AV939_RS00015 NONE
        gyrB    6662 ..    6693 +  -9.5  -5.93252   ATGTAATAAAGAAAA      GCCTGGCTTCTTT AACAAA AAAGAATCCGGGC       TTTTTTGTTTTTAAA 100 69
AV939_RS00025    7137 ..    7157 + -11.2  -5.50774   ACCTGGTTAATAAAA            GAGTAGGC TTAAT GCCTACTC            TTTTTCTTTATTATA 100 115
AV939_RS00045   11487 ..   11504 + -11.3  -4.08216   AAACCCAATAAAAAA             GCGCTTC TCAT GAAGCGC              TTTTAAAAAACATAC  86 58
AV939_RS00065   14841 ..   14853 +  -4.9  -4.74801   TGCTCACTATTTTCT                GTAAT CTA ATTAC                TTTTTAGTGAGCTTC  72 394
AV939_RS00075 NONE
AV939_RS00080   20604 ..   20618 +  -2.8  -3.65425   TCTGCAGCACCACGG               CGTAAA GAA TATACG               TTTACAATATCTCCG  50 356
AV939_RS00105   25833 ..   25861 +  -2.3  -4.08557   AGACGCGGCTTCATT        GTGGCAAAACCCT AAT ACGTTATTGCCGC        TTATTATTTAGGAGC  54 11
AV939_RS00110 NONE
AV939_RS00115   27499 ..   27533 +  -7.9  -3.06418   TTATTTGATGAACCT    G-ACGGCGTGTTGCAC TAAT GTGCATCATGTCGTGC     TAGTTTATGTCAAAA  65 8
AV939_RS00120 NONE
AV939_RS00125 NONE
AV939_RS00130   29634 ..   29662 + -11.8  -3.56704   CAAACTGGTAATATT        TTGCACCATGGG AATAC CCTGTGGTGCAA        TTCCTTTGATCCACA  85 30
AV939_RS00135   30543 ..   30565 +   -12  -5.69793   ATATCGTAATCTAAA           GCGTTCCGTG TTT TACGGAGCGC           TTTTTTATTTACTAT 100 99
AV939_RS00145   31874 ..   31891 + -11.3  -3.42083   GACTGATATGAATAA             GCAGGCT GTTA AGCCTGC              TCTTCTCTATATTCA  83 45
AV939_RS00155   35807 ..   35827 +  -4.7  -4.54297   TCGATGGTGACATTG            TTAGTGTAG TGC CTACACAGA            TTGTTTTGTTATTAA  70 45
AV939_RS00160 NONE
AV939_RS00165   36186 ..   36227 +  -7.5  -5.21709   ATGTTGGACCATGAA TCCTAATGAATTTTTACTC GAAT GAGTAAGCATTGATTAGGG  TTTTTTACTCTAAGG 100 171
AV939_RS00170   38322 ..   38345 +  -2.4   -3.4398   CTAAATAAGTCGGTA          TTACGCAAAC TAAC GTTTGCAAAA           GTTTTTGCCTTGGCA  46 168
         rrf   38518 ..   38539 + -13.1  -5.76633   TCCCATTCGAAGAAA           GCCCTTATC GTAT GATAAGGGC            TTTTTTTATGTCTAA 100 74
AV939_RS00225   51351 ..   51370 + -10.8  -5.64274   ATTCTAAATAGAAAA            GCAGCATA TATA TATGCTGC             TTTTTTTGTAGGTGA 100 50
AV939_RS00230   52513 ..   52537 +  -7.1  -4.50627   TACACAAATCAAAAA          GGCGCTGTATT AAA ATTAAAGCGCC          TTTATTTAATCCGTG  78 94
AV939_RS00245   55438 ..   55450 +  -2.7  -3.64103   TATAATCTAGTCAAA                TCGTT GAA AATGA                TTTAGCATGTGACTC  49 63
AV939_RS00250   55854 ..   55871 +  -8.4   -5.5112   AATAGTTTCGAAAAA             GCCGCT TTCATT AGCGGC              TTTTTTATTGATGCA 100 46
AV939_RS00255 NONE
AV939_RS00260 NONE
AV939_RS00265   59481 ..   59511 +   -20   -4.3129   GATTAGCTAGTTAGG       TAAGCACGGAGTAA CGA TTACTCCGTGCTTA       TTTTCATCGTAACTA 100 35
        rpmB NONE
        rpmG   61849 ..   61864 + -10.4  -5.50313   TTGTCTCCACGAAAA              CCCAGC CTTT GCTGGG               TTTTTTGCTTTTCTG 100 52
AV939_RS00290   62415 ..   62430 +    -4  -3.35639   CGCTTCTTCCATGGC              TTAGTG AACC CGCTAA               TTAATTAAGCGTATT  49 6
AV939_RS00295   63396 ..   63418 +  -5.6   -5.4505   TGAGCTCAATAGGCA           TGTTGAGCGC AGT GTGTTTAACA           TTTTTTATTAAAGCG  83 82
AV939_RS00310   65904 ..   65930 +  -2.3  -3.65827   CCCTTTGGTGATTAT         GCTCGCATT GATTAAACG AATACGAGC         TTTAACTAGCAATTC  48 127
AV939_RS00315 NONE
AV939_RS00320   67537 ..   67549 +    -2  -3.47403   GGCGTATGTGGTCTG                TACA ACTTA TGTA                TTGGTTCTAGGTTCA  46 3
AV939_RS00325   70028 ..   70039 +  -4.4  -3.33744   AACGAATAGGGCAGC                CTAG CCAG CTAG                 ATTTTTAGCCACAGC  52 32
AV939_RS00330 NONE
         tdh NONE
AV939_RS00340 NONE
AV939_RS00345   73570 ..   73597 + -14.2  -3.61398   TTGGAGCCGATAAGC        GAAAGCAGGGGC AATA GCGCCTGCTTTC         TTATTAGCGAGCAAC 100 9
AV939_RS00355 NONE
        ubiA   76051 ..   76061 +  -5.4  -3.82083   TCGAGTTTTTTCGGA                 TCCA ACA TGGA                 TTTCCCTTATAATGC  61 391
AV939_RS00370   78381 ..   78398 +  -9.9  -3.83026   CTTGGCTTAGTTAAA             CAGCTAG CCTG CTAGCTG              TTTCATATCAAGCAC  81 160
AV939_RS00385   81840 ..   81853 +  -2.3  -4.17556   CACAGGTTCGAATCC               TGTCG GGTG CGCCA                TTTCTTCCAAATGTA  54 12
AV939_RS00390   83425 ..   83435 +  -5.4  -3.84719   TCCCGTTTTCCAACG                 CGTT CTC AACG                 TTTAACTTTGCGCGT  62 97
AV939_RS00400   85103 ..   85127 +  -2.1  -5.42198   TTAGTTTTTTAAAAG          CTTGAGGTCTA AAG TTGAGTTCAAG          TTTTATTTTTTGAAG  77 488
AV939_RS00410   87528 ..   87538 +  -2.4  -5.06414   ACAGGTAGAGTGCCA                 GGCC TAA GCCC                 TTTTTCTTGACCACC  71 489
AV939_RS00420 NONE
AV939_RS00425 NONE
AV939_RS00430 NONE
AV939_RS00435   93544 ..   93561 +  -3.5  -4.46675   ACAGTTGGTTTGTAA             GAAAATT TTGT AGTTTTC              TTTATTATCTTCCAT  62 105
AV939_RS00515  118610 ..  118626 +    -8   -5.2197   CTTTCCTATTAAAAA              TTCCGG CTAGC CCGGAA              TTTTTCGTTTTTATA 100 71
        glyA NONE
AV939_RS00525  121495 ..  121507 +  -4.7  -3.03124   AACTAATTGACGAAC                ACGGC GCT GCCGG                TGTTGCGCACTAAGC  51 0
AV939_RS00530 NONE
AV939_RS00535 NONE
AV939_RS00540 NONE
AV939_RS00545  126898 ..  126913 +    -9  -3.61609   GCTCCCAATCTCAAT              CACCGA TAGG TCGGTG               TTATCATTTGCGTGG  75 449
AV939_RS00560  131844 ..  131854 +  -4.6  -3.57144   AAAACGTGGTTTCAT                 GCTC ACA GGGC                 TTTACCAATCGACCC  55 246
AV939_RS00580 NONE
AV939_RS00585 NONE
AV939_RS00590  139743 ..  139757 +    -5  -4.52589   TCATGAAAAGTAAAT               TTAAGC TTG GCTTAG               TTTTCTATAAACGAC  67 60
AV939_RS00595 NONE
AV939_RS00600  144289 ..  144319 +   -12   -3.9534   CTAGACAACACGTAT       CAAGAAGCGGCT TACCCAT AGCCGCTTTTTG       TTTATAAATGTAAGT  95 50
AV939_RS00605  146543 ..  146558 +  -4.8  -2.63631   GGTACGACTTAGGTG              TTATAC TTTA GTATAA               TGCTATAGCCGTTGC  49 75
AV939_RS00610  149259 ..  149300 +  -9.7  -2.89793   TATATTTTGAATACG TCACAATGC-CGATCATT TTTACTT AAAGATCGCGCATTGTGA TAATTATGTAAATGC  75 104
AV939_RS00615  151520 ..  151533 +  -9.5  -5.77988   ATAAGACACTAAAAA               GCGCC CAAG GGCGC                TTTTTTTATATATGT 100 51
AV939_RS00625 NONE
AV939_RS00630  155089 ..  155125 + -13.2  -2.62921   AACTAAGTTATTCAA    GGTGTAAAAATGTGAG GCTGA CTCTCATTTTTGCACC    GTTCTCAGGTTCTAT  91 86
AV939_RS00635 NONE
AV939_RS00640 NONE
AV939_RS00645 NONE
AV939_RS00650  161099 ..  161120 + -13.1  -6.23545   TGAATTAGAAAAAAA           GGCCTACTT AGAA AAGTAGGCC            TTTTTTTTGTTTACC 100 79
AV939_RS00660 NONE
AV939_RS00665  164753 ..  164780 +  -6.4  -5.71712   CACCGCGTTGAAATA        CCAATG-GCTAAT GCA ATTAGCTCTTTGG        TTTTTTTATCTAGGG 100 348
AV939_RS00675 NONE
AV939_RS00680  167514 ..  167539 + -13.5  -3.56092   TTAAAATAGGGCGAA         TAACAGCGTTA TTCA TAACGCTGTTA          TTTCCCAAGTGATAC 100 32
AV939_RS00775  190346 ..  190358 +  -6.2  -3.67517   GCAAGACACGTTAAT                GGGC AAATA GCCC                TTTACCGTCTTGGTC  62 16
AV939_RS00780  191909 ..  191943 + -20.3  -2.71011   TAACTAGTATCTCAA     CCAACAAAGTTCGCT AAGAC AGCGAACTTTGTTGG     TCATTAAAAACCGGT 100 34
AV939_RS00785 NONE
AV939_RS00790 NONE
AV939_RS00795  196568 ..  196592 + -12.9  -4.89519   ATTAAAAAAGAAAAA          GGCCAGTCAAT TGA AATGACTGGCC          TTTCTTTTATCTTCT 100 60
AV939_RS00820  202432 ..  202461 +  -5.1  -3.52652   GCGGTGTGTAGGAAT       GCCTTTATCTA CCTGTTCT TGGATAAGGGC        TTCTACTTGACTCGC  56 489
AV939_RS00830  203628 ..  203638 +  -6.8  -2.94099   ACCGCTAGGATCGTG                 CCCT ACA AGGG                 TGTATACTACGCGGC  58 64
        rpoZ  203997 ..  204036 + -12.2  -4.74706   GGTAACTATTGTATG  TTTAGGCGCCAGTGCTTT GAAA AAAGCACTGGCGCTTTGC   TTTTTGGGTATTGGC 100 53
AV939_RS00840 NONE
AV939_RS00845 NONE
AV939_RS00850  207388 ..  207400 +  -3.3  -3.03441   CTCATACTTATAGTA                CCTGT CAT ACTGG                TCTTAAACCATACTC  45 45
AV939_RS00855 NONE
AV939_RS00860 NONE
AV939_RS00865  210923 ..  210955 +  -9.2  -5.52384   CTAAACCTATCGAAA      GGCTTGAGCATAAT GTGAA GTGATGCTCAGGCC      TTTTTTTGATCGCAA 100 62
AV939_RS00875 NONE
AV939_RS00880  213190 ..  213218 +  -4.6  -5.18643   GCTGGCTCTAATTAT       CGCGTTAATGGCA TTGT TGCCAGTAG-GCG        TTTTATTTTCGTTAG  79 63
AV939_RS00885 NONE
AV939_RS00890  215725 ..  215760 +  -6.2  -2.57132   CTAACTACCAATACC    CTATGCCAGTGGTTTA AAAT TAAACTGCTGGCACAC     ATTGTAGCCCCCCAG  54 68
AV939_RS00895  217117 ..  217145 + -11.1  -4.37991   TGCGCATACTAAAAA        GCGACTGTTCAGT AAC ATTGAACAGTCAC        TTTTAGCTATTTTTA  90 83
AV939_RS00940  227067 ..  227088 +  -2.3  -2.71681   TAAGTATTCAATTGG           CTAG-CTTGT AGT ACAAGGCCAG           TAGTTAAAGCGATTG  40 15
AV939_RS00945  227490 ..  227508 + -13.2   -5.4251   GTCGGGTATAAAAAA             GCTCAGGT AGT ACCTGAGC             TTTTTTGTGTATAGC 100 65
AV939_RS00955  229186 ..  229200 +  -4.2  -3.54489   AAAGTTGAATGAGAA               GCGAGT TTT ACTCCC               TTAGTTTACCGTTGC  53 46
AV939_RS00960 NONE
AV939_RS00965 NONE
AV939_RS00970  234396 ..  234444 + -10.6   -2.9834   GCTTTGCCGCTTTAA CGTTTTTCCCGCTGT-C-TTGCCA GCT TGGTAACGCACAACGGGAAAAATG TGTCATTATAGTGGT  77 46
AV939_RS00975 NONE
AV939_RS00980  237679 ..  237694 +    -9  -3.83844   AGCGTTATCAAAGAA              GCGTCA AAGG TGACGC               TTGTTGATTGATGCA  77 410
AV939_RS01025  248494 ..  248521 +  -9.2  -2.72344   CTGATGCGCAATGTT        GAGCCTATCTCT GTTT GGATATAGGCTC         TGATTAGGAATAGGC  71 37
AV939_RS01035 NONE
AV939_RS01040  252512 ..  252559 +  -5.1  -4.59853   AAATACCCCATTCTG GGCGCTATAG-GCTTGTTATCTT AGGC AAGGTAATGAACACTAT-GCGCC TTTTTGCAGCCTTAA  70 84
AV939_RS01045  253520 ..  253550 + -15.7  -3.65351   GTCGGCTAAGGTAAC       CAGTGAAACTCAA ACTTC TTGAGTTTCACTG       TTTAGGTAAACCTGG 100 4
        cysE  258450 ..  258466 +  -6.5  -3.44325   TTATACCTATTTGGT              CGGCATT TAC ATTGCCG              TTAGTTATACCCACT  60 338
AV939_RS01105  265402 ..  265430 + -11.1  -5.28176   TTCGGGTAACAAAAA       GCGGAGGCAGCT GAATAG AG-TGCCTCCGC        TTTTTTGTGCCTAAA 100 115
AV939_RS01125  269603 ..  269631 +  -6.7  -5.45802   ATCGCTAAATAAAGG        CGGTTTTGCGT GTGATTA GCGCTAAACCG        TTTTTATTTTGCCGC  89 45
AV939_RS01130  270262 ..  270287 + -13.3  -5.50723   AAGACATGCTAAAAA         GGGTCGGTGCT GGTA AGTACCGGCCC          TTTTTATTTTAATAG 100 55
AV939_RS01135  271246 ..  271257 +  -4.4  -4.19974   CCAAATTATGAAGGT                TAGG TTTG CCTA                 TTTCTTCAAAGTTTT  64 459
AV939_RS01150  273746 ..  273779 + -13.3   -3.4489   ATTTAACAGTGCGAA     AAAGAAAAACGCGCC GAAA GGCGCGTTTTTTTTC      TTGATTCTAAGCCTT 100 91
AV939_RS01160  278205 ..  278221 +  -2.2  -3.14132   GCTACCCAAGCTAGG              GCGGTA ATTGA TAGCGC              TTAGTAAACAAAACC  43 5
AV939_RS01165  278868 ..  278881 +  -2.4  -3.14211   ATAGTAAATTCATTG               GTGT AAGCAA ACAC                TTAGTCAACAAGGAT  43 20
AV939_RS01170  279853 ..  279885 + -12.8  -3.06915   AATTTAAAATAAGAT      CGTGATCTGCCTAG ACTAA CTGGTCAGATCACG      TTAACTCAACTAAAT  91 115
AV939_RS01180  282533 ..  282547 +  -2.8  -5.04222   TACTATATTATTGAG               GGTAAA CGT TTAACC               TTTTTGGTTTGATTA  70 121
AV939_RS01185 NONE
AV939_RS01190  284877 ..  284903 +   -11  -5.86332   TTACTTGTGCCCCTT         GCGTTGTTTTGA ATT TCAAGATAACGC         TTTTTTTTGCCTTAA 100 75
AV939_RS01195  286636 ..  286649 +  -5.2  -2.52516   AGTGTGTTTGCTTAT               CGCC TTCTAC GGCG                CTTGGTGGTAAAGAC  49 1
AV939_RS01200  287587 ..  287602 +    -9  -5.40474   AATTTTCATGAAAAG              CCCTGT TAAT ACAGGG               TTTTTTTAAGAAAAT 100 66
AV939_RS01245 NONE
AV939_RS01250 NONE
AV939_RS01255 NONE
AV939_RS01260 NONE
AV939_RS01265 NONE
AV939_RS01270  315994 ..  316018 + -14.4  -5.09173   ACGCAAACCTGGCTT          GGCATCGAAC TGAAT GTTCGATGCC          TTTTTTGCGGTGTTA 100 49
AV939_RS01275 NONE
AV939_RS01280  320449 ..  320461 +  -3.3  -5.04987   AACCACAAGAATAGA                GGGCG CGT CGTTC                TTTTTTGCCAGTATT  74 490
AV939_RS01295 NONE
AV939_RS01300  326515 ..  326539 +  -3.5  -3.77177   TTAACGCAACTATCA          CTGGATTAAGT TAT ACGTGACCCAG          TTTAAATCTGTTGCT  53 17
AV939_RS01305 NONE
AV939_RS01310  329250 ..  329270 + -11.2  -5.48054   AAAAAATACAGTAAA            GGCCTAAC CACAT GTTAGGCC            TTTTTTGATTTTGCT 100 69
AV939_RS01315  330509 ..  330526 + -11.3   -5.4477   AAAACAAATAAAAAA             GCGAACC TAGT GGTTCGC              TTTTTTTGAAGCTTT 100 16
AV939_RS01350  342429 ..  342447 +  -4.5  -2.77013   ATTGTGATTGGCATT             GCTGTAG TAGCC CAACAGC             CTTGTTAGCCACGTA  48 103
