locus-tag class description AV939_RS00005 PF11638 DnaA N-terminal domain AV939_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AV939_RS00005 PF00308 Bacterial dnaA protein AV939_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AV939_RS00010 PF02767 DNA polymerase III beta subunit, central domain AV939_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AV939_RS00015 PF02463 RecF/RecN/SMC N terminal domain AV939_RS00020 PF18053 DNA gyrase B subunit insert domain AV939_RS00020 PF01751 Toprim domain AV939_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS00020 PF00204 DNA gyrase B AV939_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus AV939_RS00035 PF02092 Glycyl-tRNA synthetase beta subunit AV939_RS00035 PF05746 DALR anticodon binding domain AV939_RS00040 PF02091 Glycyl-tRNA synthetase alpha subunit AV939_RS00045 PF03352 Methyladenine glycosylase AV939_RS00055 PF04220 Der GTPase activator (YihI) AV939_RS00060 PF00034 Cytochrome c AV939_RS00065 PF01926 50S ribosome-binding GTPase AV939_RS00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AV939_RS00070 PF00476 DNA polymerase family A AV939_RS00070 PF01367 5'-3' exonuclease, C-terminal SAM fold AV939_RS00070 PF01612 3'-5' exonuclease AV939_RS00080 PF02386 Cation transport protein AV939_RS00085 PF02254 TrkA-N domain AV939_RS00085 PF02080 TrkA-C domain AV939_RS00090 PF01029 NusB family AV939_RS00090 PF01189 16S rRNA methyltransferase RsmB/F AV939_RS00095 PF00551 Formyl transferase AV939_RS00095 PF02911 Formyl transferase, C-terminal domain AV939_RS00100 PF01327 Polypeptide deformylase AV939_RS00110 PF02481 DNA recombination-mediator protein A AV939_RS00110 PF17782 DprA winged helix domain AV939_RS00115 PF04361 Protein of unknown function (DUF494) AV939_RS00125 PF01300 Telomere recombination AV939_RS00130 PF01218 Coproporphyrinogen III oxidase AV939_RS00135 PF03922 OmpW family AV939_RS00140 PF01152 Bacterial-like globin AV939_RS00145 PF08501 Shikimate dehydrogenase substrate binding domain AV939_RS00145 PF01488 Shikimate / quinate 5-dehydrogenase AV939_RS00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AV939_RS00150 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS00195 PF02811 PHP domain AV939_RS00195 PF14579 Helix-hairpin-helix motif AV939_RS00195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV939_RS00195 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV939_RS00195 PF01336 OB-fold nucleic acid binding domain AV939_RS00205 PF00154 recA bacterial DNA recombination protein AV939_RS00225 PF04389 Peptidase family M28 AV939_RS00225 PF02225 PA domain AV939_RS00235 PF00440 Bacterial regulatory proteins, tetR family AV939_RS00240 PF02441 Flavoprotein AV939_RS00240 PF04127 DNA / pantothenate metabolism flavoprotein AV939_RS00245 PF04002 RadC-like JAB domain AV939_RS00265 PF06082 Exopolysaccharide biosynthesis protein YbjH AV939_RS00270 PF01467 Cytidylyltransferase-like AV939_RS00275 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AV939_RS00280 PF00830 Ribosomal L28 family AV939_RS00285 PF00471 Ribosomal protein L33 AV939_RS00295 PF06827 Zinc finger found in FPG and IleRS AV939_RS00295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AV939_RS00295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AV939_RS00300 PF01467 Cytidylyltransferase-like AV939_RS00310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AV939_RS00325 PF00563 EAL domain AV939_RS00325 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS00325 PF03707 Bacterial signalling protein N terminal repeat AV939_RS00330 PF00155 Aminotransferase class I and II AV939_RS00335 PF00107 Zinc-binding dehydrogenase AV939_RS00335 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS00340 PF00581 Rhodanese-like domain AV939_RS00345 PF01694 Rhomboid family AV939_RS00345 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AV939_RS00355 PF04345 Chorismate lyase AV939_RS00360 PF01040 UbiA prenyltransferase family AV939_RS00365 PF04380 Membrane fusogenic activity AV939_RS00370 PF13361 UvrD-like helicase C-terminal domain AV939_RS00370 PF00580 UvrD/REP helicase N-terminal domain AV939_RS00375 PF03707 Bacterial signalling protein N terminal repeat AV939_RS00375 PF00563 EAL domain AV939_RS00375 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS00380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV939_RS00390 PF03553 Na+/H+ antiporter family AV939_RS00415 PF00266 Aminotransferase class-V AV939_RS00450 PF01580 FtsK/SpoIIIE family AV939_RS00450 PF09397 Ftsk gamma domain AV939_RS00450 PF17854 FtsK alpha domain AV939_RS00465 PF02652 L-lactate permease AV939_RS00475 PF01012 Electron transfer flavoprotein domain AV939_RS00475 PF00766 Electron transfer flavoprotein FAD-binding domain AV939_RS00480 PF13183 4Fe-4S dicluster domain AV939_RS00480 PF02754 Cysteine-rich domain AV939_RS00485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV939_RS00500 PF01965 DJ-1/PfpI family AV939_RS00500 PF12833 Helix-turn-helix domain AV939_RS00505 PF00355 Rieske [2Fe-2S] domain AV939_RS00505 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AV939_RS00515 PF00042 Globin AV939_RS00515 PF00175 Oxidoreductase NAD-binding domain AV939_RS00515 PF00970 Oxidoreductase FAD-binding domain AV939_RS00520 PF00464 Serine hydroxymethyltransferase AV939_RS00525 PF01266 FAD dependent oxidoreductase AV939_RS00530 PF04267 Sarcosine oxidase, delta subunit family AV939_RS00535 PF01571 Aminomethyltransferase folate-binding domain AV939_RS00535 PF08669 Glycine cleavage T-protein C-terminal barrel domain AV939_RS00535 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS00535 PF17806 Sarcosine oxidase A3 domain AV939_RS00545 PF00551 Formyl transferase AV939_RS00555 PF02028 BCCT, betaine/carnitine/choline family transporter AV939_RS00560 PF03315 Serine dehydratase beta chain AV939_RS00560 PF03313 Serine dehydratase alpha chain AV939_RS00565 PF03466 LysR substrate binding domain AV939_RS00565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS00580 PF00171 Aldehyde dehydrogenase family AV939_RS00585 PF13378 Enolase C-terminal domain-like AV939_RS00585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV939_RS00590 PF00732 GMC oxidoreductase AV939_RS00590 PF05199 GMC oxidoreductase AV939_RS00595 PF00171 Aldehyde dehydrogenase family AV939_RS00600 PF07715 TonB-dependent Receptor Plug Domain AV939_RS00600 PF00593 TonB dependent receptor AV939_RS00605 PF13181 Tetratricopeptide repeat AV939_RS00610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS00610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS00610 PF00072 Response regulator receiver domain AV939_RS00610 PF01627 Hpt domain AV939_RS00610 PF00672 HAMP domain AV939_RS00610 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS00615 PF00593 TonB dependent receptor AV939_RS00615 PF07715 TonB-dependent Receptor Plug Domain AV939_RS00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS00620 PF03466 LysR substrate binding domain AV939_RS00625 PF00171 Aldehyde dehydrogenase family AV939_RS00630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV939_RS00630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV939_RS00635 PF13533 Biotin-lipoyl like AV939_RS00640 PF00005 ABC transporter AV939_RS00655 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS00655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS00655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS00660 PF03466 LysR substrate binding domain AV939_RS00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS00665 PF00753 Metallo-beta-lactamase superfamily AV939_RS00670 PF02627 Carboxymuconolactone decarboxylase family AV939_RS00675 PF04317 YcjX-like family, DUF463 AV939_RS00695 PF04055 Radical SAM superfamily AV939_RS00695 PF06968 Biotin and Thiamin Synthesis associated domain AV939_RS00700 PF05690 Thiazole biosynthesis protein ThiG AV939_RS00710 PF00899 ThiF family AV939_RS00715 PF02581 Thiamine monophosphate synthase AV939_RS00720 PF01964 Radical SAM ThiC family AV939_RS00720 PF13667 ThiC-associated domain AV939_RS00725 PF00593 TonB dependent receptor AV939_RS00725 PF07715 TonB-dependent Receptor Plug Domain AV939_RS00730 PF00296 Luciferase-like monooxygenase AV939_RS00740 PF00881 Nitroreductase family AV939_RS00740 PF01996 F420-0:Gamma-glutamyl ligase AV939_RS00745 PF01983 Guanylyl transferase CofC like AV939_RS00750 PF01933 Uncharacterised protein family UPF0052 AV939_RS00755 PF04055 Radical SAM superfamily AV939_RS00760 PF04055 Radical SAM superfamily AV939_RS00765 PF08362 YcdC-like protein, C-terminal region AV939_RS00765 PF00440 Bacterial regulatory proteins, tetR family AV939_RS00770 PF03466 LysR substrate binding domain AV939_RS00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS00775 PF00202 Aminotransferase class-III AV939_RS00780 PF00171 Aldehyde dehydrogenase family AV939_RS00785 PF01546 Peptidase family M20/M25/M40 AV939_RS00785 PF07687 Peptidase dimerisation domain AV939_RS00790 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AV939_RS00795 PF01979 Amidohydrolase family AV939_RS00800 PF07719 Tetratricopeptide repeat AV939_RS00800 PF07219 HemY protein N-terminus AV939_RS00805 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AV939_RS00815 PF03900 Porphobilinogen deaminase, C-terminal domain AV939_RS00815 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AV939_RS00820 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS00820 PF00072 Response regulator receiver domain AV939_RS00830 PF00625 Guanylate kinase AV939_RS00835 PF01192 RNA polymerase Rpb6 AV939_RS00840 PF13291 ACT domain AV939_RS00840 PF02824 TGS domain AV939_RS00840 PF04607 Region found in RelA / SpoT proteins AV939_RS00845 PF01042 Endoribonuclease L-PSP AV939_RS00850 PF00588 SpoU rRNA Methylase family AV939_RS00850 PF12105 SpoU, rRNA methylase, C-terminal AV939_RS00855 PF00270 DEAD/DEAH box helicase AV939_RS00855 PF17191 RecG wedge domain AV939_RS00855 PF00271 Helicase conserved C-terminal domain AV939_RS00860 PF04445 Putative SAM-dependent methyltransferase AV939_RS00865 PF08534 Redoxin AV939_RS00865 PF00462 Glutaredoxin AV939_RS00885 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS00890 PF00005 ABC transporter AV939_RS00890 PF08402 TOBE domain AV939_RS00900 PF05552 Conserved TM helix AV939_RS00900 PF00924 Mechanosensitive ion channel AV939_RS00925 PF00563 EAL domain AV939_RS00925 PF05231 MASE1 AV939_RS00925 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS00925 PF08448 PAS fold AV939_RS00925 PF13426 PAS domain AV939_RS00925 PF08447 PAS fold AV939_RS00935 PF03466 LysR substrate binding domain AV939_RS00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS00940 PF01810 LysE type translocator AV939_RS00945 PF00893 Small Multidrug Resistance protein AV939_RS00960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS00960 PF00529 HlyD membrane-fusion protein of T1SS AV939_RS00965 PF00873 AcrB/AcrD/AcrF family AV939_RS00975 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AV939_RS00975 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AV939_RS00980 PF00850 Histone deacetylase domain AV939_RS00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS00990 PF00672 HAMP domain AV939_RS00990 PF12729 Four helix bundle sensory module for signal transduction AV939_RS00995 PF01544 CorA-like Mg2+ transporter protein AV939_RS01000 PF11737 Protein of unknown function (DUF3300) AV939_RS01005 PF00925 GTP cyclohydrolase II AV939_RS01010 PF08448 PAS fold AV939_RS01010 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS01010 PF00563 EAL domain AV939_RS01020 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AV939_RS01030 PF00271 Helicase conserved C-terminal domain AV939_RS01030 PF00270 DEAD/DEAH box helicase AV939_RS01030 PF00570 HRDC domain AV939_RS01030 PF16124 RecQ zinc-binding AV939_RS01030 PF09382 RQC domain AV939_RS01035 PF03061 Thioesterase superfamily AV939_RS01040 PF03448 MgtE intracellular N domain AV939_RS01040 PF00571 CBS domain AV939_RS01040 PF01769 Divalent cation transporter AV939_RS01045 PF00892 EamA-like transporter family AV939_RS01050 PF00072 Response regulator receiver domain AV939_RS01050 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS01055 PF00580 UvrD/REP helicase N-terminal domain AV939_RS01055 PF13361 UvrD-like helicase C-terminal domain AV939_RS01060 PF06426 Serine acetyltransferase, N-terminal AV939_RS01060 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS01065 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS01070 PF00589 Phage integrase family AV939_RS01070 PF02899 Phage integrase, N-terminal SAM-like domain AV939_RS01080 PF01678 Diaminopimelate epimerase AV939_RS01085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV939_RS01085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AV939_RS01100 PF01569 PAP2 superfamily AV939_RS01105 PF03737 Aldolase/RraA AV939_RS01115 PF02441 Flavoprotein AV939_RS01120 PF08245 Mur ligase middle domain AV939_RS01120 PF01225 Mur ligase family, catalytic domain AV939_RS01120 PF02875 Mur ligase family, glutamate ligase domain AV939_RS01125 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AV939_RS01130 PF00719 Inorganic pyrophosphatase AV939_RS01155 PF00005 ABC transporter AV939_RS01155 PF17755 UvrA DNA-binding domain AV939_RS01155 PF17760 UvrA interaction domain AV939_RS01160 PF07690 Major Facilitator Superfamily AV939_RS01165 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS01175 PF00356 Bacterial regulatory proteins, lacI family AV939_RS01185 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AV939_RS01185 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AV939_RS01190 PF10509 Galactokinase galactose-binding signature AV939_RS01190 PF08544 GHMP kinases C terminal AV939_RS01190 PF00288 GHMP kinases N terminal domain AV939_RS01195 PF00474 Sodium:solute symporter family AV939_RS01200 PF00436 Single-strand binding protein family AV939_RS01220 PF00975 Thioesterase domain AV939_RS01225 PF00873 AcrB/AcrD/AcrF family AV939_RS01240 PF00486 Transcriptional regulatory protein, C terminal AV939_RS01250 PF13193 AMP-binding enzyme C-terminal domain AV939_RS01250 PF00975 Thioesterase domain AV939_RS01250 PF00550 Phosphopantetheine attachment site AV939_RS01250 PF00668 Condensation domain AV939_RS01250 PF00501 AMP-binding enzyme AV939_RS01255 PF00668 Condensation domain AV939_RS01255 PF00550 Phosphopantetheine attachment site AV939_RS01255 PF00501 AMP-binding enzyme AV939_RS01255 PF13193 AMP-binding enzyme C-terminal domain AV939_RS01255 PF07993 Male sterility protein AV939_RS01260 PF13193 AMP-binding enzyme C-terminal domain AV939_RS01260 PF00668 Condensation domain AV939_RS01260 PF00550 Phosphopantetheine attachment site AV939_RS01260 PF00975 Thioesterase domain AV939_RS01260 PF00501 AMP-binding enzyme AV939_RS01265 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AV939_RS01270 PF00005 ABC transporter AV939_RS01285 PF00072 Response regulator receiver domain AV939_RS01285 PF00486 Transcriptional regulatory protein, C terminal AV939_RS01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS01290 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS01290 PF09456 RcsC Alpha-Beta-Loop (ABL) AV939_RS01290 PF00072 Response regulator receiver domain AV939_RS01295 PF00563 EAL domain AV939_RS01295 PF08668 HDOD domain AV939_RS01300 PF00701 Dihydrodipicolinate synthetase family AV939_RS01320 PF16874 Glycosyl hydrolase family 36 C-terminal domain AV939_RS01320 PF16875 Glycosyl hydrolase family 36 N-terminal domain AV939_RS01325 PF00474 Sodium:solute symporter family AV939_RS01335 PF04820 Tryptophan halogenase AV939_RS01345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AV939_RS01345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AV939_RS01350 PF08220 DeoR-like helix-turn-helix domain AV939_RS01350 PF00455 DeoR C terminal sensor domain AV939_RS01355 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AV939_RS01355 PF01266 FAD dependent oxidoreductase AV939_RS01385 PF03958 Bacterial type II/III secretion system short domain AV939_RS01385 PF00263 Bacterial type II and III secretion system protein AV939_RS01390 PF13401 AAA domain AV939_RS01390 PF01471 Putative peptidoglycan binding domain AV939_RS01400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AV939_RS01400 PF00437 Type II/IV secretion system protein AV939_RS01405 PF00482 Type II secretion system (T2SS), protein F AV939_RS01415 PF07963 Prokaryotic N-terminal methylation motif AV939_RS01420 PF07963 Prokaryotic N-terminal methylation motif AV939_RS01450 PF04085 rod shape-determining protein MreC AV939_RS01455 PF04093 rod shape-determining protein MreD AV939_RS01460 PF02545 Maf-like protein AV939_RS01465 PF00575 S1 RNA binding domain AV939_RS01465 PF10150 Ribonuclease E/G family AV939_RS01475 PF00795 Carbon-nitrogen hydrolase AV939_RS01480 PF01523 Putative modulator of DNA gyrase AV939_RS01490 PF04751 Protein of unknown function (DUF615) AV939_RS01495 PF01523 Putative modulator of DNA gyrase AV939_RS01505 PF02837 Glycosyl hydrolases family 2, sugar binding domain AV939_RS01505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AV939_RS01505 PF00703 Glycosyl hydrolases family 2 AV939_RS01505 PF16353 Domain of unknown function(DUF4981) AV939_RS01505 PF02929 Beta galactosidase small chain AV939_RS01510 PF00486 Transcriptional regulatory protein, C terminal AV939_RS01510 PF00072 Response regulator receiver domain AV939_RS01515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV939_RS01515 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS01520 PF00534 Glycosyl transferases group 1 AV939_RS01520 PF08323 Starch synthase catalytic domain AV939_RS01525 PF05175 Methyltransferase small domain AV939_RS01525 PF08468 Methyltransferase small domain N-terminal AV939_RS01530 PF02390 Putative methyltransferase AV939_RS01540 PF10576 Iron-sulfur binding domain of endonuclease III AV939_RS01540 PF00633 Helix-hairpin-helix motif AV939_RS01540 PF14815 NUDIX domain AV939_RS01540 PF00730 HhH-GPD superfamily base excision DNA repair protein AV939_RS01545 PF04362 Bacterial Fe(2+) trafficking AV939_RS01575 PF16750 Sensor domain of 2-component histidine kinase AV939_RS01575 PF00672 HAMP domain AV939_RS01575 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS01580 PF00486 Transcriptional regulatory protein, C terminal AV939_RS01580 PF00072 Response regulator receiver domain AV939_RS01590 PF17200 Single Cache domain 2 AV939_RS01590 PF00672 HAMP domain AV939_RS01590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS01595 PF00072 Response regulator receiver domain AV939_RS01600 PF02895 Signal transducing histidine kinase, homodimeric domain AV939_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS01600 PF01627 Hpt domain AV939_RS01600 PF09078 CheY binding AV939_RS01600 PF01584 CheW-like domain AV939_RS01605 PF01584 CheW-like domain AV939_RS01610 PF13426 PAS domain AV939_RS01610 PF08447 PAS fold AV939_RS01610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS01615 PF03705 CheR methyltransferase, all-alpha domain AV939_RS01615 PF01739 CheR methyltransferase, SAM binding domain AV939_RS01620 PF03975 CheD chemotactic sensory transduction AV939_RS01625 PF00072 Response regulator receiver domain AV939_RS01625 PF01339 CheB methylesterase AV939_RS01640 PF01435 Peptidase family M48 AV939_RS01655 PF00356 Bacterial regulatory proteins, lacI family AV939_RS01655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AV939_RS01665 PF01204 Trehalase AV939_RS01675 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS01680 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS01680 PF08448 PAS fold AV939_RS01680 PF13426 PAS domain AV939_RS01680 PF00072 Response regulator receiver domain AV939_RS01705 PF00356 Bacterial regulatory proteins, lacI family AV939_RS01710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV939_RS01710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV939_RS01720 PF03825 Nucleoside H+ symporter AV939_RS01730 PF05199 GMC oxidoreductase AV939_RS01730 PF00732 GMC oxidoreductase AV939_RS01770 PF00465 Iron-containing alcohol dehydrogenase AV939_RS01775 PF00300 Histidine phosphatase superfamily (branch 1) AV939_RS01780 PF00330 Aconitase family (aconitate hydratase) AV939_RS01780 PF00694 Aconitase C-terminal domain AV939_RS01790 PF00437 Type II/IV secretion system protein AV939_RS01790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AV939_RS01795 PF00338 Ribosomal protein S10p/S20e AV939_RS01800 PF00297 Ribosomal protein L3 AV939_RS01805 PF00573 Ribosomal protein L4/L1 family AV939_RS01810 PF00276 Ribosomal protein L23 AV939_RS01815 PF00181 Ribosomal Proteins L2, RNA binding domain AV939_RS01815 PF03947 Ribosomal Proteins L2, C-terminal domain AV939_RS01820 PF00203 Ribosomal protein S19 AV939_RS01825 PF00237 Ribosomal protein L22p/L17e AV939_RS01830 PF07650 KH domain AV939_RS01830 PF00189 Ribosomal protein S3, C-terminal domain AV939_RS01835 PF00252 Ribosomal protein L16p/L10e AV939_RS01840 PF00831 Ribosomal L29 protein AV939_RS01845 PF00366 Ribosomal protein S17 AV939_RS01850 PF00534 Glycosyl transferases group 1 AV939_RS01850 PF13439 Glycosyltransferase Family 4 AV939_RS01855 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AV939_RS01860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AV939_RS01860 PF00534 Glycosyl transferases group 1 AV939_RS01880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS01880 PF00672 HAMP domain AV939_RS01880 PF02743 Cache domain AV939_RS01885 PF01432 Peptidase family M3 AV939_RS01895 PF00551 Formyl transferase AV939_RS01895 PF01842 ACT domain AV939_RS01905 PF08482 ATP-dependent helicase C-terminal AV939_RS01905 PF00271 Helicase conserved C-terminal domain AV939_RS01905 PF00270 DEAD/DEAH box helicase AV939_RS01905 PF04408 Helicase associated domain (HA2) AV939_RS01910 PF13406 Transglycosylase SLT domain AV939_RS01920 PF00912 Transglycosylase AV939_RS01920 PF00905 Penicillin binding protein transpeptidase domain AV939_RS01920 PF14814 Bifunctional transglycosylase second domain AV939_RS01930 PF05661 Protein of unknown function (DUF808) AV939_RS01950 PF00543 Nitrogen regulatory protein P-II AV939_RS01955 PF00909 Ammonium Transporter Family AV939_RS01965 PF04261 Dyp-type peroxidase family AV939_RS01970 PF00672 HAMP domain AV939_RS01970 PF00211 Adenylate and Guanylate cyclase catalytic domain AV939_RS01975 PF00202 Aminotransferase class-III AV939_RS01980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV939_RS01980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV939_RS01985 PF00440 Bacterial regulatory proteins, tetR family AV939_RS01995 PF00873 AcrB/AcrD/AcrF family AV939_RS02005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS02005 PF00072 Response regulator receiver domain AV939_RS02005 PF01627 Hpt domain AV939_RS02005 PF00672 HAMP domain AV939_RS02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS02005 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS02010 PF03989 DNA gyrase C-terminal domain, beta-propeller AV939_RS02010 PF00521 DNA gyrase/topoisomerase IV, subunit A AV939_RS02020 PF00563 EAL domain AV939_RS02020 PF03707 Bacterial signalling protein N terminal repeat AV939_RS02020 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS02030 PF00171 Aldehyde dehydrogenase family AV939_RS02035 PF04958 Arginine N-succinyltransferase beta subunit AV939_RS02040 PF00202 Aminotransferase class-III AV939_RS02050 PF00117 Glutamine amidotransferase class-I AV939_RS02055 PF00579 tRNA synthetases class I (W and Y) AV939_RS02060 PF00834 Ribulose-phosphate 3 epimerase family AV939_RS02080 PF02086 D12 class N6 adenine-specific DNA methyltransferase AV939_RS02090 PF01761 3-dehydroquinate synthase AV939_RS02095 PF01202 Shikimate kinase AV939_RS02100 PF03958 Bacterial type II/III secretion system short domain AV939_RS02100 PF07660 Secretin and TonB N terminus short domain AV939_RS02100 PF11741 AMIN domain AV939_RS02100 PF00263 Bacterial type II and III secretion system protein AV939_RS02110 PF04350 Pilus assembly protein, PilO AV939_RS02115 PF05137 Fimbrial assembly protein (PilN) AV939_RS02120 PF11104 Type IV pilus assembly protein PilM; AV939_RS02125 PF00905 Penicillin binding protein transpeptidase domain AV939_RS02125 PF00912 Transglycosylase AV939_RS02125 PF17092 Penicillin-binding protein OB-like domain AV939_RS02130 PF03949 Malic enzyme, NAD binding domain AV939_RS02130 PF00390 Malic enzyme, N-terminal domain AV939_RS02135 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS02170 PF00563 EAL domain AV939_RS02170 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS02170 PF03707 Bacterial signalling protein N terminal repeat AV939_RS02175 PF00583 Acetyltransferase (GNAT) family AV939_RS02175 PF00696 Amino acid kinase family AV939_RS02180 PF00206 Lyase AV939_RS02180 PF14698 Argininosuccinate lyase C-terminal AV939_RS02185 PF00764 Arginosuccinate synthase AV939_RS02190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV939_RS02190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV939_RS02195 PF00696 Amino acid kinase family AV939_RS02200 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV939_RS02200 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV939_RS02205 PF02142 MGS-like domain AV939_RS02215 PF02107 Flagellar L-ring protein AV939_RS02230 PF00486 Transcriptional regulatory protein, C terminal AV939_RS02230 PF00072 Response regulator receiver domain AV939_RS02235 PF00672 HAMP domain AV939_RS02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS02235 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS02235 PF16527 Two-component sensor protein CpxA, periplasmic domain AV939_RS02240 PF12146 Serine aminopeptidase, S33 AV939_RS02245 PF00588 SpoU rRNA Methylase family