGATT  61 68
JN178_RS14505 3261822 .. 3261833 +  -2.2  -4.77567   TTAGTGACCACACTG                GTAG GAGA CTGC                 TTTTCTTCTAGCAGT  66 521
JN178_RS14530 3265993 .. 3266006 +  -4.5  -5.00616   CCGAATTTCGAAATC               GGCGA GAAC TCGTC                TTTTTTAAACAGCAC  73 55
JN178_RS14535 NONE
JN178_RS14540 NONE
JN178_RS14545 NONE
JN178_RS14550 NONE
JN178_RS14555 NONE
JN178_RS14560 3271119 .. 3271131 +  -7.7  -3.09878   TCCTGAGCTTTGTGA                CAACG GAA CGTTG                TGTTCAATGGCTAAG  62 415
JN178_RS14570 3271904 .. 3271939 + -12.9  -3.95986   AACATCGATAGTAAC    G-CATTGCCTGTAATT ACAAG AATTACAGGCAATGTC    TTTCGTTCAGTTAGC 100 40
JN178_RS14580 NONE
JN178_RS14585 3274403 .. 3274434 +  -8.7  -2.66272   TACCTGTTTCTCATT      GCAACCATCACCC TATTTT GGGTGATGGTGCC       TGCGTTTGCCTACCA  67 67
JN178_RS14590 3277762 .. 3277774 +  -3.3  -3.24848   ATGCCCTACTGAGCG                CCAGG TGA CATGG                GTTTTATCACCTCTT  46 172
JN178_RS14600 3280396 .. 3280406 +  -6.8  -2.66733   AATTATCACTTTAAA                 GGCT AAA AGCC                 TGATATCCATTAACA  56 342
JN178_RS14605 NONE
JN178_RS14610 NONE
JN178_RS14615 NONE
JN178_RS14645 NONE
JN178_RS14650 3292836 .. 3292858 +  -3.3  -3.18849   AATGAGAAACGACTC           GCAGCAAGC TGGAT GCTCCCTGC           TATTCATACTCTAAC  46 94
JN178_RS14655 3294163 .. 3294195 +  -3.3  -3.01791   AAAATAGGAAACGGA      AAGGGCTGCAGCG AACAAGA TGTTGCAGCCCGC      TGTTGACGCACCACT  45 54
JN178_RS14660 NONE
JN178_RS14665 3296960 .. 3296984 + -15.1  -3.93256   CACACACCCACAACA          TTGGCCCTTGC CAC GCAAGGGCTAA          TTGTTTAGCAGTATG 100 461
JN178_RS14680 NONE
JN178_RS14685 3303886 .. 3303902 +  -9.5   -3.1733   TCTGTTGAAGACGGC              GGTAAGT CAC ACTTACC              TACTTTTATAAGAGA  72 494
JN178_RS14695 NONE
JN178_RS14700 NONE
JN178_RS14705 NONE
JN178_RS14710 NONE
JN178_RS14715 NONE
JN178_RS14720 NONE
JN178_RS14725 3314856 .. 3314873 + -11.3  -4.92239   TAAGAAAACAAAAAA             GCGAACC AACT GGTTCGC              TTTTTCAATTTTTAC  93 46
JN178_RS14745 3321410 .. 3321430 + -15.5  -3.04196   TAACGGCACAAAAAA            GGCGCTAGT GTA ACTAGCGCC            TGTCTATGAATTTGC 100 38
JN178_RS14755 3324053 .. 3324066 +  -6.7  -3.60098   ACAATGCGTTTGAAA               TACCG GTAT CGGTA                TTTGAACTAAGCAGT  64 342
JN178_RS14790 NONE
JN178_RS14795 NONE
JN178_RS14800 NONE
JN178_RS14805 3337697 .. 3337726 + -12.3  -5.27938   TTCAAATAGTAAAAA       GGCAGCG-GTCTAA TAG TTAGATGCGCTGCC       TTTTTGTTTGGGCGT 100 43
        ssrS NONE
JN178_RS14850 NONE
JN178_RS14855 3348911 .. 3348932 + -11.6  -5.64304   TGTGATAATGTTAAA           GGGAGCTG TTGGAT CAGCTCCC            TTTTTTATTGTCTTC 100 47
JN178_RS14860 3350615 .. 3350625 +    -4  -3.49475   TTTGAGTTAAAAACA                 TCAA TGG TTGA                 TTCTGTACAGCTCAC  51 47
JN178_RS14865 3351356 .. 3351366 +  -3.2  -3.12717   TTGCTGAATGATATG                 GTCA GGT TGGC                 TATCTATTCGTCAGT  46 149
JN178_RS14870 3352556 .. 3352579 +   -14  -5.25735   TGACCTTTCCCCCAA          CGCAGCAAAA CTTC TTTTGCTGCG           TTTTTCATTTTTTAA 100 55
        rpiA 3353342 .. 3353386 +  -8.6  -3.40323   ACATATAAATAGCCT TTTTGCAGACACTGCGCGCA CACGC TGGGTGCAGTGTTAGCACAA TTACTACTTTTATCT  74 29
        serA 3354851 .. 3354866 + -10.4  -5.56264   GTTTTAAACAAAAAA              CGCTGC AAAT GCAGCG               TTTTTTATATTTAAC 100 55
JN178_RS14960 NONE
        nadC 3376525 .. 3376540 +  -3.9  -6.28401   TCAATTATATTTAAA              GGCCT TTTTGT GGGCC               TTTTTTTGTTTTTTG 100 67
JN178_RS14970 3377339 .. 3377357 + -13.2  -4.70659   AAATAAATGTAAAAA             GCCCAGTA TCA TACTGGGC             TTTTTCGCTCTCAAG 100 59
JN178_RS14975 3378598 .. 3378616 +  -9.6  -3.37935   ATTTTCCAAATGGGC             GACGTGGT ATA ACTACGTC             TTCCTCATTTTAAAT  75 14
JN178_RS14980 3379576 .. 3379586 +  -2.4  -4.07568   TGTTGTAGGCCATAA                 GGCC GTT GCCC                 TTTTAGCGAGAAAGA  54 33
        coaE 3380254 .. 3380293 +  -5.8  -2.79183   TGAAATAACTATATT  TGTCGTTTTCGTTGCAAAG TAG CCGTGCAACGAAAAAG-CA  TCTGATGAAGATAAA  54 57
        zapD 3381248 .. 3381264 +  -2.9  -3.96892   ACGTAAGTCCTCGTC              CACTGTT ATC AACGGAG              TTTCTAATGGAAGTT  53 55
        yacG 3381697 .. 3381709 +  -2.7  -2.76162   ACACCATCTGTGACT                TTTGA CGT TCAAG                CTTTGCCATAAGGTC  41 224
JN178_RS15005 3383371 .. 3383387 +  -2.2  -4.36914   AGCTAATCTCTCTTA              TGGCGA TTAGC TCGTCG              TTTTCTGCAGCACAA  59 77
JN178_RS15010 3384319 .. 3384337 + -14.6  -5.28942   ATTACCAATAAAAAA             CGGCCACT ATA AGTGGCCG             TTTTTGTTTAAGGTA 100 59
JN178_RS15120 NONE
JN178_RS15155 NONE
JN178_RS15160 3420743 .. 3420764 + -15.9  -2.90075   CCTTTATAGCGCTAT           GGTGAGGGC TAGC GCCCTCACC            TATCATTCAAGAGCG 100 55
JN178_RS15165 NONE
JN178_RS15170 3423374 .. 3423423 + -14.6  -3.57418   TTACAGGCCCCCCAC CGCCAGTTTGTTATTTAGCGCCA ACGGG TGACGCTAAATAACAAAA-GGCG TTGATTTAATCACTG 100 8
JN178_RS15200 3432113 .. 3432128 + -11.8  -4.42974   TTAAAAAACAAAAAA              CGCCGC AATT GCGGCG               TTTATTCTCTATGGC 100 41
JN178_RS15210 3434637 .. 3434647 +  -2.6   -2.8664   CACCCATGGCCCAAT                 TTAT AGG ATAA                 TGTGGTAATTCAATA  42 99
        gshB NONE
JN178_RS15220 NONE
        ruvX 3437113 .. 3437137 +  -4.2  -3.27476   AGACAATGTGCCCAA          GCTTGAACCG TCTTT CGTATCAAGC          TTAATCATTAGGCGT  48 433
JN178_RS15245 NONE
JN178_RS15250 NONE
JN178_RS15255 3441412 .. 3441422 +    -4  -3.50332   TTCCTTTTTATTAGG                 GTTT CTG AAAC                 TTCGTTGTATAGGTA  51 27
JN178_RS15260 3441911 .. 3441940 + -16.7  -3.33492   TTTAACGTCAGTACA       TGCAGATAAGACA TTAA TGTCTTATCTGCA        TTCTAAACTACCTGC 100 51
JN178_RS15275 3447119 .. 3447139 +  -7.6  -3.13867   CTGTATGCTTTCGTG            CCGCTTTA ATTTC TAGAGCGG            TATCTTGCTAGCTGA  65 51
JN178_RS15280 3447855 .. 3447884 + -10.1  -5.31059   TGGCTCCCTTTTTCA       GTTGCCAGACT ATCTCGTG GGTCTGGCAAC        TTTTTTAATTAGTGT 100 68
JN178_RS15285 3449965 .. 3450012 +   -12  -2.59881   AGCAATATAGTATTA CTCGTG-GCTACGCTGCAACGCT TCT AGCTTTGCAGCGTAGAGCCCGCG ATTGTCGGATGGATA  85 31
JN178_RS15330 3457577 .. 3457603 + -15.2  -4.38171   AACATAGCGAGCGTA         GGTGGCGAACCT AGT AAGTTCGCCACC         TTTTCCTATGCTGTG 100 152
         tal NONE
         pgi 3461421 .. 3461452 + -13.2  -5.61596   AAAAAACAAACTGAG      CGGTCATCTTTTAT ACAA ATGAAAGATGGCCG       TTTTTTTATAGCAAT 100 77
JN178_RS15350 3461923 .. 3461946 + -18.2  -5.09521   GAAAGATAACAAAAA          GGCCGCCTGA ACAT TCAGGCGGCC           TTTTTACTTTCTTAA 100 32
JN178_RS15380 3470178 .. 3470196 + -10.3  -4.89009   ACGCAACACTAAAAA             GGCTCGT ATCAA ACGAGCC             TTTTTGCTTCACTAT  93 79
JN178_RS15395 NONE
JN178_RS15400 3474037 .. 3474055 +    -6  -3.29511   CCTGGTTGGATTGGT             CAGTCG CTTGTTC CGACTG             TTCTAAACCAGTAGC  59 349
JN178_RS15410 NONE
JN178_RS15415 NONE
        arsH NONE
        arsB 3478603 .. 3478637 +  -5.6  -2.93652   ACTAGAGCGTGAATA     CCTTTGGCGGGGTAAA CCT TTTACACCGCCATCGC     ACTTTTTTGTGTTTC  53 36
        aceK 3481003 .. 3481013 +  -5.4  -2.81072   GGGTACCGCCGTGTA                 TCGT CAT ACGA                 CTTCTCTTAGGTGAA  52 96
JN178_RS15440 NONE
JN178_RS15445 3483146 .. 3483165 +  -4.4  -2.52896   CTTCAAGCATTAAGG            CTGTTTTT GCAT AAAAATAG             TGACTTCAGCCATGA  47 28
JN178_RS15460 NONE
JN178_RS15465 3486004 .. 3486027 +  -2.4  -2.93853   GCTTGCCAAATTAGA          TTGGTCTG CTAGCATT CAGCCCAA           ATTTCATTAGCAAAA  42 110
JN178_RS15470 3487272 .. 3487287 + -11.8  -4.93288   AGTAATACCAATAAA              GGGCGC CAAG GCGCCC               TTTTGTTTGACTGTT 100 36
        nspC 3488519 .. 3488552 + -15.5  -2.55069   GCGAAAAACTTCGAC     AAAAAGAAAACCCGC TAAA GCGGGTTTTCTTTTA      CTCTATTTCGACATT 100 57
JN178_RS15485 NONE
JN178_RS15490 3491916 .. 3491943 + -13.4  -4.42619   CCCATCCATGGGCGC        TCCGCCGCTGCA TCCA TGCAGCGGAGGG         TTTTCTACGGTATTC 100 94
JN178_RS15495 NONE
JN178_RS15500 3493333 .. 3493354 +  -5.8  -3.54022   AAAGAGTTTGCCACT           GCGCTTCT TGTTGC AGGGGCGC            TCTTTATGGAAATTT  60 39
JN178_RS15505 3494733 .. 3494744 +  -4.4  -3.57901   ACAACCAAAATTAAG                TGAC TTTT GTCA                 TGTCTTTTTGATGAC  55 40
JN178_RS15510 NONE
JN178_RS15515 3495760 .. 3495782 +  -4.3  -3.66288   AGTAAATCTGCTGTT          GTATTTCAGT AAGG AC-GAAATAC           TTGTGTTAAACAATG  55 14
JN178_RS15520 NONE
JN178_RS15525 3497759 .. 3497784 +  -6.2  -3.53563   TTTGGGTGTATCTTC         TTGTAGACGA ACATAA TCGTCTTCAA          TTTCCCACCCACTGT  60 233
JN178_RS15545 NONE
        prpB 3503034 .. 3503045 +  -2.2  -3.59063   GTGCCTCGCACCCCA                CTCG AAGC TGAG                 TATTTCGCTTTTTAT  48 201
        prpC 3504217 .. 3504246 +  -4.9   -2.5586   GAATTACGCCCAGTG       CCAGCTATTAGCG AACG CGCTTAAGGTTGG        GGTTTTATGAATATT  49 2
        acnD 3507185 .. 3507196 +  -4.4  -4.45765   GGGCATAGACCTCCC                CTCT CGAA AGAG                 TTTATTACTTTTGGG  66 366
        prpF 3508701 .. 3508717 +  -4.4  -5.59564   ACATTCGTATGAAAA              GCTCTT ATTTG AAGGGC              TTTTTTTAAATTTAT  84 77
JN178_RS15570 3510010 .. 3510037 + -11.3  -2.63109   CGGGATGAAACAAAA        GCGCAGGCCTA ACGAAC TAGCCCTGCGC         ATTGATGCTTTTCTA  78 14
        gltB NONE
JN178_RS15600 3522237 .. 3522258 + -13.1  -5.31456   GCACGTCAATGTTAA           GCCCAGTAA CCTG TTACTGGGC            TTTTTTATGCGTTAC 100 87
JN178_RS15615 3526870 .. 3526891 +  -7.3  -4.70266   CCCTTGGTTTAATCA           TAGCGTCAT TTTT ATGACGCCA            TTTTTGACTGATATT  81 148
JN178_RS15620 3527625 .. 3527637 +  -3.3  -3.15249   TACAATTAACGCACT                CGCGT AAA ACGCA                TTCCTAAAACCTATC  46 143
JN178_RS15625 NONE
JN178_RS15630 3529318 .. 3529328 +  -6.8  -3.90856   ATACCGTAATGGGCG                 GCGT GAT ACGC                 TTTCATTCAAGGCTT  69 32
JN178_RS15635 NONE
JN178_RS15640 3530723 .. 3530743 +  -8.4  -2.73006   TATGTCAGTCGACCG            CATGTAGA TTCTC TCTACATG            GTTGTGTGCATTAGT  66 19
JN178_RS15645 NONE
JN178_RS15650 NONE
JN178_RS15655 3533224 .. 3533234 +  -5.4  -2.64616   GCCAAAATTGCCGAG                 CGTT AAA AACG                 TACTATCGCTAGCCG  51 20
JN178_RS15660 3533717 .. 3533737 +  -6.8  -2.94422   AAGAAGACATAAAAA            AGCCCATC GTTAA GATGGGCC            GTATTTTTGAGCGTA  58 60
JN178_RS15670 3536683 .. 3536697 +    -5  -2.81133   CAAGCGTATTATGCT               TGCTAT GAA ATAGCG               TGTAATGGCTAAATA  50 13
JN178_RS15675 3537956 .. 3537971 +  -6.1  -3.07935   TTTTTATATCAAAAC              GCGCT AAAAGC AGCGC               TTGAATCAATCCAAT  57 80
JN178_RS15680 3539182 .. 3539200 + -12.4  -3.46081   GCATTAGTTAAAAAA             GGTGGGGC CTT GCTCCACC             TTAATTGATTGACTG  90 43
JN178_RS15695 3543089 .. 3543124 +  -2.6  -3.39288   ATCATTTGAACAAAA    GAATCATTTGCCGCATC AAT GA-GCGTTAGCTGATTC    TCTTCTTCCCACGTA  46 335
JN178_RS15720 3547838 .. 3547848 +  -3.2  -4.59773   GTGCTGTTGCTCCTG                 TCGA AAC TCGG                 TTTTTACCCGTCGCC  66 127
JN178_RS15785 NONE
JN178_RS15790 3562115 .. 3562141 +  -5.3  -3.54741   AACTGTAGTATTAAA         GATAACACT CAAGGAGCC AGTGTTATC         TTTAAACCGCTGCTG  59 66
JN178_RS15795 3562711 .. 3562721 +    -4  -5.30616   CCTCGTTATCGTCCG                 TGTT AAC AACA                 TTTTTCTTTGCATGA  79 334
JN178_RS15805 3564566 .. 3564599 + -15.5  -4.43911   AGCTAATACAAAAAA     CAGCGCTTCA-CGATG CGT TATCGATGAAGCGCTG     TTTTAATTGACCTTT 100 35
        glnA 3570269 .. 3570283 + -12.8  -5.77988   TAGAATCATACTAAA               GCCCGC ATT GCGGGC               TTTTTTTATGTCTAT 100 54
JN178_RS15830 NONE
        glnL NONE
        glnG 3573622 .. 3573637 +  -6.1  -5.66868   ACAAAAATTAAAAAA              GGCAC AATAGC GTGCC               TTTTTTTAGTTCATT  89 61
JN178_RS15855 NONE
        rraB NONE
JN178_RS15865 3578505 .. 3578541 +  -5.2  -3.50332   ATTTATACTGCGTCT   GCGCACAC-TTATGTAG ATGG CTACACGACGTGTGCAC    TTCCTTGTCTAAATG  56 196
JN178_RS15870 3579977 .. 3579998 +  -3.8  -4.06866   CTGCAAAAGTGGTAT           GAGTTTAT TACGTC ATAGACTC            TTCTTGTCTTTGTGC  59 8
JN178_RS15875 NONE
JN178_RS15880 3583535 .. 3583555 + -15.5  -4.56597   ACTGGAAATAAAAAA            GGGCTGTCT ATA AGACAGCCC            TTTTTGCAAGAAACA 100 30
        lptF NONE
        lptG 3590859 .. 3590889 +  -3.2  -4.87389   TGAGCTTTAATACCT       CGGTCTTCGCAAGG CGG TCTTGCAATGATTG       TTTATTTTTAAAATC  69 90
JN178_RS15920 NONE
JN178_RS15925 NONE
JN178_RS15930 3596436 .. 3596452 +  -9.4  -4.70319   AGCAGCACACCAAAA              GGCCAC AAAAC GTGGCC              TTTTACTTTTCATAA  90 53
JN178_RS15935 NONE
JN178_RS15940 NONE
JN178_RS15945 NONE
JN178_RS15950 3601016 .. 3601032 +    -3  -4.69053   AATTGGACACTTCAG             CGTTGGT AAAG ACCA-CG              TTTTGTTGAATAATA  65 17
JN178_RS15955 3601468 .. 3601483 +  -6.1  -5.75478   AAGTAGATACTAAAA              CCGAC CTTCGA GTCGG               TTTTTTTGTATCCTT 100 54
JN178_RS15960 NONE
JN178_RS15965 NONE
JN178_RS15970 3604549 .. 3604576 + -12.9  -3.29043   TTAAGAGGTTTCGTA        GGTACTGTGAA CCATCA TTCACAGTACC         TTGTCAACGGCAGTT  95 97
JN178_RS16015 3614553 .. 3614564 +  -4.4  -4.38927   AATACGAAGAGGCTA                GCAT GACC ATGC                 TTTGTTATATAACAA  66 25
JN178_RS16040 NONE
JN178_RS16045 3620605 .. 3620621 +  -4.4  -4.09685   CCTTTAGATAACGAT              GGTAAG CACGC CTTGCC              TTTTCGAGGCTCGGA  61 146
JN178_RS16085 3627602 .. 3627616 +    -5  -3.83644   TTCTGATGATGAGGA               CTTCGA GTG TTGAAG               TTAGTTTTTGCATAT  60 13
JN178_RS16090 3630621 .. 3630631 +  -5.4   -4.1466   AAATTATGAATGATT                 GTTG CTT CAAC                 TTTTAGGACTTCAAT  65 229
JN178_RS16100 3634001 .. 3634012 +  -7.2  -2.75963   CAAAGGTGGCTTTGC                GGCG AAAG CGCC                 ATTTGAAATCAGAGT  60 244
JN178_RS16105 NONE
JN178_RS16110 3637006 .. 3637018 +  -6.3  -3.10796   TGACAGGTGTGAGAA                TTCTC ATT GAGAA                TGTTGCGTAGTCAAG  57 97
JN178_RS16115 NONE
JN178_RS16120 3638967 .. 3638982 +  -6.8  -5.76633   AAGAAGATACTGAAA              CCGACT GTTA GGTCGG               TTTTTTTGTGTCTGA 100 209
JN178_RS16125 3640185 .. 3640198 +  -5.3  -3.93038   ATGGAGTACTAAATT               TGTTG AAAC CAACA                TTTACTATTAAAGTA  63 73
JN178_RS16130 NONE
JN178_RS16135 3642458 .. 3642473 +  -6.1  -5.95946   AAGTAGATACTTAAA              CCGAC CTTTGA GTCGG               TTTTTTTGTTCTTGG 100 204
JN178_RS16140 3643121 .. 3643147 +  -5.9  -3.18452   AATAGTGAGATCCAA        TGCACCTGCAGA ATAT TC-GCAGATGCA         TTGGATTAGCGTAGT  57 62
JN178_RS16155 NONE
JN178_RS16160 3650129 .. 3650159 +  -4.6   -3.1247   ATTTCAGCACACCTA       AAGCAGGCGAGT TATCGAT GCTCGCCTGCAC       TTCCCTCTCAGCGCT  50 41
JN178_RS16165 3650845 .. 3650861 + -12.3    -5.626   AGAATTAAGTAAAAA              CCGACAC ATG GTGTCGG              TTTTTTTATGCCCTA 100 49
JN178_RS16175 3651999 .. 3652014 +  -3.2  -3.48269   CACAGTCGTATTAAG              CGTATG CGTG CATTCG               TTCGTCTTTGCTGAG  49 502
JN178_RS16180 3656859 .. 3656892 +    -9   -3.0246   AGTCAAAGTATTCAC     TTGGC-TTTGCAGGG TTAGT CCATGCAAAAGCCAA     TGTATAGGTTTTATT  68 358
JN178_RS16190 3658819 .. 3658837 +  -4.4  -4.36914   TATTGGTGAAACCCA             AGGCTGCG AAG CACAGCCG             TTTTGTAACCAGGAA  66 520
JN178_RS16205 NONE
JN178_RS16210 NONE
JN178_RS16215 3665662 .. 3665699 +  -2.2  -3.52073   AAACATACAGTATTT   TGATTTATCC-TGTAAT CCTTT ATTACTCGGATAAGTCG   TTATGCTATTAACAA  46 87
JN178_RS16220 NONE
JN178_RS16225 3668901 .. 3668911 +  -2.4  -4.68593   TCTGGCAGTGGAGAA                 AGGG ATT CCCA                 TTTTTGCGTAGTAAA  64 305
JN178_RS16270 NONE
JN178_RS16275 NONE
JN178_RS16280 NONE
JN178_RS16285 3682410 .. 3682433 + -10.4  -3.49186   GCTATACTCGCGAAC          TGTCGCCCTTT TTA AAAGGGCG-CA          TCTATTTTATGGCTA  81 104
JN178_RS16300 NONE
JN178_RS16305 3686811 .. 3686840 + -16.7  -3.84772   TAATAATAAGAAATG       TAACAGCGTTAAG GGAA CTTAACGCTGTTA        TTCCTTTTCTTACTT 100 75
JN178_RS16315 NONE
        mmsB 3690294 .. 3690308 +   -10  -5.71712   TCTTAAAAACAAAAA               GCCAAC AAT GTTGGC               TTTTTTTGTGTGCGC 100 56
JN178_RS16330 3693025 .. 3693054 +  -2.8  -3.59979   TAAATAGAGGCAAAA       GCGCC-ATATCCT CTTAC AGGTAATTGGCGC       TTTACAGTGGAAAGC  49 38
JN178_RS16360 3699934 .. 3699953 +  -8.5  -5.83822   AAGTTGAAGTAAATA            CTGGCCC ATGGAA GGGCCGG             TTTTTTTTGACTATA 100 71
JN178_RS16365 3700694 .. 3700715 + -10.3  -3.85389   TTAATGAAGATGCAA           TATCACAGT AAAC ACTGTGATA            TTTGACTTATTAACA  83 15
JN178_RS16370 NONE
JN178_RS16375 3703473 .. 3703484 +  -5.8   -4.8143   CCTTTGCCGACGAAG                CGCT ACTT AGCG                 TTTTTGGCTTCTTGG  76 218
JN178_RS16385 3706860 .. 3706880 +  -5.5  -2.79188   CCGCGCACAACATGT            TGAAACC CGGCCTC GGTTTCA            TACTTCGATTGACTA  50 364
JN178_RS16400 3710716 .. 3710746 +  -6.1  -4.77173   TTTTAAGTTTTCAAA      GGTGCGAAGGGCCG ATTG TGGTC-TACGCACC       TTTATTTTCTACGAC  77 35
JN178_RS16410 NONE
JN178_RS16415 3715749 .. 3715762 +  -4.5  -2.61718   CTAACGAGGTTAGAA               TGTCC TTAA GGGCA                CATTTTTAAACATTG  47 48
JN178_RS16425 3719807 .. 3719824 + -12.7  -5.04249   CTAATTAGTCCTGAG             CACCGGC TTTT GCCGGTG              TTTGTTTTTTCAGCG 100 37
JN178_RS16430 NONE
JN178_RS16435 3721924 .. 3721951 + -16.4  -2.82776   TACGTGTTTCTATTT        TGGCCTGCAGCA CAAT TGCTGCAGGTCA         TCGATTTGTTTCTCC 100 48
JN178_RS16440 NONE
JN178_RS16445 NONE
JN178_RS16450 3724522 .. 3724533 +    -3  -2.73364   CTTTTAAGCCTACCT                TTTG CCAC CAAA                 TAATTAAGATGCGAC  41 113
JN178_RS16460 3728200 .. 3728217 +  -4.1  -2.50813   TTCGTTGTGTAGTAA             TGAGCAA TTGA TCGCTCA              CATTTATTCTCAAAT  44 179
JN178_RS16465 3728863 .. 3728878 + -11.8  -4.56702   TCATAAAGCAAAAAA              CCCGCC GTAA GGCGGG               TTTCTTTAATTAGGA 100 62
JN178_RS16495 3735211 .. 3735229 + -11.7  -5.56264   TTGATATAAACAAAA             GCCCGGA CTCGT TCCGGGC             TTTTTTATATTTACA 100 53
        trmA 3737904 .. 3737921 +  -8.4  -4.27316   AAAAAGTATACTAAA             GAGGCC AAAAGC GGCCTC              TTTTACATTAGAGAA  82 59
JN178_RS16515 NONE
JN178_RS16520 3741198 .. 3741219 +    -3  -3.07994   ACTTTACACATGTAA           GCAGAACT TATCTT GGTTTTGC            TTGCCTGAACTTCCG  44 94
JN178_RS16525 3742438 .. 3742462 + -14.3  -5.60689   ATACGCGTAAAAAAA          CCACACCAGCC TTT GGCTCGTGTGG          TTTTTTATTATCTAC 100 57
        sthA 3744026 .. 3744044 +  -8.8  -3.61654   AACAGGCACAAAAAA             GCCGGC ATCAAGC GCCGGC             TTTGAGCTAACTATA  74 39
JN178_RS16540 3745177 .. 3745190 +  -6.7  -2.60688   GTAACTTGCTTGCTC               GCGTT TTTC AACGC                CTTCTGCAATAGTTA  55 133
JN178_RS16550 3748367 .. 3748385 +  -4.6  -3.53012   TTCCGTCACCGAATT             CGTGAA GTCCACA TTCACG             TTTCAAGCCGAAGAA  53 57
JN178_RS16595 3757620 .. 3757633 +  -9.5   -5.0133   CTGGACGTAAAAAAA               GCGCC CTAA GGCGC                TTTTTTACAACAATG  91 17
JN178_RS16610 NONE
JN178_RS16615 NONE
JN178_RS16620 NONE
JN178_RS16625 3764908 .. 3764922 +  -4.3  -3.82218   AAACGCACTTTCTAT               GAGTT CGGGT AACTC               TTTGGTGATATAGCT  58 440
JN178_RS16635 NONE
JN178_RS16640 NONE
JN178_RS16645 3768577 .. 3768594 +  -8.4  -5.96894   TAAGGCACAAAAAAA             CCGGCT TAGTGT AGCCGG              TTTTTTTATTTAACT 100 49
JN178_RS16655 3770003 .. 3770023 + -16.9  -4.35116   CCAAAAAGAATACTG            CGCCGAGCT TAG AGCTCGGCG            TTTTGGTATAAAATA 100 54
JN178_RS16660 3771001 .. 3771019 + -14.6  -4.23707   AAATGCAATAAAAAA             GGCGACTC ACT GAGTCGCC             TTTCTTCACGTTTAT 100 56
        msrA 3774635 .. 3774652 +  -9.9  -5.93809   TCACAAATTAAAAAA             GGGTTGT ACTA ACAACCC              TTTTTTTTATCCGAC 100 80
JN178_RS16690 NONE
        fldB NONE
JN178_RS16700 3779167 .. 3779185 +  -2.4  -5.58454   GTCGCCATTTCACAT             AAACAGAC CTA GTTTGTTG             TTTTTTTACTGTGAA  79 14
JN178_RS16705 3779752 .. 3779767 + -11.8  -5.24989   TATAATCAATAAAAA              GCCGCC TTCG GGCGGC               TTTTTTCGTATATGG 100 49
JN178_RS16710 3781234 .. 3781261 +  -8.5  -5.76237   CAAATTACTATAAAA        CGCGGAGTT GATTAACGAA AACTCCGCG         TTTTTTGTTTGTATC 100 49
JN178_RS16755 3794321 .. 3794349 +  -6.9  -5.85178   CTAGATGATATATAA       GGGTATAACTGA AATTTA TC-GTTATACCC        TTTTTTTTGCGTATT 100 47
JN178_RS16760 3796385 .. 3796401 + -10.8  -5.64873   AGATCACACTAAAAA              GCGGGC ATGTA GCCCGC              TTTTTTATTATTCGA 100 54
JN178_RS16775 NONE
JN178_RS16780 NONE
JN178_RS16785 NONE
JN178_RS16790 3804751 .. 3804761 +  -5.4  -3.93262   TGAAATAATGCGTGT                 TGCA CTT TGCA                 TTTCGCTTTGTTCAG  63 76
JN178_RS16800 3806418 .. 3806428 +  -5.4  -3.76749   GTGAAGAGAAGGGTC                 TGGT GAC ACCA                 TTTCAGATTCTTTTT  61 92
JN178_RS16810 3808227 .. 3808248 + -14.5  -2.73483   ATATAAAACGATAAA           GGAGCCAAC ATTA GTTGGCTCC            TCGTTAAACTAGCAT  95 40
JN178_RS16830 3810885 .. 3810909 +  -3.6  -4.23528   TCATGGACAATGTCA          GTGTATTACG TGTTT CGTGATAAAC          TTTGCTTTTAGATTC  62 64
JN178_RS16835 3811354 .. 3811364 +  -5.4  -2.80028   GCCCATCGCTTTGAC                 CTCT TCG AGAG                 ATTTGCCATCTTGCT  50 215
         ppc 3826473 .. 3826497 +  -9.9   -5.5074   CTGTAAATCATAAAA          GCCCGCTTCTT AAC ACGTAGCGGGC          TTTTTTATTGCGTTA 100 52
JN178_RS16915 3828638 .. 3828650 +  -6.3  -4.37658   AGATTCGTAAGGTCG                GAACA GAC TGTTC                TTTTCTGAACAACTT  72 112
        argR 3830920 .. 3830948 + -13.1  -5.13473   GTCGAATAGCAAAAA        GCCGCGAGGCCTT GTG GAGGGTTCGCGGC        TTTTTTGCATCTAAT 100 48
JN178_RS16940 NONE
JN178_RS16945 3837400 .. 3837424 +  -2.8  -3.53012   TGTGAATATAACATT          GATTCGCG AGGCCTAAA CGCGTATC          TTTGCACCAAGAAAA  47 149
         udk NONE
JN178_RS16955 3839381 .. 3839412 +  -7.4  -5.36441   ATTACGCGCAAATTC      CTCGTGGAGTTGAT TTGT ATCAATTTCACGAC       TTTTTTCTGTAGCCC  91 103
JN178_RS16960 3840341 .. 3840359 + -11.7  -6.01187   GTAGTGTTATTCTTT             GCCGCAG CTAGT CTGCGGC             TTTTTTTGTTTAGTT 100 55
JN178_RS16970 3842522 .. 3842534 +  -2.6  -3.38314   TAACAAAGGCAATAA                TGCG TTCAT CGCG                TGTTTAAGGGTTACG  46 383
JN178_RS16995 3850563 .. 3850587 +  -4.3   -2.5409   CAACCTTTTGGACTT          GTGGTTCAATT GCA GATTTAGCCAC          TACCTTGCCCATTGT  46 114
        rimK NONE
JN178_RS17010 NONE
JN178_RS17015 NONE
JN178_RS17020 3854823 .. 3854840 +  -5.5   -4.7254   CCGCAAAACCAAATA             GAGTGAG TACT CACACTC              TTTTTAATGCAAGCT  74 20
JN178_RS17035 3858919 .. 3858934 + -11.8   -6.4275   GTATGGAATAAAAAA              CGGCGC ACAT GCGCCG               TTTTTTTTGTTTTTA 100 45
JN178_RS17130 3880595 .. 3880613 +  -4.4  -4.82128   GCTTAGATTGCAATT             GCGCACGC TCT GCTTTCGC             TTTTCTATTTCCTAG  73 376
JN178_RS17150 3885541 .. 3885551 +    -4  -3.87627   TGAGAAGAGTAATAA                 CTTA CCG TAAG                 TATTTTCTCTAGCAC  57 62
JN178_RS17390 3944020 .. 3944047 +  -7.8  -5.24531   TTTGTGAGTAGATAA        GCCGTCACCTG TTTTATT CAG-TGACGGC        TTTTTTATACACGCT 100 65
JN178_RS17400 3947024 .. 3947045 +  -4.4  -5.76237   AATGCACTAAAAAAA           CGCCAC GGTTATTGAA GTGGCG            TTTTTTGTTTGTGTA  90 87
JN178_RS17405 3947813 .. 3947825 +  -4.8  -3.29461   CTTCATAATCGTAAG                GGCT TCCAT AGCC                TTCTAAAAACAGTTC  54 198
        ubiD NONE
         fre 3951330 .. 3951344 +  -9.2  -5.50313   CCTTATTGTTAAAAG               CCGGCG TCC TGCCGG               TTTTTTCGTTTTGTA 100 48
JN178_RS17430 NONE
JN178_RS17435 3954063 .. 3954077 +  -8.5  -4.38503   TATACAACGTTAGAA               GGCGC TTTCT GCGCC               TTATTTCTTATTTAA  83 131
JN178_RS17440 3954746 .. 3954761 +  -6.2  -2.60392   CGCTACGGGAATGGG              GTTTGA TTAG TCAAAC               ATTGATTGCGAGATA  54 100
JN178_RS17445 3955952 .. 3955971 +    -5  -4.64992   GAAGGCTAGAATTCG            GCAATAAG GTCC CTCATTGC             TTTCTGTTTTTTCGA  73 366
JN178_RS17480 3964337 .. 3964348 +  -4.4  -3.26675   TGACTTGTGCTTAGG                GCTA TTAG TAGC                 GTTTTGCTTACCTTA  52 86
JN178_RS17485 3965251 .. 3965265 +  -2.9  -2.76418   GCTTGAATTATTTAA               TAAAC ATCTA GTTTA               GTCTTTGTGTAGAGG  42 10
JN178_RS17490 3967314 .. 3967348 +  -6.4  -4.60041   TTAATACGAAATCGT     GCAATGCAGAGGCG ATGTACC TGCCTCTGCAATAC     TTTTTAGAACTAGGT  77 59
JN178_RS17525 3973815 .. 3973829 +    -5   -3.9712   AAGCGTACTTAAATT               TGGTAT CAA ATACCG               TTTGTGATCGCGTAC  61 4
JN178_RS17530 NONE
JN178_RS17535 NONE
JN178_RS17540 3977922 .. 3977944 +   -12  -5.63504   ACACATTAATTTGAT           TGGGGCCTGT AAA AAAGGCCCCA           TTTTTTTGTGCCGTT 100 518
JN178_RS17590 NONE
JN178_RS17595 NONE
JN178_RS17600 NONE
JN178_RS17605 3992396 .. 3992418 +  -4.2  -3.52919   TCTTAAAGAGATACC           GTTTCACTTA TGT TAAGTTAGAC           TTATAGTTAAGTGAT  53 162
        gorA 3993860 .. 3993882 + -10.6  -3.16117   AACTATATGAAATGT           GGCTGCTTAA TGT TAAAGCAGCC           TCTTCACTTCCCTGT  78 62
JN178_RS17615 3995334 .. 3995344 +  -4.6  -3.95911   GATAAATTGGGTCGT                 CGTC TTG GGCG                 TTATTGCTTTGTGTT  59 96
JN178_RS17625 4000128 .. 4000153 + -12.7  -5.34555   TTGTAACAAATAATA         GCCAGTGGAAA GCAC TTTCTACTGGC          TTTTTTGTACTATCA 100 81
JN178_RS17630 4001376 .. 4001395 + -12.2  -4.08767   TTCACACACGAAAAA            GGGCCTTT ATTT AAAGGCCC             TTTTAAACAGCTAGG  95 52
JN178_RS17665 4009432 .. 4009443 +  -2.2  -2.92886   TTGTTACAAATCATA                GTTG CCGC CAGC                 GTTGTTATATCGCGT  42 71
JN178_RS17670 4010259 .. 4010270 +  -4.4  -2.68653   CAAAAATTATAGGCA                GCAA TACA TTGC                 GTTACTTCGTATTTT  47 119
JN178_RS17675 4011479 .. 4011492 +  -6.7  -3.22068   GGTGTACCATAGCCA               CCCTA CCAA TAGGG                TTAGTGCATATATTG  59 470
        rpmE 4015331 .. 4015359 + -14.8  -3.06831   TATCGGTATCGATAT        TAAAAAAGCGCC TATAT GGCGCTTTTTTA        TTGCCTAGACATTAA 100 53
JN178_RS17705 4017364 .. 4017402 + -23.6  -2.87211   AATTTACTCGTACTC   TAATAAAAACGGCGCTTA TCT TAAGCGCCGTTTTTATTA   TCTATGGCCAACAAT 100 42
        metF 4018868 .. 4018891 + -11.8  -3.97511   ACAGTTAACATTTCA          TAAGGTGCGC GCAG GTGCACCTTA           TTCTTATCTTAAGTC  90 80
JN178_RS17720 4019863 .. 4019878 + -10.4  -3.57971   TTACGCACAAAAAAA              GGGAGC TACT GCTCCC               TTTCCACATAGATCT  81 72
         pip NONE
         dtd 4022371 .. 4022396 +  -7.6  -2.60901   GACATTTCATTTTCA         GGTGTAACTC ACGATA GTGTTACACC          ATTGCTTCAACGTAT  62 19
JN178_RS17745 4023484 .. 4023498 +  -8.5   -5.4492   ACAGATAATAAAAAA               GCGCC GTTCA GGCGC               TTTTTTGTATCTCTA 100 101
JN178_RS17755 4026134 .. 4026151 +  -7.1  -2.91063   AATGAGTAGAATTAA             TAACAAC AATA GTTGTTA              GTTTGCGTTTACATA  61 32
JN178_RS17760 4027563 .. 4027577 + -11.4  -5.27477   TATAAAACGGAAAAA               GGCCCT ACA AGGGCC               TTTTTTAATTACGCT 100 48
        rsmD 4031692 .. 4031705 +  -2.3  -3.79519   AAATTCCATAAGCGG               GTGCG ATTT CACAC                TTTCATCGTCCGCTT  51 176
JN178_RS17795 4033293 .. 4033314 + -13.1  -4.91873   ATAAAATTGAAAAAA           GGCACAATC CTGC GATTGTGCC            TTTTTCATTACTGTG 100 56
        sfsA 4035458 .. 4035474 +  -2.1  -4.25256   GATTTTTTTCATTTC              GACGCCA TAT TTGCGCC              TTGTTTTAATGGGAG  57 51
        dksA 4036189 .. 4036211 +    -7  -5.34365   AGAGTCATTGTGAAA           GCCTCATC CCGAAAC GATGGGGC           TTTTTGTTATTATGC  91 58
      gluQRS NONE
        pcnB NONE
        folK NONE
        panB NONE
JN178_RS17835 4040790 .. 4040816 +    -3  -6.04324   TATGTATACAAAAAA        GCCCGC-AC AACAATTAGC GTAGCGGGC         TTTTTTATTTTTTGG 100 47
JN178_RS17845 4043862 .. 4043879 +  -2.6   -4.2361   AAATCGACCATAGCG             GCACTG CCATGC CAGCGC              TTTTGCACTTGTGTT  58 300
JN178_RS17865 4047455 .. 4047484 + -13.7  -2.60075   AGTTTTCCTGTTGAA       CGTATGC-GAGCTC GGC GAGCTCAGCATGCG       ATTCGTTAAGGGCAG  86 524
        pdsR NONE
        pdsS 4050956 .. 4050970 +  -7.2  -3.84825   AACCTTAAGCAATTA               TGAAAG GTC CTTTCA               TTTAATATAAATGAG  70 53
JN178_RS17885 NONE
JN178_RS17890 4054165 .. 4054191 +  -3.1   -3.2244   GAATGTAGGTTAGTC        TTAGG-GTGTGT CTGT ACATGCACCTAA         TTCACTATTCTAATA  48 111
JN178_RS17895 NONE
JN178_RS17900 4056271 .. 4056294 +  -3.2  -3.86015   GTGTCTAACTCACCT          TCAATAC-CGT CAA ACGCGAATTGA          TTTCTGACAAGGGTG  53 197
JN178_RS17925 4061999 .. 4062013 +  -2.8  -3.64487   GCGTATATCACTGCT               TTGCTG AAG TAGCAG               TTGTTGAACGTATCC  50 208
JN178_RS17985 4073036 .. 4073046 +  -6.8  -4.58395   AGACTGCATTAGATA                 CCCA ATG TGGG                 TTTTTCCCACCTGAA  77 456
JN178_RS17995 4074242 .. 4074261 + -12.2  -4.48713   TCTACCCAATACAAA            GCCAGTGA CTTT TCACTGGC             TTTCTTATTGCTACC 100 259
JN178_RS18075 4099692 .. 4099702 +  -5.4  -4.24745   CCTAATTTTGCGAGC                 GTAG CCT CTAC                 TTTGTCTTGATGCTG  67 65
JN178_RS18085 4102632 .. 4102662 + -11.9    -5.252   CTAGCGCTAAATAGA       GGGCGGCAAAATG GATGA CATTTCGCTGCCC       TTTTTTATAAACCTA 100 77
JN178_RS18090 4103567 .. 4103579 +  -6.2  -4.13945   TCAACCCCATATCTC                GCGC TAAGT GCGC                TTTTAAAATAAAGGT  68 215
JN178_RS18120 NONE
JN178_RS18125 4109599 .. 4109630 + -10.3  -2.76162   AAAGCATTCGCACTT      CGCGC-TGTGGAAA AGGAA TTTCCACATGTGCG      CTTTGCAGTGCGCTG  76 39
JN178_RS18140 4114073 .. 4114095 +   -10  -2.79983   ACTTAACATTTTTGT           GTAAAATCAC CCT GTGATTTTGC           TGATGTGTTCTATAC  74 145
JN178_RS18145 4114493 .. 4114510 + -12.7  -5.49569   GACGTTAAGTAAAAA             GCCGCTC AATT GAGCGGC              TTTTTTATGTTCGTG 100 49
        folM 4116129 .. 4116159 +  -7.4  -2.86743   AATTTATTTCATCAC       CCCTCACCTTGGTC ATA GGCCTTGGTGAGGC       TATAATCTCGGCTTT  60 78