        glpD  344238 ..  344267 +  -8.7  -5.80817   TATAAAATCTTAACA       GCCCGCATCTTT ACTTCAC AAAG-TGCGGGC       TTTTTTTATGTTCAA 100 49
AV939_RS01360 NONE
AV939_RS01365 NONE
AV939_RS01370 NONE
AV939_RS01375 NONE
AV939_RS01380 NONE
AV939_RS01385 NONE
AV939_RS01390 NONE
AV939_RS01395 NONE
AV939_RS01400 NONE
AV939_RS01405  354425 ..  354435 +    -4  -2.51464   TGTGCTATAACAGTA                 TGTT AAG AACA                 ATTAATGACTGCTAA  44 57
AV939_RS01410 NONE
AV939_RS01415  355699 ..  355709 +  -2.6  -3.40511   CGTAAAGTAGTGATT                 TTTA AAC TAAA                 GTTTTATATTCAATA  47 60
AV939_RS01420 NONE
AV939_RS01425 NONE
AV939_RS01430 NONE
AV939_RS01435 NONE
AV939_RS01440  358883 ..  358894 +  -5.8  -3.14564   TGAGTACAAGGTGCA                GTGG GTTT CCAC                 TTAATCGCAACCTAA  57 130
AV939_RS01445  360101 ..  360118 + -11.3  -4.25053   TGAGTAAACAGGAAA             GGCAACC TTAA GGTTGCC              TTCTTTGTATTATGG  88 34
AV939_RS01450 NONE
AV939_RS01455 NONE
AV939_RS01460 NONE
AV939_RS01465 NONE
AV939_RS01470 NONE
AV939_RS01475 NONE
        tldD  369889 ..  369904 + -11.8   -5.4756   TAAGAATTTGAAAAA              GGCGCC GGTT GGCGCC               TTTTTTATTGCAATT 100 60
AV939_RS01495  374476 ..  374503 + -10.6  -2.62718   GCTTAATTTAAAGAT        TGCCGCT-GGCGA AAT TCGCTGGGCGGCA        TGCCTTGTGACTTTT  76 105
        lacZ  378893 ..  378910 + -12.7    -4.946   GCTACACGAAAAAAA             GCCGCTC TATT GAGCGGC              TTTTTGGTATTTAAT 100 143
AV939_RS01540 NONE
AV939_RS01545 NONE
AV939_RS01550  387488 ..  387511 + -13.2  -5.21709   ACCATTATTCGAAGA          GCCCTGAACA GAAA TGTTCGGGGC           TTTTTTGATCTAGGC 100 37
AV939_RS01560  389280 ..  389294 +  -3.6  -3.61178   TATCCAGAAAGTAAA               TGAGAA TGT TTCTTA               TTTAGAATAACTAAA  53 121
AV939_RS01565 NONE
AV939_RS01570  393047 ..  393078 +  -4.5  -4.59109   AACTGGTAGCCCTGT      TCGGAGGTGGTGAG CATAA CTT-CTACTTCCGA      TTTTTCAGGCGTATG  69 453
AV939_RS01585  395894 ..  395930 +    -6   -3.1485   CCAAATTGGGTACTA   CGC-TTAGTCCATATTG TAAT CAACATTGACTAACGCG    TTGCCTACTTACTTC  57 153
AV939_RS01590 NONE
AV939_RS01595 NONE
AV939_RS01600 NONE
AV939_RS01605 NONE
AV939_RS01610 NONE
AV939_RS01615 NONE
AV939_RS01620 NONE
AV939_RS01625  405396 ..  405414 +  -7.5  -3.71924   TTAATCTATGTTGTC             GCTAAGT TTTCC ACTTAGC             TTGTTAGCTGATTTA  72 52
AV939_RS01630  406086 ..  406102 +  -7.2  -5.09521   CACGTTATATATCAA              GGGTGC TTTAT GCGCCC              TTTTTCATTTCTTGC  85 50
AV939_RS01650  410352 ..  410372 +  -5.4   -4.2243   TACAGAGACTTAGAA            GGCTATGC GTTGA GCATAGGC            TTTTCACGTATTTCT  68 58
AV939_RS01655  411487 ..  411500 +  -5.3  -5.69262   AAAATAAAAGGTAAA               TGCAA ACGT TTGCA                TTTTTATTTTTATCC  95 67
AV939_RS01660 NONE
AV939_RS01665  414379 ..  414393 +  -2.7  -4.33258   TTAAAACAGGGTTAG               CGGCG CTAGT CGCAG               TTTATATTTGGCGCT  58 96
AV939_RS01675  416280 ..  416296 +  -3.7  -5.20735   TAGTATAATCTTTCT              CATTCAA CTC TTGTATG              TTTGTTTTTTGTTCG  76 139
AV939_RS01680  420468 ..  420480 +  -6.3  -2.83522   TTTTACATGTGATTA                GGTTT TTC AAACC                ATTTAATAGACGAGT  54 188
AV939_RS01685  421553 ..  421576 +  -3.3  -4.76644   TTTTTGCCCTTTCGA          GTAATCCTGA ATCTA TCA-GATTAC          TTTTTGGTAAGTGTT  67 466
AV939_RS01690  423441 ..  423460 + -13.6  -5.77988   ATTTAAAATAGAAAA            GCGAAGCC AGTG GGCTTCGC             TTTTTTTATATATAT 100 59
AV939_RS01710 NONE
AV939_RS01715 NONE
AV939_RS01720 NONE
AV939_RS01725 NONE
AV939_RS01730 NONE
AV939_RS01735  433076 ..  433092 +  -5.1  -3.07013   AACGGGTTGGCTAAA              GTAGCTG CAT TAGCTGC              TCTGTTAACAACATC  52 115
AV939_RS01740  433896 ..  433932 +   -11  -5.46657   AGCAATCGATACATA   CTGTCAGCAGGTGCTTT AATG AAAG-ACCTGCTGGCTG    TTTTTTATTGGCCTA 100 87
AV939_RS01750  435829 ..  435854 +  -5.5   -3.0169   TTTTATATTTATTGC         GTAGTCTATTA CCAC TAACGGACTAC          TACTTTATAGGAATT  53 75
AV939_RS01755  438037 ..  438072 + -17.2  -4.41616   AAGATGTGCCTTAGA    GCGCTTAAGTTTGATT GTGA AATCAAACTTAAGTGC     TTTCTTTGAAAGCAT 100 105
AV939_RS01760  440050 ..  440060 +  -5.4  -3.12364   GGGGTTGGATCACCT                 CCTT ACC AAGG                 CTTTATATCTTGAGT  54 17
         rrf  440394 ..  440415 + -14.5  -5.73339   TCCCATTCGAAGAAA           GGGCTATCC TAAC GGATAGCCC            TTTTTTTATGCTTGT 100 74
        acnA  446091 ..  446108 +  -8.4  -5.66684   GCTAAAAGTAAAAAA             GCCCGA TGAATT TCGGGC              TTTTTTTATGAATTA 100 84
        rpsJ NONE
AV939_RS01800 NONE
        rplD NONE
        rplW  451301 ..  451315 +  -2.8  -2.77344   GCGCTGAGTAAGAAG               GGGATT AGA AATGCC               ATTATTGAAAGCTAA  42 30
AV939_RS01815 NONE
AV939_RS01820 NONE
AV939_RS01825 NONE
AV939_RS01830 NONE
AV939_RS01835 NONE
AV939_RS01840 NONE
AV939_RS01845  454371 ..  454400 + -14.5  -3.37612   GACTTTTCTTACAAT       TGAAAAAGCCGCT CTTG AGCGGCTTTTTTA        TTGCTTAAAATTCAA 100 46
AV939_RS01860  458259 ..  458283 + -10.8  -3.02511   CGTTCTCCAGGGAGA         T-GCACCCTGC TTAG GCAGGGTGCCA          TCTTAACCCGCTAGC  79 275
AV939_RS01870  461266 ..  461285 +  -2.1  -3.55814   CATAATGGCTAATTC            CCACG CTTTATACTT CGTGG             TTATATAAGTTCCTA  48 76
AV939_RS01875  462103 ..  462116 +  -8.1  -3.19026   GTAGCTTGTTGTTCT               GTGGC GGTG GCCAC                TTGGGTATTCACATC  64 212
AV939_RS01890  467330 ..  467354 + -15.8  -5.72622   GCACCACAATAAAAA          GCCAGACGAG TCACT CTCGTCTGGC          TTTTTTGTTTATCAC 100 63
AV939_RS01905  472310 ..  472325 +  -3.2  -3.35813   ACGGGCTTGCATCGG              CTTGCC TCAC GCCAAG               TTCATTCCACTGAGC  48 461
AV939_RS01920  476049 ..  476078 +  -3.8  -3.09516   AAAACAGGTAGGCAG       TAAAAAGCAT CCAACTCAAT ATGCTTTTTA        TTGCCTCCTGCAAAG  48 42
AV939_RS01935 NONE
AV939_RS01940  480242 ..  480253 +  -5.8  -3.30474   GACAAGTTTAAAGTG                CCAG CTTG CTGG                 TTCCTCGTTGTGGAG  56 387
AV939_RS01950  481342 ..  481360 +  -4.4  -3.28712   ACGTATTCGAACTGG             CGAGTCAG ACA CAGACGCG             TTGTAAGCCAAAACG  52 1
AV939_RS01955  482707 ..  482724 + -14.1  -5.54079   TATCACCAATCTTAA             GCCCCGC ATCT GCGGGGC              TTTTTTCGTTTTTCA 100 86
AV939_RS01960 NONE
AV939_RS01965  485755 ..  485769 +  -3.4  -4.07568   CTCATAAATTTGGAT               GGGGGC TTT GCGTCC               TTTTACCCGAACCCA  57 291
AV939_RS01990 NONE
AV939_RS01995  494082 ..  494117 +  -3.4  -3.92075   AACACGAGTTATAAA    CAGGTAAACTGTATTTA TTA TTAAT-CTGTTTGCCTG    TTTATGCGTAAAGAT  55 42
AV939_RS02000  495351 ..  495365 +  -4.2  -3.54741   AAGGTCTACCAGCAA               CCCAAT CTC AATGGG               TTTGGGCAAATAGTC  52 430
AV939_RS02010  500697 ..  500721 +  -2.1  -2.66963   TTCCTAAACAATGGT          TGTCGTTGGGT GGG ACTGAACTACA          CTATTATTAATCGTA  40 34
AV939_RS02015 NONE
AV939_RS02020  503458 ..  503479 + -11.7  -3.91144   TTTCCTGACAGAAAA           TAAAAGGGC TTTC GCCCTTTTA            TTTATCGCATATCAG  90 23
AV939_RS02065  513375 ..  513396 +  -8.7  -5.63374   TGTCTGAAATTAAAA           GCCTGATGC GTAC GTGTCAGGC            TTTTTTTACTATTGG 100 82
AV939_RS02070 NONE
AV939_RS02075  514239 ..  514253 +    -7  -5.09426   TGATTCGACACCAAC               ACGGGG ATC CCCCGC               TTTTTTGCGGTTCGC  84 228
AV939_RS02125  525987 ..  526006 +  -6.4  -2.77182   GCGTGCAAAAGCACG            CTCAGCAG GTTG CTGCTAAG             TGATTGCCTGTAAAA  57 47
AV939_RS02130  527760 ..  527775 + -10.4  -5.66684   TAAAAGTCTACGAGA              GCAGCC CTAG GGCTGC               TTTTTTTATCCCTTC 100 57
AV939_RS02135  529447 ..  529457 +  -6.8  -4.04397   CTGGTAAATGTGTTG                 CTGC TTT GCAG                 TCTTTTTATGAGCGT  71 108
AV939_RS02145 NONE
AV939_RS02150  532925 ..  532939 +   -10   -4.5287   CTCAAAGTAGCTTTC               GCACCA GGT TGGTGC               TTTTAGTTAATTTCA  89 108
AV939_RS02155  534178 ..  534198 + -15.5   -5.0065   TGATATCTATAATTA            CAAGCGCAC GGT GTGCGCTTG            TTTTCTTTGTGAGTC 100 98
AV939_RS02160  537315 ..  537329 +  -7.2  -2.87344   GCTCACCCATGCCGA               CTAAGT GAG ACTTAG               TGTGTCCGAAAAGTA  59 362
AV939_RS02205  547922 ..  547941 + -12.8  -3.09933   GCCTAATTTTTAAGC            GTGGCGGC GCTA GCCGCCGC             TTACATCACTTAAGC  91 28
AV939_RS02215 NONE
AV939_RS02220  550965 ..  550987 + -12.8  -3.95986   CCAGTACAAAAAAAA           GACGCAAACT AAA GGTTTGCGTC           TTTGCTTACGTTCCA 100 14
AV939_RS02230 NONE
AV939_RS02235 NONE
AV939_RS02240  555261 ..  555285 + -15.8   -3.3506   GCGCGTAAAATAGCG          CGAATGGGCG ATGAG CGCCCATTCG          TTATCGCCATTTAAA 100 33
AV939_RS02245  555812 ..  555833 +  -9.4  -5.10933   CTAGACATAAAAAAA           CGCGCAGT GTTGAA GCTGCGCG            TTTTGTTTTAAGTGG  91 37
AV939_RS02270  559775 ..  559799 +  -2.9  -3.98859   GGAGGAGGCGGTGGT          TTGCCGA TACCCGCTAAT TCGGCAA          TATTTTTACCTTCAA  54 242
AV939_RS02280  561358 ..  561368 +  -5.4  -3.27994   GTTATATTATAACGT                 CTCT GGC AGAG                 TTACTCTGCGGTTAC  56 220
AV939_RS02285  562022 ..  562035 +  -6.7  -2.51045   CGGTTACACCCCAAA               GCTTC AATT GAAGC                ATATCTTCTGGCTCG  54 154
AV939_RS02310  566396 ..  566412 +  -6.6  -3.00081   TTGTACAATGCGCAC              CACTTC AAAAC GAAGTG              CCTTTTTTTGTATGC  58 100
AV939_RS02315 NONE
AV939_RS02320  566880 ..  566894 +  -2.2  -3.95584   TATCTTAGTCATCAA               TTGAAA CTA TTTTAA               TTTGATTAATGCGAC  52 261
AV939_RS02325  569973 ..  569990 + -11.3  -5.49809   ATAGTACTTATTAAA             GGCACTC CATG GAGTGCC              TTTTTTTCAGGTTTA 100 52
AV939_RS02330 NONE
AV939_RS02335  572302 ..  572323 +  -8.7  -3.60525   GCGTTAGTACTAAGT           GTGCGTTAC TTAT GTAGCGCGC            TTCTCTATCGGTGCA  74 71
AV939_RS02340  572981 ..  572996 +    -4  -3.26262   AATTATCTTGAATAT              TGGGAT ATAT ATCTCA               CTTTTGTGCGGTTTG  49 109
AV939_RS02345 NONE
        ilvH  575355 ..  575378 + -15.4  -4.21194   TGATAATGTACCAAA          GGCGAGTAAC GAAA GTTACTCGCC           TTTTCCGTAATAGGC 100 65
AV939_RS02360  576754 ..  576770 +  -3.7  -3.06341   CGTTAAAGAAAAATC              CTGATGT TTG ACATTGG              CTTTTGGGAGCTATT  48 22
AV939_RS02365 NONE
AV939_RS02370 NONE
AV939_RS02375 NONE
AV939_RS02380 NONE
AV939_RS02385 NONE
AV939_RS02390  582111 ..  582137 + -10.9  -6.01369   AGTTGCTAAAAAAAA         TGGGATGCTAC CTAAA GTCGCATCCCA         TTTTTTTATTATTTA 100 86
AV939_RS02405  585450 ..  585468 + -12.4  -5.63517   GCAGTATAGAAAAAA             CCGGTGGC CTA GCTACCGG             TTTTTTATTTACCCA 100 48
         rho  586989 ..  587002 +  -9.5  -5.60993   GTTTTTATAGAAAAA               GCGCC TCAG GGCGC                TTTTTTTGTGCCCGC 100 44
AV939_RS02415 NONE
AV939_RS02420  591289 ..  591304 +  -2.5   -3.6003   ATCGACAGTATTGCC              CGTGA ACTTGC TCGCG               TTTGAGGCTACTTTA  49 5
AV939_RS02430 NONE
AV939_RS02435  594404 ..  594426 + -10.8  -3.43961   GGCGAGGCAAAACGT           TTAAAAGGTT GAC AACCTTTTAA           TTGTGGCTATTATAC  83 14
AV939_RS02440  594626 ..  594637 +  -5.8  -2.67441   CCTCGTTATCGTTTT                TCCC TTTC GGGA                 TACATTTCCAGTTTT  54 99
AV939_RS02445  595293 ..  595310 +  -5.6  -2.57721   ATTAAGGTAAGATTT             GAATGG TATTCC CCATTC              TAAATTAGTGAATTA  51 109
AV939_RS02450 NONE
AV939_RS02455  597046 ..  597084 +    -6  -6.04324   TTTAAAATTCAAAAA  GCCAG-CGTACAGGGGG TTATTT CACTGTGTACGTCTGGC   TTTTTTGTTTTTTAA 100 86
AV939_RS02465  598718 ..  598732 +  -3.6   -4.4009   AGAGCGTTTTAGCCC               TTTAGT AAT GCTAAA               TTTTATAGCGTCAAC  62 241
AV939_RS02475 NONE
AV939_RS02480  600924 ..  600950 + -19.6  -5.36441   TTAGGCTATTTGAAA         GCCCGGTACTTA TTT TAAGTACCGGGC         TTTTTTGTGTAGGCA 100 56
AV939_RS02485 NONE
AV939_RS02490  603167 ..  603177 +  -3.2  -3.67792   TTCTTACACGAAGTA                 CGCT ACC AGTG                 TTTGGATCGATATAA  51 225
AV939_RS02510  609335 ..  609354 +  -3.6  -3.28712   CTATACGGCGAAAAA            CTAAGTTA ATTG TGACTTGG             TTATAAGAAAAAACG  49 184
AV939_RS02515  610522 ..  610533 +  -5.8  -3.90588   CCTGACTGGCAAGCG                GTGC CAGT GCAC                 TTTCGTTCAGCCCTG  63 121
AV939_RS02535  617579 ..  617599 +    -4  -5.22039   GAAATAATATAAAAA           CTCGGC-AT TAAT ATGGCCGGG            TTTTTTACGTTTAGC  76 320
AV939_RS02555 NONE
AV939_RS02560  621463 ..  621478 +    -9  -4.73682   AAAGGCGTTAAAAAA              GGAGAG CATG CTCTCC               TTTTCTATTATGCGC  88 87