AV939_RS02250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AV939_RS02250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AV939_RS02255 PF02556 Preprotein translocase subunit SecB AV939_RS02260 PF00462 Glutaredoxin AV939_RS02270 PF01551 Peptidase family M23 AV939_RS02280 PF04748 Divergent polysaccharide deacetylase AV939_RS02290 PF03009 Glycerophosphoryl diester phosphodiesterase family AV939_RS02300 PF02666 Phosphatidylserine decarboxylase AV939_RS02305 PF03193 RsgA GTPase AV939_RS02310 PF00929 Exonuclease AV939_RS02325 PF07715 TonB-dependent Receptor Plug Domain AV939_RS02325 PF00593 TonB dependent receptor AV939_RS02330 PF13181 Tetratricopeptide repeat AV939_RS02345 PF00205 Thiamine pyrophosphate enzyme, central domain AV939_RS02345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV939_RS02345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV939_RS02350 PF10369 Small subunit of acetolactate synthase AV939_RS02360 PF02416 mttA/Hcf106 family AV939_RS02365 PF02416 mttA/Hcf106 family AV939_RS02370 PF00902 Sec-independent protein translocase protein (TatC) AV939_RS02380 PF01026 TatD related DNase AV939_RS02385 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS02390 PF00490 Delta-aminolevulinic acid dehydratase AV939_RS02395 PF02541 Ppx/GppA phosphatase family AV939_RS02400 PF00271 Helicase conserved C-terminal domain AV939_RS02400 PF00270 DEAD/DEAH box helicase AV939_RS02405 PF00085 Thioredoxin AV939_RS02410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV939_RS02410 PF07497 Rho termination factor, RNA-binding domain AV939_RS02410 PF07498 Rho termination factor, N-terminal domain AV939_RS02415 PF07687 Peptidase dimerisation domain AV939_RS02415 PF01546 Peptidase family M20/M25/M40 AV939_RS02420 PF00072 Response regulator receiver domain AV939_RS02420 PF09308 LuxQ, periplasmic AV939_RS02420 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS02425 PF06965 Na+/H+ antiporter 1 AV939_RS02430 PF00731 AIR carboxylase AV939_RS02435 PF02222 ATP-grasp domain AV939_RS02435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AV939_RS02450 PF00210 Ferritin-like domain AV939_RS02455 PF07995 Glucose / Sorbosone dehydrogenase AV939_RS02465 PF00085 Thioredoxin AV939_RS02475 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AV939_RS02480 PF00709 Adenylosuccinate synthetase AV939_RS02485 PF00171 Aldehyde dehydrogenase family AV939_RS02505 PF03553 Na+/H+ antiporter family AV939_RS02510 PF00933 Glycosyl hydrolase family 3 N terminal domain AV939_RS02525 PF07075 Protein of unknown function (DUF1343) AV939_RS02530 PF01380 SIS domain AV939_RS02535 PF00842 Alanine racemase, C-terminal domain AV939_RS02535 PF01168 Alanine racemase, N-terminal domain AV939_RS02550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV939_RS02565 PF00672 HAMP domain AV939_RS02565 PF12729 Four helix bundle sensory module for signal transduction AV939_RS02565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS02585 PF00583 Acetyltransferase (GNAT) family AV939_RS02595 PF03358 NADPH-dependent FMN reductase AV939_RS02625 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AV939_RS02630 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AV939_RS02730 PF00550 Phosphopantetheine attachment site AV939_RS02735 PF00023 Ankyrin repeat AV939_RS02805 PF00561 alpha/beta hydrolase fold AV939_RS02810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS02810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS02810 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV939_RS02810 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS02815 PF02803 Thiolase, C-terminal domain AV939_RS02815 PF00108 Thiolase, N-terminal domain AV939_RS02820 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS02820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV939_RS02820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV939_RS02825 PF00561 alpha/beta hydrolase fold AV939_RS02845 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS02845 PF00107 Zinc-binding dehydrogenase AV939_RS02855 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS02855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS02855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS02865 PF00593 TonB dependent receptor AV939_RS02865 PF07715 TonB-dependent Receptor Plug Domain AV939_RS02885 PF06969 HemN C-terminal domain AV939_RS02885 PF04055 Radical SAM superfamily AV939_RS02890 PF03459 TOBE domain AV939_RS02890 PF00005 ABC transporter AV939_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS02905 PF02391 MoaE protein AV939_RS02910 PF02597 ThiS family AV939_RS02915 PF01967 MoaC family AV939_RS02920 PF00994 Probable molybdopterin binding domain AV939_RS02925 PF00899 ThiF family AV939_RS02985 PF00589 Phage integrase family AV939_RS02985 PF13495 Phage integrase, N-terminal SAM-like domain AV939_RS02990 PF02803 Thiolase, C-terminal domain AV939_RS02990 PF00108 Thiolase, N-terminal domain AV939_RS02995 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV939_RS02995 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS02995 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV939_RS03000 PF01464 Transglycosylase SLT domain AV939_RS03000 PF14718 Soluble lytic murein transglycosylase L domain AV939_RS03005 PF00557 Metallopeptidase family M24 AV939_RS03015 PF00348 Polyprenyl synthetase AV939_RS03020 PF00829 Ribosomal prokaryotic L21 protein AV939_RS03025 PF01016 Ribosomal L27 protein AV939_RS03030 PF01926 50S ribosome-binding GTPase AV939_RS03030 PF01018 GTP1/OBG AV939_RS03040 PF09055 Nickel-containing superoxide dismutase AV939_RS03060 PF00186 Dihydrofolate reductase AV939_RS03065 PF04542 Sigma-70 region 2 AV939_RS03065 PF00140 Sigma-70 factor, region 1.2 AV939_RS03065 PF04545 Sigma-70, region 4 AV939_RS03065 PF04539 Sigma-70 region 3 AV939_RS03070 PF01476 LysM domain AV939_RS03070 PF01551 Peptidase family M23 AV939_RS03075 PF09335 SNARE associated Golgi protein AV939_RS03085 PF01975 Survival protein SurE AV939_RS03090 PF01142 tRNA pseudouridine synthase D (TruD) AV939_RS03095 PF02542 YgbB family AV939_RS03100 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AV939_RS03105 PF04977 Septum formation initiator AV939_RS03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS03115 PF00672 HAMP domain AV939_RS03115 PF17200 Single Cache domain 2 AV939_RS03120 PF00171 Aldehyde dehydrogenase family AV939_RS03120 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AV939_RS03120 PF01619 Proline dehydrogenase AV939_RS03120 PF14850 DNA-binding domain of Proline dehydrogenase AV939_RS03125 PF02321 Outer membrane efflux protein AV939_RS03130 PF13533 Biotin-lipoyl like AV939_RS03135 PF00873 AcrB/AcrD/AcrF family AV939_RS03140 PF00072 Response regulator receiver domain AV939_RS03140 PF00486 Transcriptional regulatory protein, C terminal AV939_RS03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03145 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS03150 PF08239 Bacterial SH3 domain AV939_RS03155 PF01928 CYTH domain AV939_RS03165 PF02976 DNA mismatch repair enzyme MutH AV939_RS03170 PF00293 NUDIX domain AV939_RS03175 PF05524 PEP-utilising enzyme, N-terminal AV939_RS03175 PF02896 PEP-utilising enzyme, TIM barrel domain AV939_RS03175 PF00391 PEP-utilising enzyme, mobile domain AV939_RS03175 PF01590 GAF domain AV939_RS03180 PF01925 Sulfite exporter TauE/SafE AV939_RS03185 PF01790 Prolipoprotein diacylglyceryl transferase AV939_RS03190 PF00303 Thymidylate synthase AV939_RS03195 PF00072 Response regulator receiver domain AV939_RS03195 PF01339 CheB methylesterase AV939_RS03200 PF05230 MASE2 domain AV939_RS03200 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03205 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS03205 PF09308 LuxQ, periplasmic AV939_RS03205 PF00072 Response regulator receiver domain AV939_RS03210 PF07690 Major Facilitator Superfamily AV939_RS03225 PF00849 RNA pseudouridylate synthase AV939_RS03230 PF18339 RapA N-terminal Tudor like domain 1 AV939_RS03230 PF00176 SNF2 family N-terminal domain AV939_RS03230 PF12137 RNA polymerase recycling family C-terminal AV939_RS03230 PF00271 Helicase conserved C-terminal domain AV939_RS03230 PF18337 RapA N-terminal Tudor like domain AV939_RS03235 PF13638 PIN domain AV939_RS03235 PF02562 PhoH-like protein AV939_RS03245 PF00392 Bacterial regulatory proteins, gntR family AV939_RS03245 PF07729 FCD domain AV939_RS03250 PF16347 Domain of unknown function (DUF4976) AV939_RS03250 PF00884 Sulfatase AV939_RS03255 PF00171 Aldehyde dehydrogenase family AV939_RS03265 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS03265 PF00107 Zinc-binding dehydrogenase AV939_RS03270 PF13378 Enolase C-terminal domain-like AV939_RS03270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV939_RS03275 PF00083 Sugar (and other) transporter AV939_RS03280 PF00294 pfkB family carbohydrate kinase AV939_RS03295 PF00067 Cytochrome P450 AV939_RS03300 PF00111 2Fe-2S iron-sulfur cluster binding domain AV939_RS03305 PF14759 Reductase C-terminal AV939_RS03305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS03340 PF17992 Agarase CBM like domain AV939_RS03340 PF02449 Beta-galactosidase AV939_RS03350 PF00722 Glycosyl hydrolases family 16 AV939_RS03360 PF17992 Agarase CBM like domain AV939_RS03360 PF02449 Beta-galactosidase AV939_RS03365 PF00884 Sulfatase AV939_RS03370 PF00722 Glycosyl hydrolases family 16 AV939_RS03375 PF04820 Tryptophan halogenase AV939_RS03395 PF00884 Sulfatase AV939_RS03395 PF16385 Domain of unknown function AV939_RS03400 PF07715 TonB-dependent Receptor Plug Domain AV939_RS03400 PF00593 TonB dependent receptor AV939_RS03425 PF18206 Porphyranase catalytic subdomain 1 AV939_RS03430 PF00884 Sulfatase AV939_RS03430 PF16347 Domain of unknown function (DUF4976) AV939_RS03435 PF00884 Sulfatase AV939_RS03445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV939_RS03445 PF10414 Sirohaem synthase dimerisation region AV939_RS03450 PF00271 Helicase conserved C-terminal domain AV939_RS03450 PF12343 Cold shock protein DEAD box A AV939_RS03450 PF00270 DEAD/DEAH box helicase AV939_RS03450 PF03880 DbpA RNA binding domain AV939_RS03465 PF02321 Outer membrane efflux protein AV939_RS03470 PF00293 NUDIX domain AV939_RS03485 PF05728 Uncharacterised protein family (UPF0227) AV939_RS03490 PF00204 DNA gyrase B AV939_RS03490 PF00986 DNA gyrase B subunit, carboxyl terminus AV939_RS03490 PF01751 Toprim domain AV939_RS03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03495 PF00563 EAL domain AV939_RS03495 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS03495 PF03707 Bacterial signalling protein N terminal repeat AV939_RS03500 PF01590 GAF domain AV939_RS03500 PF00360 Phytochrome region AV939_RS03500 PF08446 PAS fold AV939_RS03500 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03505 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS03525 PF04055 Radical SAM superfamily AV939_RS03530 PF01132 Elongation factor P (EF-P) OB domain AV939_RS03530 PF08207 Elongation factor P (EF-P) KOW-like domain AV939_RS03530 PF09285 Elongation factor P, C-terminal AV939_RS03535 PF00152 tRNA synthetases class II (D, K and N) AV939_RS03540 PF00593 TonB dependent receptor AV939_RS03540 PF07715 TonB-dependent Receptor Plug Domain AV939_RS03555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV939_RS03560 PF05175 Methyltransferase small domain AV939_RS03570 PF01722 BolA-like protein AV939_RS03575 PF01569 PAP2 superfamily AV939_RS03585 PF03861 ANTAR domain AV939_RS03585 PF08376 Nitrate and nitrite sensing AV939_RS03595 PF00916 Sulfate permease family AV939_RS03595 PF01740 STAS domain AV939_RS03600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS03600 PF04324 BFD-like [2Fe-2S] binding domain AV939_RS03600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV939_RS03600 PF18267 Rubredoxin NAD+ reductase C-terminal domain AV939_RS03600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV939_RS03605 PF13806 Rieske-like [2Fe-2S] domain AV939_RS03610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AV939_RS03610 PF04324 BFD-like [2Fe-2S] binding domain AV939_RS03610 PF00384 Molybdopterin oxidoreductase AV939_RS03610 PF01568 Molydopterin dinucleotide binding domain AV939_RS03615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV939_RS03615 PF14824 Sirohaem biosynthesis protein central AV939_RS03615 PF10414 Sirohaem synthase dimerisation region AV939_RS03620 PF02885 Glycosyl transferase family, helical bundle domain AV939_RS03620 PF00591 Glycosyl transferase family, a/b domain AV939_RS03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS03625 PF08447 PAS fold AV939_RS03625 PF13426 PAS domain AV939_RS03630 PF00005 ABC transporter AV939_RS03635 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS03640 PF00005 ABC transporter AV939_RS03655 PF01323 DSBA-like thioredoxin domain AV939_RS03660 PF00593 TonB dependent receptor AV939_RS03660 PF07715 TonB-dependent Receptor Plug Domain AV939_RS03665 PF01636 Phosphotransferase enzyme family AV939_RS03670 PF12801 4Fe-4S binding domain AV939_RS03670 PF13746 4Fe-4S dicluster domain AV939_RS03670 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AV939_RS03685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS03685 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV939_RS03685 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS03685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS03710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV939_RS03710 PF13378 Enolase C-terminal domain-like AV939_RS03715 PF00596 Class II Aldolase and Adducin N-terminal domain AV939_RS03720 PF00293 NUDIX domain AV939_RS03725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS03730 PF00873 AcrB/AcrD/AcrF family AV939_RS03745 PF00672 HAMP domain AV939_RS03745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS03745 PF02743 Cache domain AV939_RS03750 PF04539 Sigma-70 region 3 AV939_RS03750 PF04545 Sigma-70, region 4 AV939_RS03750 PF04542 Sigma-70 region 2 AV939_RS03750 PF00140 Sigma-70 factor, region 1.2 AV939_RS03750 PF03979 Sigma-70 factor, region 1.1 AV939_RS03750 PF04546 Sigma-70, non-essential region AV939_RS03755 PF08278 DNA primase DnaG DnaB-binding AV939_RS03755 PF10410 DnaB-helicase binding domain of primase AV939_RS03755 PF01807 CHC2 zinc finger AV939_RS03755 PF08275 DNA primase catalytic core, N-terminal domain AV939_RS03760 PF09424 Yqey-like protein AV939_RS03765 PF01165 Ribosomal protein S21 AV939_RS03770 PF00814 Glycoprotease family AV939_RS03780 PF02660 Glycerol-3-phosphate acyltransferase AV939_RS03785 PF02152 Dihydroneopterin aldolase AV939_RS03795 PF02673 Bacitracin resistance protein BacA AV939_RS03800 PF01230 HIT domain AV939_RS03815 PF03594 Benzoate membrane transport protein AV939_RS03820 PF01381 Helix-turn-helix AV939_RS03820 PF07883 Cupin domain AV939_RS03825 PF04381 Putative exonuclease, RdgC AV939_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03830 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS03830 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV939_RS03835 PF00072 Response regulator receiver domain AV939_RS03835 PF00486 Transcriptional regulatory protein, C terminal AV939_RS03840 PF11808 Phosphate regulon sensor protein PhoR AV939_RS03840 PF00989 PAS fold AV939_RS03840 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03845 PF12849 PBP superfamily domain AV939_RS03870 PF01618 MotA/TolQ/ExbB proton channel family AV939_RS03875 PF01618 MotA/TolQ/ExbB proton channel family AV939_RS03880 PF02472 Biopolymer transport protein ExbD/TolR AV939_RS03885 PF03544 Gram-negative bacterial TonB protein C-terminal AV939_RS03895 PF09411 Lipid A 3-O-deacylase (PagL) AV939_RS03900 PF00072 Response regulator receiver domain AV939_RS03905 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS03905 PF00072 Response regulator receiver domain AV939_RS03905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS03905 PF01627 Hpt domain AV939_RS03905 PF00672 HAMP domain AV939_RS03910 PF13193 AMP-binding enzyme C-terminal domain AV939_RS03910 PF00501 AMP-binding enzyme AV939_RS03920 PF07995 Glucose / Sorbosone dehydrogenase AV939_RS03925 PF11791 Aconitate B N-terminal domain AV939_RS03925 PF00330 Aconitase family (aconitate hydratase) AV939_RS03925 PF06434 Aconitate hydratase 2 N-terminus AV939_RS03935 PF00330 Aconitase family (aconitate hydratase) AV939_RS03935 PF06434 Aconitate hydratase 2 N-terminus AV939_RS03935 PF11791 Aconitate B N-terminal domain AV939_RS03945 PF01842 ACT domain AV939_RS03945 PF00696 Amino acid kinase family AV939_RS03950 PF00672 HAMP domain AV939_RS03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS03955 PF00149 Calcineurin-like phosphoesterase AV939_RS03960 PF04379 ApaG domain AV939_RS03965 PF00398 Ribosomal RNA adenine dimethylase AV939_RS03970 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AV939_RS03975 PF00639 PPIC-type PPIASE domain AV939_RS03975 PF09312 SurA N-terminal domain AV939_RS03980 PF03968 OstA-like protein AV939_RS03980 PF04453 LPS transport system D AV939_RS03985 PF05099 Tellurite resistance protein TerB AV939_RS03985 PF00226 DnaJ domain AV939_RS03990 PF00589 Phage integrase family AV939_RS03990 PF02899 Phage integrase, N-terminal SAM-like domain AV939_RS03995 PF13098 Thioredoxin-like domain AV939_RS03995 PF10411 Disulfide bond isomerase protein N-terminus AV939_RS04000 PF17768 RecJ OB domain AV939_RS04000 PF02272 DHHA1 domain AV939_RS04000 PF01368 DHH family AV939_RS04010 PF11967 Recombination protein O N terminal AV939_RS04010 PF02565 Recombination protein O C terminal AV939_RS04015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AV939_RS04020 PF01648 4'-phosphopantetheinyl transferase superfamily AV939_RS04025 PF05958 tRNA (Uracil-5-)-methyltransferase AV939_RS04030 PF13291 ACT domain AV939_RS04030 PF04607 Region found in RelA / SpoT proteins AV939_RS04030 PF02824 TGS domain AV939_RS04035 PF03819 MazG nucleotide pyrophosphohydrolase domain AV939_RS04050 PF00572 Ribosomal protein L13 AV939_RS04055 PF00380 Ribosomal protein S9/S16 AV939_RS04060 PF08281 Sigma-70, region 4 AV939_RS04060 PF04542 Sigma-70 region 2 AV939_RS04070 PF00593 TonB dependent receptor AV939_RS04070 PF07715 TonB-dependent Receptor Plug Domain AV939_RS04080 PF01546 Peptidase family M20/M25/M40 AV939_RS04085 PF00355 Rieske [2Fe-2S] domain AV939_RS04085 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AV939_RS04090 PF00032 Cytochrome b(C-terminal)/b6/petD AV939_RS04090 PF00033 Cytochrome b/b6/petB AV939_RS04095 PF02167 Cytochrome C1 family AV939_RS04100 PF00043 Glutathione S-transferase, C-terminal domain AV939_RS04100 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS04105 PF04386 Stringent starvation protein B AV939_RS04110 PF08264 Anticodon-binding domain of tRNA AV939_RS04110 PF09334 tRNA synthetases class I (M) AV939_RS04110 PF01588 Putative tRNA binding domain AV939_RS04115 PF12833 Helix-turn-helix domain AV939_RS04125 PF00571 CBS domain AV939_RS04125 PF01769 Divalent cation transporter AV939_RS04125 PF03448 MgtE intracellular N domain AV939_RS04130 PF00381 PTS HPr component phosphorylation site AV939_RS04135 PF03668 P-loop ATPase protein family AV939_RS04140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AV939_RS04145 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AV939_RS04150 PF04963 Sigma-54 factor, core binding domain AV939_RS04150 PF00309 Sigma-54 factor, Activator interacting domain (AID) AV939_RS04150 PF04552 Sigma-54, DNA binding domain AV939_RS04155 PF00005 ABC transporter AV939_RS04155 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV939_RS04175 PF00571 CBS domain AV939_RS04175 PF01380 SIS domain AV939_RS04180 PF01699 Sodium/calcium exchanger protein AV939_RS04185 PF00005 ABC transporter AV939_RS04190 PF02405 Permease MlaE AV939_RS04195 PF02470 MlaD protein AV939_RS04200 PF05494 MlaC protein AV939_RS04210 PF01722 BolA-like protein AV939_RS04215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV939_RS04220 PF13180 PDZ domain AV939_RS04225 PF00595 PDZ domain AV939_RS04225 PF13180 PDZ domain AV939_RS04235 PF03969 AFG1-like ATPase AV939_RS04240 PF01709 Transcriptional regulator AV939_RS04250 PF12833 Helix-turn-helix domain AV939_RS04265 PF02355 Protein export membrane protein AV939_RS04265 PF07549 SecD/SecF GG Motif AV939_RS04270 PF03471 Transporter associated domain AV939_RS04270 PF02080 TrkA-C domain AV939_RS04270 PF00999 Sodium/hydrogen exchanger family AV939_RS04280 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS04280 PF00563 EAL domain AV939_RS04280 PF13188 PAS domain AV939_RS04280 PF03707 Bacterial signalling protein N terminal repeat AV939_RS04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS04285 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS04285 PF09308 LuxQ, periplasmic AV939_RS04285 PF00072 Response regulator receiver domain AV939_RS04290 PF13458 Periplasmic binding protein AV939_RS04295 PF06719 AraC-type transcriptional regulator N-terminus AV939_RS04295 PF12833 Helix-turn-helix domain AV939_RS04300 PF00465 Iron-containing alcohol dehydrogenase AV939_RS04320 PF02773 S-adenosylmethionine synthetase, C-terminal domain AV939_RS04320 PF02772 S-adenosylmethionine synthetase, central domain AV939_RS04320 PF00438 S-adenosylmethionine synthetase, N-terminal domain AV939_RS04325 PF02779 Transketolase, pyrimidine binding domain AV939_RS04325 PF00456 Transketolase, thiamine diphosphate binding domain AV939_RS04325 PF02780 Transketolase, C-terminal domain AV939_RS04330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV939_RS04330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV939_RS04335 PF00162 Phosphoglycerate kinase AV939_RS04340 PF00274 Fructose-bisphosphate aldolase class-I AV939_RS04345 PF07676 WD40-like Beta Propeller Repeat AV939_RS04345 PF00326 Prolyl oligopeptidase family AV939_RS04350 PF02541 Ppx/GppA phosphatase family AV939_RS04355 PF17941 Polyphosphate kinase C-terminal domain 1 AV939_RS04355 PF02503 Polyphosphate kinase middle domain AV939_RS04355 PF13090 Polyphosphate kinase C-terminal domain 2 AV939_RS04355 PF13089 Polyphosphate kinase N-terminal domain AV939_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS04370 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS04375 PF00005 ABC transporter AV939_RS04380 PF01895 PhoU domain AV939_RS04385 PF01384 Phosphate transporter family AV939_RS04395 PF03466 LysR substrate binding domain AV939_RS04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS04400 PF04542 Sigma-70 region 2 AV939_RS04400 PF08281 Sigma-70, region 4 AV939_RS04400 PF12680 SnoaL-like domain AV939_RS04420 PF03006 Haemolysin-III related AV939_RS04425 PF03707 Bacterial signalling protein N terminal repeat AV939_RS04425 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS04425 PF00563 EAL domain AV939_RS04440 PF00083 Sugar (and other) transporter AV939_RS04445 PF12833 Helix-turn-helix domain AV939_RS04450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AV939_RS04450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AV939_RS04460 PF02013 Cellulose or protein binding domain AV939_RS04460 PF02927 Cellulase N-terminal ig-like domain AV939_RS04460 PF00759 Glycosyl hydrolase family 9 AV939_RS04460 PF00801 PKD domain AV939_RS04460 PF00553 Cellulose binding domain AV939_RS04465 PF12833 Helix-turn-helix domain AV939_RS04470 PF04820 Tryptophan halogenase AV939_RS04480 PF14310 Fibronectin type III-like domain AV939_RS04480 PF00933 Glycosyl hydrolase family 3 N terminal domain AV939_RS04480 PF01915 Glycosyl hydrolase family 3 C-terminal domain AV939_RS04480 PF07691 PA14 domain AV939_RS04485 PF01047 MarR family AV939_RS04490 PF02566 OsmC-like protein AV939_RS04495 PF01433 Peptidase family M1 domain AV939_RS04505 PF09186 Domain of unknown function (DUF1949) AV939_RS04505 PF01205 Uncharacterized protein family UPF0029 AV939_RS04510 PF08447 PAS fold AV939_RS04510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS04510 PF13426 PAS domain AV939_RS04515 PF00149 Calcineurin-like phosphoesterase AV939_RS04515 PF12320 Type 5 capsule protein repressor C-terminal domain AV939_RS04520 PF13476 AAA domain AV939_RS04525 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS04525 PF05230 MASE2 domain AV939_RS04535 PF01869 BadF/BadG/BcrA/BcrD ATPase family AV939_RS04540 PF01979 Amidohydrolase family AV939_RS04545 PF11856 Protein of unknown function (DUF3376) AV939_RS04545 PF01734 Patatin-like phospholipase AV939_RS04550 PF00005 ABC transporter AV939_RS04550 PF12848 ABC transporter AV939_RS04570 PF07715 TonB-dependent Receptor Plug Domain AV939_RS04570 PF00593 TonB dependent receptor AV939_RS04585 PF01734 Patatin-like phospholipase AV939_RS04610 PF00593 TonB dependent receptor AV939_RS04615 PF03466 LysR substrate binding domain AV939_RS04615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS04655 PF04172 LrgB-like family AV939_RS04660 PF00072 Response regulator receiver domain AV939_RS04685 PF06969 HemN C-terminal domain AV939_RS04685 PF04055 Radical SAM superfamily AV939_RS04690 PF01725 Ham1 family AV939_RS04695 PF00271 Helicase conserved C-terminal domain AV939_RS04695 PF00270 DEAD/DEAH box helicase AV939_RS04700 PF12627 Probable RNA and SrmB- binding site of polymerase A AV939_RS04700 PF01743 Poly A polymerase head domain AV939_RS04705 PF01471 Putative peptidoglycan binding domain AV939_RS04705 PF13401 AAA domain AV939_RS04715 PF11849 Domain of unknown function (DUF3369) AV939_RS04720 PF00694 Aconitase C-terminal domain AV939_RS04725 PF00330 Aconitase family (aconitate hydratase) AV939_RS04730 PF00180 Isocitrate/isopropylmalate dehydrogenase AV939_RS04735 PF08502 LeuA allosteric (dimerisation) domain AV939_RS04735 PF00682 HMGL-like AV939_RS04740 PF00561 alpha/beta hydrolase fold AV939_RS04755 PF03952 Enolase, N-terminal domain AV939_RS04755 PF00113 Enolase, C-terminal TIM barrel domain