JN178_RS18160 NONE
JN178_RS18165 4118174 .. 4118202 + -10.3  -5.71983   ACAGCTAGAGAAAAA        GCGGCACAAAACT AAA AGGTTTGTACCGC        TTTTTTTATGCTTGA 100 59
JN178_RS18180 4122676 .. 4122698 +  -4.8  -3.90291   AGCAGAACAAGGAGG           TGACTAATGG AAG CCTTCAGTCA           TTTACTTGAGCAGCT  61 19
JN178_RS18185 4124295 .. 4124318 +  -3.7  -4.35524   ACGTTAACGCTTAAA          ACCTGCGGG CTTTAA CCTGCGGGC           TTTTGCCTTTGCGCC  62 34
JN178_RS18195 4126996 .. 4127012 +  -3.5  -2.77344   TTGTGTACTGTTTGA              GAGGCCG ACG CGCCCCC              CTTCTTGGAAGCTGG  43 313
JN178_RS18205 4128725 .. 4128735 +  -4.6  -2.99661   TACTGAAGATATTGA                 GGCG CAT TGCC                 TACTTCTTCTAACTT  49 200
JN178_RS18240 4135583 .. 4135599 +  -7.9  -3.34398   CGTAACGGATGCCCT              CTCGGCC CAA GCCCGAG              TCTTTGACACCGCCA  65 124
        queG 4154044 .. 4154072 +  -6.1  -5.04325   GTATCGGTGGCGCGA       GAGCGTTCTAGC ACCGAA GTTAGA-CGCTC        TTTTTCTGCTTTAGA  83 508
         rsd NONE
JN178_RS18340 NONE
JN178_RS18345 NONE
JN178_RS18350 4158476 .. 4158488 +  -7.7  -2.89569   CCCATATTATAAATG                GCACA ATT TGTGC                TGGTTAATTTAACCA  64 41
JN178_RS18355 4159784 .. 4159808 + -13.6  -5.73978   GAGATAATAAGAAAA         GGCGCCG-CTC TTTC GAGACGGCGCC          TTTTTTGTTTCTGAT 100 50
JN178_RS18385 4165049 .. 4165071 +  -7.8  -3.87354   AACCCACCTCTTCTT           GGCGATATTT TTC AAATATCGAC           TTTACTGTACCTTTG  74 191
JN178_RS18425 4172821 .. 4172868 +  -8.6  -3.05715   GCAAAAACTTATCTG ATACTGTAGTCGCGAT-TGTTAT TTG ATAACATAACGCGACTACAGCGC TTAGGTCCAAACCTT  70 105
JN178_RS18430 NONE
JN178_RS18435 4175155 .. 4175170 + -11.8  -3.12749   TCTAAATAGCAAATA              GGCGGG TTGC CCCGCC               TATTCAAGTTATTCG  83 25
JN178_RS18485 NONE
JN178_RS18490 4188573 .. 4188589 +  -2.2  -2.71011   ACATGTCTGACACCA              CTGTGT GGCCA GCGCAG              TAGTTCACAAGGAGT  40 6
JN178_RS18495 NONE
JN178_RS18500 4193096 .. 4193112 + -13.7  -5.84381   CGTGTGTGTTCATTA              GGGGCGT CTA ACGCCCC              TTTTTTTATTACTAG 100 55
JN178_RS18510 4197203 .. 4197230 + -14.2  -3.16676   GCAGTAACAAAGCAA        CTGCCGCTTGTA ACAG TGCAGGCGGCAG         TCTTGAATTGATAAG  95 34
JN178_RS18515 4200232 .. 4200249 + -12.7  -5.95539   TCTCGTGTGAGTTCA             GGCCGCT TTAT AGCGGCC              TTTTTTTATTTACGC 100 50
JN178_RS18520 NONE
JN178_RS18525 4202688 .. 4202716 + -16.1  -5.42265   GAGCGCAAACAAAAA        TGCCGCTTAGTCT TTA AGACTTAGCGGCA        TTTTTTATAGTTTAG 100 47
JN178_RS18540 NONE
JN178_RS18545 NONE
JN178_RS18550 4210912 .. 4210923 +  -5.8  -3.22884   ACTGATAGCATCTAG                CCCT TCAA AGGG                 TTCATCAATTAGTAA  54 171
JN178_RS18580 4218830 .. 4218855 +  -3.3  -5.02074   GCATTTTGCTTCAGG         CTAACGCTATT ATGA AAAAGCGTTAA          TTTTTTAACGGGTAC  71 71
JN178_RS18585 NONE
JN178_RS18590 4221794 .. 4221834 +  -4.2  -4.35604   AAACATAGATACAAG TGT-TGTTATAAGGCCGG CTAGCGC CCGGCC-TGTAGCAGACA TTTCTTGTGCCTTAG  64 379
JN178_RS18600 4222865 .. 4222882 + -10.5   -5.9663   CAAAAAAATACCTAA             GGGCGCC ACCA GGCGTCC              TTTTTTTTGATCTTT 100 52
JN178_RS18605 4223373 .. 4223389 + -10.8  -5.64274   AAGAATTCCACGAAA              CCCGCC GCCAA GGCGGG              TTTTTTTATGGCTCG 100 251
JN178_RS18610 NONE
JN178_RS18615 4224670 .. 4224681 +  -3.6  -3.29144   TTCAACGCGAAAGAA                GGTC GGTA GGCC                 TTGTCGAACAGGTGA  49 17
JN178_RS18620 NONE
JN178_RS18625 NONE
JN178_RS18630 4227814 .. 4227842 + -19.1  -3.21695   CCACTAGCGCAATTG        TAAAAGAGCAGGC TAT GCCTGCTCTTTTA        TTAGGTTAGTCGTGG 100 64
JN178_RS18645 4232401 .. 4232414 +  -3.1  -2.71918   TGAGATTAAGTAACC               TCTTG TTTA CAGGA                CTATTTATGACATCA  43 28
JN178_RS18650 NONE
JN178_RS18655 NONE
JN178_RS18660 4234756 .. 4234779 +  -7.4  -3.62597   CACAGGCTTGGTAAA          GGTGCTTTCT TTAT GGAACGCACC           TTCTTGCGCACTACC  67 75
JN178_RS18755 NONE
JN178_RS18760 NONE
JN178_RS18765 4258619 .. 4258647 + -10.4  -3.64371   CTGCCTTTATAGTAT        GAAGGGGCTT TAAGTGTGT AAGCCCCTTC        TTTCCACTCTCAATT  81 42
JN178_RS18770 4259848 .. 4259887 +  -4.4  -3.73386   CGTACGAACTCTTAC  GCTGCATTCTTACTGCG TTAATCC CGCAG-AGTAATGTAGC  TTTCGCTCATTATCT  57 43
JN178_RS18800 4268455 .. 4268469 + -11.4  -5.14698   GTTGTGATTTTTTAA               GGGGCT TTT AGCCCC               TTTTCTTTTGCCTTT 100 167
JN178_RS18805 4268930 .. 4268951 + -14.5  -3.54424   TAATTCATAAAAAAA           GGCCGTGTT AATT AACACGGCC            TTTCACAAAGTAAGA 100 65
JN178_RS18820 4271658 .. 4271668 +  -6.8  -2.90813   CGTGCCACTCTCAAA                 CCCT AAC AGGG                 TAGTTTGCGCAAGTG  58 322
JN178_RS18845 NONE
JN178_RS18850 4274864 .. 4274879 + -10.4  -4.77036   AAAATAAATACAAAA              GCCCCT AAGT AGGGGC               TTTTTCATGCTAACC  91 67
JN178_RS18865 4279182 .. 4279230 +  -6.8  -4.04587   AGCATATAGGCGAAT TTTGGGGTGTGAGTGTTGGC CAGTATTCA GCCAACACTCACACGTGACA TCTTTATTTTTCAGC  71 96
JN178_RS18875 4281540 .. 4281568 + -14.7  -3.24245   TGTTTGAGCAGATAT        AAAAAAGGCAGCC AGT GGCTGCCTTTTTA        TTAGCTTGTGCATGA 100 24
JN178_RS18920 4296217 .. 4296231 +  -2.8  -2.80113   CGTTAAATCAAAAAT               GAATGT GAA ACAATC               TGTAGTGAGCTAGTG  42 167
        speB 4297250 .. 4297269 + -10.7  -5.74086   AAAGATTAAAAAAAA            CGGGGCA TTTCAC TGCCCCG             TTTTTTATTTACTTT 100 58
JN178_RS18950 4304260 .. 4304278 +  -6.7  -2.96274   CAGCTTATTGAGTAG             CGGTCTG TGCTT TAGACCG             TCTCCTTGTGAGCAC  58 26
JN178_RS18970 4308455 .. 4308482 +  -4.8  -3.48144   CGTTTTTTCGAAAAA        GCCGACGCTA ACAAATCG TAGTGCCGGC         TATTTACATATTATT  56 5
JN178_RS19000 4317405 .. 4317426 + -14.5  -2.77538   GTTGGCCCTACATTC           GTGGCTACC ACTT GGTAGCCAC            AGTTTTTATTCAGGA  95 66
JN178_RS19005 4318999 .. 4319012 +  -8.1  -3.74693   TAAAATTCACCAGTT               CGGCT TACA AGCCG                TTTAATCGACTAACC  75 7
JN178_RS19010 NONE
JN178_RS19015 4320477 .. 4320504 +    -2  -3.61398   CATTCTTTTTGACTA        GCATACT-GTTGC TGT GTAGCTAGAATGC        TTATTGAGAAGCGCC  48 25
JN178_RS19035 4326251 .. 4326280 + -12.3  -4.70879   CGGCGCATTAAAAAT       GCGAAGCTCGCCTT ATT AAGGT-AGCTTCGC       TTTTTCGCGTTTACG 100 49
JN178_RS19040 4327000 .. 4327013 +  -2.3  -3.63341   CAATGCCTTCAACGG               TGGCC GAGC GTCCA                TTGTTAGGCGATATT  49 478
JN178_RS19050 NONE
JN178_RS19055 4331694 .. 4331733 + -10.7  -2.91429   CTGACGATACCATTG  TGCTTCGCTCGCGCGTG CAGTAA CACGCAAAAGCGAAGCA   TCTCTCGCCCTTTTA  77 3
JN178_RS19060 NONE
JN178_RS19065 4333937 .. 4333949 +  -3.4  -4.20367   TTTTCACAGGACCAT                GTAC CTTAA GTAC                TTCTTTCTTAAACAC  60 124
JN178_RS19075 NONE
JN178_RS19080 NONE
JN178_RS19085 4336969 .. 4336992 +  -8.2  -2.80195   CCAGATTCGGGTAAA          CCACTTGGTGC CGT GCGCCAA-TGG          TAATTAGTGATACCT  60 483
JN178_RS19095 NONE
JN178_RS19100 4341334 .. 4341357 + -11.8  -4.66535   AGTAGATACAAAAAA          GGCGCTAACTC TTC GAGT-AGCGCC          TTTCTTTTAAGCGTT 100 36
JN178_RS19105 4343255 .. 4343269 +  -4.2  -3.38415   TAATACATGAAAAGC               GGCTGT GTT ACAACC               TCTCTTTATGATTCG  53 507
JN178_RS19110 NONE
JN178_RS19115 4344813 .. 4344823 +  -5.4  -3.24021   AACCTTGTACTAACG                 GAGT CTC ACTC                 TTGACTGTTTGAGGC  56 39
JN178_RS19120 NONE
JN178_RS19125 NONE
JN178_RS19130 NONE
JN178_RS19135 4347744 .. 4347760 +  -4.4  -4.15669   AACTCGATCTTATAT             CG-CCTC TCAG GAGGTCG              TTTCCTTTATCCATT  61 107
JN178_RS19140 4348584 .. 4348607 +  -6.6  -4.18702   ACTGACCAAAAAAAA          GGCGCTGAGT CTAA ACCCAACGCC           TTTCTTAAAGCTTCT  71 49
JN178_RS19160 NONE
JN178_RS19165 NONE
JN178_RS19170 4354840 .. 4354853 +  -6.7  -3.07088   GACCAGTATTTTGCT               GCGAA ATCT TTCGC                TATCTCTATAATCAT  60 93
        aroQ NONE
JN178_RS19180 4355899 .. 4355924 +  -2.7  -2.78216   TCATTGAATAAGCGA         GTACTTCA-CTA TGC TAGATAAAGTAC         TAATTGCTAACCGTG  42 30
        accC 4357261 .. 4357292 +   -11   -4.4727   AGCCTAATCCCCCCT      TTGGGCTACACG CTGTTTTT TGTGTAGCCCAA       TTTTCTCGCTATTCG  90 34
JN178_RS19190 4357589 .. 4357606 + -12.7  -5.72207   CCACCTCCACTTATG             GCCGGCA CCCT TGCCGGC              TTTTTTTACTTTAAC 100 182
JN178_RS19205 4360783 .. 4360818 +  -9.7  -2.67244   GTCAACAATTGCGCC    GCAGCCTCAGCGTCGC TTAAT GCG-CGGTGATGCTGC    TCCATTTCAATATCA  68 421
JN178_RS19220 NONE
JN178_RS19225 4363988 .. 4364004 + -10.1  -4.81249   AGTTATGTAAAAAAA              CCTGCCG CTT TGGCAGG              TTTTTGCGTTTAAGG  91 152
JN178_RS19230 4364405 .. 4364425 + -12.5   -5.4251   TATTCACATTTGAAA            GCCCCGACG ACA CATCGGGGC            TTTTTTATGTGTCAG 100 67
        prmA 4368108 .. 4368140 +  -7.8  -2.72043   TGTTAATTTTTTTCA      CATTACAGCCCTTT TAAAC AAAGGGCTGTAAGA      CTTTAGAAGAAAATT  62 68
        dusB NONE
         fis 4369700 .. 4369717 + -11.3  -5.27335   GCTTTGCCCACCAAA             GAGCACC AATC GGTGCTC              TTTTTGTTTCAACAC 100 51
        purH 4371383 .. 4371421 + -12.5  -2.52464   CTCAATGATGAAAAC   ACTCGAGGTAGAGGG ATAAATACG CCCTCTACCTCGGGC   TACCTTAAGCGACAA  89 53
JN178_RS19265 NONE
        purD 4373740 .. 4373757 +  -9.8  -5.10461   TGCTTACACAAAAAA             CGCGGC TTTTAT GCCGCG              TTTTTATTACCTGGC  93 79
JN178_RS19280 NONE
JN178_RS19285 4376881 .. 4376891 +  -5.4  -4.25053   CACCGGTATAGCAAT                 GCTT GAT AAGC                 TTGTTTCTGTTGTCA  67 363
JN178_RS19295 4378946 .. 4378973 + -11.5  -4.13014   CTTCGGTAGCTTTTA        CAAGCAGTTAT TCCCTT ATAACTGCTTG         TTTTCCCACTATAGA  90 43
        ompR 4379857 .. 4379869 +  -3.3  -2.80816   CATGACCTTGTTGTG                CAGCA CCA TGCGG                TGTAATACCTCGCAC  44 70
        envZ NONE
JN178_RS19320 4385931 .. 4385947 +  -6.5  -3.01831   CCGGTCCAGCTTTAA              CGATAGC GTC GCTAACG              TCGTATTTTTCAAAA  58 188
        gspC NONE
        gspD NONE
        gspE NONE
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
        gspK NONE
        gspL NONE
JN178_RS19390 NONE
JN178_RS19395 4400862 .. 4400875 +  -5.3  -3.53444   TAACTAAAATACTCT               TATGC CATT GCATA                TTTGCAAGGGCATGC  57 43
JN178_RS19400 4402380 .. 4402417 + -15.9  -2.64925   AGTACGCCTTAATCA   TGGTGAACATTACTCTT GGTC AAGGGTAATGTTCATCA    GTTCTACTGCGCTGT 100 53
        nudE NONE
        cysQ 4408068 .. 4408095 +  -5.6  -3.78953   CCCGCGTATAATAAT        GCAGTAATGTTGC TGG GCTACATTGC-GC        TTTAATGATCACCAT  62 75
JN178_RS19435 4408771 .. 4408787 +  -9.4   -5.5074   CGGTTAAACAAAAAA              CCGCAC ATTAC GTGCGG              TTTTTTATTCGCTTA 100 62
JN178_RS19450 4413654 .. 4413675 +  -7.9  -5.58522   CTCCTCAGGCAGGTT           AGCCGGGTT GCTC GACCCGGCG            TTTTTGTTTTATCTA 100 49
JN178_RS19475 4417910 .. 4417933 +  -7.6  -3.65314   AAGTGCGATAAAGAA          GTGTGAAC-AT GTT ATCGTTCACAC          TTCTTAAACATTAGG  70 94
JN178_RS19490 4419878 .. 4419888 +  -5.4  -4.20783   TTTCTCTGCCTGCTT                 CTGT GTC ACAG                 TTTCTTCAATGGCGT  67 216
        fkpA 4422294 .. 4422314 + -11.1  -5.68438   GATATAAAAGAGAAA            GCCGACACA CAA TGCGTCGGC            TTTTTTGTTTAGTGA 100 70
        greB 4423561 .. 4423579 +  -7.4  -2.85361   GACTTATACTAAACC             GCGGTG CTATACT CACCGC             TCAATTTTTCACTCG  60 110
JN178_RS19520 4426417 .. 4426429 +  -9.1  -4.66987   ACTACTTTCACTTTC                TCGCG CTT CGCGA                TTTTCTTCAGCTATG  90 419
JN178_RS19540 4429637 .. 4429647 +  -4.6  -3.38768   AGGTTAAGTTACTTT                 CGTC AAA GGCG                 TTATCAATGGTATCG  52 492
        nfuA 4432612 .. 4432655 +  -6.6  -4.12037   CACCAAGCTGGCGAG CACTCTTACTACTAGGCGAG TTCG CTCGCCCAGTAGCGGTAGCG TTTATGCTATTTCTC  71 11
JN178_RS19560 NONE
JN178_RS19565 4434109 .. 4434121 +  -3.3  -2.89824   TGCGGGCAACAAACT                GTGTG CTA CTCAC                GTTATTCGTTAGTAG  45 1
JN178_RS19570 4434796 .. 4434810 +  -5.6  -3.46511   AGGGCATGTCTATAA               GTAGGC TAC GCCAAC               TTGTCCATTCTATAG  57 39
JN178_RS19580 4437688 .. 4437709 +  -3.8  -3.22884   TAAATTGACTGCGAC           CGT-CTGAT TGCGC ATCAGTACG           TTCATCGCTTCATCA  48 389
JN178_RS19615 4442206 .. 4442235 +  -9.2  -3.16267   TACAGGGTTAATCAC       GCCGAACCCACG GCCTTA CTAGGGTTCGGC        TTGCGTCTAGTTAGA  74 4
        plsB 4454259 .. 4454295 +  -3.7  -5.52023   TGCTCTAACAATAAA   GCCCAAAC-CGCCTTGG AAAAA CCTT-GCGCGTTTGGGC   TTTTTTATTGCTGCT  83 56
JN178_RS19665 NONE
JN178_RS19670 4460859 .. 4460871 +  -4.8  -3.01712   GTAGGCATACACATT                CGGT CGAAT ACCG                TGTTCAGCAAACCAA  51 253
        ilvC 4463168 .. 4463188 + -16.9  -5.24129   TAACTAAGCCCTCTT            GCCCGACCA TTT TGGTCGGGC            TTTTTTATGCGCGAC 100 64
JN178_RS19685 NONE
JN178_RS19690 NONE
JN178_RS19695 4468271 .. 4468287 +  -7.2  -4.41716   GTTCTTGAATCCAAA              GCCTCG CTAGT CGGGGC              TTTATTATATAGTAT  78 56
JN178_RS19700 4469427 .. 4469448 +  -8.8  -3.33815   TGAACAGATTTATGA           CAGGTTGA AGAGCC TCAACCTG            TTAATTAGCCACGAT  72 125
JN178_RS19705 4471279 .. 4471302 + -11.8  -5.09426   AGCTTGCTCTCAATT          CAAAGCCAGC GGAA GCTGGTTTTG           TTTTTTGGGGTTCAA 100 39
JN178_RS19725 NONE
JN178_RS19730 4481826 .. 4481843 +  -7.7  -2.74514   AACGAATAAGCACCA             TCGCCTT ATTG AGGGCGA              TGGTTAGCCATTTCC  62 32
JN178_RS19745 4483683 .. 4483695 +  -7.7   -3.2794   ATGGTCCACTGATAC                CCTTC AAA GAAGG                TTGATATCAATAGCG  65 156
JN178_RS19770 NONE
JN178_RS19775 4490295 .. 4490314 +   -10   -5.5074   CTTAATAGATTGAAA            GCCCGC-AC TAA GTCGCGGGC            TTTTTTATTACATTA 100 56
JN178_RS19780 NONE
JN178_RS19785 4492404 .. 4492414 +  -6.8  -4.17132   AAGTTCCATACTAAA                 TGGC AGC GCCA                 TTTGTTCAGCACTTT  71 101
JN178_RS19800 NONE
JN178_RS19805 NONE
JN178_RS19810 NONE
JN178_RS19815 NONE
JN178_RS19820 4498306 .. 4498317 +  -5.8  -3.36803   TAATACACTGCCAGT                GCCA AACG TGGC                 TTGTCACTAAAATTC  58 4
JN178_RS19825 NONE
JN178_RS19830 4499457 .. 4499475 +  -7.3  -4.74132   CGACTTAGAATAGAA             GAGGCGC TACGC GCGCCCC             TTTTTAATGACATAT  81 28
JN178_RS19850 4502231 .. 4502261 + -12.6  -4.62069   GAGTCCAAACACCTC       CGCTAGAGCCCAGT AAT ACTGGGCTTTTGTG       TTTTTAACGTCCAAA 100 50
JN178_RS19855 4502758 .. 4502768 +  -3.2  -3.53733   TACTCACATGCTGAG                 CGTT TAA AGCG                 TCTTTATGAAATGAA  49 85
JN178_RS19860 NONE
JN178_RS19865 4503988 .. 4503999 +  -5.8  -4.14243   AATATGCTAAAGGAA                GAGC TGAT GCTC                 TTTTACGCTCAGCTC  65 208
JN178_RS19875 4507743 .. 4507753 +  -5.4  -3.14294   AGTTTTTTTACTTTC                 CTTC TCC GAAG                 TTAAATCTGCATATT  54 356
JN178_RS19920 NONE
JN178_RS19925 NONE
JN178_RS19930 4528496 .. 4528511 +  -6.2  -3.79678   AGTACGAGTAAAAAC              TGTTTC ATGT GAAACA               TTATTGTAGACCGTT  64 30
JN178_RS19935 4529051 .. 4529076 +  -6.1  -5.22312   ACAAGCGAACAAATA         ATAATGCCACC CGCA GGTGGCACTAA          TTTTTTGCTATCAAT  84 25
JN178_RS19955 4532408 .. 4532425 +  -4.9  -3.63744   TAACGCTATTGCATT             GCAATAA AGCC TTGTTGC              TCTTTTACCAAGCCA  57 72
JN178_RS20060 4552814 .. 4552829 +  -2.5   -2.8085   TGAGCAGCAGACAAG              CGCAG GAGCTA CTGTG               ATTTAAGTAAGTTGC  42 9
JN178_RS20070 4554788 .. 4554800 +  -3.3  -2.85699   GCTTCTAACAACTCC                ACCTG CGG CAGGG                CTTTAATGGGTAGCT  44 33
JN178_RS20075 4555983 .. 4555997 +  -6.4  -3.15249   TCTCAAACCAAATAT               CTGTGC CAA GTACAG               TTGCTACACCATCTA  57 479
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 4557987 .. 4558006 -   -15  -4.66938   ACTTGTAAGACAAAA            CAGCCCGC TTAG GCGGGCTG             TGTAATTGAGTGATC 100 47
JN178_RS20085 4557430 .. 4557453 -  -3.8  -3.59023   TTGAGACAAGCAGAA          CGCCCC TAAGGATTAAAT GGGGCG           GTAGTATAATGATGT  53 48
JN178_RS20080 4555398 .. 4555417 -  -4.2  -3.71607   GGAAGACCACCCAAA            GCAACCCC TGAG AAGGTCGC             AGAGCTACGCACAAG  55 415
JN178_RS20065 4552862 .. 4552874 -    -2  -4.35604   GTAATTGATAACAAA                TTGA TAGCG TCAA                ATACCAATAGAAATA  57 22
        mnmE NONE
JN178_RS20050 4549977 .. 4549989 -  -4.1  -2.97475   TTCGTTATCATAAAT                GATCA AGC TGACC                TTCAAACCATTCCAC  47 5
JN178_RS20045 NONE
JN178_RS20040 4548312 .. 4548322 -    -4  -4.57353   CTTGAGTAGATAAAA                 CTTT TAT AAAG                 CGTGAGAAGTCCGAC  66 173
JN178_RS20035 4546178 .. 4546189 -  -4.4  -3.84185   CTGATCGAAATATAA                GATC TTAA GATC                 TCTTTTAGATCTGTT  57 493
        mnmG 4544029 .. 4544072 - -11.1  -3.06696   GTGCCGGCGAACACA CTTTGCCGAGATCGTCACA ATAATA CGCGAAGATCTCGGAAAAG CTAAGTGCTTGTGAT  80 65
        rsmG NONE
JN178_RS20020 NONE
JN178_RS20015 4541451 .. 4541474 -  -3.1  -3.02211   TAACCGGAAAGGAGA          GTGTCCGCT TGTGAC AGCAGACAG           TGCATCTATTGCGGG  45 78
JN178_RS20010 NONE
        atpB 4539970 .. 4539998 -  -3.8  -4.58685   AAACTCGGTTAAAAA        CGGTACCGACAA ACATA TTCCCGGTACCC        GTTAATTCTTAGTGG  66 34
        atpE 4539623 .. 4539648 -  -3.9    -4.731   AATTGACCAATAAAA         GTGGCGTTAAT ATTC ACTATCGCCTC          TCCTCATAAAAGTTC  68 54
        atpF 4539150 .. 4539164 -  -2.8  -2.52543   ACGGTTGTCAATTCA               GACATG GCT CATCTC               CCTATTAAAGCTCAG  41 30
        atpH NONE
        atpA 4537036 .. 4537059 - -12.5  -2.95919   ATTACTCAACGAAAT          GTGCTGGTG GTTAAA CACCAGCAC           CATTGATTACCAAGT  91 32
        atpG NONE
        atpD NONE
        atpC 4534215 .. 4534230 - -11.8  -5.52023   ACGACCAACAAAAAA              CCCGCC AAAA GGCGGG               TTTTTATAATAATAG 100 49
JN178_RS19965 NONE
JN178_RS19960 4532335 .. 4532364 -  -4.3  -3.71527   TGGCAAGCACCTAAA       GCAC-ATTTAAGGG AAC CCCAGAAATAGTGC       TATTGGCGTCACATA  57 59
JN178_RS19950 4531362 .. 4531387 -  -4.7   -3.7732   TCGTTATATCAATAA         GAAAGGCA-CGC CTA GCGGCGCTTTTC         GTCGCGTTAATACGT  60 32
JN178_RS19945 4530000 .. 4530011 -  -5.8  -3.99324   CTCTACTATGAGAAA                CCTG AATA CAGG                 GTTAACAAAAATACG  66 151
JN178_RS19940 4529052 .. 4529075 - -11.8   -4.2416   CAAGCGAACAAATAA          TAATGCCACC CGCA GGTGGCACTA           ATTTTTTGCTATCAA  93 46
JN178_RS19915 4521033 .. 4521066 - -11.8  -2.61831   CCTAGGGTAAAAAGC     CCCGCTAACACGCA ACCCAA TACATGCTAGCGGG      TAACACACCCCACAG  81 42
JN178_RS19900 NONE
JN178_RS19895 4516042 .. 4516075 - -13.9  -2.87206   GAATATTGAGTAAAG     CATTAGGCTCCGCTT TGTG AAGCGGAGCCTTTTG      ATTTTTTTAAAATAC  93 32
JN178_RS19890 4513780 .. 4513790 -  -3.2  -2.63631   CGAAGTTCGACATTA                 GAGA CTG CCTC                 CTATCTGAATAACTC  43 12
JN178_RS19885 NONE
JN178_RS19880 4507446 .. 4507460 -  -5.8   -3.0127   TTATGGAATCATATA               CATTAT CTA ATAATG               CCTTCATGTTTTGGC  56 29
JN178_RS19870 4503501 .. 4503513 -  -4.1  -3.91197   CCATAAACTACCAAA                GATGC AGC ACATC                TATAACAAGTACTCT  57 456
         rph NONE
        pyrE NONE
        tusA 4499457 .. 4499475 -  -9.5  -3.76568   CGACTTAGAATAGAA             GAGGCGC TACGC GCGCCCC             TTTTTAATGACATAT  79 13
JN178_RS19795 4492743 .. 4492779 -  -4.6  -2.78526   GTTGATAATACATGA   CGT-GCGGTATGT TAAACTTTGGGG ACATACCGCTACG    AAATAATGCTTTGCG  48 67
JN178_RS19790 4492263 .. 4492278 -  -3.2  -3.55444   TTCCTACTCGCCAAA              CGCTTG AGCG CAAGAG               TTGATATGCGAAAAG  50 127
        proB 4485894 .. 4485906 -  -6.3  -3.19192   GTGCATTTAACCTAA                CCATA AAA TATGG                GCATTTTAGTTAGGC  57 73
JN178_RS19760 NONE
JN178_RS19755 NONE
JN178_RS19750 4483468 .. 4483478 -  -6.8  -4.35524   CGCGCAAATTGAAAA                 GCTC ATG GAGC                 GCATTGAAACGCTGG  74 118
JN178_RS19740 NONE
JN178_RS19735 4481823 .. 4481846 -   -11  -3.03644   AAAAACGAATAAGCA          CCATCGCCTT ATTG AGGGCGATGG           TTAGCCATTTCCTGT  79 10
JN178_RS19720 4473805 .. 4473820 - -10.4   -5.4833   TGAGGGAATAAAAAA              GCGCGT TAAG ACGCGC               TTTCAATGTAGATAG 100 113
JN178_RS19715 4472262 .. 4472274 -  -2.7  -4.03204   TAGGAAACGGACAAA                GTTTA CGC CAAAC                ATGGACAACTTTAAG  53 271
JN178_RS19710 4471284 .. 4471297 -  -8.1  -2.84878   GCTCTCAATTCAAAG               CCAGC GGAA GCTGG                TTTTGTTTTTTGGGG  66 42
        ilvY 4460385 .. 4460396 -  -7.2  -3.17392   TATGCGCCAAGGCAA                GCCC AATG GGGC                 GCTAAACGCAGGTGA  62 257
        ilvD NONE
        ilvA 4454380 .. 4454400 -  -8.3  -4.11216   GCTGCACCTCGAAAA            GCCTTGCCA ACA TAACAAGGC            CAGTCAGACTAACTA  79 38
JN178_RS19645 NONE
        lexA 4447157 .. 4447172 -  -7.5  -5.66684   TAAGGTACAAAAAAA              GCGGC TACAAG GCCGC               TTTTACGTTAACCTG 100 49
        coxB NONE
        ctaD 4443827 .. 4443839 -  -3.4  -2.79183   CTGACTGTTATGACA                GTGA TTACT TCAC                TACAGGTGGCGTTTC  44 17
JN178_RS19625 NONE
JN178_RS19620 4442205 .. 4442236 -  -5.7  -2.72991   GTACAGGGTTAATCA      CGCCGAACCCACG GCCTTA CTAGGGTTCGGCT       TGCGTCTAGTTAGAG  52 35
JN178_RS19610 NONE
JN178_RS19605 NONE
JN178_RS19600 NONE
JN178_RS19595 NONE
JN178_RS19590 NONE
JN178_RS19585 4437424 .. 4437435 -    -3  -3.49864   CGTATATAAGAAAAC                GTTT ACCT AAAC                 ATCACGGGCAAAACG  47 20
JN178_RS19575 4434796 .. 4434810 -  -5.6  -3.31263   AGGGCATGTCTATAA               GTAGGC TAC GCCAAC               TTGTCCATTCTATAG  56 16
JN178_RS19555 4432597 .. 4432609 -  -5.5  -3.68988   CGTGACGCAACAGAA                CACCA AGC TGGCG                AGCACTCTTACTACT  59 129
JN178_RS19545 4428924 .. 4428940 - -10.1  -3.75153   CTTGTCCAAGGCAAA              GCGCGCT GAC AACGCGC              GGCAAACATATCGGC  80 330
        bioH NONE
JN178_RS19530 NONE
JN178_RS19525 4425972 .. 4425988 -  -6.5  -4.21768   TAACCAAGTGCAAAA              CAGTGCC ATG GGCAATG              CGTTTGCCGATGCCT  70 142
JN178_RS19505 NONE
JN178_RS19500 4420029 .. 4420043 -  -2.8  -2.95652   TTTAGTGAACTAAAT               CGCT AGTTCAA AGCG               CGATAACCCATAACG  43 61
JN178_RS19495 4419687 .. 4419705 -  -3.8  -2.74926   AGAAAGCACAGACTA             GGTTGTAC ACA ATACACCC             GTGATTATACTGTGC  45 108
JN178_RS19485 NONE
JN178_RS19480 4417907 .. 4417936 - -11.7  -3.92143   GAAAAGTGCGATAAA       GAAGTGTGAAC-AT GTT ATCGTTCACACTTC       TTAAACATTAGGTCT  90 33
JN178_RS19470 NONE
JN178_RS19465 NONE
JN178_RS19460 4413917 .. 4413929 -  -3.3  -2.96452   ATTGGGATAATCATA                CAACC TCC GGTAG                GTCTACGTTAACACT  45 65
JN178_RS19455 4413220 .. 4413234 -  -4.2  -2.74488   GAATCATTTGAACCA               GACGGC CTT ACCATC               AACGGTAAATACCTG  45 479
JN178_RS19445 NONE
        mdoH 4408771 .. 4408787 - -10.1  -5.63517   CGGTTAAACAAAAAA              CCGCACA TTA CGTGCGG              TTTTTTATTCGCTTA 100 49
        yrfG NONE
        yjjX 4405148 .. 4405185 -  -7.8  -2.81208   GGTTAGGGAAAAGAT   TTCAGAGACACGGC TATCGATAAC GCCGTGGCTCTAAA    TAGATTTATAGCAAA  62 54
JN178_RS19410 4403540 .. 4403569 - -12.3  -2.64872   TGTATTCAATAATAG       GCAAAAAAGGGAG CAAG CCCCCTTTTTTAC        GCACATTTATGAGCG  85 45
JN178_RS19405 4402288 .. 4402318 -  -6.8  -3.52717   ACGAGACACAATTAA       CCCTTAAAGATGGC AAA GCCAACGTTAATGG       CACTCCCATACCGTT  62 96
        hslR NONE
        hslO 4387861 .. 4387892 - -14.6  -3.35604   AAGAGGAGAGAAAAG      GAAACACTGCAAGC ATAG GCTTGCAATGTCTC       ACAATGTTGATGTCA 100 95
JN178_RS19325 4385833 .. 4385852 - -10.7  -5.25803   AATCCGCATAAAAAA            GCCCGCA ACACGG TGCGGGC             AAAACATCGATCACG 100 81
JN178_RS19315 4382489 .. 4382507 -  -8.8  -5.79595   GGTGAAAACAAAAAA             GGGCGC TTCACGT GCGCCC             TCTGCTGTCTAATGA 100 53
JN178_RS19310 4381090 .. 4381107 -  -2.6  -3.87815   GCTCAGGGTGATAAA             GCCAGA AACTCA TCGGGC              TCAGGACTAGGACTT  54 184
JN178_RS19290 4376582 .. 4376598 -  -6.6  -2.58491   CACAAATACTAACAG              CATCCT TCCCG AGGATG              TGATAGCGAAGATTA  56 38
JN178_RS19275 4373740 .. 4373757 -  -9.8  -5.36441   TGCTTACACAAAAAA             CGCGGC TTTTAT GCCGCG              TTTTTATTACCTGGC 100 47
JN178_RS19240 4366098 .. 4366111 -  -4.5  -2.66695   TGTTTCAGCAAACAT               GCCCA GAGT TGAGC                CAGTCGTACTTTTTA  47 128
JN178_RS19235 4364405 .. 4364425 - -14.7  -3.64103   TATTCACATTTGAAA            GCCCCGACG ACA CATCGGGGC            TTTTTTATGTGTCAG 100 52
JN178_RS19215 NONE
JN178_RS19210 4359892 .. 4359908 - -10.9  -3.65224   ACTTTAGTCTAATAA              CTAAGCC AAC GGCTTAG              TTAGACGTATTGAAA  83 512
JN178_RS19200 4358625 .. 4358636 -  -4.4    -5.011   ATTCAAACAATAAAA                TAGG TGGG CCTA                 GTGCATTGTTATTTT  73 83
JN178_RS19155 4350910 .. 4350933 -  -9.6  -3.93288   TGCTAGGCAAGTAAA          CGCCGTTTGT CGCG ATAAACGGCG           TGAAGGTCGATGGGG  81 60
JN178_RS19150 NONE
        groL 4348584 .. 4348607 -   -11  -5.86965   ACTGACCAAAAAAAA          GGCGCTGAGT CTAA ACCCAACGCC           TTTCTTAAAGCTTCT 100 137
JN178_RS19090 4336555 .. 4336574 - -12.2  -4.72272   GTGCCTTATCAAAAA            TAGGACGC GTCA GCGTCCTA             GCCTCTGGCAACAAG 100 23
JN178_RS19070 4333367 .. 4333381 -  -7.1  -3.33798   GAAATACGAGATTAA               TCGCG CTCAT CGCGA               GAAGAGTCTGTTAAT  63 519
JN178_RS19045 4326250 .. 4326281 -  -6.6   -4.7254   ACGGCGCATTAAAAA      TGCGAAGCTCGCCTT ATT AAGGT-AGCTTCGCT      TTTTCGCGTTTACGC  79 295
JN178_RS19030 4322938 .. 4322952 -  -2.1  -3.14848   CGTTGTGATTAAAAG               GCTTC GAATG AAAGC               GTGGTGGTGTAGCTA  43 4
JN178_RS19025 NONE
JN178_RS19020 4320244 .. 4320261 -  -3.3  -4.13767   TTTTCTACGCTAAAA             CGCCAAG CCAC CTCGGTG              GGCTTGCCTGCTAAA  57 269
JN178_RS18995 NONE
JN178_RS18990 NONE
JN178_RS18985 4311041 .. 4311058 -    -7  -5.60689   GTATAGAACAAAAAA             GGAAGC ACTATG GCTTCC              TTTTTTAGCATCTTA  93 63
JN178_RS18980 4310426 .. 4310443 -  -7.7   -2.7736   ACCTATATCTAATGA             GCTAAGC GCAT GCCTAGC              ATGGTAAGTGCAAAA  62 129
        speA 4308455 .. 4308482 -  -4.8  -4.56597   CGTTTTTTCGAAAAA        GCCGACGCTAACA AAT CGT-AGTGCCGGC        TATTTACATATTATT  70 36
JN178_RS18965 4305631 .. 4305645 -  -6.4  -3.04144   GTTGCACTCTCAATA               CGTGCT TGT AACACG               CACTTTCAACTAATT  58 48
JN178_RS18960 NONE
JN178_RS18955 4304199 .. 4304221 -  -9.9  -3.26722   TGCACATGCAGAAGA           CGCGCTTTA TCAAG CAAAGCGCG           ATGGAAGCAATTTAG  72 53
        glmU 4301172 .. 4301201 -  -6.4  -5.73339   ACAAGCATAAAAAAA       CGGAGCGTCTTT ATTAAA AAACTCGCTCCG        CTTTTTTATTAGCTA 100 59
JN178_RS18940 4300005 .. 4300019 -    -5    -3.452   GGCAAACACGCATAA               CTTTCA AAA CGAAAG               CTATGAATTATATTT  56 86
JN178_RS18935 NONE
        glmS 4297250 .. 4297269 - -10.7   -5.9663   AAAGATTAAAAAAAA            CGGGGCA TTTCAC TGCCCCG             TTTTTTATTTACTTT 100 76
JN178_RS18915 4291584 .. 4291599 -  -7.6  -2.76315   TCAACAGTTCGAAAT              CGAACA AAGT TGTTCG               TTTTTAACGTGTAAA  62 473
JN178_RS18910 NONE
JN178_RS18905 NONE
JN178_RS18900 4286976 .. 4286999 -  -9.5  -3.75332   ACTCCTTAAGTGAAA          GCCCCAGTC TTTGGG GACAGGGGC           TTTGTGTAGTTTATG  79 54
JN178_RS18895 NONE
JN178_RS18890 NONE
JN178_RS18885 4282947 .. 4282957 -    -4  -4.36914   TGTTGCTTCATAAAA                 TACT CAT AGTA                 ATAGGGGAAAAATTG  64 238
JN178_RS18880 4281546 .. 4281562 - -13.7  -5.43414   AGCAGATATAAAAAA              GGCAGCC AGT GGCTGCC              TTTTTATTAGCTTGT 100 50
JN178_RS18870 4279023 .. 4279037 -  -4.3  -3.16564   TTTTCATTTTAGCAA               TGATG TTTCT CATCA               GTGCATTGGTGGTAT  50 222
JN178_RS18860 4276344 .. 4276379 - -21.4  -2.77678   TAATACCTAAGAGTA    CGCCTGTATACACTTG GGCA CAAGCGTATACAGGCG     CTTTTTAAATATAGT 100 42
JN178_RS18855 4274864 .. 4274879 - -10.4  -4.95487   AAAATAAATACAAAA              GCCCCT AAGT AGGGGC               TTTTTCATGCTAACC  93 55
JN178_RS18840 4273127 .. 4273141 -  -3.5  -4.71426   CTTTGATTAAGAAAA               CGAAG GAGGT CCTCG               GATAGTGATTTCGCG  67 2
JN178_RS18835 4272430 .. 4272457 -  -5.7  -3.74025   AGATAACAAAGAACA        TCGAAGT-TGAC GTAAG GCCACACTTCGA        ATGCAGATAATGTCA  62 80
JN178_RS18830 4271658 .. 4271668 -  -6.8  -3.57144   CGTGCCACTCTCAAA                 CCCT AAC AGGG                 TAGTTTGCGCAAGTG  65 264
        arfB NONE
JN178_RS18810 4268930 .. 4268951 - -14.5  -5.66684   TAATTCATAAAAAAA           GGCCGTGTT AATT AACACGGCC            TTTCACAAAGTAAGA 100 53
JN178_RS18795 NONE
JN178_RS18790 NONE
JN178_RS18785 4261298 .. 4261310 -  -7.7  -5.08601   TGACGTTAATAAAAA                TAGCG ATA CGCTA                CGTACGCATTGCTGG  89 3
JN178_RS18780 4260868 .. 4260878 -  -3.2  -3.89348   AATTGCATATAACAA                 TGGC ACT ACCA                 TAGCACACCCCTTTT  55 143
JN178_RS18775 4259535 .. 4259547 -  -3.3  -3.14125   GCCAGACACTGAAGA                CGGTG TTT CAACG                TGCAGGCGATTTTGT  46 335
JN178_RS18750 NONE
JN178_RS18745 NONE
JN178_RS18740 4248671 .. 4248683 -  -2.7  -3.52117   TCTACTCAGAAAAAG                TAAGT CGC ACCTA                GGGTGTACTGAATGT  47 3
JN178_RS18735 NONE
JN178_RS18730 4247836 .. 4247857 - -10.1  -2.99719   CTTACAAACAGCACA           GGCAGCGCA AGCA TTCGCTGCC            ATATTTTAGCGTTAG  75 37
JN178_RS18725 NONE
JN178_RS18720 NONE
JN178_RS18715 NONE
JN178_RS18710 NONE
JN178_RS18705 NONE
JN178_RS18700 4239546 .. 4239566 -  -4.7  -3.53444   CTCTTTAACAATTAA            CAGCGAAAA TAG TGTTCGCTA            CATAGTGTTAGTTGT  56 121
JN178_RS18695 NONE
JN178_RS18690 NONE
JN178_RS18685 NONE
JN178_RS18680 4236689 .. 4236713 -  -5.1  -5.52023   ACTAGTAATAAAAAA         GCCCTTGATA TGAGAC TA-CAAGGGC          ATTTTTAAAGGTAGA  85 65
JN178_RS18675 NONE
JN178_RS18670 NONE
JN178_RS18665 4234730 .. 4234742 -  -6.9  -3.05935   ATACGTTTTAGTCAA                CGCGC TTA GCGCA                CAGGCTTGGTAAAGG  62 18
JN178_RS18640 NONE