AV939_RS02570  624781 ..  624793 +  -3.3  -4.05446   AGGTATACTCCTTAA                CCGCT TCT AGCAG                TTTGTGATTAAAGGA  57 107
AV939_RS02575  626370 ..  626380 +  -5.4  -4.17048   GTTTTCCACTAACAA                 GCTA TCC TAGC                 TTCTTTTGCCAAAAC  65 318
AV939_RS02600  629348 ..  629371 + -11.8  -3.82262   AATAAGTAGCAGCAA          TAACGGGGGA GTGA TCCTCCGTTA           TTATTCCTTCGAATT  86 55
AV939_RS02660  636043 ..  636054 +  -7.2  -2.57344   GACGCATACACGCGG                GGCG GCTT CGCC                 ATTATGCCCCACATG  59 97
AV939_RS02665  636502 ..  636514 +  -4.1  -2.68071   TGTTCAAGCGGGACT                GCTAA CAG TTGGC                TCGGTTTCGCTTCGC  45 59
AV939_RS02670  637403 ..  637415 +  -6.2  -3.86822   CTAACTTCAAAGGTT                GCGC ATTAG GCGC                TTTATCGCCAAGTTC  64 276
AV939_RS02675 NONE
AV939_RS02680 NONE
AV939_RS02715  643446 ..  643457 +  -7.2  -2.57344   GACGCATACACGCGG                GGCG GCTT CGCC                 ATTATGCCCCACATG  59 424
AV939_RS02720 NONE
AV939_RS02725  644551 ..  644563 +  -6.3  -2.78384   CAATTTTTTGCCGCT                TAACG TGG CGTTA                TATGCTAAGAAGGAA  54 120
AV939_RS02730  644950 ..  644965 +  -7.5  -3.66288   GCCTACGTGTTATTG              CCCCC TTATTT GGGGG               TTATGTTGCGGGGTA  70 127
AV939_RS02735  645474 ..  645490 +  -6.5  -3.68757   TAGCCCATGTGTTAT              CGCCC CTTAGTT GGGCG              TTATGTGCTTTTCAG  65 102
AV939_RS02740  645840 ..  645891 +  -9.4   -2.7782   TCACTGCGTTCGCTG GGACGCATACACGTGGGGCG GCTTCGCCATTA TGCCCCACATGTCTGCGCCC GTTATTGGAAAGTTA  72 148
AV939_RS02745  646298 ..  646349 +  -2.8   -2.7782   TCACTACGTTCGCTG GGACGCATACACGCGGGGCA GCTTCGCCATTA TGCCCCACATGTCCGCGCCC GTTATTGGAAAGTTA  42 73
AV939_RS02750  646695 ..  646709 +  -5.7  -3.99775   AAAATTAGTTCAGCT               CCTTG TAAAT CAAGG               TTGTTCTTAGTGAGT  63 1
AV939_RS02755  647147 ..  647205 + -15.4  -3.76373   GGCGCCCGCAAGCGG GCTGGGACACAAACAGGCAGGCGG CTTCGCCATTT TCGCCTGCCTGTTTGTGCCCCATA TTTAGGTGTTAGAAG 100 63
AV939_RS02785  651469 ..  651488 +   -10  -3.05012   TGCGTGTTTGCGTCC            CA-GCCCGC GCA GCGGGCGTG            CTTAATTTTTTTGTT  75 303
AV939_RS02800  653125 ..  653137 + -10.5  -4.09864   CTTGTGGCCCCGAAA                GGGGC CAC GCCCC                TTTTCCAACATCGCT  85 106
AV939_RS02825  660459 ..  660475 +  -2.9  -2.88404   ACTGGACAAGCTTAA              GGAACCA CCA TGGATTC              ATTGTTAGATTTTAG  42 26
AV939_RS02830  661368 ..  661389 + -13.1  -2.85361   ACAAAACCTTCGGAC           GAAGCGACT TGTT AGTCGCTTC            TGACTTTTTACCTAA  93 161
AV939_RS02835 NONE
AV939_RS02840  662501 ..  662520 +  -2.8  -4.41895   ATTTTAAAACCCTAC            GGCGTAAT AACC ATTTTGCC             TTTTACTTCGCGGTT  60 157
AV939_RS02865 NONE
AV939_RS02885  673935 ..  673970 +  -8.4  -3.64236   GCACATCTACTGAAG    CTTGAACCTGG-CCATC ACG GATAAACCAGGTTCAAG    TTTCAACCTTTCAAT  73 183
AV939_RS02925  679824 ..  679848 +  -2.2  -2.78712   TCCATCACCCAAGTG         TG-TTACGCAA GTAC TTGCGAAAGCA          TCATTAACTTACAAC  41 77
AV939_RS02930  681041 ..  681058 +    -7  -2.68823   TAATTCGCGTGGTTG             CTTGCG AGATTG CGCAAG              ATTATATAGGAGCAC  59 47
AV939_RS02950  684877 ..  684928 +  -9.3  -3.94402   CTCACTTCGTTCGCT GGGACGCATACACGTGGGCTG CTTCGCATTT TAGCCCACGCGCCTGCGCCCC TTATTTAAAAGTTAT  81 57
AV939_RS02955  685537 ..  685553 +  -7.2  -3.09015   TAGCCCATGTATTAT              CGCCCC TTAGT GGGGTG              TTAGGTAGCTATGGA  62 113
AV939_RS02960  685996 ..  686010 +  -5.6  -2.88571   AGCAAACTATTATCA               GCCCCT TAA ATGGGC               GTTATATTTCAGAAG  52 110
AV939_RS02965  686372 ..  686383 +  -7.2  -2.57344   GACGCATACACGCGG                GGCG GCTT CGCC                 ATTATGCCCCACATG  59 118
AV939_RS02970  687815 ..  687832 +  -3.3  -3.65812   TAGCCCATATATTTG             TGCCCCA AAGT TGAGGCG              TTATATTCACAAGGA  51 120
AV939_RS02975  688614 ..  688667 +  -7.3     -3.94   CTCACTACGTTCGCT GGGACGCATACATGCGGGGCG GCTTCGCCATTA TGCCCCACATGCCTGCGCCCC TTATTTAAAAGTTAG  72 63
AV939_RS02980  689390 ..  689400 +  -5.4  -5.45802   ACTGTACTTAAGTAC                 GGAA TAT TTCC                 TTTTTATTTTACGCA  83 309
AV939_RS02985  690488 ..  690501 +  -9.5   -4.2558   CCAATCAACAAAAAA               GGGCC CGAA GGCCC                TTTTAATAAAACGTG  85 74
AV939_RS03000  696397 ..  696420 + -10.2  -2.92026   CATTAGTGGATACAA          GCCACTCGGT GAAA GCCGAGCGGC           TATCGTGTTACACTC  75 52
AV939_RS03005  698012 ..  698032 +    -4   -5.3236   TCAGTAATAGAAAAA           GGCAGC-CA GTTT TGAGCTGTC            TTTTTTATGGCTTCT  76 102
AV939_RS03010  698829 ..  698844 +    -9  -3.29829   CTTGAGGGGGGCTAA              CGCACT AGCT AGTGCG               TTCTACCGAAATATG  72 26
        rplU NONE
        rpmA  701155 ..  701170 + -11.8  -5.86976   ACAGGCTTAGAAAAA              CCCCGC GCTT GCGGGG               TTTTTTGTTTTATGG 100 61
        obgE  702505 ..  702528 +   -14   -5.4505   TGAACAACATTAAAA          CCGCTAGTTT GCTA AAACTAGCGG           TTTTTTGTTAAAAGC 100 42
AV939_RS03060  705299 ..  705324 +  -7.6  -3.65425   TGCTACAAATAAAAA         TGCCGAGG ACAAACAACG CCTCGGCA          TTTAACGTATGTAAC  70 41
        putA  719704 ..  719722 + -10.3  -5.99154   CGGTAACCATGTAAA             GCCAGTC CTTGT GACTGGC             TTTTTTTATTTCATA 100 70
AV939_RS03125 NONE
AV939_RS03130 NONE
AV939_RS03135 NONE
AV939_RS03140  726461 ..  726471 +  -2.4    -3.889   CAGTGGTTTTTACCT                 CGCC GAG GACG                 TTTGATATGGTTAAA  52 10
AV939_RS03145  727832 ..  727863 + -15.4  -3.60098   TTAACAGGCTAGATT      TAAAATAAGCGGCT AAGA AGCCGCTTATTTTG       TTTAACCTCGACAAT 100 66
AV939_RS03155 NONE
AV939_RS03160  731484 ..  731505 +  -2.9   -3.2963   CGCTGGCAGCCTTAG           GTCGAAGGTG CAA CGCCT-CGCC           TTGTCGAGAAGTGAT  46 193
AV939_RS03170 NONE
AV939_RS03175  735054 ..  735072 +    -6  -4.04719   AAAATAGGTATGGCG             CTAGCAGT GTA AATGCTAG             TTTCTGCTGTGTGAT  68 39
AV939_RS03180 NONE
AV939_RS03185 NONE
AV939_RS03190 NONE
AV939_RS03195 NONE
AV939_RS03200  739624 ..  739653 +  -3.7  -2.68279   CGGTAGCTTCAGACA       GAGTTGGTAGTG CGCTTAT TAC-ACCAACTC       TGCGTTTACTCCCTA  45 95
AV939_RS03235  750415 ..  750447 + -19.3  -3.72324   AGCTTGCTAATAATG      GTTTGCCTTGGGGGA ATT TCCCCCAAGGCAAAA      TTATTGATAAGCGTA 100 47
AV939_RS03275 NONE
AV939_RS03280  764056 ..  764067 +  -3.6    -3.737   AGATGCGCTGGCTAG                CGTG AAAG CGCG                 TTTCCTAGCCAATTG  55 46
AV939_RS03285  765283 ..  765293 +  -5.4   -3.1506   ATGAAGTTTTCAGGG                 CAGT ACT ACTG                 TTGATGGAGGCATTT  54 129
AV939_RS03290  766160 ..  766171 +  -4.4  -3.34894   TCTTTTTCCAGTAAG                GCAT GGTA ATGC                 TATTTAAAGCCCATT  52 17
AV939_RS03295  767637 ..  767651 +  -7.8  -3.33815   AAAACCCGTAATGTC               GCGGAG GCT TTCCGC               TTAATTGGAGAAGAT  67 49
AV939_RS03300 NONE
AV939_RS03305 NONE
AV939_RS03310 NONE
AV939_RS03315 NONE
AV939_RS03320  773320 ..  773358 + -11.9  -4.15222   TGCTAGCATTACGGG   GAGTTAAGCAAACGTTT TAAGT AAACGTTTGCTTATCAC   TTTGTTAGAACGGAT  95 35
AV939_RS03330  775275 ..  775295 +  -8.3   -4.2717   CAATATCACGATGCT            CCTCTACCA GCT TGCTAGAGG            TTTTAATGCGCTGAT  80 162
AV939_RS03340  778453 ..  778480 + -18.6  -5.46276   GGCTCGTTATTCATA        GCTTGGCCTTGT CTAT ACAAGGCCAAGC         TTTTTTATATGTGTT 100 135
AV939_RS03350 NONE
AV939_RS03355  784345 ..  784362 + -11.3  -3.35996   AAATAGCAAAAAAAA             CGGCAAG GTAA CTTGCCG              TTGTAGATAACCATA  82 15
AV939_RS03390 NONE
AV939_RS03395  802518 ..  802530 +  -3.4  -2.80622   ATTGTTAACAAAGTG                GTTC GATTG GAAC                TCTGCTGAAGTGTCT  44 213
AV939_RS03400 NONE
AV939_RS03405 NONE
AV939_RS03410  807312 ..  807334 +  -2.6  -3.60234   CATATTGTTTGCTAT           CACCTGCC TGCTCAT GGCGTGTG           TTTCACAATATATAG  49 69
AV939_RS03415  808252 ..  808269 +  -3.3  -4.64766   CAAGCTTAATGAACA             CCGGTTG ATAG CGACAGG              TTTTTAACCTGTCGC  64 77
AV939_RS03430 NONE
AV939_RS03435  816502 ..  816516 +    -5   -2.5055   TGATAGCGGCCAGTA               GAAATG TAG CGTTTC               GTATCTTCTGAAATG  48 188
AV939_RS03455  823929 ..  823949 +  -3.3  -3.72968   CAAGTTATTGGTTAC            TTAAAAGCT AGT AGCTATTGA            TTTAACTATAATAAT  53 41
        nudF NONE
AV939_RS03475 NONE
AV939_RS03480 NONE
AV939_RS03485  829308 ..  829320 +  -2.7  -4.23794   GAGGGTAGGCAAGCC                TTGGT AAC ATCAA                TTTATCTTGCGTTGC  58 133
AV939_RS03490  831304 ..  831325 +  -9.5  -3.49938   TTTGTTCGCCTGATA           GCCATATTG GTAT CGATATGGC            TTATACCTTGTTTGA  77 43
AV939_RS03495 NONE
AV939_RS03500  837860 ..  837880 +  -6.8  -5.09426   CTGACCATCTATCAA            GGGCCTCC TGATT GGAGGTTC            TTTTTTCCAGTTCAG  83 50
AV939_RS03505  838651 ..  838667 +  -2.3  -2.82884   AGAGATCACAGGTCG              CTAGT CATAAAC ACTAG              ATTTAGCTACTATTT  41 22
AV939_RS03510  840296 ..  840307 +  -2.2  -4.15849   TTTTTAACAAGTGCA                GGTA GTGC TGCC                 TTTGCTTCTTCTTCT  57 215
AV939_RS03520  840942 ..  840972 + -10.4  -2.89055   ATGTAACTGTAAGTC       GATGGGCGTTTTGC CAG GCTGAGCGCCTATC       TCTCTAACGAGTTTA  76 49
AV939_RS03530  842654 ..  842682 + -10.3  -3.87815   AAGCGTTATTCGCCA        GACTAAGCCCAAG AAT CTTGAGCTTAGGC        TTTGTAAGCATAGGC  85 127
AV939_RS03535  843760 ..  843781 +  -2.3  -3.79687   TTTCCAGTGAGTAGG           GCGTAAG TTTCACTC TTTACGC            TATTTTCTACCCAGT  50 20
AV939_RS03540  846481 ..  846492 +  -5.8  -3.62775   TTGATAGACGTAAAA                GCAG CAGA CTGC                 TTATTAGCAAATACT  62 65
AV939_RS03545 NONE
AV939_RS03550  847875 ..  847892 +    -4  -4.04326   CCAAAAACCGCATAG             CCCCAG TCTCGT CCGGGG              TTTAATGTTTCGTTG  59 173
AV939_RS03565 NONE
AV939_RS03570 NONE
AV939_RS03575  851354 ..  851371 +  -4.1  -3.40043   CATTCGAAATAACAC             CTAGCTT TCTC ATGCTAG              CTTTTCTATGTTGGC  51 29
AV939_RS03580  852447 ..  852463 +  -3.7  -5.01811   CATCGGTAAAGCTTT              CAATCAA CCG TTGATGG              TTTTTCATTTCATGA  74 427
AV939_RS03595  856113 ..  856140 + -15.6  -5.93809   TTGATAGGCAACGAA        GCCCGCAACAAC GAAA GTTGATGCGGGC         TTTTTTTTGTCCCGA 100 320
AV939_RS03600  858702 ..  858716 +  -2.1  -3.72576   GTGCCGACAACCTCA               TTGCG GTTGA CGTAA               TTTAATAAGGAACAA  50 6
AV939_RS03605 NONE
AV939_RS03610 NONE
AV939_RS03615 NONE
AV939_RS03620  863910 ..  863938 +  -9.7  -3.20348   ACACTTCCATTTGCC        CAGCATTAGGC CATTTGT GTCTAATGCTG        TTGCCTATTAATCAA  76 17
AV939_RS03625  865804 ..  865841 +  -8.5  -6.11644   GGCTCGGCATCGAAG  CCCACCAAGCG-CGACG TTTATT CGTCTACGCT-GGTGGG   TTTTTTTTTGGCTAA 100 395
AV939_RS03630  867273 ..  867286 +  -5.3  -3.58343   GGCTAAAGGGTGAAA               CTGTT CTTT AACAG                TTTCACAGTCATACA  59 15
AV939_RS03635 NONE
AV939_RS03640  869203 ..  869213 +  -6.8   -2.9162   CGCTGCTTGAGTTAG                 GCGT TTA ACGC                 TAATTTAAAGCGTTA  58 31
AV939_RS03645  870776 ..  870803 + -17.2   -5.3236   AAGACTTATAAAAAA        GGTGCTAGAGAA CAGA TTCTCTAGCACC         TTTTTTGTCGCTTAT 100 154
AV939_RS03675 NONE
AV939_RS03680  878581 ..  878596 + -10.4  -5.38497   ATATGAATAAGAAAA              CCGCCT ATAC AGGCGG               TTTTTTAGTTTAACT 100 76
AV939_RS03690 NONE
AV939_RS03695  882361 ..  882373 +  -4.8  -3.71873   AGTTGATGGTGGGCC                GCCA CTGTC TGGC                TTTCAATATGAATAA  59 147
AV939_RS03725  887887 ..  887908 +  -2.2   -3.5365   CGTTCTTAACCGTAA           CAACGAGG GTTAAG CCATGTTG            TTATCTGACATTTCA  46 13
AV939_RS03730  891257 ..  891271 +  -3.5  -4.16443   ACGTATGAATTTTTA              CGC-CC TTTC GGTGCG               TTTATCCTTTAGTCT  57 269
AV939_RS03735 NONE
AV939_RS03740  893158 ..  893191 + -14.7  -3.56864   CATTTATTACTGTCG     TTTTGGCCCCGCTCA GCAA TGAGTGGGGCTAAGA      TATTTCTAAAGTTTT 100 45
AV939_RS03745  895092 ..  895111 +  -9.3  -5.27769   CTCAAAATAAAAAAA            TCCCCTG ACGAAG CAGGGGA             TTTTTAATTTTTTAT 100 209
AV939_RS03770  901675 ..  901700 +    -2  -3.85698   GGTAGGGTTATTATG         CTAAATAAAA AGAGTA TCTTATTTAG          TTTGTAGGAAAAAAC  50 55
AV939_RS03775 NONE
AV939_RS03785 NONE
AV939_RS03790 NONE
AV939_RS03795  905618 ..  905640 +    -7  -2.54566   GCGTAATACAATGGA           GCGATTTCCT TTT AGGGAGTTGC           CTCTTATGAAGTATT  59 80
AV939_RS03800  906114 ..  906146 + -13.6  -2.95358   CGATGAGTTTAATAA      CCAGTTAGTTGCTT AACAC GGGCAACTAACTGG      CTTAGTTTTTATTGA  95 71
AV939_RS03810  909158 ..  909175 + -11.3  -5.80003   GCATGACTACCTAAA             GCCGAAC TTAT GTTCGGC              TTTTTTGTTTGTTAC 100 67