AV939_RS04760 PF00117 Glutamine amidotransferase class-I AV939_RS04760 PF06418 CTP synthase N-terminus AV939_RS04765 PF05192 MutS domain III AV939_RS04765 PF05190 MutS family domain IV AV939_RS04765 PF05188 MutS domain II AV939_RS04765 PF01624 MutS domain I AV939_RS04765 PF00488 MutS domain V AV939_RS04770 PF02464 Competence-damaged protein AV939_RS04775 PF00154 recA bacterial DNA recombination protein AV939_RS04780 PF00005 ABC transporter AV939_RS04785 PF12679 ABC-2 family transporter protein AV939_RS04805 PF00005 ABC transporter AV939_RS04810 PF03379 CcmB protein AV939_RS04815 PF01578 Cytochrome C assembly protein AV939_RS04820 PF04995 Heme exporter protein D (CcmD) AV939_RS04825 PF03100 CcmE AV939_RS04830 PF01578 Cytochrome C assembly protein AV939_RS04830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AV939_RS04835 PF08534 Redoxin AV939_RS04840 PF03918 Cytochrome C biogenesis protein AV939_RS04850 PF04333 MlaA lipoprotein AV939_RS04855 PF16363 GDP-mannose 4,6 dehydratase AV939_RS04865 PF00854 POT family AV939_RS04875 PF00005 ABC transporter AV939_RS04880 PF01061 ABC-2 type transporter AV939_RS04885 PF02563 Polysaccharide biosynthesis/export protein AV939_RS04885 PF10531 SLBB domain AV939_RS04895 PF00953 Glycosyl transferase family 4 AV939_RS04900 PF00535 Glycosyl transferase family 2 AV939_RS04910 PF00483 Nucleotidyl transferase AV939_RS04915 PF10531 SLBB domain AV939_RS04920 PF00180 Isocitrate/isopropylmalate dehydrogenase AV939_RS04920 PF18324 Hypothetical protein TT1725 AV939_RS04935 PF11892 Domain of unknown function (DUF3412) AV939_RS04935 PF03641 Possible lysine decarboxylase AV939_RS04935 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AV939_RS04940 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS04945 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AV939_RS04945 PF14489 QueF-like protein AV939_RS04950 PF07348 Syd protein (SUKH-2) AV939_RS04975 PF00817 impB/mucB/samB family AV939_RS04975 PF11799 impB/mucB/samB family C-terminal domain AV939_RS04975 PF13438 Domain of unknown function (DUF4113) AV939_RS04980 PF00717 Peptidase S24-like AV939_RS05015 PF00849 RNA pseudouridylate synthase AV939_RS05020 PF00258 Flavodoxin AV939_RS05025 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS05025 PF14602 Hexapeptide repeat of succinyl-transferase AV939_RS05025 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AV939_RS05030 PF01842 ACT domain AV939_RS05030 PF08335 GlnD PII-uridylyltransferase AV939_RS05030 PF01966 HD domain AV939_RS05030 PF01909 Nucleotidyltransferase domain AV939_RS05035 PF00557 Metallopeptidase family M24 AV939_RS05040 PF00318 Ribosomal protein S2 AV939_RS05045 PF00889 Elongation factor TS AV939_RS05050 PF00696 Amino acid kinase family AV939_RS05055 PF01765 Ribosome recycling factor AV939_RS05060 PF01255 Putative undecaprenyl diphosphate synthase AV939_RS05070 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AV939_RS05070 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AV939_RS05070 PF13288 DXP reductoisomerase C-terminal domain AV939_RS05075 PF02163 Peptidase family M50 AV939_RS05075 PF17820 PDZ domain AV939_RS05080 PF01103 Surface antigen AV939_RS05080 PF07244 Surface antigen variable number repeat AV939_RS05090 PF07977 FabA-like domain AV939_RS05095 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS05095 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AV939_RS05100 PF02684 Lipid-A-disaccharide synthetase AV939_RS05105 PF01351 Ribonuclease HII AV939_RS05110 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV939_RS05110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV939_RS05110 PF02811 PHP domain AV939_RS05110 PF01336 OB-fold nucleic acid binding domain AV939_RS05110 PF14579 Helix-hairpin-helix motif AV939_RS05115 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AV939_RS05120 PF09179 TilS substrate binding domain AV939_RS05120 PF01171 PP-loop family AV939_RS05120 PF11734 TilS substrate C-terminal domain AV939_RS05125 PF03707 Bacterial signalling protein N terminal repeat AV939_RS05125 PF00563 EAL domain AV939_RS05125 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS05130 PF02254 TrkA-N domain AV939_RS05130 PF02080 TrkA-C domain AV939_RS05130 PF00999 Sodium/hydrogen exchanger family AV939_RS05140 PF14437 MafB19-like deaminase AV939_RS05145 PF01464 Transglycosylase SLT domain AV939_RS05145 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV939_RS05150 PF02769 AIR synthase related protein, C-terminal domain AV939_RS05150 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AV939_RS05150 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AV939_RS05155 PF01713 Smr domain AV939_RS05180 PF01548 Transposase AV939_RS05180 PF02371 Transposase IS116/IS110/IS902 family AV939_RS05185 PF00270 DEAD/DEAH box helicase AV939_RS05185 PF00271 Helicase conserved C-terminal domain AV939_RS05190 PF01144 Coenzyme A transferase AV939_RS05195 PF01144 Coenzyme A transferase AV939_RS05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS05200 PF03466 LysR substrate binding domain AV939_RS05215 PF03466 LysR substrate binding domain AV939_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS05220 PF03313 Serine dehydratase alpha chain AV939_RS05220 PF03315 Serine dehydratase beta chain AV939_RS05225 PF00293 NUDIX domain AV939_RS05230 PF04715 Anthranilate synthase component I, N terminal region AV939_RS05230 PF00425 chorismate binding enzyme AV939_RS05240 PF02646 RmuC family AV939_RS05245 PF00082 Subtilase family AV939_RS05245 PF02225 PA domain AV939_RS05245 PF05922 Peptidase inhibitor I9 AV939_RS05245 PF13860 FlgD Ig-like domain AV939_RS05250 PF00676 Dehydrogenase E1 component AV939_RS05255 PF02779 Transketolase, pyrimidine binding domain AV939_RS05255 PF02780 Transketolase, C-terminal domain AV939_RS05260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV939_RS05260 PF00364 Biotin-requiring enzyme AV939_RS05260 PF02817 e3 binding domain AV939_RS05265 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AV939_RS05270 PF00069 Protein kinase domain AV939_RS05280 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS05285 PF00266 Aminotransferase class-V AV939_RS05295 PF13185 GAF domain AV939_RS05305 PF17516 ProQ C-terminal domain AV939_RS05305 PF04352 ProQ/FINO family AV939_RS05310 PF11818 C-terminal domain of tail specific protease (DUF3340) AV939_RS05310 PF00595 PDZ domain AV939_RS05310 PF17804 Tail specific protease N-terminal domain AV939_RS05310 PF03572 Peptidase family S41 AV939_RS05315 PF00209 Sodium:neurotransmitter symporter family AV939_RS05320 PF03553 Na+/H+ antiporter family AV939_RS05325 PF01433 Peptidase family M1 domain AV939_RS05325 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AV939_RS05325 PF11940 Domain of unknown function (DUF3458) Ig-like fold AV939_RS05340 PF07044 Protein of unknown function (DUF1329) AV939_RS05355 PF05088 Bacterial NAD-glutamate dehydrogenase AV939_RS05360 PF01180 Dihydroorotate dehydrogenase AV939_RS05365 PF10672 S-adenosylmethionine-dependent methyltransferase AV939_RS05365 PF01170 Putative RNA methylase family UPF0020 AV939_RS05365 PF02926 THUMP domain AV939_RS05375 PF00005 ABC transporter AV939_RS05375 PF16326 ABC transporter C-terminal domain AV939_RS05375 PF12848 ABC transporter AV939_RS05385 PF04957 Ribosome modulation factor AV939_RS05390 PF07977 FabA-like domain AV939_RS05400 PF03441 FAD binding domain of DNA photolyase AV939_RS05400 PF00875 DNA photolyase AV939_RS05405 PF03441 FAD binding domain of DNA photolyase AV939_RS05405 PF00875 DNA photolyase AV939_RS05410 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AV939_RS05435 PF01219 Prokaryotic diacylglycerol kinase AV939_RS05440 PF00582 Universal stress protein family AV939_RS05450 PF01645 Conserved region in glutamate synthase AV939_RS05460 PF00210 Ferritin-like domain AV939_RS05465 PF00210 Ferritin-like domain AV939_RS05475 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV939_RS05490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV939_RS05490 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AV939_RS05500 PF00403 Heavy-metal-associated domain AV939_RS05515 PF00027 Cyclic nucleotide-binding domain AV939_RS05515 PF13545 Crp-like helix-turn-helix domain AV939_RS05520 PF00582 Universal stress protein family AV939_RS05525 PF01171 PP-loop family AV939_RS05530 PF01734 Patatin-like phospholipase AV939_RS05550 PF01810 LysE type translocator AV939_RS05555 PF02146 Sir2 family AV939_RS05560 PF00581 Rhodanese-like domain AV939_RS05565 PF08534 Redoxin AV939_RS05570 PF03942 DTW domain AV939_RS05610 PF01066 CDP-alcohol phosphatidyltransferase AV939_RS05615 PF01541 GIY-YIG catalytic domain AV939_RS05615 PF02151 UvrB/uvrC motif AV939_RS05615 PF08459 UvrC Helix-hairpin-helix N-terminal AV939_RS05620 PF00072 Response regulator receiver domain AV939_RS05620 PF00196 Bacterial regulatory proteins, luxR family AV939_RS05625 PF17954 Quercetinase C-terminal cupin domain AV939_RS05625 PF02678 Pirin AV939_RS05635 PF12867 DinB superfamily AV939_RS05635 PF03781 Sulfatase-modifying factor enzyme 1 AV939_RS05655 PF08521 Two-component sensor kinase N-terminal AV939_RS05655 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS05655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS05660 PF00486 Transcriptional regulatory protein, C terminal AV939_RS05660 PF00072 Response regulator receiver domain AV939_RS05675 PF00144 Beta-lactamase AV939_RS05685 PF01027 Inhibitor of apoptosis-promoting Bax1 AV939_RS05690 PF02635 DsrE/DsrF-like family AV939_RS05695 PF02635 DsrE/DsrF-like family AV939_RS05705 PF04358 DsrC like protein AV939_RS05715 PF02403 Seryl-tRNA synthetase N-terminal domain AV939_RS05715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV939_RS05720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AV939_RS05725 PF16193 AAA C-terminal domain AV939_RS05725 PF12002 MgsA AAA+ ATPase C terminal AV939_RS05725 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS05730 PF03548 Outer membrane lipoprotein carrier protein LolA AV939_RS05735 PF17854 FtsK alpha domain AV939_RS05735 PF09397 Ftsk gamma domain AV939_RS05735 PF01580 FtsK/SpoIIIE family AV939_RS05735 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AV939_RS05740 PF01037 Lrp/AsnC ligand binding domain AV939_RS05745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV939_RS05745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV939_RS05750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AV939_RS05755 PF18073 Rubredoxin metal binding domain AV939_RS05760 PF06305 Lipopolysaccharide assembly protein A domain AV939_RS05770 PF00216 Bacterial DNA-binding protein AV939_RS05775 PF00575 S1 RNA binding domain AV939_RS05780 PF02224 Cytidylate kinase AV939_RS05785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV939_RS05790 PF00266 Aminotransferase class-V AV939_RS05795 PF00521 DNA gyrase/topoisomerase IV, subunit A AV939_RS05795 PF03989 DNA gyrase C-terminal domain, beta-propeller AV939_RS05805 PF03477 ATP cone domain AV939_RS05805 PF02867 Ribonucleotide reductase, barrel domain AV939_RS05805 PF00317 Ribonucleotide reductase, all-alpha domain AV939_RS05810 PF00268 Ribonucleotide reductase, small chain AV939_RS05815 PF00111 2Fe-2S iron-sulfur cluster binding domain AV939_RS05820 PF18698 Histidine kinase sensor domain AV939_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS05820 PF00672 HAMP domain AV939_RS05820 PF00989 PAS fold AV939_RS05820 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS05825 PF00072 Response regulator receiver domain AV939_RS05825 PF00486 Transcriptional regulatory protein, C terminal AV939_RS05850 PF13411 MerR HTH family regulatory protein AV939_RS05850 PF07739 TipAS antibiotic-recognition domain AV939_RS05900 PF13676 TIR domain AV939_RS05920 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AV939_RS05945 PF00005 ABC transporter AV939_RS05960 PF00593 TonB dependent receptor AV939_RS05960 PF07715 TonB-dependent Receptor Plug Domain AV939_RS05970 PF00892 EamA-like transporter family AV939_RS05975 PF01259 SAICAR synthetase AV939_RS05980 PF06804 NlpB/DapX lipoprotein AV939_RS05985 PF00701 Dihydrodipicolinate synthetase family AV939_RS05995 PF00578 AhpC/TSA family AV939_RS06000 PF01594 AI-2E family transporter AV939_RS06005 PF01435 Peptidase family M48 AV939_RS06015 PF03960 ArsC family AV939_RS06020 PF03358 NADPH-dependent FMN reductase AV939_RS06035 PF00308 Bacterial dnaA protein AV939_RS06045 PF02769 AIR synthase related protein, C-terminal domain AV939_RS06045 PF00586 AIR synthase related protein, N-terminal domain AV939_RS06050 PF00551 Formyl transferase AV939_RS06060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS06060 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS06060 PF09317 Domain of unknown function (DUF1974) AV939_RS06060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS06070 PF00072 Response regulator receiver domain AV939_RS06070 PF00196 Bacterial regulatory proteins, luxR family AV939_RS06075 PF13649 Methyltransferase domain AV939_RS06080 PF08003 Protein of unknown function (DUF1698) AV939_RS06085 PF00485 Phosphoribulokinase / Uridine kinase family AV939_RS06100 PF00128 Alpha amylase, catalytic domain AV939_RS06105 PF00994 Probable molybdopterin binding domain AV939_RS06105 PF03453 MoeA N-terminal region (domain I and II) AV939_RS06105 PF03454 MoeA C-terminal region (domain IV) AV939_RS06110 PF01554 MatE AV939_RS06130 PF00291 Pyridoxal-phosphate dependent enzyme AV939_RS06145 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS06160 PF02525 Flavodoxin-like fold AV939_RS06165 PF01053 Cys/Met metabolism PLP-dependent enzyme AV939_RS06180 PF00155 Aminotransferase class I and II AV939_RS06185 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AV939_RS06200 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS06200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS06200 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV939_RS06200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS06205 PF02311 AraC-like ligand binding domain AV939_RS06205 PF12833 Helix-turn-helix domain AV939_RS06210 PF07715 TonB-dependent Receptor Plug Domain AV939_RS06210 PF00593 TonB dependent receptor AV939_RS06220 PF00873 AcrB/AcrD/AcrF family AV939_RS06225 PF00529 HlyD membrane-fusion protein of T1SS AV939_RS06225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS06235 PF00766 Electron transfer flavoprotein FAD-binding domain AV939_RS06235 PF01012 Electron transfer flavoprotein domain AV939_RS06240 PF01012 Electron transfer flavoprotein domain AV939_RS06250 PF00816 H-NS histone family AV939_RS06255 PF12697 Alpha/beta hydrolase family AV939_RS06265 PF00258 Flavodoxin AV939_RS06270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS06270 PF00672 HAMP domain AV939_RS06275 PF01475 Ferric uptake regulator family AV939_RS06280 PF02447 GntP family permease AV939_RS06290 PF00356 Bacterial regulatory proteins, lacI family AV939_RS06295 PF01063 Amino-transferase class IV AV939_RS06300 PF02626 Carboxyltransferase domain, subdomain A and B AV939_RS06310 PF03746 LamB/YcsF family AV939_RS06315 PF17783 CvfB-like winged helix domain AV939_RS06315 PF13509 S1 domain AV939_RS06320 PF02566 OsmC-like protein AV939_RS06325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS06330 PF00873 AcrB/AcrD/AcrF family AV939_RS06335 PF00873 AcrB/AcrD/AcrF family AV939_RS06350 PF00155 Aminotransferase class I and II AV939_RS06360 PF13286 Phosphohydrolase-associated domain AV939_RS06360 PF01966 HD domain AV939_RS06370 PF00174 Oxidoreductase molybdopterin binding domain AV939_RS06375 PF01794 Ferric reductase like transmembrane component AV939_RS06380 PF09335 SNARE associated Golgi protein AV939_RS06390 PF02810 SEC-C motif AV939_RS06400 PF01717 Cobalamin-independent synthase, Catalytic domain AV939_RS06400 PF08267 Cobalamin-independent synthase, N-terminal domain AV939_RS06425 PF09905 DNA-binding protein VF530 AV939_RS06435 PF00583 Acetyltransferase (GNAT) family AV939_RS06440 PF00005 ABC transporter AV939_RS06450 PF00575 S1 RNA binding domain AV939_RS06450 PF01138 3' exoribonuclease family, domain 1 AV939_RS06450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AV939_RS06450 PF00013 KH domain AV939_RS06450 PF03725 3' exoribonuclease family, domain 2 AV939_RS06465 PF00171 Aldehyde dehydrogenase family AV939_RS06470 PF00696 Amino acid kinase family AV939_RS06475 PF00474 Sodium:solute symporter family AV939_RS06495 PF00781 Diacylglycerol kinase catalytic domain AV939_RS06505 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS06505 PF00563 EAL domain AV939_RS06505 PF03707 Bacterial signalling protein N terminal repeat AV939_RS06515 PF03840 Preprotein translocase SecG subunit AV939_RS06520 PF00121 Triosephosphate isomerase AV939_RS06525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV939_RS06525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV939_RS06525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV939_RS06525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV939_RS06530 PF00809 Pterin binding enzyme AV939_RS06535 PF17862 AAA+ lid domain AV939_RS06535 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS06535 PF01434 Peptidase family M41 AV939_RS06535 PF06480 FtsH Extracellular AV939_RS06540 PF01728 FtsJ-like methyltransferase AV939_RS06545 PF01985 CRS1 / YhbY (CRM) domain AV939_RS06550 PF00106 short chain dehydrogenase AV939_RS06555 PF13654 AAA domain AV939_RS06555 PF05362 Lon protease (S16) C-terminal proteolytic domain AV939_RS06560 PF08264 Anticodon-binding domain of tRNA AV939_RS06560 PF00133 tRNA synthetases class I (I, L, M and V) AV939_RS06560 PF13603 Leucyl-tRNA synthetase, Domain 2 AV939_RS06570 PF06144 DNA polymerase III, delta subunit AV939_RS06570 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AV939_RS06575 PF01467 Cytidylyltransferase-like AV939_RS06585 PF02590 Predicted SPOUT methyltransferase AV939_RS06590 PF03717 Penicillin-binding Protein dimerisation domain AV939_RS06590 PF00905 Penicillin binding protein transpeptidase domain AV939_RS06595 PF01098 Cell cycle protein AV939_RS06600 PF05036 Sporulation related domain AV939_RS06600 PF03330 Lytic transglycolase AV939_RS06605 PF07943 Penicillin-binding protein 5, C-terminal domain AV939_RS06605 PF00768 D-alanyl-D-alanine carboxypeptidase AV939_RS06610 PF04359 Protein of unknown function (DUF493) AV939_RS06615 PF03099 Biotin/lipoate A/B protein ligase family AV939_RS06620 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AV939_RS06620 PF04055 Radical SAM superfamily AV939_RS06630 PF00710 Asparaginase, N-terminal AV939_RS06630 PF17763 Glutaminase/Asparaginase C-terminal domain AV939_RS06640 PF00881 Nitroreductase family AV939_RS06655 PF01343 Peptidase family S49 AV939_RS06660 PF17283 SprT-like zinc ribbon domain AV939_RS06660 PF10263 SprT-like family AV939_RS06665 PF04217 Protein of unknown function, DUF412 AV939_RS06675 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS06680 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AV939_RS06685 PF04377 Arginine-tRNA-protein transferase, C terminus AV939_RS06685 PF04376 Arginine-tRNA-protein transferase, N terminus AV939_RS06690 PF01176 Translation initiation factor 1A / IF-1 AV939_RS06695 PF07724 AAA domain (Cdc48 subfamily) AV939_RS06695 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS06695 PF17871 AAA lid domain AV939_RS06695 PF02861 Clp amino terminal domain, pathogenicity island component AV939_RS06695 PF10431 C-terminal, D2-small domain, of ClpB protein AV939_RS06700 PF02617 ATP-dependent Clp protease adaptor protein ClpS AV939_RS06705 PF00313 'Cold-shock' DNA-binding domain AV939_RS06710 PF03971 Monomeric isocitrate dehydrogenase AV939_RS06715 PF00849 RNA pseudouridylate synthase AV939_RS06725 PF04356 Protein of unknown function (DUF489) AV939_RS06730 PF00206 Lyase AV939_RS06730 PF08328 Adenylosuccinate lyase C-terminal AV939_RS06735 PF00211 Adenylate and Guanylate cyclase catalytic domain AV939_RS06740 PF08007 Cupin superfamily protein AV939_RS06755 PF13183 4Fe-4S dicluster domain AV939_RS06755 PF01565 FAD binding domain AV939_RS06755 PF02913 FAD linked oxidases, C-terminal domain AV939_RS06760 PF06865 Pyrimidine/purine nucleoside phosphorylase AV939_RS06765 PF00144 Beta-lactamase AV939_RS06765 PF11954 Domain of unknown function (DUF3471) AV939_RS06810 PF03551 Transcriptional regulator PadR-like family AV939_RS06845 PF14592 Chondroitinase B AV939_RS06850 PF01202 Shikimate kinase AV939_RS06875 PF00356 Bacterial regulatory proteins, lacI family AV939_RS06880 PF03547 Membrane transport protein AV939_RS06890 PF01799 [2Fe-2S] binding domain AV939_RS06890 PF00111 2Fe-2S iron-sulfur cluster binding domain AV939_RS06895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV939_RS06900 PF00391 PEP-utilising enzyme, mobile domain AV939_RS06900 PF02896 PEP-utilising enzyme, TIM barrel domain AV939_RS06900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AV939_RS06905 PF03618 Kinase/pyrophosphorylase AV939_RS06920 PF14552 Tautomerase enzyme AV939_RS06935 PF04191 Phospholipid methyltransferase AV939_RS06940 PF06271 RDD family AV939_RS06960 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS06960 PF00072 Response regulator receiver domain AV939_RS06965 PF13460 NAD(P)H-binding AV939_RS06975 PF01026 TatD related DNase AV939_RS06980 PF09115 DNA polymerase III, delta subunit, C terminal AV939_RS06985 PF02223 Thymidylate kinase AV939_RS06990 PF02618 YceG-like family AV939_RS06995 PF01063 Amino-transferase class IV AV939_RS07000 PF00109 Beta-ketoacyl synthase, N-terminal domain AV939_RS07000 PF02801 Beta-ketoacyl synthase, C-terminal domain AV939_RS07005 PF00550 Phosphopantetheine attachment site AV939_RS07015 PF00698 Acyl transferase domain AV939_RS07020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV939_RS07020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV939_RS07025 PF02504 Fatty acid synthesis protein AV939_RS07030 PF01783 Ribosomal L32p protein family AV939_RS07035 PF02620 Large ribosomal RNA subunit accumulation protein YceD AV939_RS07040 PF02545 Maf-like protein AV939_RS07045 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS07050 PF01479 S4 domain AV939_RS07050 PF00849 RNA pseudouridylate synthase AV939_RS07055 PF00575 S1 RNA binding domain AV939_RS07055 PF10150 Ribonuclease E/G family AV939_RS07055 PF12111 Polyribonucleotide phosphorylase C terminal AV939_RS07070 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS07075 PF13673 Acetyltransferase (GNAT) domain AV939_RS07085 PF03466 LysR substrate binding domain AV939_RS07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS07095 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS07110 PF00962 Adenosine/AMP deaminase AV939_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS07120 PF03466 LysR substrate binding domain AV939_RS07130 PF01751 Toprim domain AV939_RS07130 PF01396 Topoisomerase DNA binding C4 zinc finger AV939_RS07130 PF01131 DNA topoisomerase AV939_RS07130 PF08272 Topoisomerase I zinc-ribbon-like AV939_RS07135 PF04996 Succinylarginine dihydrolase AV939_RS07145 PF00375 Sodium:dicarboxylate symporter family AV939_RS07150 PF02687 FtsX-like permease family AV939_RS07150 PF12704 MacB-like periplasmic core domain AV939_RS07155 PF00005 ABC transporter AV939_RS07160 PF12792 CSS motif domain associated with EAL AV939_RS07160 PF00563 EAL domain AV939_RS07190 PF00929 Exonuclease AV939_RS07195 PF00075 RNase H AV939_RS07200 PF16197 Ketoacyl-synthetase C-terminal extension AV939_RS07200 PF00109 Beta-ketoacyl synthase, N-terminal domain AV939_RS07200 PF14765 Polyketide synthase dehydratase AV939_RS07200 PF02801 Beta-ketoacyl synthase, C-terminal domain AV939_RS07200 PF08659 KR domain AV939_RS07200 PF00550 Phosphopantetheine attachment site AV939_RS07200 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS07200 PF00698 Acyl transferase domain AV939_RS07205 PF10672 S-adenosylmethionine-dependent methyltransferase AV939_RS07205 PF17785 PUA-like domain AV939_RS07220 PF00271 Helicase conserved C-terminal domain AV939_RS07220 PF11898 Domain of unknown function (DUF3418) AV939_RS07220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AV939_RS07220 PF00270 DEAD/DEAH box helicase AV939_RS07220 PF04408 Helicase associated domain (HA2) AV939_RS07250 PF02333 Phytase AV939_RS07260 PF00672 HAMP domain AV939_RS07260 PF01627 Hpt domain AV939_RS07260 PF00072 Response regulator receiver domain AV939_RS07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS07260 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS07260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS07265 PF00929 Exonuclease AV939_RS07265 PF08411 Exonuclease C-terminal AV939_RS07275 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07275 PF17151 Periplasmic sensor domain AV939_RS07280 PF00108 Thiolase, N-terminal domain AV939_RS07280 PF02803 Thiolase, C-terminal domain AV939_RS07285 PF13411 MerR HTH family regulatory protein AV939_RS07290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS07290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS07290 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS07295 PF01039 Carboxyl transferase domain AV939_RS07300 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS07305 PF00289 Biotin carboxylase, N-terminal domain AV939_RS07305 PF00364 Biotin-requiring enzyme AV939_RS07305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV939_RS07305 PF18140 Propionyl-coenzyme A carboxylase BT domain AV939_RS07305 PF02785 Biotin carboxylase C-terminal domain AV939_RS07310 PF00682 HMGL-like AV939_RS07320 PF03707 Bacterial signalling protein N terminal repeat AV939_RS07320 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07320 PF00563 EAL domain AV939_RS07335 PF01156 Inosine-uridine