JN178_RS18635 4227819 .. 4227837 - -14.6  -4.19506   AGCGCAATTGTAAAA             GAGCAGGC TAT GCCTGCTC             TTTTATTAGGTTAGT 100 36
JN178_RS18595 4221139 .. 4221153 -  -7.8  -3.53224   CAGTGTCTTGGCAAA               CGTCGC TTG GCAACG               CGCCGTTATCTATGC  67 333
JN178_RS18575 NONE
        cydB NONE
        cydX NONE
JN178_RS18560 NONE
JN178_RS18555 4210326 .. 4210383 -    -8  -3.35073   AGTATGGGCAATGAA GTGTTTCGCTCTGACGTTGCTTTTAAGA ATGC TCTTAAA-GCAACG-CTAAGTGAAGCAC AGTACCAAGCTCACC  65 398
JN178_RS18535 NONE
JN178_RS18530 4202688 .. 4202716 - -16.1  -5.28942   GAGCGCAAACAAAAA        TGCCGCTTAGTCT TTA AGACTTAGCGGCA        TTTTTTATAGTTTAG 100 61
JN178_RS18505 4192771 .. 4192788 -  -4.1  -3.66646   AATACTTTATGGAAA             CGTCACA CGGT TTTGACG              TGTATTACAACGCAT  53 361
JN178_RS18480 4184584 .. 4184604 -  -7.7  -3.47361   TATAGCGACCAAACA            TTGTCAACA AAG TGTTAACAA            ACTTATTGAGATACG  68 199
JN178_RS18475 NONE
JN178_RS18470 NONE
JN178_RS18465 4181454 .. 4181474 -  -4.7  -3.90588   CACCTCTTAACCAAA            CACCACAAT GAC AGTGTGGTA            AACACCACGCTTATT  61 57
JN178_RS18460 NONE
JN178_RS18455 NONE
JN178_RS18450 4178438 .. 4178459 - -10.1  -3.05463   AGCCCCTTTAGTCAA           TGGCGCATC AGCC GATGCGCCC            CAGTATGTTAGCCTG  76 33
JN178_RS18445 4176806 .. 4176826 -  -2.5  -4.46926   TATTCCATCAGAAAA            CTGAACATG TAC CTTGTTAAG            ACTAGATCAAAAAAC  60 115
JN178_RS18440 4175153 .. 4175172 - -13.6  -4.00532   GGTCTAAATAGCAAA            TAGGCGGG TTGC CCCGCCTA             TTCAAGTTATTCGCC 100 32
        rpsF NONE
        rpsR NONE
        rplI 4171050 .. 4171067 - -12.7  -5.30686   AACAGGCACAAAAAA             GCCGCTC AAAA GAGCGGC              TTTTTCAAATACGTC 100 46
JN178_RS18405 NONE
JN178_RS18400 4166529 .. 4166552 -  -6.6  -3.06915   AGGCACTTTACCTAA          TTTGTGGGGC AACT GCCCCACTTA           AGCGTAAGAAATTAT  60 40
JN178_RS18395 4165273 .. 4165285 -  -2.7  -2.78384   CGCGTTGTGAGCATA                TTCAA TCC CTGAA                TGTAAAGCTGCATTG  42 86
JN178_RS18390 4164588 .. 4164602 - -12.8  -2.55074   TGGAATTGCAAGTGA               GCGCGC CTC GCGCGC               CATGTAACAAGATAT  89 254
JN178_RS18380 NONE
JN178_RS18375 NONE
JN178_RS18370 4161948 .. 4161965 -  -9.9  -5.50723   CGATGAAAAGAAAAA             GCTGCTT AGAG AAGCAGC              TTTATGACTCATTGA 100 106
JN178_RS18365 4161289 .. 4161318 -  -8.1  -3.96681   TCAACAAACGAACAA       CCAGAA-TTATGCT AAA AGCATAAATTCTGA       CTTGATATGGTTTTG  77 51
        dnaB 4159779 .. 4159813 - -13.7  -3.93117   GTAACGAGATAATAA    GAAAAGGCGCCG-CTC TTTC GAGACGGCGCCTTTTT     TGTTTCTGATGTTAA 100 37
        nudC 4155540 .. 4155555 - -10.4  -3.66874   CTAATCTTATTGAAA              CCCTGC TTCG GCAGGG               TTTTTTATTTGTTGC  81 30
        hemE NONE
JN178_RS18320 4153576 .. 4153592 - -12.3  -3.10908   AAACCCAGTAGCTAA              CCTGCTG TCA CAGCAGG              CTGTGAATGTGCAAT  87 5
JN178_RS18310 NONE
        tsaE NONE
JN178_RS18300 4148857 .. 4148876 -    -2  -2.55722   ATATGATTTAATTGA            TACAACGC AATC GCGCCGTC             TTGCACGCAATGCAC  39 98
        mutL NONE
        miaA 4146116 .. 4146134 -  -4.6  -2.66733   GTCTAATGTATACCA             CACTCCAA CAT TTAAAGTG             TGACTTTCGCTGTAA  47 18
         hfq NONE
        hflX NONE
        hflK NONE
        hflC 4142339 .. 4142357 - -10.3   -5.4492   GACAGATACAAAAAA             GCCAGTC ATAAA GACTGGC             TTTTTGAAATTTACG 100 54
JN178_RS18265 4140442 .. 4140465 - -16.8  -6.28401   CAAAAAACAAAAAAA          GGCGGTGGTT ACTC AACCACCGCC           TTTCGCGTGTCACTA 100 55
JN178_RS18260 NONE
JN178_RS18255 NONE
JN178_RS18250 NONE
JN178_RS18245 4135472 .. 4135512 -  -9.8  -2.75074   CCTATTGGAAGAGTA CGCTGCGCAGTAGGTGATC CATT GAGCACCTACTGCA-AGAG  AGTTATTGCGGGGTT  74 28
        ubiG 4134049 .. 4134064 -    -9  -2.64616   TGTCTATTGACATGA              GGTCTG TGGT CAGACC               TTTGTTATAATTATG  67 231
JN178_RS18230 NONE
JN178_RS18225 4132052 .. 4132072 -  -2.5  -3.67296   GAGTAGGCATTCAAA            TCACTCTGC TTA ACAGTATGA            CTATTCAGCGCTTTT  49 69
JN178_RS18220 NONE
JN178_RS18215 4130661 .. 4130695 -  -6.6  -3.05844   GCCTGCAGTGTAATA    CAAAGCGTGCATTTA AAAAAG TACA-GCACGCTTTG     TTTAATGTTCTAGCG  60 35
JN178_RS18210 4128555 .. 4128595 - -17.9  -5.46657   TAGCTCAATAAAAAA  GGCCATTTAACAACGTATA TTT CATAAGTTGTTAAATGGCC  CTAACGTGTTTTATT 100 49
JN178_RS18200 4126658 .. 4126677 -  -5.6  -3.53343   AATGTTGGCGCCAAA            GCGCAGTCC ATA GG-CAGCGC            CAACTTACCTTTATT  57 82
JN178_RS18190 4124296 .. 4124317 -  -3.5  -4.14392   CGTTAACGCTTAAAA           CCTGCGGGC TTTA ACCTGCGGG            CTTTTGCCTTTGCGC  57 58
JN178_RS18175 4119035 .. 4119045 -  -2.6  -3.16564   CTTCTACTTCATCAA                 TTAA CGT TTAA                 ACGTCATTTACTTAC  44 33
        pdeM 4118174 .. 4118202 - -12.5  -4.99638   ACAGCTAGAGAAAAA        GCGGCACAAAACT AAA AGGTTTGTACCGC        TTTTTTTATGCTTGA 100 131
        folE 4114493 .. 4114510 - -12.7  -4.87291   GACGTTAAGTAAAAA             GCCGCTC AATT GAGCGGC              TTTTTTATGTTCGTG 100 42
JN178_RS18135 4110458 .. 4110504 - -16.1   -3.4072   TAGTTGGTAGCACAA TCTTTTGCTGTAGCGCAAAAC CCGTC GTTTTGCGCCACAGCAAAATT GATTTAATGGTACTC 100 29
JN178_RS18130 4109086 .. 4109121 -  -3.3  -4.05446   TTTGGGAAGCACAAA    TCTATCGCGTATTGA GGCGAG TCAACGCGCAATGGA     TGTAACGCTAACCCG  57 486
JN178_RS18115 4107515 .. 4107549 -  -2.6  -3.55548   CAATACGTGTTTAAA     CGGCGGGTTCGCGCAA TAA TAGCACAAGCCATCCG     TTAACGTTACATTGA  49 32
        pyrC NONE
JN178_RS18105 NONE
        dbpA NONE
JN178_RS18095 4103323 .. 4103334 -  -4.4  -3.02144   CTACGTTGCGCAATA                CTTG CTTA CAAG                 AGGACTTATTGGGGC  49 31
JN178_RS18080 4099241 .. 4099254 -  -3.7  -4.21631   AATCGACTTAAGAAA               CGACC GGTT GGGCG                ATCAGGTGTTACTAG  62 435
JN178_RS18070 4094867 .. 4094878 -  -5.8  -2.83403   CTTTTCTTAGGAAAG                TGCG GTAT CGCA                 AGGGAGGGACGCGTA  54 116
JN178_RS18065 4094667 .. 4094685 -  -2.4  -2.82834   GATCCTAGCACTACA            GCGTCGT TGTCTT ACG-CGC             TCAAAGAGGGCGCAA  41 65
        secE NONE
        nusG 4093676 .. 4093690 -  -7.1  -5.76633   TCACATATAAAAAAA               GACGG ATAAA CCGTC               TTTTTTTAAATACTT 100 49
JN178_RS18050 4090770 .. 4090800 - -11.3  -2.62735   ACAGGTCGCACAGTA      CATAGGGTGCTTCA ATAG CGA-GCACCCTATG       TGTGTTTATTTTAGC  78 36
        rplK NONE
        rplA 4089083 .. 4089108 -  -8.3  -3.09135   ATAACCTTTAAGAGA         TTCCATCGAGC TTTC GCTCAAAGGAA          TTAAAGACCTACAGA  68 26
        rplJ 4088271 .. 4088302 -  -8.8   -2.7407   TAAAAAAATCAATAT      GCCAAAAACGCCAA TTAC TTGGTGTCTTTGAC       CGCCGCCAATACGCG  68 8
        rplL 4087789 .. 4087815 - -17.4  -4.65838   TATACAGCGCAAAAA         GGCTGGTGGTTC AAA AAACCACCAGCC         TTGCCGTCTCAGGCA 100 60
        rpoB 4083480 .. 4083495 -  -2.4   -2.8055   CATCTCATAACATTA              CGCGGC GATT GCCGTA               TTACTTTTCTTCAAG  41 26
        rpoC 4078962 .. 4078980 - -11.8  -4.45077   TAAAAACTACGAAAA             CCCAATCA CTA TGATTGGG             TCCTATTTATGCGAC 100 287
        rpsL NONE
        rpsG 4078005 .. 4078019 -  -6.4  -3.96216   CTCTCAGTTAAATAA               CGTTGA TTA CCAACG               GTAGTGAGCAAACGC  69 17
        fusA 4075841 .. 4075864 -  -7.4  -4.27316   TTTCCTAAGTTAAAA          GTCCGACCCA CAAA TAGACCGGAC           CGAACCTTCATTTAG  76 42
         tuf 4074588 .. 4074603 - -10.4  -5.68039   AAAGGCATAAAAAAA              GCGCAC CTAA GTGCGC               TTTTTTGGGCTTATG 100 55
JN178_RS17990 4072971 .. 4073005 - -11.6  -4.27694   TTAAGTAATAAATAA     GCAGACACAATAAAAG TTA CTCCTATTATGCCTGC     CACTTCAAAAAGCAA  93 49
JN178_RS17980 4070455 .. 4070473 -  -4.6  -4.78753   TCAACATCAAGAAAA             CCTTCTTT ACG AAACAAGG             AAAGGGTTTTTGGCC  71 124
JN178_RS17975 NONE
JN178_RS17970 NONE
JN178_RS17965 4067992 .. 4068002 -  -2.4  -3.19293   AAGGCGAAGACTCAA                 GGGC TAG GCTC                 CTTGTCTATTTTGCA  43 18
JN178_RS17960 NONE
JN178_RS17955 NONE
JN178_RS17950 NONE
JN178_RS17945 NONE
JN178_RS17940 NONE
JN178_RS17935 NONE
JN178_RS17930 4061710 .. 4061722 -  -4.8  -4.64992   TTCAAAAAAGAGAAA                CCAC AGTAG GTGG                TAGTGATAGCGACTC  73 137
JN178_RS17920 4059830 .. 4059849 -   -15  -5.71712   CTTCATATAAAAAAA            GCCAGCGC AGAT GCGCTGGC             CGAATGTTGACTTTC 100 91
JN178_RS17915 4058511 .. 4058532 -  -3.7    -4.258   GCACTGAGCAATAAA           GTGGTACAA GAAC TTGCAGCAC            ATTACCCGCAACACG  62 27
JN178_RS17910 4057283 .. 4057295 -  -3.4  -4.15222   ATTGTCCTTAATAAA                TACC GACAG GGTA                GTCACTTACCCATCG  57 59
JN178_RS17905 4055954 .. 4055979 -  -4.7  -3.28119   ACGCATTGACACTAA         GTGCCCGCT ACGACCTG AGCGAACAC          ATGGCTGTTACTGGG  52 142
        pdsO 4046885 .. 4046910 - -12.7  -3.93742   GCGACAGAAATAGAA         TCGTCACCCAA AACC TTAGGTGACGA          TGTGCTAGCGAAAGG 100 103
JN178_RS17860 NONE
JN178_RS17855 NONE
JN178_RS17850 4043570 .. 4043611 -  -5.9  -3.52192   GCGAATGTGAGACAA GCACAACAACGACACTAAA TGCA TTGAGTTACATTGTTGCGC  TATCTACCGCCAAAC  60 59
        panP 4040790 .. 4040816 -  -3.7  -5.38047   TATGTATACAAAAAA        GCCCGC-ACA ACAATTAG CGTAGCGGGC         TTTTTTATTTTTTGG  79 51
        pepB 4033293 .. 4033314 - -13.1  -5.28315   ATAAAATTGAAAAAA           GGCACAATC CTGC GATTGTGCC            TTTTTCATTACTGTG 100 56
JN178_RS17790 NONE
JN178_RS17785 4031496 .. 4031509 -  -8.1  -5.22137   AATTACAAAAGAAAA               GCGCA CAAA TGCGC                TAGTCTACATGCTGA  91 67
        ftsY NONE
        ftsE NONE
        ftsX 4027563 .. 4027577 - -11.4  -4.89729   TATAAAACGGAAAAA               GGCCCT ACA AGGGCC               TTTTTTAATTACGCT 100 96
        rpoH 4023484 .. 4023498 -  -8.5  -5.62045   ACAGATAATAAAAAA               GCGCC GTTCA GGCGC               TTTTTTGTATCTCTA 100 49
JN178_RS17730 NONE
JN178_RS17725 4019863 .. 4019878 - -10.4  -5.64274   TTACGCACAAAAAAA              GGGAGC TACT GCTCCC               TTTCCACATAGATCT 100 45
        metJ 4017373 .. 4017393 - -15.5  -5.08601   GTACTCTAATAAAAA            CGGCGCTTA TCT TAAGCGCCG            TTTTTATTATCTATG 100 64
JN178_RS17700 4015338 .. 4015352 -  -8.5  -5.22312   ATCGATATTAAAAAA               GCGCC TATAT GGCGC               TTTTTTATTGCCTAG 100 44
        priA 4012620 .. 4012636 -  -3.7  -3.52668   AAGTTAGCTATACAA              GCGAT GCGCACT ATCGC              TGATAAAAATTCTAT  51 60
JN178_RS17685 NONE
JN178_RS17680 4010641 .. 4010651 -  -5.4  -3.49475   GCCACCTTCAGATAA                 TCTC GAC GAGA                 TTTTTGTAGGAAAGC  57 466
        hslV 4007929 .. 4007940 -  -2.2  -4.10566   AGTTAATAACAAGAA                TGCG AGCG CACA                 CAGCAGATAACGACA  54 69
        hslU 4006498 .. 4006532 - -16.6  -3.48924   GTATCCGCTATAGAA     TTGTGAAAGCCCAGCA TGA CGCTGGGCTTTCAAAA     TATACAAAACGCGAA 100 41
JN178_RS17650 NONE
JN178_RS17645 NONE
JN178_RS17640 4003311 .. 4003327 - -10.9  -2.52896   GTACTTTCTAACCTA              CGCACAA AGA TTGTGCG              TTGCGGCATCTCATC  78 410
JN178_RS17635 4001376 .. 4001395 - -12.2  -4.84527   TTCACACACGAAAAA            GGGCCTTT ATTT AAAGGCCC             TTTTAAACAGCTAGG 100 57
JN178_RS17620 3994846 .. 3994877 -    -8  -3.38036   TCAATTAAACCAATA      CGTAGGAATGAGCA GTAT TGCTGACTCCTTCG       ATGCTATAACCGCCG  65 447
        prlC NONE
JN178_RS17580 3984749 .. 3984788 -  -7.3  -3.12668   CTTTAAACCCCAAGA  CAGCATTAATCGAGCAA GTTAGT TTACTCGATTATTGGTG   CCCCAACTAAATGCA  62 4
        ubiE NONE
JN178_RS17570 NONE
        ubiB 3981431 .. 3981441 -    -4  -4.36206   ACAACTTACAACAAA                 TTAC CGG GTAA                 CTCGAGTGGTTTAAC  62 185
JN178_RS17560 3981066 .. 3981085 -   -15  -5.50774   GATAAGAAAGAAAAA            CGGCGGTC AATT GACCGCCG             TTTTTGAATTCTTAG 100 37
JN178_RS17555 NONE
JN178_RS17550 NONE
JN178_RS17545 3977878 .. 3977890 -  -2.7  -3.27744   AAAAGAAATCCAAGA                TATTC GCA GAACA                GCACGTTGAAGACCA  46 119
JN178_RS17520 NONE
JN178_RS17515 3971479 .. 3971495 -  -2.3  -2.79492   GGTTTAATCTCAAAG              TTTTGAT TCA ATCAGAA              GTTCGGCAAAGAAAT  41 3
JN178_RS17510 NONE
JN178_RS17505 3969650 .. 3969674 -  -5.8  -3.29269   GAAAATAGATGAATA          CGCGTTTT TGAAGGATT AAAACGCG          CATTTAAAGACTTAA  58 37
JN178_RS17500 3968136 .. 3968179 -  -4.6   -5.7946   GGTTGAACAAAAAAA GTTAACTTTGCCCCATTAGG TATG CCAAATGAAACAAAGGTATC ACAAACCATACGAAG  90 126
JN178_RS17495 3966930 .. 3966950 -  -5.3  -2.78725   ATAGGCGATGAAGTA            CTACGCTGC GTG GCAGCACTG            CTTGAACATGGTAGC  49 433
JN178_RS17475 3962185 .. 3962204 -  -5.8  -2.73875   TTTTTTTGAATAGCA            TTAAAACC TTAT GGCTTTAA             TGTTATCGAAGGCGC  54 28
JN178_RS17470 3959282 .. 3959306 -  -4.2  -3.91412   ACCATATCGCACAAA          GCACTATGGG CAGCC CCCAAAACGC          CAAAAGCTGAGCCCA  59 66
JN178_RS17465 3958828 .. 3958851 -  -8.9  -2.54702   ATAGATCGTAACTTA          CGCACCACA TATATT TGTGATGCG           TGAGCATCTTTAAAA  67 73
JN178_RS17460 NONE
JN178_RS17455 3956606 .. 3956620 -  -3.5  -3.95153   GCAATCATCGATAAA               CGAGT TTATT ACCCG               TCGCGTTCACCTCAC  55 129
JN178_RS17450 3955593 .. 3955611 -  -3.1  -4.46587   GCAGCAAGAAAACAA             TCAATCG CTAGT CGCTTGA             TTTATCCACGCTGGC  62 27
JN178_RS17415 3948423 .. 3948436 -  -3.1  -3.72893   CAGGGGCGTATTAAA               CCAAC TTGC ATTGG                AACCTACCCAGTTGG  53 140
JN178_RS17410 3947634 .. 3947647 -  -2.3  -3.28001   TACGGGTAAACGCAA               GCGTT AGAA AGCGC                GTAGAATTCGCTGTT  45 39
JN178_RS17395 3944020 .. 3944047 -  -7.8  -3.54475   TTTGTGAGTAGATAA        GCCGTCACCTG TTTTATT CAG-TGACGGC        TTTTTTATACACGCT  68 67
         rnr NONE
        rlmB 3938861 .. 3938880 - -10.7  -2.90349   TCGCTAAACGCAAAC            GCGCGGA TCAAAG TCCGCGC             TGTCTAACGATTTCG  77 13
JN178_RS17375 3936554 .. 3936569 - -10.4  -6.34616   TGAAAACAAAAAAAA              GCCTGC ATAA GCAGGC               TTAAAAGGGAGACGT 100 48
JN178_RS17370 3934843 .. 3934868 - -11.1   -5.2112   AACACCATTAAAAAA         GGGCCAGACAC TTAC GCGCCTAGCCC          TTTAAAGTTAAGTTA 100 99
JN178_RS17365 3932659 .. 3932679 - -13.3   -5.5112   GTGACCAATAAAAAA            GCCCCAACT AAA AGTCGGGGC            CAATAACCACGTCAC 100 47
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR 3929595 .. 3929605 -  -3.2  -3.35774   TATAAACTCCTAGAA                 CTGA AGA CCAG                 CTTCGCGAGCTGCAT  48 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 3926911 .. 3926941 - -15.6  -2.61117   CTACAAAGCAAAACT       GCAGAACCTGATAA GTA TTGTCAGGTTCTGC       TTACAGTCTTGCCAA 100 59
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 3923897 .. 3923922 - -19.1  -5.84432   TAGAACATAAAAAAA         GGGGCCTGAGT TCTC ACTCAGGCCCC          TTTTTCTAATCGAGT 100 46
JN178_RS17275 NONE
JN178_RS17270 NONE
JN178_RS17265 NONE
        wecB NONE
        wecC 3917129 .. 3917156 -  -9.8  -5.38249   AGGAACTACAAAAAA        GCCGACAAAACG AGAA CGTCTAGCCGGC         TTTGAGATATCATGC 100 45
JN178_RS17250 NONE
JN178_RS17245 NONE
JN178_RS17240 NONE
JN178_RS17235 NONE
JN178_RS17230 3908103 .. 3908114 -  -4.4  -3.33261   TGTCAACTTGTAGAA                TGAC ATTA GTCA                 CTGAATGCCTTTTCT  52 19
JN178_RS17225 3907245 .. 3907255 -    -4   -4.4078   CGCTGCTAATTAAAA                 TCAA GTT TTGA                 AACAATTGAATCATT  64 5
JN178_RS17220 3904628 .. 3904649 -  -3.8  -3.26839   AAATTCCAAAAATTA           TGGTTAAC AGTAAA ATTAACCA            ACCACCTGTGTTCTC  49 19
JN178_RS17215 3903235 .. 3903250 -  -2.6  -3.05268   TAATGATCGCTAATA              TATACA AATA TGCATA               CTAAAAATTAAAAAC  43 266
JN178_RS17210 3901775 .. 3901787 -  -6.3  -3.61715   CAGTTGTTTCAACAA                TGACT GGC AGTCA                AAGCCATGCCGAATA  62 273
JN178_RS17205 3898632 .. 3898656 -  -2.8  -4.68908   TCTAGTTAAAATAAA          CGAAACTGTA TTCTC TACCGATTCG          ACATATCCTTTTTCG  62 127
JN178_RS17200 3895356 .. 3895369 -  -5.3  -3.60309   GATGAGAAAGAAAAG               TCACA TTAT TGTGA                GGAAAACTTTGCGAG  59 323
JN178_RS17195 3894695 .. 3894706 -  -2.2   -4.2123   TACTGATTGAATAAA                CTGC CACT ACAG                 TTCCTTTCTATAACA  57 43
JN178_RS17190 3893139 .. 3893169 -  -4.9  -2.89511   TCACACAAGTTAAAC      GCTC-TATAGCAAA TTGC CTTACTATAAGAGC       TAGTCTGCGCCGAGC  51 241
        rfbA 3892114 .. 3892128 - -11.4  -4.55093   TGAGATAAGAAGAAA               GGTGGC AAT GCCACC               TTTTTAAATTTGAAC 100 46
        rfbC NONE
        rfbD NONE
        rfbB 3889442 .. 3889461 - -10.7  -5.55664   TGATTAGCAAAAAAA            CCACCGC TAACAG GCGGTGG             CTTTAGTGTATCATT 100 57
JN178_RS17165 3887717 .. 3887729 -  -4.1  -2.54098   GGTTGCAAGTAACAT                GCATC AAT AATGC                CTAATCTATCTTGCA  44 31
JN178_RS17160 3886344 .. 3886369 - -14.1  -5.08483   TAAAAGCAAAGAAAA         GTGGGTAGAGA GGCC CCTCTACCCAC          CAATGCGTTAGTCAG 100 33
JN178_RS17155 3885437 .. 3885464 -  -9.2  -3.14013   CAATCACAGGCAAGA        GCCGCGCTGACTA CAC TA-TCAGCGAGGC        CATTGTTGCCGAAGC  70 62
JN178_RS17145 NONE
JN178_RS17140 3881701 .. 3881719 -    -3  -2.79183   TTCACTTTCACTACA             TCCACTAC CAT GTAGAGGC             TCCTGCACTAGCACC  42 11
JN178_RS17135 3880116 .. 3880161 -  -5.5  -3.65522   GAGTCATCTCAACAA CGCGAACAAGTTATGCGTATAT TAA ACAC-CGCACAACATGCTGGCG TGTCTCATGACAAAC  59 133
JN178_RS17125 3877081 .. 3877117 -  -6.2   -3.6849   AGCTAATCGGAAGAA   TTGCCTTGCTATCAAATC ATC GAT-TGATAACAA-GCAA   TTCAGTCAAGTAGAG  62 192
JN178_RS17120 3874105 .. 3874132 -  -4.2  -3.29144   TTAGCTTGTCTACAA        CACTCAA-AAGCT TAA AGCTTCTTGGGCG        TTGTATGGTTAAGCC  52 30
         rrf 3873849 .. 3873870 - -14.5  -5.77988   ACATACACAAAAAAA           GCCCTTGTC TAAC GACAAGGGC            TTTTTGGAATTGGGA 100 40
JN178_RS17110 NONE
        murB NONE
        birA NONE
JN178_RS17095 NONE
JN178_RS17090 NONE
JN178_RS17085 NONE
JN178_RS17080 NONE
JN178_RS17075 NONE
         tuf 3867246 .. 3867261 - -10.4  -5.68039   AAAGGCATAAAAAAA              GCGCAC CTAA GTGCGC               TTTTTTGGGCTTATG 100 55
JN178_RS17065 3864161 .. 3864175 -  -2.8  -4.17316   ATGTTGGTAAAAGAA               GTGTTT TCC AAACGC               ACTGGCCGCAAGGCC  55 159
JN178_RS17055 3862562 .. 3862574 -  -3.4  -3.96298   GACTCAGTAACTAAA                TCAC CTCGT GTGA                AAGGCAATATACTTC  55 88
JN178_RS17050 NONE
JN178_RS17045 3860158 .. 3860177 -   -10  -5.02502   CATATTACACAAAAA            TGACGAGC CTAA GCTCGCCA             TTTTGAAGGTTAAGA  93 61
JN178_RS17040 3858919 .. 3858934 - -11.8   -5.4833   GTATGGAATAAAAAA              CGGCGC ACAT GCGCCG               TTTTTTTTGTTTTTA 100 38
         acs NONE
JN178_RS17025 3854644 .. 3854656 -  -6.3   -3.9392   GCCGATTTCAAACAA                TGTTG ACA CAACA                GCCAGGTTACCAACA  66 233
JN178_RS17000 3850475 .. 3850492 - -11.3  -3.10082   AAAAATGTGAGTTAA             GGGCGAT ATTC ATCGCCC              ATAGCAGCATGAATA  80 43
JN178_RS16990 NONE
JN178_RS16985 3844735 .. 3844764 - -11.5  -5.63517   GTGTGAAACAAAAAA       CCAACCCACTCAC ACGC GTCAGTAGGTTGG        CAATATTGTTTTTTC 100 54
JN178_RS16980 NONE
JN178_RS16975 3841865 .. 3841881 -  -7.9  -3.53224   TATGTTCCGGGTAAA              GTGAGCG AGT CGCTCTC              TCATGACAGCTTTGT  67 297
JN178_RS16965 3840154 .. 3840168 -  -5.6   -3.1505   ATTACTTCCCATCAA               CTACCC ATA GGGTTG               TTAACCCAGATGGTG  54 230
JN178_RS16935 3831782 .. 3831810 -  -6.7  -5.00616   TTTGGGCTTAAAAAA        GTGCCACCCCC GATTAAG GAAAGTGGCAC        CTAACACTACAATTG  81 56
JN178_RS16930 3830920 .. 3830948 - -10.2  -4.87626   GTCGAATAGCAAAAA        GCCGCGAGGCCT TGTGG AGGGTTCGCGGC        TTTTTTGCATCTAAT  93 48
         mdh 3829164 .. 3829202 - -18.3  -3.28712   GCGGGGGTTTGATAA  GTAGGCT-CTCCACCGCA AGGA TGCGGTGGCGAAGCCTAC   AGGGAAGTATTCACG 100 81
JN178_RS16910 3826473 .. 3826497 -  -9.9  -4.61566   CTGTAAATCATAAAA          GCCCGCTTCTT AAC ACGTAGCGGGC          TTTTTTATTGCGTTA  89 38
JN178_RS16900 3822939 .. 3822958 - -11.4  -3.14211   ACGCTCTTGTATGAA            GGAGCGCC GGGC GGCACTCC             CTCAAAGGCGAACTA  83 38
JN178_RS16895 3821482 .. 3821499 -  -8.4  -5.95946   CCAAGAACAAAAAAA             GCCGTC ATATCA GACGGC              TTCAGTACAAATCAG 100 58
JN178_RS16890 NONE
JN178_RS16885 NONE
JN178_RS16880 NONE
JN178_RS16875 NONE
        nqrE NONE
        nqrF 3815172 .. 3815185 -  -9.5   -5.4756   AACTTGAATAAAAAA               GGGGC TTGC GCCCC                TTTTAAATATTCTTA 100 63
JN178_RS16860 3814063 .. 3814080 -  -2.7  -2.71731   GCTACCCCCTAATTA             TGAACTG TCAC CAGTTTA              TCAAATTCTGGCGAT  41 1
        nqrM 3813756 .. 3813781 - -10.5  -5.21709   GTCGAGATCAAAAAA         GCGCCGTTTAA AACA TCAAACAGCGC          TTTTAAATAGTAGTT 100 57
        dinB NONE
JN178_RS16845 3812191 .. 3812214 -  -7.6  -2.62735   AGACCTTCTACACTA          TGACCTAATT TCAA AATTAGATCA           TTTTTTCGTCATTAG  62 18
JN178_RS16840 3810753 .. 3810773 - -11.2  -3.70104   AAGTAGCGAAGACAA            CGCTCTTC CTATT GAAGAGCG            TCAGCATATAGGCTT  87 510
JN178_RS16825 NONE
JN178_RS16820 3808519 .. 3808538 -  -6.4  -2.58861   TATTAGCCCGATAAC            CAAGAGCA CTAT TGCACTTG             CTACCGCTACGCCTG  56 282
JN178_RS16805 3805957 .. 3805971 -  -2.8  -3.53779   TCCCCAAAACAGCAA               TGCC AATAAAG GGCA               GCAAAGACGGTAACC  48 445
JN178_RS16795 3804744 .. 3804792 -  -5.4  -4.04806   GGTTATATGAAATAA TGCGTGTTGCACTTTGCA TTTCGCTTTGTTC AGCAAAGCTCAACACGCA CTCTGTAATATCGGC  65 48
JN178_RS16770 NONE
JN178_RS16765 3796385 .. 3796401 - -10.8  -4.83269   AGATCACACTAAAAA              GCGGGC ATGTA GCCCGC              TTTTTTATTATTCGA  91 51
JN178_RS16750 3791387 .. 3791404 -  -3.4  -2.64679   ACTAACTTCAAATAC             GCGGTA CTATTC TACCAC              TTTTGCAGAGACATC  43 19
JN178_RS16745 NONE
JN178_RS16740 3790008 .. 3790040 - -14.1  -2.91144   TGAGGGTGGAAAGGA      CCGCGCCCCTCGCCT TTA AAGCGAGGGGCAAAG      GCGATGATTATTTGT  95 33
JN178_RS16735 NONE
        bcsA NONE
JN178_RS16725 3784765 .. 3784778 -  -2.3  -3.24976   AACCCGTGAAATATA               CGCTT TACC ATGCG                TCTTGCACTTGTTTG  45 16
JN178_RS16720 3783644 .. 3783654 -  -3.2  -2.53343   ACACTCATTAGTAAC                 GCAG TCG CTAC                 ACTGATATACAAAAC  43 55
JN178_RS16715 3781234 .. 3781261 -  -8.5  -4.52703   CAAATTACTATAAAA        CGCGGAGTT GATTAACGAA AACTCCGCG         TTTTTTGTTTGTATC  86 52
JN178_RS16685 3774635 .. 3774652 -  -9.9  -5.42514   TCACAAATTAAAAAA             GGGTTGT ACTA ACAACCC              TTTTTTTTATCCGAC 100 53
JN178_RS16675 NONE
JN178_RS16670 NONE
JN178_RS16665 3771001 .. 3771019 - -14.6  -5.52096   AAATGCAATAAAAAA             GGCGACTC ACT GAGTCGCC             TTTCTTCACGTTTAT 100 57
JN178_RS16650 3768577 .. 3768594 -  -8.4  -5.66684   TAAGGCACAAAAAAA             CCGGCT TAGTGT AGCCGG              TTTTTTTATTTAACT 100 54
        fghA 3764270 .. 3764280 -  -5.4  -3.70108   AACTTGAAAACAACA                 CTGA CGA TCAG                 GCTATTGTGCAAGCC  59 203
        dusA 3758054 .. 3758068 -  -4.4  -4.17048   GTTGTTTTAAAAGAA               TTTATT AAA AATAAA               ATTGCCAGCGAGAGA  61 90
JN178_RS16600 3757620 .. 3757633 -  -9.5  -5.47218   CTGGACGTAAAAAAA               GCGCC CTAA GGCGC                TTTTTTACAACAATG 100 44
        pspA NONE
JN178_RS16585 NONE
JN178_RS16580 3754573 .. 3754600 - -11.4  -2.90496   CTTCCTTTTAAATGA        CATATAGCCGGC GTTC ACCAGCTATATG         ATTTTTTACTCTACC  82 125
JN178_RS16575 NONE
JN178_RS16570 3752745 .. 3752770 - -12.7  -5.65927   TATTGAAATAAAAAA         GGCGTGAACTGA AAC TCAGT-CACGCC         TTATCACTATTTGGC 100 50
JN178_RS16565 NONE
        cysI NONE
JN178_RS16555 3748269 .. 3748317 -  -5.5  -3.05596   TACCCTTGTAGGTAA GTCGCCCAATGAACCGTATTTAG CGGCC CTAAAAACAGTTC-T-GGGCGAA GTATTCAGTATTGCC  54 55
JN178_RS16545 3744661 .. 3744673 -  -5.5  -4.82678   CCATAAAAATGAAAA                GCCGT TCG ACGAC                TTAAGCGGTGAGCGT  76 418
JN178_RS16535 3744026 .. 3744044 -  -9.5  -5.30686   AACAGGCACAAAAAA             GCCGGCA TCAAG CGCCGGC             TTTGAGCTAACTATA 100 44
        fabR 3737904 .. 3737921 -  -9.1  -3.93597   AAAAAGTATACTAAA             GAGGCCA AAAG CGGCCTC              TTTTACATTAGAGAA  79 89
JN178_RS16500 3735211 .. 3735229 - -11.7  -5.05113   TTGATATAAACAAAA             GCCCGGA CTCGT TCCGGGC             TTTTTTATATTTACA 100 53
JN178_RS16490 NONE
JN178_RS16485 3732512 .. 3732526 -    -5  -3.32844   GCCTTCAGTCTACAA               CCTGAA GCT TTCAAG               CTCAGATTTTCAAGT  54 44
JN178_RS16480 3732268 .. 3732308 -  -8.5  -5.21709   CCTTAGAGTAAAAAA  CCCTAATCAATGCTTACTG AAA CAGTAAATATTCATTAGGA  TTCAACTTCCGTTTT 100 141
JN178_RS16475 NONE
         rrf 3728863 .. 3728878 - -11.8  -5.42514   TCATAAAGCAAAAAA              CCCGCC GTAA GGCGGG               TTTCTTTAATTAGGA 100 40
JN178_RS16455 NONE
JN178_RS16420 3715541 .. 3715551 -  -5.4  -4.20368   TTAGTTCAACACAAA                 GTAG GGG CTAC                 TTTCCCCAGCCAATT  67 217
JN178_RS16405 3710716 .. 3710746 -  -3.2  -3.57561   TTTTAAGTTTTCAAA      GGTGCGAAGGGCC GATTGT GGT-CTACGCACC       TTTATTTTCTACGAC  51 34
        katG 3707231 .. 3707246 - -11.8  -5.47159   GTGGAAGATAAAAAA              CGGGGC TTTT GCCCCG               TTTTGCGTTTATTGT 100 78
JN178_RS16390 3706535 .. 3706563 -  -6.8  -3.07291   AACTACTGTACTGAA       TGTCGCGCTAGCT TAAA ACCTAGCGCGA-A        GCGTATCCCATTCCC  60 9
JN178_RS16380 3703218 .. 3703240 -  -8.4  -3.70469   AATGACAATGGGAAA           GCTGACGC CCAAGTC GCGCCAGC           TTTGCGTCATTATCA  72 82
JN178_RS16350 3694696 .. 3694713 - -12.7  -3.56099   CATAACTGTGTTAAA             GGCCGAG AGAA CTCGGCC              TGCTTCTTGTTACAT  95 35
JN178_RS16345 NONE
JN178_RS16340 NONE
JN178_RS16335 3693068 .. 3693085 -  -5.5  -3.63627   GCTTTACAGTGGAAA             GCGCTTA AGCC TTAGCGC              GCCAAACTCCTTTTT  59 12
         dld 3690294 .. 3690308 -   -10  -5.61881   TCTTAAAAACAAAAA               GCCAAC AAT GTTGGC               TTTTTTTGTGTGCGC 100 69
JN178_RS16310 3686811 .. 3686840 - -16.7  -2.59102   TAATAATAAGAAATG       TAACAGCGTTAAG GGAA CTTAACGCTGTTA        TTCCTTTTCTTACTT 100 57
JN178_RS16295 3683718 .. 3683737 - -10.7  -2.75997   TTCGTATAAATCAAT            GCGCGCT CACTAC AGCGCGC             GCTTCCATACCATTT  76 15
JN178_RS16290 3682391 .. 3682405 -  -7.8  -2.81535   TAGCGAAATATAGTA               GCGAGC TAT ACTCGC               GAACTGTCGCCCTTT  62 41
JN178_RS16265 NONE
JN178_RS16260 3674296 .. 3674307 -  -2.2  -3.28712   GTTGTTCTCCTACAA                CGTA GCTT CACG                 TGGTTAAAACAGGTT  45 21
JN178_RS16255 NONE
JN178_RS16250 3672059 .. 3672072 -  -8.1  -4.08974   ACTCCAGTATAGAAA               CGGTC TCGG GACCG                AATAGTCACTACACT  79 185
JN178_RS16245 NONE
JN178_RS16240 NONE
JN178_RS16235 3669769 .. 3669798 -  -2.9  -3.10354   GATATCGATTGAATA       TGCGTTGTTAAGCG GTG CGC-CAAAAACACA       ACGTATTAAAACCAA  44 3
JN178_RS16230 3668412 .. 3668433 -  -8.7   -2.6462   GACTCACCCAAAGAG           GAAGCGCAA AAGT TAGCGCTTC            AACTTATGGCGCGCT  63 210
JN178_RS16200 NONE
JN178_RS16195 3658212 .. 3658233 -  -8.7  -3.01785   TTTTAAAATACGACA           TTTGGGTGC TCAC GCACCCAGA            CCTTCATCATCAGTC  66 163
JN178_RS16185 3656506 .. 3656547 - -13.3  -2.64099   CTTTTGCATGACAAC GTGCTTAGCACATCTGAATA ACC TGTTCAGATGTGCTAAAC-C TCAATGTGCGAACCT  91 80
JN178_RS16170 3650845 .. 3650861 - -12.3   -4.9445   AGAATTAAGTAAAAA              CCGACAC ATG GTGTCGG              TTTTTTTATGCCCTA 100 38
JN178_RS16150 NONE
JN178_RS16145 3642678 .. 3642690 -  -4.1  -4.70659   GTGTAGATTTAAAAA                GTAAC GAC GCTAC                CTTATGTCTATTGTC  69 497
JN178_RS16095 3630422 .. 3630435 -  -3.9   -3.1247   AGTCCCCATAGCCAA               TTCAA TGTG TTGAA                GGCATAAGCCAAAAG  48 224
JN178_RS16080 NONE
JN178_RS16075 3624972 .. 3624995 -  -5.3  -3.56643   GCTACAGCTTTCAAA          CTCACCAAGC ATTAA GCTCGG-GAG          TCACAAACTAACAAT  59 13
JN178_RS16070 NONE
JN178_RS16065 NONE
JN178_RS16060 3621392 .. 3621418 -  -3.8  -4.75472   GCTAGATGAATAAAA         GCGGATAA GGCTATTTTTG TTATCCGC         TTTCTACTCGCTATT  68 36
JN178_RS16055 NONE
JN178_RS16050 3620437 .. 3620466 -  -9.3  -4.84033   AGACAAAAAGGAAAA       GGGACGACACAAA TCAT TCTGTACCGCCCC        ATCTTCGCAACATCT  90 45
JN178_RS16035 3617745 .. 3617762 -  -2.1  -4.18934   CAGTAGTGCAATAAA             TTGCGATT AGA AATC-CAA             GCACAGTGACATGGA  54 91
JN178_RS16030 3616489 .. 3616503 -  -4.4  -4.86033   AAATTTTTATAAAAA               TTATAA ATT TTATAA               AATAAGTGTTTTAAT  73 20
JN178_RS16025 NONE
JN178_RS16020 3614804 .. 3614816 -  -4.9  -3.52192   GTGAAGTGGACAGAA                TTTCA CCC TGAAA                TTCCCCCTTTTAAAT  56 510
JN178_RS16010 3612213 .. 3612237 -  -3.5  -3.49077   CGTAGAAAAACTGAA          CGCGTTCTAAG TCA CTCATAATGCG          CTACTCTACTCCTAA  49 26
JN178_RS16005 NONE
JN178_RS16000 NONE
JN178_RS15995 3609443 .. 3609457 -  -3.6  -2.96866   AAGAAAATAATACGA               GTAAAT CTA ACTTAC               TTTCATCGAAGAAGT  47 102
JN178_RS15990 3608841 .. 3608863 -  -3.5  -3.15008   CCGCATAATAAACCA          TCTTCC-GTG ATTT CACAGGAAAA           GTAAAATACCTGCTT  46 188
JN178_RS15985 3607823 .. 3607839 -  -3.7  -3.59979   GTTGCTCAGTTTAAA              GAAGC TGGTTTT GCTTC              TAATTCCTTTATAGA  53 186
JN178_RS15980 NONE
JN178_RS15975 3604346 .. 3604372 -    -3  -3.60296   GATCTTTACTTGAAA         GACACGATCA AATCAAA CAACCGTGTC         CGTCAATTCTGTACC  50 489
JN178_RS15915 NONE
JN178_RS15910 3590782 .. 3590806 -  -6.5  -2.83371   TATCGCAGGAATAAT         GTTAAGGCGC TGATTC GCGCCTT-AC          GCTATTTACCAGCTT  57 31
        pepA 3586851 .. 3586862 -    -3  -3.71848   CTGTGGCATGAATAA                TTAG TCCT CTAA                 CTTGATGTCTGCGCG  51 14
JN178_RS15890 3586423 .. 3586443 -  -6.9  -2.62545   TAGATGCGAAAAACT            TATGCAGAT TTA AACTGCATA            TTGCAACCAGCTTGC  59 4
JN178_RS15885 3583535 .. 3583555 - -15.5  -5.64421   ACTGGAAATAAAAAA            GGGCTGTCT ATA AGACAGCCC            TTTTTGCAAGAAACA 100 82