AV939_RS03820  911152 ..  911186 +   -10  -2.59569   GCAAAGTTAAACAAA     ATGTTGAGCAATACCC ATG GGGCACTGCTCAACAC     GTATTAATTTCACGC  74 116
AV939_RS03835  914865 ..  914883 + -13.2  -3.12847   ATTCCCAGCGGATAA             GAGACGCT ATT AGCGTCTC             TTCGCTCTCCGCGTT  95 41
        phoR  916208 ..  916218 +  -5.4  -2.78996   TAGATAAAGAGTTAA                 TTGC GGA GCAA                 ATTTAAATGCGAATA  52 9
AV939_RS03845  917211 ..  917221 +  -3.2  -3.73775   AAACAGGTGAATAAC                 CGTG GAG CATG                 TTTCATCACGCTGGA  53 49
AV939_RS03850  918136 ..  918147 +  -4.4  -3.86015   TTCCAAAAATTTCAG                TGTG AATC CACA                 TTTGTAACAAAAATG  57 140
AV939_RS03855  922324 ..  922347 + -16.8  -4.66537   TCGTCATTCATTGAA          GCTAAGGCGC TTGT GCGCCTTAGC           TTTTGTGTTGAAAGG 100 48
AV939_RS03860  925102 ..  925119 + -12.7  -5.06816   CTTCTAATTTAAAAA             GCCCGGA ATTG TCCGGGC              TTTTTATTGCGCGAT 100 34
AV939_RS03865 NONE
AV939_RS03870 NONE
AV939_RS03875 NONE
AV939_RS03880 NONE
AV939_RS03885 NONE
AV939_RS03890  930332 ..  930361 +  -7.8   -5.4659   ATCGCGATAACAAAA       CGCCGTAGGCATC TAAAC GA-GCCGGCGGCG       TTTTTGTTTGTGTTG 100 69
AV939_RS03920  939630 ..  939646 +  -4.5  -4.94109   GATCGTTTTCCTAAC              TCAATGA TAA TTATTGA              TTATTTTTTGTTTTA  73 207
AV939_RS03925  942740 ..  942759 + -13.6  -5.43414   ATATTTAGTGTGAAA            GCCCCAAC TTCG GTTGGGGC             TTTTTTATATCTCCT 100 67
AV939_RS03930  944008 ..  944020 +  -2.7   -2.7644   TAAGGTTTTATTTCT                CTGTT TTT AATAG                CTTTAACCGTTCAAT  42 183
AV939_RS03935  946833 ..  946855 + -12.7  -5.66684   TGTATAAACTACAAA           GCCGGGCAC CGTAA GTGTCCGGC           TTTTTTTATGGGTTA 100 46
AV939_RS03940 NONE
AV939_RS03945  948784 ..  948803 + -12.2  -4.98531   TTCACAGACAAAAAA            GGGAAGGT GTTA ACCTTCCC             TTTTTCATTTAAAGC 100 55
AV939_RS03985 NONE
AV939_RS03990  959988 ..  960000 +  -6.2  -3.10879   GCAAACTTCAGTGTT                CCCC AGCGA GGGG                TGTGTTAGCATTGCT  57 58
AV939_RS03995  960885 ..  960921 +  -5.9   -5.5208   TTAATTTTTTAAAAA   CGCACCATAGCAAAAG GTAATG CTTAGGCTA-GGTGCG    TTTTTTATGTTCTCA  89 49
AV939_RS04000 NONE
AV939_RS04005 NONE
AV939_RS04010 NONE
AV939_RS04015 NONE
AV939_RS04020 NONE
AV939_RS04025 NONE
        relA NONE
AV939_RS04035  969772 ..  969785 +  -5.2  -5.26119   CTCTGCGCCCTTTAT               CCGC AATAGG GCGG                TTTTGTTTTTCAGGC  82 118
AV939_RS04050 NONE
AV939_RS04055  972477 ..  972506 + -13.7  -4.47551   ATTTTACGTTTTATG       CAAAAAACCCGGC TTTC GCCGGGTTTTTTA        TTTTCTGGCTTAAAT 100 40
AV939_RS04060 NONE
AV939_RS04065 NONE
AV939_RS04070  977378 ..  977399 +  -6.5   -4.0031   CCACATCATAAAAAG           GCGCTTACT ATTA GGTGGGCGC            TTATTTCATGGAGAT  69 61
AV939_RS04075 NONE
AV939_RS04080  980205 ..  980225 + -10.5   -4.0219   AATATTACTAAGAGA            TTTGGCCGA ATT TCGGTCAAA            TTCTTGATTTTATTC  85 84
AV939_RS04085 NONE
AV939_RS04090 NONE
AV939_RS04095  983155 ..  983171 + -10.8  -5.32699   ATGTATAATAGCAAA              GGGGGC TTCTC GCCCCC              TTTTTTAGTATTTGA 100 53
        sspA NONE
AV939_RS04105  984327 ..  984357 + -15.6  -3.05054   TATTAAATAAGCATT       CTGACTTTCTGCTG CCT TAGCAGGAAGTCAG       CTTATTCTTTACCAT 100 31
AV939_RS04110 NONE
AV939_RS04115 NONE
AV939_RS04120  988227 ..  988246 +    -5  -3.16191   ACGTTTCATGATGAG            TGGCAAGGT AGC GCCT-GCCA            TTGCTGCGGCTATCA  52 183
AV939_RS04185 NONE
AV939_RS04190 NONE
AV939_RS04195  999960 ..  999979 +  -4.4   -3.2059   AAAGACCTGATGAAA            CCT-AAAAG GGA CTTTTCAGG            TCTGTTGTAATAAGT  50 67
AV939_RS04200 NONE
AV939_RS04205 NONE
AV939_RS04210 NONE
AV939_RS04215 1002632 .. 1002661 + -12.3  -5.59879   GCTTATAGAAAAAAA       GGCGCCT-ATGATG GTT TATCATAAGGCGCC       TTTTTTGTGTTTGTG 100 91
AV939_RS04235 1007311 .. 1007323 +  -9.1  -3.26712   ATAAAAACAGCGAGA                GTGCC CGT GGCAC                TGTATTGTTGGGCAT  72 44
AV939_RS04240 1008165 .. 1008182 + -11.3  -5.76237   CTACGTTATTTAAAG             GCCCTCT ATTT AGAGGGC              TTTTTTGTTTGTGTA 100 55
AV939_RS04250 1010699 .. 1010710 +  -4.4  -3.60627   ATGTTTAGCACGTTT                GCTT CTCG AAGC                 TTTGCCATAAGGTCG  55 180
AV939_RS04260 1011663 .. 1011680 +  -9.1  -3.81575   CCTTACTGATATCAC             GCGCTGC ACTT GCAGTGC              TTCTCATTTTTTAAA  76 43
AV939_RS04265 1014352 .. 1014366 +   -10  -3.64682   ATCGAAATAGGTAGG               GCGGTA AAA TACCGC               TTTGCCCATTTCATC  80 49
AV939_RS04270 1015933 .. 1015957 +  -5.5  -3.72576   CATGTAGAATGCGCC          GCGGAGTTGGC CAG GCAATCGCCGC          TTTCGTAAGAAAGGG  62 77
        rnpB 1016291 .. 1016320 + -13.7  -4.42062   ACTCCACCTTTATTT       GTGTAAGTGAAGC GTCT GCTTCACTTACCC        TTTCTTTAAGCGCTC 100 32
AV939_RS04300 1024818 .. 1024829 +  -2.2   -4.0371   AATACCTATCTAAAA                GTGG ACTA TCAC                 TTTATATACAGCCTG  54 39
AV939_RS04305 1025758 .. 1025778 +  -5.4  -2.96979   TATTGCAAAGGTGAG            TGAGTCGT ATTAA ACGACGCA            TATACTTGCTGTTCA  51 235
AV939_RS04315 1026992 .. 1027023 + -18.2  -5.14985   ATCTGAAATTAAAAA      GGGTCGCTTTACTT TATA AAGTGAAGCGACCC       TTTTTCTGTCTTTAG 100 126
AV939_RS04325 1030601 .. 1030616 +  -5.4  -3.05596   ACTGATGCAGTGGTA              GAGGCA GCAT TGTCTC               TTAGCTAACGAGGTC  54 2
        gapA 1031664 .. 1031696 + -20.7  -3.64049   CTAATTAAGAATTTT      GCTGCCAAGGTTGGT AGC GCCAGCCTTGGCAGC      TTTCACAGTTATTCG 100 37
AV939_RS04335 1032990 .. 1033004 +  -6.4  -3.21276   CGATAAACCCTACAC               CTGTTC TTA GAGCAG               TATTATAAAAAAGGA  60 110
AV939_RS04340 1033944 .. 1033960 + -13.7  -5.49234   CTTTATTATTGAAAG              GGGCGCT GAG AGCGCCC              TTTTTTGTTAGCTAT 100 42
AV939_RS04345 1036517 .. 1036534 + -11.3  -5.29445   CGTAAAACGCAAAAA             GGGAGCA TTAA TGCTCCC              TTTTTATTCTTCGCA 100 70
AV939_RS04365 1043277 .. 1043290 +  -2.5  -4.18197   CTACGCAGTAGATCT               TATTA TGAA TAATA                TTTTCAATGGAGGCT  55 14
AV939_RS04370 NONE
        pstB NONE
AV939_RS04380 1046473 .. 1046483 +    -4  -2.97109   TACTTGCCCAAATTA                 TCAT CGT ATGA                 ATTTAATTCCGTTGC  47 72
AV939_RS04385 1048007 .. 1048035 + -14.7  -4.65895   ATTAAAGCTTGAAAA        CAAAAAACCGCGT TAA ACGCGGTTTTTCG        TTTTTAAATAACGCG 100 47
AV939_RS04395 1050215 .. 1050247 + -10.7  -2.74563   CCCTTAAATAATGTT      TTTGGCGAAAAAGTT TCA AACTTTTTCGCCCAC      TGCTTCGACTCTAAG  76 30
AV939_RS04400 NONE
AV939_RS04405 NONE
AV939_RS04410 1052600 .. 1052626 +  -6.6  -2.70298   CAAAGCGTCATTAAG        GGGCGGTATGA CCAAGC TC-TGCCGCCC         ATTGTAGTTCACCGC  56 141
AV939_RS04450 NONE
AV939_RS04455 1063386 .. 1063401 + -10.4  -5.79595   TGAAAACGTAAAAAA              GCTGCC AAAT GGCAGC               TTTTTTCTTTTAGAC 100 48
AV939_RS04465 1066908 .. 1066951 + -13.3  -3.92869   TAGCTAGGCAACTGA GCAGCATGGGTTAAGTGAC ATGAAC GTCACTTGAACCATGCTAC TTTGTCACTAACTGC 100 64
AV939_RS04480 1074656 .. 1074696 + -12.8   -3.9644   TAATCTTCCCTAATA  TTATGTTCGTTCATCCAT AGTAA ATGGATGAGCGAGCATAC  TTGTTATATTGCAGC 100 28
AV939_RS04490 NONE
AV939_RS04495 1077975 .. 1078022 + -10.7  -3.05521   GCGTAGAACTAATTA GGTATCATCAGTAGCACTAAC GGGATG GTTAGCGCTACTGATGACGCA TATTACCGATGTAAT  78 64
AV939_RS04500 1078688 .. 1078702 + -12.8  -5.39755   GTTTAAGAACAAGAT               GCCCGC ATA GCGGGC               TTTTTTATGCTTGTC 100 103
AV939_RS04515 NONE
AV939_RS04520 NONE
AV939_RS04525 1087927 .. 1087944 +  -3.4  -3.70811   GTAATACGCTTGATA             GCTACT TCTATC AGTGGC              TTTACGCTTGTGTGG  51 161
AV939_RS04535 NONE
AV939_RS04540 1090913 .. 1090926 +  -3.9  -4.37886   CTGCCCTCTCGGTGA               TTCAA AAAA TTGAA                TTTTCTGGAGAGTAA  64 94
AV939_RS04545 1092705 .. 1092734 + -14.3  -3.59087   GCAATAAACTAAAAA       GCCCAGCAAGGTG AATT TACCATGCTGGGC        TTTAGCCATAATATT 100 84
AV939_RS04560 NONE
AV939_RS04565 1100560 .. 1100575 + -10.4   -4.7373   GAGAAAGTATTAAAG              GGCACC TTAG GGTGCC               TTTTTCATACAGTGA  91 60
AV939_RS04595 NONE
AV939_RS04600 1109382 .. 1109402 + -12.6  -3.91897   ATACAAAAAAGAAAA            GCCAGCTG AATAG CAGCTGGC            TTTATAGATGGGAAC 100 445
AV939_RS04620 1114608 .. 1114621 +  -6.7  -3.88583   TATTTGCCTTGTCAC               GCCTA GGGT TAGGC                TTTGTGAACAGTTTG  69 285
AV939_RS04630 1115838 .. 1115858 +    -7  -2.63102   TTTAAGTCGAGATAA            TAACCTAT CGCCA ATAGGTTA            TGCTGTGCACATAGT  59 207
AV939_RS04635 1116287 .. 1116309 +  -9.1   -2.6914   CATTAGAAATTATAG           TGGGGTCAG CAAAC CTGCCCCCA           GTTATCTGCCAACTG  67 42
AV939_RS04645 1117572 .. 1117594 + -12.1  -5.99154   AAATCCCTGGATTTG           GAGCTACTG TTTTT CAGTAGCTC           TTTTTTTATTTAATG 100 74
AV939_RS04650 NONE
AV939_RS04655 1119190 .. 1119205 +  -4.8  -4.30441   CCGATACAGTATTGA              TTACAA CACA TTGTAA               TTTTCACTGTTATCA  66 154
AV939_RS04660 NONE
AV939_RS04665 1120806 .. 1120817 +  -2.2   -3.0263   TAATCGACACGTGGC                CGTA GTTC TGCG                 TGTTGCCGGAGTCAT  42 99
AV939_RS04670 NONE
AV939_RS04675 1123259 .. 1123279 + -11.1  -4.92757   GTAGGAAATGCGAAA            GCGCGCACT TAT AATGCGCGC            TTTTCTTATTGCTAG  93 94
AV939_RS04680 1124281 .. 1124293 +  -5.5  -3.61268   ACAGTAACGTATTCA                GGTAG CGC CTGCC                TTTGGCGGTTACCTG  59 105
AV939_RS04705 NONE
AV939_RS04710 1131613 .. 1131626 +  -3.9  -4.30978   ATGCGCGCAAATTCG               GAAAT TTCT ATTTC                TTTTAATGCATTAGG  64 508
AV939_RS04740 1139175 .. 1139187 +  -9.1  -3.11072   TGAAGCGTGTTTGTG                GCGTG ATT CACGC                TATCTATTGAGTCGA  68 453
AV939_RS04750 1143272 .. 1143293 + -14.5  -5.80817   AACACTAAATTAAAA           TACCCCAGC ACGA GCTGGGGTA            TTTTTTTGTCTTAAA 100 62
AV939_RS04770 NONE
AV939_RS04775 1151494 .. 1151509 + -10.4  -5.67063   AGAGTTATCGAAAAG              CCCACC AAAT GGTGGG               TTTTTTTGTGCTCGA 100 78
AV939_RS04780 NONE
AV939_RS04785 1153731 .. 1153748 +  -3.5  -2.66733   TGATGTAATTGTATT             GC-TGATA GGA TATCAAGC             TAATGTCAATTAAAA  43 107
AV939_RS04790 1154709 .. 1154719 +  -6.8  -3.30124   GACTCTTCAGCCATG                 GCGA TAA TCGC                 TTCTGCAAGGTCGCC  61 231
AV939_RS04805 1158169 .. 1158183 +  -4.2  -3.22774   TGTTGATTTGGAGTA               CCGGTT TTG AACCCG               TTGCTACTAGGTATA  52 16
AV939_RS04810 NONE
AV939_RS04815 NONE
AV939_RS04820 NONE
AV939_RS04825 1160396 .. 1160406 +  -2.4  -2.86747   AGCCAAAGCTTAAAC                 CAGG AGC CCAG                 TAGTTATGGTAGCTG  41 12
AV939_RS04830 NONE
AV939_RS04835 NONE
AV939_RS04840 NONE
AV939_RS04845 NONE
AV939_RS04850 1165792 .. 1165819 + -14.2  -4.74504   GCTCATAAAACAAAA        GCCCCTGAACGA AAAT TCGTTGAGGGGC         TTTTTAGATTCAGCT 100 100
AV939_RS04895 1175590 .. 1175602 +  -2.7  -4.67641   GGTGTAATAAGATTA                GAAAG CGC TTTTC                TTTTACTTTTCCAAT  62 96
AV939_RS04900 NONE
AV939_RS04905 1177621 .. 1177635 +  -8.6   -5.8096   TGAATTGAAATATGT               GCTTCA CGA TGAAGC               TTTTTATTTTTTATA 100 245
AV939_RS04910 1178714 .. 1178730 + -11.5  -5.29782   TACAGCTATTTAAAA              GCGCGCT TAC GGCGCGC              TTTTTTGTGCGTGTC 100 59
AV939_RS04950 1187347 .. 1187357 +  -3.2    -4.371   AGCAGCGTCATATAT                 CCAT TAA GTGG                 TTTTGCTGTAATAAG  62 123
AV939_RS04960 1188339 .. 1188357 +  -8.9  -5.07011   TGTTTTTACCGTAAA             GTGACCA TTAAT TGGTCAC             TTTTTGCTTTCTGTG  91 66
AV939_RS04965 NONE
AV939_RS04970 1189846 .. 1189865 +  -7.2  -2.78935   CGTACTGGGCGAAAA            CAAATCGT CTTG GCGATTTG             TCTCGTCGCGAATGT  58 242
AV939_RS04985 1193895 .. 1193928 +  -9.7  -5.89827   GACGACAAGCTTTGT     ACGACATTTCCTACA AAAG TGTAGGAAATGTGGG      TTTTTTTTCGTGGTT 100 230
AV939_RS04990 1194436 .. 1194446 +  -5.4  -2.62263   GGATTGAGCAAGTTG                 CACA GGA TGTG                 TGATGTAGAAAGGAT  51 199
AV939_RS04995 1194806 .. 1194817 +  -4.4  -3.01915   TATACGGCACCGTTA                TCGT GTTT ACGA                 CTATTTTTATAGCGG  49 61
AV939_RS05010 NONE
AV939_RS05015 NONE
AV939_RS05020 1198047 .. 1198061 + -12.8  -5.14563   CTCGAAAACAAAAAA               GGGCGC TAA GCGCCC               TTTTTTAATGCAAAA 100 58
AV939_RS05040 1204025 .. 1204040 + -11.8  -4.18018   CGAAACGTATTGAGA              GGGGCG ATAG CGCCCC               TTTTACCTAACCGAA  90 90
AV939_RS05045 1205004 .. 1205021 + -11.3  -5.28778   CAGATAAACTACAAG             GCACCTC TTCG GAGGTGC              TTTTTTATAGCTAGT 100 73