preferring nucleoside hydrolase AV939_RS07340 PF00483 Nucleotidyl transferase AV939_RS07350 PF07690 Major Facilitator Superfamily AV939_RS07385 PF03372 Endonuclease/Exonuclease/phosphatase family AV939_RS07400 PF02687 FtsX-like permease family AV939_RS07400 PF12704 MacB-like periplasmic core domain AV939_RS07410 PF17757 UvrB interaction domain AV939_RS07410 PF02559 CarD-like/TRCF domain AV939_RS07410 PF03461 TRCF domain AV939_RS07410 PF00270 DEAD/DEAH box helicase AV939_RS07410 PF00271 Helicase conserved C-terminal domain AV939_RS07420 PF01923 Cobalamin adenosyltransferase AV939_RS07425 PF00939 Sodium:sulfate symporter transmembrane region AV939_RS07430 PF00933 Glycosyl hydrolase family 3 N terminal domain AV939_RS07435 PF01804 Penicillin amidase AV939_RS07440 PF04073 Aminoacyl-tRNA editing domain AV939_RS07450 PF00216 Bacterial DNA-binding protein AV939_RS07455 PF03484 tRNA synthetase B5 domain AV939_RS07455 PF03483 B3/4 domain AV939_RS07455 PF01588 Putative tRNA binding domain AV939_RS07455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AV939_RS07455 PF03147 Ferredoxin-fold anticodon binding domain AV939_RS07460 PF01409 tRNA synthetases class II core domain (F) AV939_RS07460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AV939_RS07465 PF01757 Acyltransferase family AV939_RS07495 PF00535 Glycosyl transferase family 2 AV939_RS07500 PF00535 Glycosyl transferase family 2 AV939_RS07510 PF13477 Glycosyl transferase 4-like AV939_RS07510 PF00534 Glycosyl transferases group 1 AV939_RS07515 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS07515 PF06426 Serine acetyltransferase, N-terminal AV939_RS07525 PF13439 Glycosyltransferase Family 4 AV939_RS07525 PF00534 Glycosyl transferases group 1 AV939_RS07535 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07535 PF00563 EAL domain AV939_RS07535 PF03707 Bacterial signalling protein N terminal repeat AV939_RS07565 PF13614 AAA domain AV939_RS07570 PF10531 SLBB domain AV939_RS07570 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AV939_RS07570 PF02563 Polysaccharide biosynthesis/export protein AV939_RS07580 PF02397 Bacterial sugar transferase AV939_RS07590 PF00453 Ribosomal protein L20 AV939_RS07595 PF01632 Ribosomal protein L35 AV939_RS07600 PF05198 Translation initiation factor IF-3, N-terminal domain AV939_RS07600 PF00707 Translation initiation factor IF-3, C-terminal domain AV939_RS07605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV939_RS07605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV939_RS07605 PF02824 TGS domain AV939_RS07605 PF03129 Anticodon binding domain AV939_RS07645 PF01425 Amidase AV939_RS07655 PF01925 Sulfite exporter TauE/SafE AV939_RS07660 PF00266 Aminotransferase class-V AV939_RS07665 PF01546 Peptidase family M20/M25/M40 AV939_RS07665 PF07687 Peptidase dimerisation domain AV939_RS07675 PF00962 Adenosine/AMP deaminase AV939_RS07680 PF00860 Permease family AV939_RS07685 PF00593 TonB dependent receptor AV939_RS07685 PF07715 TonB-dependent Receptor Plug Domain AV939_RS07695 PF09308 LuxQ, periplasmic AV939_RS07695 PF00072 Response regulator receiver domain AV939_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS07695 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS07700 PF00072 Response regulator receiver domain AV939_RS07700 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07705 PF03707 Bacterial signalling protein N terminal repeat AV939_RS07705 PF00563 EAL domain AV939_RS07705 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07715 PF00962 Adenosine/AMP deaminase AV939_RS07720 PF00860 Permease family AV939_RS07735 PF00440 Bacterial regulatory proteins, tetR family AV939_RS07735 PF08362 YcdC-like protein, C-terminal region AV939_RS07740 PF01799 [2Fe-2S] binding domain AV939_RS07740 PF00111 2Fe-2S iron-sulfur cluster binding domain AV939_RS07745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV939_RS07745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV939_RS07760 PF00576 HIUase/Transthyretin family AV939_RS07765 PF01979 Amidohydrolase family AV939_RS07775 PF05231 MASE1 AV939_RS07775 PF08447 PAS fold AV939_RS07775 PF08448 PAS fold AV939_RS07775 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07775 PF00563 EAL domain AV939_RS07775 PF13426 PAS domain AV939_RS07780 PF12706 Beta-lactamase superfamily domain AV939_RS07795 PF17158 Membrane-associated sensor, integral membrane domain AV939_RS07795 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07810 PF04209 homogentisate 1,2-dioxygenase AV939_RS07815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV939_RS07835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AV939_RS07840 PF03960 ArsC family AV939_RS07845 PF07687 Peptidase dimerisation domain AV939_RS07845 PF01546 Peptidase family M20/M25/M40 AV939_RS07860 PF01906 Putative heavy-metal-binding AV939_RS07870 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AV939_RS07875 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS07875 PF00563 EAL domain AV939_RS07875 PF03707 Bacterial signalling protein N terminal repeat AV939_RS07880 PF00343 Carbohydrate phosphorylase AV939_RS07885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV939_RS07885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV939_RS07885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV939_RS07885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV939_RS07890 PF17206 SeqA protein N-terminal domain AV939_RS07890 PF03925 SeqA protein C-terminal domain AV939_RS07895 PF17863 AAA lid domain AV939_RS07895 PF07726 ATPase family associated with various cellular activities (AAA) AV939_RS07905 PF01841 Transglutaminase-like superfamily AV939_RS07905 PF11992 Domain of unknown function (DUF3488) AV939_RS07905 PF13559 Domain of unknown function (DUF4129) AV939_RS07910 PF01226 Formate/nitrite transporter AV939_RS07915 PF00069 Protein kinase domain AV939_RS07915 PF03793 PASTA domain AV939_RS07920 PF02560 Cyanate lyase C-terminal domain AV939_RS07925 PF00679 Elongation factor G C-terminus AV939_RS07925 PF14492 Elongation Factor G, domain II AV939_RS07925 PF03144 Elongation factor Tu domain 2 AV939_RS07925 PF00009 Elongation factor Tu GTP binding domain AV939_RS07925 PF03764 Elongation factor G, domain IV AV939_RS07930 PF18125 RlmM ferredoxin-like domain AV939_RS07930 PF01728 FtsJ-like methyltransferase AV939_RS07945 PF03466 LysR substrate binding domain AV939_RS07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS07955 PF00793 DAHP synthetase I family AV939_RS07960 PF04247 Invasion gene expression up-regulator, SirB AV939_RS07965 PF11849 Domain of unknown function (DUF3369) AV939_RS07970 PF17827 PrmC N-terminal domain AV939_RS07970 PF13847 Methyltransferase domain AV939_RS07975 PF00472 RF-1 domain AV939_RS07975 PF03462 PCRF domain AV939_RS07980 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AV939_RS07980 PF01488 Shikimate / quinate 5-dehydrogenase AV939_RS07980 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AV939_RS07985 PF03550 Outer membrane lipoprotein LolB AV939_RS07990 PF00288 GHMP kinases N terminal domain AV939_RS07990 PF08544 GHMP kinases C terminal AV939_RS08000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV939_RS08000 PF14572 Phosphoribosyl synthetase-associated domain AV939_RS08005 PF08448 PAS fold AV939_RS08005 PF00563 EAL domain AV939_RS08005 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS08005 PF08447 PAS fold AV939_RS08015 PF00107 Zinc-binding dehydrogenase AV939_RS08015 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS08020 PF14693 Ribosomal protein TL5, C-terminal domain AV939_RS08020 PF01386 Ribosomal L25p family AV939_RS08025 PF01195 Peptidyl-tRNA hydrolase AV939_RS08030 PF01926 50S ribosome-binding GTPase AV939_RS08030 PF06071 Protein of unknown function (DUF933) AV939_RS08035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV939_RS08060 PF01235 Sodium:alanine symporter family AV939_RS08065 PF01613 Flavin reductase like domain AV939_RS08080 PF01494 FAD binding domain AV939_RS08085 PF01938 TRAM domain AV939_RS08085 PF04055 Radical SAM superfamily AV939_RS08085 PF00919 Uncharacterized protein family UPF0004 AV939_RS08090 PF02562 PhoH-like protein AV939_RS08095 PF02130 Uncharacterized protein family UPF0054 AV939_RS08100 PF03471 Transporter associated domain AV939_RS08100 PF00571 CBS domain AV939_RS08105 PF00795 Carbon-nitrogen hydrolase AV939_RS08110 PF01515 Phosphate acetyl/butaryl transferase AV939_RS08110 PF07085 DRTGG domain AV939_RS08115 PF00871 Acetokinase family AV939_RS08120 PF00011 Hsp20/alpha crystallin family AV939_RS08140 PF00672 HAMP domain AV939_RS08140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS08140 PF12729 Four helix bundle sensory module for signal transduction AV939_RS08145 PF03449 Transcription elongation factor, N-terminal AV939_RS08145 PF01272 Transcription elongation factor, GreA/GreB, C-term AV939_RS08150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AV939_RS08150 PF02142 MGS-like domain AV939_RS08150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV939_RS08155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AV939_RS08155 PF00117 Glutamine amidotransferase class-I AV939_RS08160 PF05173 Dihydrodipicolinate reductase, C-terminus AV939_RS08160 PF01113 Dihydrodipicolinate reductase, N-terminus AV939_RS08170 PF16177 Acetyl-coenzyme A synthetase N-terminus AV939_RS08170 PF00501 AMP-binding enzyme AV939_RS08170 PF13193 AMP-binding enzyme C-terminal domain AV939_RS08175 PF00563 EAL domain AV939_RS08175 PF00360 Phytochrome region AV939_RS08175 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS08175 PF01590 GAF domain AV939_RS08180 PF01322 Cytochrome C' AV939_RS08185 PF00684 DnaJ central domain AV939_RS08185 PF01556 DnaJ C terminal domain AV939_RS08185 PF00226 DnaJ domain AV939_RS08190 PF00012 Hsp70 protein AV939_RS08195 PF01025 GrpE AV939_RS08200 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS08200 PF00072 Response regulator receiver domain AV939_RS08200 PF09308 LuxQ, periplasmic AV939_RS08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS08205 PF00072 Response regulator receiver domain AV939_RS08205 PF00196 Bacterial regulatory proteins, luxR family AV939_RS08210 PF07715 TonB-dependent Receptor Plug Domain AV939_RS08210 PF00593 TonB dependent receptor AV939_RS08220 PF00561 alpha/beta hydrolase fold AV939_RS08235 PF01513 ATP-NAD kinase AV939_RS08240 PF02463 RecF/RecN/SMC N terminal domain AV939_RS08245 PF04355 SmpA / OmlA family AV939_RS08250 PF05724 Thiopurine S-methyltransferase (TPMT) AV939_RS08255 PF04286 Protein of unknown function (DUF445) AV939_RS08260 PF03960 ArsC family AV939_RS08270 PF14602 Hexapeptide repeat of succinyl-transferase AV939_RS08270 PF12464 Maltose acetyltransferase AV939_RS08275 PF00248 Aldo/keto reductase family AV939_RS08285 PF01479 S4 domain AV939_RS08285 PF00849 RNA pseudouridylate synthase AV939_RS08290 PF04079 Segregation and condensation complex subunit ScpB AV939_RS08295 PF02616 Segregation and condensation protein ScpA AV939_RS08300 PF01300 Telomere recombination AV939_RS08305 PF02811 PHP domain AV939_RS08310 PF00425 chorismate binding enzyme AV939_RS08310 PF04715 Anthranilate synthase component I, N terminal region AV939_RS08315 PF00117 Glutamine amidotransferase class-I AV939_RS08320 PF00591 Glycosyl transferase family, a/b domain AV939_RS08320 PF02885 Glycosyl transferase family, helical bundle domain AV939_RS08325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AV939_RS08325 PF00218 Indole-3-glycerol phosphate synthase AV939_RS08330 PF00291 Pyridoxal-phosphate dependent enzyme AV939_RS08335 PF00290 Tryptophan synthase alpha chain AV939_RS08340 PF03795 YCII-related domain AV939_RS08355 PF00486 Transcriptional regulatory protein, C terminal AV939_RS08355 PF00072 Response regulator receiver domain AV939_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS08360 PF08918 PhoQ Sensor AV939_RS08365 PF01594 AI-2E family transporter AV939_RS08370 PF02152 Dihydroneopterin aldolase AV939_RS08375 PF01370 NAD dependent epimerase/dehydratase family AV939_RS08375 PF08338 Domain of unknown function (DUF1731) AV939_RS08385 PF00005 ABC transporter AV939_RS08390 PF13472 GDSL-like Lipase/Acylhydrolase family AV939_RS08405 PF01207 Dihydrouridine synthase (Dus) AV939_RS08435 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV939_RS08455 PF00072 Response regulator receiver domain AV939_RS08455 PF00486 Transcriptional regulatory protein, C terminal AV939_RS08465 PF06463 Molybdenum Cofactor Synthesis C AV939_RS08465 PF04055 Radical SAM superfamily AV939_RS08470 PF00664 ABC transporter transmembrane region AV939_RS08470 PF00005 ABC transporter AV939_RS08485 PF01474 Class-II DAHP synthetase family AV939_RS08490 PF00005 ABC transporter AV939_RS08495 PF01032 FecCD transport family AV939_RS08500 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV939_RS08505 PF03575 Peptidase family S51 AV939_RS08515 PF08241 Methyltransferase domain AV939_RS08515 PF12697 Alpha/beta hydrolase family AV939_RS08520 PF00155 Aminotransferase class I and II AV939_RS08525 PF06968 Biotin and Thiamin Synthesis associated domain AV939_RS08525 PF04055 Radical SAM superfamily AV939_RS08530 PF00202 Aminotransferase class-III AV939_RS08545 PF00583 Acetyltransferase (GNAT) family AV939_RS08550 PF18030 RimK PreATP-grasp domain AV939_RS08550 PF08443 RimK-like ATP-grasp domain AV939_RS08555 PF01699 Sodium/calcium exchanger protein AV939_RS08565 PF00152 tRNA synthetases class II (D, K and N) AV939_RS08565 PF01336 OB-fold nucleic acid binding domain AV939_RS08575 PF04403 Paraquat-inducible protein A AV939_RS08580 PF02470 MlaD protein AV939_RS08590 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS08595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS08600 PF00873 AcrB/AcrD/AcrF family AV939_RS08610 PF03466 LysR substrate binding domain AV939_RS08610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS08615 PF08361 MAATS-type transcriptional repressor, C-terminal region AV939_RS08615 PF00440 Bacterial regulatory proteins, tetR family AV939_RS08625 PF00873 AcrB/AcrD/AcrF family AV939_RS08630 PF00571 CBS domain AV939_RS08635 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS08635 PF00107 Zinc-binding dehydrogenase AV939_RS08640 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS08640 PF00107 Zinc-binding dehydrogenase AV939_RS08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS08645 PF03466 LysR substrate binding domain AV939_RS08650 PF01292 Prokaryotic cytochrome b561 AV939_RS08655 PF00106 short chain dehydrogenase AV939_RS08660 PF00296 Luciferase-like monooxygenase AV939_RS08665 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV939_RS08665 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV939_RS08690 PF07690 Major Facilitator Superfamily AV939_RS08695 PF00072 Response regulator receiver domain AV939_RS08695 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS08695 PF09308 LuxQ, periplasmic AV939_RS08735 PF00557 Metallopeptidase family M24 AV939_RS08745 PF00072 Response regulator receiver domain AV939_RS08745 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS08750 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AV939_RS08770 PF02445 Quinolinate synthetase A protein AV939_RS08790 PF13174 Tetratricopeptide repeat AV939_RS08790 PF16331 TolA binding protein trimerisation AV939_RS08795 PF00691 OmpA family AV939_RS08800 PF04052 TolB amino-terminal domain AV939_RS08800 PF07676 WD40-like Beta Propeller Repeat AV939_RS08810 PF02472 Biopolymer transport protein ExbD/TolR AV939_RS08815 PF01618 MotA/TolQ/ExbB proton channel family AV939_RS08820 PF03061 Thioesterase superfamily AV939_RS08825 PF05491 RuvB C-terminal winged helix domain AV939_RS08825 PF17864 RuvB AAA lid domain AV939_RS08825 PF05496 Holliday junction DNA helicase RuvB P-loop domain AV939_RS08830 PF07499 RuvA, C-terminal domain AV939_RS08830 PF01330 RuvA N terminal domain AV939_RS08835 PF02075 Crossover junction endodeoxyribonuclease RuvC AV939_RS08840 PF00293 NUDIX domain AV939_RS08845 PF01336 OB-fold nucleic acid binding domain AV939_RS08845 PF00152 tRNA synthetases class II (D, K and N) AV939_RS08845 PF02938 GAD domain AV939_RS08860 PF00158 Sigma-54 interaction domain AV939_RS08860 PF00072 Response regulator receiver domain AV939_RS08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS08870 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS08880 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS08880 PF03707 Bacterial signalling protein N terminal repeat AV939_RS08880 PF00563 EAL domain AV939_RS08890 PF00072 Response regulator receiver domain AV939_RS08890 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS08900 PF01253 Translation initiation factor SUI1 AV939_RS08905 PF00072 Response regulator receiver domain AV939_RS08910 PF01817 Chorismate mutase type II AV939_RS08910 PF00800 Prephenate dehydratase AV939_RS08915 PF00672 HAMP domain AV939_RS08915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS08915 PF12729 Four helix bundle sensory module for signal transduction AV939_RS08920 PF01817 Chorismate mutase type II AV939_RS08920 PF02153 Prephenate dehydrogenase AV939_RS08925 PF00793 DAHP synthetase I family AV939_RS08930 PF03458 UPF0126 domain AV939_RS08945 PF01245 Ribosomal protein L19 AV939_RS08950 PF01746 tRNA (Guanine-1)-methyltransferase AV939_RS08955 PF01782 RimM N-terminal domain AV939_RS08955 PF05239 PRC-barrel domain AV939_RS08960 PF00886 Ribosomal protein S16 AV939_RS08975 PF01053 Cys/Met metabolism PLP-dependent enzyme AV939_RS08980 PF00664 ABC transporter transmembrane region AV939_RS08980 PF00005 ABC transporter AV939_RS08985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS08990 PF00873 AcrB/AcrD/AcrF family AV939_RS08995 PF03600 Citrate transporter AV939_RS09025 PF02978 Signal peptide binding domain AV939_RS09025 PF02881 SRP54-type protein, helical bundle domain AV939_RS09025 PF00448 SRP54-type protein, GTPase domain AV939_RS09030 PF01578 Cytochrome C assembly protein AV939_RS09035 PF00571 CBS domain AV939_RS09035 PF03471 Transporter associated domain AV939_RS09035 PF01595 Cyclin M transmembrane N-terminal domain AV939_RS09045 PF00300 Histidine phosphatase superfamily (branch 1) AV939_RS09050 PF16187 Middle or third domain of peptidase_M16 AV939_RS09050 PF05193 Peptidase M16 inactive domain AV939_RS09050 PF00675 Insulinase (Peptidase family M16) AV939_RS09055 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS09055 PF00563 EAL domain AV939_RS09055 PF03707 Bacterial signalling protein N terminal repeat AV939_RS09065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV939_RS09065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV939_RS09065 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS09070 PF02803 Thiolase, C-terminal domain AV939_RS09070 PF00108 Thiolase, N-terminal domain AV939_RS09075 PF07726 ATPase family associated with various cellular activities (AAA) AV939_RS09075 PF17863 AAA lid domain AV939_RS09080 PF01882 Protein of unknown function DUF58 AV939_RS09090 PF00092 von Willebrand factor type A domain AV939_RS09095 PF07584 Aerotolerance regulator N-terminal AV939_RS09095 PF00092 von Willebrand factor type A domain AV939_RS09110 PF04545 Sigma-70, region 4 AV939_RS09110 PF04542 Sigma-70 region 2 AV939_RS09120 PF17158 Membrane-associated sensor, integral membrane domain AV939_RS09120 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS09125 PF00474 Sodium:solute symporter family AV939_RS09130 PF01507 Phosphoadenosine phosphosulfate reductase family AV939_RS09140 PF00459 Inositol monophosphatase family AV939_RS09145 PF00009 Elongation factor Tu GTP binding domain AV939_RS09150 PF02080 TrkA-C domain AV939_RS09150 PF03600 Citrate transporter AV939_RS09175 PF13537 Glutamine amidotransferase domain AV939_RS09175 PF00733 Asparagine synthase AV939_RS09185 PF04055 Radical SAM superfamily AV939_RS09190 PF06508 Queuosine biosynthesis protein QueC AV939_RS09210 PF00271 Helicase conserved C-terminal domain AV939_RS09210 PF02151 UvrB/uvrC motif AV939_RS09210 PF12344 Ultra-violet resistance protein B AV939_RS09210 PF17757 UvrB interaction domain AV939_RS09210 PF04851 Type III restriction enzyme, res subunit AV939_RS09215 PF01554 MatE AV939_RS09230 PF02508 Rnf-Nqr subunit, membrane protein AV939_RS09235 PF04060 Putative Fe-S cluster AV939_RS09240 PF10531 SLBB domain AV939_RS09240 PF13375 RnfC Barrel sandwich hybrid domain AV939_RS09240 PF12838 4Fe-4S dicluster domain AV939_RS09240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AV939_RS09245 PF03116 NQR2, RnfD, RnfE family AV939_RS09250 PF04205 FMN-binding domain AV939_RS09255 PF02508 Rnf-Nqr subunit, membrane protein AV939_RS09260 PF00633 Helix-hairpin-helix motif AV939_RS09260 PF00730 HhH-GPD superfamily base excision DNA repair protein AV939_RS09260 PF10576 Iron-sulfur binding domain of endonuclease III AV939_RS09280 PF10576 Iron-sulfur binding domain of endonuclease III AV939_RS09280 PF00730 HhH-GPD superfamily base excision DNA repair protein AV939_RS09280 PF00633 Helix-hairpin-helix motif AV939_RS09285 PF00561 alpha/beta hydrolase fold AV939_RS09290 PF07676 WD40-like Beta Propeller Repeat AV939_RS09290 PF00326 Prolyl oligopeptidase family AV939_RS09295 PF04389 Peptidase family M28 AV939_RS09295 PF02225 PA domain AV939_RS09305 PF00563 EAL domain AV939_RS09305 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS09305 PF03707 Bacterial signalling protein N terminal repeat AV939_RS09315 PF00313 'Cold-shock' DNA-binding domain AV939_RS09320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV939_RS09325 PF03009 Glycerophosphoryl diester phosphodiesterase family AV939_RS09330 PF18393 MotY N-terminal domain AV939_RS09330 PF00691 OmpA family AV939_RS09335 PF00929 Exonuclease AV939_RS09340 PF00578 AhpC/TSA family AV939_RS09340 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV939_RS09345 PF04324 BFD-like [2Fe-2S] binding domain AV939_RS09365 PF07715 TonB-dependent Receptor Plug Domain AV939_RS09365 PF00593 TonB dependent receptor AV939_RS09370 PF00462 Glutaredoxin AV939_RS09375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AV939_RS09375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AV939_RS09380 PF08298 PrkA AAA domain AV939_RS09380 PF06798 PrkA serine protein kinase C-terminal domain AV939_RS09385 PF04285 Protein of unknown function (DUF444) AV939_RS09390 PF04293 SpoVR like protein AV939_RS09405 PF01264 Chorismate synthase AV939_RS09410 PF05175 Methyltransferase small domain AV939_RS09415 PF01713 Smr domain AV939_RS09420 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS09420 PF00989 PAS fold AV939_RS09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS09425 PF00158 Sigma-54 interaction domain AV939_RS09425 PF00072 Response regulator receiver domain AV939_RS09425 PF02954 Bacterial regulatory protein, Fis family AV939_RS09430 PF12704 MacB-like periplasmic core domain AV939_RS09430 PF00005 ABC transporter AV939_RS09430 PF02687 FtsX-like permease family AV939_RS09440 PF00005 ABC transporter AV939_RS09460 PF04262 Glutamate-cysteine ligase AV939_RS09465 PF05193 Peptidase M16 inactive domain AV939_RS09465 PF00675 Insulinase (Peptidase family M16) AV939_RS09475 PF00849 RNA pseudouridylate synthase AV939_RS09480 PF02558 Ketopantoate reductase PanE/ApbA AV939_RS09480 PF08546 Ketopantoate reductase PanE/ApbA C terminal AV939_RS09485 PF00152 tRNA synthetases class II (D, K and N) AV939_RS09485 PF01336 OB-fold nucleic acid binding domain AV939_RS09490 PF03462 PCRF domain AV939_RS09490 PF00472 RF-1 domain AV939_RS09505 PF01966 HD domain AV939_RS09510 PF06155 Protein of unknown function (DUF971) AV939_RS09510 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AV939_RS09525 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS09525 PF00563 EAL domain AV939_RS09525 PF03707 Bacterial signalling protein N terminal repeat AV939_RS09530 PF03485 Arginyl tRNA synthetase N terminal domain AV939_RS09530 PF00750 tRNA synthetases class I (R) AV939_RS09530 PF05746 DALR anticodon binding domain AV939_RS09535 PF00009 Elongation factor Tu GTP binding domain AV939_RS09535 PF03144 Elongation factor Tu domain 2 AV939_RS09535 PF16658 Class II release factor RF3, C-terminal domain AV939_RS09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS09540 PF03466 LysR substrate binding domain AV939_RS09555 PF00583 Acetyltransferase (GNAT) family AV939_RS09595 PF17176 tRNA-binding domain AV939_RS09595 PF08351 Domain of unknown function (DUF1726) AV939_RS09595 PF05127 Helicase AV939_RS09595 PF13718 GNAT acetyltransferase 2 AV939_RS09605 PF03544 Gram-negative bacterial TonB protein C-terminal AV939_RS09610 PF02472 Biopolymer transport protein ExbD/TolR AV939_RS09615 PF01618 MotA/TolQ/ExbB proton channel family AV939_RS09620 PF01618 MotA/TolQ/ExbB proton channel family AV939_RS09655 PF07715 TonB-dependent Receptor Plug Domain AV939_RS09655 PF00593 TonB dependent receptor AV939_RS09660 PF13181 Tetratricopeptide repeat AV939_RS09665 PF00593 TonB dependent receptor AV939_RS09670 PF03301 Tryptophan 2,3-dioxygenase AV939_RS09685 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV939_RS09685 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV939_RS09690 PF01037 Lrp/AsnC ligand binding domain AV939_RS09695 PF14497 Glutathione S-transferase, C-terminal domain AV939_RS09695 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS09705 PF18024 Helix-turn-helix domain AV939_RS09705 PF00158 Sigma-54 interaction domain AV939_RS09710 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AV939_RS09720 PF06667 Phage shock protein B AV939_RS09725 PF04012 PspA/IM30 family AV939_RS09730 PF02954 Bacterial regulatory protein, Fis family AV939_RS09730 PF00158 Sigma-54 interaction domain