JN178_RS15850 3574786 .. 3574803 -  -5.6  -3.15999   CTGCCACACAGCCAA             CTTTGG TTGCAG CCAAAG              TCTGGGCCTCACTTT  54 104
JN178_RS15845 3573614 .. 3573645 -  -9.6  -5.26155   AGAGAAAGACAAAAA      TTAAAAAAGGCACA ATAG CGTGCCTTTTTTTA       GTTCATTCGCGTTTA 100 69
        typA 3566504 .. 3566522 -  -8.9  -5.73339   ATAAGGACAAAAAAA             TGCCAAC TCGAT GTTGGCA             TTTTTCAAAGCTATT 100 55
JN178_RS15815 NONE
JN178_RS15810 3564566 .. 3564599 - -14.8  -5.48063   AGCTAATACAAAAAA     CAGCGCTTCA-CGAT GCGTT ATCGATGAAGCGCTG     TTTTAATTGACCTTT 100 89
JN178_RS15800 3562102 .. 3562153 -  -3.3  -5.44119   GCTAGCGGAAAAAAA CTGTAGTATTAAAGATAACACT CAAGGAGCC AGTGTTATCTTTAA-ACCGCTG CTGAGCCAGGGTGCA  78 344
JN178_RS15780 NONE
JN178_RS15775 3557420 .. 3557431 -  -2.2  -4.07568   TGTTCTTCCCGAAAA                GGCT CTGT AACC                 TCACAACCTTTACAT  54 215
        minC NONE
        minD NONE
        minE 3555468 .. 3555494 - -12.3  -5.95539   TTTCAAATAAAAAAA         GCGACCTAGTC AGACA GGCTAGGTCGC         TTTTATAAATGAAGT 100 54
JN178_RS15755 NONE
JN178_RS15750 3552366 .. 3552389 -  -2.4  -3.40597   TCGCTTAGGTAAATA          GGCAAGTATT TAAC AACACGTACC           GACCAAACGCCCTAC  46 37
JN178_RS15745 3551880 .. 3551892 -  -9.1   -5.0925   TCTCAAAATGAAAAA                GGGCT TTT AGCCC                TTTTAATAAGTTACT  91 55
JN178_RS15740 3550918 .. 3550944 - -13.1  -6.20267   TGAAAAATAAAAAAA         GCAGCATGCTG ATAAA CAACATGCTGC         TTAGGGCAACCAGCG 100 53
JN178_RS15735 NONE
JN178_RS15730 NONE
JN178_RS15725 3547431 .. 3547444 -  -3.8  -5.88471   GAGGAGCAAAAAAAA               CGCT TTGAAG AGCG                TCTTCACAACCCTTT 100 336
        erpA 3546226 .. 3546237 -  -5.8  -3.07895   TTTATCGGCAAGACA                GGTC AATT GACC                 CAATAGAAGTTCAAA  57 163
JN178_RS15710 NONE
JN178_RS15705 3543400 .. 3543428 - -11.8  -4.21974   TCATTATCGAATAAA        CCAATACACACC ATTTA GGTGCGCATTGG        CTGGATTGGTAGATT  93 11
JN178_RS15700 3542771 .. 3542781 -  -5.4  -3.87815   TTCGACTTTGATAAA                 GGTT ATT AACC                 CGCTTGTAGGCGCAT  63 44
JN178_RS15690 3539705 .. 3539734 -  -6.4  -5.86061   CGTGAGCAAAAAAAA       TCCCGAGCCC GCGTAAGGAA AGGCCCGGGA        GAAGGAGTACATCCT 100 113
JN178_RS15685 3539182 .. 3539200 - -10.2   -5.1101   GCATTAGTTAAAAAA             GGTGGGGC CTT GCTCCACC             TTAATTGATTGACTG  93 51
JN178_RS15665 3533718 .. 3533736 - -10.3  -5.48787   AGAAGACATAAAAAA             GCCCATC GTTAA GATGGGC             CGTATTTTTGAGCGT 100 53
JN178_RS15610 3524977 .. 3525011 -  -7.9  -2.87647   ATTCACTATATGATA     TGCTGACGTTAAACT AGGTA AGACTTACGTCAGCA     ACTTGATATCATTTG  62 34
JN178_RS15605 3521882 .. 3521895 -  -3.7  -2.78679   CCGCCTGATGCAAAT               GGTCG TCGA CGCCC                TGTTGAAGTTGAAGG  45 400
JN178_RS15590 3514732 .. 3514749 -  -2.7  -2.64912   TCGGGAATGTACAAC             GTAATTG CCGT CATTTAC              TTGGTAACTTTTCAC  41 18
        arcB 3512250 .. 3512263 -  -9.5  -5.14563   GCCGCCACTAAAAAA               GGGGC AAAA GCCCC                TTTTTAAATGAACGA  91 72
JN178_RS15580 NONE
JN178_RS15575 3510010 .. 3510037 -   -12  -4.93877   CGGGATGAAACAAAA        GCGCAGGCCTAA CGAA CTAGCCCTGCGC         ATTGATGCTTTTCTA 100 38
JN178_RS15540 3498241 .. 3498257 - -12.3  -6.00814   AACAAGCAAAAAAAA              GCCGGTT TAA AACCGGC              TTTGCTCAATTATCT 100 46
JN178_RS15535 NONE
JN178_RS15530 3497497 .. 3497510 -  -4.5  -3.01001   TATCTCGAAACTAGA               CGCAA CTAA TCGCG                TAGATGCAGCGCGCA  49 103
        rsmI 3488524 .. 3488547 - -15.4  -4.86033   AAACTTCGACAAAAA          GAAAACCCGC TAAA GCGGGTTTTC           TTTTACTCTATTTCG 100 51
JN178_RS15455 NONE
JN178_RS15450 3482770 .. 3482810 - -12.7  -3.66274   AAGAACGAGAGATAA  GTCTGCATTCATCGTTACA GCC TGTGTTGATGAATGCAGAC  CCAAACTTGATGTTT  95 355
JN178_RS15430 3478603 .. 3478637 -  -5.6  -3.05521   ACTAGAGCGTGAATA     CCTTTGGCGGGGTAAA CCT TTTACACCGCCATCGC     ACTTTTTTGTGTTTC  54 11
JN178_RS15405 3473730 .. 3473758 -  -9.5  -3.26405   CTGACCTAAAAACGA        TGGTGCCCTCGGT AGT ACAAGGGGCACCA        TATCGAAACATCTTC  75 47
JN178_RS15390 NONE
JN178_RS15385 3470178 .. 3470196 - -10.3  -4.88228   ACGCAACACTAAAAA             GGCTCGT ATCAA ACGAGCC             TTTTTGCTTCACTAT  93 42
JN178_RS15375 3467661 .. 3467682 -    -8  -5.76949   CATGTGTAAAAAAAA           GCCCGCTCT GTGTT AG-GCGGGC           TTTCGTTGTCTTTTG 100 251
        thrB NONE
        thrC NONE
         ung 3461912 .. 3461957 - -20.7    -3.695   TGGAAACACTGGAAA GATAACAAAAAGGCCGCCTGA ACAT TCAGGCGGCCTTTTTACTTTC TTAAGGGTAATTCGC 100 173
        yaaA 3457564 .. 3457613 -  -3.8  -4.10925   ACAGAGGGTTTAAAA CATAGCGAGCGTAGGTGGCGAACCT AGT AAGTTCGCCACCTTT--TC-CTATG CTGTGAATTACCGTT  59 45
JN178_RS15325 3456177 .. 3456204 -    -7  -4.95547   GTTATAATAATAAAA        GGGTACTTCACTC GAT GAGCGT-GTACCC        TTTGCTATATTGGTA  83 89
JN178_RS15320 NONE
JN178_RS15315 NONE
JN178_RS15310 3454378 .. 3454394 -  -3.7  -3.14344   CAGCCCTTGTATGAA              CAGATAA GTG TTAACTG              TAAGTTGAATAGGTA  48 99
JN178_RS15305 NONE
JN178_RS15300 3451773 .. 3451797 -    -8  -5.88197   GCAAATATAAAAAAA         GCCAGT-GATA AACA TATCGACTGGC          CTTTTGCGTATCAGT 100 49
JN178_RS15295 3451232 .. 3451248 -  -8.1  -2.62668   TACCACTTAACGAAT              GTGTTTT TGA AAAACAC              GCTCACTCAACGTTA  65 106
JN178_RS15290 3449934 .. 3449949 -    -6  -2.59564   GCGCTATTCGACAAG              GCGCCG AACT CGCCGC               AGCAATATAGTATTA  54 38
JN178_RS15270 3442665 .. 3442676 -  -2.2  -3.90291   ATGTTGCCAATCAAA                CCGA TACT TCGA                 GGAAAAGAATGAAAT  52 106
JN178_RS15265 3441911 .. 3441940 - -16.7  -2.80994   TTTAACGTCAGTACA       TGCAGATAAGACA TTAA TGTCTTATCTGCA        TTCTAAACTACCTGC 100 33
JN178_RS15240 NONE
JN178_RS15235 NONE
JN178_RS15230 3436503 .. 3436513 -  -6.8  -2.77862   CAGAGCAAGAGATGA                 CGCA GCG TGCG                 CGTAAATTCGCTAAC  55 224
JN178_RS15205 3432113 .. 3432128 - -11.8  -6.04324   TTAAAAAACAAAAAA              CGCCGC AATT GCGGCG               TTTATTCTCTATGGC 100 46
JN178_RS15195 3430411 .. 3430430 -  -3.5  -4.97402   CAAAACGTATAAAAA            GCTACGG CGAGCC CCGTAGT             GCAAAGTGTAGAAAT  69 134
JN178_RS15190 3428317 .. 3428352 - -13.3  -5.31519   AGATCCAAACAAAAA    CGCCCCCAGAAGTCA GAACGA TGACCGCTGGAGGCG     TTTTTTACGTTTGTA 100 88
JN178_RS15185 NONE
        prsK NONE
        prsR 3423010 .. 3423036 -  -2.2  -3.65046   TTTCGAGCTCAAGAA         TTGCCACATCGT TTA ACAACGTCGCTA         GCATCACTTGGCCAG  49 418
JN178_RS15150 3418703 .. 3418726 - -13.2  -5.67283   AACGGAAATAAAAAA          CGGGAGCATA ATAG CATGCTCCCG           CAAATTTTCGAGCTA 100 69
JN178_RS15145 3417601 .. 3417615 -  -3.5  -2.92026   CATGCTAATAGCATA               GCGCT AAGCA AGCAC               ACAGTAAATACATCT  45 41
JN178_RS15140 3417019 .. 3417061 -  -2.9  -4.29073   TAACAACCCAATAAA CATTGCTTTCATT-CAAGGG CAGC CCCTTACAACAAAAACAAGG CAGATCTAGACTGTT  58 31
JN178_RS15135 NONE
JN178_RS15130 NONE
JN178_RS15125 3410458 .. 3410471 -  -2.3  -3.94812   GTTGATTGAAAAAGA               GGGTG AAGA CAGCC                CTAAACTCGCGACTT  53 370
JN178_RS15115 3408291 .. 3408306 -  -7.5  -5.43414   AGCAGATACAAAAAA              CCCGC TTTTAC GCGGG               TTTTTCTATTCAATT 100 52
JN178_RS15110 3407306 .. 3407326 - -11.9  -5.42198   TGTGAAAAAAGAAAA            GGAGCACGT TAA ACATGCTCC            TTTATAGAGGAATCG 100 51
        mraZ NONE
        rsmH NONE
        ftsL NONE
JN178_RS15090 NONE
JN178_RS15085 NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
JN178_RS15050 NONE
JN178_RS15045 NONE
        ftsA NONE
        ftsZ 3389658 .. 3389673 -  -7.6  -3.03903   AAAATTTGCCCAATA              TGCCAT CAAA ATGGCA               TCAATTTGGCTTATT  64 141
        lpxC 3388637 .. 3388652 - -11.8  -5.58454   GCCATACGAAAAAAA              GCCGCC CGTA GGCGGC               TTTTCACAATTTTTT 100 40
JN178_RS15025 3387516 .. 3387527 -  -2.2  -4.03104   TAAACCAATAAAACA                CAAC CACG GCTG                 ATCATGTTTTGCGAT  52 112
        secA NONE
        mutT 3384319 .. 3384337 - -14.6  -5.52023   ATTACCAATAAAAAA             CGGCCACT ATA AGTGGCCG             TTTTTGTTTAAGGTA 100 43
JN178_RS15000 3381453 .. 3381468 -  -2.6  -3.25061   CGATATAGAAGAAAT              TG-AAGC GAT GCTTGCA              CAGCAACAAGAAGAC  45 129
        ampD NONE
        ampE 3373437 .. 3373473 - -10.4  -2.90841   ATATTGAGACGAAAG    CGTCTGATCTATAAAC AAATA ATTTATAGACCAAACG    TAGCTCTAGTAGATA  77 67
JN178_RS14945 3372396 .. 3372422 - -10.4  -3.33696   GCCTCTGCGAATGAA         TAGTTAAACAAC AAT GTTATTTAACTA         AATTTCCAGTCGGCG  79 23
        aceE NONE
        aceF 3367481 .. 3367516 -  -4.2  -2.52946   TGGGCTTATAAAATC    GTCGAAAATG-TTAC TGATATT GTAAACTTTTTCGAC    CTTTTATTTAAAGTA  47 33
        lpdA 3365927 .. 3365943 - -13.7  -5.47431   GCAAGATACAAAAAA              CCCGCTC GTT GAGCGGG              TTTTAATTAATTAGC 100 52
JN178_RS14925 3365262 .. 3365285 -  -2.4  -5.17507   AAAATTGAAGAAAAA          GTGATTGCTT AAAC ACGCAATAAC           AGAACAAGTAGCAGG  69 42
JN178_RS14915 NONE
JN178_RS14910 3358942 .. 3358961 - -13.6  -5.86332   TTAAGGCAAAAAAAA            GGCCACTC AAAT GAGTGGCC             TAAAGAGCCCCTTAA 100 69
JN178_RS14905 3358067 .. 3358088 -  -4.4  -4.62803   TCAAACAACAATAAA           CAGCACCT AAATAA AGGCACTG            TTTGCATGTTGTTTT  68 64
JN178_RS14900 3357681 .. 3357693 -  -4.1  -3.57462   GACCCTACCCTTAAA                CACGT ATT ACGTA                TTTATAGATCACCGA  53 27
JN178_RS14895 3356736 .. 3356757 - -10.2  -2.73875   TCCGTTGGAAGAGCA           TGCTAGCG GTTTGA CGCTAGCA            TTATAATTCTGATTT  74 48
JN178_RS14890 3355741 .. 3355759 - -11.6  -4.07455   TATTAAGAGTATAAA             GGTCGCGC CAA GCGCGGCC             TGATAAACATTGCTG  90 122
JN178_RS14885 3354844 .. 3354873 - -14.5  -3.56092   GCACCACGTTTTAAA       CAAAAAACGCTGC AAAT GCAGCGTTTTTTA        TATTTAACAATTAGC 100 51
JN178_RS14840 3345613 .. 3345625 -  -4.1  -3.04404   GCACTAATCATAAAC                CCTAG TCC CTAGA                TCGTATGTGTGAAGC  47 59
        pepP NONE
        ubiH 3342888 .. 3342898 -  -5.4  -3.37959   CAATGGCAATATCAA                 CATG CTG CATG                 ATTTTCTTTACTCTC  56 43
JN178_RS14825 3341650 .. 3341677 - -11.4  -5.24129   TGCTCGTACAAAAAA        GAAAAGGATACC GCAG GGTATCCTTTAC         TTATTGCTATCTCAA 100 73
JN178_RS14820 NONE
JN178_RS14815 NONE
JN178_RS14810 3337697 .. 3337726 - -10.1  -4.93696   TTCAAATAGTAAAAA       GGCAGCG-GTCTAA TAG TTAGATGCGCTGCC       TTTTTGTTTGGGCGT  93 66
JN178_RS14785 3330935 .. 3330956 - -12.3  -4.41633   TACGTTTAAAAACAA           GGGTAGAGC TTGT GCCCTACCC            TTTTGCAACGTAAAA 100 76
JN178_RS14780 3328345 .. 3328366 -  -8.8   -4.7497   TTTAGCCATTAAAAA           CAAGCACT TACAAC AGTGCTTG            TCGGCTCGTTTTTTG  88 11
JN178_RS14775 NONE
JN178_RS14770 NONE
        nagA NONE
JN178_RS14760 3323612 .. 3323645 -  -8.3  -3.09878   TGTATTTAGGCAATA     TCG-CGGCGCCTTTTA AAG TAAAAGACGCCAACAA     TCAGCTGCAAGCTGT  66 119
JN178_RS14750 3321410 .. 3321430 - -15.5  -5.27923   TAACGGCACAAAAAA            GGCGCTAGT GTA ACTAGCGCC            TGTCTATGAATTTGC 100 213
        gcvT NONE
        gcvH 3317952 .. 3317972 -  -7.6  -4.74103   TCTTTAAGTTAAAAA           GGGGCGCTA AATC TAG-GCCCC            TTTTTGAAACTGTGA  84 63
        gcvP 3314849 .. 3314880 - -13.2  -4.64334   AAGGCTGTAAGAAAA      CAAAAAAGCGAACC AACT GGTTCGCTTTTTCA       ATTTTTACTGACCTC 100 126
JN178_RS14690 3303361 .. 3303403 -  -4.6  -3.66874   TCAAGCTTACTCAAA GGTTTATTAACTAGATTTTC TACGC AAAAATCT-G-TAATAAACC ACAAACAGATGTAAG  55 414
JN178_RS14675 3297183 .. 3297199 -  -3.7  -3.70081   AGATAATTGCAATAA              GATCATG ATG CACAATC              TCCATTGGTTTTAAA  53 11
JN178_RS14670 3296341 .. 3296360 -   -10  -3.31726   CGCGGCCATAGAAGA            GCAGCTGG CTGA CCAGCTAC             TTATTCCTATGGTGC  76 224
JN178_RS14640 3290588 .. 3290621 -  -6.8  -5.02323   CCACGATAAATAAAA     GCTGTAGCCCATAGA GTCCA TCTACTGGCTAC-GC     TAAATCTTATGACTG  83 102
JN178_RS14635 NONE
JN178_RS14630 3288272 .. 3288295 - -12.6  -3.80114   TATTAAGTTAGTAAA          CGTTTCTTGA ACAT TCAAGAAACG           CAAAAGAACCGGCGA  95 153
JN178_RS14625 NONE
JN178_RS14620 NONE
JN178_RS14595 3277524 .. 3277542 -  -3.9  -4.77629   AAAATGAACACAAAA             CCACTAA GGGTT TTAGTGA             GCAATTAAACGTGCT  71 125
JN178_RS14575 3271907 .. 3271935 - -13.4  -2.58892   ATCGATAGTAACGCA        TTGCCTGTAATT ACAAG AATTACAGGCAA        TGTCTTTCGTTCAGT  91 40
JN178_RS14565 3270498 .. 3270508 -  -6.8  -2.87211   ATGCGCGCTGACAGA                 CGGT AAA ACCG                 AATATTCAAAGTGGC  56 273
JN178_RS14525 NONE
JN178_RS14520 NONE
JN178_RS14515 NONE
JN178_RS14510 3260845 .. 3260856 -  -2.2   -3.2827   TTATTGAAGCAGTAA                CAGA AGCT TCCG                 TTTGGCTTGGCAAAA  45 492
JN178_RS14485 3255071 .. 3255088 - -11.3  -5.29385   AAGCGAATTAAAAAA             GCCGAGT AAAC ACTCGGC              TTTTTAGTGTGTTTT 100 80
JN178_RS14480 3252351 .. 3252365 -  -2.1  -2.91695   TGGAGCTTCAAACTA               CTGCA GATAG TACAG               TCGGCGAAGACAAAC  41 93
JN178_RS14470 3250190 .. 3250214 -  -5.1  -2.50492   TAGCATTACTAATAT          TTTGGTTAACT TTC AATTAACCACA          CGACCAACCACCCAA  49 115
JN178_RS14465 3246833 .. 3246852 -  -9.3  -5.80951   AGTGAAAACAAAAAA            CGGCAGA ACACTG TCTGCCG             TTTTTTATCAAAGGC 100 45
JN178_RS14460 3244692 .. 3244706 -  -5.7  -3.80276   ACCGACACAATAGAA               GCCAT ACATG ATGGC               AGCTGGTTTTTTGAA  61 158
JN178_RS14445 NONE
JN178_RS14440 NONE
JN178_RS14435 NONE
        gloA 3239539 .. 3239582 - -15.6  -3.36492   CGTTGAATGGTAGAA GAGAAAATACTAAAAGGAGC TGGT GCTCCTTTTAGTGTTTTTTC GAATTTACTTCTTTA 100 30
JN178_RS14400 3233052 .. 3233062 -    -4  -4.05529   ACAAGTAGGAAAGAA                 CAAA TAC TTTG                 ATTTACATTTTGCAA  59 295
JN178_RS14390 NONE
JN178_RS14385 3229455 .. 3229496 - -13.3  -3.18812   AAGAAAAAAAGATGA TTTGGATACCATGACCTTAC AAA ATAAGGTCATGG-ATCCAAT TAAGAGAAGGCAACT  95 0
JN178_RS14380 3228646 .. 3228696 - -17.9  -2.56288   AAAGCAGTGAATTGA GTAAAGTGTCA-GGCCTTTCGCTT TCTT AAGCGAAAGGCCATGAAACTGTAC AATGTTGTAAGCAAT 100 55
JN178_RS14370 3226171 .. 3226197 -  -2.9  -3.84585   AGTGACTACAAAACA         CTTGCCAACGT TAACC ACATTGGCGTG         GTGGTAGCTGATCTT  52 239
        soxR 3225360 .. 3225371 -    -3  -2.79183   CTTACGTGCATGAGA                GATT GTGA AATC                 TTGTATTTAGTTGAA  42 50
        rlmF 3224411 .. 3224433 - -13.5  -4.18119   AGCAAAGCACAGAAA           TGCGCGCTT TTCTT AAGCGCGCA           TTTTTCTCAACGACA 100 45
JN178_RS14325 3216836 .. 3216846 -  -5.4  -4.28548   ATGGAGCTAGCAAAA                 GCAA GAC TTGC                 CAATACATGCCAAAC  67 351
JN178_RS14315 NONE
JN178_RS14310 3212974 .. 3212985 -  -2.2  -3.04983   CTAACGTATATAAAC                GCAT CATA ACGC                 TGTAGGTTTACCAGA  42 17
JN178_RS14305 3212158 .. 3212171 -  -2.4  -3.40592   CAGACGAAAACTCAA               GTAC TGCGTG GTAC                ACAACAAACTATTGT  46 46
JN178_RS14300 NONE
        ylqF 3210189 .. 3210209 -  -5.5  -2.50816   CTCGCATGGACTAAC            CTTAACATT GTT AATGTTATG            TTAGTATCAAGCAAT  50 99
JN178_RS14290 NONE
JN178_RS14285 3207303 .. 3207328 -  -9.7  -5.14965   ATGGGCATTAAAAAA         GCCCAGATAGT TTAC ACCTTCTGGGC          TTTTGCAAAACGTTC  93 283
JN178_RS14280 3206733 .. 3206748 -    -4  -3.39923   AGTAGCAAAAGGTAA              CGTTGA TCCC TCAACA               TGGGGAGTAAACGAG  50 325
         upp NONE
JN178_RS14265 3203248 .. 3203261 -  -3.1   -2.5474   GCTGAGCTAGAAGAT               GGAAC GGCA ATTCC                TGGTCAATCTGATAA  42 419
JN178_RS14235 NONE
JN178_RS14230 3193284 .. 3193299 - -11.8  -4.60713   GAAAATAGGATAAAA              GCGCGC TGGT GCGCGC               TCAGTAGGCTTTATC 100 26
        lpxL 3192043 .. 3192060 -  -2.1  -3.83205   ATTTTTTATATCAAA             TAATGGTG TAA CAC-ATTA             CGTGTTGAGCATCGC  50 210
JN178_RS14220 3191310 .. 3191364 -  -4.4  -3.86431   AACAACACAATACAA CGC-ATTATTTGGGAAGTGTGGTAC ATCGTA GTACCACACTTAACAGATTACAGCG GTTAATTTACCCTCT  57 32
JN178_RS14210 3187346 .. 3187374 - -10.4  -4.52873   GTCGCAGAAAAACAA        GGTCATCGAGCA AGGTG TACTCAATGACC        TGCTATGTATTAAAG  89 85
        hldE NONE
JN178_RS14195 3184351 .. 3184379 -   -14   -5.4505   CGGTCTAATAAAAAA       GCGCCTG-TACGT AAAA ACGTATCAGGCGC        TTTTTTGTTGTTTGC 100 62
JN178_RS14170 NONE
JN178_RS14165 NONE
         xrt NONE
JN178_RS14155 NONE
        asnB NONE
JN178_RS14145 NONE
JN178_RS14140 NONE
JN178_RS14135 NONE
JN178_RS14130 NONE
JN178_RS14125 NONE
        asnB NONE
JN178_RS14115 NONE
JN178_RS14110 NONE
JN178_RS14105 NONE
JN178_RS14100 3160790 .. 3160803 -  -2.4  -3.55582   ATAAGAGCTAGACAA               GCTA TTCTGC TAGC                TAAACCTTAAACCTA  48 221
JN178_RS14095 3159256 .. 3159287 -  -6.5  -2.90075   CGCTTTCGAAGTATA      TGTCTAGGGAGCCC AAATA GGGCTCCCTTG-CT      TTATTAGCCCTTTAA  58 57
JN178_RS14075 NONE
JN178_RS14070 3152027 .. 3152048 -  -8.8  -6.13503   GAGGAATAAAAAAAA           GGCTATTC TCTAAG GAATAGCC            TTTACAATATGTGGC 100 13
JN178_RS14060 NONE
JN178_RS14055 3146929 .. 3146940 -    -3  -4.25283   ACGTCCTCATTAAAA                GAAA ATGG TTTC                 ATTCTATCGATATTA  58 130
JN178_RS14050 3145979 .. 3145996 - -12.7  -5.46276   AACAGACACAAAAAA             GCCCAGC TACT GCTGGGC              TTTAATATTTAGTGT 100 69
JN178_RS14035 3143018 .. 3143036 -  -7.4  -2.94322   AGTTCATCGAAATGA             TTAGGCGC ATA ACGCCCAA             ATACAATATCGAACC  59 363
JN178_RS14025 3140707 .. 3140732 -  -4.7   -3.0771   TTTCAAAGTACAAAT         GCAGACCATTA CACA TGATGGTCCAC          TAAGAATGTAGCTAA  52 8
JN178_RS14020 NONE
JN178_RS14015 NONE
JN178_RS14010 3138521 .. 3138532 -  -4.4  -2.93708   CTCTCCCAAAAATAT                TAGC GTGA GCTA                 TTTAGATGTCCCTTC  49 23
JN178_RS14005 3137330 .. 3137341 -  -2.2  -4.03179   TATAGGACAACGAAA                GAGT TTCT ACCC                 AAAAAATGTGCAGGA  55 169
JN178_RS13975 3128526 .. 3128553 -    -7  -3.11281   CTAGCGAAAAGCACA        TTGCACCTG-CAC ACG GCGACAGGTGCCA        TTAGTGTAAAACACA  62 176
JN178_RS13970 3126834 .. 3126856 - -12.1  -4.82901   TGGTGTGTATAAAAA           TAAAGCGCC TCTAG GGCGCTTTA           CCAATACAAATCGTT 100 45
        glsB NONE
JN178_RS13900 3113803 .. 3113813 -  -2.6  -4.63486   ACTCGGTTAACAAAA                 TAAT AGG ATTA                 AGTCTCATGTTGTGA  62 364
        queA NONE
         tgt NONE
        yajC NONE
        secD NONE
        secF 3108192 .. 3108208 - -12.3  -5.71712   CCGTATATAAAAAAA              CCGCATC ACA GATGCGG              TTTTTGTTTTTACGA 100 52
JN178_RS13865 3105776 .. 3105796 -  -8.3  -3.78329   TGCTACGAATCGAAA            GGCGCTA TCAAATT TAGCGCC            TTTTTTTGTATGTAT  75 101
        trmJ NONE
        cysE NONE
        iscR NONE
JN178_RS13840 3101221 .. 3101245 -  -2.2   -2.6062   GGTATTATATAATAC          CCGACTATTT CACTC AAATATTCAG          CCGTTTATTTACCGC  40 81
        sufB NONE
        sufC NONE
        sufD NONE
JN178_RS13820 3096346 .. 3096357 -  -5.8  -2.63382   TTCTACACTCATAAT                GCCT CCTT AGGC                 CAACATCATTTTTGC  54 20
JN178_RS13815 3095986 .. 3095999 -  -3.9  -2.70932   TGCTGGCCTTAACCA               TTAAC CTAC GTTAA                AGCTCTCGCCACAAC  45 12
        sufT 3095398 .. 3095413 -  -3.3  -3.21234   AGGTAAATTGAAAAT              GTTGT GAGAAT ACAAC               TTAGAAAAACAGCCC  46 26
JN178_RS13805 3094889 .. 3094929 -  -6.3  -2.89743   AATGTACACATTACA TTGCGCTGACAGGCACTT AGTTAG AAATACCTGTCAG-GCGA  ATATCGGTGTTTACA  56 43
         ndk 3094240 .. 3094257 - -14.1  -5.48623   AAATAGAAACAAAAA             CGGGGCC CTTA GGCCCCG              TTTCTCTGCTTCTGT 100 45
   trmG/rlmN NONE
        pilW NONE
JN178_RS13785 NONE
        ispG 3089463 .. 3089480 -  -5.5  -4.17089   GCTAAATGGGGAAAA             GCCCC GCATTATA GGGGC              TTTGGAAGTAAACAA  65 59
        hisS NONE
JN178_RS13770 NONE
        bamB 3086158 .. 3086187 - -12.9  -5.61881   GCGTAAAAACAAAAA       CGGCGACACAACC GTTA GGTTACATCGCCG        CTTTAATAAAGTGCT 100 48
         der 3084440 .. 3084453 -  -9.5  -5.39721   TGAGGATACAAAAAA               GCCGC TTGC GCGGC                TTTTAGAAATGTCTT 100 86
JN178_RS13755 3083280 .. 3083297 -  -4.1  -4.07568   TGTGGTGCCGCAAAA             CGCTACT GACC AGTAGAG              ATAGCCTACAAGTGG  59 141
JN178_RS13750 NONE
        guaB 3079001 .. 3079019 - -10.3  -4.78266   AAATAAAAGAACAAA             GGCTGGT GTATT ACCAGCC             TCGCAGTCGTCGGTC  91 44
        guaA 3077335 .. 3077360 - -11.3  -4.61199   AGGCCATATATAAAA         GGCTACTTTAC AAAA ATAAAGTAGCC          TTATAAATCAATCCA  90 55
JN178_RS13725 3076204 .. 3076226 -   -15  -2.73309   CCTGAATAAGAAGAT           GGTGCGTAAA TGT TTTACGCACC           TAAAATAGAATTCAG 100 41
JN178_RS13720 3074136 .. 3074151 -  -3.3  -3.32456   AAAGCACAACTAATA              CAAGT CGTTTC ACTTG               GGATCTCCTATCAAT  48 19
JN178_RS13715 NONE
JN178_RS13710 NONE
JN178_RS13705 3072073 .. 3072090 -  -2.7  -3.60792   TGCGTAATGGGCAAA             GATGTAA AGCG TTGCATC              ACTTCCTCAACGACA  49 24
        msrP NONE
JN178_RS13695 3070465 .. 3070479 -    -5  -3.41051   TTATTTTTATGACAA               TACTGT TAC ACAGCA               GCAAACAAGTCGCGA  56 48
JN178_RS13690 3068741 .. 3068755 -  -7.1  -5.44119   TTTATTGCAAAAAAA               GGAGC GCGAA GCTCC               TTTTGTAATACTGAC  91 50
JN178_RS13685 3067751 .. 3067764 -  -6.7  -2.65298   CTTATCGATTACAAC               CGTTC ACAA GAACG                TATTGGTATCGGTTT  55 73
JN178_RS13650 NONE
JN178_RS13645 NONE
JN178_RS13640 NONE
JN178_RS13635 3060812 .. 3060825 -  -5.3  -4.23054   AGATATCATTGAAAA               GCTTT AGAT AAAGC                TTGAAAATATGGTGC  68 35
JN178_RS13630 3060399 .. 3060412 -  -8.1  -2.91274   GTTACCTCAACTATA               CGCCT TTAC AGGCG                TTTTGTTCTCAATCC  67 329
         tig 3059012 .. 3059031 - -12.2  -5.61881   CGTTAAAAACAAAAA            TGCTCGGA AGGC TCCGAGCA             TTTAAGCAGTTGCTG 100 70
        clpP 3058313 .. 3058323 -  -6.8  -2.80533   GCCGAAAACCATAAC                 GTGC GAT GCAC                 TGGCTCGGGTTCTCT  57 50
        clpX 3056960 .. 3056987 - -13.6  -4.57569   GTAGCGGTTTAAAAA        CAAAAAAGGCCC CGAA GGGCCTTTTTTA         CAACCTAACAATTAC 100 37
JN178_RS13610 3055508 .. 3055532 -  -4.2  -4.44245   ACATCAGTGATAAAA          GCTACGCAAC TGCCG GTTGAGAAGC          TTTTTCATCAATTAG  66 37
         lon 3052887 .. 3052921 -    -5  -5.44721   ATTATTTCAAAAAAA     TGGCTACACGCCTTTA AAA TTAAGCAATGTAGCCA     TTGTAACTAGTTAGT  82 36
        hupB 3052308 .. 3052328 - -12.6  -5.72622   TTTACAAATAAAAAA            GGCGATGG ACTAG CCATCGCC            TTTTTCTATAATTTC 100 46
JN178_RS13595 3050097 .. 3050120 -   -11   -5.4251   GTGAGACACAAAAAA          GCCCCTTTCA TGAA TGGAAGGGGC           TTTTTAGTTAGCGTA 100 56
        dapE 3048243 .. 3048254 -  -5.8  -3.57561   TCTGAAGTTGCCAAA                GACG GTGG CGTC                 GCCTTTTTAGGCTTT  59 214
JN178_RS13570 3043361 .. 3043381 - -12.7  -5.63517   GTTTGAAATAAAAAA            GGCTGATAT CAA ATATCAGCC            TTTGCGAAACAATAG 100 46
JN178_RS13560 NONE
JN178_RS13555 NONE
JN178_RS13550 NONE
JN178_RS13545 3038649 .. 3038662 -  -9.5  -5.19212   ATTAGTAGTAAAAAA               GCGCC TTAC GGCGC                TTTTTTTGTATCTGC 100 66
        ribF NONE
        ileS NONE
        lspA 3031895 .. 3031905 -    -4   -3.5393   ATGACTTTTCCGAAA                 CTTA CTT TAAG                 GTTTCACTATTTTGT  51 16
        fkpB NONE
        ispH 3030416 .. 3030435 - -10.7  -5.29846   AAGTGGAAACAAAAA            CACCGCG ACAATG CGCGGTG             TTTTAAAAAAGTACG 100 57
JN178_RS13505 NONE
JN178_RS13500 NONE
JN178_RS13495 NONE
JN178_RS13490 NONE
JN178_RS13485 3023296 .. 3023311 -  -4.8  -3.28256   TATATTCAAACAAAG              TTGTTA CTGA TAACAA               TTGTTGAGTCAAAAG  54 183
JN178_RS13460 3020493 .. 3020508 -  -3.2  -2.83371   TATTTGACGAACAAG              GTGGTA TTGA TACCGC               AGCCACGATAACAAT  43 197
        nadE NONE
JN178_RS13445 3018607 .. 3018632 - -13.3  -4.95547   CGCACAATAAGAAAA         GGGGAGCACAC TACT GTCTGCTCCCC          TTTGTACTTTCTTAC 100 48
JN178_RS13430 3016462 .. 3016472 -  -3.2  -3.07088   ACTATTACAGATAGA                 GCAG TGG CTAC                 ATATCGGTAAGGAGA  46 57
JN178_RS13425 NONE
JN178_RS13420 3015030 .. 3015047 -  -9.9  -5.16572   ATCTAAGGTAAAAAA             GGTGAGT TAAT ACTCACC              TTTTTTTGTAATCGC  93 59
        rpoE NONE
JN178_RS13405 3011723 .. 3011747 -   -13   -3.3353   TGCCTCAGAAACAGA          CAAACCAGCA GTAGA TGCTGGTTTG          CACTTTAAAAATAAA  95 136
JN178_RS13400 3010562 .. 3010572 -    -4  -2.71144   CAGTTTCTTTAATCA                 TACA GCC TGTA                 TTCTCTTTATTTAAT  45 36
JN178_RS13395 3009931 .. 3009949 -  -3.8  -4.98352   ATTAAACAAAATAAA             GCTACG AGTTATA CGCAGC             GCGAGCGGATTTTAC  71 192
        lepA NONE
        lepB NONE
         rnc NONE
         era 3005513 .. 3005542 -  -7.1  -2.74188   GATGATAACGAGAAG       GGGCGATGCCAAG ATCA CTTGGCATCAGAC        TTACGGTTTAATGTA  60 54
        pdxH NONE
JN178_RS13365 3003738 .. 3003754 -  -8.7  -3.20841   ACATTCACATGAATA              CCCAAGC GGT GCTTGAG              AGCCCGCTAACCTTA  67 235
        serB 3002051 .. 3002068 -  -9.1  -4.65916   CTCACCGCAACAAAA             GAGCGCC ATTT AGCGCTC              TTTTTTCGTTAGTAC  86 44
        radA 2997857 .. 2997881 -  -9.4  -2.59191   TCATAGTGTTACAAG          TTAACGCTCT ACTCG AGAGCGTCAA          GTGCTTCTGATAGAC  71 9
        lpxD 2994234 .. 2994261 - -12.8  -3.17516   GAAATTAATACAAAT        GGCGTAGGTTTA ACGA TATACCTACGCC         GATATTCAATTAGCG  91 35
JN178_RS13325 2992729 .. 2992783 -  -9.5  -3.65603   AAATATCCTTAACAA TTGCGTACTTAGGTTCTCAT-CAGAG TTAT CTCTGCATTACTACCAAAGTACGCAA TAAAAGACAAACCTA  78 42
        nrdR 2992237 .. 2992250 -  -3.9  -2.57211   AGCGTGGTCCACAAT               TTATC CTGT GATAA                GCGGGTTTCGCCTCA  45 38
        ribD NONE
JN178_RS13310 NONE
        ribB 2989185 .. 2989212 - -13.4  -3.60296   CATGTCCATCGCAAA        CCCTCCACCGCA TGGA TGCGGTGGCGGA         GCGTACATGGATGTA 100 103
        ribE NONE
        nusB 2988106 .. 2988130 -  -4.9  -2.65279   TAATTTTTAAACCCA          TTTAGCGGCAA TCC TTGCCGCCACG          GTAAGGTTAGTCGCG  49 32
        thiL NONE
JN178_RS13285 2986525 .. 2986540 - -11.8  -5.06505   AAGCATATACAAAAA              GCCCGC AAAC GCGGGC               TTTTTTATATTAGGT 100 59
        pomA NONE
JN178_RS13260 2981313 .. 2981331 -  -8.8  -5.37043   ATTCTACACAAAAAA             CGGCGC TGAAAAT GCGCCG             TTTTTGATTGTGCTC 100 57
JN178_RS13230 NONE
JN178_RS13225 NONE
JN178_RS13220 2974481 .. 2974510 - -16.7  -4.42788   CTGAATTTTAGAAAA       CAAAAAACGCACT TAAT AGTGCGTTTTTTG        TTTGCCGAGGCTATC 100 36
        rluD NONE
        pgeF 2971592 .. 2971610 -  -3.2  -4.74504   ATCTCAACCTAAAAA             GAAAACAT AAA ATGTTTTT             AATTCGATGATGTAG  67 210
        clpB 2968951 .. 2968970 - -11.4  -5.05153   ATTGCAAAAAAGAAA            GGCGCTCC ATAA GAAGCGCC             TTTTTAATCAACTAA 100 54
         dld 2967151 .. 2967166 -  -2.6  -4.06384   TTGTAAGACGACAAA              CATGTT TTAC AACATA               GTTAGCAACACGCAC  55 27
        pssA 2961221 .. 2961236 - -10.4  -5.90231   ATAAATATAAAAAAA              GCGACC GTTC GGTCGC               TTTTTAAACTATTCG 100 64
JN178_RS13170 NONE
JN178_RS13165 2959121 .. 2959135 -    -5  -3.32844   GCCTTCAGTCTACAA               CCTGAA GCT TTCAAG               CTCAGATTTTCAAGT  54 44
JN178_RS13160 2958876 .. 2958916 -  -8.5  -5.21709   CTTTAGAGTAAAAAA  CCCTAATCAATGCTTACTG AAA CAGTAAATATTCATTAGGA  TTTAAATTCCGTTTT 100 142
JN178_RS13155 NONE
         rrf 2955472 .. 2955493 - -14.5  -5.77988   ACAGATACAAAAAAA           GCCCTTGTC GTTA GACAAGGGC            TTTTCGGAATTGGGA 100 40
JN178_RS13145 2954498 .. 2954510 -  -6.3  -3.53012   GTCGCCTGGCTTAAA                CTACT TAA AGTAG                CGGTTTACCTACTCA  60 34
JN178_RS13140 2953742 .. 2953761 -   -10  -5.48213   CATTCAAAACAAAAA            TGGCCATC GAAT GACGGCCA             TTTTAGCAAAGCATT 100 104
JN178_RS13135 NONE
JN178_RS13130 2951996 .. 2952011 -  -3.2  -3.57106   GTTAATCGAAAGCAA              GCGC GATTGACA GCGC               TAATGTGGTTGATCG  51 100
         apt NONE
        dnaX NONE
JN178_RS13115 2947884 .. 2947901 -  -8.4  -6.08342   TAAGAAACAAAAAAA             CGCTGG TAATAG CCAGCG              TCTTTTTAGATAAAA 100 99
JN178_RS13105 NONE
        recR NONE
        htpG 2943010 .. 2943024 -  -8.5  -5.65177   ACACGTATAAAAAAA               CGGGC GTTAA GCCCG               TTTTTACCTATTTAA 100 54
         adk 2942041 .. 2942057 - -10.8   -5.3236   ACAAGCCACAAAAAA              GGCCGC TTTAC GCGGCC              CTTTTCTACAACTTA 100 53
JN178_RS13085 2941473 .. 2941500 - -12.8  -4.22652   GTACATCATTTAAAA        TAAAACGCCCAC TTCC GTGGGCGTTTTC         ATATTTCACAACGTC 100 43
JN178_RS13070 2934674 .. 2934716 -   -12  -3.25652   CCCATTGAAGGAACA GCGTGTTGCCCTTTGCAATA CGT TTTTGCAGTGGTCAACACGC TCTGGCTAAGCAAAG  89 119
JN178_RS13020 2925156 .. 2925166 -  -5.4   -3.9693   GATGCACTTAAAGAA                 TTGC GAA GCAA                 ATTTGACTACATATT  63 428
JN178_RS12995 2922039 .. 2922054 -  -3.2  -3.96216   TTTTGATGTAAAGAA              TGGCGT GCGC ACGCGA               AGTGCGGTTGAATTT  55 39
JN178_RS12990 2920696 .. 2920710 -  -2.1  -2.55074   TGTAACTTCAACTTA               GGATT CACCT AACCC               AAATTTCAAACTGCC  39 15
JN178_RS12985 NONE
JN178_RS12980 2919062 .. 2919079 -  -8.5  -5.00616   GCTCGCCGCAAAAAA             GCACTTT TTTG AAAGTGC              AACAAGACGCGTTGC  90 44
JN178_RS12975 2918565 .. 2918598 - -11.9  -2.81509   GAAAATACTTAATGA     GTAGAGACCTTGCC TTTGCTT GGCAAGGTCTCT-C     TATCTTTCGAAATAC  86 25
JN178_RS12965 NONE
        tsaB 2915390 .. 2915407 -  -6.9  -2.66787   GCAATATTTATACCA             GCGCCGC TGTT ACGACGC              TGTGAATCGATATTA  59 41
JN178_RS12955 2914891 .. 2914907 -  -3.7  -3.25729   GACAACCACCACTAA              CGTTCTA TTA CAAAACG              ATAATTTACATAGCC  49 184
JN178_RS12950 2914035 .. 2914060 - -14.8   -3.3382   GCCATGACATACGAA         GAAGGCGGCA ATTATA TGCCGCCTTC          TTTTATTTGCTGTTA 100 38