AV939_RS05050 1205914 .. 1205928 +  -7.2  -2.84098   AGTTGGCACCCTAAT               TTGTCA CGC TGACAA               TAGTTAATTAAGAAA  60 4
         frr 1206565 .. 1206597 +  -6.4  -3.08283   CAAAACGACTGATAC     AGT--AGGGCCAGCAA CCG TTGCTGGCCCTAAACA     TGTTGCCATCATTAT  60 75
AV939_RS05060 NONE
AV939_RS05065 NONE
AV939_RS05070 NONE
AV939_RS05075 NONE
AV939_RS05080 NONE
AV939_RS05085 1213899 .. 1213929 + -14.9  -5.04249   TTGTCGCTAATTTCA      TCAGACCAACGCCC GAAA GGG-GTTGGTCTGA       TTTGTTTTTTGCGCC 100 59
AV939_RS05090 NONE
AV939_RS05095 NONE
AV939_RS05100 NONE
        rnhB 1217038 .. 1217052 +  -2.1  -2.50994   GTACACAGCGATTAT               TCCAT GATGG ATGGG               CTTAATAAGGTTAAG  39 70
        dnaE 1220449 .. 1220469 +  -6.9  -3.10112   AAAGCCGTTTCAATC            CTCTACC ATTAATG GGTAGAG            TTCGATAGATTGACT  62 14
AV939_RS05115 NONE
AV939_RS05120 1222852 .. 1222865 +  -5.3  -3.55824   TTGAAATAGTGGGTG               TAGAC TAAA GTCTA                TCTTTGTGAGTAATA  59 18
AV939_RS05130 1226657 .. 1226670 +  -3.9  -3.72576   GCATTCAGTGTAGGT               GAAAA ATAA TTTTC                TTTCCTACAAACCAA  55 403
AV939_RS05140 1227747 .. 1227762 +  -3.2  -3.19668   GCATTTATGCCTTAG              CTAACC CACA GGCTAG               TTACATTCAATGATA  46 232
AV939_RS05150 1233285 .. 1233311 + -13.2  -4.88407   ACGCGCTTAAGCTTA         GTAGAGGTAAGA TGT TCTTATCTCTAC         TTTTTACTTAAATGA 100 43
AV939_RS05160 1235964 .. 1235980 +  -4.3  -3.91897   CATTAGACGTTGTAA              GCGGTGA GTA TCGCAGC              TTTCTAAATAAAAAA  59 282
AV939_RS05170 1251868 .. 1251883 +  -6.8    -4.564   ATTTAATGTAAAAGA              GGCTTG GACT CAGGCC               TTTTAATTTCAGCTT  77 35
AV939_RS05180 1254046 .. 1254066 +  -3.9  -4.45386   TGACTATGGGGAGTC            CACATAAGC GGA GCGAATGTG            TTTATTGGTTTGTTA  64 233
AV939_RS05200 1259328 .. 1259344 +    -3  -5.06223   TGGTAGCAGATTTTT             GCTCTGC ATTG GCA-AGC              TTTTGTTTGGTTTCT  73 523
        cysB 1261704 .. 1261741 +    -2  -5.43414   TGACAGCATAAAAAA   GGCGATTTGCGGTGTTT TACAT ATAAACCCCAA-TCGCC   TTTTTTGTATCTACT  75 122
AV939_RS05235 1267213 .. 1267231 + -14.6  -5.40464   CATTTGTGATTAAAA             CAGGTGCC ATT GGCACCTG             TTTTTGTTTATAGTG 100 46
AV939_RS05240 1268733 .. 1268750 + -12.7  -4.36595   TTCAGATATAAAAAA             GGCCGCT TAAC AGCGGCC              TTTTACGTTTAAGTA 100 91
AV939_RS05250 NONE
AV939_RS05255 1276358 .. 1276374 +  -2.3  -3.65475   TTATTAAAAGGGAGC              CAATAAT ATG AATATTG              ATTTTATTTTACCTG  48 34
AV939_RS05260 1277829 .. 1277843 +  -2.1  -2.96695   GTGCTTTAATAAGAA               CTGTG CGAAC TACAG               TGATTTAATCACGGG  42 146
AV939_RS05265 NONE
AV939_RS05270 NONE
AV939_RS05275 1281713 .. 1281726 +  -3.1  -5.20154   CTAAATGACATTTTG               TTGTG AGAG CACAG                TTTTTTAAATTATGT  75 37
AV939_RS05280 1282308 .. 1282336 +  -6.8  -4.69664   TAATAATGTGCTCTA        TGGGATAATGGC TAACC GTTATTATCCCG        TTTTTCACTACTATC  79 60
AV939_RS05285 1284064 .. 1284081 +  -8.4  -5.61881   TTCATAAAGTATAAA             GTGGGC CATCGT GCCCAC              TTTTTATTTTTGCCC 100 66
AV939_RS05290 1284977 .. 1284987 +    -4  -3.67597   AGCGCGCATAAACGT                 TAGT TTT ACTA                 TTATTCAATAGCAGG  53 4
AV939_RS05295 NONE
AV939_RS05300 NONE
AV939_RS05305 NONE
AV939_RS05310 1288505 .. 1288525 + -14.7  -5.76633   AAGGTTGATGACAGG            GGGCTGGTC AGT GGCCAGCCC            TTTTTTTGTGTCTGA 100 40
AV939_RS05315 NONE
AV939_RS05320 NONE
        pepN NONE
AV939_RS05330 1294503 .. 1294523 +  -9.9  -3.31589   TTCTTGCGAAAGTGG            CAAAATGAT GTA ATCATTTTG            TTAATCGTTATGGTT  78 198
AV939_RS05335 NONE
AV939_RS05340 1298047 .. 1298065 + -14.6  -5.45802   CGTTTTGTGTTAAGA             CGGTTGGC AGT GCCAACCG             TTTTTGTTTTCAGAC 100 42
AV939_RS05345 NONE
AV939_RS05350 1301518 .. 1301529 +  -7.2  -5.61596   CTAATCATAAAAAAG                GGCC GTAA GGCC                 TTTTTTTATAGGCGT  93 54
AV939_RS05355 1306527 .. 1306543 + -12.3  -5.24531   TCAAAAAATGACGAA              GCCCTGT AAA ACAGGGC              TTTTTTATACCAAAT 100 52
AV939_RS05360 1307624 .. 1307645 +  -7.3  -2.90688   GTTTTATACACTCAA           GCGTGTG CCAATAAA CACACGC            TCTATCAGGTAATTG  61 63
        rlmL NONE
AV939_RS05370 NONE
AV939_RS05375 NONE
AV939_RS05380 1313781 .. 1313801 + -12.5   -5.5112   TAGTTATATTTCAAA            GGCCGCGAG TTT CTAGCGGCC            TTTTTTATTGCTAAA 100 57
AV939_RS05385 1314265 .. 1314280 + -10.4  -4.72556   TTAAGCAATGAAAAA              GCCCCA TTTA TGGGGC               TTTTATCGTTTTTGA  91 63
AV939_RS05395 1315411 .. 1315424 +  -5.3  -3.18199   GGTCGTAAATTTCGG               TTTGC TTCT GCAAA                TTAAATTGCCGATTC  52 200
AV939_RS05405 NONE
AV939_RS05410 1319795 .. 1319813 +  -4.5  -4.42238   TACCAAGTAAAATGT             GCCCTGT GTGCA ACAGGCC             TTTTACTTGGCGTAA  66 43
AV939_RS05415 1321348 .. 1321359 +    -3  -2.92386   AAATACTAATTTAAG                CATT TAGT AATG                 TAATATTTAATTTCG  43 41
AV939_RS05420 1322125 .. 1322140 +  -4.8   -3.0792   ATATACTTAATTGCG              CATAAT GTAT ATTATG               TTAAATAGAGTATTG  52 374
AV939_RS05425 1324491 .. 1324505 +    -5  -3.73224   TTTCAACAATTGAAC               CCATTT ATC GAATGG               TTTCGTACCAACTAA  60 277
AV939_RS05430 1325137 .. 1325167 + -12.1  -4.23615   AATAAGCACTATAAA      CAGCGAAAAGAGTA ACAG TACTCTT-TCGCTG       TTTGTTACATCTAGT  95 260
AV939_RS05445 1326764 .. 1326776 +  -4.8  -3.10368   TGTCTTTTTGTGAAA                GCGA TACAC TCGC                TCTGATTTATCTGTT  51 298
AV939_RS05455 1330009 .. 1330024 +    -4  -3.14132   GCAAATACGCAACAA              GAGTAG CTGG CTATTC               TTAATGCAAACAAAG  48 20
AV939_RS05460 NONE
AV939_RS05465 1331116 .. 1331148 +  -8.4  -3.24232   CTACATTCTCGTTTC      GAAGTTCAGGTAGC TTGGT GCTGCCTGCCCTTC      TATATTTAACCGCAA  70 47
AV939_RS05475 NONE
AV939_RS05480 NONE
AV939_RS05485 NONE
AV939_RS05490 1335027 .. 1335044 +  -9.1  -5.60993   CAATAATGCTAAAAA             GCCTCGT TATC ACGGGGC              TTTTTTTATGAGAAA 100 55
AV939_RS05495 NONE
AV939_RS05500 NONE
AV939_RS05505 NONE
AV939_RS05510 NONE
AV939_RS05515 NONE
AV939_RS05520 1340726 .. 1340737 +  -2.2  -2.95192   GCCTGTTGGCGCGGT                TTGC TAGC GCAG                 CTTTATAGCCTTAAC  42 61
AV939_RS05525 NONE
AV939_RS05530 1342848 .. 1342869 +  -7.2  -4.78981   CGGTAACACGAAGTG           GGGCTCTC GGTAAG GTGAGCCC            TTTATTTTCGTTAAT  83 49
AV939_RS05575 1350414 .. 1350424 +    -4  -3.20858   TTTTGGAATCTGTTC                 TATC TTC GATA                 TTGATAGATATGATC  48 115
AV939_RS05580 NONE
AV939_RS05585 NONE
AV939_RS05590 1352684 .. 1352700 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  74 450
AV939_RS05645 1364571 .. 1364591 +  -3.3  -4.00348   TTGAGGATTAGATAA            TATGCTCAT GTG ATCAGCATG            TTTAATTAATTCAAC  55 87
AV939_RS05665 1368164 .. 1368180 +  -3.7  -3.45593   ATTACCCGATTAGAA              TGCGTAT CTT ATACTCA              TGTTTACGATTTCTT  51 51
AV939_RS05675 1370279 .. 1370291 +  -4.9  -4.89852   TCTCCAAGTGCTGCG                TATCA TAA TGATA                TTTTTATGACTGTAA  74 205
AV939_RS05685 1371196 .. 1371213 +  -9.1  -5.38054   TAGCGTAAAAGAAGA             CACCCCG TTAC TGGGGTG              TTTTTGTTTCTACAG 100 50
AV939_RS05690 NONE
AV939_RS05695 NONE
AV939_RS05700 1372460 .. 1372473 +  -2.4  -2.96991   AGGCTGTTACCATAC               GCTA TTTACT TAGC                TAGTTATCTTCTAAC  42 89
AV939_RS05705 1372956 .. 1372967 +  -5.8   -2.7185   TTTCAGTTAGAGCAC                GTGC TTAG GCAC                 TAATTAAGACCTAAT  54 47
AV939_RS05710 1373922 .. 1373952 + -15.7  -3.02511   TTCCCCACATACAAA       TAAGCTCGTAGAT TCAAC ATCTACGAGCTTA       TCTTCAGCAACTAAA 100 134
AV939_RS05745 1382594 .. 1382638 +  -7.3  -5.76633   ACTAGCAAATAAAAA CGCCCAGTTAGTGGTTAGCAT ATTGA ATGC-GTTCACT-ACTGGGCG TTTTTTTGTGTGTGC 100 73
AV939_RS05800 1396710 .. 1396736 +    -6  -3.22106   AATTTCAACACCACA         TATCGTGTTTAG GTG TTAAGTACGATA         TTAAGTTAAATTATT  58 69
AV939_RS05805 1399523 .. 1399553 + -11.9  -4.09864   ACGATGATTGTGCAG      GCG-GTGCGTGCAA AATT TAGCACGCACTCGC       TTTTGCGAAATCGGT  95 6
AV939_RS05810 1400779 .. 1400791 +  -3.3  -2.90813   AAGCTAATTTCGAGC                GCTAC CGC GAAGC                TAATTTCGAGCGCTA  45 45
AV939_RS05815 NONE
AV939_RS05840 1407254 .. 1407271 +  -8.4  -5.78622   AATTAAGCTATATAA             GCCCCT TTCATT AGGGGC              TTTTTTTTGCCATCA 100 58
AV939_RS05865 1411749 .. 1411768 +  -2.1  -4.75372   TCACAATCCATTGCG            TTCCCGT TATCTC ACGGAAA             TTTTTCATCACTAAT  64 282
AV939_RS05945 NONE
AV939_RS05950 NONE
AV939_RS05955 NONE
AV939_RS05960 1430219 .. 1430260 +    -6  -6.08563   CCGTCAGTTGATGAA TGACGTAGATAAGCTT TGTTTCGCTC ATGCTTTTCTACGTCA  TTTTTTTTATGTGTT 100 175
AV939_RS05990 NONE
AV939_RS05995 1435953 .. 1435974 + -10.1  -5.08367   TAAATAAAAAAAGAA           GGCGGTTGT TTAC ACTACCGCC            TTTTTCGTTTCTATT  93 68
AV939_RS06005 1438935 .. 1438955 +  -7.5  -3.21218   GGGCCCACAATGTAA            GTCGCCG GTAAATA CGGCGGC            TTAGTAATGGGAAGT  62 126
AV939_RS06015 NONE
AV939_RS06020 NONE
AV939_RS06025 NONE
AV939_RS06030 1443091 .. 1443118 +    -2  -4.84274   AGAGAAGCTTGAAGA        GCGTTTATTTTA GTTT TTAACTAAGCGC         TTTTTAGTATGGTTG  64 13
AV939_RS06045 NONE
        purN NONE
AV939_RS06055 1448068 .. 1448089 + -11.5  -4.76874   AAGTTACACCTTCAA           TCGGCGGGG ATCT CCCCGCCTA            TTTTCCTTTTCTATT 100 45
        fadE 1450797 .. 1450811 +  -4.2  -3.14931   CAAAGAAACGAGGAG               GCAAAG CTG CTTAGC               TTAATCCCCCCTAAA  50 12
AV939_RS06065 1451539 .. 1451560 + -10.2  -2.89178   GCAGAAACAAAAAAA           CCGGTGTT ATTTAA AACACCGG            CTTTCATGAATTTGT  75 75
AV939_RS06075 1453228 .. 1453238 +  -5.4  -3.54129   TAGCATTAAGAATAT                 TGTG AAT CACA                 TTTAAAAACACTGTG  57 103
AV939_RS06080 1454361 .. 1454374 +  -2.4  -2.60032   TTAATAGGGTTGTAA               CATG GACATA CATG                GGTTTTTAAAGACAC  40 120
AV939_RS06085 NONE
AV939_RS06090 NONE
AV939_RS06095 NONE
AV939_RS06100 1459136 .. 1459152 + -13.7  -5.25772   CTCACCTCTTCCAAA              CGGCGCT TAC AGCGCCG              TTTTTGTTATAATTT 100 112
AV939_RS06105 NONE
AV939_RS06110 1462218 .. 1462230 +  -3.4  -3.21099   GTACTGGTGGTCGTT                TGCT TGCAT AGCA                TTGCTAATGCCACAG  46 392
AV939_RS06130 1465826 .. 1465841 + -10.4  -5.79595   AGTAAAGTGACAAAA              CGAGGC TTCG GCCTCG               TTTTTTGTTTTAAGA 100 71
AV939_RS06135 1466553 .. 1466585 + -13.6  -3.47431   TTTTATGTAATAAAA      AAGGCTGTTCGAAT ATATG ATTCGAACAGCCTG      TTGGTATTTGGCTAT 100 31
AV939_RS06150 1469976 .. 1469993 + -12.7  -5.90231   GGGTTAAAATAAAAA             CGCCCCT GTAT AGGGGCG              TTTTTTTATCTTTAT 100 66
AV939_RS06175 1476747 .. 1476761 +  -3.5  -3.09579   TTTTCTACCATCGGT               GGCAT AATGC GTGCC               TGCTATTTTTTGCAT  46 186
AV939_RS06180 1478038 .. 1478059 + -15.9  -5.28481   CTCATAAATACAAAA           GGGCTGCGT GAAA ACGCAGCCC            TTTTTTGATTAGGTG 100 79
AV939_RS06205 1483246 .. 1483261 +  -2.6   -3.5292   AATAATTATTTACAA              CAAAGA TAAG TTTTTG               TTACTTAGTTTGTGT  47 36
AV939_RS06210 1485704 .. 1485732 +  -9.6  -5.62045   GATAAACATAAAAAA       GCGAAGGTGTCGT TTTA ACGCC-CCTTCGC        TTTTTTGTTCTCTAT 100 122
AV939_RS06230 1491623 .. 1491642 +  -7.8  -5.22943   ACGAGCATTAAAAAA            GGCTGCGT TTAA AGGCAGCC             TTTTTTGACTTTGAT 100 74
AV939_RS06245 1495393 .. 1495407 +  -7.1  -6.26417   TTAAAAAATTAAAAA               GCGGA CTTTC TCCGC               TTTTTTTTTGTGCTA 100 57
AV939_RS06250 1495892 .. 1495929 +  -9.9  -3.17876   GTGCTAATGCTATAA   AGTGGGTTAGCAGTGAG TTAG TTTACTGCTAACCCCCC    TATCTCTTGTCATTT  76 40
AV939_RS06255 NONE
AV939_RS06260 NONE
AV939_RS06265 1497695 .. 1497714 + -10.7  -5.09204   TATGAGTAATAAAAA            CGCCGCT TATGTT AGCGGCG             TTTTTGTTGGCGTAT  93 58
         fur 1500540 .. 1500565 + -16.3  -4.98531   TTTGCATATCAATAA         GGCCCTTCAAT GTAA ATTGAAGGGCC          TTTTTAGTTTGAAGA 100 60
AV939_RS06285 NONE
AV939_RS06290 1504428 .. 1504439 +  -5.8  -4.81212   TTGAATAAATCTTCC                GTGG TGAA CCAC                 TTTTCTTCTACTACC  76 322
AV939_RS06315 NONE
AV939_RS06320 1509002 .. 1509024 + -10.6  -5.68438   ATCTATTAGTGTAAA           GGGCTATCAG TGA TTGATGGCCC           TTTTTTATTTCCTCA 100 52
AV939_RS06325 NONE
AV939_RS06330 NONE
AV939_RS06335 1516769 .. 1516812 +  -8.1  -2.56596   AACATTACTTACGTA GCGGGTGTTTCTGCTGATA AAAACG TAACAGCGCAGCCACCCGC TAACTTAGTAAACGC  65 80