AV939_RS09735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV939_RS09740 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS09745 PF12911 N-terminal TM domain of oligopeptide transport permease C AV939_RS09745 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS09750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV939_RS09750 PF00005 ABC transporter AV939_RS09755 PF00005 ABC transporter AV939_RS09760 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AV939_RS09765 PF02436 Conserved carboxylase domain AV939_RS09765 PF00682 HMGL-like AV939_RS09765 PF00364 Biotin-requiring enzyme AV939_RS09775 PF03061 Thioesterase superfamily AV939_RS09795 PF02599 Global regulator protein family AV939_RS09800 PF02272 DHHA1 domain AV939_RS09800 PF01411 tRNA synthetases class II (A) AV939_RS09800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV939_RS09815 PF05649 Peptidase family M13 AV939_RS09815 PF01431 Peptidase family M13 AV939_RS09820 PF00440 Bacterial regulatory proteins, tetR family AV939_RS09820 PF13977 BetI-type transcriptional repressor, C-terminal AV939_RS09830 PF00916 Sulfate permease family AV939_RS09830 PF01740 STAS domain AV939_RS09835 PF00484 Carbonic anhydrase AV939_RS09840 PF03466 LysR substrate binding domain AV939_RS09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS09845 PF03466 LysR substrate binding domain AV939_RS09855 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV939_RS09855 PF02310 B12 binding domain AV939_RS09855 PF02607 B12 binding domain AV939_RS09855 PF02574 Homocysteine S-methyltransferase AV939_RS09855 PF00809 Pterin binding enzyme AV939_RS09860 PF02574 Homocysteine S-methyltransferase AV939_RS09860 PF00809 Pterin binding enzyme AV939_RS09860 PF02607 B12 binding domain AV939_RS09860 PF02310 B12 binding domain AV939_RS09860 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV939_RS09865 PF04204 Homoserine O-succinyltransferase AV939_RS09875 PF01584 CheW-like domain AV939_RS09885 PF13614 AAA domain AV939_RS09890 PF01339 CheB methylesterase AV939_RS09890 PF00072 Response regulator receiver domain AV939_RS09895 PF01627 Hpt domain AV939_RS09895 PF00072 Response regulator receiver domain AV939_RS09895 PF01584 CheW-like domain AV939_RS09895 PF02895 Signal transducing histidine kinase, homodimeric domain AV939_RS09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS09900 PF04344 Chemotaxis phosphatase, CheZ AV939_RS09905 PF00072 Response regulator receiver domain AV939_RS09910 PF04545 Sigma-70, region 4 AV939_RS09910 PF04542 Sigma-70 region 2 AV939_RS09910 PF04539 Sigma-70 region 3 AV939_RS09915 PF10609 NUBPL iron-transfer P-loop NTPase AV939_RS09920 PF00448 SRP54-type protein, GTPase domain AV939_RS09925 PF00771 FHIPEP family AV939_RS09930 PF01312 FlhB HrpN YscU SpaS Family AV939_RS09935 PF01311 Bacterial export proteins, family 1 AV939_RS09940 PF01313 Bacterial export proteins, family 3 AV939_RS09945 PF00813 FliP family AV939_RS09950 PF04347 Flagellar biosynthesis protein, FliO AV939_RS09955 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV939_RS09960 PF02154 Flagellar motor switch protein FliM AV939_RS09960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV939_RS09980 PF18269 T3SS EscN ATPase C-terminal domain AV939_RS09980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV939_RS09990 PF01706 FliG C-terminal domain AV939_RS09990 PF14841 FliG middle domain AV939_RS09990 PF14842 FliG N-terminal domain AV939_RS09995 PF08345 Flagellar M-ring protein C-terminal AV939_RS09995 PF01514 Secretory protein of YscJ/FliF family AV939_RS10000 PF02049 Flagellar hook-basal body complex protein FliE AV939_RS10005 PF00072 Response regulator receiver domain AV939_RS10005 PF00158 Sigma-54 interaction domain AV939_RS10005 PF02954 Bacterial regulatory protein, Fis family AV939_RS10010 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS10010 PF13188 PAS domain AV939_RS10015 PF02954 Bacterial regulatory protein, Fis family AV939_RS10015 PF00158 Sigma-54 interaction domain AV939_RS10015 PF06490 Flagellar regulatory protein FleQ AV939_RS10020 PF08884 Flagellin D3 domain AV939_RS10020 PF00700 Bacterial flagellin C-terminal helical region AV939_RS10020 PF00669 Bacterial flagellin N-terminal helical region AV939_RS10025 PF02719 Polysaccharide biosynthesis protein AV939_RS10030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AV939_RS10035 PF02348 Cytidylyltransferase AV939_RS10045 PF08666 SAF domain AV939_RS10045 PF03102 NeuB family AV939_RS10060 PF00501 AMP-binding enzyme AV939_RS10060 PF13193 AMP-binding enzyme C-terminal domain AV939_RS10070 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AV939_RS10085 PF02348 Cytidylyltransferase AV939_RS10085 PF13472 GDSL-like Lipase/Acylhydrolase family AV939_RS10100 PF03102 NeuB family AV939_RS10100 PF08666 SAF domain AV939_RS10105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AV939_RS10110 PF16363 GDP-mannose 4,6 dehydratase AV939_RS10120 PF17102 Stealth protein CR3, conserved region 3 AV939_RS10120 PF11380 Stealth protein CR2, conserved region 2 AV939_RS10120 PF17101 Stealth protein CR1, conserved region 1 AV939_RS10135 PF02561 Flagellar protein FliS AV939_RS10140 PF07195 Flagellar hook-associated protein 2 C-terminus AV939_RS10140 PF07196 Flagellin hook IN motif AV939_RS10140 PF02465 Flagellar hook-associated protein 2 N-terminus AV939_RS10145 PF03646 FlaG protein AV939_RS10150 PF00700 Bacterial flagellin C-terminal helical region AV939_RS10150 PF07196 Flagellin hook IN motif AV939_RS10150 PF00669 Bacterial flagellin N-terminal helical region AV939_RS10155 PF07196 Flagellin hook IN motif AV939_RS10155 PF00669 Bacterial flagellin N-terminal helical region AV939_RS10155 PF00700 Bacterial flagellin C-terminal helical region AV939_RS10160 PF00700 Bacterial flagellin C-terminal helical region AV939_RS10160 PF07196 Flagellin hook IN motif AV939_RS10160 PF00669 Bacterial flagellin N-terminal helical region AV939_RS10175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV939_RS10175 PF00460 Flagella basal body rod protein AV939_RS10180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AV939_RS10180 PF10135 Rod binding protein AV939_RS10185 PF02119 Flagellar P-ring protein AV939_RS10190 PF02107 Flagellar L-ring protein AV939_RS10195 PF00460 Flagella basal body rod protein AV939_RS10195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV939_RS10200 PF00460 Flagella basal body rod protein AV939_RS10200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV939_RS10205 PF00460 Flagella basal body rod protein AV939_RS10205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV939_RS10205 PF07559 Flagellar basal body protein FlaE AV939_RS10210 PF03963 Flagellar hook capping protein - N-terminal region AV939_RS10210 PF13861 FlgD Tudor-like domain AV939_RS10210 PF13860 FlgD Ig-like domain AV939_RS10215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV939_RS10215 PF00460 Flagella basal body rod protein AV939_RS10220 PF00460 Flagella basal body rod protein AV939_RS10225 PF03705 CheR methyltransferase, all-alpha domain AV939_RS10225 PF01739 CheR methyltransferase, SAM binding domain AV939_RS10230 PF01584 CheW-like domain AV939_RS10230 PF00072 Response regulator receiver domain AV939_RS10270 PF00072 Response regulator receiver domain AV939_RS10270 PF00196 Bacterial regulatory proteins, luxR family AV939_RS10275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS10275 PF00529 HlyD membrane-fusion protein of T1SS AV939_RS10280 PF00005 ABC transporter AV939_RS10280 PF03412 Peptidase C39 family AV939_RS10280 PF00664 ABC transporter transmembrane region AV939_RS10285 PF00691 OmpA family AV939_RS10285 PF00223 Photosystem I psaA/psaB protein AV939_RS10370 PF01479 S4 domain AV939_RS10370 PF00849 RNA pseudouridylate synthase AV939_RS10380 PF00581 Rhodanese-like domain AV939_RS10380 PF17773 UPF0176 acylphosphatase like domain AV939_RS10390 PF00072 Response regulator receiver domain AV939_RS10390 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV939_RS10390 PF00989 PAS fold AV939_RS10390 PF01627 Hpt domain AV939_RS10390 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS10390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS10400 PF00365 Phosphofructokinase AV939_RS10405 PF00072 Response regulator receiver domain AV939_RS10405 PF04397 LytTr DNA-binding domain AV939_RS10410 PF07694 5TMR of 5TMR-LYT AV939_RS10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS10410 PF06580 Histidine kinase AV939_RS10430 PF01476 LysM domain AV939_RS10430 PF01551 Peptidase family M23 AV939_RS10440 PF04245 37-kD nucleoid-associated bacterial protein AV939_RS10445 PF07208 Protein of unknown function (DUF1414) AV939_RS10450 PF11893 Domain of unknown function (DUF3413) AV939_RS10450 PF00884 Sulfatase AV939_RS10455 PF08645 Polynucleotide kinase 3 phosphatase AV939_RS10460 PF13847 Methyltransferase domain AV939_RS10465 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS10470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS10470 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS10470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS10480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV939_RS10480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV939_RS10485 PF00255 Glutathione peroxidase AV939_RS10490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV939_RS10490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV939_RS10495 PF13847 Methyltransferase domain AV939_RS10500 PF01784 NIF3 (NGG1p interacting factor 3) AV939_RS10520 PF00440 Bacterial regulatory proteins, tetR family AV939_RS10525 PF08496 Peptidase family S49 N-terminal AV939_RS10525 PF01343 Peptidase family S49 AV939_RS10530 PF01804 Penicillin amidase AV939_RS10535 PF12262 Bacterial virulence factor lipase N-terminal AV939_RS10540 PF00106 short chain dehydrogenase AV939_RS10545 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AV939_RS10545 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV939_RS10550 PF00356 Bacterial regulatory proteins, lacI family AV939_RS10555 PF00686 Starch binding domain AV939_RS10555 PF00128 Alpha amylase, catalytic domain AV939_RS10565 PF09087 Cyclomaltodextrinase, N-terminal AV939_RS10565 PF00128 Alpha amylase, catalytic domain AV939_RS10565 PF10438 Cyclo-malto-dextrinase C-terminal domain AV939_RS10570 PF16657 Maltogenic Amylase, C-terminal domain AV939_RS10570 PF02903 Alpha amylase, N-terminal ig-like domain AV939_RS10570 PF00128 Alpha amylase, catalytic domain AV939_RS10585 PF01734 Patatin-like phospholipase AV939_RS10590 PF17967 Pullulanase N2 domain AV939_RS10590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV939_RS10590 PF11852 Domain of unknown function (DUF3372) AV939_RS10590 PF03714 Bacterial pullanase-associated domain AV939_RS10590 PF18494 Pullulanase Ins domain AV939_RS10600 PF04820 Tryptophan halogenase AV939_RS10610 PF00549 CoA-ligase AV939_RS10610 PF02629 CoA binding domain AV939_RS10615 PF08442 ATP-grasp domain AV939_RS10615 PF00549 CoA-ligase AV939_RS10620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV939_RS10620 PF00364 Biotin-requiring enzyme AV939_RS10620 PF02817 e3 binding domain AV939_RS10625 PF00676 Dehydrogenase E1 component AV939_RS10625 PF16870 2-oxoglutarate dehydrogenase C-terminal AV939_RS10625 PF02779 Transketolase, pyrimidine binding domain AV939_RS10625 PF16078 2-oxoglutarate dehydrogenase N-terminus AV939_RS10630 PF13085 2Fe-2S iron-sulfur cluster binding domain AV939_RS10635 PF02910 Fumarate reductase flavoprotein C-term AV939_RS10635 PF00890 FAD binding domain AV939_RS10640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV939_RS10645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV939_RS10650 PF00285 Citrate synthase, C-terminal domain AV939_RS10660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV939_RS10660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV939_RS10660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV939_RS10660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV939_RS10665 PF13409 Glutathione S-transferase, N-terminal domain AV939_RS10670 PF01266 FAD dependent oxidoreductase AV939_RS10675 PF00899 ThiF family AV939_RS10695 PF00919 Uncharacterized protein family UPF0004 AV939_RS10695 PF18693 TRAM domain AV939_RS10695 PF04055 Radical SAM superfamily AV939_RS10700 PF00106 short chain dehydrogenase AV939_RS10705 PF02348 Cytidylyltransferase AV939_RS10710 PF03966 Trm112p-like protein AV939_RS10715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AV939_RS10720 PF00664 ABC transporter transmembrane region AV939_RS10720 PF00005 ABC transporter AV939_RS10735 PF12826 Helix-hairpin-helix motif AV939_RS10735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AV939_RS10735 PF00533 BRCA1 C Terminus (BRCT) domain AV939_RS10735 PF03120 NAD-dependent DNA ligase OB-fold domain AV939_RS10735 PF01653 NAD-dependent DNA ligase adenylation domain AV939_RS10740 PF04354 ZipA, C-terminal FtsZ-binding domain AV939_RS10745 PF06470 SMC proteins Flexible Hinge Domain AV939_RS10745 PF02463 RecF/RecN/SMC N terminal domain AV939_RS10760 PF13181 Tetratricopeptide repeat AV939_RS10760 PF07719 Tetratricopeptide repeat AV939_RS10765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV939_RS10785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV939_RS10785 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS10790 PF07690 Major Facilitator Superfamily AV939_RS10810 PF05163 DinB family AV939_RS10815 PF13181 Tetratricopeptide repeat AV939_RS10825 PF02028 BCCT, betaine/carnitine/choline family transporter AV939_RS10835 PF03658 RnfH family Ubiquitin AV939_RS10840 PF03364 Polyketide cyclase / dehydrase and lipid transport AV939_RS10845 PF01668 SmpB protein AV939_RS10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS10850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV939_RS10860 PF05840 Bacteriophage replication gene A protein (GPA) AV939_RS10880 PF14659 Phage integrase, N-terminal SAM-like domain AV939_RS10880 PF00589 Phage integrase family AV939_RS10905 PF07715 TonB-dependent Receptor Plug Domain AV939_RS10905 PF00593 TonB dependent receptor AV939_RS10910 PF07690 Major Facilitator Superfamily AV939_RS10915 PF00652 Ricin-type beta-trefoil lectin domain AV939_RS10935 PF05199 GMC oxidoreductase AV939_RS10935 PF00732 GMC oxidoreductase AV939_RS10940 PF00171 Aldehyde dehydrogenase family AV939_RS10950 PF04542 Sigma-70 region 2 AV939_RS10950 PF08281 Sigma-70, region 4 AV939_RS10955 PF12146 Serine aminopeptidase, S33 AV939_RS10975 PF00593 TonB dependent receptor AV939_RS10975 PF07715 TonB-dependent Receptor Plug Domain AV939_RS10980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS10980 PF03466 LysR substrate binding domain AV939_RS11000 PF00563 EAL domain AV939_RS11000 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS11000 PF03707 Bacterial signalling protein N terminal repeat AV939_RS11015 PF00360 Phytochrome region AV939_RS11015 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS11015 PF01590 GAF domain AV939_RS11015 PF00563 EAL domain AV939_RS11030 PF01066 CDP-alcohol phosphatidyltransferase AV939_RS11035 PF00005 ABC transporter AV939_RS11040 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS11045 PF13416 Bacterial extracellular solute-binding protein AV939_RS11055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV939_RS11055 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS11060 PF00593 TonB dependent receptor AV939_RS11060 PF07715 TonB-dependent Receptor Plug Domain AV939_RS11075 PF04055 Radical SAM superfamily AV939_RS11075 PF11842 Domain of unknown function (DUF3362) AV939_RS11075 PF08497 Radical SAM N-terminal AV939_RS11100 PF00593 TonB dependent receptor AV939_RS11100 PF07715 TonB-dependent Receptor Plug Domain AV939_RS11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS11105 PF13192 Thioredoxin domain AV939_RS11110 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV939_RS11110 PF00578 AhpC/TSA family AV939_RS11135 PF00583 Acetyltransferase (GNAT) family AV939_RS11135 PF00795 Carbon-nitrogen hydrolase AV939_RS11145 PF12697 Alpha/beta hydrolase family AV939_RS11150 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS11150 PF08448 PAS fold AV939_RS11160 PF05987 Bacterial protein of unknown function (DUF898) AV939_RS11165 PF00312 Ribosomal protein S15 AV939_RS11170 PF01509 TruB family pseudouridylate synthase (N terminal domain) AV939_RS11170 PF09157 Pseudouridine synthase II TruB, C-terminal AV939_RS11170 PF16198 tRNA pseudouridylate synthase B C-terminal domain AV939_RS11175 PF02033 Ribosome-binding factor A AV939_RS11180 PF11987 Translation-initiation factor 2 AV939_RS11180 PF00009 Elongation factor Tu GTP binding domain AV939_RS11180 PF04760 Translation initiation factor IF-2, N-terminal region AV939_RS11180 PF08364 Bacterial translation initiation factor IF-2 associated region AV939_RS11185 PF00575 S1 RNA binding domain AV939_RS11185 PF13184 NusA-like KH domain AV939_RS11185 PF08529 NusA N-terminal domain AV939_RS11190 PF17384 RimP C-terminal SH3 domain AV939_RS11190 PF02576 RimP N-terminal domain AV939_RS11195 PF00072 Response regulator receiver domain AV939_RS11200 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS11200 PF00072 Response regulator receiver domain AV939_RS11200 PF01627 Hpt domain AV939_RS11215 PF01329 Pterin 4 alpha carbinolamine dehydratase AV939_RS11220 PF07715 TonB-dependent Receptor Plug Domain AV939_RS11220 PF00593 TonB dependent receptor AV939_RS11225 PF00924 Mechanosensitive ion channel AV939_RS11245 PF00924 Mechanosensitive ion channel AV939_RS11250 PF01575 MaoC like domain AV939_RS11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS11255 PF03466 LysR substrate binding domain AV939_RS11265 PF08125 Mannitol dehydrogenase C-terminal domain AV939_RS11265 PF01232 Mannitol dehydrogenase Rossmann domain AV939_RS11275 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS11280 PF04198 Putative sugar-binding domain AV939_RS11415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS11415 PF00072 Response regulator receiver domain AV939_RS11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS11415 PF00672 HAMP domain AV939_RS11415 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS11415 PF01627 Hpt domain AV939_RS11425 PF00155 Aminotransferase class I and II AV939_RS11430 PF03435 Saccharopine dehydrogenase NADP binding domain AV939_RS11445 PF00155 Aminotransferase class I and II AV939_RS11460 PF13538 UvrD-like helicase C-terminal domain AV939_RS11465 PF13361 UvrD-like helicase C-terminal domain AV939_RS11465 PF00580 UvrD/REP helicase N-terminal domain AV939_RS11465 PF12705 PD-(D/E)XK nuclease superfamily AV939_RS11470 PF17946 RecC C-terminal domain AV939_RS11480 PF00501 AMP-binding enzyme AV939_RS11485 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS11485 PF00563 EAL domain AV939_RS11485 PF03707 Bacterial signalling protein N terminal repeat AV939_RS11490 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV939_RS11490 PF12706 Beta-lactamase superfamily domain AV939_RS11490 PF17770 Ribonuclease J C-terminal domain AV939_RS11495 PF04337 Protein of unknown function, DUF480 AV939_RS11510 PF03466 LysR substrate binding domain AV939_RS11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS11530 PF01022 Bacterial regulatory protein, arsR family AV939_RS11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS11540 PF03466 LysR substrate binding domain AV939_RS11550 PF00158 Sigma-54 interaction domain AV939_RS11550 PF00072 Response regulator receiver domain AV939_RS11550 PF02954 Bacterial regulatory protein, Fis family AV939_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS11560 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS11560 PF08446 PAS fold AV939_RS11560 PF00360 Phytochrome region AV939_RS11560 PF01590 GAF domain AV939_RS11565 PF00072 Response regulator receiver domain AV939_RS11570 PF00072 Response regulator receiver domain AV939_RS11570 PF09308 LuxQ, periplasmic AV939_RS11570 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS11600 PF07043 Protein of unknown function (DUF1328) AV939_RS11620 PF07023 Protein of unknown function (DUF1315) AV939_RS11630 PF01235 Sodium:alanine symporter family AV939_RS11635 PF18027 Cytosolic carboxypeptidase N-terminal domain AV939_RS11635 PF00246 Zinc carboxypeptidase AV939_RS11640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV939_RS11640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV939_RS11650 PF01641 SelR domain AV939_RS11655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AV939_RS11655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV939_RS11660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV939_RS11660 PF00128 Alpha amylase, catalytic domain AV939_RS11665 PF00128 Alpha amylase, catalytic domain AV939_RS11665 PF02806 Alpha amylase, C-terminal all-beta domain AV939_RS11665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV939_RS11670 PF02446 4-alpha-glucanotransferase AV939_RS11675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV939_RS11675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV939_RS11680 PF01263 Aldose 1-epimerase AV939_RS11685 PF01081 KDPG and KHG aldolase AV939_RS11690 PF02685 Glucokinase AV939_RS11695 PF00920 Dehydratase family AV939_RS11700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AV939_RS11705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AV939_RS11705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AV939_RS11710 PF01380 SIS domain AV939_RS11710 PF01418 Helix-turn-helix domain, rpiR family AV939_RS11715 PF00224 Pyruvate kinase, barrel domain AV939_RS11715 PF02887 Pyruvate kinase, alpha/beta domain AV939_RS11720 PF01048 Phosphorylase superfamily AV939_RS11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS11765 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS11765 PF00672 HAMP domain AV939_RS11770 PF00486 Transcriptional regulatory protein, C terminal AV939_RS11770 PF00072 Response regulator receiver domain AV939_RS11795 PF09347 Domain of unknown function (DUF1989) AV939_RS11810 PF04962 KduI/IolB family AV939_RS11815 PF03480 Bacterial extracellular solute-binding protein, family 7 AV939_RS11825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AV939_RS11830 PF00356 Bacterial regulatory proteins, lacI family AV939_RS11835 PF08666 SAF domain AV939_RS11835 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AV939_RS11840 PF02614 Glucuronate isomerase AV939_RS11845 PF01232 Mannitol dehydrogenase Rossmann domain AV939_RS11845 PF08125 Mannitol dehydrogenase C-terminal domain AV939_RS11850 PF00294 pfkB family carbohydrate kinase AV939_RS11855 PF13472 GDSL-like Lipase/Acylhydrolase family AV939_RS11865 PF07470 Glycosyl Hydrolase Family 88 AV939_RS11870 PF00295 Glycosyl hydrolases family 28 AV939_RS11875 PF01095 Pectinesterase AV939_RS11880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS11880 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS11880 PF01627 Hpt domain AV939_RS11880 PF00672 HAMP domain AV939_RS11880 PF00072 Response regulator receiver domain AV939_RS11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS11895 PF04231 Endonuclease I AV939_RS11900 PF01433 Peptidase family M1 domain AV939_RS11900 PF11838 ERAP1-like C-terminal domain AV939_RS11905 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS11925 PF00356 Bacterial regulatory proteins, lacI family AV939_RS11930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV939_RS11930 PF13378 Enolase C-terminal domain-like AV939_RS11935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV939_RS11935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV939_RS11950 PF03707 Bacterial signalling protein N terminal repeat AV939_RS11950 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS11950 PF00563 EAL domain AV939_RS11965 PF12804 MobA-like NTP transferase domain AV939_RS11975 PF01625 Peptide methionine sulfoxide reductase AV939_RS11980 PF02566 OsmC-like protein AV939_RS11990 PF00080 Copper/zinc superoxide dismutase (SODC) AV939_RS11995 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS12005 PF00486 Transcriptional regulatory protein, C terminal AV939_RS12005 PF00072 Response regulator receiver domain AV939_RS12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS12010 PF00672 HAMP domain AV939_RS12010 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS12025 PF00881 Nitroreductase family AV939_RS12035 PF01979 Amidohydrolase family AV939_RS12040 PF01156 Inosine-uridine preferring nucleoside hydrolase AV939_RS12045 PF07690 Major Facilitator Superfamily AV939_RS12050 PF02112 cAMP phosphodiesterases class-II AV939_RS12055 PF01266 FAD dependent oxidoreductase AV939_RS12070 PF00672 HAMP domain AV939_RS12070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS12080 PF00199 Catalase AV939_RS12080 PF06628 Catalase-related immune-responsive AV939_RS12090 PF01145 SPFH domain / Band 7 family AV939_RS12110 PF00881 Nitroreductase family AV939_RS12130 PF00939 Sodium:sulfate symporter transmembrane region AV939_RS12135 PF00692 dUTPase AV939_RS12140 PF10609 NUBPL iron-transfer P-loop NTPase AV939_RS12145 PF01588 Putative tRNA binding domain AV939_RS12145 PF09334 tRNA synthetases class I (M) AV939_RS12145 PF08264 Anticodon-binding domain of tRNA AV939_RS12150 PF08241 Methyltransferase domain AV939_RS12155 PF00753 Metallo-beta-lactamase superfamily AV939_RS12155 PF16123 Hydroxyacylglutathione hydrolase C-terminus AV939_RS12160 PF01476 LysM domain AV939_RS12160 PF01464 Transglycosylase SLT domain AV939_RS12170 PF00593 TonB dependent receptor AV939_RS12170 PF07715 TonB-dependent Receptor Plug Domain AV939_RS12185 PF04041 beta-1,4-mannooligosaccharide phosphorylase AV939_RS12195 PF00356 Bacterial regulatory proteins, lacI family AV939_RS12205 PF00884 Sulfatase AV939_RS12210 PF09297 