JN178_RS12945 2913054 .. 2913066 -  -7.7  -3.62096   TTTTATGAGCGCAAA                GAGAC CGC GTCTC                ATATAACTGGTCTGA  70 89
        fadD 2911310 .. 2911325 - -11.8   -5.5353   CACAGTAATAAAAAA              GCCGGC TCAC GCCGGC               TTTAAAAAACTAATT 100 55
         rnd NONE
JN178_RS12930 NONE
JN178_RS12925 NONE
JN178_RS12920 NONE
JN178_RS12915 2907070 .. 2907096 -  -8.1  -3.09516   CCTGTCACTATCCAA         CGCATTGCA CACAAACAT TGCAATGCG         TTGTGTGAAGCTGGT  62 499
        fadR 2903699 .. 2903735 - -21.2  -3.09516   GCTTCTATGACTCAA    GTAACAAAAAAGCGCC TTAAC GGCGCTTTTTTGTTAC    TTGAGGGCGATGAGT 100 47
JN178_RS12890 2901302 .. 2901320 -  -8.8  -6.32976   AAAAAAATAAAAAAA             GCCCGAAA CAA TGTCGGGC             TTTTGTATTGATGTG 100 72
JN178_RS12885 2900768 .. 2900782 -  -7.2  -3.04144   GCCCTAGTCCCAACA               CATCAA GTG TTGATG               TGTTATATGATGTCA  61 78
JN178_RS12880 2899919 .. 2899934 -  -7.6  -6.08342   GAATAAATAAAAAAA              GCAAAC CTCT GTTTGC               TTTTTTATTTGATAA 100 59
JN178_RS12865 NONE
JN178_RS12860 2894682 .. 2894694 -  -4.8  -3.90291   ATTCCTTTAAGCAAA                GTCG AGGGG CGAC                TGGGTTTTGAAATCT  61 4
JN178_RS12855 2893057 .. 2893069 -  -3.4  -4.11216   CTTTCAGGGTCAAAA                CAAG CTATT CTTG                ATTACCACAAACCAC  57 179
JN178_RS12845 2890204 .. 2890214 -  -4.6  -4.83518   AACAAGAAGACAAAA                 CACC ACA GGCG                 CGTTTTAGAGAGTTT  73 392
JN178_RS12835 NONE
JN178_RS12830 2886648 .. 2886666 -  -7.4  -4.53303   TATTTTCATAGAAAA             TAGTAGCC TTC GGCTGCTA             GATAAAATAACCCCC  79 125
JN178_RS12820 2883452 .. 2883483 - -16.8  -3.90112   TGTTGGTGAACTAAA      TAAAGAAGCCGGTC AATT GACCAGCTTCTTTA       TATGGCGCTAGGTTG 100 60
JN178_RS12815 2880765 .. 2880780 -    -9  -4.72846   TTATAGAGCGAAAAA              GCCTGA TGAA TCAGGC               TTTTTTCGTTGTTTT  88 48
JN178_RS12805 NONE
JN178_RS12800 NONE
JN178_RS12795 2876127 .. 2876145 -  -2.4  -3.46285   TACTGCAAAGACCAA             GTGTATTA TCG TAACTCAC             TACCGAAAAAATGTC  46 72
JN178_RS12790 2875098 .. 2875124 -  -9.5  -4.89567   CTTTAAAACAGAAAA         CCAGTGGCTAT AGAAA ATAGGCACTGG         TTTTATCAATTTTAA  91 46
JN178_RS12785 NONE
JN178_RS12780 2871635 .. 2871654 -  -7.9  -5.15634   GAGTGCACCAAAAAA            CAGACGT ATCTAG ACGTCTG             TTTTTTGGTTGGGCA  89 54
JN178_RS12770 NONE
JN178_RS12765 2866146 .. 2866161 -    -9  -5.60689   CTACATAACAAAAAA              CCTCCT AAAT AGGAGG               TTTTCATGTCAATTC 100 73
JN178_RS12750 NONE
JN178_RS12745 2855069 .. 2855090 -  -7.2   -5.0916   TGTTCAATATAAAAA           GAGGGGGC AATTAA GCCCCCTT            GTCTATTTCATTTGT  85 55
JN178_RS12740 NONE
JN178_RS12735 NONE
JN178_RS12730 2850666 .. 2850678 -  -3.3  -3.14132   GCTTCCTTGTACCAA                TGTGC CTT GCTCA                TATTTACCTCTAGTG  46 35
JN178_RS12725 2848644 .. 2848686 - -10.2     -3.24   ATTAGTGGATAAAAC TCTGCAGCTGCTTTGAATA CCCTTT TATCCAAAGCAGCT-CAAA CATTCACTTTTACCT  78 108
JN178_RS12690 NONE
JN178_RS12685 NONE
JN178_RS12680 2839503 .. 2839531 -  -6.7  -2.61727   ATTTAGCATAACTCA        CTCGCAACATGTT AAT AACTTGTTGCATG        GTAACGCATTTTTTA  56 122
JN178_RS12675 2838016 .. 2838026 -  -8.2  -4.71223   CCAGAAGAGATAAAA                 GCGG TCA CCGC                 GAAATACCTGGACGT  85 188
JN178_RS12655 NONE
JN178_RS12650 NONE
JN178_RS12645 2830706 .. 2830717 -  -4.4  -3.75153   GTCGGCCAACTCAAA                CATG ACGG CATG                 GCAAGGGCAGCTACA  58 343
        fabB 2826083 .. 2826108 - -13.3  -5.50925   AACTAATACAAAAAA         GCGCGAAATGC AGAA GCATTGCGCGC          TTTTAGTTTCAATGT 100 85
JN178_RS12620 NONE
JN178_RS12615 NONE
JN178_RS12610 2821679 .. 2821693 -  -2.8  -3.55801   AGTAAGCCCGTCAAA               TGCAAT TTC ATAGCA               GTCCTATATGCCCTC  49 420
JN178_RS12605 NONE
        truA 2816799 .. 2816809 -  -3.2  -4.08216   GTATTTTCGTTAAAA                 CGTC GCA AACG                 GCCCGAAAGTGGAAC  57 85
JN178_RS12595 2815822 .. 2815838 -  -2.1  -4.15106   TAGCAACGGGTAAAA              CCGCATG AGG CTCGCAG              CAATGATAGCAAAAT  54 55
JN178_RS12590 NONE
        folC NONE
JN178_RS12580 2812691 .. 2812706 - -10.4  -5.28176   CGTACTTATAAAAAA              GGAGCG AAAA CGCTCC               TTTATTCCACTTTAA 100 27
JN178_RS12575 2812047 .. 2812058 -  -2.2  -2.53271   CTATTCCGACAATAC                CACA CATG TGCG                 TTACCTATTTCAAGC  39 35
        purF 2810482 .. 2810498 - -10.1  -5.88197   TTAAACATAAAAAAA              GCCGCTC TCG AAGCGGC              TTTTTGTTTCAATCT 100 54
JN178_RS12555 2807983 .. 2807994 -  -4.4   -3.6053   TGCGCGATAAACTAA                CGAA TTTC TTCG                 ATAATCGTCGACATT  55 79
JN178_RS12550 2806266 .. 2806288 -   -15  -3.70674   GGATGATTCAAAAGA           TAATGGCGGT AAA ACCGCCATTA           TTAAGTGTGATGTTT 100 60
JN178_RS12545 2802907 .. 2802929 -  -7.6  -3.68506   TAAGATGCAGGGAAA           CCGCACCGCC AAT GACGGTGAAG           TTGTGCGAAAGTGGG  67 294
JN178_RS12535 2801026 .. 2801048 -  -6.3  -3.97444   ATATTATCAATGAAA           CTCCTCCTC ACTGG AAAGAGGAG           CTTGATATTTTAGTT  66 121
JN178_RS12510 2796784 .. 2796800 -  -5.1  -4.76123   AAAGCAGCAATAAAA              CTGTTCA CAA TGAGCAG              GTGCTCGAGCGCATT  75 522
JN178_RS12480 2789456 .. 2789486 - -14.9  -2.88849   CGCATAGTAGGAAAC       CAAGAAAGCCCCT TTTGT AGGGGCTTTCTTA       TTTGGTTAAGGCGCG 100 54
JN178_RS12440 2779218 .. 2779242 - -14.4  -4.40732   TAAAGTATAAAATAA          GAAAGCCCAC AATAA GTGGGCTTTC          TCGACTCAAAATACA 100 51
JN178_RS12430 2777535 .. 2777547 -  -2.7  -3.92373   CATCTTATGCAGAAA                GAATC AGC AATTC                CAACAGATAAGCCTG  54 57
JN178_RS12410 2773027 .. 2773052 - -14.1   -4.5366   GCAAAAAATGCAAAA         GCCATGACAGG GAAA CCTATCATGGC          TTTTTTGTATACTTC 100 93
        apbC NONE
         dcd NONE
JN178_RS12390 2767435 .. 2767446 -  -4.4  -2.82529   GAGAATTAGCAATTA                GCTT ACTT AAGC                 GCTTAATTGCTAACC  48 69
JN178_RS12385 2767151 .. 2767178 -  -2.8   -4.3534   TCGCAACGATTAAAA        CAATTAAGAAAG ACAG CTTTGCTAACTG         TAAAAGAGCCGAAAT  58 145
JN178_RS12365 NONE
JN178_RS12360 2760154 .. 2760171 -  -6.9  -2.71101   GGGGGAAAGAAGGTA             TCACCGC CAGC GCGGTGG              TTGCTTGACCCTACG  59 129
JN178_RS12355 2759341 .. 2759351 -  -3.2  -2.70774   CACCTGAATCATAAG                 CGCA CTC TGCA                 TAACTTATCCTGCCT  43 39
JN178_RS12350 2758503 .. 2758515 -  -2.7  -4.79384   AGAATAAAACCAAAA                TCCTT TTT AAGAA                CATATCCCAACCGAT  65 127
JN178_RS12345 NONE
JN178_RS12340 NONE
JN178_RS12335 NONE
JN178_RS12330 NONE
JN178_RS12325 2753158 .. 2753172 -  -2.7  -5.02476   ACATCTGGCAAAAAA               GCGCC AACTA GGTGC               TTTTTAAACCCAACT  70 54
JN178_RS12300 2749168 .. 2749180 -  -5.5  -3.07935   ACGTTAGTGATTTAA                CCGTG CAA CACGA                CTTGCGCCTTCAACC  54 152
JN178_RS12260 2740039 .. 2740052 -  -5.2  -3.39844   TGCACAGTTTAAAGA               CGGG AGCTTG CCCG                AAGTGGTCTCTCAGG  54 508
JN178_RS12240 2735813 .. 2735830 - -12.7    -4.053   ATTACCGGATAGAAA             GGAGGGC CTAT GCCCTCC              TTTTCTATTTAAGCA 100 41
JN178_RS12225 NONE
JN178_RS12220 2731614 .. 2731632 -  -8.8  -3.35813   TGCTATGGCAATGAA             GCGGGCAA TTG TCGCCCAC             ACAAATTGTTACTAA  72 81
JN178_RS12215 2728877 .. 2728894 - -11.3  -5.60993   TTCTGCACAAAAAAA             GAGCACC AAAT GGTGCTC              TTTTTATTTACCTAA 100 59
JN178_RS12210 2724573 .. 2724585 -  -2.6   -2.5038   TCCAAAAATTAAATT                GCAC AACCA GCGC                GCGAGCACATGCCCA  41 6
JN178_RS12205 2723899 .. 2723927 - -15.4  -5.78622   TCAGCTTAAAAAAAA       GCCCGGT-GCTTG TTAT CAAGCCACCGGGC        TACCACTACACTGCA 100 48
JN178_RS12200 2722917 .. 2722929 -  -4.8  -2.79175   AACTCTTATTGAAAC                GGCA CCTGT TGCC                CGATATAGCCAGGTG  50 3
JN178_RS12185 2718540 .. 2718556 -  -5.1  -2.64616   CTTCCATGCACACTA              TCCACTT GTG AAGTGGC              CGCTTGACCACGTAT  48 164
JN178_RS12175 2716754 .. 2716768 -  -8.5  -5.83211   GATTAAAACAAAAAA               GGGGC TCGAG GCCCC               TTTTTCTATCAGTGA 100 51
JN178_RS12170 2716109 .. 2716142 - -16.9  -4.18908   AGAGCGCTAAAAGAA     TAAAAGCGAAGCCTG ACGT CAGGCTTCGCTTTTT      TTATTTAGATTGAAG 100 30
         zwf NONE
         pgl NONE
JN178_RS12145 NONE
JN178_RS12140 NONE
JN178_RS12135 2707514 .. 2707529 - -10.4  -5.85737   ATAGGAATAAAAAAA              CCTGCC AAAT GGCAGG               TTTTTTTGAAAATCA 100 53
        malQ 2702875 .. 2702890 -  -7.5  -4.72986   TACTCCTATTAAAAA              CCCGC ACTAAA GCGGG               TTTGTTTTAGTAAAG  84 118
        glgB 2700611 .. 2700622 -  -4.4  -3.14344   TATGTTCTGCAGCAA                GCAA ATTT TTGC                 GATGTTCGTTCACTT  50 72
        glgX 2698446 .. 2698461 -  -3.2  -2.68544   AACATCAACAATTTA              GTACGG TATG CCGTAT               TTGTCGCCAATGGTA  43 112
        gndA 2696725 .. 2696748 - -10.4  -5.32944   CTTACAATGAAAAAA          GGTGTACTTG CTGC CAAATACACC           TTTTAATGGTCTTGT 100 91
        msrB 2696193 .. 2696209 -  -9.4  -6.20267   CCAAAAACAAAAAAA              CCGCCT TTTAT AGGCGG              TTTTTTATATCATTT 100 112
JN178_RS12090 2693602 .. 2693618 -  -9.4   -5.5353   TACACCAATAAAAAA              CCGACC TATTG GGTCGG              TTTTTTGAACAATTT 100 79
JN178_RS12085 2692298 .. 2692314 - -12.3  -4.30978   TTGAACGCACTAAAA              GGCCTCT TAA AGAGGCC              TTTTTAACAGAAGCT  95 62
JN178_RS12080 2690441 .. 2690458 -  -2.7  -5.93252   TTTAAAAACAAAAAA             TGC-GTGC TAA GCACAACA             GAATCGAAGGCTTGA  90 85
JN178_RS12075 2689993 .. 2690005 -  -2.7    -3.445   TCATTTAGGAAAAAC                GCTTA ATG TAAAC                AATACGTGCGCGGTT  47 2
JN178_RS12070 NONE
JN178_RS12065 NONE
JN178_RS12060 2686608 .. 2686624 - -12.3  -4.75372   ATCACCGATGAAAAA              GCCAGAC ATT GTCTGGC              TTTTTTGTTCCTGTC 100 58
        yfbR 2685241 .. 2685296 -  -7.6  -3.42574   TGAATCTGAGCATAA TGCGTTGCGACCGCTGGAACATCG TGAAATAG CGGTGTTCCAGCGGTAACAAAAAA CAGCGCTAATTACTG  68 31
JN178_RS11990 2675493 .. 2675503 -  -3.2  -3.39353   ACATGAACATATTAA                 CTGG CGA CCAA                 TAACCACGTACTTGC  49 101
JN178_RS11975 2673638 .. 2673658 -  -6.9  -4.55997   AGAGACAAGAATAAA            GGAGAGT TGTTGAT ACTCTCC            TTTTTATTCGCAGAA  79 29
JN178_RS11960 2671692 .. 2671714 -   -12  -3.70364   CACAAAAGCACAGAA           GCGCACCGTC ATA AACGGTACGC           TTAATCAAAATTTCA  90 54
JN178_RS11955 NONE
JN178_RS11950 2670376 .. 2670416 -  -8.3  -3.60098   ACCGTTTAGTTTAAA  CGATAACGTAGACCTTGTT TTA AACGCCGTCCACGTCATCG  GGATCACCTTACAAA  73 34
JN178_RS11940 NONE
JN178_RS11935 2664255 .. 2664269 -  -2.8  -3.50853   TTCTTTGAATGACAA               GCTTTT TAA ACAAGC               GTTTACATTCTATGC  47 139
JN178_RS11930 2662447 .. 2662466 - -12.2  -5.81412   CTTAGTCAAAAAAAA            GGCTCTAC ATTT GTAGAGCC             TTTTTTAACCAAAGT 100 47
        recC NONE
        recB NONE
        recD 2651460 .. 2651472 -  -6.3  -2.64464   AACACCAATACCAAT                GATGA CAT TCATC                CAGAAGAACACGGAC  53 430
JN178_RS11900 2650561 .. 2650573 -  -4.7  -3.95852   ATTGCATTAATCAAA                CGCGC TAG GCGTG                CAAGTGCGTTTGTGC  61 64
JN178_RS11890 2648240 .. 2648258 -  -4.6   -3.8613   CGCAAAGATCAACAA             TAAAGGCA GAT TGGCTTTA             CACAATAAGAAATAA  57 23
JN178_RS11885 2647711 .. 2647750 -  -5.1  -2.62263   ATTGTCTTTAGAGCA  CGTTAACCTTTGCCGTA CGTTTT CACAGCAAAGCTCAACA   CGCTTTAGTTACATT  49 20
JN178_RS11880 NONE
JN178_RS11875 2646794 .. 2646827 - -12.6  -3.35798   ACCGCTTAGGCATAA     GCGTAACGCGTGCTA TTAGT TAGCACGCGT-ACAC     TTCTATTCGTCTTTT  95 28
JN178_RS11865 2644697 .. 2644710 -  -2.3  -2.61199   TAATGTGCAATGAAT               GTCGT AAAT ACGGC                GCGATAATTAAGAGA  40 52
        hmpA 2643377 .. 2643391 -  -3.6  -3.01712   TTTTGTTTTTTAACA               CCTATT AGT AATAGA               CGAGTTCGTAATAAC  47 100
JN178_RS11855 2642715 .. 2642735 - -11.2  -4.39287   CCAACTAGACCAAAA            GGGACAAG CTTTT CTTGTCCC            TTTTAATTTTTTAAG  90 36
JN178_RS11835 2637101 .. 2637123 - -13.5  -3.12005   TAGACAATGGCAACA           TGCCGCTAG TAACT CTAGCGGCA           TGTTCTTATAACGAT  95 66
        moaB NONE
        moaC NONE
JN178_RS11810 NONE
JN178_RS11805 NONE
        modA NONE
        modB NONE
JN178_RS11790 2630164 .. 2630178 -  -8.6  -2.57548   AAGAATATTATGAAC               GGTTAG AGG CTAACC               TACCAGCTGCCACCA  63 342
JN178_RS11780 2628178 .. 2628194 -  -2.3  -4.88388   ATAAGGTTACAAAAA              GAAAC TTCAAGT GTTTC              GAGGCATTCAGCGAC  66 82
JN178_RS11775 NONE
JN178_RS11770 2626376 .. 2626391 -  -4.6  -3.87815   TGTCACGTTCAGAAA              GCGCTT TTAA ACGCGC               TTTCTGAAATGGTGT  59 49
JN178_RS11760 NONE
JN178_RS11755 NONE
JN178_RS11750 2620494 .. 2620508 -  -2.7  -3.32997   TCCCTACAAATTTAA               TGCGC TAATT GCGCT               CATATTCTGTTATGC  46 35
JN178_RS11745 2619400 .. 2619426 - -11.7  -5.31275   GCTCAGCAGAAAAAA        GCCCGATG-GAA ATTA TTCACATCGGGC         TTTCTTGTTTTTCAC 100 97
JN178_RS11735 2615469 .. 2615502 - -11.1  -2.77779   GGAACAAACAAAACC     GATGAACGAGGCGAGT GCA AC-CGCCTCAATCATC     TTAACTTCTCTAACA  78 429
JN178_RS11715 NONE
JN178_RS11710 NONE
JN178_RS11705 2608221 .. 2608258 -  -5.5  -5.80248   CAAGATACAAAAAAA   GCCGAGC-GCTTAAGACA AAA CATCGTCAGCAGCCCGGC   TTATTCACGCGCTTA  95 74
JN178_RS11700 2606940 .. 2606965 -  -4.7  -3.61268   CATGCAACGGTCAAA         GCTTGATCCGCA CAG CGCTG-TCAAGC         AACGCAGTAGAAGTT  55 308
JN178_RS11690 2605827 .. 2605843 - -13.7  -3.75461   GAAAGCTGCACTAAA              GGCCCCT TCT AGGGGCC              TTTTTCTTTTTTACG 100 129
JN178_RS11680 2602687 .. 2602701 -  -5.7  -3.53012   TGCGGGTTTTGGAAA               CCGTA TCTTG TACGG               GAGTGATCAGATGGT  57 198
JN178_RS11660 2599742 .. 2599757 - -10.4   -3.5511   CTGCAGTGACAAATA              GCGACC TCCG GGTCGC               TTTTTTATTTTAATT  81 35
JN178_RS11630 2592849 .. 2592879 -  -7.6  -3.59979   CGCCGTCATTTTAAA       GACCAAAAGAGGCA TCA CGTTTCTTTTGGTC       TCTTAGTTTCTCAGC  70 50
JN178_RS11615 2588404 .. 2588425 - -13.1  -5.63504   AAGTTTACAAAAAAA           CCGACCTTA TCAT TAAGGTCGG            TTTTATCTTACAAAC 100 58
JN178_RS11610 2587869 .. 2587879 -  -3.2  -3.71552   ACTTTACTAACACAA                 GTGC TTA ACAC                 CGAAATATTTCAAAT  53 134
JN178_RS11605 2587668 .. 2587682 -  -2.1  -3.57144   GTCTGTACGTTTAAA               CGTGT TGTTT ACACA               TTTAAAAAATTCACC  48 51
JN178_RS11600 2587552 .. 2587567 - -10.4  -6.02919   GCAGAAACAAAAAAA              CCCAGC AAAT GCTGGG               TTCTTAATGTGGTTG 100 35
JN178_RS11585 2585009 .. 2585026 -  -9.9  -5.46698   GGCAAAACGAAAAAA             GGAAGGT AAAA ACCTTCC              TCCTAGTAATTCATC 100 36
JN178_RS11580 2583988 .. 2583999 -  -5.8  -3.09635   ACTTGCATCAGTTAA                CACC GCTG GGTG                 TACCTTGAAAGTTGC  57 6
JN178_RS11575 NONE
JN178_RS11570 2582639 .. 2582654 - -10.4  -5.79595   GCTGAAAAGAAAAAA              CCCAGC AAAT GCTGGG               TTCTTAATGTGGTTG 100 142
JN178_RS11565 NONE
JN178_RS11560 2577754 .. 2577771 -  -9.8  -5.29716   TTAATACAACAAAAA             GCCCCG GACTAG CGGGGC              TTTTATTAAAATTCT 100 229
        rimP 2577213 .. 2577225 -  -3.3  -3.17075   GTTCCGTTAATCGAA                CGTGG GAA CAACG                TTACCTTTTTCGATA  46 4
        nusA NONE
        infB 2572983 .. 2573001 -  -9.5   -5.1104   AAATACAGACAAAAA             CGGGAGC ACTCG GCCCCCG             TTTTTCACATGCCGA  91 55
        rbfA NONE
        truB 2571507 .. 2571530 -  -7.4  -4.56729   AGTAAAAGATGAAAA          GCTCGCTCAC ACGT ACAAGCGAGC           TTTGTAAAGCGTTAA  79 37
JN178_RS11530 2570019 .. 2570032 -  -5.2  -3.80114   CACTAATTCAGCAAA               GCGG AATGAG CCGC                GTATTATAATGACGT  60 74
        rpsO 2569671 .. 2569685 - -12.8  -5.60993   TCGCGCATAAAAAAA               GCGCCC ATT GGGCGC               TTTTCTTGAAACCTA 100 44
JN178_RS11500 2562597 .. 2562611 -  -2.8  -3.64703   CCTCTGTTACTGAAA               TCAGAA AAT TTCAGA               CCCCATAAGCTTAAC  49 177
JN178_RS11495 2560809 .. 2560834 - -10.4  -4.45945   AGGTAGTAAGCAAAA         GGCCCACGCA TTATCT TGAGTGGGCC          TTTGTACTTTAGAGC  89 57
        ahpC 2556328 .. 2556345 - -12.7  -3.40867   GGATTGATTAATGAA             GGAGCGG ATAC CCGCTCC              TAGTATGGAATATGC  95 89
        ahpF 2554600 .. 2554621 -    -8  -5.90231   AGAAACATAAAAAAA           CCGAGTGC GGTTAA ACACTCGG            CTTTTCTTTTTTTCT 100 55
JN178_RS11470 2553540 .. 2553566 - -12.6   -4.0865   CCTAACAAAACACAA         TACAAATGATAA CCC TTATCATTTGTA         TTTTATAAACTAGGA 100 141
JN178_RS11465 NONE
JN178_RS11460 NONE
JN178_RS11455 2551199 .. 2551240 - -12.5  -3.17075   GTCTTGCCAATCCAA TGCCAAGCACCACC-CAAAC TAT GTTTATGGTGGTACTTGGAA GCAAAAGAAACGTAA  91 41
JN178_RS11445 NONE
JN178_RS11440 2548656 .. 2548670 -  -8.5    -5.626   CATTTGATAAAAAAA               GCGCC GTTGA GGCGC               TTTTTTATGGGGCTT 100 72
JN178_RS11430 2545476 .. 2545486 -  -2.6  -5.08255   ACTTTCAAAATAAAA                 TAAT GCG ATTA                 CGCTATTTGGCAGCG  70 28
JN178_RS11420 2542572 .. 2542582 -  -3.2  -4.09685   TCTTACCCCTTAAAA                 CGCA TAC TGCA                 TGGTAACTTGTGCAT  57 9
JN178_RS11415 NONE
JN178_RS11410 2539109 .. 2539129 -  -2.6  -2.87239   AAGAGGTAAACATCA           GTAGCGC-AC TCC GTAGCGCT-C           ATACCAAGCATTACG  42 2
JN178_RS11405 NONE
JN178_RS11400 NONE
JN178_RS11395 2536064 .. 2536083 -  -4.4  -2.66106   TAGTCTAATAATTGA            CGTATTATC CAT GATAA-ACG            TTACCTACTACCGTT  47 26
JN178_RS11390 2535082 .. 2535092 -  -2.4  -4.28488   ATTGAAAGAGATAAA                 GCAG GCT CAGC                 AAGATTTCGAATTGA  57 211
JN178_RS11375 NONE
JN178_RS11370 2531402 .. 2531413 -  -2.2  -3.56273   GCCATTACCATAGAA                GCCT TGGC AGAC                 CTGGTGTTTTGTAGT  47 249
JN178_RS11350 2527454 .. 2527472 - -14.6  -4.90296   AAAATGTCAGAAAAA             GCGCAGCA TAA TGCTGCGC             TTTTTTGCTTTTATT 100 54
JN178_RS11315 2518273 .. 2518294 - -10.1  -2.62667   CCAATTCCTAAAGAG           CCCCGTACC GCAA GGTATGGGG            TTTTTCTTTATGCCA  74 33
JN178_RS11305 2516525 .. 2516543 - -10.3  -3.90738   GAAAGAATGATGAAA             CACAGCG TGTAG CGCTGTG             TTCTTAACCCACATC  85 29
JN178_RS11295 NONE
JN178_RS11290 2515034 .. 2515051 -  -5.5  -5.45652   ACCTTTAATAAAAAA             CGGCC GTTTCATA GGCCG              TTTTTTTATTGTTAA  83 75
JN178_RS11275 2509409 .. 2509431 -   -12   -5.3236   ATAAGGCATAAAAAA           CGGCAAACCC TGC GAGTTCGCCG           TTTTCTTAACTAAAC 100 75
JN178_RS11270 NONE
JN178_RS11265 2506067 .. 2506077 -    -4  -4.85599   TCGACGTTACAAAAA                 CAAA TTG TTTG                 GCTTAACCATCGCAG  71 309
        ppsA 2502788 .. 2502804 - -10.9  -6.02919   TTATAAACAAAAAAA              GAGACCT TTT AGGTCTC              TTTTTACCAATTAAG 100 59
JN178_RS11250 2502326 .. 2502345 - -10.7  -4.58773   TGGATGAAATGAAAA            GGGAGGC TTAGAG GCCTCCC             TTTTTTATCTATAAA  89 132
JN178_RS11230 2497591 .. 2497621 -  -5.4  -3.06796   CCTGAGGCCAGCGAA       TTTGACGAGCAGGA TGA TTCTGCTTGTCACA       TACTTATTTTAAGTG  52 363
JN178_RS11190 2488776 .. 2488799 - -13.2  -5.63517   GTTGGAAATAAAAAA          CCCTGCAGTT TTTC AACCGCAGGG           TTTTCATAGTTTTTT 100 115
        clpS NONE
        clpA 2485352 .. 2485373 - -15.9  -5.33866   GAAATGCACAAAAAA           GGGGCTAGC AAAC GCTAGCCCC            TTTTATACATTTGCA 100 53
JN178_RS11150 2481140 .. 2481152 -  -6.9  -3.90922   ACGCTCTGGAAAGAA                CGCAG GTA CCGCG                TTTTTACAGCAAAAC  68 429
JN178_RS11130 2478041 .. 2478058 -  -7.7  -5.55769   CTGCACAATAAAAAA             GACCAGA AATT TCCGGTC              TTTATCAAGGTTTAT 100 41
JN178_RS11125 2477314 .. 2477335 - -10.1  -5.21709   CGTGACAGTAAAAAA           CACGCCGCT TAAG AGCGGCGCA            CTTTGCAACTAAAAC 100 56
JN178_RS11030 2457426 .. 2457438 -  -2.7  -2.87564   TTACTTTTGCACACA                TTACA TTG TGCAA                TAATACGCACTTTGA  42 55
JN178_RS11025 2456534 .. 2456549 - -11.8  -5.79595   TCGTAAAATAAAAAA              CCCGCC ATCT GGCGGG               TTTTACATAATTAAT 100 52
        rlmE 2454583 .. 2454597 -    -5  -4.08689   TATTGAACAACCAAA               CTCGTT CGC AACGAA               AACCGCTTATCCCAA  63 47
        ftsH 2452526 .. 2452556 - -13.5  -3.99405   CTAATTCAGTACAAA       TAAAAAACGCCAG ATAAA CTGGCGTTTTTCA       CTATTTAGGTGTGGT 100 40
        folP NONE
        glmM NONE
JN178_RS10990 NONE
        secG NONE
JN178_RS10980 2448891 .. 2448908 - -11.3  -6.08342   CAACAAACAAAAAAA             CCGTAGC ATTA GCTACGG              TTTTTTAATTGGTGC 100 35
JN178_RS10970 2444364 .. 2444380 -  -2.3  -4.81863   AAATCGACAATAAAA              TACGAAT AAT ATCCATA              GTAAATTCCTTGTTG  64 257
JN178_RS10965 2444118 .. 2444136 -  -6.7   -5.1167   AATTGAATACAAAAA             TGCCAGC TAAAC ACTGGCA             TTTTTTTATAATCAA  83 110
JN178_RS10945 NONE
JN178_RS10940 2438670 .. 2438683 -  -3.8  -2.79749   GACCGGCAATAGAAG               GCGA AGAGTA TCGC                TGGATGGACGTGCAC  45 277
JN178_RS10925 2435677 .. 2435691 -  -4.4  -3.64487   TTAGAGCTCTAACAA               TATAAA GGT TTTATA               ATTTATTTCAAGTTC  55 263
        putP NONE
        proB NONE
JN178_RS10910 2431517 .. 2431536 - -11.4  -5.65678   ATAAAACATAAAAAA            GCGCCGAC TACT GTCAGCGC             TTTGCATTATGAAGC 100 116
JN178_RS10905 2430337 .. 2430347 -  -8.2  -2.71364   TCAGCGCTGTAATCA                 CGCC AAA GGCG                 CAAAAACCCCAGAAG  60 183
         pnp 2427450 .. 2427478 - -14.7  -3.48026   TTTAAACCCAAAAAC        GAAAAAAGGGAGC CAA GCTCCCTTTTTAC        TTATATGTGACTAAC 100 63
JN178_RS10890 2427023 .. 2427038 - -10.4  -5.56264   GCCAAACACAAAAAA              GCCAGC TTTC GCTGGC               TTCTTAAACACATAG 100 47
JN178_RS10885 2426296 .. 2426311 - -10.4  -2.57132   TGGGTGGTGTATAAC              GCCCCA ACTT TGGGGC               ACAAATACATGGGCT  76 131
JN178_RS10880 2425396 .. 2425414 -  -4.4  -3.09635   ACTTGTAGCACCTAA             CGGCCCGC ATA ACGGGCAA             AAATACGTAGGCTAT  50 112
JN178_RS10875 2424919 .. 2424970 - -12.3     -3.94   CTAACTTTTAAATAA GGGGCGCAGACATGTGGGCTA TAATGCGAAG CAGCCCACGTGTATGCGTCCC AGCGAACGAAGTGAG  95 69
JN178_RS10870 2423957 .. 2423968 -  -7.2  -2.57344   CATGTGGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGTATGCGTC  59 74
JN178_RS10865 2422970 .. 2422981 -    -3  -3.41075   ATACCAGGCAAAAAG                TGAA CTGG TTCA                 AAGTATGCCGGGCAT  46 428
JN178_RS10855 2421464 .. 2421474 -  -2.4  -3.31461   GACGTAGCTGCATAA                 TCGC GAT GCGC                 CGCTGCGTTACTGTG  45 87
JN178_RS10850 2420946 .. 2420977 -  -2.3  -3.89501   TAACAGGGGCAGAAA      CATGTAGGCTA AAATGCGAAG CAGCCTGCATG       CTTGTGTCCAAGCAG  52 83
JN178_RS10845 2420420 .. 2420448 -  -2.3  -2.87881   TAAGGGGCGCAGACA        CGAGGGCGA AAATTGCGAAG CCGCCCGCG        TAATTGTGACCCAGT  41 70
JN178_RS10840 NONE
JN178_RS10835 2419278 .. 2419290 -  -6.2  -3.11291   TTTAGAAGCCTAACA                CCCC AAGAA GGGG                CAATTACTTGTGGGC  57 107
JN178_RS10830 2418752 .. 2418803 -  -9.3  -3.94402   ATAACTTTTAAATAA GGGGCGCAGGCGCGTGGGCTA TAATGCGAAG CAGCCCACGTGTATGCGTCCC AGTGAGCGAAATCGA  81 58
JN178_RS10825 2418303 .. 2418315 -  -6.2  -3.01712   GCTTTGCTCTTAACA                CCCC GCTTA GGGG                CAAAAATAAGTGGGC  56 116
JN178_RS10820 NONE
JN178_RS10815 2417006 .. 2417016 -    -4  -5.05037   TAATATAAAAATAAA                 TAGT CGC ACTA                 CGATGAATCCTTACT  73 83
JN178_RS10810 NONE
JN178_RS10805 2416192 .. 2416214 -  -3.3  -3.21726   GGGCATAATAGCGAA           GCGGCCCAA TGTGC TTGCGCCTC           AGCTAACGAAGTGAG  46 57
JN178_RS10800 NONE
JN178_RS10795 NONE
JN178_RS10790 2414233 .. 2414291 -  -3.9  -3.06059   TAACTCACAAATAAG CGGCAATAACACGTAGGCTTAAATG GGAGCGAAG CGACTGAGCCTACGTGTTATTGTCC CGTTGAGCGCTAGCG  48 481
JN178_RS10785 NONE
JN178_RS10780 NONE
JN178_RS10775 2412567 .. 2412583 -  -3.6  -3.19003   ATAATACTGCACTAA              CGCCGA AGCCA CCGACG              TGTTTAATCCCCAGC  48 59
JN178_RS10770 NONE
JN178_RS10765 NONE
JN178_RS10760 NONE
JN178_RS10755 2409138 .. 2409148 -    -4  -3.82218   ATTTATACCATCAAA                 GTAT TTA ATAC                 CGATCACTTAAGTAC  55 87
JN178_RS10750 NONE
JN178_RS10745 NONE
JN178_RS10740 2406887 .. 2406911 - -11.6  -4.20368   TTAGCTTAAGAGAAA          CAAGGTGATA TTTGC TATCACCTTG          TTTTTCCTTTCCTTA  93 44
        nlpI NONE
JN178_RS10720 2402817 .. 2402829 -  -4.1   -2.9648   AAAACCAACATTACA                TCAGC AGC GCTAA                CTTTTGGTACTTTCT  47 154
         smc NONE
        zipA 2396870 .. 2396890 - -13.3  -5.01811   TTAGTAAACTAAAAA            GGACCTGGC TAA GCCAAGTCC            TCCGTTCGGTATCGT 100 122
        ligA 2394658 .. 2394680 - -11.4  -5.73978   AGCAGAAATAAAAAA           GCGTACCATT TAA AATGATACGC           TTTTTTTGATTAAGC 100 67
JN178_RS10690 2391218 .. 2391230 -  -4.1  -3.14581   TAATTCACTAATATA                GCAAC AAA ATTGC                TTATAGTTTCACCAT  48 167
        msbA NONE
JN178_RS10680 NONE
JN178_RS10675 NONE
        kdsB NONE
JN178_RS10665 2386562 .. 2386581 - -13.6  -3.88823   AATAGTAAACGGAAA            GAGGCGCT AGAA AGCGCCTC             TTTTTTATTTTTATT 100 53
JN178_RS10655 2383193 .. 2383211 -    -6  -3.25088   TTTTAAAGGTATTAA             TTGCGAAG ATG CTCCACAA             TAAAATCTACCGCTT  58 3
JN178_RS10650 2382635 .. 2382648 -  -6.7  -3.37879   ACTAACGCCAATTAA               GACGA CACA TCGTC                ATCTTTGGGGTGAGG  61 8
        lhgO NONE
JN178_RS10630 NONE
JN178_RS10625 2377897 .. 2377914 -  -2.7  -3.55622   GTCAATGCGTTCAAA             GTGCATAG GTG CCATGC-C             TTTCCTTAGGATGCG  49 99
JN178_RS10620 2377269 .. 2377289 -  -5.3  -4.23794   TTAATCGAATAGAAA            GGGCGTGTT GTT AATTCGCCC            TTCGCTAAACACTAC  68 129
        sdhC NONE
        sdhD NONE
        sdhA NONE
JN178_RS10590 2371421 .. 2371442 - -13.1  -5.80248   GAATATATAAAAAAA           TAGCCATCC TGTT GGATGGCTA            TTTAGAGCATCGCTA 100 74
        sucA NONE
        odhB 2366861 .. 2366874 -  -5.9  -4.70583   TTTAGTAAGACAAAA               GCCGC ATAT GCGAC                TTGATTATTTAGACT  77 132
        sucC NONE
        sucD 2364746 .. 2364762 - -13.7    -5.252   CATGCCTACAAAAAA              GCCCGCT TAA AGCGGGC              TTTTAACATCTTGCT 100 53
JN178_RS10565 NONE
JN178_RS10560 NONE
JN178_RS10555 2361946 .. 2361956 -  -4.6  -4.37658   AATTGTTTCATAAAA                 CGGG TGT CCCA                 TACGGTTATAGTTGT  66 339
JN178_RS10550 2358963 .. 2358990 -  -9.2  -5.60689   CTATACAACAAAAAA        GCCCCAATAC-GT TTT ACTGTCTTGGGGC        TTTGATACTACATAA 100 109
JN178_RS10545 NONE
JN178_RS10540 2355670 .. 2355683 -  -5.3   -3.5032   GTTTCACACCAAATA               GTACA GTTT TGTAC                AAAAAGAGAGCAACG  57 243
JN178_RS10535 NONE
JN178_RS10530 2348084 .. 2348101 - -12.7  -5.92337   ACATACCAAAAAAAA             CCGCGGT AAAG ACCGCGG              TTTTTATAGTCAGTA 100 54
JN178_RS10525 2346651 .. 2346669 -  -3.1  -3.71552   AGTCGAGCAACACAA             TAGCGGT GTTCG AACGCTA             GTATTTTGTTTATCG  53 475
JN178_RS10520 NONE
JN178_RS10515 2344926 .. 2344943 -  -5.7  -3.14132   TGCGCCTTTTATGAA             CAAAAAA TAAA TTTTTTG              TAACAAAATCTAAAG  54 67
JN178_RS10510 2341807 .. 2341826 - -13.6  -5.80003   TCAAGAAACAAAAAA            GCCACCTC AAAT GAGGTGGC             TGTGTCCGGGGAGAA 100 46
JN178_RS10505 2339730 .. 2339749 - -13.6  -4.18197   AGGCTTCATTGAAAA            GGCCAGGT AATT ACCTGGCC             TTGACCGAATCATTT 100 58
JN178_RS10500 NONE
JN178_RS10495 NONE
JN178_RS10490 2334409 .. 2334426 -  -5.5  -5.87996   TAATCAATAAAAAAA             GCGCC ATTAATTA GGCGC              TTTTTAGTTTCCGGT 100 59
        glnS 2331367 .. 2331386 -  -9.3  -5.18726   GCCGCACAATAAAAA            GCCGCTA ATAAAA TAGCGGC             TTTTTGATTTTTAAC 100 56
JN178_RS10470 2327621 .. 2327636 - -11.8  -5.28176   TTTACGTACAAAAAA              GCCGGC AAAC GCCGGC               TTTTAATTTACACTA 100 50
JN178_RS10465 2324861 .. 2324896 - -14.9   -4.7173   GACTATACGTAAAAA    GTAACCTGGTTAAGC GACATG GCTTATCCAGGTTAC     TGATGCATTTACGTA 100 56
        sohB 2323755 .. 2323774 -  -7.8  -2.57132   GTTGTTTTCGAGAAC            GAGCGGTA AGGC TTCCGCTC             AACTCTAATTAAAAC  62 34
JN178_RS10455 2323055 .. 2323071 - -12.3   -4.3351   ATAAAATGTAAGAAA              CGCACCT AAC AGGTGCG              TTTTTTTATGCTGGA  95 31
JN178_RS10445 NONE
JN178_RS10440 2320521 .. 2320534 -  -3.9  -3.61398   GTTTCCCTTGAAGAA               CTATT GAAT AATAG                CAACATCGTTACCCT  53 413
JN178_RS10425 2318321 .. 2318333 -  -6.2  -4.42806   TCAGCGCCAAACAAA                GCGC GTTTG GCGC                AGTTATCTGAACTAG  73 91
JN178_RS10415 NONE
JN178_RS10410 2314124 .. 2314151 - -10.7   -4.7373   TGAGTCTACCAAAAA        CAAAGCCCTAG TGACAG CTAGGGCTTTA         GTCCTTATCTAACCG  91 72
JN178_RS10405 NONE
JN178_RS10400 2312618 .. 2312639 -  -7.9  -5.52347   AACAAAACTAAAAAA           TAGGCGCCA ACAC CGGCGCCTT            TTTTATTATCAATTT 100 67
        yejK NONE
JN178_RS10380 NONE
JN178_RS10375 2307612 .. 2307638 - -13.8  -4.06179   TTGAAAAGGTATAAA         GAAAGGGGCTTA TAT TTAGCCCCTTTC         TTTTACGTTTTTCGT 100 104
JN178_RS10365 NONE
JN178_RS10360 2304318 .. 2304332 -  -7.2  -3.64703   CTGGTCGCAGGTAAA               TGACAA TCT TTGTCA               TTTACCTGCGAGATA  67 59
JN178_RS10355 NONE
JN178_RS10350 2302267 .. 2302285 -  -5.3  -5.81412   TTTATGCAAAAAAAA             CGTACTT TTGAG AAGCACG             CTTTTGATATTATCA  95 55
JN178_RS10345 2301338 .. 2301349 -  -2.2  -4.35483   TGCCATTAGAAGAAA                CATG GAAA CACG                 CTAAGCCTTTAAACG  59 176
JN178_RS10335 2299018 .. 2299029 -  -2.2   -4.8622   CTCCTTAACTAAAAA                CACC TGTT GATG                 CTGAACCGACTTATT  66 356
JN178_RS10330 2298031 .. 2298077 -  -8.9  -2.78816   TGACTGTTCATCATA CTTCTCTGCTTATAAGAGGCA ACGAG TGCCTCCTATAAGCTAAAAAT TAACCTAAGGTACGG  68 25