AV939_RS06350 NONE
AV939_RS06355 NONE
AV939_RS06360 1522208 .. 1522223 +  -3.2  -2.84732   CAGCCCAACCAAAAC              CTAGAC CTAA GTCTTG               TATAATGCCTTTGCC  44 376
AV939_RS06370 1524347 .. 1524357 +  -2.6  -3.53343   TTAAGCCGTCACTTC                 TAAT GAA ATTA                 TTTAAAAAACCAGTT  47 23
AV939_RS06375 1525050 .. 1525069 + -11.4  -4.36411   AGTGATAAAAAACAA            CAGCGCGG CATA TCGCGCTG             TTTTGCTAATTCCTA 100 70
AV939_RS06385 1526276 .. 1526287 +  -2.2  -3.10344   ATTTACCGTTAGCAT                TGCG CCCG CGTA                 TGTATTCAATAGCGC  43 49
AV939_RS06390 1526946 .. 1526969 +  -5.2  -3.34291   TTAATTCAAAACGTT          GTTTCCAGCT GATT AGCTGGCACC           TCATTTTATTTAATG  54 116
AV939_RS06395 NONE
AV939_RS06400 1529363 .. 1529387 +  -2.2  -3.36273   TTATTAGGCAAGAAC         TGACG-CGTTA ATGG TAACGTCCTCA          TTGCTATTACAGAGC  45 15
AV939_RS06410 1531501 .. 1531520 + -10.7  -5.12707   TTTAACCAACAAAAA            GGCCGCT AACATC AGCGGCC             TTTTTTAACGTTTAC  93 60
AV939_RS06430 NONE
AV939_RS06435 NONE
AV939_RS06440 1535767 .. 1535783 + -12.3  -4.71584   CTTTATAAAAGAAAA              CCCAGCT TTT AGCTGGG              TTTATTATTTATTTC 100 94
AV939_RS06455 1539302 .. 1539323 +  -6.7  -3.28912   ACAGGCTTAACCAAT           CT-GAACACA TTT TGTGTTCAAG           TTCGTGTGCCTCTGC  61 100
AV939_RS06485 1546823 .. 1546848 + -11.3  -3.22884   AATATTAGCAGCCGA         CTCCCTTTAACC GCA GGTTAA-GGGAG         TTGCTAGATTCATAC  82 54
AV939_RS06495 1549377 .. 1549434 +  -4.6   -3.6215   ACCCTATGTAAGAAA TGCATTATTTAAGCGGTTACTTATGTAT TGTA ATA-ATAAGTAATCGC-TAAAAGCTGCA TTTACAATGACTTAG  55 63
AV939_RS06500 1550030 .. 1550048 + -14.6  -4.79053   TACAGATACAAAAAA             GGCCAGTC ATA GACTGGCC             TTTCTTTTAATCTTT 100 62
AV939_RS06545 1559621 .. 1559650 + -10.7  -4.28018   CCAAAATAAGTCATA       CCATGGTGCCGGT TTTT GCTGGCACCATAG        TTTTCGTGCCGTATT  87 32
AV939_RS06550 1560607 .. 1560629 +   -15  -4.11216   TTGGCTATAACACGA           GAGAGCATCA CAA TGATGCTCTC           TTTTACGAATAGCCC 100 50
        leuS NONE
AV939_RS06565 1566551 .. 1566561 +  -2.4  -2.63164   CAAGCCAAGCCTCTG                 CCGC TAA GCTG                 ATTGATTAAGTATGC  40 6
AV939_RS06570 NONE
AV939_RS06575 NONE
AV939_RS06580 1568643 .. 1568686 +  -6.7  -3.34629   AAGCTGTGGTCATAA CAAAGCCAACCGCAGACTT ATAAGA AAGGCTGCGGTCAACTTTG TTGGTAGTTTGATGT  61 26
AV939_RS06585 NONE
AV939_RS06590 NONE
AV939_RS06595 NONE
AV939_RS06600 1573340 .. 1573350 +  -6.8  -4.08945   AACTGTATAGCGTGC                 CTGC TGT GCAG                 TTTTAAACGGATAAT  71 254
AV939_RS06605 1574597 .. 1574633 + -13.1  -3.51793   ATCGCTACACTAGTT    CAAGGGCGGCCTGATTG GTA TAATCGGGCCGTTTTTG    TATTTAATGATTGTA 100 49
AV939_RS06610 NONE
AV939_RS06615 NONE
AV939_RS06620 1576551 .. 1576567 +  -9.4   -5.7827   ATAAGTATAAAAAAA              GCGGCT TTCAC AGCCGC              TTTTTTATTTGTGTT 100 37
        ansA NONE
AV939_RS06635 1580547 .. 1580577 + -15.6  -3.33711   GCTCTCACGCTCAAT       CCGCGCAGATAA AATTACC TTATCTGCGCGG       TTAGCTTTCTGCCTA 100 66
AV939_RS06650 NONE
AV939_RS06655 1584269 .. 1584283 +  -8.6  -2.62396   AACCTCTCTACAGCG               TCAGCA TAT TGCTGA               TGCTGTAGAAGGCTG  67 83
AV939_RS06660 1585154 .. 1585167 +  -8.1  -3.13504   TGCACACGAAAGTAT               TGCCG CAGG CGGCA                TAGTTTTGATAGCAA  64 436
AV939_RS06670 NONE
AV939_RS06675 1586901 .. 1586935 + -10.8  -5.20781   GGCTAAGCCTTGTTT     GATTTCAAGCCCTG TAAATAC CAGGGCTTGATGTC     TTTTCTTTTATGATA 100 35
AV939_RS06680 NONE
AV939_RS06685 NONE
AV939_RS06690 1588730 .. 1588750 + -11.2  -5.46276   CGCATTCCCAAAAAA            GCCCAATG TAATC CATTGGGC            TTTTTTGTATGTGTT 100 60
AV939_RS06705 1592448 .. 1592475 + -13.4   -4.1466   TTAATATAAAAAAAA        GCGACCCTGACT ATTT GGTCAGGGGCGC         TTTTACAAATTAGGT 100 360
AV939_RS06715 1595920 .. 1595935 +  -7.6  -3.23276   GTCGAGAAAGCAAAA              CGATTG AACA CAATCG               CTTTATTATGTGAAT  67 238
        mnmA NONE
AV939_RS06725 NONE
AV939_RS06730 1599162 .. 1599176 +  -8.5  -5.71983   CCATACACTTAAAAA               CGCGG CTAGT CCGCG               TTTTTTTATGATTGG 100 55
AV939_RS06735 NONE
AV939_RS06740 NONE
AV939_RS06745 1602631 .. 1602647 +  -3.7  -3.39058   GCGCTGCTGATCGGT              CATTTCA TTT TGAGGTG              TATTGTCTGTCATAT  50 454
AV939_RS06760 1606389 .. 1606431 + -14.3  -2.54896   TTTAGCTTAGGATTA CCTGACGCTG-CGCTTGTGT TTTT ATACAGGCGGCAGCGTTGGG TAGATTCGATACAAG  95 67
AV939_RS06765 1608340 .. 1608357 +  -6.9  -3.21465   ATACGCTTAAGTAAG             GACAGGC TAAC GCCTGCC              TCTTAGCTTTGCGTT  62 27
AV939_RS06770 1608774 .. 1608784 +  -6.8  -3.29144   CGCATACACGTGGGG                 TGGC TTC GCCA                 TTATGCCCCACATGC  61 76
AV939_RS06775 1609354 .. 1609387 + -17.5  -3.53091   TGTTGGGGACACAAA     CACGTGGGCCGTGCT TCGC AGTACAGCCCACGTG      TTTGCGCCGCCAAAT 100 57
AV939_RS06780 1610335 .. 1610345 +  -3.2  -4.93296   ACTTTTTTTTCAATT                 GTTG CAT CAGC                 TTTTTCTGCTGCTAA  72 517
AV939_RS06795 1611641 .. 1611653 +  -3.4  -2.53715   TACCCTAAACTGTAA                GGTA TGCCC TACC                GTTACTGATAGTGCG  42 308
AV939_RS06815 NONE
AV939_RS06820 NONE
AV939_RS06825 NONE
AV939_RS06830 NONE
AV939_RS06835 1617617 .. 1617635 + -10.3  -3.46509   TTTTGCATAAAAAAA             CTCGGCA CTTAA TGCCGAG             TTCATATTATTCACG  81 476
AV939_RS06865 1626687 .. 1626712 +  -5.3  -5.37865   TTGCAATGCCCTACT         TTCGCCGCAGT GCAT GCTGCGGCACA          TTTTTTCATTATTCA  83 178
AV939_RS06870 NONE
AV939_RS06875 1629010 .. 1629024 +  -4.2  -4.32903   TTCATCTTGCTCAGC               GCCCAA GGC TTAGGC               TTTTGAATCTTTCAT  64 13
AV939_RS06880 1630087 .. 1630100 +  -2.3  -3.58343   TTTCGGCAGCTTGGC               CATGC TGGG GCTTG                TTTAAGAGTACTAAG  48 7
AV939_RS06885 1630475 .. 1630487 +  -5.5  -4.10657   CGCTAAGCTGTTACT                GCGTA ATT TGCGC                TTTTCCCCCCTGTCA  65 35
AV939_RS06890 NONE
AV939_RS06895 1633546 .. 1633573 + -17.2  -4.93696   AGACGCACTAAAAAA        GCCGCTTAGATT GAAA AATCTAAGCGGC         TTTTTAATGTTTAGG 100 99
AV939_RS06905 1637320 .. 1637334 +  -4.9  -3.78087   AGATGAAAGAATATT               GGCGC TTACT GCGTC               TTTAAGGTTTTGCTT  59 266
AV939_RS06955 1645073 .. 1645093 + -11.2  -5.75945   AATGATTTAATAGTA            GAACCTCG TTAAT CGAGGTTC            TTTTTTTTCAGCACT 100 56
AV939_RS06960 1648265 .. 1648289 +  -7.9  -2.79831   TTACGCTGACCAGCG          CAGTATGATGA AAC TCATCGTACAG          TGTGATCGAAATTCC  62 122
AV939_RS06965 1649020 .. 1649059 + -13.8  -4.57516   CAAAAGCTAACGGTA  AAATTAAAAACGCCAGCA ATTT TGCTGGCGTTTTTTATTA   TTTTGATTTAACTCT 100 59
AV939_RS07040 1661733 .. 1661752 +  -4.3  -4.30576   TTCCCTGTTGCTACA            GCA-AGGG TAGCC CCCTCTGC            TTTTAATGCTGACAA  66 391
AV939_RS07055 1667177 .. 1667192 +  -7.5  -5.57396   AATAAACGATAAGAA              GCCGC TTAATT GCGGC               TTTTTTATTGGTTAT 100 118
AV939_RS07060 1668479 .. 1668492 +  -6.7  -4.22041   GCATCACCATATTCG               CTAGC AATC GCTAG                TTTGTATTGGGCTTT  72 176
AV939_RS07070 1669918 .. 1669943 + -16.3  -3.52204   GGTTACCGGTATTTT         TAAGGGCTGGT GTTT ACCAGCCCTTA          TTCCTTTAGCAGTAC 100 42
AV939_RS07080 1670848 .. 1670862 +  -8.6  -3.35327   AAACGTTAGGTGTAA               CGCTTT TGA AAAGCG               TTGTGCAGATTTCGT  72 58
AV939_RS07090 NONE
AV939_RS07095 NONE
AV939_RS07100 NONE
AV939_RS07105 1676405 .. 1676430 + -11.2  -3.13164   GCGAATTTCACAAGA         GAAGGTCTGC TATGCC GCAGGCCTTC          TTGCATAATTGCAAA  80 40
AV939_RS07110 1677843 .. 1677878 + -20.8  -3.83323   GTTATTTAGCTTTTT    GAGTAAGTAAACAGTG CCAA CACTGTTTACTTACTC     TTTAAGTTATCTAAC 100 58
AV939_RS07120 1680134 .. 1680160 +  -3.7  -4.62441   ATCCCAGAAAGAAAA         ATGACGTGAAA AAGAA TTTCACGCCAC         TTTATTTCTGTACAA  66 136
AV939_RS07135 1685175 .. 1685204 + -18.1  -3.36289   TTATTGTTTTAACAA       TAAAAAAGCCGGC TTAC GCCGGCTTTTTTA        TTAATTGAAATGGTA 100 41
AV939_RS07145 1688912 .. 1688930 + -13.2  -5.17353   TTGAACATGATAAAA             GGGTTAGC ATT GCTAACCC             TTTTTTAATGCCTGT 100 55
AV939_RS07195 1696734 .. 1696755 + -13.1   -4.4009   ATGATTTTTCAAAAA           GAAAAGGCG GCAC CGCCTTTTC            TTTTGTAACGTCAAA 100 95
AV939_RS07205 1699554 .. 1699607 +  -5.3   -2.7782   ATTTAGCATAAAAAA GTGGCGCTAAGGTTTTATTAAGTGT AATT AAACTTAACTCACCGTTAGCGCCAC ATTCTTCGAAAATTC  52 124
AV939_RS07240 1711909 .. 1711929 + -18.3  -3.63694   CAGCGTTTAAAAAAT            GGGCGCGCT ACA AGCGCGCCC            TTATTAGAGATAAAT 100 132
AV939_RS07245 NONE
AV939_RS07250 1715489 .. 1715510 + -10.2   -5.0925   GTTGTAAAAAAAAAA           GGGTAAGC GGATTG GCTTACCC            TTTTTACTTTTGAAA  93 132
AV939_RS07265 NONE
AV939_RS07270 1723475 .. 1723487 +  -6.3  -4.78077   CGCTCAAGCCAATCG                GTGAA GTT TTCAC                TTTCTTTTAGTTCAG  80 212
AV939_RS07285 NONE
AV939_RS07290 1728225 .. 1728236 +  -4.4   -3.4158   TCACATTTAACGACA                GACT GCGC AGTC                 TTAGTCATTTTTAAG  53 49
AV939_RS07295 NONE
AV939_RS07300 NONE
AV939_RS07305 NONE
AV939_RS07310 1733965 .. 1733981 +  -6.7  -3.17688   GCCTAAAATACAGGT              TCAATAA TGG TTATTGA              TTGCTAGCATGGTTC  60 246
AV939_RS07315 NONE
        glgC 1743150 .. 1743196 +  -8.9  -3.28791   TAAAGCGAGTTATTC CATTTTGAAATGGTGGTTGAA ATAAG TTCAGCCACTGCTTCAGGATG TTCTAACGGGAACAT  72 38
AV939_RS07355 1746539 .. 1746564 + -11.2  -4.90266   TTAGATATCAAATAA         GGGCGTACTG CAAAAA TAGTACGCCC          TTTTTCATTAATAAA  93 193
AV939_RS07365 1749391 .. 1749414 +  -8.8  -3.70902   GCCCGCCAGCATAAT          GGCTCGGGTG GCAC CATCCCAGCC           TTTAGCTGTAGCCAC  72 347
AV939_RS07380 NONE
AV939_RS07385 NONE
AV939_RS07390 NONE
AV939_RS07405 NONE
AV939_RS07410 NONE
AV939_RS07415 1760942 .. 1760956 +  -6.4  -3.30124   GCTTTTGTAGACCAA               GCTTGT GAA ACGAGC               TTGTGAAAAGTAAAA  61 71
AV939_RS07420 1761710 .. 1761726 +    -3   -3.6106   CCGTAAGCTCACCGC              TGCTAT ACACA ATAGCG              TTTACCGGTGTTGCC  50 227
AV939_RS07435 NONE
AV939_RS07440 1767268 .. 1767300 +  -6.4  -4.07687   GTTGTACCTGATAGG     GC-TGACGCCATT TGAATAAT GATGGCGTCACGC      TTTTCAAGCAAGGCT  68 200
AV939_RS07465 1774025 .. 1774039 +  -7.2  -2.75647   TATTGTAAACACTAT               GAGAAT TGT ATTCTC               CTTATATCGTTAAAG  60 61
AV939_RS07470 1775091 .. 1775106 +  -6.2  -3.77087   TCATCTAGTGACATT              TCTTCA TGAT TGAAGA               TTTCCGTATTAGGTC  64 198
AV939_RS07475 1778295 .. 1778320 +   -12   -3.9735   CTTATTAATAAAAAA         CCCGAAAACT CATTAA AGTTTTCGGG          TTAGTTTTTTAGTAT  95 414
AV939_RS07485 1780787 .. 1780810 +  -6.2  -3.82097   TTACCTCTTCCTGAT          TTTGGAAATA TATT TATTTCTAAA           TTTCCTCAATTTAAA  64 41
AV939_RS07530 NONE
AV939_RS07535 1791681 .. 1791712 + -11.7  -3.53224   TGCCAAGCCTACAGC      GTGG-CGCTTGGGT AACTA ACCTAAGCGACCAC      TTTAGGCAGCAAATA  85 7
AV939_RS07540 NONE
AV939_RS07545 1793855 .. 1793889 +  -3.7  -4.15061   CGCGCAAATGAACCT    CATGTAATTAGGTGCT ACAA AGCCCCTAATTA-AGG     TTTATGTATGCATTC  59 30
AV939_RS07550 1794573 .. 1794586 +  -6.7  -3.00585   GCTTCTCTGCTATGG               GGGTT TGCC AACCC                TAATTTCATATGATG  58 253
AV939_RS07580 1802192 .. 1802214 + -16.4   -5.7827   ATACACCTAATCTAA           GCCTCAACAC CAC GTGTTGAGGC           TTTTTTGTTTCTGTT 100 100
AV939_RS07585 1803414 .. 1803432 + -14.6  -4.56597   CTAGAAACGAAAAAA             GGCGAGCA TCC TGCTCGCC             TTTTTCCGAAAGAAC 100 176
AV939_RS07610 1807018 .. 1807028 +  -5.4  -2.96405   GAGTAAAAACATTTT                 GTGA ATT TCAC                 CTGTTTTTACCTGAA  53 35
AV939_RS07615 NONE
AV939_RS07620 1809639 .. 1809650 +  -2.2  -5.11063   GGCTTACCTGCCAAT                GCTA AGGC TGGC                 TTTTTGTTGCCTGAT  71 474
AV939_RS07635 NONE
AV939_RS07640 1813611 .. 1813645 +  -7.2  -3.74251   ATAACACGCCAGTAA     CAAACGTTTCACTTGA CAA TAAAGAGAAACGATTG     TTTCATGGGGGTATA  70 97
AV939_RS07645 NONE
AV939_RS07650 1816764 .. 1816780 +  -5.9  -4.24342   AGCAACCCACCATAA              TTTACGT TGG GCGTAAA              TTTATTAGTAAGCAC  70 125
AV939_RS07655 NONE
AV939_RS07660 NONE
AV939_RS07665 NONE
AV939_RS07670 1820580 .. 1820598 + -12.4  -4.67038   TTGCTGTTAATTTGA             GCGCGTCA TAT TGGCGCGC             TTTTCGTTTTAAAGC 100 55
AV939_RS07675 NONE
AV939_RS07680 1823682 .. 1823705 +  -8.2  -3.33261   CGTTAAATATCACAA          TGCTGGTG CAGAGAAC CACCAGCA           TTGTGCCACTTCACA  70 65
AV939_RS07685 1826372 .. 1826397 + -13.5  -5.64274   ACATAACGTTGTAAA         GGTAAATCTAC CCCC GTAGATTTACC          TTTTTTTATACCTAA 100 67