NADH pyrophosphatase zinc ribbon domain AV939_RS12210 PF00293 NUDIX domain AV939_RS12220 PF02156 Glycosyl hydrolase family 26 AV939_RS12230 PF00732 GMC oxidoreductase AV939_RS12230 PF05199 GMC oxidoreductase AV939_RS12250 PF01406 tRNA synthetases class I (C) catalytic domain AV939_RS12250 PF09190 DALR domain AV939_RS12255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV939_RS12260 PF00149 Calcineurin-like phosphoesterase AV939_RS12265 PF00245 Alkaline phosphatase AV939_RS12270 PF00245 Alkaline phosphatase AV939_RS12285 PF15975 Flotillin AV939_RS12285 PF01145 SPFH domain / Band 7 family AV939_RS12305 PF06480 FtsH Extracellular AV939_RS12305 PF17862 AAA+ lid domain AV939_RS12305 PF01434 Peptidase family M41 AV939_RS12305 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS12310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV939_RS12310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV939_RS12315 PF00941 FAD binding domain in molybdopterin dehydrogenase AV939_RS12315 PF03450 CO dehydrogenase flavoprotein C-terminal domain AV939_RS12320 PF00111 2Fe-2S iron-sulfur cluster binding domain AV939_RS12320 PF01799 [2Fe-2S] binding domain AV939_RS12325 PF07940 Heparinase II/III-like protein AV939_RS12325 PF05426 Alginate lyase AV939_RS12330 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS12330 PF00107 Zinc-binding dehydrogenase AV939_RS12340 PF04336 Acyl carrier protein phosphodiesterase AV939_RS12345 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AV939_RS12365 PF01026 TatD related DNase AV939_RS12385 PF00156 Phosphoribosyl transferase domain AV939_RS12390 PF02674 Colicin V production protein AV939_RS12395 PF05036 Sporulation related domain AV939_RS12400 PF08245 Mur ligase middle domain AV939_RS12400 PF02875 Mur ligase family, glutamate ligase domain AV939_RS12405 PF17848 Acetyl-coA carboxylase zinc finger domain AV939_RS12405 PF01039 Carboxyl transferase domain AV939_RS12410 PF01416 tRNA pseudouridine synthase AV939_RS12420 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV939_RS12420 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV939_RS12425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV939_RS12425 PF11890 Domain of unknown function (DUF3410) AV939_RS12425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV939_RS12430 PF00596 Class II Aldolase and Adducin N-terminal domain AV939_RS12440 PF00109 Beta-ketoacyl synthase, N-terminal domain AV939_RS12440 PF02801 Beta-ketoacyl synthase, C-terminal domain AV939_RS12445 PF08448 PAS fold AV939_RS12445 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS12450 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AV939_RS12450 PF01266 FAD dependent oxidoreductase AV939_RS12480 PF04315 Elongation factor P hydroxylase AV939_RS12500 PF00970 Oxidoreductase FAD-binding domain AV939_RS12500 PF00042 Globin AV939_RS12500 PF00175 Oxidoreductase NAD-binding domain AV939_RS12505 PF00487 Fatty acid desaturase AV939_RS12525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS12525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV939_RS12530 PF00378 Enoyl-CoA hydratase/isomerase AV939_RS12535 PF02909 Tetracyclin repressor-like, C-terminal domain AV939_RS12535 PF00440 Bacterial regulatory proteins, tetR family AV939_RS12540 PF00732 GMC oxidoreductase AV939_RS12540 PF05199 GMC oxidoreductase AV939_RS12550 PF06974 Protein of unknown function (DUF1298) AV939_RS12550 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AV939_RS12555 PF00440 Bacterial regulatory proteins, tetR family AV939_RS12560 PF04286 Protein of unknown function (DUF445) AV939_RS12590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AV939_RS12590 PF00326 Prolyl oligopeptidase family AV939_RS12595 PF07840 FadR C-terminal domain AV939_RS12595 PF00392 Bacterial regulatory proteins, gntR family AV939_RS12600 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AV939_RS12605 PF02600 Disulfide bond formation protein DsbB AV939_RS12610 PF13302 Acetyltransferase (GNAT) domain AV939_RS12615 PF03692 Putative zinc- or iron-chelating domain AV939_RS12620 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV939_RS12630 PF05166 YcgL domain AV939_RS12635 PF01612 3'-5' exonuclease AV939_RS12635 PF00570 HRDC domain AV939_RS12640 PF00501 AMP-binding enzyme AV939_RS12640 PF13193 AMP-binding enzyme C-terminal domain AV939_RS12645 PF12697 Alpha/beta hydrolase family AV939_RS12660 PF00814 Glycoprotease family AV939_RS12665 PF13307 Helicase C-terminal domain AV939_RS12665 PF06733 DEAD_2 AV939_RS12670 PF00128 Alpha amylase, catalytic domain AV939_RS12725 PF01634 ATP phosphoribosyltransferase AV939_RS12725 PF08029 HisG, C-terminal domain AV939_RS12730 PF00815 Histidinol dehydrogenase AV939_RS12735 PF00155 Aminotransferase class I and II AV939_RS12740 PF00475 Imidazoleglycerol-phosphate dehydratase AV939_RS12745 PF00117 Glutamine amidotransferase class-I AV939_RS12750 PF00977 Histidine biosynthesis protein AV939_RS12755 PF00977 Histidine biosynthesis protein AV939_RS12760 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AV939_RS12760 PF01502 Phosphoribosyl-AMP cyclohydrolase AV939_RS12770 PF00106 short chain dehydrogenase AV939_RS12780 PF00501 AMP-binding enzyme AV939_RS12790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AV939_RS12800 PF00535 Glycosyl transferase family 2 AV939_RS12820 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS12820 PF08521 Two-component sensor kinase N-terminal AV939_RS12820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS12825 PF00486 Transcriptional regulatory protein, C terminal AV939_RS12825 PF00072 Response regulator receiver domain AV939_RS12830 PF00753 Metallo-beta-lactamase superfamily AV939_RS12835 PF10502 Signal peptidase, peptidase S26 AV939_RS12840 PF07715 TonB-dependent Receptor Plug Domain AV939_RS12840 PF00593 TonB dependent receptor AV939_RS12850 PF05191 Adenylate kinase, active site lid AV939_RS12855 PF00183 Hsp90 protein AV939_RS12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS12860 PF02132 RecR protein AV939_RS12860 PF13662 Toprim domain AV939_RS12880 PF02575 YbaB/EbfC DNA-binding family AV939_RS12885 PF12169 DNA polymerase III subunits gamma and tau domain III AV939_RS12885 PF12170 DNA polymerase III tau subunit V interacting with alpha AV939_RS12890 PF00156 Phosphoribosyl transferase domain AV939_RS12900 PF05114 Protein of unknown function (DUF692) AV939_RS12910 PF00400 WD domain, G-beta repeat AV939_RS12910 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AV939_RS12925 PF00563 EAL domain AV939_RS12925 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS12925 PF00360 Phytochrome region AV939_RS12925 PF01590 GAF domain AV939_RS12960 PF01066 CDP-alcohol phosphatidyltransferase AV939_RS12980 PF07724 AAA domain (Cdc48 subfamily) AV939_RS12980 PF10431 C-terminal, D2-small domain, of ClpB protein AV939_RS12980 PF02861 Clp amino terminal domain, pathogenicity island component AV939_RS12980 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS12980 PF17871 AAA lid domain AV939_RS12985 PF02578 Multi-copper polyphenol oxidoreductase laccase AV939_RS12990 PF00849 RNA pseudouridylate synthase AV939_RS12990 PF01479 S4 domain AV939_RS12995 PF13525 Outer membrane lipoprotein AV939_RS13005 PF04542 Sigma-70 region 2 AV939_RS13005 PF04545 Sigma-70, region 4 AV939_RS13020 PF00106 short chain dehydrogenase AV939_RS13025 PF01593 Flavin containing amine oxidoreductase AV939_RS13040 PF00691 OmpA family AV939_RS13040 PF13677 Membrane MotB of proton-channel complex MotA/MotB AV939_RS13045 PF01618 MotA/TolQ/ExbB proton channel family AV939_RS13050 PF02609 Exonuclease VII small subunit AV939_RS13055 PF00348 Polyprenyl synthetase AV939_RS13060 PF02779 Transketolase, pyrimidine binding domain AV939_RS13060 PF02780 Transketolase, C-terminal domain AV939_RS13060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AV939_RS13065 PF04608 Phosphatidylglycerophosphatase A AV939_RS13070 PF02769 AIR synthase related protein, C-terminal domain AV939_RS13070 PF00586 AIR synthase related protein, N-terminal domain AV939_RS13075 PF01029 NusB family AV939_RS13080 PF00885 6,7-dimethyl-8-ribityllumazine synthase AV939_RS13085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AV939_RS13085 PF00925 GTP cyclohydrolase II AV939_RS13090 PF00677 Lumazine binding domain AV939_RS13095 PF01872 RibD C-terminal domain AV939_RS13095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV939_RS13100 PF03477 ATP cone domain AV939_RS13105 PF00464 Serine hydroxymethyltransferase AV939_RS13110 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS13110 PF14602 Hexapeptide repeat of succinyl-transferase AV939_RS13110 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AV939_RS13115 PF12848 ABC transporter AV939_RS13115 PF00005 ABC transporter AV939_RS13125 PF18073 Rubredoxin metal binding domain AV939_RS13135 PF18429 Domain of unknown function (DUF5609) AV939_RS13145 PF01026 TatD related DNase AV939_RS13150 PF01243 Pyridoxamine 5'-phosphate oxidase AV939_RS13150 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AV939_RS13155 PF01926 50S ribosome-binding GTPase AV939_RS13155 PF07650 KH domain AV939_RS13160 PF00035 Double-stranded RNA binding motif AV939_RS13160 PF14622 Ribonuclease-III-like AV939_RS13165 PF10502 Signal peptidase, peptidase S26 AV939_RS13170 PF00679 Elongation factor G C-terminus AV939_RS13170 PF00009 Elongation factor Tu GTP binding domain AV939_RS13170 PF06421 GTP-binding protein LepA C-terminus AV939_RS13170 PF03144 Elongation factor Tu domain 2 AV939_RS13180 PF03888 MucB/RseB N-terminal domain AV939_RS13180 PF17188 MucB/RseB C-terminal domain AV939_RS13190 PF08281 Sigma-70, region 4 AV939_RS13190 PF04542 Sigma-70 region 2 AV939_RS13195 PF02910 Fumarate reductase flavoprotein C-term AV939_RS13195 PF00890 FAD binding domain AV939_RS13210 PF03937 Flavinator of succinate dehydrogenase AV939_RS13220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV939_RS13225 PF00543 Nitrogen regulatory protein P-II AV939_RS13230 PF02540 NAD synthase AV939_RS13240 PF00114 Pilin (bacterial filament) AV939_RS13240 PF07963 Prokaryotic N-terminal methylation motif AV939_RS13290 PF02401 LytB protein AV939_RS13295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV939_RS13300 PF01252 Signal peptidase (SPase) II AV939_RS13305 PF00133 tRNA synthetases class I (I, L, M and V) AV939_RS13305 PF06827 Zinc finger found in FPG and IleRS AV939_RS13305 PF08264 Anticodon-binding domain of tRNA AV939_RS13310 PF01687 Riboflavin kinase AV939_RS13310 PF06574 FAD synthetase AV939_RS13315 PF03023 Lipid II flippase MurJ AV939_RS13320 PF01649 Ribosomal protein S20 AV939_RS13325 PF00106 short chain dehydrogenase AV939_RS13335 PF00106 short chain dehydrogenase AV939_RS13340 PF01758 Sodium Bile acid symporter family AV939_RS13345 PF03466 LysR substrate binding domain AV939_RS13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS13360 PF07687 Peptidase dimerisation domain AV939_RS13360 PF01546 Peptidase family M20/M25/M40 AV939_RS13370 PF00216 Bacterial DNA-binding protein AV939_RS13375 PF05362 Lon protease (S16) C-terminal proteolytic domain AV939_RS13375 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS13375 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV939_RS13380 PF10431 C-terminal, D2-small domain, of ClpB protein AV939_RS13380 PF06689 ClpX C4-type zinc finger AV939_RS13380 PF07724 AAA domain (Cdc48 subfamily) AV939_RS13385 PF00574 Clp protease AV939_RS13390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV939_RS13390 PF05698 Bacterial trigger factor protein (TF) C-terminus AV939_RS13390 PF05697 Bacterial trigger factor protein (TF) AV939_RS13420 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AV939_RS13420 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AV939_RS13430 PF18389 TrmO C-terminal domain AV939_RS13430 PF01980 tRNA-methyltransferase O AV939_RS13435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV939_RS13435 PF03129 Anticodon binding domain AV939_RS13445 PF02253 Phospholipase A1 AV939_RS13450 PF00850 Histone deacetylase domain AV939_RS13455 PF00672 HAMP domain AV939_RS13455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS13455 PF02743 Cache domain AV939_RS13460 PF01757 Acyltransferase family AV939_RS13465 PF00958 GMP synthase C terminal domain AV939_RS13465 PF00117 Glutamine amidotransferase class-I AV939_RS13465 PF02540 NAD synthase AV939_RS13470 PF00478 IMP dehydrogenase / GMP reductase domain AV939_RS13470 PF00571 CBS domain AV939_RS13475 PF02601 Exonuclease VII, large subunit AV939_RS13475 PF13742 OB-fold nucleic acid binding domain AV939_RS13485 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AV939_RS13485 PF01926 50S ribosome-binding GTPase AV939_RS13490 PF13360 PQQ-like domain AV939_RS13495 PF09976 Tetratricopeptide repeat-like domain AV939_RS13500 PF03129 Anticodon binding domain AV939_RS13500 PF13393 Histidyl-tRNA synthetase AV939_RS13505 PF04551 GcpE protein AV939_RS13510 PF13464 Domain of unknown function (DUF4115) AV939_RS13520 PF04055 Radical SAM superfamily AV939_RS13525 PF00334 Nucleoside diphosphate kinase AV939_RS13530 PF02657 Fe-S metabolism associated domain AV939_RS13535 PF01883 Iron-sulfur cluster assembly protein AV939_RS13540 PF01521 Iron-sulphur cluster biosynthesis AV939_RS13545 PF00266 Aminotransferase class-V AV939_RS13550 PF01458 Uncharacterized protein family (UPF0051) AV939_RS13555 PF00005 ABC transporter AV939_RS13560 PF01458 Uncharacterized protein family (UPF0051) AV939_RS13565 PF00266 Aminotransferase class-V AV939_RS13570 PF02082 Transcriptional regulator AV939_RS13575 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS13580 PF00588 SpoU rRNA Methylase family AV939_RS13585 PF00459 Inositol monophosphatase family AV939_RS13600 PF03707 Bacterial signalling protein N terminal repeat AV939_RS13600 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS13600 PF00563 EAL domain AV939_RS13615 PF02355 Protein export membrane protein AV939_RS13615 PF07549 SecD/SecF GG Motif AV939_RS13620 PF07549 SecD/SecF GG Motif AV939_RS13620 PF13721 SecD export protein N-terminal TM region AV939_RS13620 PF02355 Protein export membrane protein AV939_RS13625 PF02699 Preprotein translocase subunit AV939_RS13630 PF01702 Queuine tRNA-ribosyltransferase AV939_RS13635 PF02547 Queuosine biosynthesis protein AV939_RS13645 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AV939_RS13650 PF04012 PspA/IM30 family AV939_RS13675 PF03738 Glutathionylspermidine synthase preATP-grasp AV939_RS13690 PF04960 Glutaminase AV939_RS13695 PF00245 Alkaline phosphatase AV939_RS13700 PF00072 Response regulator receiver domain AV939_RS13705 PF00463 Isocitrate lyase family AV939_RS13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS13710 PF03466 LysR substrate binding domain AV939_RS13715 PF01274 Malate synthase AV939_RS13725 PF01370 NAD dependent epimerase/dehydratase family AV939_RS13750 PF00899 ThiF family AV939_RS13755 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS13760 PF03552 Cellulose synthase AV939_RS13760 PF03170 Bacterial cellulose synthase subunit AV939_RS13760 PF07238 PilZ domain AV939_RS13760 PF00535 Glycosyl transferase family 2 AV939_RS13775 PF00534 Glycosyl transferases group 1 AV939_RS13775 PF13439 Glycosyltransferase Family 4 AV939_RS13780 PF00534 Glycosyl transferases group 1 AV939_RS13780 PF13439 Glycosyltransferase Family 4 AV939_RS13825 PF00535 Glycosyl transferase family 2 AV939_RS13845 PF02397 Bacterial sugar transferase AV939_RS13860 PF13614 AAA domain AV939_RS13870 PF13401 AAA domain AV939_RS13870 PF01471 Putative peptidoglycan binding domain AV939_RS13875 PF01467 Cytidylyltransferase-like AV939_RS13875 PF00294 pfkB family carbohydrate kinase AV939_RS13880 PF01541 GIY-YIG catalytic domain AV939_RS13890 PF03710 Glutamate-ammonia ligase adenylyltransferase AV939_RS13890 PF08335 GlnD PII-uridylyltransferase AV939_RS13900 PF03279 Bacterial lipid A biosynthesis acyltransferase AV939_RS13930 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS13930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS13930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV939_RS13930 PF09317 Domain of unknown function (DUF1974) AV939_RS13940 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS13940 PF00563 EAL domain AV939_RS13940 PF03707 Bacterial signalling protein N terminal repeat AV939_RS13945 PF00265 Thymidine kinase AV939_RS13955 PF00356 Bacterial regulatory proteins, lacI family AV939_RS14000 PF01926 50S ribosome-binding GTPase AV939_RS14005 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV939_RS14005 PF00588 SpoU rRNA Methylase family AV939_RS14010 PF11953 Domain of unknown function (DUF3470) AV939_RS14010 PF00037 4Fe-4S binding domain AV939_RS14040 PF03793 PASTA domain AV939_RS14040 PF00069 Protein kinase domain AV939_RS14050 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AV939_RS14050 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AV939_RS14050 PF01276 Orn/Lys/Arg decarboxylase, major domain AV939_RS14075 PF00593 TonB dependent receptor AV939_RS14075 PF07715 TonB-dependent Receptor Plug Domain AV939_RS14085 PF07715 TonB-dependent Receptor Plug Domain AV939_RS14085 PF07660 Secretin and TonB N terminus short domain AV939_RS14085 PF00593 TonB dependent receptor AV939_RS14105 PF07715 TonB-dependent Receptor Plug Domain AV939_RS14110 PF05360 yiaA/B two helix domain AV939_RS14125 PF05971 RNA methyltransferase AV939_RS14130 PF00376 MerR family regulatory protein AV939_RS14130 PF09278 MerR, DNA binding AV939_RS14145 PF18030 RimK PreATP-grasp domain AV939_RS14145 PF08443 RimK-like ATP-grasp domain AV939_RS14155 PF00246 Zinc carboxypeptidase AV939_RS14160 PF00483 Nucleotidyl transferase AV939_RS14200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV939_RS14200 PF18158 Adaptive response protein AidB N-terminal domain AV939_RS14200 PF02770 Acyl-CoA dehydrogenase, middle domain AV939_RS14210 PF01244 Membrane dipeptidase (Peptidase family M19) AV939_RS14215 PF07660 Secretin and TonB N terminus short domain AV939_RS14215 PF07715 TonB-dependent Receptor Plug Domain AV939_RS14215 PF00593 TonB dependent receptor AV939_RS14225 PF01738 Dienelactone hydrolase family AV939_RS14230 PF00578 AhpC/TSA family AV939_RS14240 PF03969 AFG1-like ATPase AV939_RS14265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV939_RS14275 PF00881 Nitroreductase family AV939_RS14280 PF12633 Adenylate cyclase NT domain AV939_RS14280 PF01295 Adenylate cyclase, class-I AV939_RS14290 PF03061 Thioesterase superfamily AV939_RS14295 PF12392 Collagenase AV939_RS14295 PF01136 Peptidase family U32 AV939_RS14330 PF00128 Alpha amylase, catalytic domain AV939_RS14335 PF07690 Major Facilitator Superfamily AV939_RS14350 PF00266 Aminotransferase class-V AV939_RS14360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS14360 PF03466 LysR substrate binding domain AV939_RS14370 PF01593 Flavin containing amine oxidoreductase AV939_RS14380 PF01638 HxlR-like helix-turn-helix AV939_RS14385 PF03965 Penicillinase repressor AV939_RS14395 PF01258 Prokaryotic dksA/traR C4-type zinc finger AV939_RS14400 PF11838 ERAP1-like C-terminal domain AV939_RS14400 PF01433 Peptidase family M1 domain AV939_RS14440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV939_RS14440 PF06481 COX Aromatic Rich Motif AV939_RS14445 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV939_RS14450 PF00510 Cytochrome c oxidase subunit III AV939_RS14455 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AV939_RS14460 PF01040 UbiA prenyltransferase family AV939_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS14475 PF03466 LysR substrate binding domain AV939_RS14485 PF03466 LysR substrate binding domain AV939_RS14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS14490 PF00106 short chain dehydrogenase AV939_RS14495 PF01965 DJ-1/PfpI family AV939_RS14505 PF00743 Flavin-binding monooxygenase-like AV939_RS14510 PF00561 alpha/beta hydrolase fold AV939_RS14520 PF00873 AcrB/AcrD/AcrF family AV939_RS14540 PF16916 Dimerisation domain of Zinc Transporter AV939_RS14540 PF01545 Cation efflux family AV939_RS14550 PF01545 Cation efflux family AV939_RS14555 PF13411 MerR HTH family regulatory protein AV939_RS14580 PF00694 Aconitase C-terminal domain AV939_RS14585 PF00330 Aconitase family (aconitate hydratase) AV939_RS14590 PF00857 Isochorismatase family AV939_RS14595 PF02538 Hydantoinase B/oxoprolinase AV939_RS14600 PF01968 Hydantoinase/oxoprolinase AV939_RS14600 PF05378 Hydantoinase/oxoprolinase N-terminal region AV939_RS14605 PF00682 HMGL-like AV939_RS14610 PF02515 CoA-transferase family III AV939_RS14615 PF07715 TonB-dependent Receptor Plug Domain AV939_RS14615 PF00593 TonB dependent receptor AV939_RS14620 PF00158 Sigma-54 interaction domain AV939_RS14620 PF02954 Bacterial regulatory protein, Fis family AV939_RS14620 PF06506 Propionate catabolism activator AV939_RS14630 PF00593 TonB dependent receptor AV939_RS14630 PF07715 TonB-dependent Receptor Plug Domain AV939_RS14650 PF13533 Biotin-lipoyl like AV939_RS14655 PF01047 MarR family AV939_RS14660 PF17755 UvrA DNA-binding domain AV939_RS14665 PF03631 Virulence factor BrkB AV939_RS14675 PF09382 RQC domain AV939_RS14675 PF16124 RecQ zinc-binding AV939_RS14675 PF00570 HRDC domain AV939_RS14675 PF00271 Helicase conserved C-terminal domain AV939_RS14675 PF00270 DEAD/DEAH box helicase AV939_RS14680 PF07152 YaeQ protein AV939_RS14700 PF03466 LysR substrate binding domain AV939_RS14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS14710 PF00226 DnaJ domain AV939_RS14710 PF01556 DnaJ C terminal domain AV939_RS14715 PF00175 Oxidoreductase NAD-binding domain AV939_RS14715 PF00970 Oxidoreductase FAD-binding domain AV939_RS14715 PF00042 Globin AV939_RS14730 PF01590 GAF domain AV939_RS14730 PF00158 Sigma-54 interaction domain AV939_RS14755 PF00400 WD domain, G-beta repeat AV939_RS14755 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AV939_RS14770 PF00155 Aminotransferase class I and II AV939_RS14770 PF00392 Bacterial regulatory proteins, gntR family AV939_RS14790 PF01863 Protein of unknown function DUF45 AV939_RS14805 PF02810 SEC-C motif AV939_RS14805 PF07516 SecA Wing and Scaffold domain AV939_RS14805 PF01043 SecA preprotein cross-linking domain AV939_RS14805 PF07517 SecA DEAD-like domain AV939_RS14820 PF03553 Na+/H+ antiporter family AV939_RS14840 PF07995 Glucose / Sorbosone dehydrogenase AV939_RS14845 PF12833 Helix-turn-helix domain AV939_RS14845 PF12852 Cupin AV939_RS14850 PF00892 EamA-like transporter family AV939_RS14855 PF06906 Protein of unknown function (DUF1272) AV939_RS14860 PF00270 DEAD/DEAH box helicase AV939_RS14860 PF00271 Helicase conserved C-terminal domain AV939_RS14910 PF07690 Major Facilitator Superfamily AV939_RS14920 PF00248 Aldo/keto reductase family AV939_RS14935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV939_RS14935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV939_RS14975 PF13276 HTH-like domain AV939_RS14975 PF13333 Integrase core domain AV939_RS14975 PF00665 Integrase core domain AV939_RS15000 PF02347 Glycine cleavage system P-protein AV939_RS15005 PF01597 Glycine cleavage H-protein AV939_RS15010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AV939_RS15010 PF01571 Aminomethyltransferase folate-binding domain AV939_RS15015 PF03466 LysR substrate binding domain AV939_RS15015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS15025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AV939_RS15025 PF00356 Bacterial regulatory proteins, lacI family AV939_RS15030 PF01306 LacY proton/sugar symporter AV939_RS15035 PF00251 Glycosyl hydrolases family 32 N-terminal domain AV939_RS15035 PF08244 Glycosyl hydrolases family 32 C terminal AV939_RS15040 PF00083 Sugar (and other) transporter AV939_RS15050 PF00593 TonB dependent receptor AV939_RS15050 PF07715 TonB-dependent Receptor Plug Domain AV939_RS15055 PF03150 Di-haem cytochrome c peroxidase AV939_RS15060 PF01321 Creatinase/Prolidase N-terminal domain AV939_RS15060 PF00557 Metallopeptidase family M24 AV939_RS15075 PF01494 FAD binding domain AV939_RS15080 PF01494 FAD binding domain AV939_RS15085 PF00557 Metallopeptidase family M24 AV939_RS15085 PF05195 Aminopeptidase P, N-terminal domain AV939_RS15090 PF03695 Uncharacterised protein family (UPF0149) AV939_RS15100 PF00294 pfkB family carbohydrate kinase AV939_RS15105 PF01156 Inosine-uridine preferring nucleoside hydrolase AV939_RS15110 PF13188 PAS domain AV939_RS15110 PF00989 PAS fold AV939_RS15110 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS15115 PF01812 5-formyltetrahydrofolate cyclo-ligase family AV939_RS15120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AV939_RS15125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV939_RS15125 PF01842 ACT domain AV939_RS15125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV939_RS15145 PF06945 Protein of unknown function (DUF1289) AV939_RS15165 PF00873 AcrB/AcrD/AcrF family AV939_RS15170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS15175 PF03466 LysR substrate binding domain AV939_RS15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS15185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS15185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV939_RS15190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV939_RS15190 PF00364 Biotin-requiring enzyme AV939_RS15190 PF02817 e3 binding domain AV939_RS15195 PF17831 Pyruvate dehydrogenase E1 component middle domain AV939_RS15195 PF00456 Transketolase, thiamine diphosphate binding domain AV939_RS15200 PF00392 Bacterial regulatory proteins, gntR family AV939_RS15200 PF07729 FCD domain AV939_RS15210 PF01510 N-acetylmuramoyl-L-alanine amidase AV939_RS15220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AV939_RS15220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AV939_RS15225 