JN178_RS10325 2296767 .. 2296793 -  -7.3  -3.86322   AACAAGATTATGAAA         GAGCCAAAGCA TCGTT TGCTCTAGCCC         AAGGCTATGCCCCTG  70 290
JN178_RS10315 2294560 .. 2294570 -  -6.8  -4.63928   AGACCAGTGCAAAAA                 TGCG GCG CGCA                 ATATAGCAGATTCAC  77 132
JN178_RS10310 NONE
JN178_RS10305 2293166 .. 2293182 -  -6.5  -5.61689   AAAATTAATAAAAAA              GCGAGCC CTG AACTCGC              TTTTTAGTTCTATAT  90 62
JN178_RS10285 2289060 .. 2289074 -  -2.8  -2.61695   CTCAGTTTGAAATAG               TGTTCG AAA CTAACA               ATGCCGTCGTACATC  40 254
        cysB 2285583 .. 2285618 - -16.5  -4.25104   TTGTCCCCACCAAAA    TTATAAAAAAGGGGC AATTAA GCCCCTTTTTTATAA     TCTAAATTTTATCGT 100 40
JN178_RS10245 2280188 .. 2280206 -  -8.9  -5.48623   AAACACAAATAAAAA             CAGGTAC TCAAG GTACCTG             TTTATAATCTATTTC 100 74
        rmuC 2278635 .. 2278650 - -11.8  -3.16647   CTTAGCTACTAAAAG              GGCCGC AACT GCGGCC               TTTTTTTTCAACCTG  83 115
JN178_RS10230 NONE
JN178_RS10225 NONE
JN178_RS10220 2270183 .. 2270206 - -10.4  -5.71712   TGGTATACAAAAAAA          GGCTAATAAC CAAT GTCATTAGCC           TTTACGTATTTCAGT 100 50
JN178_RS10215 NONE
JN178_RS10210 NONE
        tesB NONE
JN178_RS10200 2265764 .. 2265791 -  -6.2  -2.74605   TCCCTGTAAAAGTTA        GCGCACGGCTCA GCAA TGAGCCATTCCC         CTAGGCCCGGAACGT  54 123
JN178_RS10195 2264233 .. 2264250 -  -8.4  -5.16237   AAGGCCATTAAAAAA             GCCAGC ATCTAG GCTGGC              TTAAAAATAATCATA  91 52
JN178_RS10190 2263287 .. 2263303 -    -8  -3.96624   CATGCTCACCAGAAA              CCAAGC TTTGC GCTTGG              CTGACTAACTGGTTA  74 70
JN178_RS10185 NONE
JN178_RS10180 NONE
        proQ NONE
         prc 2259814 .. 2259850 - -16.7    -3.002   AGTATTTTATAGACA    CAAAAAAAGGGCTGGCC ATA GACCAGCCCTTTCTCCG    TCACCACTAATTTCT 100 32
JN178_RS10165 NONE
        nhaC NONE
        pepN NONE
JN178_RS10150 2253858 .. 2253878 -  -4.1   -3.2396   AACCATTACGATTAA            CAAAATCAT TAC ATCATTTTG            CCAGAACCGCAAGAA  49 200
JN178_RS10145 NONE
JN178_RS10140 2250314 .. 2250333 - -13.6  -4.96848   GTCTGTATACAAAAA            CGGTTGGC AAGT GCCAACCG             TTTGTTGTTCAAGGC 100 43
JN178_RS10135 NONE
JN178_RS10130 2246848 .. 2246861 -  -9.5   -5.9663   AAACACCAAAAAAAA               GGGCC TAAA GGCCC                TTTTTTATGCGTAGC 100 55
JN178_RS10125 2241817 .. 2241833 - -12.3  -5.59879   CACAAATATAAAAAA              GCCCTGT TCA ACAGGGC              TTAAATTATTAAGGT 100 50
        pyrD 2240784 .. 2240798 -  -4.2  -3.43492   TCAGATGTATTATAA               CGCGTT TAC AATGCG               TTTAACGAGTGACGG  53 5
       rlmKL NONE
JN178_RS10110 NONE
JN178_RS10105 NONE
JN178_RS10100 2234635 .. 2234650 -    -9  -6.24157   AGGCATAAAAAAAAA              CCGCAT CAAG ATGCGG               TTTTTTACACAATCA 100 47
         rmf 2234154 .. 2234169 - -10.4  -5.47431   TTAAGACAGAAAAAA              GCCCCT TTGC AGGGGC               TCTTCCTTTTGCTTA 100 64
JN178_RS10085 2233098 .. 2233121 -  -5.3  -3.74381   ATTCAATGCAAAATA          GTCCAAGCC GCACAT GGCTTAAAC           AAAAACAAGCATCAC  62 86
JN178_RS10070 NONE
JN178_RS10065 NONE
JN178_RS10060 2226520 .. 2226531 -  -5.8  -3.18681   GTGGAAGGCTACGAA                CAGC GTGC GCTG                 GGTAACTCTCGTGGT  54 519
JN178_RS10050 2222827 .. 2222839 -  -6.3  -3.42283   GAAGTCATGCAAAGA                CCTTT GTA AAAGG                ATCAAATTACCGCGC  60 127
JN178_RS10045 NONE
JN178_RS10040 2219073 .. 2219092 -  -4.2  -3.39449   GTTCATCAATACTAA            GCATGTGA TTCT CCACAAGC             GTGTTCGAAAAAGGT  53 2
JN178_RS10035 NONE
JN178_RS10030 NONE
JN178_RS10025 NONE
JN178_RS10020 2215166 .. 2215176 -  -6.8  -2.95832   TAAAAAACGAGGATA                 GCGT TTT ACGC                 CACATAGTGACCTCC  58 20
JN178_RS10015 NONE
JN178_RS10010 2212052 .. 2212075 -  -5.4  -4.22375   ACTGAAGATAAAGAA          GGAAAACA CATTATCT TGTTTTCC           TTTTTAAGCGCATTT  68 150
JN178_RS10005 NONE
JN178_RS10000 2209831 .. 2209862 - -13.8   -3.3353   TGGTCTAGAAATAGA      CATCGTGTTACCGC GCTA GCGGTAACACATTG       GTTGACTGGAGAAAT 100 47
JN178_RS09985 2206225 .. 2206235 -  -5.4  -3.29461   GAAGGCGTTTTACAA                 CGTA GAT TACG                 TGACCTAGATAGGAG  56 131
JN178_RS09980 2203832 .. 2203842 -  -4.6  -2.59927   AACTTTTATAAGTTA                 CGCG TAA CGCA                 TCTGAAATGGGTTAT  47 54
JN178_RS09975 2203189 .. 2203215 - -12.3  -3.15699   ATTCACGTATTAATA         GGCCGAGCCAA AGATA TTGGCTCGGCT         GCAGTATTCGTAAGT  86 91
JN178_RS09960 2201685 .. 2201704 - -13.6  -5.18297   GAAGAAGAAACAAAA            GCGGTGTC CTAA GACACCGC             TAGTTTTCAAGCTTT 100 46
JN178_RS09950 NONE
         bfr NONE
         bfr 2197080 .. 2197099 -   -10  -5.41746   AACGTGTTAAAAAAA            CGGCTAGC CTAT GCTAACCG             TTTTTCATTTATTCT 100 53
        ccoN NONE
        ccoO NONE
JN178_RS09920 NONE
        ccoP 2193119 .. 2193136 - -11.3  -5.60993   TTTCTCATAAAAAAA             GCCTCGT GGTA ACGAGGC              TTTTTGCGATATTTA 100 54
JN178_RS09910 NONE
        cadA 2190028 .. 2190045 -  -6.3  -2.64274   AGGTCTTCAAACTGA             TTGGACT TTAC AGCCCAA              AAGAAAATAACGATA  54 95
JN178_RS09895 NONE
         fnr 2188344 .. 2188360 - -12.3  -5.80003   TCAATAAATAAAAAA              GGCGCTT ACA AAGCGCC              AATCTTAATCTTGTT 100 62
        uspE 2187167 .. 2187189 -  -3.4  -4.63218   TGGTTTGTAATAAAA           GGCACATTAT ACA ATAAAGCACC           TTTTCGAAACCATGC  64 139
        ttcA NONE
JN178_RS09875 NONE
JN178_RS09830 2178004 .. 2178025 -  -6.7  -4.03234   TGTGGCGGATAGAAA           CGATA-CCTA GTG TAGGATATCG           TTTCGTAGAATTAAG  70 166
JN178_RS09820 2176926 .. 2176938 -  -9.1  -3.85698   TTCCGCCTCCACAAA                GCTGC AAC GCAGC                ATCAGGTTCTACGCC  76 181
JN178_RS09750 NONE
JN178_RS09725 2161447 .. 2161464 -  -8.4  -5.42975   CCATACAAACAAAAA             CACCCC GATTAA GGGGTG              TTTATTATCAAACCT 100 52
        tusD NONE
JN178_RS09715 NONE
JN178_RS09710 NONE
JN178_RS09705 2159952 .. 2159965 -  -5.3  -5.24989   CGAGATACGAAAAAA               GGTTA TTCG TAACC                AATTGGTTATGCGTA  81 92
         ald 2148037 .. 2148063 - -10.3  -5.75478   AACCACATAAAAAAA        GCTCGGA-ATGT GAAA ACATATCCGAGC         TTTTTTTTAGTTGAG 100 77
        ubiG 2133953 .. 2133978 - -10.5  -2.91507   AATACACTGTATATA         GTAGGTGCACA ACGA TGTGCATCTAC          TATTATTTGTACCCT  77 50
        nrdA 2131020 .. 2131058 -  -9.7  -2.90496   CTTGCTGCGAAACTA  TAGATGGCAAG-TTGGCA TTAT TGCCGCGCTTGCCATCTA   ACAGGTGGTGCATTG  75 45
        nrdB 2129816 .. 2129831 -  -7.6  -3.14931   TTCACTGCTCATTAA              GCTGTA AGAT TACAGC               TCAAAATCAGCGAAA  65 19
JN178_RS09570 2129054 .. 2129068 -  -2.8  -4.64157   CAAACAAGTATAAAA               GCAAGT ACG ACTTGG               CTATCGTCGAGCTTC  65 497
JN178_RS09555 2127175 .. 2127185 -    -4   -2.9214   AAAAGAGAACACAAG                 CTTT CGA AAAG                 AACGGGAAAAAACGC  46 282
JN178_RS09545 2125030 .. 2125040 -  -5.4  -3.74224   TTGAAATCATTTAAA                 TTGC TTA GCAA                 TAATTTCTTTCTCTC  62 6
JN178_RS09540 NONE
JN178_RS09535 2123338 .. 2123370 -   -12  -4.30987   AGGGCTCAGAATAAA      GCGGGGTTAATGGA TAACT TCCATAAGCCCCGC      TGAACGTTTTTTATC  95 83
JN178_RS09505 NONE
         bcp 2115618 .. 2115636 -  -7.4  -5.81412   CGTAGCTAAAAAAAA             GCCCCT TTAAACG AGGGGC             TTTTAATACACAGTG 100 52
JN178_RS09495 2115178 .. 2115195 -    -4  -3.41023   AAGCGGTAAAATAGA             GCGCCG ATATCA CTGCGC              GTCGCACTATCTACA  51 32
JN178_RS09485 2113393 .. 2113421 - -14.8  -3.19513   ATAACGGCAACGGAA        TAAAAAAGGGGC AATGA GCCCCTTTTTTA        GTGGTGTTAAGCGTT 100 32
JN178_RS09475 2110484 .. 2110511 -  -9.8  -4.99947   TCCAAGGAAATAAAA        CGCCGCCTTACA GAAA TGCAGAGCGGCG         TTGTCACCATAAGCA  93 54
        arsC NONE
        wrbA NONE
JN178_RS09455 NONE
JN178_RS09450 2106153 .. 2106164 -  -5.8  -3.40597   CGCGTGAGTGAAACA                CAGC ATAC GCTG                 GTAATATGTACCAGT  56 354
        purM NONE
        purN NONE
JN178_RS09425 2101538 .. 2101570 - -22.3  -4.64861   TGTGCTTAAAACAAA      CTGCCGAGTTTAACA AGA TGTTAAACTCGGCAG      AGTTAATACGATGAA 100 62
        fadE 2098704 .. 2098721 - -12.7  -4.62669   TAACCAAATAAGAAA             GGCCGCT ATTA AGCGGCC              TTTTTAGTTAGAAAC 100 59
        cmoA NONE
        cmoB NONE
JN178_RS09400 NONE
JN178_RS09395 NONE
JN178_RS09390 NONE
JN178_RS09385 2091230 .. 2091249 -  -4.2  -3.41757   TCGAAAAGTATAATA            CCGCAG CTTCCCTT CCGCGG             TCAGTGTTTGTTTGT  53 75
JN178_RS09380 NONE
JN178_RS09375 2089088 .. 2089100 -  -9.1  -3.53012   CCGCGCGCTTTTAAA                CGCAG TCA CTGCG                GCTAATTCGTTCTTT  74 39
JN178_RS09370 2087643 .. 2087656 -  -4.5  -3.29626   CAATACCGATACTAA               GCG-CG CAA CGTCGC               ACCGGGGCGCTGAAT  52 8
        cysK 2083604 .. 2083619 - -10.4  -5.72622   CCCACAAACAAAAAA              CGAGGC CTAA GCCTCG               TTTTTCAATTCAATC 100 52
JN178_RS09345 2081565 .. 2081616 -  -9.3  -3.94402   ATAACTTTTAAATAA GGGGCGCAGGCGCGTGGGCTA AAATGCGAAG CAGCCCACGTGTATGCGTCCC AACGAACGCAGTGAG  81 78
JN178_RS09340 2080566 .. 2080580 -  -7.2  -3.63515   CTTTATGTTGAAGAA               TCAAAC GGT GTTTGA               CAGTGAGCGCTTTTT  67 522
JN178_RS09325 2077174 .. 2077190 -  -3.7  -3.02511   GTCATCCTTGGAACA              CCTAACT TTA AGCTAAG              GAGCAGTAATGCGTG  47 127
JN178_RS09320 2076784 .. 2076835 - -13.7     -3.94   CTAACTTCTAAATAA GGGGCGCAGGCACGTGGGCTA AAATGCGAAG CAGCCCACGTGTATGCGTCCC AGCGAACGAAGTGAG 100 84
JN178_RS09315 2076105 .. 2076129 -  -4.2  -2.63252   ACTTTTCAATAAGAG          GCGATGACGC GTGGG GCGTTATAGC          GAAGCGGCCCTGCGT  47 95
JN178_RS09310 2075715 .. 2075726 -  -7.2  -2.59881   CACGTAGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGTATGTGTC  59 74
JN178_RS09305 2075341 .. 2075353 - -10.5  -3.16564   TTTTTATCCCAGCAA                CCCGC GCA GCGGG                TTGCGACTTGAGCGT  78 40
JN178_RS09300 2074610 .. 2074652 -  -7.9  -3.60971   ACCCTAACTTTTAAA TATGGGGCGCATACGCAT GGGCTAAA ATGCGTA-GCAGCCCATA TGTTTGTTTTTCACC  70 67
JN178_RS09295 2074109 .. 2074122 -  -3.7  -3.63837   ATAACTTTTTAATAA               GGGCG CAGG CGCGC                GGGCGATAATGCGAA  53 95
JN178_RS09290 2073570 .. 2073585 -  -3.2  -3.29144   GCACGTGGTCTATAA              TGCGAA GTAG CCCGCA               TGTATGCAACTCAGC  48 60
JN178_RS09285 2072818 .. 2072828 -  -4.6  -3.60475   AATAAACGCCCCAAA                 CGCC TTT AGCG                 TTTCGTTAGGTGCGT  55 31
JN178_RS09280 NONE
JN178_RS09275 2071313 .. 2071323 -  -4.6  -4.81163   TAAACATTAATAAAA                 GGCC TGC AGCC                 CCCGCAGATGCCCCA  73 242
JN178_RS09255 NONE
JN178_RS09250 2069124 .. 2069149 -  -3.3  -2.58362   TAAAACATTAAAATT         GAAAATGCCGT TTTC ACTGAATTTTC          CTTAATTTTTGGTCT  43 149
JN178_RS09245 2068644 .. 2068654 -  -5.4  -2.76093   AATTTGAATAGAGCA                 CTGA AAA TCAG                 GTACGAAGCTAACCC  52 44
JN178_RS09240 NONE
JN178_RS09235 2067656 .. 2067674 -    -6  -2.87769   ATTGAGCAAATACTA             CTTAGCTA CAG TAGCGAAG             CCACCCAAAGTGTAC  54 80
JN178_RS09230 NONE
JN178_RS09225 2066500 .. 2066512 -  -5.5  -3.09289   CACTATGCCAACATA                GCAAC GAA GTCGC                GCAGAATGAAACAAA  54 114
JN178_RS09220 NONE
JN178_RS09215 NONE
JN178_RS09210 NONE
JN178_RS09205 2064267 .. 2064279 -  -2.7  -3.35813   CTGTATTTCAACTAA                CTTTG TGG CAAAA                AATGGATATGCACTT  46 68
JN178_RS09200 2063661 .. 2063703 - -10.8  -3.61398   GTGTTTTTTTAAGAA CATGAAATGGCTCTCAACTT CCT AAATTCAGAGCCATTGCATA GAAAACGTGTTTCTT  83 41
JN178_RS09195 2063022 .. 2063033 -  -4.4  -4.43949   AAAATCAAATAGAAA                TGCT GAAA AGCA                 GGGAAGCGAAAGTTT  66 95
JN178_RS09190 2061987 .. 2062013 - -10.2   -2.6175   TAGACTGTAAGGAAT         GGGAAGTTGCTT TTA AAACGACTTCCC         GTTTTTACCTAATAA  74 30
        rrtA 2058606 .. 2058618 -  -6.3  -3.02461   TAAGTTGTTTGAAGA                GAACT TAT AGTTC                CTTGAATTAGCAATT  56 127
JN178_RS09165 2055384 .. 2055394 -  -2.6  -3.53012   TTTTTTTTGCCTAAA                 TAAA AAA TTTA                 TTTGTTTAGCAATGC  47 23
JN178_RS09155 2051871 .. 2051898 - -15.8  -5.07567   CCACATTGTAAAAAA        TAAAAAAGGGGC GTAT GCCCCTTTTTTA         TGCTTTGCAACTCAT 100 63
JN178_RS09140 2048726 .. 2048743 -  -4.1  -2.90711   ATGCAAATAATAGCA             GGCAGGCA TTA TGCC-ACC             GATGGTAGAAAAAAC  47 213
JN178_RS09135 2047455 .. 2047479 -  -7.2   -4.8622   TGGTCCAATTAAAAA          GCCATCAC GCGTCAAAG GTGATGGC          TTTTAGCATAAACCG  83 47
JN178_RS09130 2046591 .. 2046601 -  -2.4  -4.13561   TCCCTTCAAAAAACA                 TGGG CTA CCCC                 GTACTAACGTATAGA  54 59
JN178_RS09125 2044397 .. 2044446 - -13.8  -3.74251   CAGATTCCTATTAAA TTGTTTTACTAAGAGGCTTCAC GCTGAA GTGAAGCCTCTTAGTAATACTC ACGTGGCTTTATGCG 100 41
JN178_RS09095 2037331 .. 2037351 -  -2.6  -3.49419   CTTTCCTATAAAAAC            CCCATTTT TGTGC AAAATGTG            CGTCGATCGTTTGAA  47 122
JN178_RS09090 2034870 .. 2034895 - -14.1  -5.61596   AGCCGCATAAAAAAA         GCGGTAGTGTT TAAA AACACCACCGC          TTTCTATGCAAGCCA 100 77
JN178_RS09070 2029188 .. 2029212 - -11.4  -4.13748   CCTAAAAAGACGAAA          GGCTGCCTTC ATCAA GATGGCAGCC          TTTTTTGTAGGGAAT  90 63
JN178_RS09055 2025405 .. 2025419 - -11.4  -6.26417   TAGCACAAAAAAAAA               GCGAGC AAT GCTCGC               TTTTAAAAATAACAC 100 59
JN178_RS09050 2024886 .. 2024909 - -10.4  -5.34655   TAACTAAAAATAAAA          TAAGGCCTGT AAAA ACAGACCTTA           TTCTTTTATTACTTA 100 53
JN178_RS09045 2024036 .. 2024050 -  -2.8  -2.80991   ATCTAAAGAAAGGCA               GTCG GTTCACA CGAC               TTAGACAACTATTAT  42 53
JN178_RS09040 NONE
        fldA 2023115 .. 2023130 - -10.4  -5.84381   CCAGCAATAAAAAAA              CCGCTC AAAA GAGCGG               TTTTTTTATAATAGT 100 49
         fur 2020270 .. 2020285 - -10.4  -5.64274   CGATGCATAAAAAAA              GCCTGC GCAA GCAGGC               TTTTTTGTTGATTAG 100 63
JN178_RS09000 NONE
JN178_RS08995 2015514 .. 2015532 -   -11   -5.4505   GGTTTCAATAAAAAA             GCCAACCC AAA AGGTTGGC             TTTTTTCACTAAGCG 100 69
JN178_RS08990 NONE
JN178_RS08985 NONE
JN178_RS08980 2007721 .. 2007767 - -16.7  -5.28778   ACCAGCCATAAAAAA GCGGGTTAGCAGAACAAACAC CTAGT GTGTATGTCATGCCAACCCGC TTCTATTAGTAAGCT 100 49
JN178_RS08965 NONE
        yfbR NONE
JN178_RS08955 2002519 .. 2002530 -  -2.2  -2.71763   CGTATAATCAGACGA                GTGC TTAT ACAC                 GTGAACGCGCTACGA  40 195
        msrP NONE
JN178_RS08940 1999687 .. 1999703 -  -3.7  -3.30439   AATACGGAAAGGTAA              TAGCCAT TAA ATGGTTA              CGGATAAAAGAAAGT  50 224
JN178_RS08930 1998801 .. 1998814 -  -2.3  -3.58878   CAACAAGATTAAATA               GGCAC AAAA GCACC                ACCATATCTACAATG  48 67
JN178_RS08925 1998030 .. 1998042 -  -5.5  -3.38224   ACCTTATTTTAAAGA                GTGAC AAA GCCAC                TACCTCAAATGGCGA  57 195
JN178_RS08920 1996845 .. 1996883 -  -8.3  -3.12999   TTATTCTATATCCAA  TCACCCACCACT-CG-ACA TCT TGTGCGTAGTGGGAGGTGA  ACATTTTGCGATGTT  66 368
JN178_RS08880 NONE
JN178_RS08875 NONE
JN178_RS08870 1986528 .. 1986549 -  -4.3  -5.89947   GAAAGCCAAAAAAAA           CGACTCTAC ACAC GGAGAGGCG            CAAAATTCTAACGTA  93 88
JN178_RS08865 1985291 .. 1985322 -  -6.6  -3.04398   GGTGTGTGCCAAAAG      CTGCCGTTCAAATA TTTG CAATCAAACGGCAG       AAGAGTACGTAAAGC  58 100
JN178_RS08840 1980473 .. 1980490 -  -6.3  -3.05935   ATACCTCGTATTTAA             TGGGCGGT CCA ACCGCC-A             TCGACTTTAAGACAA  57 4
JN178_RS08835 NONE
JN178_RS08830 1978373 .. 1978401 -  -8.2  -4.70583   TGCACCAAGATAAAA       GCCCCACAGATGA CATA TC-TCTGTGGGGA        AATATATCTCTAACG  87 45
JN178_RS08825 1976049 .. 1976066 - -12.7  -5.52023   AGCACCAATAAAAAA             GCCTCGC AGGT GCGAGGC              TTTGACATAAGTTAT 100 62
JN178_RS08820 1975204 .. 1975219 -  -7.5  -5.02074   TTATCCCTTAAAAAA              GCCCC TATATG GGGGC               TTTCGTAATTCTAAT  89 71
JN178_RS08725 NONE
JN178_RS08720 NONE
JN178_RS08715 1953720 .. 1953735 -  -2.6  -2.70932   GCCGCTTTTTAACTA              CTTTGT TAGT ACAAAA               AGGTAGGCTATTGTT  41 33
JN178_RS08710 1952512 .. 1952530 -  -2.4  -3.74447   TAAAAAAGCACACAA             TAAAGAAC AGT GCGCTTTA             GATGGCAATTACGTA  50 346
JN178_RS08705 NONE
JN178_RS08700 NONE
JN178_RS08695 1949067 .. 1949103 - -10.9  -3.47841   ATATCGACATGATAA    GGTCAGCTCAAAACGGT TAA ACCATAGTAAGCTGACC    TTCAGTGTTGTGTTA  83 51
JN178_RS08670 NONE
JN178_RS08665 NONE
JN178_RS08660 1943396 .. 1943413 -  -8.4  -3.11609   AATTGAACATACATA             GGGGCT TTTTGT AGCCCC              ACTTCATTGAGTATA  68 55
JN178_RS08630 NONE
JN178_RS08625 NONE
JN178_RS08620 NONE
        aldA 1931372 .. 1931384 -  -4.9  -2.95081   TCAGCGAAAAGATGA                TAGTT GAA AACTA                GGCTATATTGACTAT  51 290
JN178_RS08610 NONE
JN178_RS08605 NONE
JN178_RS08600 NONE
JN178_RS08570 NONE
JN178_RS08565 1919137 .. 1919164 -  -9.2  -3.48629   ATTAAATTGAAAAAT        CCGCTCATCA AAAAATAG CGATGAGCGG         TAAGTAGTATAAAAA  77 82
JN178_RS08550 1913446 .. 1913461 -  -2.5  -3.90112   GTTGGGCGAACTAAA              GTGCC TAAAAC GACAC               TTTAGATTCATGACT  53 61
JN178_RS08545 NONE
JN178_RS08540 1910408 .. 1910429 -    -3  -5.01732   AAGCTTCCTAAAAAA           GAATGGGT TACTGT ACCAATTC            CACTCAAATGTTTTA  70 250
JN178_RS08530 1908279 .. 1908303 - -11.5    -3.136   GCAATATTGAATAGA          TTCCCGCGA GCAATTG TCGCGGGAA          TTTTTTAGTATTGAT  83 30
JN178_RS08500 1897044 .. 1897058 -  -4.2  -3.52475   CGGAACAGAGCAGAA               GACAAC TCT GGTGTC               ATATGTATATTCGAC  52 269
JN178_RS08490 NONE
JN178_RS08485 NONE
JN178_RS08480 1893128 .. 1893139 -    -3  -3.11191   AAAAAAGGCTGAATA                TCAA TTGA TTGA                 ATTTAAGAGGGATTT  44 14
JN178_RS08475 1890227 .. 1890260 -  -2.9  -2.61264   CTGTCTATGCATAAT     GCTTTTGCTGGCGGC AAAC ACCGCCAGCATCTCC      TAGTGATTAGAATTT  41 32
JN178_RS08470 NONE
JN178_RS08465 NONE
JN178_RS08460 1886820 .. 1886840 -  -2.5  -3.30783   CCACGATAAGTAACA            CAACAATCG CTT CATTTGCTG            ACATTGGCTACCTTA  46 103
        astB 1880369 .. 1880397 - -14.7   -2.5661   TATATTAATGAATAC        TAAAAAGCCCGTC GTT GACGGGCTTTTTT        AATTATATTGTTACC 100 36
JN178_RS08425 1876327 .. 1876344 - -12.7  -5.29782   GACACGCATAAAAAA             GGCAGCG TTAA CGCTGCC              TTTTTGCCTGTGTAC 100 45
        rnhA 1870433 .. 1870469 -  -6.6  -3.44257   AAAAGACATTGATAA    GCCTCACGTACGGTTA GAGAA CAACGATACGCAAGGC    AAAATTGTGGTGTCA  63 67
JN178_RS08370 1867730 .. 1867748 -    -6  -4.74103   GTGCCAATCTAAAAA             CTTGAACA TCC TGTTCGAG             TAAATCCATTTTCTT  77 404
        sbcB NONE
JN178_RS08325 1852501 .. 1852523 -  -4.2  -4.35604   TGAACGTACAATAAA          GGCGCTATA TCAATC TA-AGCGCC           TTGGATATGGTAATG  64 54
JN178_RS08300 NONE
JN178_RS08295 1845481 .. 1845491 -  -4.6  -2.82142   CGTAGAGCGAAGAAC                 GGGC ATG ACCC                 CTCCTTGTGTGACAG  48 100
JN178_RS08290 NONE
JN178_RS08285 NONE
JN178_RS08280 NONE
JN178_RS08275 1839981 .. 1840015 - -13.1  -5.27335   TTGCCTAAAGAAAAA    TAAAGCGCAGTA-GGT AAAA ACCATACTGCGCTCTA     ATATTGGTATCGGGC 100 109
        glgC 1835487 .. 1835511 -  -7.9  -3.04792   TGAGCATCCTGAAGA          GGTAGCAGC ATTTGTA ACTGCTACC          TTGAACAAGTGGAAT  62 63
JN178_RS08240 1832316 .. 1832340 - -11.6   -5.3236   ACAATTGAGAAAAAA          CCTGTTTGTT AAAAA AACAAACAGG          TTTTTTATTTCTTAG 100 37
JN178_RS08230 NONE
JN178_RS08225 NONE
JN178_RS08220 1829213 .. 1829234 -    -3  -3.46511   TCAGAGAATCCACAA           TCAAGACA GCTTAT TGTCATGA            ATTTTCCAGTTTTTG  47 20
JN178_RS08215 NONE
JN178_RS08210 1828430 .. 1828440 -  -8.2  -2.77895   TCTATCCTCAATAAT                 GGGC AAA GCCC                 CGAAATCACGATATT  66 124
JN178_RS08205 1827805 .. 1827826 -  -7.1  -2.56596   GGTGGGATGAATTCA           CCCGCACGC TAAT GCTAGCGGG            GAAAAGACTTACACC  57 386
JN178_RS08190 NONE
        xthA 1825544 .. 1825554 -  -2.6  -2.72461   CAATTCCTGTTAAAT                 TTAA ACG TTAA                 CTAGTCGCTGTACAC  41 26
JN178_RS08180 NONE
JN178_RS08175 NONE
JN178_RS08170 1822076 .. 1822097 - -10.1  -4.27483   ACCTATAAAATCAAA           GCCTCAGAC ATTC GTCTGGGGC            TTTTTTATATCTAAC  86 99
JN178_RS08155 1819391 .. 1819413 -    -2  -2.99649   ATACGGCGATATATA           CTGCTAAAAG TAC CTTTTAGGAT           CCCGAACGTTTTTCC  42 19
         mfd NONE
JN178_RS08145 NONE
JN178_RS08140 1813591 .. 1813633 - -13.7  -2.87132   TTTGCCTTTCATACA CTTGTATAACGCACTTTGC TAAGT ACAAAGTACGTTATACAGG CACCTCTTCTACGCC  93 17
JN178_RS08125 NONE
        ybaK 1808546 .. 1808556 -  -5.4  -3.61764   GCAGTAACTTTGAAA                 GTGA TAA TCAC                 ACAGTGTTAACTACT  59 189
JN178_RS08090 1801098 .. 1801116 -  -3.9  -3.33162   CAGTCCATTCGATAA             TGATTGA AGATG CCAATCA             TTTATGACAAAAACA  49 49
JN178_RS08085 1800134 .. 1800163 -  -9.4  -5.45802   TGGGGAAAATAAAAA       GCACTGGTTTTT TAACTC AAACACCAGTGC        TGATTTGTGAAATAA 100 62
JN178_RS08075 1796171 .. 1796186 - -10.4    -5.055   TTAATTTTTAAAAAA              GGAGGC ATTA GCCTCC               TTTTTTACTGAGTTT  93 70
JN178_RS08035 NONE
JN178_RS08030 1784600 .. 1784624 -  -2.8  -3.88396   CCTTAAACTAAAACA          TCGGGTTAGC TTCAT GCTAACGCCA          TCTTTCGTAATTGTA  53 102
JN178_RS08025 NONE
JN178_RS08020 1782564 .. 1782582 -  -7.4  -2.96157   GTGAGAAAAAATCTA             CTCTTGCT GAG AGCGAGAG             GGTCTAGCAATTTTA  61 4
JN178_RS08015 1782064 .. 1782080 -  -3.7  -3.57263   ATGCCGATGGCTAAA              TCAAGCA CAG TACTCGA              TAAGAAAGCACATAC  53 56
JN178_RS07985 NONE
JN178_RS07980 1773057 .. 1773075 - -14.6  -4.07568   GTTCTTTCGGGAAAA             GGCGAGCA GGA TGCTCGCC             TTTTTTCGTTTTAAG 100 60
JN178_RS07955 NONE
JN178_RS07950 1767647 .. 1767658 -    -3  -3.01924   TAGGGGGCGGCAATA                CATA TCGT TATG                 TCACGCACAAGCACT  43 26
JN178_RS07945 1766400 .. 1766410 -  -4.6  -4.18164   AATGGGCCAAAACAA                 GGCA ACG CGCC                 CACTGTCGAGAAACA  64 164
JN178_RS07930 1763439 .. 1763457 -  -5.4  -4.62069   CTTTTACCCTAAAAA             CAACAAAA TAG TTTTATTG             TTGTTTTTAATACCA  72 108
JN178_RS07925 1762616 .. 1762639 -  -2.4  -4.08767   TCGATGGCGTTAAAA          CAAAAGGTGT GCTC ACAGCGTTTG           TAATTGTTGTTGTTC  54 196
JN178_RS07920 NONE
JN178_RS07915 NONE
JN178_RS07910 NONE
JN178_RS07905 NONE
JN178_RS07900 NONE
JN178_RS07895 1755998 .. 1756009 -  -5.8  -3.00128   TATGAAAGATAACTA                GCGA CTAT TCGC                 AATTATAGCTGTGTA  56 28
JN178_RS07890 NONE
JN178_RS07885 1751557 .. 1751582 - -12.7  -5.93809   TCCTTATAAAAAAAA         GGGTAAACTCG TATT CGAATTTACCC          TTTCTTAACTTTACA 100 50
JN178_RS07880 1750388 .. 1750413 - -12.7  -3.55444   GTGCTATCCGCGAAA         CGCGC-AAAGGT ATA ACCTTTAGCGCG         TTACCTCGCAATTTA  95 62
JN178_RS07860 1744089 .. 1744099 -  -4.6  -5.10933   CTACCTAAAAGAAAA                 GCAG ATC CCGC                 TTACTGTTTGCCCTT  77 358
JN178_RS07850 1741724 .. 1741739 - -10.4  -5.57396   ATAATCAATAAAAAA              GGTGGC CATG GCCACC               TTTTTTCGTCTAACT 100 49
        xdhA 1738028 .. 1738038 -  -3.2  -2.57244   GTATCGATTAACTTA                 CGCA TGC TGCA                 CCACCCGAGTCTCAA  43 12
        xdhB NONE
        xdhC NONE
        uraD NONE
        uraH NONE
        guaD NONE
JN178_RS07800 1731362 .. 1731399 - -14.9  -2.90633   AAACATTAAAGATTA   GTATCGCGTCGCATGCA CATG TGATCGCGACGCGATAC    TTTTAAACTAATTTT 100 33
JN178_RS07790 1729121 .. 1729150 -  -7.2  -3.03124   GGTTATTCGCGAAGA       CTGCGTAACCAA AAAACG CTGGCTACGCAA        ATCTTTGCGTTAAAA  61 49
JN178_RS07785 1728734 .. 1728761 -  -8.6   -3.5393   AGTAGGGGCTCTAAA        TAAAAGAAGCAT AAAA ATGCCCCTTTTA         TCTTAAATGACGAAG  74 44
JN178_RS07775 NONE
JN178_RS07770 NONE
JN178_RS07765 1724232 .. 1724247 - -11.8  -4.56597   GGCGTTGTTTAAAAA              CCGCGC AAAT GCGCGG               TTTTTATTTGGCCAC 100 48
JN178_RS07755 NONE
JN178_RS07750 NONE
JN178_RS07745 NONE
JN178_RS07740 1716500 .. 1716515 - -10.4  -5.39905   ATCAAATAATAAAAA              GCCAGC TTAC GCTGGC               TTTATTGACTTATAG 100 103
JN178_RS07735 1715573 .. 1715585 -  -3.3  -4.27117   CTTGCAGAATACAAA                GAGCA TTT TGCGC                AAGCTGGTGTTGATA  60 462
JN178_RS07710 1711026 .. 1711040 -  -2.1  -3.33671   AGAGTTACTCGATAA              TC-GCG AACG CGCTGA               ACAAGCAAATAAGTG  45 294
JN178_RS07700 NONE
JN178_RS07695 NONE
JN178_RS07690 1706544 .. 1706558 -  -7.2  -4.83759   AATGAAATCGAAAAA               CTTCTT ACA AAGAAG               TAGGGGAAGAGACCT  81 45
JN178_RS07680 1703643 .. 1703658 -  -7.6  -3.14878   CGTTTGAAGGGAAGA              GTTCAG TTTT CTGAAC               AGTGCCGTTGTGGGC  65 50
JN178_RS07675 1702239 .. 1702258 -  -2.2  -2.75826   GATGGCAATAGACTA            TTCATTAG GGTA CCAATAAA             AGAATAAAAAAACGT  41 88
JN178_RS07670 1701090 .. 1701118 -  -8.9  -3.04537   ACCATAGCATAGAGA        CCGCATACGACAA AAA TTGTCGCATGCTA        AATTGTTACAGTGAA  69 71
JN178_RS07665 1699686 .. 1699714 -  -3.1  -3.88105   ACAAACAGAATATAA        TAGGGGCGCAA GGCGTTA TTGCGCAGCTA        ACGTGCAAAGAAGAG  55 313
JN178_RS07640 1695184 .. 1695209 -  -6.2  -3.43919   TCTAAATGCTAAACA         CTTTGCTGTA AAAACG TACGGCAAAG          GTCAACACGCTCTAA  60 41
        hppD 1693705 .. 1693722 -  -8.4   -4.7657   GAAAAAGGTGAAAAA             GGCAGC GATTAA GCTGCC              TTTCACCAGATACGA  87 48
JN178_RS07625 NONE
JN178_RS07620 NONE
JN178_RS07615 NONE
        dapE NONE
JN178_RS07605 1689757 .. 1689770 -  -6.7  -3.53012   CCTTTTTGTTTTAAA               CTGCA ATAG TGCAG                TTTACACGGCACTTC  63 27
JN178_RS07600 1689514 .. 1689533 -  -6.4  -4.82667   CGAGCAGACTAAAAA            GGTAAGGG GGTT CACTTACC             AATCATCTTCATCGT  79 21
JN178_RS07550 1678237 .. 1678250 -  -3.1  -3.68036   AACCAGTGTAAAATA               GTGCT TTTT AACAC                AAGACGTTCTCTATC  51 67
JN178_RS07545 NONE
JN178_RS07540 1674741 .. 1674780 - -18.8   -5.5943   AAATGATCAAAAAAA  GGCGTCCGCAATTCTCTT TCGC AAAAGAATTGGGGACGCC   TTTGTCCAAATCATT 100 323
JN178_RS07535 1673776 .. 1673823 -  -5.8  -3.09933   CCCCAATTGATTTAA GC-TGCGCGACTTCTGTTGAAT TAAATC ATTCAT-AAAAGCCGCGCATGC GCATTGTTAAATGGG  57 32
JN178_RS07530 NONE
        cynS 1671452 .. 1671462 -    -4   -3.3062   CTCAAATACCATTAA                 TACA TTT TGTA                 GGGCAAAAACTTACC  49 11
JN178_RS07520 1669749 .. 1669781 - -12.8  -2.78679   GCGTTGGAGTTAAAG      CGCCACTTTGTGCA GTTAG CACACAAAGCGGCG      AAAGTGTAAACACTA  90 42
JN178_RS07485 1663118 .. 1663138 -  -3.9  -3.13109   CAGACGAGGCAAAAT            GCGATGGAC CGT GTGCATTGC            CGTTGGCTAAGCTAG  48 202
        lolB NONE
        ispE NONE
JN178_RS07440 NONE
JN178_RS07435 1654153 .. 1654169 - -13.7  -5.29385   AATGCAATTAAAAAA              GGCGAGC CAT GCTCGCC              TTTTTGCTGTTTGCT 100 55
JN178_RS07425 1652610 .. 1652625 - -10.4  -5.33405   GCTAGCAAACAAAAA              GCGCCT ACTA AGGCGC               TTGTCATCGCACTAT 100 70
JN178_RS07420 1651809 .. 1651822 -  -6.7  -3.13432   GCGAATATCAGCCAA               GAGGA TTAT TCCTC                AGTAGCTTCTTCTTC  60 17
         pth 1651181 .. 1651193 -  -4.1  -4.19258   ATACCGCATTTAAAA                CCCAT GGT ATGGA                TCCTTGTCTGGAAAA  59 59
        ychF 1650030 .. 1650047 - -11.3  -5.80951   ACTTAAAACAAAAAA             GCCACCT TAAC AGGTGGC              TTTAAAAATACTGCT 100 72
JN178_RS07405 1648867 .. 1648880 -  -3.1  -4.14392   CGTGAATTGCCAAAA               GCGCAG TGG CTG-GC               ATAACCTACAAAGCT  57 149
JN178_RS07400 1648570 .. 1648581 -    -3  -2.78679   TCCGCGCAGCTAAAC                TTTC CTAA GAAA                 TAATAGAGAAGTGGT  42 37
JN178_RS07395 NONE
JN178_RS07390 1648381 .. 1648396 -  -4.8  -3.04263   ACGTTAGCTGTAATA              TTCTTT TAAA AAAGAA               TGGCTGGGGTAACAG  51 26
JN178_RS07385 NONE
JN178_RS07380 1648170 .. 1648186 - -13.7  -5.07486   TATTTTCAATAAAAA              GCCGCTC ACA GAGCGGC              TTCTCAAGAATTTGG 100 38
JN178_RS07375 1648046 .. 1648057 -    -3  -2.78679   TCCGCGCAGCTAAAC                TTTC CTAA GAAA                 TAATAGAGAAGTGGT  42 37
JN178_RS07370 NONE
JN178_RS07365 1647837 .. 1647866 - -12.3  -5.21709   GTTTATAGCAAAAAA       TAAAAAACCGCTC AAAA GAGCGGCTTTTCA        AGAATATGGCTGGGG 100 32
JN178_RS07360 1646163 .. 1646178 - -10.4  -6.09196   CCTAAAACAAAAAAA              GGAGGC CTTC GCCTCC               TTTTCTAGTCGTTAA 100 51
JN178_RS07345 1643757 .. 1643768 -  -4.4  -5.42259   GTAGGTGGAAAAAAA                GACT CTTT AGTC                 AATGTGCAAGAAACC  84 455
JN178_RS07335 1642818 .. 1642838 - -15.5  -3.62096   GTGCAGCACGCTAAA            GGCCGATAC CTT GTATCGGCC            TTTTTTCATTGCGGC 100 43
JN178_RS07325 1638332 .. 1638351 -  -3.6  -5.51353   CAAAAAGAAGAAAAA            GAATAGTC AGAT GATTATTC             GCATCAATGATCAAG  86 392
JN178_RS07315 NONE
JN178_RS07310 1637469 .. 1637485 - -12.3  -4.30014   TTTACTAAGTGAAAA              CGGAAGC CTA GCTTCCG              TTTTTAGTAATTAGC  95 16
JN178_RS07300 1636009 .. 1636029 -  -4.8  -3.65738   ACTAAATAATGATAA           GCAT-AGTC TTGT GACTTATGC            CTTGAGATACACTTG  57 139
JN178_RS07295 NONE
JN178_RS07290 NONE
JN178_RS07285 1631014 .. 1631035 - -14.5  -4.70515   CAGATTTAAAACAAA           GTGCTCAGC GAAT GCTGAGCAC            TTGAAATGGAGTGTT 100 39
JN178_RS07280 1628600 .. 1628611 -  -4.4  -3.61652   CCTGCAAAGAAGCAA                GTAC TTAA GTAC                 GCGATAGGAATACGA  55 199
        miaB NONE
JN178_RS07260 NONE
        ybeY 1624149 .. 1624159 -  -2.4  -3.53012   GCGTTTGCGCTTAAA                 CCTC GTA GGGG                 TTTTCAATACCCAAA  46 10
        corC 1623119 .. 1623138 -  -6.4  -5.86332   CTAAGCCAAAAAAAA            CAGGTGCC ATTA AACACCTG             CTTTCTTCATTTGAA 100 51
         lnt 1621451 .. 1621461 -  -4.6  -4.32049   GATAATTTAGTAAAA                 CGGG TAG CCCA                 AGTCACGACATATTC  64 81