AV939_RS07690 1827535 .. 1827558 + -16.8  -2.83921   AATATTCGCCAACTT          GTGACAGCGG GCTT CCGCTGTCAC           TGATGTATTTCTAGT 100 51
AV939_RS07710 1833892 .. 1833918 +  -2.5  -4.51763   CACGGTTAAAGGAAT        TTGATTGGCCTTA ATA TAAG-CCA-TCAA        TTTATTGTCTTCTTG  63 357
AV939_RS07720 1836259 .. 1836279 + -14.1  -5.85244   TAGCATATAAAAAAA            CGGTGAAGA TAA TCTTCACCG            TTTTTTGTTTTACTT 100 59
AV939_RS07740 NONE
AV939_RS07745 NONE
AV939_RS07750 NONE
AV939_RS07755 NONE
AV939_RS07760 NONE
AV939_RS07765 NONE
AV939_RS07770 1846702 .. 1846726 +  -8.6  -5.38958   AACCCACATTTTGCG          CGCCAGTATG TTTTT TATGCTGGCG          TTTTTGTTTATACAT 100 133
AV939_RS07780 1849719 .. 1849742 + -14.6  -3.66908   AAATATTATAAAAAA          GCTCGCCGCA TTAC TGCGGTGAGC           TTACTTTTAACAAGA 100 275
AV939_RS07795 1856066 .. 1856078 +  -4.1  -4.16943   AGTTGCTCAAAATCT                TTCCG ATC TGGAA                TTTTACCGTATGGCA  62 416
AV939_RS07810 1858549 .. 1858565 +  -4.3  -4.66987   ACGGAAAAATATAGG              CGCCGAG CTG CTGGGTG              TTTTCTTAAAATGTA  68 27
AV939_RS07815 1859983 .. 1860017 +   -13  -2.51223   CACATAATGGCGTTA     GTGGTGTCAGCC CCTTAGCTTCA GGCTGACACCAC     CTGTGTATTGTTAAC  89 64
AV939_RS07830 1861220 .. 1861231 +  -4.4  -2.77523   GCAGGCTATACGGTT                CTTG AGGG CAAG                 TAGTGTTGATAGAAA  48 11
AV939_RS07835 NONE
AV939_RS07840 NONE
AV939_RS07845 NONE
AV939_RS07850 1864002 .. 1864014 +  -4.8  -2.88544   TATTGTATACATGAG                GCTC ATACA GAGC                TGTATGCACGTCAAA  50 51
AV939_RS07855 1864364 .. 1864377 +  -6.7  -2.91276   ACCTTAAATTCGTTT               TAGCC TATC GGCTA                CTTTATAGCGGCGAC  58 139
AV939_RS07895 NONE
AV939_RS07900 1875229 .. 1875240 +  -2.2  -3.55444   GTCGCAGATAATAGC                GTCT CGAA AGGC                 TTTAGCAAATGAACA  48 2
AV939_RS07905 1877566 .. 1877605 + -12.2  -6.38492   CGAATTGGATAAAGA  CGTCCACAACCTTCTTTG GAAA CAGGGAATGGTGTGGACG   TTTTTTTTTGTTCGT 100 315
AV939_RS07910 1878549 .. 1878575 + -10.2  -5.55769   AGTATAATTTATTAA         GCCCGATACG CTTCCTC TGTATCGGGC         TTTTTTCTTATGCAG 100 34
AV939_RS07915 NONE
AV939_RS07920 1880941 .. 1880964 +   -11  -4.98672   CTTAGTAACAAAAAA          GCCCGTCAGA TAAA TCTAACGGGC           TTTTATATTTTTAAA  93 84
AV939_RS07950 1887293 .. 1887304 +  -5.8  -3.53811   CTGCTGATGTTGCTC                TGCC TCCT GGCA                 TTTGCAGCGCATGGG  57 318
AV939_RS07985 NONE
AV939_RS07990 NONE
AV939_RS07995 1895070 .. 1895080 +  -2.4  -3.30771   TTTTATCAACGCACT                 GAGG AAC CCAC                 TTGTGCCAGATATGA  45 47
AV939_RS08000 1896112 .. 1896123 +  -7.2  -6.11644   CACTTCTCGAAAAAG                GGCC TATG GGCC                 TTTTTTTTTGGCTCG 100 107
AV939_RS08005 NONE
AV939_RS08010 NONE
AV939_RS08015 1900410 .. 1900437 +   -15  -3.81414   TCTCGGTGTTAGAAT        TCGCCGCCCTCAA AAT TTGAGG-CGGCGA        TTGTTGCTTACAAAT 100 113
AV939_RS08020 NONE
AV939_RS08025 1901780 .. 1901790 +  -3.2  -4.19258   TTCCAGACAAGGATC                 CCTA TCA TGGG                 TTTTAAATGCGGTAT  57 58
        ychF 1902923 .. 1902938 + -10.4  -5.83822   TTAACGTACAAAGAA              CCACCC TTAT GGGTGG               TTTTTTTTGCCTGTA 100 71
AV939_RS08035 NONE
AV939_RS08040 1904286 .. 1904297 +  -2.2  -3.39327   TTTCTTTTTATCTAA                CTTC TCTA GAGG                 TTCTGACTGTGCGGG  46 43
AV939_RS08045 NONE
AV939_RS08050 1904512 .. 1904528 +  -3.7  -3.14132   GCTGCGTGGTTATCA              CTTGG GGTATAG CCAAG              TTGGTAAGGCAGCGG  48 65
AV939_RS08055 1904594 .. 1904623 + -12.3    -4.431   TACCCCAGCCATACA       TAAGAAACCGGTC CTTC GACCGGTTTTTTG        TTTTCTGCATCAATA 100 30
AV939_RS08060 1906326 .. 1906368 +    -7  -5.28176   AAAAACAAAGCTAAA GCAGTGGCAACTTTTTAAGA AGT TTATAAATCGTCGCCACTGC TTTTTTATCGCTACG  91 52
AV939_RS08075 1909612 .. 1909623 +  -5.8  -3.54935   TGCTGTGGCAGAGCG                CCCA TGGA TGGG                 TTTACCGCGCGTTTC  62 316
AV939_RS08085 NONE
AV939_RS08090 NONE
AV939_RS08095 NONE
AV939_RS08100 1915571 .. 1915582 +  -5.8  -3.51858   CTCTCTGGAGTAACT                CCGT TGAA ACGG                 TTCATTCCTTATTTA  60 28
AV939_RS08105 1917160 .. 1917176 + -10.8  -4.89852   TTGAAACATAAAAAA              CGGCGC TTCAT GCGCCG              TTTTTGTACGTGTAA  93 106
AV939_RS08120 1921694 .. 1921711 + -12.7  -5.37593   TTCCCTGGTTTTGGA             CGGCGCT GAAA AGCGCCG              TTTTTTCGTTTACAC 100 61
AV939_RS08165 1934333 .. 1934353 +  -6.9  -4.40184   GCACTTGATATATAA            GGCTTAG CGTTCAA CTAAGCC            TTTGTGTTTCATTAA  78 73
AV939_RS08200 1947873 .. 1947889 +  -5.1  -3.06831   AATCGTCAGTGTCAG              TCTCATC ATT GGTGAGG              TTCGCTGCCGATTCA  51 260
AV939_RS08215 NONE
AV939_RS08220 1953850 .. 1953870 +  -5.5  -3.70902   TTTAAATAAGTGCAA            TGCTTAG CGGCAAA CTAAGCA            TTTAACTGTAGGAAC  62 57
AV939_RS08225 NONE
AV939_RS08230 NONE
        ppnK NONE
AV939_RS08240 1958479 .. 1958492 +  -4.5  -3.17075   ATACTTGTCGATGTA               GCATG CCTT CGTGC                TTACATTAACGCACC  50 58
AV939_RS08245 1958993 .. 1959008 +  -2.6   -3.2327   TATAGCGAAGGAGCT              TTTGTT TATG AACAGA               TTGCTCCTAGCTTGA  46 96
AV939_RS08250 1960121 .. 1960137 +  -5.1  -4.13654   ACCTAGTTCATTTAG              CCAATGT GTC ACTTTGG              TTTCTGCTTTACCGC  63 401
AV939_RS08265 NONE
AV939_RS08270 1963332 .. 1963359 + -14.2  -3.46874   TCTCTTTACCGGTAA        CCCTCCCACCAA GCTA TTGGTGAGAGGG         TTATAAGTGTTTATT 100 69
AV939_RS08280 1965237 .. 1965249 + -10.5  -5.31877   ATGTTGCAAAAAAAA                CGGGC AAA GCCCG                TTTTTTCTAATCAAT 100 88
AV939_RS08310 NONE
AV939_RS08315 NONE
AV939_RS08320 NONE
AV939_RS08325 NONE
AV939_RS08330 NONE
AV939_RS08335 NONE
AV939_RS08340 1976686 .. 1976719 + -14.7  -5.36441   TTTGCCAATAAAAAA     GCCTGAGAGAAATGC TAAT GCATTCCTTTCAGGC      TTTTTTGTGTGCGAC 100 147
AV939_RS08350 NONE
AV939_RS08355 NONE
AV939_RS08360 1980590 .. 1980603 +  -2.4  -3.72893   TTACCACCGTTTTAA               TAGC CAAATA GCTA                TTTACTGAACGAATG  51 474
        folX 1981630 .. 1981640 +  -3.2    -3.737   AAACCGGTTGAGCGT                 GGTT CAG GACC                 TTTAATAAGCACTTA  53 30
AV939_RS08375 1982739 .. 1982772 + -11.9  -2.56203   AAGTGAAATTAGAAA     TTGGACACACACTCGA ATT TAG-GTGTGTGTCCAA     CATTTTGTAGGTTGG  85 177
AV939_RS08390 NONE
AV939_RS08395 NONE
AV939_RS08400 1988313 .. 1988327 +  -6.4   -3.3164   TGCTTTATACGATTA               GGGTAG TAC TTACCC               TTATCACCGTAAATT  59 222
AV939_RS08440 1993449 .. 1993462 +  -6.7  -3.56643   CCCAGTAGCGTCCAC               CACTC TTGT GAGTG                TTTAGACAATGTCAC  65 24
AV939_RS08445 NONE
AV939_RS08450 1993896 .. 1993906 +  -2.6  -5.24129   CGTCCACCACTTCCT                 TTTT TTT AAAA                 TTTTTTATAAACACG  73 201
AV939_RS08455 1996033 .. 1996051 + -10.4  -3.82484   GGACATGCCTATTTT             TTCCATCA CTT TGATGGAA             TTTAAATTCTCCTGT  80 94
AV939_RS08470 NONE
AV939_RS08475 1999890 .. 1999906 +  -2.2  -3.09516   GTAGAACCCCTGCTG              CATGAC GACTA GCCATG              TTCGCTCGTCCCCGC  43 14
AV939_RS08480 2000252 .. 2000276 + -15.9   -4.8048   CGAAACATTAAAAAA          GGGTAAATCGA TAG TCGATTTACCC          TTTTTAGTATGAAGC 100 50
AV939_RS08505 2004874 .. 2004886 +  -4.1  -4.59773   TTCCAGCAATAACGG                TGCTG GCA TAGCA                TTTTTAAGCGTAGCC  69 74
AV939_RS08530 NONE
AV939_RS08535 2010779 .. 2010802 +  -7.4   -3.2375   GAAGCACAAGCCTCA          GCACGCTAGC TATC GCTAATGTGC           TTGGCTTGTAGCCTG  64 7
AV939_RS08540 2011656 .. 2011669 +  -3.8  -3.92377   GTAACTGGTAATAGC               CACC CAATGT GGTG                CTTTTTTCTTATCAA  57 418
AV939_RS08555 2015970 .. 2015982 +  -3.3  -4.62783   TAGTCTTTTTGTAAA                CGCCA TTC TCGCG                TTTTTGAAATGACTA  64 514
AV939_RS08565 2017587 .. 2017605 + -14.6   -5.5074   TCTTGTGTATGTAAA             GCCAGCAC CTT GTGCTGGC             TTTTTTGTTACCTTC 100 52
AV939_RS08575 NONE
AV939_RS08580 NONE
AV939_RS08585 NONE
AV939_RS08590 2023633 .. 2023650 +  -5.5  -2.67925   GCAATCTATAATATA             CATCGAC GCTT GGCGATG              CTTCTCATATACACT  51 30
AV939_RS08595 NONE
AV939_RS08600 2028149 .. 2028174 + -17.7  -2.74012   TGTAGTACGTGGACT         GCGCGGTTGAT ACCT ATCAACCGCGC          TCGTTAAAGTCGTCA 100 56
AV939_RS08610 2029998 .. 2030014 +  -3.6  -4.09243   AATTTGAACAATTGA              GGCCAG AAACA CTGCCC              TTTTACAAGGCTATC  57 186
AV939_RS08620 NONE
AV939_RS08625 2034824 .. 2034841 + -11.3  -5.54885   GAAAGAATCAAAAAA             GGTGCGT TTAT ACGCACC              TTTTTTATTGATGTT 100 60
AV939_RS08645 2038852 .. 2038871 +  -7.9  -5.40072   CCAGAAAATAAAAAA            CCACAGT ATCTAC ACTGTGG             TTTTTTTAAACACGA 100 48
AV939_RS08665 2043024 .. 2043045 + -14.5  -5.24129   TAGATAACTATCAGA           GCCCAGCTT TTCT AAGCTGGGC            TTTTTTATGCAGGGC 100 80
AV939_RS08675 NONE
AV939_RS08680 2046541 .. 2046554 +  -8.1  -4.56597   GGGTCAATTTTTAAC               GTGGC AGCA GCCAC                TTTTTCAAACAAGAA  82 268
AV939_RS08695 2051895 .. 2051922 +  -4.2  -2.79785   AAGTGAGGCCTTCCA        CGATTATCGTAA ATAT TAAAGATAATCG         CTTCTTCGGGTGTCA  45 199
AV939_RS08705 NONE
AV939_RS08710 NONE
AV939_RS08715 2055943 .. 2055957 +  -4.3  -2.71712   TATTTATTGGGTAAC               GCATT TAAGT AATGC               ATTTGGGGAAAGCCA  47 56
AV939_RS08720 NONE
AV939_RS08725 2057084 .. 2057104 +  -5.4  -2.56571   CAGCATAAATAACAC            ATGCGACA AAAAG TGTCGCAC            TAGATTACATCTGTG  51 57
AV939_RS08730 2057398 .. 2057416 +    -6  -3.32844   ATGTATTTTCAGTAA             GGTTAGTC AGT GAATAACC             TTGTAAAATCGCCAA  58 9
AV939_RS08735 2058633 .. 2058647 +  -2.8   -3.2964   CACTACTTGATTACG               GCCA TTCTCTT TGGC               TTGTAGCAGCGCTTT  46 484
AV939_RS08750 2062386 .. 2062398 +  -7.7  -4.15222   AAGAACTGATATAAA                GCCAA TTT TTGGC                TTTCTTCAGCAACCT  74 330
AV939_RS08760 2063334 .. 2063360 +  -7.3  -5.63517   TACAAACACAAAAAA        GCCCCG-CTCTT GGCA AAGAAACGGGGC         TTTTTTATTTGGCGG  93 129
AV939_RS08850 2076938 .. 2076949 +  -4.4  -4.15453   AAAGAACAGCCTAGC                CAAG ATAG CTTG                 TTTTAACGTACATTC  61 8
AV939_RS08855 2077676 .. 2077696 + -12.6  -4.21194   ATCTAAATAAAAAAA            GCTGCCAC ATTCG GTGGCAGC            TTTTACCTAATAAGC 100 82
AV939_RS08900 2087060 .. 2087077 +  -8.4  -3.61468   AGCGCTAAAATTGCT             GGGGGT TAATTT ACCCCC              TTACTTTCCTTGAAA  73 17
AV939_RS08905 2088196 .. 2088211 + -10.4  -6.11644   CTACATGCATAAAAA              CCTCCC TCAA GGGAGG               TTTTTTTTTAGCTAA 100 309
        pheA 2089427 .. 2089437 +  -2.4  -3.09492   GCATTAGCGGAGTAA                 CGCG GCA CTCG                 TATTCAACTTAACAC  43 26
AV939_RS08935 2096005 .. 2096017 +  -3.4  -3.88001   GAATAACGGTTAGGC                GACA ATAGC TGTC                TTACTTTTTCTGACG  55 35
AV939_RS08975 2103281 .. 2103314 +  -5.4  -5.36689   ATTACATATAGGTAC     GTC-GGGGTTCCA AATTATAAA TGGAACCTCAGAC     TTTTGTTTTTACTTT  83 110
AV939_RS08980 NONE
AV939_RS08985 NONE
AV939_RS08990 2109758 .. 2109776 + -13.2  -5.37345   TAATATTCCTTTAAA             GCCTCGTT TTT AACGAGGC             TTTTTTATACTTCAG 100 86
AV939_RS08995 2111510 .. 2111567 +  -9.4  -3.15249   TTGCCATGGCAACCT CTAGGGTTTTTTC-CGCGTTAAAAGAT AGGTC ATCTTTTAACGCGCGCATGAACTCAAG TTCATCGCCAGTATC  72 294
AV939_RS09030 2121136 .. 2121146 +  -3.2  -3.08371   TACGTGCACACCTTG                 CGTA TGC TGCG                 TATATTGCACATGTA  46 73
AV939_RS09035 2122864 .. 2122885 +  -5.9  -2.92461   TATTTGAACCTTCAG           CCTTGGTAA TGTG TTAGCAAGG            TGCCTTTTTGTGTTC  56 380
AV939_RS09050 NONE
AV939_RS09055 2131367 .. 2131382 +  -4.7  -5.64274   AAGAATTCCAAAAAA              GAGAG CATAGA CTCTC               TTTTTTTATACCTGA  85 405
AV939_RS09075 2136645 .. 2136655 +  -5.4  -3.08798   CTGAACCAAATTGTT                 GCTA CCG TAGC                 TGTTCCATAAACGAT  54 5
AV939_RS09080 NONE
AV939_RS09085 NONE
AV939_RS09090 NONE
AV939_RS09095 NONE
AV939_RS09100 2142991 .. 2143007 +  -2.2  -4.44448   CTCTACCTAAATACT              GCGC AAAGGAAAG GCGC              TTTATTTGGACTGCT  59 31
AV939_RS09105 2145091 .. 2145118 +  -9.8  -5.39721   GTTATGAAACTTAAA        GCAGCCTTAAGG ATAA CCTTCCGGCTGC         TTTTTTGTGTCATAA 100 124
AV939_RS09110 NONE
AV939_RS09115 2146495 .. 2146511 +  -9.4  -5.32882   ATTTACAATTTATAA              TCGGCC CTCGC GGCCGA              TTTTTTATACTAATG 100 101
AV939_RS09120 2148711 .. 2148730 +  -3.6  -3.91072   ATTTTGACCTTGATA            GGTTTCTA CATT TAGAAAAC             TTTATCGAGCTTTGC  57 52