PF07963 Prokaryotic N-terminal methylation motif AV939_RS15230 PF00482 Type II secretion system (T2SS), protein F AV939_RS15235 PF01478 Type IV leader peptidase family AV939_RS15235 PF06750 Bacterial Peptidase A24 N-terminal domain AV939_RS15240 PF01121 Dephospho-CoA kinase AV939_RS15245 PF07072 Cell division protein AV939_RS15250 PF03884 DNA gyrase inhibitor YacG AV939_RS15255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AV939_RS15260 PF00293 NUDIX domain AV939_RS15265 PF01043 SecA preprotein cross-linking domain AV939_RS15265 PF02810 SEC-C motif AV939_RS15265 PF07516 SecA Wing and Scaffold domain AV939_RS15265 PF07517 SecA DEAD-like domain AV939_RS15270 PF01476 LysM domain AV939_RS15270 PF08525 Opacity-associated protein A N-terminal motif AV939_RS15270 PF01551 Peptidase family M23 AV939_RS15275 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AV939_RS15280 PF12327 FtsZ family, C-terminal domain AV939_RS15280 PF00091 Tubulin/FtsZ family, GTPase domain AV939_RS15285 PF02491 SHS2 domain inserted in FTSA AV939_RS15290 PF03799 Cell division protein FtsQ AV939_RS15290 PF08478 POTRA domain, FtsQ-type AV939_RS15295 PF01820 D-ala D-ala ligase N-terminus AV939_RS15295 PF07478 D-ala D-ala ligase C-terminus AV939_RS15300 PF01225 Mur ligase family, catalytic domain AV939_RS15300 PF08245 Mur ligase middle domain AV939_RS15300 PF02875 Mur ligase family, glutamate ligase domain AV939_RS15305 PF04101 Glycosyltransferase family 28 C-terminal domain AV939_RS15305 PF03033 Glycosyltransferase family 28 N-terminal domain AV939_RS15310 PF01098 Cell cycle protein AV939_RS15315 PF02875 Mur ligase family, glutamate ligase domain AV939_RS15315 PF08245 Mur ligase middle domain AV939_RS15320 PF00953 Glycosyl transferase family 4 AV939_RS15320 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AV939_RS15325 PF08245 Mur ligase middle domain AV939_RS15325 PF01225 Mur ligase family, catalytic domain AV939_RS15325 PF02875 Mur ligase family, glutamate ligase domain AV939_RS15330 PF01225 Mur ligase family, catalytic domain AV939_RS15330 PF02875 Mur ligase family, glutamate ligase domain AV939_RS15330 PF08245 Mur ligase middle domain AV939_RS15335 PF00905 Penicillin binding protein transpeptidase domain AV939_RS15335 PF03717 Penicillin-binding Protein dimerisation domain AV939_RS15340 PF04999 Cell division protein FtsL AV939_RS15345 PF01795 MraW methylase family AV939_RS15350 PF02381 MraZ protein, putative antitoxin-like AV939_RS15360 PF01244 Membrane dipeptidase (Peptidase family M19) AV939_RS15365 PF00873 AcrB/AcrD/AcrF family AV939_RS15370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV939_RS15390 PF00462 Glutaredoxin AV939_RS15390 PF08534 Redoxin AV939_RS15395 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS15405 PF00158 Sigma-54 interaction domain AV939_RS15405 PF02954 Bacterial regulatory protein, Fis family AV939_RS15405 PF00072 Response regulator receiver domain AV939_RS15410 PF00072 Response regulator receiver domain AV939_RS15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS15410 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS15410 PF01627 Hpt domain AV939_RS15410 PF00989 PAS fold AV939_RS15410 PF18415 Histidine kinase receptor ArcB trans-membrane domain AV939_RS15415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV939_RS15415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV939_RS15430 PF05552 Conserved TM helix AV939_RS15430 PF00924 Mechanosensitive ion channel AV939_RS15435 PF04452 RNA methyltransferase AV939_RS15440 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AV939_RS15440 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AV939_RS15445 PF02622 Uncharacterized ACR, COG1678 AV939_RS15450 PF03652 Holliday junction resolvase AV939_RS15460 PF00437 Type II/IV secretion system protein AV939_RS15465 PF00437 Type II/IV secretion system protein AV939_RS15470 PF01168 Alanine racemase, N-terminal domain AV939_RS15475 PF03807 NADP oxidoreductase coenzyme F420-dependent AV939_RS15475 PF14748 Pyrroline-5-carboxylate reductase dimerisation AV939_RS15480 PF02325 YGGT family AV939_RS15495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV939_RS15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS15505 PF08787 Alginate lyase AV939_RS15510 PF01588 Putative tRNA binding domain AV939_RS15515 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS15515 PF00043 Glutathione S-transferase, C-terminal domain AV939_RS15520 PF03883 Peroxide stress protein YaaA AV939_RS15525 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV939_RS15530 PF00342 Phosphoglucose isomerase AV939_RS15535 PF03167 Uracil DNA glycosylase superfamily AV939_RS15540 PF00291 Pyridoxal-phosphate dependent enzyme AV939_RS15540 PF14821 Threonine synthase N terminus AV939_RS15545 PF00288 GHMP kinases N terminal domain AV939_RS15545 PF08544 GHMP kinases C terminal AV939_RS15550 PF03447 Homoserine dehydrogenase, NAD binding domain AV939_RS15550 PF00742 Homoserine dehydrogenase AV939_RS15550 PF13840 ACT domain AV939_RS15550 PF01842 ACT domain AV939_RS15550 PF00696 Amino acid kinase family AV939_RS15555 PF03466 LysR substrate binding domain AV939_RS15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS15560 PF08240 Alcohol dehydrogenase GroES-like domain AV939_RS15560 PF00107 Zinc-binding dehydrogenase AV939_RS15565 PF00196 Bacterial regulatory proteins, luxR family AV939_RS15565 PF00072 Response regulator receiver domain AV939_RS15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS15570 PF07730 Histidine kinase AV939_RS15590 PF01022 Bacterial regulatory protein, arsR family AV939_RS15600 PF03358 NADPH-dependent FMN reductase AV939_RS15605 PF01758 Sodium Bile acid symporter family AV939_RS15610 PF00072 Response regulator receiver domain AV939_RS15615 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AV939_RS15620 PF00486 Transcriptional regulatory protein, C terminal AV939_RS15620 PF00072 Response regulator receiver domain AV939_RS15625 PF16736 Single Cache-like AV939_RS15625 PF00989 PAS fold AV939_RS15625 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS15650 PF16653 Saccharopine dehydrogenase C-terminal domain AV939_RS15650 PF03435 Saccharopine dehydrogenase NADP binding domain AV939_RS15655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AV939_RS15665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV939_RS15670 PF04348 LppC putative lipoprotein AV939_RS15675 PF02021 Uncharacterised protein family UPF0102 AV939_RS15680 PF13580 SIS domain AV939_RS15685 PF04972 BON domain AV939_RS15690 PF07690 Major Facilitator Superfamily AV939_RS15725 PF00893 Small Multidrug Resistance protein AV939_RS15730 PF07730 Histidine kinase AV939_RS15735 PF00072 Response regulator receiver domain AV939_RS15735 PF00196 Bacterial regulatory proteins, luxR family AV939_RS15740 PF00593 TonB dependent receptor AV939_RS15740 PF07715 TonB-dependent Receptor Plug Domain AV939_RS15755 PF00285 Citrate synthase, C-terminal domain AV939_RS15760 PF00330 Aconitase family (aconitate hydratase) AV939_RS15760 PF00694 Aconitase C-terminal domain AV939_RS15765 PF04303 PrpF protein AV939_RS15770 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS15780 PF05161 MOFRL family AV939_RS15780 PF13660 Domain of unknown function (DUF4147) AV939_RS15785 PF00474 Sodium:solute symporter family AV939_RS15790 PF00593 TonB dependent receptor AV939_RS15790 PF07715 TonB-dependent Receptor Plug Domain AV939_RS15815 PF18415 Histidine kinase receptor ArcB trans-membrane domain AV939_RS15815 PF01627 Hpt domain AV939_RS15815 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS15815 PF00989 PAS fold AV939_RS15815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS15815 PF00072 Response regulator receiver domain AV939_RS15820 PF01493 GXGXG motif AV939_RS15820 PF01645 Conserved region in glutamate synthase AV939_RS15820 PF04898 Glutamate synthase central domain AV939_RS15820 PF00310 Glutamine amidotransferases class-II AV939_RS15825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AV939_RS15825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS15835 PF01381 Helix-turn-helix AV939_RS15840 PF00544 Pectate lyase AV939_RS15860 PF00544 Pectate lyase AV939_RS15875 PF01048 Phosphorylase superfamily AV939_RS15885 PF01497 Periplasmic binding protein AV939_RS15890 PF00581 Rhodanese-like domain AV939_RS15905 PF00579 tRNA synthetases class I (W and Y) AV939_RS15910 PF04225 Opacity-associated protein A LysM-like domain AV939_RS15910 PF01551 Peptidase family M23 AV939_RS15915 PF03702 Anhydro-N-acetylmuramic acid kinase AV939_RS15925 PF07690 Major Facilitator Superfamily AV939_RS15930 PF04966 Carbohydrate-selective porin, OprB family AV939_RS15935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV939_RS15945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV939_RS15950 PF13417 Glutathione S-transferase, N-terminal domain AV939_RS15950 PF00043 Glutathione S-transferase, C-terminal domain AV939_RS15955 PF01521 Iron-sulphur cluster biosynthesis AV939_RS15960 PF03976 Polyphosphate kinase 2 (PPK2) AV939_RS15965 PF03776 Septum formation topological specificity factor MinE AV939_RS15970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AV939_RS15975 PF05209 Septum formation inhibitor MinC, N-terminal domain AV939_RS15975 PF03775 Septum formation inhibitor MinC, C-terminal domain AV939_RS15980 PF10415 Fumarase C C-terminus AV939_RS15980 PF00206 Lyase AV939_RS16000 PF03653 Uncharacterised protein family (UPF0093) AV939_RS16015 PF01566 Natural resistance-associated macrophage protein AV939_RS16020 PF00155 Aminotransferase class I and II AV939_RS16025 PF08448 PAS fold AV939_RS16025 PF00072 Response regulator receiver domain AV939_RS16025 PF13188 PAS domain AV939_RS16025 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS16035 PF00679 Elongation factor G C-terminus AV939_RS16035 PF03144 Elongation factor Tu domain 2 AV939_RS16035 PF00009 Elongation factor Tu GTP binding domain AV939_RS16040 PF00120 Glutamine synthetase, catalytic domain AV939_RS16040 PF03951 Glutamine synthetase, beta-Grasp domain AV939_RS16050 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS16050 PF00989 PAS fold AV939_RS16055 PF02954 Bacterial regulatory protein, Fis family AV939_RS16055 PF00158 Sigma-54 interaction domain AV939_RS16055 PF00072 Response regulator receiver domain AV939_RS16060 PF00072 Response regulator receiver domain AV939_RS16065 PF01553 Acyltransferase AV939_RS16070 PF06877 Regulator of ribonuclease activity B AV939_RS16080 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS16080 PF17158 Membrane-associated sensor, integral membrane domain AV939_RS16090 PF00672 HAMP domain AV939_RS16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS16090 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS16090 PF00072 Response regulator receiver domain AV939_RS16090 PF01627 Hpt domain AV939_RS16090 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV939_RS16095 PF08264 Anticodon-binding domain of tRNA AV939_RS16095 PF10458 Valyl tRNA synthetase tRNA binding arm AV939_RS16095 PF00133 tRNA synthetases class I (I, L, M and V) AV939_RS16100 PF04364 DNA polymerase III chi subunit, HolC AV939_RS16105 PF00883 Cytosol aminopeptidase family, catalytic domain AV939_RS16105 PF02789 Cytosol aminopeptidase family, N-terminal domain AV939_RS16110 PF03739 Lipopolysaccharide export system permease LptF/LptG AV939_RS16115 PF03739 Lipopolysaccharide export system permease LptF/LptG AV939_RS16125 PF04542 Sigma-70 region 2 AV939_RS16125 PF04545 Sigma-70, region 4 AV939_RS16160 PF04183 IucA / IucC family AV939_RS16160 PF06276 Ferric iron reductase FhuF-like transporter AV939_RS16165 PF04183 IucA / IucC family AV939_RS16165 PF06276 Ferric iron reductase FhuF-like transporter AV939_RS16170 PF00501 AMP-binding enzyme AV939_RS16170 PF13193 AMP-binding enzyme C-terminal domain AV939_RS16180 PF01261 Xylose isomerase-like TIM barrel AV939_RS16195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV939_RS16195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV939_RS16240 PF05736 OprF membrane domain AV939_RS16240 PF00691 OmpA family AV939_RS16260 PF00563 EAL domain AV939_RS16260 PF03707 Bacterial signalling protein N terminal repeat AV939_RS16260 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS16265 PF05221 S-adenosyl-L-homocysteine hydrolase AV939_RS16265 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AV939_RS16320 PF01321 Creatinase/Prolidase N-terminal domain AV939_RS16320 PF00557 Metallopeptidase family M24 AV939_RS16325 PF08448 PAS fold AV939_RS16325 PF00072 Response regulator receiver domain AV939_RS16325 PF13188 PAS domain AV939_RS16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS16325 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS16335 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS16340 PF00005 ABC transporter AV939_RS16340 PF08402 TOBE domain AV939_RS16345 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS16350 PF00528 Binding-protein-dependent transport system inner membrane component AV939_RS16365 PF05230 MASE2 domain AV939_RS16365 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS16370 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS16375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV939_RS16380 PF01011 PQQ enzyme repeat AV939_RS16380 PF13360 PQQ-like domain AV939_RS16400 PF00005 ABC transporter AV939_RS16410 PF00883 Cytosol aminopeptidase family, catalytic domain AV939_RS16410 PF02789 Cytosol aminopeptidase family, N-terminal domain AV939_RS16415 PF12706 Beta-lactamase superfamily domain AV939_RS16420 PF03070 TENA/THI-4/PQQC family AV939_RS16425 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AV939_RS16430 PF04055 Radical SAM superfamily AV939_RS16430 PF13186 Iron-sulfur cluster-binding domain AV939_RS16455 PF00072 Response regulator receiver domain AV939_RS16455 PF00196 Bacterial regulatory proteins, luxR family AV939_RS16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS16460 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS16460 PF09456 RcsC Alpha-Beta-Loop (ABL) AV939_RS16460 PF00072 Response regulator receiver domain AV939_RS16470 PF12801 4Fe-4S binding domain AV939_RS16470 PF04205 FMN-binding domain AV939_RS16475 PF00171 Aldehyde dehydrogenase family AV939_RS16480 PF00072 Response regulator receiver domain AV939_RS16480 PF00196 Bacterial regulatory proteins, luxR family AV939_RS16485 PF07730 Histidine kinase AV939_RS16490 PF00561 alpha/beta hydrolase fold AV939_RS16495 PF07729 FCD domain AV939_RS16495 PF00392 Bacterial regulatory proteins, gntR family AV939_RS16500 PF08787 Alginate lyase AV939_RS16515 PF07715 TonB-dependent Receptor Plug Domain AV939_RS16520 PF03150 Di-haem cytochrome c peroxidase AV939_RS16535 PF08787 Alginate lyase AV939_RS16540 PF07690 Major Facilitator Superfamily AV939_RS16545 PF14592 Chondroitinase B AV939_RS16555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV939_RS16555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV939_RS16560 PF07883 Cupin domain AV939_RS16565 PF07690 Major Facilitator Superfamily AV939_RS16585 PF12773 Double zinc ribbon AV939_RS16585 PF00498 FHA domain AV939_RS16620 PF00069 Protein kinase domain AV939_RS16620 PF00805 Pentapeptide repeats (8 copies) AV939_RS16625 PF02868 Thermolysin metallopeptidase, alpha-helical domain AV939_RS16625 PF01447 Thermolysin metallopeptidase, catalytic domain AV939_RS16625 PF03413 Peptidase propeptide and YPEB domain AV939_RS16625 PF07504 Fungalysin/Thermolysin Propeptide Motif AV939_RS16630 PF16485 Protealysin propeptide AV939_RS16630 PF02868 Thermolysin metallopeptidase, alpha-helical domain AV939_RS16630 PF01447 Thermolysin metallopeptidase, catalytic domain AV939_RS16635 PF00498 FHA domain AV939_RS16635 PF01061 ABC-2 type transporter AV939_RS16635 PF00005 ABC transporter AV939_RS16640 PF00271 Helicase conserved C-terminal domain AV939_RS16640 PF00270 DEAD/DEAH box helicase AV939_RS16645 PF01081 KDPG and KHG aldolase AV939_RS16650 PF00294 pfkB family carbohydrate kinase AV939_RS16655 PF07729 FCD domain AV939_RS16655 PF00392 Bacterial regulatory proteins, gntR family AV939_RS16665 PF12795 Mechanosensitive ion channel porin domain AV939_RS16665 PF12794 Mechanosensitive ion channel inner membrane domain 1 AV939_RS16665 PF00924 Mechanosensitive ion channel AV939_RS16675 PF00141 Peroxidase AV939_RS16685 PF00999 Sodium/hydrogen exchanger family AV939_RS16685 PF02254 TrkA-N domain AV939_RS16700 PF03372 Endonuclease/Exonuclease/phosphatase family AV939_RS16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS16705 PF03466 LysR substrate binding domain AV939_RS16715 PF01925 Sulfite exporter TauE/SafE AV939_RS16720 PF00155 Aminotransferase class I and II AV939_RS16725 PF08769 Sporulation initiation factor Spo0A C terminal AV939_RS16725 PF00072 Response regulator receiver domain AV939_RS16735 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS16745 PF03104 DNA polymerase family B, exonuclease domain AV939_RS16745 PF00136 DNA polymerase family B AV939_RS16790 PF05958 tRNA (Uracil-5-)-methyltransferase AV939_RS16795 PF00440 Bacterial regulatory proteins, tetR family AV939_RS16810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV939_RS16810 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS16820 PF03167 Uracil DNA glycosylase superfamily AV939_RS16825 PF00563 EAL domain AV939_RS16825 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS16825 PF03707 Bacterial signalling protein N terminal repeat AV939_RS16835 PF01507 Phosphoadenosine phosphosulfate reductase family AV939_RS16840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV939_RS16840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV939_RS16845 PF00175 Oxidoreductase NAD-binding domain AV939_RS16845 PF00258 Flavodoxin AV939_RS16845 PF00667 FAD binding domain AV939_RS16850 PF00593 TonB dependent receptor AV939_RS16850 PF07715 TonB-dependent Receptor Plug Domain AV939_RS16875 PF04012 PspA/IM30 family AV939_RS16885 PF01207 Dihydrouridine synthase (Dus) AV939_RS16905 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS16905 PF00563 EAL domain AV939_RS16905 PF03707 Bacterial signalling protein N terminal repeat AV939_RS16910 PF00756 Putative esterase AV939_RS16915 PF01553 Acyltransferase AV939_RS16920 PF01553 Acyltransferase AV939_RS16925 PF00924 Mechanosensitive ion channel AV939_RS16940 PF01370 NAD dependent epimerase/dehydratase family AV939_RS16945 PF00209 Sodium:neurotransmitter symporter family AV939_RS16960 PF01625 Peptide methionine sulfoxide reductase AV939_RS16975 PF00258 Flavodoxin AV939_RS16985 PF02472 Biopolymer transport protein ExbD/TolR AV939_RS16995 PF13181 Tetratricopeptide repeat AV939_RS16995 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AV939_RS17000 PF01270 Glycosyl hydrolases family 8 AV939_RS17010 PF07238 PilZ domain AV939_RS17010 PF03170 Bacterial cellulose synthase subunit AV939_RS17010 PF00535 Glycosyl transferase family 2 AV939_RS17025 PF05175 Methyltransferase small domain AV939_RS17030 PF13460 NAD(P)H-binding AV939_RS17035 PF00326 Prolyl oligopeptidase family AV939_RS17035 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AV939_RS17040 PF08000 Bacterial PH domain AV939_RS17045 PF00563 EAL domain AV939_RS17045 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS17045 PF08448 PAS fold AV939_RS17050 PF00291 Pyridoxal-phosphate dependent enzyme AV939_RS17055 PF07969 Amidohydrolase family AV939_RS17060 PF00753 Metallo-beta-lactamase superfamily AV939_RS17070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS17070 PF03466 LysR substrate binding domain AV939_RS17075 PF13230 Glutamine amidotransferases class-II AV939_RS17090 PF01037 Lrp/AsnC ligand binding domain AV939_RS17105 PF00753 Metallo-beta-lactamase superfamily AV939_RS17105 PF16123 Hydroxyacylglutathione hydrolase C-terminus AV939_RS17115 PF11798 IMS family HHH motif AV939_RS17115 PF00817 impB/mucB/samB family AV939_RS17115 PF11799 impB/mucB/samB family C-terminal domain AV939_RS17125 PF02424 ApbE family AV939_RS17130 PF00175 Oxidoreductase NAD-binding domain AV939_RS17130 PF00111 2Fe-2S iron-sulfur cluster binding domain AV939_RS17130 PF00970 Oxidoreductase FAD-binding domain AV939_RS17135 PF02508 Rnf-Nqr subunit, membrane protein AV939_RS17140 PF02508 Rnf-Nqr subunit, membrane protein AV939_RS17145 PF04205 FMN-binding domain AV939_RS17150 PF03116 NQR2, RnfD, RnfE family AV939_RS17155 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AV939_RS17155 PF11973 NQRA C-terminal domain AV939_RS17160 PF12241 Trans-2-enoyl-CoA reductase catalytic region AV939_RS17160 PF07055 Enoyl reductase FAD binding domain AV939_RS17160 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AV939_RS17165 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AV939_RS17165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV939_RS17170 PF00311 Phosphoenolpyruvate carboxylase AV939_RS17175 PF00141 Peroxidase AV939_RS17180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AV939_RS17180 PF00056 lactate/malate dehydrogenase, NAD binding domain AV939_RS17185 PF02863 Arginine repressor, C-terminal domain AV939_RS17185 PF01316 Arginine repressor, DNA binding domain AV939_RS17190 PF00593 TonB dependent receptor AV939_RS17190 PF07715 TonB-dependent Receptor Plug Domain AV939_RS17200 PF00593 TonB dependent receptor AV939_RS17215 PF00485 Phosphoribulokinase / Uridine kinase family AV939_RS17220 PF07670 Nucleoside recognition AV939_RS17220 PF07662 Na+ dependent nucleoside transporter C-terminus AV939_RS17220 PF01773 Na+ dependent nucleoside transporter N-terminus AV939_RS17235 PF02469 Fasciclin domain AV939_RS17245 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS17245 PF00072 Response regulator receiver domain AV939_RS17255 PF00571 CBS domain AV939_RS17255 PF01380 SIS domain AV939_RS17260 PF00474 Sodium:solute symporter family AV939_RS17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS17270 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS17270 PF18415 Histidine kinase receptor ArcB trans-membrane domain AV939_RS17280 PF18030 RimK PreATP-grasp domain AV939_RS17280 PF08443 RimK-like ATP-grasp domain AV939_RS17290 PF18030 RimK PreATP-grasp domain AV939_RS17290 PF08443 RimK-like ATP-grasp domain AV939_RS17300 PF00072 Response regulator receiver domain AV939_RS17300 PF00196 Bacterial regulatory proteins, luxR family AV939_RS17305 PF16177 Acetyl-coenzyme A synthetase N-terminus AV939_RS17305 PF00501 AMP-binding enzyme AV939_RS17305 PF13193 AMP-binding enzyme C-terminal domain AV939_RS17315 PF00128 Alpha amylase, catalytic domain AV939_RS17315 PF02806 Alpha amylase, C-terminal all-beta domain AV939_RS17320 PF02690 Na+/Pi-cotransporter AV939_RS17325 PF00248 Aldo/keto reductase family AV939_RS17340 PF00199 Catalase AV939_RS17340 PF06628 Catalase-related immune-responsive AV939_RS17350 PF00009 Elongation factor Tu GTP binding domain AV939_RS17350 PF03144 Elongation factor Tu domain 2 AV939_RS17350 PF03143 Elongation factor Tu C-terminal domain AV939_RS17375 PF03309 Type III pantothenate kinase AV939_RS17380 PF02237 Biotin protein ligase C terminal domain AV939_RS17380 PF03099 Biotin/lipoate A/B protein ligase family AV939_RS17380 PF08279 HTH domain AV939_RS17385 PF01565 FAD binding domain AV939_RS17385 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AV939_RS17435 PF00664 ABC transporter transmembrane region AV939_RS17435 PF03412 Peptidase C39 family AV939_RS17435 PF00005 ABC transporter AV939_RS17440 PF03466 LysR substrate binding domain AV939_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS17450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AV939_RS17450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AV939_RS17450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AV939_RS17455 PF00535 Glycosyl transferase family 2 AV939_RS17460 PF16363 GDP-mannose 4,6 dehydratase AV939_RS17465 PF04321 RmlD substrate binding domain AV939_RS17470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AV939_RS17475 PF00483 Nucleotidyl transferase AV939_RS17485 PF00535 Glycosyl transferase family 2 AV939_RS17490 PF00535 Glycosyl transferase family 2 AV939_RS17500 PF00535 Glycosyl transferase family 2 AV939_RS17515 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS17525 PF00535 Glycosyl transferase family 2 AV939_RS17540 PF00483 Nucleotidyl transferase AV939_RS17540 PF01050 Mannose-6-phosphate isomerase AV939_RS17545 PF01196 Ribosomal protein L17 AV939_RS17550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AV939_RS17550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AV939_RS17550 PF01000 RNA polymerase Rpb3/RpoA insert domain AV939_RS17555 PF01479 S4 domain AV939_RS17555 PF00163 Ribosomal protein S4/S9 N-terminal domain AV939_RS17560 PF00411 Ribosomal protein S11 AV939_RS17565 PF00416 Ribosomal protein S13/S18 AV939_RS17570 PF00344 SecY translocase AV939_RS17575 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AV939_RS17580 PF00327 Ribosomal protein L30p/L7e AV939_RS17585 PF00333 Ribosomal protein S5, N-terminal domain AV939_RS17585 PF03719 Ribosomal protein S5, C-terminal domain AV939_RS17590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AV939_RS17595 PF00347 Ribosomal protein L6 AV939_RS17600 PF00410 Ribosomal protein S8 AV939_RS17605 PF00253 Ribosomal protein S14p/S29e AV939_RS17610 PF00281 Ribosomal protein L5 AV939_RS17610 PF00673 ribosomal L5P family C-terminus AV939_RS17615 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AV939_RS17615 PF00467 KOW motif AV939_RS17620 PF00238 Ribosomal protein L14p/L23e AV939_RS17625 PF09308 LuxQ, periplasmic AV939_RS17625 PF00072 Response regulator receiver domain AV939_RS17625 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS17635 