JN178_RS07240 1620100 .. 1620126 -  -6.6  -5.63103   TCTCAAGTAAAAAAA         TGGCGCTC ATGTAATATTA GAGCGCCA         TTTTTCCAATGTCTT  90 68
JN178_RS07225 1614598 .. 1614640 -    -8  -5.09426   TTCAATGCTAAAAAA GCAAAAAAATTCAAAATTTT TTT AAGATGTTGAATTTTATTGC CTTTTAACTTCAACT  89 19
JN178_RS07220 1613964 .. 1613981 - -14.1  -5.63517   TCCCCAAATAAAAAA             CGGCGCC ATGC GGCGCCG              CTAAAAAGTTGGGAA 100 63
JN178_RS07180 1603347 .. 1603388 -    -6   -3.6269   CTACTTAGACAAATA GCCGCCAAT-G-AGTCGGTA ACTG TACCGTCTACCATTGACGAC CCTGCCAGCGTTAGC  62 96
JN178_RS07165 1597532 .. 1597542 -  -3.2  -4.36914   GCCCTGCGCACAAAA                 GACA ATG CGTC                 TAAGCGCTACAGCTA  62 53
JN178_RS07155 1595971 .. 1595981 -  -5.4  -3.60792   GGTGCAAGCTGCAAA                 TCGT GTC ACGA                 CGATTATAAAAAAGA  59 241
JN178_RS07130 1589246 .. 1589263 -  -2.7  -3.91465   CGTGAAAAAACAACA             GCTCA GTCAATCT TGAGC              ACGGCGTTTACATTA  53 145
JN178_RS07125 1585653 .. 1585665 -  -5.5  -3.09015   GGCACAGTCATGGAA                CTGGC AGG GCCAA                ACTCTGCAACTACAA  52 163
JN178_RS07100 NONE
JN178_RS07095 NONE
JN178_RS07090 NONE
JN178_RS07085 1574734 .. 1574746 -  -9.1  -4.13945   ATTCCTAGTGCAAAA                GTGCG ATA CGCAC                AATGTGCGCGCGCCA  80 310
JN178_RS07075 1571201 .. 1571240 -  -6.6  -3.07443   TGATAGGGCATGGAA  CGCTAATGTCC-TTTCATT TCC AATGAGTTGGACATTAGCA  CAGGTATTTTGCAAA  60 84
        nadK 1570259 .. 1570274 -    -4  -3.69924   AACATTAAGAAAAAC              CTACAC ACAC GTGTAA               TAAGTGCAGGAATTA  53 72
         dps 1569531 .. 1569547 - -12.3  -5.27923   CAATCGTAGAAAAAA              GAGAGGC AAA GCCTCTC              TTTATTACAATTTAT 100 49
        recN 1567643 .. 1567663 -  -2.6  -3.41961   ACTATGACCAATCAA            CTGCAT TTTAGTTCG ATGCAG            CGCTTTTAAGCAGTT  47 12
JN178_RS07055 1567137 .. 1567159 -  -6.3  -5.71295   AGAGAAAAAGAAAAA           GGTAGCAAA AACAA TCCGCTACC           TTTGAGATTTTTCTT 100 39
        tmpT 1566375 .. 1566386 -  -5.8  -2.90496   TCGCTTTGCAAATTA                GCAG TCAA CTGC                 ATAAAGGCTGTTTAT  56 54
JN178_RS07045 1565925 .. 1565935 -  -2.4  -3.67564   AATGATGTAGCTAAA                 CTCG ATA CGCG                 CTAAGCTAAAACCAC  48 31
JN178_RS07040 NONE
JN178_RS07035 1564496 .. 1564512 -    -3  -4.59773   CGTGATCTGCAAAAA             GTG-CGT ATAA ACGGCAC              AATAGTTGGCGGGCT  65 95
JN178_RS07025 1561968 .. 1561984 -  -2.2   -5.1101   CTAGCACTTAAAAAA              GCGC TACGTTACT GCGC              TCCGCTGTAACTGAC  69 17
JN178_RS07020 1560911 .. 1560929 - -10.4  -3.38812   CCGCTCCCAACAATA             TGTCTGAT ACC ATCAGACA             TTACAAATCATCTAT  76 458
JN178_RS06990 1553898 .. 1553913 - -10.4  -3.52896   TTATGATGCAGAGAA              GCCGCT AAAT AGCGGC               TTTTTTTGTGCTTAA  81 77
JN178_RS06960 NONE
JN178_RS06955 NONE
        trpD NONE
       trpCF NONE
        trpB NONE
        trpA NONE
JN178_RS06930 1542378 .. 1542395 - -11.3  -5.72622   CGCAGAAACAAAAAA             GCCTAGC GGGT GCTAGGC              TTTTGGGTGGGTGTC 100 48
JN178_RS06925 NONE
JN178_RS06920 NONE
JN178_RS06915 1539712 .. 1539731 - -10.8  -3.41602   TCCACTTTATTAGAA            GTCGAGAA CTAA TTCTCGAC             TTCGTGATAGGGAAA  83 14
        folX NONE
JN178_RS06900 1537088 .. 1537122 -  -6.4  -4.75288   TTAGAGCAAAAGAAA     GTGGACAGTCACTCAT ATA AAAAGTGTCTGTCCAT     TAACGGCATTAACGG  79 96
JN178_RS06885 NONE
JN178_RS06880 1532863 .. 1532874 -  -5.8  -3.97019   AGTAACTGCAAACAA                GTGG GTGT CCAC                 TTTGGTTAGCTTTAT  66 93
JN178_RS06875 1531623 .. 1531641 -  -6.6  -2.71995   GAAATAGCAAAAAGC             CCTCGCAG TAT CAGCGAAG             TGAATAAAGAGATTT  56 73
JN178_RS06810 NONE
JN178_RS06805 NONE
JN178_RS06800 NONE
JN178_RS06795 1522268 .. 1522282 -    -5  -3.54903   ACATAAAACCGATAA               TAGGTA CAA TACCCA               ACAATATCACGAAAG  57 161
JN178_RS06790 1520215 .. 1520228 -  -5.3  -5.01732   AATGGCGGGAAAAAA               TCTTC TAAG GAAGA                TATTCGCGACATTTT  77 428
JN178_RS06775 NONE
JN178_RS06770 1516411 .. 1516423 -  -6.3   -2.8352   CGGTAAGGCAATAAG                TACTG AAA CAGTA                AGCAAGGCGCTGGCG  53 316
JN178_RS06745 NONE
JN178_RS06740 1510664 .. 1510674 -  -2.4  -2.60032   CTCGGTGTAAAAAGC                 GGTC ATT GGCC                 ATTCTGCTCGTCTAA  40 17
JN178_RS06735 1510105 .. 1510119 -  -4.2  -2.83396   TTGAAATGAACACTA               CCGTTA AAC TGACGG               CTTTTTACTAGGTTT  48 33
JN178_RS06730 NONE
JN178_RS06725 1507925 .. 1507954 - -15.1  -4.10953   ATTTAGCAAAGTAAA       CAAAAGCCCCAGC TGTT GCTGGGGCTTTTT        TATGAAATAAGTGTT 100 86
        pepE 1502745 .. 1502771 -  -6.7  -3.74693   CCCCATTGCACTAAA        GCCGCCTAT-TGC GCC GCACATAG-CGGC        AAGCGAAGCGGGTGT  66 429
        bioA NONE
JN178_RS06670 1496836 .. 1496857 -  -2.3  -4.56607   TTAGCAATCATAAAA           CTTGTAGAGC TCT GCTCTA-ACG           TTTGAATGCGATGCT  61 517
JN178_RS06665 NONE
JN178_RS06660 1493927 .. 1493939 -  -3.3  -3.14218   GAGGCATTAAAATTA                CTCTG CAT CAGGG                CGTCCCACTTCGCTT  46 20
        cheD NONE
JN178_RS06650 1492143 .. 1492159 -  -2.9  -3.11445   AAAAATTTCTAAAAC              TCAAACG ATA CGACTGA              ATCCCGCATCACAGC  44 143
JN178_RS06645 1491606 .. 1491644 -  -2.6  -4.84359   TGAGTTGTATAAAAA GTG-GACGCATTTTGC-AG TTTA CTCGCATA-TGCGTCGCAC  AATGCGAGTTAAGTT  65 39
JN178_RS06640 1491071 .. 1491102 -  -9.6  -3.59979   GGTGGTCATCTCAAA      TTAGGG-AAGCCTAC ATT ACAGGCTTTCCCTAA      TGATGGGCTTGAGAA  78 22
JN178_RS06625 1486591 .. 1486609 -  -7.4  -2.68775   TCATCACCAAATTCA             CCGTTGAC TTC ACCAACGG             GTGACAACTTGTCAT  57 454
        asnS 1484848 .. 1484873 - -20.5  -5.72053   TAAGGAAACAAAAAA         GCCCGCGGTAG TTAG CTACCGCGGGC          TTTCTTTTATTAGGA 100 45
JN178_RS06605 1482573 .. 1482590 -  -6.9   -2.9176   AACGTTAGCGAGATA             TGGCCGC TAGT GCGGCAA              TCTCTATCGACAACA  61 187
JN178_RS06600 1481717 .. 1481736 -  -2.8  -3.14284   TCCTGAGTAATAAAT            GGATTTGA GGGG CCAAAGCC             CCAATGAATCTGTCT  44 42
JN178_RS06595 NONE
JN178_RS06580 NONE
        pqiB NONE
JN178_RS06570 NONE
JN178_RS06565 1473636 .. 1473657 -  -4.5  -4.30844   ACTTTAGTATCAAAA           TCAG-GCTAC AGT GTAGCGCTAA           ACTGTTTCAAAGATA  64 104
JN178_RS06560 NONE
JN178_RS06555 1469226 .. 1469246 -  -6.8  -6.06723   TCTTGCAAAAAAAAA            TCGGCCGT GTAAT AAGGCCGA            TTTTCAAAGGTAATA 100 54
JN178_RS06550 1468584 .. 1468603 - -12.2  -5.14477   TATAGACGTAAAAAA            GCCATTCG CTTG CGAATGGC             TTTTTTGTTGGTCAT 100 62
JN178_RS06535 NONE
JN178_RS06530 1461043 .. 1461081 -  -8.2  -4.48483   GATAACAAATAGAAA   GCGTGACCTTTACAGAAA CAG CTTTAGTAAAGGTCACTC   TCTTTTCGCTTGCTA  83 50
JN178_RS06520 1459423 .. 1459433 -  -6.8    -3.137   ATTAATACCATTGAA                 GCGA TAA TCGC                 GAAAAACTAGCGCGT  60 43
         asd 1457176 .. 1457193 - -12.7  -5.33785   AACTAGCATAAAAAA             CGCCCCA TGTC TGGGGCG              TTTTGCTGAGTATTA 100 38
JN178_RS06490 1453108 .. 1453128 - -15.5   -3.2794   TGTGACTTACATTAA            GCGTACGAC AAT GTCGTACGC            TTTGGTTGATTTTGC 100 1
JN178_RS06460 1447876 .. 1447894 -  -8.8  -5.27477   ACGTGAATTAAAAAA             GGCCAGTT TGA ATCTGGCC             TTTTTTGTACAAGAG 100 46
JN178_RS06450 NONE
JN178_RS06445 1443481 .. 1443499 -  -3.2   -4.4009   GCCCATTCCATAAAA             CTGAAT GCACTTT ATTCAG             TAATGAATATTGCTG  62 61
JN178_RS06440 1442610 .. 1442624 -  -4.2  -2.55999   TCATTCCACACCAAC               TCGCTC ATT GAGCCA               CTTTTGATTGAGTAC  47 15
JN178_RS06435 1441681 .. 1441693 -  -9.1  -2.75039   GACAGATTGGAATCA                GCGAC TAA GTCGC                TGTGCTAAAAAGTCA  68 10
JN178_RS06420 NONE
JN178_RS06415 NONE
JN178_RS06400 NONE
JN178_RS06395 NONE
JN178_RS06390 1436536 .. 1436569 - -15.5  -3.53012   TCTCTCTCCGCCAAA     TACAAAAGAACCGGC TTTT GCCGGTTTTTTTGTA      TTTGCTGGGATGTGA 100 106
JN178_RS06295 1423018 .. 1423058 - -12.8  -5.16572   AGGCAAGTCAAAAAA  GTAAGAAAAACGCATCAC TTTTT GTGATGCGTTTTTCTTTG  TTCCTTAAATGCTTA 100 42
        yciH 1413864 .. 1413894 -  -2.6  -4.25283   ATTTGTTTATGAAAA       TGTCAGAGGTTA TAAATAT TAACCTCCAGCA       AGCTTTACCTTGTAG  58 13
JN178_RS06245 1412970 .. 1412987 -  -9.1   -5.3671   AATATAACCAAAAAA             GGCAGCC TAAA AGCTGCC              TTTTCTATAGCACGT 100 70
        pheA 1411478 .. 1411519 -  -4.6  -2.64155   TGTGGTGTAAATGTA TTTCTGAACAGCCC-A-AGT ATTG ACTATAGGGCTGTTCAGCAG CGATAACACTCAGAG  47 49
JN178_RS06235 1410070 .. 1410085 -    -9  -3.54935   CAAATGCTTTTGAAA              GCTGAC GATG GTCAGC               TTCTTCGCGATAAGT  74 80
JN178_RS06220 1406673 .. 1406704 - -13.2  -3.60792   GGGGGAACCCTGAAA      TACAGTGAGAAGAA CTTC TACTTCTCACTGTA       AATGACAATGTGCTA 100 56
JN178_RS06185 1400831 .. 1400841 -  -5.4  -3.08996   CATTTGTACCTAATA                 GCAT CGC ATGC                 GGTTCAACTTAGCAG  54 29
JN178_RS06180 NONE
JN178_RS06175 1396532 .. 1396549 -  -8.4  -6.04953   ATACAAATAAAAAAA             CGCCAC GTAATA GTGGCG              TTTTTTTGATGGATA 100 51
JN178_RS06145 1388317 .. 1388331 -   -10  -3.09681   GAAAACTGTATGTAA               TTCCCG GAG CGGGAA               GTGCTGATGGCTTAA  73 290
        ccsA 1383746 .. 1383771 -  -6.2  -2.70932   TCCTGTCTTTAACTA         GCCTTCAAAT GTAGTA ATTTGATGGC          ATTGTTTCAAGCGAA  54 94
JN178_RS06125 1382117 .. 1382133 - -10.9  -3.22298   GTTACGCATTATCAA              GGGTTGT AGT ACAACCC              AAAACTATTCCCGCT  82 313
JN178_RS06110 1378620 .. 1378672 -  -2.7  -3.09117   AGTAAATTAAACAAC CCGCGCGTCTCGTTCATTGCCAG AAACACG CTTGGAATGAACGAAAAGCATAG CGGAAAAGTGAACAC  44 44
JN178_RS06105 1373754 .. 1373777 -  -8.1  -3.85567   AAGTTCAAAGGGAAA          GGGCAGTGG TGATAT CAACTGCCC           GCATGATGAAAGGTT  75 39
JN178_RS06100 1373291 .. 1373305 -   -10  -5.94597   GAAGACGAAAAAAAA               GAGAGC TTT GCTCTC               TTTTTTAGAATTCGG 100 52
JN178_RS06080 NONE
JN178_RS06075 NONE
JN178_RS06070 NONE
JN178_RS06065 NONE
JN178_RS06060 NONE
JN178_RS06055 NONE
JN178_RS06050 1359615 .. 1359642 - -12.1  -5.39721   CTATGACATAAAAAA        CGCGCCTTTTCG TTATC CGAAA-GGCGCG        TTTTTAAAACTAACT 100 56
JN178_RS06045 NONE
JN178_RS06040 1358217 .. 1358233 - -12.3  -5.44119   CTGAGGTGAAAAAAA              TCGGCCT TAT AGGCCGA              CTGAAGGGGAAGTGC 100 107
JN178_RS06035 1356006 .. 1356034 -  -4.5  -3.05844   TCTTTCATGCTAACA        CCTCTGTCATAGA CTC TCTACGTCAGTGA        GTGACCTTGCACGAT  50 104
        putP 1354411 .. 1354444 - -19.7  -4.07535   AAGGCCTAGAAACAA     CAAAACCCCGCTCAG TAAA CTGTGCGGGGTTTTG      TTTTTGCTACCTTAG 100 47
        cysD NONE
        cysC NONE
        cysQ NONE
        cysN NONE
JN178_RS06005 1348722 .. 1348739 - -11.3   -5.1356   TCTTATCAACAAAAA             GGGAAGC CTAC GCTTCCC              TTGTATGCAATCTTC  93 50
JN178_RS06000 1347774 .. 1347787 -  -8.1  -5.61596   ATGGGTATAAAAAAA               GCCCT TAAA AGGGC                TTTTTATCAATTTGA 100 45
JN178_RS05990 1345123 .. 1345145 - -13.5  -4.07789   TAACTGATAAAAAGA           CAAAGGCCC TTAAT GGGCCTTTG           TTGTTTTTTTACTTA 100 38
        asnB 1342301 .. 1342317 - -13.7  -6.36459   TGTAATAAAAAAAAA              CGCGGCT TGT AGCCGCG              TTTTTTGATGTAAGT 100 47
        queC 1339828 .. 1339853 - -10.6  -2.55446   CACAAATTTAGGAAT         TAAGTAGCCA ACGTTG TGGCTACTTA          TTATTCAATTCCAAT  76 54
JN178_RS05935 NONE
JN178_RS05930 1332959 .. 1332970 -    -3  -4.93316   CAATAATAGTAAAAA                TTCA GTCA TGAA                 TTACGCAATTCCCTC  67 238
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
JN178_RS05900 1326812 .. 1326826 -  -2.1  -4.25104   TTTTCTTGAGTAAAA              GAG-GC GCTA GCTCTC               AGCTGTAACACGCAC  57 17
JN178_RS05895 1326011 .. 1326065 - -19.1  -2.63257   AGTCCACAGAATTGA CAGTTACCATAAACTAAAAAGGAGCC GTTC GGCTCCTTTTTAGTTTATGGTAT-TA CTTGCGCTTTTTCTT 100 23
JN178_RS05885 1323255 .. 1323267 -  -6.2   -3.8917   TTTGAAGTAGAACAA                GGCC AAAAA GGCC                CACAAGCAGCAAACG  66 360
JN178_RS05875 1322032 .. 1322051 -  -8.6  -3.55447   CTACTGACTATACAA            GAGGCTTT ACTA AAAGCCCC             ACAGCCCAATATTGT  74 15
        gloA 1321478 .. 1321512 -  -5.7   -4.2558   TAGTCGTGAGTAAAA     TGCATTACAAAGCGC TTAAC GCGCTTTGTTTTGAA     TTAACTCAATGGCGT  68 6
        glpQ 1320261 .. 1320275 -  -7.1  -3.00525   TTGCCTCAAATGATA               CGCGA GAAAA TCGCG               CACAAAACCGTAGGG  60 91
         rnt 1318457 .. 1318474 - -12.7  -5.90231   ATAAAGATAAAAAAA             CAGCGCC TAAT GGCGCTG              TTTTTGTTTGCGTTG 100 63
JN178_RS05845 1316908 .. 1316927 -  -3.6  -2.85013   ATGTTAGAAGATAAC            TTACCCGCG CAT CG-AGGTAA            CATTACGCTTGAACA  44 438
        sodB 1308090 .. 1308107 - -12.7  -5.93252   GTTAAAAATAAAAAA             GCCTCGC AGTT GCGAGGC              TTTCAAATCGTTAAG 100 57
JN178_RS05810 1305891 .. 1305920 - -12.9  -3.44362   ACATAACACCTACAA       GTGCAAAGAGCGC AGAT GCACTCTTAGCAC        TTGTCCCGTTCGCAT  95 55
JN178_RS05805 NONE
JN178_RS05800 1302840 .. 1302855 -  -2.6  -3.25942   ATGGCCGGACAGCAA              TGGTCAC AAG GT-ACCA              ATGCCTACGCTACGT  45 169
        smrB 1298425 .. 1298447 - -10.8  -2.78018   ACTCGTTATTAATTA           TTTGATAACA TTT TGTTATCAAA           ACTTAATCGTTTAAG  78 459
JN178_RS05770 NONE
JN178_RS05765 1295188 .. 1295215 - -15.8  -5.00616   TCGTGTTTGAAAAAA        TAAGGGATAGAC GGGC GTCTATCCCTTA         GCGACGCTAAGCCAA 100 202
JN178_RS05705 NONE
JN178_RS05700 NONE
JN178_RS05695 1275592 .. 1275604 -  -4.8  -3.01712   TCGCGCGCTTGAATA                TGGC TTGCC GCCA                ACGGCGGGTGAAGGT  51 178
JN178_RS05680 1272408 .. 1272425 -  -5.6  -4.15565   TTTACGATCCCAAAA             TGCCTA TCTATT TAGGCA              ACTTAAATGGCATTC  67 136
JN178_RS05665 1269651 .. 1269675 -  -2.1   -3.6422   GACTTTGCTAAAACA          TTGGCATGCTT ATT AAAAATGCCTA          AGGAAAAGAATAGCG  48 23
JN178_RS05650 1267205 .. 1267215 -  -2.6  -3.09648   TAAGATACCGCAAGA                 TTTA ATC TAAA                 AGCGGCATCTCTCAA  44 21
JN178_RS05640 1265675 .. 1265704 -  -6.2   -3.8766   TTACAGCACATGAAA       GGGCGGGCGGCG GTTAAG CGCCTTTCGCCC        GCAAAAAGTGTGTTT  66 42
JN178_RS05625 1262828 .. 1262844 -  -9.4  -4.16284   ATATTGTGGAATAAA              GGTGGC GCTAA GCCACC              TTTATTTTTTGTAAG  82 16
JN178_RS05615 NONE
JN178_RS05605 1259343 .. 1259359 -  -6.5  -2.78154   GCATAGAGTGAATTA              GCGCACT TCA AGCACGC              TCTCTAACCATTCAA  57 6
JN178_RS05595 1257857 .. 1257880 -  -3.2  -3.02144   TTATGGCGGTGAAGA          GTTTCTAG TTATATTG CCAGAAAC           GCCACAGAACATCGC  45 273
JN178_RS05565 1248956 .. 1248967 -  -4.4  -4.19238   CTTTGAATTTGAAAA                GCTT AATG AAGC                 GCTTCAGTTTTCAAA  64 112
JN178_RS05540 1243836 .. 1243849 -  -6.7  -2.58418   GCGCCAGACAAAATT               GTGCT TATT AGCAC                GTTAACGCCTATTGT  55 192
JN178_RS05490 1234533 .. 1234548 - -10.4   -4.9138   ATTAGCGAAAGAAAA              GCCTCC TTAT GGAGGC               TTTTTTATTGCTTTC  93 135
JN178_RS05430 1219313 .. 1219323 -  -6.8  -3.45602   ATCAAATAGTCATAA                 TGCG CCC CGCA                 CTGACGCAGGGCGTT  63 211
JN178_RS05415 1217445 .. 1217495 - -19.3  -5.56673   ATCCAGAATAAAAAA GGCCGCATT-TGGAGTGACTCTAA AACG TTAGAGTCAAACCACAATGCGGCC TTTTTGTGCTAATCA 100 42
        pspF NONE
JN178_RS05370 1208112 .. 1208124 -  -4.8   -3.1544   CGACATTACAGCTAA                CACC AAAAG GGTG                AGTACAAGTAATGTG  52 63
JN178_RS05365 NONE
JN178_RS05360 NONE
JN178_RS05355 NONE
JN178_RS05350 1204357 .. 1204401 -   -16   -4.7416   TTAAAAGGCTAAAAA CGACATAATGAAAGGGCGGCT GCGA AGCCGCCCTTTCATTACTT-G CCCTTTTCTTTACTC 100 78
JN178_RS05300 NONE
JN178_RS05295 1192853 .. 1192873 -  -9.7   -5.5112   TTCACTAATAAAAAA            GGTAGGCGT TTA AAGCCTACC            TTTTTTGTAACTTGC 100 52
JN178_RS05270 NONE
JN178_RS05265 1185190 .. 1185219 -  -9.3   -2.7464   AATTCACGCCTAAAC       CGCGGTGTTAC TGAGGGTG GTGACACCGCG        ACATATCTATAAACT  72 3
JN178_RS05070 NONE
        pseF 1141866 .. 1141876 -  -5.4   -3.0701   ACAACCTTCACGTAA                 GACT CTC AGTC                 TGCATTAACTTAAAG  54 7
        pseG NONE
        pseI 1139719 .. 1139735 -  -2.3  -2.95007   CACCGAACAGAATTA              CTTTCAT GTT ACAAAAG              CTCCCAACTCATAGG  42 17
JN178_RS05050 NONE
JN178_RS05045 NONE
JN178_RS05040 1137170 .. 1137189 -  -2.9  -3.90318   TTATCAGTGCACAAA            TACTTCT GCTAAA AGAAGCA             ATGTTAAAGGGACTT  53 42
        pseB NONE
        pseC NONE
JN178_RS05025 1133750 .. 1133762 -  -2.7  -3.68836   ACATTCATTGAATAA                GTTAC GCT ATAAC                CAAGAAGTCATCCCA  49 14
JN178_RS05020 NONE
JN178_RS05015 NONE
JN178_RS05010 NONE
JN178_RS05005 NONE
JN178_RS05000 NONE
JN178_RS04995 1127363 .. 1127373 -  -5.4  -3.16071   GTGTACAGTAATATA                 TAGC TCT GCTA                 ATCGTGTGGCTGCTG  54 23
JN178_RS04940 1113797 .. 1113808 -  -5.8  -3.14982   AAACCTACGAATACA                GCGT GTTT ACGC                 CAGTTATTTTAATCA  57 3
        flgA NONE
        flgM 1099409 .. 1099423 -  -2.8  -2.79501   GATACCTGTATTACA               TTGCTT ATT AAGCTA               CTTACTAAATTACTT  42 80
        flgN 1098955 .. 1098965 -  -6.8  -2.78798   AGTGCCGAGTTAAAT                 TGCG TTA CGCA                 CTTACGCCAGAACCC  57 19
JN178_RS04850 NONE
JN178_RS04845 1096331 .. 1096354 -  -9.6  -4.13304   AAATTATCCCTAAAA          GTGTCACCGA AATT CCAGTGACAC           GAAAACGTTATGAAT  82 419
JN178_RS04840 1095762 .. 1095781 -  -9.3  -3.71378   GATTTGAGAGTGAAA            GGGTGCT TGAATT AGCACCC             TACTTTAGCAGTTTT  79 39
JN178_RS04835 1094943 .. 1094957 -  -4.3  -2.81182   CCTGAACATAAAGAT               CTAAC AGTGG GTTAG               TTAATAGTGTGGGGG  48 22
JN178_RS04830 1091449 .. 1091471 -  -6.3  -2.94912   GGGCTAATCGATATA           TCTGGGTTG CTTGC CAACCAAGA           ATATCAAATTGAAGT  55 281
        smrA 1090312 .. 1090352 - -16.9  -5.27938   AGTCTGAAAGAAAAA  TTCTAACGCCCGTAGCAGG TTT CCTGCTACGGGCGTTACTC  ATTTAGGGGGCTAAA 100 60
        mltF 1084321 .. 1084350 -  -2.9  -2.79501   GACACTCGCACGATA       GTACGGTGAAATA GGTA TATCTCACTCTAC        TTCCTATAAATGACA  42 92
JN178_RS04795 1082897 .. 1082928 - -13.8  -2.90763   GGGATATGTGAGAGA      GCATCAAGGCCAAT TAAT ACTGGCCTTGCTGC       ATAGAAATCTAGGTT  95 39
JN178_RS04785 1079635 .. 1079652 -  -8.4  -3.32279   TAGCACAACAAGAGA             GCGGCA GTTTTT TGCCGC              AGCTTTTACCGCTCT  70 51
         map 1058704 .. 1058727 - -10.4  -5.72616   ATGGACATAAAAAAA          GCAGTTGAAC ATTT ATTCAACTGC           TTCGAAATTAAGGAA 100 61
        glnD NONE
        dapD 1054926 .. 1054942 -  -9.4  -5.88197   GTAAAGACAAAAAAA              TGGCGC GTTAA GCGCCA              TTTTTCGGATAAATC 100 56
JN178_RS04665 NONE
JN178_RS04660 1051666 .. 1051685 - -13.6  -5.11112   AAATTCCAAGAAAAA            GGGGAACC GTTT GGTTCCCC             TTTTTTACCTATTTG 100 100
JN178_RS04645 1048641 .. 1048662 -  -3.7  -3.68767   ACAGTTTAAAAGCAA           CCGC-TCCAC AAG GTGAATGCGA           ACTTCTTCAAGTGTG  53 286
        queF 1047169 .. 1047187 -  -3.9  -2.67316   CAAGTTAACAACTCA            CAAGCTAC TGGC GT-GCTTG             ACGGTGATTCCCATA  45 11
JN178_RS04630 NONE
JN178_RS04625 NONE
JN178_RS04620 1043569 .. 1043591 -  -4.3  -3.65351   TCACTTCCATTTAAA          CTCAA-CTAT TTTG ATAGCTTGAG           TAGGCCCCTTCACCC  55 4
JN178_RS04615 NONE
JN178_RS04610 1040623 .. 1040642 - -12.2  -5.44119   TCGAGGGTAAAAAAA            TAGCGAGC ACAC GCTCGCTA             TTTTAAATGTGAATA 100 78
JN178_RS04605 1040118 .. 1040135 - -11.3  -4.18762   AACTCCTATTGAAAA             TGCGCCT ACTT AGGCGCA              TTTTATATTTCTACG  86 36
JN178_RS04580 NONE
JN178_RS04575 1033354 .. 1033371 -  -2.7  -2.72385   AAATGTAATCATAAT             TTCTATC TGTC GATAGCA              TTTGCTGCAACGGCG  41 10
JN178_RS04570 NONE
JN178_RS04565 NONE
JN178_RS04560 1030703 .. 1030714 -  -4.4  -3.78351   ATAAACTTCATCAAA                GGTT TGTC AACC                 GACTAAGGATTAATC  57 80
JN178_RS04555 1028971 .. 1028995 - -11.4  -5.28983   CTTAAAATAGAAAAA          CCGCCGAAAC TAGAC GTTGCGGCGG          TCATTGTATGGCAAT 100 66
JN178_RS04550 NONE
        galE 1027585 .. 1027614 - -15.1  -4.24294   AGGAATTAGTCAAAA       GTCGAGCACTTAG GCAA CGAAGTGCTCGAC        AGGCGGATTGCTTAA 100 37
JN178_RS04540 1026835 .. 1026849 -  -4.2  -4.72272   TGCCTTTATCAAAAA               CGCTTA TTT TGAGCG               TTTAGAATTTAGAGT  69 323
JN178_RS04485 NONE
JN178_RS04480 1015525 .. 1015535 -  -2.4  -4.56597   TGTCGGTGTTAAAAA                 CGCC AAC GGGG                 TATCGCTTTGCACTG  61 334
JN178_RS04470 NONE
JN178_RS04465 NONE
JN178_RS04460 1011726 .. 1011739 -  -2.3  -3.34646   AAGCTTACAAATAGA               CGGGT CATT ACTCG                TTCCAAGCATCACTG  45 19
JN178_RS04455 1010475 .. 1010498 -  -5.3  -5.72622   GCGATAAATAAAAAA          CCGTTTTGT GCTAGT ACTAAACGG           TTTTTTTATTAGTAC  95 40
        mutS 1003620 .. 1003652 - -11.4   -4.2535   ATAGTATACGCAAAA      TCATGTGGGCAGAC AATCA ATTTGCCCACATGA      TGCACAATTTGTATG  93 44
JN178_RS04425 NONE
         eno 1000482 .. 1000506 - -15.1  -5.67967   ATGAGGATAAAAAAA          TGCCAGTCAAC GTT GTCGACTGGCA          TTGCTTGTTTCGGCT 100 62
JN178_RS04415  999169 ..  999200 -   -16  -5.24796   CGCACATAACAAAAA      GCCCCCATAATTGA ATGT TCAGTTATGGGGGC       TTTTTTGCAGTGAGG 100 67
JN178_RS04405  992960 ..  992975 - -10.4  -5.83226   AATTCAACAAAAAAA              TGGGCC CTAG GGCCCA               AATACTCACAGCGAA 100 48
JN178_RS04400  991209 ..  991240 -  -6.6  -4.41348   CTTGCGGTAAACAAA      TTTTGGGCGCTGAGA GAT TCACAGC-CCCAAAT      TATTCAAGCTTACAG  74 281
JN178_RS04350  976635 ..  976651 - -13.7     -6.13   ATAGTTAAAAAAAAA              CCCGTGC TTG GCACGGG              TTTCTGTATGTTTAA 100 410
        leuA NONE
        leuB NONE
        leuC NONE
        leuD  971832 ..  971866 -  -4.4  -5.79526   ATATGCGAAAAAAAA     CGACATACACAG CGTTTAGCTTT CTGTATATGCCG     TTATTGATGTGCTTA  90 86
JN178_RS04325  970428 ..  970453 - -11.2  -5.53288   CTTAATCGAAAAAAA         GGCCACATGCG TTTAT CGC-TGTGGCC         TTTTTTAATTTTATT 100 62
JN178_RS04310  966952 ..  966967 -  -3.3  -2.57132   CGTCTTCTTTACAAC              CTTGT TGCATG ACAAG               TAGTAAACTAACGAT  43 114
JN178_RS04290 NONE
        srmB  962656 ..  962683 - -13.4   -4.1552   GATTGCTGGAACAAA        CCCTCTGCCGCA TGGA TGCGGCAGCGGA         GCGCACACGGACGTG 100 127
JN178_RS04280 NONE
        hemW NONE
JN178_RS04270  959693 ..  959713 -  -7.7  -2.55015   ACTTGAGTTAACTGA            TTGTTCACT ATT AGTAAACAA            TGTTTTGGGAAGTCG  61 77
JN178_RS04265  958758 ..  958774 - -12.3  -5.04249   GGTTCAAAAAAGAAA              GCCCGAT TAA ATCGGGC              TTTTTTGTATTAATT 100 35
JN178_RS04215  950184 ..  950195 -    -3  -4.58303   GCAAAGAGTACAAAA                TTGA TTAT TCAA                 AAATTGGTACTAGCA  63 119
JN178_RS04195  944828 ..  944843 -  -4.8  -3.55548   TAAGATGCGTTGAAA              TTGTTA GTCA TAACAA               TCACAAGCGAGCGCA  57 202
JN178_RS04190  944730 ..  944741 -  -5.8  -3.58396   CTTGAAAGGAAAAAT                GGTG GCCC CACC                 CTGACTTGAACAGGG  62 13
JN178_RS04160  938528 ..  938544 -  -2.3  -4.89233   TACTAAGAGTAAAAA              TGAAAAT ATA ATTATCA              ATTGGTATTGCATCG  66 69
JN178_RS04155  937561 ..  937587 -    -5  -4.65895   TTCCCGACGTAAAAA         CGGGCTAGGC TTTTTGG GGCTGGCCCG         TTTTTTTATTGGCAT  70 309
JN178_RS04125 NONE
JN178_RS04120  927093 ..  927118 -  -2.5  -3.02745   TTTATCTAGAAAGTA         CGCCAACCAGCA CAC CG-TGGATAGCG         ATTAATAATCGTATT  43 58
JN178_RS04110 NONE
JN178_RS04105  921754 ..  921764 -  -2.4  -4.41494   CAGTGGTAATCAAAA                 CAGG TTT CCAG                 AGGGTAAAACTAAAG  59 178
JN178_RS04100  919683 ..  919698 -  -4.6  -4.31293   TGATACATTAAGAAA              TGCGCT AGTT AGCGCC               GGGGTGTCGGCTGTG  66 486
JN178_RS04080 NONE
JN178_RS04075  915131 ..  915150 -  -4.9  -4.03234   TCGCTTGCAGACAAA            CTGGGCC TATAAC GGCCAAG             ATGCTTTCAGAGATA  63 265
JN178_RS04050 NONE
JN178_RS04045  907997 ..  908011 -  -7.8  -3.17051   GTGCGACCATTAACA               TGGCCG GTG CAGCCA               TTACCATTACCGTGC  64 327
JN178_RS04035  905802 ..  905820 - -10.2  -2.87206   GAACATGCACCAAAC             CACGTCGC CAA GCGGCGTG             TTTACCCTACATTAC  72 288
JN178_RS04005  896366 ..  896388 -    -7  -3.01243   TCCAGACAACAATTA           CCCTATCCGT GGC ACGTATAAGG           CATAGCGTGAGTCAG  61 55
JN178_RS03980  890578 ..  890590 -  -3.3  -4.26475   ACGTCAGAAAAAACA                CGCTT TTT AGGCG                AACACTTGTTCGCTC  60 96
JN178_RS03975 NONE
JN178_RS03970  888761 ..  888779 - -11.8  -3.24825   GCATGGGAATCAAGA             GAAGCTGA ACG TCAGCTTC             GCGACATTACGTTTG  83 472
JN178_RS03945  884543 ..  884568 - -13.3   -5.1523   CCGATAATACAAAAA         TGCCGCTAAGG GGAA CCTTGGCGGCA          TTTTTATTTGTGGTG 100 90
JN178_RS03915  876760 ..  876773 -  -6.7  -3.69455   ATAAAAATGGTCAAA               GACTG CCAT CAGTC                AGTGACACTACTGTG  65 86
        ppk1 NONE
         ppx  873018 ..  873033 -  -7.6  -3.90608   AAACATAACGAATAA              GATGAG TGAC CTCATC               TGCCCTTTATGCTCT  74 75
JN178_RS03900  872164 ..  872178 -  -7.2  -4.32649   ACGTCAAAAACTAAA               TGTTTC GGT GAAACA               GCATTTAGTGCGTTG  76 30
JN178_RS03890  869316 ..  869336 -  -5.4  -3.53563   ATAGTTGTCGCTAAA            GGGAAGAG AAACA CTCTTCTC            TTTAGCTTATAGATA  57 58
JN178_RS03865  862233 ..  862248 - -10.4  -5.65177   ACAGCCATAAAAAAA              GCAGCC AGTT GGCTGC               TTTTCTCTTTAAACG 100 49
JN178_RS03855  860666 ..  860678 -  -7.7  -2.78384   CGGCTGGGTAGTAGA                CAACC CAT GGTTG                ATAAAGCTCTTCTCG  60 246
JN178_RS03845 NONE
JN178_RS03840  855958 ..  855969 -    -3  -3.04894   AACCGCCTTCAAAAT                CATA ATGC TATG                 TTACGCCCATATCTT  43 21
JN178_RS03835 NONE
JN178_RS03820  849074 ..  849088 -  -2.9  -3.89226   TAGATAAAAAGAAGA               TACTT ATCAA AAGTA               GACTATACTGTCTAA  53 95
JN178_RS03815  847650 ..  847662 -  -5.5  -3.50722   TTTAAGTACGAAAGA                CCGAC TTA GTCAG                AGAGGGAGCGTTTTT  57 79
JN178_RS03810 NONE
JN178_RS03805  843638 ..  843667 -    -8   -3.8917   CGTTAACTACAATAA       GCTGTATGAAAA GATGAT TTTACATACAGC        TTCTACCAGGTCAGG  74 391
JN178_RS03775  835480 ..  835503 - -10.3  -2.76261   CGGTAAGGCTGAAAG          GGTGCGGTA AGAGCG CACCGCACC           TCTGGTAACAGAGTG  71 362
JN178_RS03745  829050 ..  829070 -  -2.5  -3.90856   AACGCTCGAATGAAA            CCGATCATC TAG AAAGATCGA            CAAATTGTTCAAAGT  53 252
JN178_RS03740 NONE
JN178_RS03735 NONE
JN178_RS03730  827820 ..  827830 -  -3.2  -3.48276   CTTTGTTTGACATAA                 GTAG TCT CCAC                 CGCCTTTAAACTTGC  49 43
JN178_RS03725 NONE
JN178_RS03720 NONE
JN178_RS03715 NONE
        nrtS  825429 ..  825452 -  -3.8  -2.93357   AAGCAGTTGAAAGTA          TCGCT-CACCG ACG CGGCGCAGCTA          CCTTAAGGATTGACG  47 28
JN178_RS03690  821473 ..  821483 -  -6.8  -2.65532   AGCAGGGCAAATTCA                 TGGC ACT GCCA                 TCGCCGAGTTTGATT  55 143
JN178_RS03680 NONE
JN178_RS03675 NONE
JN178_RS03670  818000 ..  818011 -  -4.4  -3.35046   TCAGTCCTTTAAAGA                TGCA AACT TGCA                 ACATCATGCTAGTCT  52 125
JN178_RS03665  817604 ..  817620 - -12.3  -5.18357   TAAGCGATTAAAAAA              GCCCTCT TCT AGAGGGC              TTTTTCGTTGTTAAT 100 47
JN178_RS03650 NONE
JN178_RS03645  813310 ..  813330 - -12.6  -5.63504   AATGGTATAAAAAAA            CAGCGCCA CATTT TGGCGCTG            TTTTTTTATCTTCGT 100 61
JN178_RS03640  811970 ..  811984 - -12.8  -4.99435   GCCAACAAGTAAAAA               GCGCCC ATC GGGCGC               TTTTTTATACTTGCT 100 63
JN178_RS03600 NONE
JN178_RS03595 NONE
        kdsC NONE
        lptC NONE
        lptA  803061 ..  803072 -  -4.4  -2.71712   TTCTTGCGCTCAAAG                TAGC CATT GCTA                 TTGGTTGCCCTCGTT  47 23
        lptB  802258 ..  802269 -  -4.4   -3.5764   AATTTTAGCTGTAAA                GATG GTTT CATC                 TACGTCTTATTTAAA  55 98
JN178_RS03570 NONE
         hpf NONE
        ptsN NONE
        rapZ NONE
JN178_RS03550  798716 ..  798750 - -13.1  -3.28447   TTATGCAGTAGAATA     TCGCAATTGTGATGA AGCTG TCATGACAATTGCGA     GCATAATGACGTTAT 100 97
        mgtE  797229 ..  797239 -  -6.8  -3.87815   GGCTACGTCGACAAA                 GCAC TCA GTGC                 GTAATGTGTATTTCG  69 49
JN178_RS03535 NONE
JN178_RS03530  794556 ..  794583 -  -8.4  -5.28176   TTTATCTATAAAAAA        GCACCCATAGCAC GTA GTGCAA-GGGCGC        TCTTGTCATACACAA 100 73
JN178_RS03490  788128 ..  788146 -  -8.2  -4.01888   AGGGTATACCAGAAA             CCTTAAGA AAA CCTTAAGG             TTTTTTATTGGGCAT  77 45
JN178_RS03485 NONE
JN178_RS03480 NONE
JN178_RS03475 NONE
JN178_RS03470 NONE
JN178_RS03465  784293 ..  784319 - -10.3  -3.37634   CAGTACTGTAAAAAG         GAAACCTTAAG AAAAG CTTAAGGCTTC         TTAATTCTATAAATC  79 39
JN178_RS03460  783511 ..  783525 -  -2.9  -3.69618   GTTAAGCTGAAAATA               CTTAT TTTTC ATAAG               TGAATGTCTTATTGA  49 12
JN178_RS03455  782822 ..  782837 -  -2.6  -3.78775   GCGGTTATGAGCAAA              CGCAGAT GTC AT-TGCG              CCTTCTCCTTTCGCG  51 18
JN178_RS03450 NONE
JN178_RS03445 NONE
JN178_RS03440 NONE
JN178_RS03435  778019 ..  778029 -  -3.2  -4.05669   AACCCTATAAAAACA                 GTGC TAC ACAC                 GTTACGCAATCTGTG  57 27
JN178_RS03430  777146 ..  777164 -  -4.6  -2.71791   ACTCCGGTGTTAAAC             CAACTTAC TGG ATAAGTCG             TTGGCATTTGTCACA  47 1
JN178_RS03425  776373 ..  776398 - -16.3  -3.12327   CTGGGAGAGGTAACA         CGCTCGCAATA GCAG TATTGCGAGCG          CTTTGAATTTAAGGT 100 46
JN178_RS03420  775480 ..  775512 -  -4.7  -2.74782   ATAAATTGTTAATGA      TGGTGGCTGGCGC GTTATGT GCGCCAGCTTACA      AACCCCCTATACCTA  50 77
JN178_RS03415 NONE
JN178_RS03405  771311 ..  771346 - -12.1  -4.15044   TTTGCGCTTAATAAA    TTAAAAGGCAACGCA GCAAAG TACGTCGCCTTTTAA     CTTGTGCAGTCTTAC  95 37
JN178_RS03400  770016 ..  770038 - -12.8  -3.32769   TTGGCAAACCATCAA           GCGCAATAGC TAA ACTATTGCGC           GTTCAAGCTAGCCAA  95 69
        lptD  755674 ..  755703 -  -5.7   -2.7185   ATTATTGGTTAATTA       CACTTGTGCACAC TTGC GTATGCTCAACTG        CGGGTTAATTTAAAC  51 30
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
JN178_RS03315 NONE
JN178_RS03310  748966 ..  748983 - -12.7   -5.4505   CCGGGGAACAAAAAA             GGGCTCC TTGC GGAGCCC              TTTCATTACGTATTT 100 61
JN178_RS03305  747264 ..  747283 - -13.6  -4.18018   TTGTTTTATCGAAAA            CGGCCAAC TAAT GTTGGCCG             TTTTTTTTATGCTTT 100 59
JN178_RS03280  742282 ..  742301 -  -2.9  -3.15405   GGCATAAAAGCAAAT            CAGCCTCA AGGTA TGAGG-TG            GGTAAATGAAACCTA  45 483
JN178_RS03250 NONE
JN178_RS03245  732560 ..  732575 - -10.4  -5.04601   TTTATAAAGTAAAAA              GCAGCC ATTC GGCTGC               TTTTATTAGACTATG  93 36
JN178_RS03240 NONE
JN178_RS03235 NONE
JN178_RS03230  727220 ..  727237 - -11.3  -4.40132   ATTAATTACAAGAAA             GGTCACC AAAT GGTGACC              TTTTTTTTATTTGAA  90 71
JN178_RS03165  708904 ..  708931 -  -4.8  -3.49419   GTCTCTTATAAAAAG        GGGGCGCA-AGCG TAG CAATGTACGCCCC        TTGGTGCAATTGGAA  56 63
        rdgC  707459 ..  707477 -  -4.5  -3.14468   GTTTACGAGACTTAA             GAAAGGC GCGGG GCCTGTC             TCTAGACAAAGCGGC  50 515
JN178_RS03150  706108 ..  706127 -  -9.3  -3.99324   CTTGATTAGCACAAA            GCCGATG TCTTAG CATCGGC             TTTTTTGTAGGAAGA  81 15
JN178_RS03140  702996 ..  703021 -  -8.9   -5.5604   TCAAGCAATAAAAAA         GCGCCTCATGC TTTA GCATGTGGTGC          TTTGTAATATATTAA 100 51
        plsY  699798 ..  699808 -  -4.6  -4.18465   TTTTAAAAAACATAA                 GCGC ATT GCAC                 GATTTAGCAATTTAG  64 125
        rpsU  696907 ..  696939 -   -10  -3.86524   ATAGGGGCCCAGAAA     CGCGAAAGGTGCTGC AATT GCAACACCTTTCA-G      ACTCGTTACTTAACC  81 46
JN178_RS03095  696279 ..  696312 -  -6.9  -4.47551   AGGGAAGTCATAAAA     TG-AGAACGACTAACA TGG CGTCAATCGTTCTGCA     TTAGACAAAAACTAG  78 60
JN178_RS03090  694120 ..  694145 -  -2.6  -4.66537   GTTTGCAATAGAAAA         GACAACATAC GTTTAG GTATGTTCCC          TATCTGCTGTAGTAC  62 328
        rpoD  692163 ..  692182 -   -10  -5.76949   TATGGGTAAAAAAAA            TCCCCAGC ATTT GCTGAGGA             TTTTGCTAATCAAAG 100 88
JN178_RS03055 NONE
JN178_RS03050  682447 ..  682461 -  -2.8  -4.08064   AATTCCGTTCTAAAA               GCTATT CGC AAAAGC               TTGGGTCAAGTTTGT  55 12
JN178_RS03045  681184 ..  681202 - -14.6  -2.83403   CTGTGCGCATTAAAT             GCCCGTAC GTG GTACGGGC             TTTAATCTCTTTTAT  95 59
JN178_RS03030  677494 ..  677531 - -14.3   -3.4268   GTATAATGGTAAATA   GCAACAAAAAGGTCGCC CTAG AGCGACCTTTTTAGTGC    GTACAATACCGCTAA 100 41
        ccoG NONE
JN178_RS03010  673431 ..  673444 -  -2.4  -5.13722   TGTATGAAAAGAAAA               TGTC TAATGT GACA                TTGAGTTTACCGTTG  69 152
JN178_RS03005  671231 ..  671245 -  -9.2  -5.59534   AACGATAATAAAAAA               GGGGCC GAA AGCCCC               TGTTAATGCGTGATG 100 41
JN178_RS03000  670385 ..  670402 - -12.7  -5.29445   GTTGAATAATAAAAA             TGGGCGC TAAT GCGCCCA              TTTTATAAGGTATAT 100 47
JN178_RS02995  669682 ..  669718 -  -8.8  -3.14132   GCGCGCGGTTATTAA    TGCCGTTGGTGCAG TCGGAATAC CCACACCAACAGCA    ATTAAACCAACATTG  67 71
JN178_RS02920  648908 ..  648934 - -15.2  -3.93251   TGAAAACAAAACCAA         GAGGTTGCGCCA TTG TGGTGCAACCTC         GATACCGCTAGTTGC 100 33
JN178_RS02915  647014 ..  647026 -  -3.4  -3.46808   AAAATCAAGCTAGAA                TGCA TACTC TGCA                TGGCCACAATCCTTA  50 279
JN178_RS02885 NONE
JN178_RS02880  641361 ..  641371 -  -8.2  -2.76911   ATTGAAAGAACCAAT                 GCGC AGC GCGC                 TGAATGGGGATATGG  60 403
        epmB  634660 ..  634679 -  -3.4  -4.88163   CCAACATAAAATAAA            GGGGGGCA ATTC TGCCCACT             TTTTTACTTTGCTAC  69 254
JN178_RS02840  634152 ..  634168 -  -9.4  -2.77233   GTAGAATCGGTAAAG              TGGCGC TGTAT GCGCCA              AGAAATTAGGGCTTT  72 62
JN178_RS02830  631812 ..  631828 -  -2.9  -2.71791   AGGCTTGGGTGAAAT              GAACCCG CTG CAGCTTC              GTGAAACCACTATGG  41 192
        tolC  625731 ..  625748 -  -6.9   -5.4251   TTTACACACAAAAAA             GGGCAGC TTTC GCCACCC              TTTATCGCGAGTCTC  91 50
JN178_RS02790  624518 ..  624547 -  -9.4  -5.45652   AGGGGTAATAAAAAA       GGCCACTTCA TTTATTATTG TGAAGTGGCC        TTTTTTGACTGAAGT 100 49
JN178_RS02780  619448 ..  619473 -  -7.6  -6.15717   CAAATACAAAAAAAA         GAACTGGCAC TATTTT GCGCCAATTC          TTTTTAATTAGAAAA 100 98
        cobA  617874 ..  617902 - -13.1  -3.45571   TTTTTCAAACAGTAA        CTGCTCCGCACAC GAC ATGCGCGGAGCTG        CAAAAAGTAATAGTG 100 153
JN178_RS02770 NONE
        rapA NONE
JN178_RS02740  607532 ..  607546 -  -4.2   -2.6732   CTGCAATCCAAATAT               CGCGAA TAG TTCGCT               GCCCAGCGTTTATTC  47 51
JN178_RS02735  606464 ..  606477 -  -6.7  -3.31443   TTCATAACAATCTAA               CTGCT CGTT AGCAG                GCCATTGCGTAGCGC  61 100
JN178_RS02730  606079 ..  606105 -    -3  -2.71003   GTAAGAGAGGAGAAC         GCGTGGGT TAGGGGCGAAC ACCCACAC         AATCTAAAGGGCAAT  41 6
JN178_RS02725 NONE
JN178_RS02720  601957 ..  601970 -  -6.7  -2.94333   GCGGAAAACCAAGCA               CAGCA ATGA TGCTG                GATATAGACCACTTT  56 443
        mutH  593881 ..  593891 -    -4  -3.28712   GCGCCTTTCTGATAA                 GAAA AAC TTTC                 GACGTTTTATTTTTC  50 182
JN178_RS02650 NONE
JN178_RS02645  582992 ..  583012 - -12.6  -5.24531   ATGCCTTATAAAAAA            GGGCACGT GGAGA ACGTGCCC            TTGGTTATATATTCA 100 62
JN178_RS02640  581020 ..  581039 - -12.2  -4.08042   TTGAGCATAAAAACA            CAGAGGCA TTAT TGCCTCTG             CTCTGTGTCACATTA  95 72
        ftsB NONE
        ispD NONE
        ispF NONE
        truD  578334 ..  578352 -  -9.6  -3.45776   TGAAAGGCAGTATAA             GGGCTAGT ATC ACTAACCC             CCATTAGGCCAGCTA  77 61
JN178_RS02615 NONE
JN178_RS02610 NONE
JN178_RS02605 NONE
        rpoS  574984 ..  575001 -  -8.4  -5.26316   TCATCTGACAAAAAA             GCCAGC GTAGTT GCTGGC              TTTTTGCGTTCAGTT 100 53
        ispB  570031 ..  570045 -    -5  -3.14468   TCGTACCAGAGTCAA               TTGCAC TGG GTACAA               CGGCAGCGTTAGGTG  52 433
        fadB NONE
        fadA  562127 ..  562140 -  -9.5   -5.4833   GCAGCCAACAAAAAA               GGGCC CGAA GGCCC                TTTTAAAAACTTAGC 100 63
JN178_RS02535  558103 ..  558119 -  -2.9  -3.36823   GTCCTTAAAACTTAA              CGCCC AACTTAG GGGCA              ATAACACGTAGGCTA  46 120
JN178_RS02530  557648 ..  557706 -    -9  -2.99937   TAACACCCAAATAAG GGGCAGTAACACGTGGGCTAAAATC CGAGCGAAGC GA-CAGAGCCCACGTGTTACTGTCC CAGGGAGCTTGCGAC  69 57
JN178_RS02525  557013 ..  557025 -  -6.2  -3.22878   CAATGAAACCTAACA                CCCC GCTTA GGGG                CAATAACACGTGGGC  58 101
JN178_RS02520  556547 ..  556601 - -15.2  -3.39028   CATAACTTCCAAATA TGGGGCGCAAACACGTGTGCAA-TA ATGGCG TAGCCGCGCACGTGTTTGCGTCCCA GCGAGCGTTAGCGAG 100 57
JN178_RS02515  555704 ..  555718 -  -7.2  -3.63515   CTTTATGTTGAAGAA               TCAAAC GGT GTTTGA               CAGTGAGCGCTTTTT  67 516
JN178_RS02500 NONE
JN178_RS02495  551854 ..  551912 -    -9  -2.99937   TAACACCCAAATAAG GGGCAGTAACACGTGGGCTAAAATC CGAGCGAAGC GA-CAGAGCCCACGTGTTACTGTCC CAGGGAGCTTGCGAC  69 57
JN178_RS02490  551312 ..  551329 -  -9.1   -3.1634   CCTCAAAGCACCTAA             CGCCCCA ACTT TGGGGCA              CAAATACATGGGCTA  70 130
JN178_RS02485  550426 ..  550477 -  -9.3     -3.94   CTAACTTTTAAATAA GGGGCGCAGGCGCGTGGGCTA AAATGCGAAG CAGCCCACGTGAATGCGTCCC AGCCTGCGGCAGCAG  81 403
JN178_RS02480  549951 ..  549967 -  -6.5  -3.28119   AGGGAGTCATACCAA              CGCCC AACTAAG GGGCG              ATAACACATGGGCTA  61 113
JN178_RS02470  547218 ..  547232 -  -7.2  -3.63515   CTTTATGTTGAAGAA               TCAAAC GGT GTTTGA               CAGTGAGCGCTTTTT  67 516
JN178_RS02460  545074 ..  545125 - -12.3     -3.94   CTAACTTTTAAATAA GGGGCGCAGACATGTGGGCTA TAATGCGAAG CAGCCCACGTGTATGCGTCCC AGCCTGCGCAGCAGG  95 395
JN178_RS02455 NONE
        lspA  543502 ..  543553 -  -7.9  -3.94402   ATAACTTTTAAATAA GGGGCGCAGGCATGTGGGCTA AAATGCGAAG CAGCCCACGTGAATGCGTCCC AGCCTGCGCCAGCAG  74 352
JN178_RS02445  542805 ..  542818 -  -3.7  -3.63569   CTAACTTTTCAATAA               CGGGC GCAG GCACG                TAGGGCATAATGGCG  53 120
JN178_RS02440  542264 ..  542281 -  -9.1   -3.1855   CCTTGGAACACCTAA             CGCCCCA ACTT TGGGGCA              CAAATACATGGGCTA  70 130
JN178_RS02435  541879 ..  541910 -  -3.7  -4.59773   GCTTAGGGGCAAAAA      TACGTGGGCTA TAATGCGAAG CAGCCCACGTG       TTTGCGTCCCAGCGA  66 94
JN178_RS02430  541407 ..  541418 -  -7.2  -2.57344   CATGTGGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGAATGCGTC  59 74
JN178_RS02425  540797 ..  540818 -  -2.9  -4.83169   ACGCCGCCATAAAAA           GGCTAGCAA CTTG TTGCGAGTC            CAGCGCTGAAAACGC  65 58
JN178_RS02420  540382 ..  540395 -  -3.7  -3.63569   CTAACTTTTCAATAA               CGGGC GCAG GCACG                TAGGGCAAAATGGCG  53 97
JN178_RS02415  539996 ..  540026 -  -3.8  -3.56366   AATAAGGGGCGCAAA       CGCGTGGGGCAT ACTAGCG AAGCGCCCCGCG       AAGCGGGTTGTGACT  53 73
JN178_RS02410  539231 ..  539241 -  -6.8  -3.65812   TGCTTTGCAAGACAA                 TGCC TGT GGCA                 TCAAAGGTAAAGCTA  65 391
JN178_RS02395 NONE
JN178_RS02390  537484 ..  537501 -  -3.5  -2.60032   CTTTTCCTAAAAAGT             TTATAGCG GGC CGC-ATAA             TGGGTAAAACTATGC  43 35
JN178_RS02385  537124 ..  537142 -  -5.9  -4.77036   GCGTATGAGTAAAAA             CACGCAG GGGCT CAGCGTG             TTAGCGCCCCAACGA  77 94
JN178_RS02380  536445 ..  536470 -  -8.3  -2.53876   GCGCAGCGTAATTCA         GTGTCTAGCTG CTAT CTGCTAAACAC          AGATCTTGCAAAGCT  64 18
JN178_RS02375 NONE
JN178_RS02370  535536 ..  535547 -  -2.2  -5.34381   AAAGTTAAACAAAAA                GTAC ACAA GCAC                 CAGCGTGTTTGCATT  72 90
JN178_RS02365 NONE
JN178_RS02360  534445 ..  534459 -  -4.3  -3.46271   CATAAACAGGTAGAA               GAATG CTATC CATTC               GCAATGTTATCCTTA  53 62
JN178_RS02355 NONE
JN178_RS02350  533513 ..  533523 -  -3.2  -2.84617   TACCGCAAAAATCTA                 CTGC TGC ACAG                 TGAAAACATCAATCT  44 59
JN178_RS02345  532944 ..  532966 -  -9.9  -3.89614   GGGAATTCGTATAAA          GTCGGGC-AC GAAA GTAGCCCGAC           ATTTACACGACAGTG  83 53
JN178_RS02340 NONE
JN178_RS02335  531819 ..  531833 -  -4.2  -3.05224   ATATGTTTTGAAAAG               GAACTC ATA GTGTTC               TCTCATGTAGTGACA  49 59
JN178_RS02330  531413 ..  531428 -  -3.2  -2.60075   TGTTCTTCAAGTAAC              GCGATA ACTT CACCGC               CAGAAAGGTCATCAA  43 55
JN178_RS02325 NONE
JN178_RS02320  530586 ..  530602 -  -6.5   -4.2237   AAAGTAACTTCAAAA              GCCATCA GTT TGTTGGC              CGACACCATCATTAA  70 56
JN178_RS02310  528067 ..  528077 -  -4.6   -3.6074   AACAACGACAAAAAG                 GCGC GCA ACGC                 ATTAGTCACGCCAGT  55 292
JN178_RS02285  523148 ..  523174 -  -5.8  -2.76249   GAAATAGCGTAAGCA         CTTTAGCGCAGC GTT GCTGCGATTAAA         AGTGTACTACGTCGA  54 21
JN178_RS02280  522705 ..  522718 -  -5.3  -2.57132   TGTCTCCTCTACAAC               GGATA ACCC TATCC                CTTACGCACTTTGAA  51 27
JN178_RS02275  522212 ..  522223 -  -4.4  -2.51223   GTTAAGAAGACACAG                CGTA ATTA TACG                 TTTACAGCACAAAGG  47 176
JN178_RS02270  521426 ..  521452 - -13.1   -5.4492   GAGAGATACAAAAAA        GCCCGATG-CAC CTAG GTGTCATCGGGC         TTTTTATTTTTATTC 100 78
        murQ NONE
JN178_RS02255  517078 ..  517098 -  -3.1  -3.85698   TCCCGGTTTTATAAA            CCAGCGACC CCA GCCCGATGG            CCTTAAAATGATTGC  53 463
JN178_RS02240  512619 ..  512644 -  -4.7  -2.73243   ATTGAGCTGGTAAAT         TGAGCGGGTAA CCTG CTACCCAATCA          TTAATACGCTAGCAA  50 15
         ggt  510772 ..  510804 -    -5   -5.1517   AAAAGAAAGGAAAAA      CGGTTAGTGT TTATGGCGTTCCC ACACTAACCG      CTGAAAGTTTACAAA  79 62
JN178_RS02225  509555 ..  509569 -  -4.2   -3.1886   ACGCAATCTTACTAA               TACGCG CCT CGCTTA               AATATACTGCGTCGT  50 7
JN178_RS02195  503800 ..  503818 -  -8.8  -4.68545   ATTTAAGATACAAAA             TGGCTTGC ATC GCAGGCCA             TTTTTAATTATTCCC  86 55
JN178_RS02185 NONE
JN178_RS02180  500059 ..  500082 - -15.4  -5.46129   CAAGAAACCAAAAAA          TAGCCGGGTT ATCT AACCCGGCTA           TTTCGTTGAACTAAT 100 43
        nhaA  494063 ..  494082 - -12.2   -5.0916   TGCTGAAGACAAAAA            TGCCTGCA TAGC TGCAGGCA             TGAATGCACATTTGA 100 64
        rhlB NONE
JN178_RS02115  484902 ..  484939 - -18.7  -3.52192   TGTAACGTTATAGAA   CAATAAAAAAGCCGCGA TTAT TCGCGGCTTTTTTATGG    ATAGTCACCTAGGTT 100 39
JN178_RS02075  477975 ..  477986 -  -3.6  -3.91066   AGTGAAACAAGATAA                CGCA ATAC CGCG                 CCATGCCAATAAAAA  55 225
JN178_RS02065  473100 ..  473116 - -15.1   -3.9941   CCTCCGAGAATGAAA              GGGGGCG TTA CGCCCCC              TTGGTGTCACTTATT 100 36
        yfcC NONE
JN178_RS02055  470338 ..  470351 -  -9.5  -5.64873   CGTAATAACAAAAAA               GGGCG TTTA CGCCC                TTTTTGCTTTTTTAG 100 99
        rsgA  459937 ..  459947 -  -8.2  -4.00042   GTGTTTAGCAAAGAA                 CGCG CTA CGCG                 CCAGGTGGTTGGCTA  77 19
         psd NONE
JN178_RS01995 NONE
JN178_RS01990  457201 ..  457227 -  -5.2  -3.75153   TGCCGTCAATGTAAA         TGCTGTAAAAAC ACC GTTTTTACTGAA         CACCTCTCAACAGAG  60 82
JN178_RS01970 NONE
        grxC  453498 ..  453513 -    -9  -3.05816   TGACGCTTTACGCAA              GACCCA ACAT TGGGTC               AAGTTTACTTTGCGC  70 2
        secB NONE
        gpsA  451856 ..  451871 - -10.4  -5.28176   GTTACTCATAAAAAA              GGCTGC ACAT GCAGCC               TTTTTTAAATTGTGA 100 42
JN178_RS01930  446945 ..  446967 - -12.1  -5.33921   AAATTAAGTAAAAAA           GCGTTGATG AGTAG CATCAACGC           TTTTTCATAACTACG 100 56
        argC NONE
        argB NONE
JN178_RS01910 NONE
JN178_RS01905 NONE
        argH NONE
        argA  439206 ..  439217 -  -2.2  -3.68325   GAGATTTTAATATAA                CCTC TTCA AAGG                 CATTGGGATAGTGCT  48 67
JN178_RS01890 NONE
JN178_RS01885  435748 ..  435760 -  -9.1  -3.59698   CCAGCCCACATACAA                CAGCG TGT CGCTG                AAATAGGCGCCGCTG  75 210
JN178_RS01870  432566 ..  432590 -  -4.1  -4.06281   ATTGTAAACAAAACA          TGGGGTGAAGA CGG TCAACTCCCCA          ACAGACACAGTGCCA  59 153
        pilM NONE
JN178_RS01840 NONE
JN178_RS01835 NONE
JN178_RS01830 NONE
JN178_RS01825  421043 ..  421060 -  -8.4  -6.20267   TCAAAAACAAAAAAA             CGCGCT GTAAAA AGCGCG              CTTTTAGGCTCGTAT 100 48
        aroK NONE
        aroB  419132 ..  419147 -  -3.2  -3.88498   CTTCGATATACGAAA              TTAGCC AAGT GGCTTA               AACATATTTATTGTA  55 74
JN178_RS01810  417649 ..  417667 -  -6.6  -3.55814   CAGCAAGTGAGATAA             GCGCGCGA TTT TAGCGCAC             TATTAGGCAATAGGT  65 44
JN178_RS01805  416286 ..  416296 -  -4.6  -2.62184   TTTTCTTGGATAGCA                 GGCA AGT CGCC                 GTCATTTCAGTTTCA  46 338
         rpe NONE
        trpS  412927 ..  412939 -  -3.3  -3.24032   AGTTGTCAATTAACA                GCAAC ACA GCCGC                GATAAACCTCTGTCA  48 57
JN178_RS01775  412227 ..  412252 -  -3.9   -2.7263   ACTACTTCGCTAAAC         CCGGCGTGGGTA AAG TACCCT-GCGGG         TGGATTGATATGCCC  45 113
JN178_RS01770  410942 ..  410964 - -10.7  -2.86601   TTGAGTAAAAAGGTA           GCACTCATT CGAAT AATGAGTGC           ATGAATATCCAATAA  76 48
JN178_RS01765 NONE
        astA NONE
        astD  406800 ..  406830 - -11.2  -3.65522   TATGTAGGGTAATAA       TGTGGCTATCACCA ATA CAGTGTTAGCCACA       GTAGTATTACATTGT  83 32
JN178_RS01750  405873 ..  405901 -  -6.7  -6.06723   TTGGCTAAAAAAAAA        GCCCACACACT GCAATTA AGTGAATGGGC        TTTTTGTATGCTTAA 100 54
JN178_RS01730  397039 ..  397062 - -12.6  -2.54803   GCAAGACAGCAAGAC          TAATGGCACT AGTG AGTGCCATTA           TTTTCAGACAGTACC  89 10
JN178_RS01710  390901 ..  390927 -  -3.6  -4.47217   AATCATCAACGAAAA         CGGCGCTAGTGT ATA ATACGAACACCG         CTAAGTCATCATGAC  64 119
JN178_RS01705 NONE
        hemL  388541 ..  388556 - -11.8  -5.53079   AAAAGATACAAAAAA              GCCCCG ATAT CGGGGC               TTTTGCTTTATTAAT 100 47
JN178_RS01675  382779 ..  382795 -  -7.2  -3.34227   GGAGTAAATGATTAA              CGCCCC TCATT GGGACG              TTTTTTAATCCGAGC  64 5
JN178_RS01660  379001 ..  379011 -  -6.8  -3.27408   CTGCACTGAAACATA                 CTGC GTG GCAG                 CTATCGTATTGCAAA  61 374
JN178_RS01655 NONE
JN178_RS01645  374426 ..  374438 -  -6.9  -3.49584   TCAAAAAGAGATGAA                GGGGC GCT ACCCC                AAGCATTTTTGGCCG  62 114
        thpR NONE
        purU  370129 ..  370142 -  -2.4  -2.70022   GCTAGCTTACATAAC               TCCA TTGCAT TGGA                TATTGATTGAGGTCA  40 56
JN178_RS01625  369685 ..  369697 -  -7.7  -3.60296   GAGCTTCACTGCAAA                GAAGC AGG GCTTC                GCGTTTGCATGATTG  69 183
JN178_RS01615  366774 ..  366791 - -11.3   -5.4505   TGGGTCAATAAAAAA             GCCACTC AATA GAGTGGC              TCTCATAGAGTGGCT 100 61
JN178_RS01610  364458 ..  364473 -    -4  -3.65827   GAAGTGCCATTCAAA              GAAGAT TCTC ACCTTC               TCACCATTGGCGCAC  53 178
JN178_RS01595  360577 ..  360588 -  -2.2  -3.92522   TCTGAACCTGACAAA                CGCT CTAA AGCA                 GGTAAGGCTGGGCGA  53 411
JN178_RS01585 NONE
JN178_RS01580  356987 ..  357002 - -10.4  -5.07107   CAAAGTCTTAAAAAA              GCCGCT TTCG AGCGGC               TTTTTTGTTTTTATT  93 36
        tadA  349187 ..  349215 - -14.7  -5.22312   ACTTACATCAAAAAA        TAAAAAGCCCAGC TTA GCTGGGCTTTTTT        ATGTATTTAACGGCA 100 54
JN178_RS01510  345657 ..  345687 -  -5.4  -4.82863   TAATTATAAAATAAA       TGTAGACTGCCAAA TGT TCTGTCAGCCTACT       TACGATTGCCTATAT  74 35
        gpmA  344706 ..  344721 - -10.4  -5.54885   AACACCAATAAAAAA              GCCTGC ATAA GCAGGC               TTTTTTGTATCTAAA 100 51
JN178_RS01415 NONE
JN178_RS01410 NONE
JN178_RS01405  324763 ..  324779 -  -2.1  -4.37502   AGCAGTATAGGAAAA              CAGTGGC CTA GCCAAAG              AAAGCCTAAATATAC  59 31
JN178_RS01395  320269 ..  320293 -  -5.5  -3.15574   TGAATTTCACGAAGA          TGCGCGCCGAC ATA GGCTGCCCGCA          ACACGAAGATATTCT  54 429
JN178_RS01385  318992 ..  319009 -  -4.1  -2.84459   AATAGTACTAGCACA             GGTGTTG CCGG CAATACC              TGTTTTAATGCGTAG  45 30
JN178_RS01380  317089 ..  317101 -  -5.5   -3.1886   ACTCAATTGCACTAA                GCGGT GCG ACCAC                TCATATCAATAGACA  54 9
JN178_RS01360  310542 ..  310581 -  -7.2  -2.78384   TCTGCTGCCATGACA  GTGCC-GCTATTTGTAGGC ATT GCCGACAAACATCAAGCAC  AAGTGGTTGAAGCCA  58 381
JN178_RS01340  304462 ..  304480 - -14.6  -5.05505   AGTAGAAATGAAAAA             GCCGATGC AAT GCATCGGC             TTTTGAGAAATAGCG 100 52
JN178_RS01335  303599 ..  303616 -  -9.9   -3.9373   TATGCAAAATCGAAA             GCCTTAC ATCA GTAAGGC              TTTTTTGATCCAATC  83 50
JN178_RS01300  297109 ..  297125 - -12.3  -3.15027   ATGCGGTATTAAAAT              CACCGAC CGT GTCGGTG              CCAGTGCCTGGCGCG  87 105
JN178_RS01280 NONE
        trmB NONE
JN178_RS01270  292737 ..  292762 - -12.7  -3.49924   GCTAAATTAGCACAA         GCATAACCGTT TTTT AACGGCTATGC          TGCTTGATATACAGA  95 20
        glgA  291145 ..  291158 -  -3.7  -4.08948   TAAGTTGATAAACAA               GCGCG GATC CTCGC                TACCAAAAAGCGCCA  59 47
JN178_RS01260  289326 ..  289339 -  -2.4  -2.53263   CTTATTGTTAAGGTA               TTGG GGTTAG CCAA                TAAATTTCAAGAAAA  39 58
        arcA  288461 ..  288479 - -14.6  -5.87688   ACAACGCAAAAAAAA             GCCGCTAC ACA GTAGCGGC             TTTTCTATTTAATCG 100 56
JN178_RS01245 NONE
JN178_RS01235  282325 ..  282353 -  -9.6  -4.20368   TCAGTTTAAGAGAAA        CGGCATACGC TGCAGAATG GCGCATGCCG        TCTTGATAATTACTC  85 35
JN178_RS01230 NONE
JN178_RS01225 NONE
JN178_RS01220  277814 ..  277827 -  -2.3   -4.1899   GTATTTGATTGAAAA               CGGGA AGAT TACCG                CACCAGTGAAAGGGG  57 210
        glpK  261536 ..  261554 -  -7.4  -5.60993   TTTTGTATAAAAAAA             GTGCGG GCTATAA CCGCAC             TTTATTAACAATCAG  93 56
JN178_RS01150  258430 ..  258451 - -11.6  -4.25458   AAGCTCATGAATAAA           TGGCAGGG TTTTAC CCCTGCCA            TAACTACACACTTTT  93 40
JN178_RS01145 NONE
JN178_RS01140 NONE
JN178_RS01135  254533 ..  254550 -  -6.3  -3.67843   GAAAACTGGCAAGAA             GGATGCT CAAA AACATCC              TCCTTTAAGACGAAA  62 54
JN178_RS01130  252125 ..  252154 -  -7.9  -5.74086   AAAGCAAATAAAAAA       GCGAGCTTAGG GCACACAT CCTAAACCCGC        TTTTTGTCGGGACAA 100 63
JN178_RS01085  240880 ..  240905 -  -8.3  -3.71291   AAGAAGGGGAAAATA         TG-GGCTCGCGC TAG ACGCGAACCACA         GAGTCCCGTTTAACG  75 10
JN178_RS01075  238644 ..  238655 -    -3  -3.92641   AACCTCACCCAGAAA                CTTT TATA AAAG                 CTGCAGATTCGATGA  54 158
        uvrA  233693 ..  233728 -  -8.4  -2.57423   ATATTTATCAATTTA    TGCGACAAAATGAC TGCGTTTG GCCATTTTGTCGCC     GTAACATGCTGATCT  65 46
JN178_RS01055  233389 ..  233410 - -13.1   -5.2197   GATAAAAACGAAAAA           GCGTTAGTG ACAT CACTAACGC            TTTTTTTGTCGCTTA 100 38
JN178_RS01045 NONE
JN178_RS01040 NONE
JN178_RS01035 NONE
JN178_RS01030 NONE
JN178_RS01025  227198 ..  227224 -  -7.4  -2.64765   GAATGACATAACTGA         CAGATCTGAC AGGGGGG ATCAGATCTG         GTTACATGTTTTTTT  59 64
JN178_RS01020 NONE
JN178_RS01015 NONE
JN178_RS01010 NONE
JN178_RS01005 NONE
JN178_RS01000 NONE
JN178_RS00995 NONE
JN178_RS00990 NONE
JN178_RS00985 NONE
JN178_RS00980  217565 ..  217578 -  -2.3  -3.53722   GTGATAGCGAGATAA               CACGC AAGC GGGTG                TTTTATCTCGCTATC  46 49
JN178_RS00975 NONE
JN178_RS00970  216012 ..  216023 -  -3.6  -3.56092   TGACTATGCGCCAAA                GCAG GGGG CCGC                 GCAAATATACATGTG  50 288
JN178_RS00955  212649 ..  212666 -  -9.9  -3.47227   GGTGAAGCAGTAGAA             GGGTTCT AGAA AGAACCC              TTTTTCTTATCAGCC  79 57
         mpl NONE
JN178_RS00930  208048 ..  208069 -  -2.9  -2.74322   CGCAACGGCGCAAAT           CCTGTTTGC AAAC GCGAACATG            GTTATTCCTCTGAAT  42 27
JN178_RS00925  207197 ..  207210 -  -3.1  -3.13403   TCCTTTTTACCAAGA               CAGTC GCGT GACTA                TGGTTGTCCTGTACG  46 74
JN178_RS00915 NONE
JN178_RS00910 NONE
JN178_RS00905 NONE
        lysA NONE
        dapF NONE
JN178_RS00890 NONE
        xerC NONE
JN178_RS00880 NONE
JN178_RS00875  198162 ..  198187 -  -5.4  -4.66163   ATCGTCATCCAAAAA         TACGCCAAGG TGTGCT CATTGGCGCA          GGTGCTAAAATTTTG  74 245
        uvrD NONE
JN178_RS00860  193724 ..  193739 -  -2.5  -5.28942   TACCGCAAACAAAAA              CAAGC ACAAAA GCTCG               CCGTAGAATAACTAG  73 37
        recQ  188278 ..  188288 -  -3.2  -4.58685   AAAGCGCGTCAAAAA                 GGCT CAA AACC                 GTTTTTTATCAAACC  64 317
JN178_RS00830  187217 ..  187231 -  -4.3  -4.02719   TGATTAAAGACCAAA               CTTAG ACACG CTAAG               TCCATGGCGTAGTGA  59 264
JN178_RS00825  184259 ..  184279 -  -4.8  -3.57144   GTCTTGATTTTTAAA           TCCCCGATT AACA AAT-GGGGA            TATTGTGCCAAGACA  57 107
        ribA  183501 ..  183518 - -12.7  -5.80248   GAATAGATAAAAAAA             GCCCGCA AGGT TGCGGGC              TTTTTTCGGTTGCGA 100 41
JN178_RS00815  181887 ..  181916 -  -7.1  -3.77413   AACAGCAGTAAAAGA       GCCCCGACAGC GCAGATCA ACTGCCGGAGC        CAAAAGGGTTAGTCT  70 34
JN178_RS00805  179260 ..  179274 -  -2.8  -2.80796   GGGGATCACTTAAAG               CTCGAA GCG TTCGAT               GGCGGTTTGCATTTT  42 5
JN178_RS00800  178720 ..  178747 -  -2.7  -3.39618   GCCAATCCTAAAAAG        CGAAGGCTA TGAGCAGAAG CAGCCCTCG         GCATCGGCGTTAACG  47 4
JN178_RS00795  177818 ..  177828 -    -4  -3.21551   AAAACGACTGAGCAA                 TAAC CTC GTTA                 ACCAAACCAACGACC  48 23
JN178_RS00760  168091 ..  168107 - -10.8  -4.57569   TCATTTGCTTAAAAA              GCCCGC GTAAA GCGGGC              TTTTGCGTATTTTTA  90 49
JN178_RS00750  166260 ..  166272 -  -6.3   -2.9302   TTTAACTACAACAAT                CTACA TAG TGTAG                TGTGTTTTTTGCTCG  56 114
JN178_RS00745  163081 ..  163096 -  -3.9  -4.07675   CGAAAAGCAAGCAAA              GCGCC TTGCCG AGCGC               ATCGAAGACAGTTTG  59 267
JN178_RS00735  160809 ..  160842 - -12.5  -3.89822   TAGGTATTTGATAAA     GCGCACAAAAGAGGG CGAG CCCCCTTTTGTGCAA      AAAGACTCCTAAAAC 100 34
JN178_RS00730  159890 ..  159902 -  -4.7  -5.75599   CAAAGCATAAAAAAA                GGCGG GGA CCGCG                CAAAATTCACCAATG 100 288
JN178_RS00720  157576 ..  157594 -  -7.4  -3.34344   GTACCTGTTAAGCAA             CTCACTCA CGG TGAGTGTG             ACGCCATAGCAAATA  63 282
JN178_RS00675 NONE
JN178_RS00670  145864 ..  145908 -  -3.8  -5.04249   GTGGCAAAAAAGAAA TGTTA--GCTATAACGGCGTCA TGA TAACGCTGTTATAGCGCTAACT TAGTATCAGTCACAA  73 55
JN178_RS00640  140313 ..  140329 - -10.9  -3.70104   AACTATTGAAGAGAA              CCCCTTT GAA AAAGGGG              ATATTCACCACGCCA  83 169
        hemC NONE
JN178_RS00625 NONE
JN178_RS00620 NONE
JN178_RS00615  135082 ..  135093 -    -3  -3.72231   CTATATATCCAATAA                GTAA GTTT TTAC                 AACCCTTGGATATGT  51 51
        thiC NONE
        thiE NONE
JN178_RS00600 NONE
        thiS NONE
JN178_RS00590 NONE
        thiH  128358 ..  128382 -  -4.4  -5.08601   GTATTTGAATAAAAA          CGCTATTT GTCCTTTCT AAATAGCG          TTACTACTGTTTCAA  75 88
JN178_RS00580  127078 ..  127105 -  -5.5  -5.66338   AAATATAATAAAAAA        GCCAGACGAAC ACACTG GTATGTCTGGC         TAAAATTTGCGCGGA  86 175
JN178_RS00575 NONE
JN178_RS00550  120044 ..  120069 - -14.9  -5.14477   TAGATATGGAAAAAA         TAAAACGCGAC ATTC GTCGCGTTTTA          TCTGCTTGATTAACT 100 39
JN178_RS00535  115845 ..  115869 - -14.3  -5.04601   CCTACAAACTAAAAA          GCCGCTTTCAC TGA GTGAATGCGGC          TTTGTTCTTATTATA 100 66
JN178_RS00525  113580 ..  113594 -  -7.2  -3.53012   GCGTTGGCGCGCAAA               GAAAAC CTT GTTTTC               GAATCACAACCCCTG  65 441
JN178_RS00490 NONE
JN178_RS00485  102308 ..  102322 -  -4.3  -3.17075   GGTTGTTCAAGCGAA               CATTC GGTAT GAATG               TGTCTACATGGCGTA  50 93
JN178_RS00475 NONE
JN178_RS00470   99023 ..   99038 -  -2.6  -3.41962   GTTGAAGAGATAACA              GC-CATA ATT TATGCGC              TCTTAACATGATGGT  47 18
JN178_RS00465 NONE
JN178_RS00460 NONE
JN178_RS00455 NONE
JN178_RS00450 NONE
JN178_RS00445 NONE
JN178_RS00440   90257 ..   90274 - -11.3  -3.51232   GTTTTTTTAAATTAA             GCGCTAC GAAT GTAGCGC              TTCTTTTTGGAAAAA  83 11
JN178_RS00435 NONE
JN178_RS00430   89141 ..   89162 -  -3.8  -2.88243   TTCATAACAAGATTA           CTTACCAA GTCCTT TTAGTAAG            CTCAGACTATCACCT  45 76
JN178_RS00425 NONE
JN178_RS00420   85775 ..   85785 -  -6.8   -3.9392   CCGCATTTCAAATAA                 GCCT TAA AGGC                 GGTATGCGTTTAGGT  68 329
JN178_RS00385   81673 ..   81684 -  -2.2  -3.51708   GAGCGGTTAAATTAA                CCGA TTAG TCGA                 GAAAACGCTACTTTT  46 69
JN178_RS00380   78781 ..   78799 -  -8.2   -2.6063   CCCAGCGAGAACTTA             TCTTTAGC CTT GCCAAAGA             GCGCCGCCAGTTTGG  59 251
JN178_RS00370   76555 ..   76569 - -11.4  -5.00616   TTTTTCCGCAAAAAA               GCGCCT TTT AGGCGC               TTTTATCATCCAAAA 100 48
        fliL   73498 ..   73513 - -10.4  -5.42259   CTAGGGTCAAAAAAA              GCGAGC TAAT GCTCGC               TTTTCTGCGTACTTC 100 66
JN178_RS00300 NONE
        coaD   62759 ..   62770 -  -4.4  -4.10161   CAGTATGCTTGAAAA                TCTG GGTC CAGA                 GCCTCTTACTGATGA  61 496
       coaBC NONE
        slmA   54069 ..   54112 -  -9.9  -2.94331   CCAAAAGCATAATGA GC-TA-CCATTAAAGCACCGCC TGT AGCGG-GCTTTAATGGCTATGC TAATGTGTTAAATAA  75 33
JN178_RS00230   51983 ..   52013 -  -7.7  -2.50479   GGCAAGTAAAATGAT      GAT-GAGCTAGCAG CGCA CTGCTAGCTCTATT       TTTCGATTAAAGTTT  61 32
JN178_RS00220   49760 ..   49790 -  -9.9  -3.61239   CATAGCGATACATAA      GGGTCT--CCGGTAA CCT TTACCGGCTAGACCC      GGCGGTTACTCTTTC  80 31
JN178_RS00215 NONE
JN178_RS00210   47272 ..   47287 -  -6.2  -3.69605   GGCACTCAAAATGAA              CTGTAT TTAT ATACAG               TATTATAGTGCAGCA  62 232
        imuA NONE
JN178_RS00200 NONE
JN178_RS00195 NONE
JN178_RS00190 NONE
JN178_RS00185   40229 ..   40249 -  -4.7  -2.77043   GCGAGTATTTTAAAT            TTCATAACG TAG CGCTTTGAA            GATTCTTAGTATATC  50 103
JN178_RS00180   39257 ..   39278 - -14.5  -4.14392   TCCCAATTCCGAAAA           GCCCTTGTC GTAA GACAAGGGC            TTTTTTTGTGCCTGT 100 126
JN178_RS00160   32700 ..   32712 -  -4.9  -2.64803   GTATCGCGAAACTGA                CTATT GCT AATAG                AACGCTAAGCCGTGC  49 482
JN178_RS00150   31604 ..   31617 -  -4.5  -3.81141   TTGTAGATAAAAAAT               GGCAC GTGA ATGCC                TCAGTACGTTTTATT  58 239
JN178_RS00110 NONE
         fmt NONE
        rsmB   22935 ..   22947 -  -6.3  -3.04398   GCCCGCGCCCAAAAT                GATGA TTT TCATC                GTTATTATTTTGCCT  56 86
        trkA   21063 ..   21073 -  -3.2   -2.5001   ACAAGCGGTATCAAT                 CAGT ACC ACCG                 CAGGCTTTGCTACAA  42 519
        polA   15917 ..   15935 - -12.4  -5.76633   TTAGACATAAAAAAA             CCCCGACA AAG CGTCGGGG             TTAAAGCAAAGGTTT 100 184
JN178_RS00070   13940 ..   13961 - -13.1   -5.8096   TATAAAAAAGAAAAA           GGTGATGGT TTTC ACCATCACC            TTACATTGTATGAGT 100 320
JN178_RS00065   13164 ..   13176 -  -7.7  -4.65666   AGAGTGAAAAAACAA                CGCTA TTA TAGCG                CGAATTCGCTTGCGC  83 70
        yihI NONE
JN178_RS00055   11911 ..   11927 -  -2.2  -4.72846   TTACAGACGGAAAAA              CCGTTG TAAAT CAATGG              AAAGATTTTAGGGAA  64 249
        glyQ NONE
        glyS    8347 ..    8365 -   -11  -5.75945   ATGGGGTAAAAAAAA             GCCCAACA CTT CGTTGGGC             TTTTAATTTAAGTGG 100 70
JN178_RS00035    7836 ..    7859 -  -9.6  -2.86601   TCTAGTAAAAACGTA          TGGTGGCCTA CTAT CAGACCACCA           AATATAATCAATGAA  72 45