PF00082 Subtilase family AV939_RS17635 PF05922 Peptidase inhibitor I9 AV939_RS17640 PF00588 SpoU rRNA Methylase family AV939_RS17640 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV939_RS17645 PF00773 RNB domain AV939_RS17645 PF17876 Cold shock domain AV939_RS17645 PF00575 S1 RNA binding domain AV939_RS17645 PF08461 Ribonuclease R winged-helix domain AV939_RS17645 PF08206 Ribonuclease B OB domain AV939_RS17650 PF09423 PhoD-like phosphatase AV939_RS17650 PF16655 PhoD-like phosphatase, N-terminal domain AV939_RS17660 PF08238 Sel1 repeat AV939_RS17670 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AV939_RS17675 PF00970 Oxidoreductase FAD-binding domain AV939_RS17675 PF00175 Oxidoreductase NAD-binding domain AV939_RS17680 PF04389 Peptidase family M28 AV939_RS17700 PF01654 Cytochrome bd terminal oxidase subunit I AV939_RS17705 PF02322 Cytochrome bd terminal oxidase subunit II AV939_RS17710 PF12729 Four helix bundle sensory module for signal transduction AV939_RS17710 PF00672 HAMP domain AV939_RS17710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS17715 PF01037 Lrp/AsnC ligand binding domain AV939_RS17715 PF13404 AsnC-type helix-turn-helix domain AV939_RS17720 PF00291 Pyridoxal-phosphate dependent enzyme AV939_RS17730 PF00313 'Cold-shock' DNA-binding domain AV939_RS17735 PF03109 ABC1 family AV939_RS17745 PF01209 ubiE/COQ5 methyltransferase family AV939_RS17755 PF01432 Peptidase family M3 AV939_RS17760 PF00072 Response regulator receiver domain AV939_RS17770 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV939_RS17770 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS17775 PF00158 Sigma-54 interaction domain AV939_RS17775 PF00072 Response regulator receiver domain AV939_RS17775 PF02954 Bacterial regulatory protein, Fis family AV939_RS17780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV939_RS17780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS17785 PF01568 Molydopterin dinucleotide binding domain AV939_RS17785 PF00384 Molybdopterin oxidoreductase AV939_RS17785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AV939_RS17785 PF10518 TAT (twin-arginine translocation) pathway signal sequence AV939_RS17790 PF14685 Tricorn protease PDZ domain AV939_RS17790 PF14684 Tricorn protease C1 domain AV939_RS17790 PF03572 Peptidase family S41 AV939_RS17790 PF07676 WD40-like Beta Propeller Repeat AV939_RS17805 PF00664 ABC transporter transmembrane region AV939_RS17805 PF03412 Peptidase C39 family AV939_RS17805 PF00005 ABC transporter AV939_RS17810 PF00196 Bacterial regulatory proteins, luxR family AV939_RS17810 PF00072 Response regulator receiver domain AV939_RS17825 PF00004 ATPase family associated with various cellular activities (AAA) AV939_RS17825 PF07724 AAA domain (Cdc48 subfamily) AV939_RS17830 PF00227 Proteasome subunit AV939_RS17835 PF05036 Sporulation related domain AV939_RS17840 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AV939_RS17840 PF00270 DEAD/DEAH box helicase AV939_RS17840 PF00271 Helicase conserved C-terminal domain AV939_RS17840 PF17764 3′ DNA-binding domain (3′BD) AV939_RS17840 PF18074 Primosomal protein N C-terminal domain AV939_RS17845 PF01197 Ribosomal protein L31 AV939_RS17855 PF00390 Malic enzyme, N-terminal domain AV939_RS17855 PF03949 Malic enzyme, NAD binding domain AV939_RS17860 PF01340 Met Apo-repressor, MetJ AV939_RS17865 PF02219 Methylenetetrahydrofolate reductase AV939_RS17870 PF03631 Virulence factor BrkB AV939_RS17885 PF00561 alpha/beta hydrolase fold AV939_RS17890 PF02580 D-Tyr-tRNA(Tyr) deacylase AV939_RS17895 PF09500 Putative thioesterase (yiiD_Cterm) AV939_RS17895 PF00583 Acetyltransferase (GNAT) family AV939_RS17900 PF04542 Sigma-70 region 2 AV939_RS17900 PF00140 Sigma-70 factor, region 1.2 AV939_RS17900 PF04545 Sigma-70, region 4 AV939_RS17905 PF08668 HDOD domain AV939_RS17905 PF00563 EAL domain AV939_RS17910 PF08668 HDOD domain AV939_RS17910 PF00563 EAL domain AV939_RS17915 PF18075 FtsX extracellular domain AV939_RS17920 PF00005 ABC transporter AV939_RS17925 PF00448 SRP54-type protein, GTPase domain AV939_RS17925 PF02881 SRP54-type protein, helical bundle domain AV939_RS17940 PF01914 MarC family integral membrane protein AV939_RS17950 PF12404 Peptidase AV939_RS17950 PF00883 Cytosol aminopeptidase family, catalytic domain AV939_RS17955 PF17746 SfsA N-terminal OB domain AV939_RS17955 PF03749 Sugar fermentation stimulation protein RE domain AV939_RS17960 PF01258 Prokaryotic dksA/traR C4-type zinc finger AV939_RS17965 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV939_RS17970 PF12626 Polymerase A arginine-rich C-terminus AV939_RS17970 PF01743 Poly A polymerase head domain AV939_RS17970 PF12627 Probable RNA and SrmB- binding site of polymerase A AV939_RS17975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AV939_RS17980 PF02548 Ketopantoate hydroxymethyltransferase AV939_RS17985 PF02569 Pantoate-beta-alanine ligase AV939_RS17990 PF00282 Pyridoxal-dependent decarboxylase conserved domain AV939_RS17995 PF12792 CSS motif domain associated with EAL AV939_RS17995 PF00563 EAL domain AV939_RS18005 PF01061 ABC-2 type transporter AV939_RS18010 PF00005 ABC transporter AV939_RS18015 PF00072 Response regulator receiver domain AV939_RS18015 PF00486 Transcriptional regulatory protein, C terminal AV939_RS18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS18020 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS18020 PF00672 HAMP domain AV939_RS18025 PF07715 TonB-dependent Receptor Plug Domain AV939_RS18025 PF00593 TonB dependent receptor AV939_RS18030 PF18331 PKHD-type hydroxylase C-terminal domain AV939_RS18030 PF13640 2OG-Fe(II) oxygenase superfamily AV939_RS18045 PF01595 Cyclin M transmembrane N-terminal domain AV939_RS18045 PF00571 CBS domain AV939_RS18050 PF03773 Predicted permease AV939_RS18055 PF02554 Carbon starvation protein CstA AV939_RS18055 PF13722 5TM C-terminal transporter carbon starvation CstA AV939_RS18065 PF00474 Sodium:solute symporter family AV939_RS18070 PF07859 alpha/beta hydrolase fold AV939_RS18080 PF00175 Oxidoreductase NAD-binding domain AV939_RS18080 PF00258 Flavodoxin AV939_RS18080 PF00667 FAD binding domain AV939_RS18105 PF03143 Elongation factor Tu C-terminal domain AV939_RS18105 PF03144 Elongation factor Tu domain 2 AV939_RS18105 PF00009 Elongation factor Tu GTP binding domain AV939_RS18110 PF03144 Elongation factor Tu domain 2 AV939_RS18110 PF03764 Elongation factor G, domain IV AV939_RS18110 PF14492 Elongation Factor G, domain II AV939_RS18110 PF00679 Elongation factor G C-terminus AV939_RS18110 PF00009 Elongation factor Tu GTP binding domain AV939_RS18115 PF00177 Ribosomal protein S7p/S5e AV939_RS18120 PF00164 Ribosomal protein S12/S23 AV939_RS18125 PF04998 RNA polymerase Rpb1, domain 5 AV939_RS18125 PF05000 RNA polymerase Rpb1, domain 4 AV939_RS18125 PF04983 RNA polymerase Rpb1, domain 3 AV939_RS18125 PF00623 RNA polymerase Rpb1, domain 2 AV939_RS18125 PF04997 RNA polymerase Rpb1, domain 1 AV939_RS18130 PF00562 RNA polymerase Rpb2, domain 6 AV939_RS18130 PF04560 RNA polymerase Rpb2, domain 7 AV939_RS18130 PF04563 RNA polymerase beta subunit AV939_RS18130 PF04561 RNA polymerase Rpb2, domain 2 AV939_RS18130 PF04565 RNA polymerase Rpb2, domain 3 AV939_RS18130 PF10385 RNA polymerase beta subunit external 1 domain AV939_RS18135 PF16320 Ribosomal protein L7/L12 dimerisation domain AV939_RS18135 PF00542 Ribosomal protein L7/L12 C-terminal domain AV939_RS18140 PF00466 Ribosomal protein L10 AV939_RS18145 PF00687 Ribosomal protein L1p/L10e family AV939_RS18150 PF03946 Ribosomal protein L11, N-terminal domain AV939_RS18150 PF00298 Ribosomal protein L11, RNA binding domain AV939_RS18155 PF00467 KOW motif AV939_RS18155 PF02357 Transcription termination factor nusG AV939_RS18160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AV939_RS18170 PF00005 ABC transporter AV939_RS18170 PF00664 ABC transporter transmembrane region AV939_RS18175 PF03737 Aldolase/RraA AV939_RS18180 PF01431 Peptidase family M13 AV939_RS18180 PF05649 Peptidase family M13 AV939_RS18190 PF00271 Helicase conserved C-terminal domain AV939_RS18190 PF00270 DEAD/DEAH box helicase AV939_RS18190 PF03880 DbpA RNA binding domain AV939_RS18195 PF01979 Amidohydrolase family AV939_RS18205 PF08212 Lipocalin-like domain AV939_RS18210 PF00248 Aldo/keto reductase family AV939_RS18215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV939_RS18220 PF00128 Alpha amylase, catalytic domain AV939_RS18230 PF01227 GTP cyclohydrolase I AV939_RS18235 PF05643 Putative bacterial lipoprotein (DUF799) AV939_RS18245 PF03783 Curli production assembly/transport component CsgG AV939_RS18250 PF04371 Porphyromonas-type peptidyl-arginine deiminase AV939_RS18255 PF00795 Carbon-nitrogen hydrolase AV939_RS18270 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AV939_RS18275 PF00270 DEAD/DEAH box helicase AV939_RS18275 PF08494 DEAD/H associated AV939_RS18275 PF00271 Helicase conserved C-terminal domain AV939_RS18285 PF01068 ATP dependent DNA ligase domain AV939_RS18285 PF04679 ATP dependent DNA ligase C terminal region AV939_RS18285 PF04675 DNA ligase N terminus AV939_RS18295 PF00294 pfkB family carbohydrate kinase AV939_RS18300 PF00480 ROK family AV939_RS18310 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS18310 PF00043 Glutathione S-transferase, C-terminal domain AV939_RS18325 PF00561 alpha/beta hydrolase fold AV939_RS18340 PF00171 Aldehyde dehydrogenase family AV939_RS18345 PF00205 Thiamine pyrophosphate enzyme, central domain AV939_RS18345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV939_RS18345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV939_RS18355 PF00762 Ferrochelatase AV939_RS18360 PF03806 AbgT putative transporter family AV939_RS18365 PF01145 SPFH domain / Band 7 family AV939_RS18370 PF01145 SPFH domain / Band 7 family AV939_RS18370 PF12221 Bacterial membrane protein N terminal AV939_RS18375 PF16360 GTP-binding GTPase Middle Region AV939_RS18375 PF01926 50S ribosome-binding GTPase AV939_RS18375 PF13167 GTP-binding GTPase N-terminal AV939_RS18380 PF17209 Hfq protein AV939_RS18390 PF01119 DNA mismatch repair protein, C-terminal domain AV939_RS18390 PF08676 MutL C terminal dimerisation domain AV939_RS18395 PF01520 N-acetylmuramoyl-L-alanine amidase AV939_RS18400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AV939_RS18405 PF01256 Carbohydrate kinase AV939_RS18405 PF03853 YjeF-related protein N-terminus AV939_RS18410 PF08331 Domain of unknown function (DUF1730) AV939_RS18420 PF01208 Uroporphyrinogen decarboxylase (URO-D) AV939_RS18425 PF00293 NUDIX domain AV939_RS18425 PF09297 NADH pyrophosphatase zinc ribbon domain AV939_RS18430 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AV939_RS18435 PF01475 Ferric uptake regulator family AV939_RS18445 PF01894 Uncharacterised protein family UPF0047 AV939_RS18450 PF00691 OmpA family AV939_RS18450 PF05736 OprF membrane domain AV939_RS18455 PF03796 DnaB-like helicase C terminal domain AV939_RS18455 PF00772 DnaB-like helicase N terminal domain AV939_RS18480 PF03473 MOSC domain AV939_RS18480 PF03475 3-alpha domain AV939_RS18490 PF00873 AcrB/AcrD/AcrF family AV939_RS18495 PF03948 Ribosomal protein L9, C-terminal domain AV939_RS18495 PF01281 Ribosomal protein L9, N-terminal domain AV939_RS18500 PF01084 Ribosomal protein S18 AV939_RS18505 PF01250 Ribosomal protein S6 AV939_RS18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS18510 PF00989 PAS fold AV939_RS18510 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS18510 PF18698 Histidine kinase sensor domain AV939_RS18510 PF00672 HAMP domain AV939_RS18520 PF08447 PAS fold AV939_RS18520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS18525 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS18525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV939_RS18530 PF00672 HAMP domain AV939_RS18530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV939_RS18530 PF17200 Single Cache domain 2 AV939_RS18535 PF00356 Bacterial regulatory proteins, lacI family AV939_RS18545 PF00232 Glycosyl hydrolase family 1 AV939_RS18555 PF00005 ABC transporter AV939_RS18560 PF01032 FecCD transport family AV939_RS18565 PF01497 Periplasmic binding protein AV939_RS18575 PF07715 TonB-dependent Receptor Plug Domain AV939_RS18575 PF00593 TonB dependent receptor AV939_RS18580 PF07690 Major Facilitator Superfamily AV939_RS18585 PF14310 Fibronectin type III-like domain AV939_RS18585 PF00933 Glycosyl hydrolase family 3 N terminal domain AV939_RS18585 PF01915 Glycosyl hydrolase family 3 C-terminal domain AV939_RS18600 PF03601 Conserved hypothetical protein 698 AV939_RS18605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AV939_RS18610 PF00248 Aldo/keto reductase family AV939_RS18615 PF00392 Bacterial regulatory proteins, gntR family AV939_RS18615 PF07702 UTRA domain AV939_RS18630 PF00474 Sodium:solute symporter family AV939_RS18635 PF01545 Cation efflux family AV939_RS18655 PF00722 Glycosyl hydrolases family 16 AV939_RS18670 PF07715 TonB-dependent Receptor Plug Domain AV939_RS18670 PF00593 TonB dependent receptor AV939_RS18675 PF00664 ABC transporter transmembrane region AV939_RS18675 PF00005 ABC transporter AV939_RS18680 PF00664 ABC transporter transmembrane region AV939_RS18680 PF00005 ABC transporter AV939_RS18690 PF02322 Cytochrome bd terminal oxidase subunit II AV939_RS18695 PF01654 Cytochrome bd terminal oxidase subunit I AV939_RS18705 PF00072 Response regulator receiver domain AV939_RS18705 PF00158 Sigma-54 interaction domain AV939_RS18705 PF02954 Bacterial regulatory protein, Fis family AV939_RS18740 PF01132 Elongation factor P (EF-P) OB domain AV939_RS18740 PF08207 Elongation factor P (EF-P) KOW-like domain AV939_RS18740 PF09285 Elongation factor P, C-terminal AV939_RS18765 PF13474 SnoaL-like domain AV939_RS18805 PF05532 CsbD-like AV939_RS18820 PF08281 Sigma-70, region 4 AV939_RS18820 PF04542 Sigma-70 region 2 AV939_RS18825 PF00082 Subtilase family AV939_RS18825 PF05922 Peptidase inhibitor I9 AV939_RS18845 PF00472 RF-1 domain AV939_RS18850 PF08386 TAP-like protein AV939_RS18850 PF00561 alpha/beta hydrolase fold AV939_RS18875 PF01292 Prokaryotic cytochrome b561 AV939_RS18880 PF04264 YceI-like domain AV939_RS18885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV939_RS18890 PF00593 TonB dependent receptor AV939_RS18890 PF07715 TonB-dependent Receptor Plug Domain AV939_RS18900 PF01048 Phosphorylase superfamily AV939_RS18905 PF03466 LysR substrate binding domain AV939_RS18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS18910 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AV939_RS18915 PF00107 Zinc-binding dehydrogenase AV939_RS18915 PF16884 N-terminal domain of oxidoreductase AV939_RS18920 PF00563 EAL domain AV939_RS18920 PF01590 GAF domain AV939_RS18920 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS18920 PF00360 Phytochrome region AV939_RS18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS18925 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS18925 PF09308 LuxQ, periplasmic AV939_RS18925 PF00072 Response regulator receiver domain AV939_RS18940 PF00296 Luciferase-like monooxygenase AV939_RS18950 PF00005 ABC transporter AV939_RS18970 PF02492 CobW/HypB/UreG, nucleotide-binding domain AV939_RS18970 PF07683 Cobalamin synthesis protein cobW C-terminal domain AV939_RS18985 PF07715 TonB-dependent Receptor Plug Domain AV939_RS18985 PF00593 TonB dependent receptor AV939_RS18990 PF01258 Prokaryotic dksA/traR C4-type zinc finger AV939_RS19015 PF01380 SIS domain AV939_RS19020 PF08220 DeoR-like helix-turn-helix domain AV939_RS19020 PF00455 DeoR C terminal sensor domain AV939_RS19025 PF00132 Bacterial transferase hexapeptide (six repeats) AV939_RS19025 PF14602 Hexapeptide repeat of succinyl-transferase AV939_RS19025 PF12804 MobA-like NTP transferase domain AV939_RS19035 PF00892 EamA-like transporter family AV939_RS19040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AV939_RS19040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AV939_RS19045 PF12833 Helix-turn-helix domain AV939_RS19045 PF01965 DJ-1/PfpI family AV939_RS19050 PF00144 Beta-lactamase AV939_RS19055 PF17810 Arginine decarboxylase helical bundle domain AV939_RS19055 PF17944 Arginine decarboxylase C-terminal helical extension AV939_RS19055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV939_RS19065 PF02233 NAD(P) transhydrogenase beta subunit AV939_RS19070 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AV939_RS19075 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV939_RS19075 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV939_RS19095 PF07683 Cobalamin synthesis protein cobW C-terminal domain AV939_RS19095 PF02492 CobW/HypB/UreG, nucleotide-binding domain AV939_RS19105 PF00563 EAL domain AV939_RS19105 PF00990 Diguanylate cyclase, GGDEF domain AV939_RS19105 PF03707 Bacterial signalling protein N terminal repeat AV939_RS19110 PF00118 TCP-1/cpn60 chaperonin family AV939_RS19115 PF00166 Chaperonin 10 Kd subunit AV939_RS19125 PF02683 Cytochrome C biogenesis protein transmembrane region AV939_RS19125 PF11412 Disulphide bond corrector protein DsbC AV939_RS19130 PF01551 Peptidase family M23 AV939_RS19135 PF01220 Dehydroquinase class II AV939_RS19140 PF00364 Biotin-requiring enzyme AV939_RS19145 PF02785 Biotin carboxylase C-terminal domain AV939_RS19145 PF00289 Biotin carboxylase, N-terminal domain AV939_RS19145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV939_RS19165 PF00929 Exonuclease AV939_RS19165 PF02811 PHP domain AV939_RS19165 PF14579 Helix-hairpin-helix motif AV939_RS19165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV939_RS19165 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV939_RS19165 PF11490 DNA polymerase III polC-type N-terminus II AV939_RS19180 PF01355 High potential iron-sulfur protein AV939_RS19185 PF01425 Amidase AV939_RS19200 PF01207 Dihydrouridine synthase (Dus) AV939_RS19205 PF02954 Bacterial regulatory protein, Fis family AV939_RS19210 PF02142 MGS-like domain AV939_RS19210 PF01808 AICARFT/IMPCHase bienzyme AV939_RS19220 PF02844 Phosphoribosylglycinamide synthetase, N domain AV939_RS19220 PF02843 Phosphoribosylglycinamide synthetase, C domain AV939_RS19220 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AV939_RS19230 PF00520 Ion transport protein AV939_RS19230 PF00027 Cyclic nucleotide-binding domain AV939_RS19240 PF00485 Phosphoribulokinase / Uridine kinase family AV939_RS19245 PF00860 Permease family AV939_RS19250 PF07660 Secretin and TonB N terminus short domain AV939_RS19250 PF00593 TonB dependent receptor AV939_RS19250 PF07715 TonB-dependent Receptor Plug Domain AV939_RS19260 PF00486 Transcriptional regulatory protein, C terminal AV939_RS19260 PF00072 Response regulator receiver domain AV939_RS19265 PF00512 His Kinase A (phospho-acceptor) domain AV939_RS19265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV939_RS19265 PF00672 HAMP domain AV939_RS19275 PF01293 Phosphoenolpyruvate carboxykinase AV939_RS19280 PF01430 Hsp33 protein AV939_RS19285 PF01479 S4 domain AV939_RS19290 PF11356 Type II secretion system protein C AV939_RS19295 PF03958 Bacterial type II/III secretion system short domain AV939_RS19295 PF00263 Bacterial type II and III secretion system protein AV939_RS19300 PF00437 Type II/IV secretion system protein AV939_RS19305 PF00482 Type II secretion system (T2SS), protein F AV939_RS19310 PF08334 Type II secretion system (T2SS), protein G AV939_RS19310 PF07963 Prokaryotic N-terminal methylation motif AV939_RS19315 PF12019 Type II transport protein GspH AV939_RS19315 PF07963 Prokaryotic N-terminal methylation motif AV939_RS19320 PF07963 Prokaryotic N-terminal methylation motif AV939_RS19320 PF02501 Type II secretion system (T2SS), protein I AV939_RS19325 PF07963 Prokaryotic N-terminal methylation motif AV939_RS19325 PF11612 Type II secretion system (T2SS), protein J AV939_RS19330 PF03934 Type II secretion system (T2SS), protein K AV939_RS19335 PF05134 Type II secretion system (T2SS), protein L AV939_RS19335 PF12693 GspL periplasmic domain AV939_RS19340 PF04612 Type II secretion system (T2SS), protein M AV939_RS19350 PF12706 Beta-lactamase superfamily domain AV939_RS19355 PF00171 Aldehyde dehydrogenase family AV939_RS19360 PF01931 Protein of unknown function DUF84 AV939_RS19365 PF13419 Haloacid dehalogenase-like hydrolase AV939_RS19370 PF00293 NUDIX domain AV939_RS19375 PF00459 Inositol monophosphatase family AV939_RS19385 PF00535 Glycosyl transferase family 2 AV939_RS19390 PF04349 Periplasmic glucan biosynthesis protein, MdoG AV939_RS19400 PF06794 Uncharacterised protein family (UPF0270) AV939_RS19405 PF00561 alpha/beta hydrolase fold AV939_RS19415 PF00005 ABC transporter AV939_RS19415 PF12848 ABC transporter AV939_RS19430 PF04102 SlyX AV939_RS19440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV939_RS19440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AV939_RS19450 PF01272 Transcription elongation factor, GreA/GreB, C-term AV939_RS19450 PF03449 Transcription elongation factor, N-terminal AV939_RS19455 PF09371 Tex-like protein N-terminal domain AV939_RS19455 PF00575 S1 RNA binding domain AV939_RS19455 PF16921 Tex protein YqgF-like domain AV939_RS19455 PF17674 HHH domain AV939_RS19470 PF00561 alpha/beta hydrolase fold AV939_RS19475 PF00156 Phosphoribosyl transferase domain AV939_RS19485 PF01106 NifU-like domain AV939_RS19485 PF01521 Iron-sulphur cluster biosynthesis AV939_RS19495 PF01177 Asp/Glu/Hydantoin racemase AV939_RS19510 PF06445 GyrI-like small molecule binding domain AV939_RS19515 PF01554 MatE AV939_RS19530 PF02630 SCO1/SenC AV939_RS19535 PF01040 UbiA prenyltransferase family AV939_RS19540 PF02628 Cytochrome oxidase assembly protein AV939_RS19560 PF00510 Cytochrome c oxidase subunit III AV939_RS19565 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AV939_RS19570 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV939_RS19575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV939_RS19575 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AV939_RS19580 PF00717 Peptidase S24-like AV939_RS19580 PF01726 LexA DNA binding domain AV939_RS19585 PF07715 TonB-dependent Receptor Plug Domain AV939_RS19585 PF00593 TonB dependent receptor AV939_RS19595 PF01553 Acyltransferase AV939_RS19600 PF00291 Pyridoxal-phosphate dependent enzyme AV939_RS19600 PF00585 C-terminal regulatory domain of Threonine dehydratase AV939_RS19605 PF00920 Dehydratase family AV939_RS19610 PF01063 Amino-transferase class IV AV939_RS19615 PF03458 UPF0126 domain AV939_RS19620 PF13335 Magnesium chelatase, subunit ChlI C-terminal AV939_RS19620 PF01078 Magnesium chelatase, subunit ChlI AV939_RS19625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV939_RS19625 PF03466 LysR substrate binding domain AV939_RS19630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AV939_RS19630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AV939_RS19635 PF07690 Major Facilitator Superfamily AV939_RS19645 PF01103 Surface antigen AV939_RS19645 PF07244 Surface antigen variable number repeat AV939_RS19645 PF17243 POTRA domain TamA domain 1 AV939_RS19650 PF04357 TamB, inner membrane protein subunit of TAM complex AV939_RS19675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV939_RS19675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV939_RS19685 PF01472 PUA domain AV939_RS19685 PF00696 Amino acid kinase family AV939_RS19705 PF03109 ABC1 family AV939_RS19715 PF04116 Fatty acid hydroxylase superfamily AV939_RS19730 PF01979 Amidohydrolase family AV939_RS19750 PF06724 Domain of Unknown Function (DUF1206) AV939_RS19755 PF01206 Sulfurtransferase TusA AV939_RS19760 PF00156 Phosphoribosyl transferase domain AV939_RS19765 PF01138 3' exoribonuclease family, domain 1 AV939_RS19765 PF03725 3' exoribonuclease family, domain 2 AV939_RS19770 PF03755 YicC-like family, N-terminal region AV939_RS19770 PF08340 Domain of unknown function (DUF1732) AV939_RS19785 PF04820 Tryptophan halogenase AV939_RS19790 PF04820 Tryptophan halogenase AV939_RS19800 PF00232 Glycosyl hydrolase family 1 AV939_RS19810 PF00356 Bacterial regulatory proteins, lacI family AV939_RS19820 PF00691 OmpA family AV939_RS19820 PF05736 OprF membrane domain AV939_RS19825 PF01966 HD domain AV939_RS19840 PF00043 Glutathione S-transferase, C-terminal domain AV939_RS19840 PF02798 Glutathione S-transferase, N-terminal domain AV939_RS19855 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AV939_RS19855 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AV939_RS19860 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV939_RS19860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV939_RS19865 PF00231 ATP synthase AV939_RS19870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV939_RS19870 PF00306 ATP synthase alpha/beta chain, C terminal domain AV939_RS19870 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV939_RS19875 PF00213 ATP synthase delta (OSCP) subunit AV939_RS19880 PF00430 ATP synthase B/B' CF(0) AV939_RS19885 PF00137 ATP synthase subunit C AV939_RS19890 PF00119 ATP synthase A chain AV939_RS19900 PF17762 HTH domain found in ParB protein AV939_RS19900 PF02195 ParB-like nuclease domain AV939_RS19905 PF13614 AAA domain AV939_RS19910 PF02527 rRNA small subunit methyltransferase G AV939_RS19915 PF13932 GidA associated domain AV939_RS19915 PF01134 Glucose inhibited division protein A AV939_RS19930 PF00258 Flavodoxin AV939_RS19935 PF10396 GTP-binding protein TrmE N-terminus AV939_RS19935 PF01926 50S ribosome-binding GTPase AV939_RS19935 PF12631 MnmE helical domain AV939_RS19940 PF04461 Protein of unknown function (DUF520) AV939_RS19945 PF02096 60Kd inner membrane protein AV939_RS19945 PF14849 YidC periplasmic domain AV939_RS19950 PF00825 Ribonuclease P AV939_RS19955 PF00468 Ribosomal protein L34