AV939_RS09125 2150364 .. 2150380 + -13.7  -5.33866   AGATAGTTATTTAAA              GCCCCGT TTT ACGGGGC              TTTTTTGTAAGTTTA 100 46
AV939_RS09130 NONE
AV939_RS09135 NONE
AV939_RS09140 NONE
AV939_RS09145 2154366 .. 2154391 +  -3.3  -3.99324   GCTGTAAAAGCAGGA         CTGGAAAATAT ATGG ATATTAACCAG          TTTATCGTGCTGGCG  55 34
AV939_RS09150 2156149 .. 2156173 +   -13   -5.4251   TAGTCGTCATTAAAG          GGCCAGTATT CATTC AATACTGGCC          TTTTTTATATGTGCG 100 67
AV939_RS09155 2157067 .. 2157095 + -13.3  -2.52676   ACCACTTTCAATTCA        CTTCTTACACCTA AGT TTGGTGTAAGAAG        TGAGTTCAAACCGTC  91 48
AV939_RS09165 2159782 .. 2159799 + -11.3   -5.5112   ATTTAAAAATAATAA             GCCCTGT GGAT ACAGGGC              TTTTTTATTGCTAAA 100 64
        asnB 2162717 .. 2162732 + -11.8  -5.97575   CTTTTAAATAAAAAA              CGCGGC TCTT GCCGCG               TTTTTTTTATGAGTT 100 56
AV939_RS09190 2165129 .. 2165146 + -12.7  -4.30014   ACGAATAATCGGTTT             GGCGCCT ACTC AGGCGCC              TTTTAGCTTAGTCAC 100 33
AV939_RS09220 NONE
AV939_RS09225 2171982 .. 2171993 +    -3  -5.19251   GTAGGAATTGCGATT                TTCA TGAC TGAA                 TTTTTATTACTATTA  73 236
AV939_RS09230 NONE
AV939_RS09235 NONE
AV939_RS09240 NONE
AV939_RS09245 NONE
AV939_RS09250 NONE
AV939_RS09255 NONE
AV939_RS09260 2179021 .. 2179072 + -11.2  -3.80094   TGACGTGATTATACT TACAAACTTTCCATACTGG-AAAGC TAT GCTTTGCCAATATTGAAAGTGTGTA TTATATTACTTTCCA  84 127
AV939_RS09265 NONE
AV939_RS09270 2179869 .. 2179886 +  -2.7  -3.05596   TGCCCTGAAGGCCAT             CGTTAAA GGCC TATAACG              TTGCATGGCGCAGTA  44 10
AV939_RS09275 2180654 .. 2180664 +  -5.4  -2.78672   ATACGCTCTCGAAGC                 CAAG AGT CTTG                 TAGTGTCTATTTCGG  52 55
AV939_RS09280 NONE
AV939_RS09285 2182229 .. 2182256 +  -7.9  -4.34557   TTTAAAAAGTAAAAA        GCCCTA-ATACT AAAAC AGTATGTAGGGC        TTTGATTTTTAGGTT  79 107
AV939_RS09295 2186115 .. 2186166 +  -2.6  -3.47941   AGCCTTAGGGTGGCA TAAGCGGGCTAGGACTGAGTTAGTAC AACT GAGC-AACTC--TCCTA-CCCGCTTA TTATCCTCCTTCATA  47 33
AV939_RS09320 NONE
AV939_RS09325 2192476 .. 2192491 +  -7.5   -4.7339   TCACTTCACGAAAAA              GCGGC CATTAA GCCGC               TTTTTCAAATTTGTT  84 59
AV939_RS09335 2194387 .. 2194404 + -12.7  -4.43681   AGTAGAAATAAAAAA             CAGCGCC GAAT GGCGCTG              TTTTAGTATTAGGTA 100 97
AV939_RS09345 2195571 .. 2195586 +  -4.7  -4.64992   GCCCTTTCTTTTTTC              CTAGG TATTTT CCTAG               TTTCTATTTTTTAGG  70 40
AV939_RS09375 2204975 .. 2204988 +  -9.5  -5.65177   GATAAATTTTAAAAA               CCCGC TGAT GCGGG                TTTTTTTATGCCTAT 100 50
AV939_RS09380 2207107 .. 2207120 +  -3.1   -3.4914   TTACGAGTTCGTAAA               GCCTCA TAA TG-GGC               TATTTACTCGTGGTT  49 17
AV939_RS09385 NONE
AV939_RS09390 2210371 .. 2210381 +  -6.8  -3.35992   TGCATGTTAAATCTT                 GAGG CAA CCTC                 TTGCTTAACATCGGT  61 433
AV939_RS09415 2215204 .. 2215233 + -15.1  -5.82172   TTGGCTTAGCGTCGT       AAGGGGAACAGAC GCCC GTCTGTTCCCCTC        TTTTTTTCTATTACT 100 450
AV939_RS09470 NONE
AV939_RS09475 NONE
AV939_RS09480 2232338 .. 2232356 +    -3  -3.36749   CTTTCTCTTCAACTT             GCTTAGAG AAA CGCTTAGC             TTGATCTTCAGAGTC  46 304
AV939_RS09515 2239199 .. 2239210 +    -3  -4.39407   TTAATTCAGCGGTTT                GTTT ACCT AAAC                 TTTTAAGTTGTTTGA  60 127
AV939_RS09525 2243265 .. 2243284 +  -7.8  -3.05844   ACGAGGCATAAAAAA            GGCCGACA CGAA TGTCAGCC             TCTTAAAATAGCAAC  65 30
AV939_RS09540 2248613 .. 2248631 +  -3.8   -2.8166   TTTATTTATTAGGTT             TGTCCAGG CAC CTTGGAGA             TCAATTTCTTTAGTG  45 61
AV939_RS09595 2258662 .. 2258691 + -13.7   -3.9534   TTTATTTCTAACAAA       AAAAAAGGCCTCC AAAT GGAGGCCTTTTTA        TTTATCGATATAACT 100 48
AV939_RS09630 2264967 .. 2264987 +  -6.9  -2.63596   CTGTTTAATCAAACA            TCCCAAG CTAATGA CTTGGGA            TGATATCAAATGCAA  59 120
AV939_RS09675 2279123 .. 2279145 +  -4.1  -4.59773   TCTTCTGCAATGATG           TTTGCCACA CGATT TGTGGCTGA           TTTTTCAGCATCAGC  69 316
AV939_RS09690 2280975 .. 2280985 +  -2.4  -3.38291   TCATATCCACATCAA                 AGCG ATG CGCG                 TTATACACTTGTGGA  45 194
AV939_RS09730 NONE
AV939_RS09735 NONE
AV939_RS09740 NONE
AV939_RS09745 NONE
AV939_RS09750 NONE
AV939_RS09755 2293901 .. 2293923 + -10.6  -4.78661   TGCAAAAACAAAAAA           TGCGGCCT AGTGAAG AGGCCGCA           TTTTAGTTTTTAAAT  91 134
AV939_RS09810 NONE
AV939_RS09815 2305808 .. 2305834 +   -13  -2.99704   TAATGTTAGTGGATA         CCCATGCGGACG CTT TGTCCGTGTGGG         CTTCTTTGATGACAG  91 38
AV939_RS09840 2312552 .. 2312570 +  -9.6  -3.41671   ATCGACTTTCAACTG             CCGTGGAT GTC ATTCACGG             TTAATTACGTATTTA  77 3
AV939_RS09845 2313923 .. 2313942 +    -5  -2.83522   GAAAACACCGCCTGA            AGGTAAGT ATTC ACTTACCA             ATTTCATCAACAGCT  49 372
AV939_RS10025 NONE
AV939_RS10030 NONE
AV939_RS10035 NONE
AV939_RS10040 NONE
AV939_RS10045 NONE
AV939_RS10050 NONE
AV939_RS10055 NONE
AV939_RS10060 NONE
AV939_RS10065 2359606 .. 2359620 +  -2.2  -3.24032   ACGTCATAAGAACGT               TTAATT ATC GATTAA               TGTTAGTTACGAACT  45 73
AV939_RS10070 2361361 .. 2361377 +    -3  -4.27316   ATGATGGGAAATAGA             GG-GCAT CTGC ATGCTCC              TTTTGACTTAAAAAC  58 192
AV939_RS10080 2363664 .. 2363691 +  -2.7  -2.80074   AATTGAATCAACTTC        GTCCATCAC AAATGAATAG GTGGTGGGC         TGGTATTGTGCAAAC  41 124
AV939_RS10165 2382656 .. 2382670 +  -4.2  -4.56978   GGAAAGTCGCTAACG               CTGCAT TGA GTGCGG               TTTCTTGTTTGGCAA  66 55
AV939_RS10235 NONE
AV939_RS10240 2396737 .. 2396748 +    -3  -2.87375   CTTGAAGGTGAGATC                TTTG GCCG CAAA                 TAATTAGGTTTTTAT  42 11
AV939_RS10245 2397234 .. 2397250 +  -9.4  -5.19212   TAAGAATACAAAAAA              GCGCGT TTAAT ACGCGC              TTTTTTGATGGTGCT 100 69
AV939_RS10255 2399311 .. 2399328 +  -5.5   -3.6392   TATATAAATGCAGGA             GCACCGT CTAT AAGGTGC              TTATACTTTCGTGTA  59 119
AV939_RS10260 NONE
AV939_RS10265 2402051 .. 2402062 +  -2.2  -4.05529   TAACTTCTTCAGTAG                CGTG CCTA CATG                 TTCTTTAATCGTTCT  55 84
AV939_RS10290 2409356 .. 2409392 + -18.9  -4.96848   TGATACATCTGAAGT    GACCCCCAATAGTTGGA CTA TCCAATTACTGGGGGTC    TTTTTATGTCCAAAC 100 356
AV939_RS10305 2411361 .. 2411373 +  -5.5  -3.17792   CTGGGACAAAAACAC                GTAGG CTC CCTGC                TCTTCGCTTGGTATT  54 69
AV939_RS10310 2412059 .. 2412085 +  -9.4  -4.15565   ATGCCCTACGTGCCT         GCGCCCCACATT TGA AATGTTAGGCGC         TTTTAGGATAATCAA  82 113
AV939_RS10315 2412639 .. 2412652 +  -3.1  -3.43919   TTCGTTCGCTAGGAC               GCATA CACG TGTGC                TATTTCACGTTTAAC  49 58
AV939_RS10320 2413206 .. 2413229 +  -5.4  -3.93556   TTAAGACTACTATCT          TTGACAATCA GGTT TTATTGTCAA           TTTCATTAAATCAGT  63 198
AV939_RS10325 2413826 .. 2413838 +  -4.9  -3.28745   ATTACTTATGGGTTA                TTTAC CAA GTAAA                TTCACTTGTTGCGCG  54 332
AV939_RS10330 NONE
AV939_RS10335 NONE
AV939_RS10340 2415956 .. 2415970 +  -4.9  -2.78679   AGTAAATTATTTCTA               GCCGT CTATT GCGGC               GTTTACATCAAGGAA  50 84
AV939_RS10345 NONE
AV939_RS10350 2417280 .. 2417290 +  -2.4  -4.64861   TGAACGCTAAGTTAA                 GGAG AGC CACC                 TTTATTTTCGGAAAA  64 382
AV939_RS10360 2417759 .. 2417773 +  -5.7  -4.27483   GGCATTATGCTTTAG               CAAGC TATTT GCTTG               TTTAATTTTATACCT  68 26
AV939_RS10365 2419612 .. 2419628 +  -2.9  -4.39652   TGATGGCTTATCAAG              TCTGCCT ACT GGGAAGA              TTCTTTGTTTGTGCT  60 492
AV939_RS10390 NONE
AV939_RS10395 2424158 .. 2424176 +  -4.6  -4.65078   GCTTTAAAGGCAGCA             CCTTAC AGGCAAC GTAAGG             TTTTATTGGCGGTGT  68 78
AV939_RS10400 2425392 .. 2425409 + -11.3  -4.57569   TAGTAGAAATAAAAA             TGCCCGA TTTC TCGGGCA              TTTTTGAACAAATAC  90 131
AV939_RS10425 2430695 .. 2430716 +  -5.8  -5.30348   AGTAAATACAAAAAA           GGGCTACC GCATTG GGTAGCGC            TTTTTATTGTTAGAT  84 109
AV939_RS10445 NONE
AV939_RS10450 2435750 .. 2435766 + -10.8  -5.38951   AACTAAAACATGAAA              GGCGCC ACTTA GGCGCC              TTTTTTGTATCCATT 100 35
AV939_RS10475 2442101 .. 2442121 +  -2.5  -4.35524   TAGTCATAATGATTG            TCGAGCA TAGTAGC TGCACGA            TTTTCCATTTGCCAA  60 320
AV939_RS10485 NONE
AV939_RS10490 2444590 .. 2444606 +  -9.5  -4.13767   GAGAATATTAGGAAA              GTAGCAA TAT TTGCTAC              TTTTCCAATACAAGA  82 141
AV939_RS10540 2456255 .. 2456271 + -13.7  -4.91109   ACCCCCAAAGAAAAA              GCCGCGT AAA ACGCGGC              TTTTTATGATGAACC 100 63
AV939_RS10550 2459444 .. 2459482 + -11.2  -5.06816   TATAAATAGTAAAAA   GGCGCTTATTATTAGT CAATAAC ACTAGCAATAAGCGCC   TTTTTGTTACGAAGT  93 104
        gltA 2494776 .. 2494793 + -11.3  -5.54264   TATTTGTTCATAAAA             TAGCGCC TTAC GGCGCTA              TTTTTTTAGCTCTTT 100 56
AV939_RS10655 2495406 .. 2495432 + -12.4  -4.46072   TAATACACAAAAAAA         GCGCAGTCAT TACTAAC ATGACTGCGC         TTTATATTTGTTCCA 100 139
AV939_RS10675 NONE
AV939_RS10680 2500184 .. 2500216 +  -4.1   -3.0806   CTGTATTGCACTTCT      TCGTGTGGGGC TTTTATTTCTT GCCTCACACGC      TATTCGCGATTTGCA  48 46
        rimO 2504179 .. 2504203 + -10.7  -5.80248   ACAGTTTAGAAAAAA          CCGGTAAGTCC TAA GGCTTTACCGG          TTTTTTTATGTGTTC 100 87
AV939_RS10730 2512284 .. 2512301 + -11.3  -4.74504   CGCAGAAACGAAAAA             GGCGCTT TATT AAGCGCC              TTTTTACGTTCCAAT  91 143
AV939_RS10750 2521154 .. 2521167 +  -6.7   -3.1552   AACGCCTCGCAGCAT               TGCGT GACA ACGCA                TATTCGTCAATAAAG  59 506
AV939_RS10765 2523952 .. 2523964 +  -4.1  -4.69464   TTAGTCATAACACCG                CGTAA GGC TTGCG                TTTTTCACCTGTTTT  68 86
AV939_RS10785 2527467 .. 2527517 + -12.6  -4.08945   AGCAGTTACGTGAGT AGTTACATAAGCGCCGACATCAGC GCT GCCGACATCAGCGCTTATGTAACC TTTTGCACAAATACT 100 40
AV939_RS10790 2529090 .. 2529110 +  -3.9  -5.34365   GGTTTCATCGGTTCT            TGCGTCAGT CTT GCTGGCGAA            TTTTTGTTCTTGTGG  83 238
AV939_RS10825 NONE
AV939_RS10830 2538395 .. 2538414 + -13.6  -5.54192   TAAAACGAAACAAAA            CAGCCAGC TTAT GCTGGCTG             TTTTTTTGCATTCAT 100 88
AV939_RS10845 2540004 .. 2540032 + -15.5  -3.10775   AGAAAGAAAGAATGA        TGAAACACAGCGT TTA ACGCTGTGTTTTA        CTTTTAGCTGCACGT 100 9
        ssrA 2541861 .. 2541884 + -15.4  -2.93858   CCACCAATTCCAGAT          GCGGTCTAGA ACCT TCTAGACCGC           TCTATCCCTCTAATA 100 35
AV939_RS10860 NONE
AV939_RS10865 2544138 .. 2544165 + -11.5  -2.78384   ATACGGTCTTGTTTT        TAACGAAGGAA TTTTCC TTCCTTCGTTA         TATGGTCAAAAGCAA  81 74
AV939_RS10875 NONE
AV939_RS10880 NONE
AV939_RS10885 NONE
AV939_RS10890 NONE
AV939_RS10895 2548174 .. 2548203 + -19.5  -2.87683   CAGCTCCACCAATTC       GCAAAAAGCCCCT TTTT AGGGGCTTTTTGC        TATCTAGCCCACTAT 100 87
AV939_RS10905 2552440 .. 2552457 +  -9.8  -5.64274   AGATAAAGACAAAAA             CCGGCG TTTCTT CGCCGG              TTTTTTTATAGGTAA 100 54
AV939_RS10910 2553991 .. 2554029 + -12.6  -2.89185   AGTTAAAAGACAAAG   GGAGCAGAGTACATTTGT TTT ATTAATGTACTCTGCTAC   TACTTCTACTATCTT  91 35
AV939_RS10915 2555679 .. 2555706 + -13.6  -4.18494   GCCAATGAGTTAGAA        TAAAGGGGGTCAG AGT CTG-CCCCCTTTA        TTTTAACTAAAACTG 100 64
AV939_RS10945 2567418 .. 2567432 +  -6.4  -2.79321   TTTTCCTCGCCGAAG               TGAGCA TGC TGCTCG               TGCTGTTCATATAGA  53 167
AV939_RS10985 2576558 .. 2576571 +  -3.9   -4.1299   AACAGGATTGTTAAA               TGAAA ACAT TTTCA                TTGGTTTTTTTTCAA  59 194
AV939_RS10990 NONE
AV939_RS10995 NONE
AV939_RS11000 2580638 .. 2580654 +    -3  -4.31397   TCATCAAGCTCTTTA             CTCCATG GCGA CA-GGAG              TTGTTTTATAAAAAT  60 335
AV939_RS11020 2584462 .. 2584477 +  -3.3  -3.25668   TTTAACGATTAAACG              GCATT TTTAGT AATGC               TATTATGCCTGCATT  48 58
AV939_RS11065 2595909 .. 2595933 +  -8.6  -3.96841   AGGTTTAGTTCATTT          TGGCAGTAGT ATAAA GCTGCTGCCA          TTCTGTTTCTTCCAC  79 101
AV939_RS11075 2598925 .. 2598954 + -11.6  -3.05384   TTGTAAGCACTTTTT       GTCGGCACAGCAA TACCT TTGCTGTGCC-AC       TTAAATACCACAAAG  82 82
AV939_RS11115 2609308 .. 2609331 +  -4.7  -2.80991   GATGCCGAAATGCCT          TTTATGACG AGCCAA TGTCATAAA           TAACTTTATTTGAAT  50 112
AV939_RS11120 2612126 .. 2612150 + -17.3  -5.06505   GTTTATAAAAAAAAA          GGGGATGGTTT TAT AAACCATCCCC          TTTTTATATGTACTT 100 78
AV939_RS11135 2616682 .. 2616725 +  -8.4  -2.90496   CGCTAACAATGATAT TTCGGTTA-CTGC-GCCTAC ATCTAA GTAGGCAGCAGTTAACCCAA TGCTTTAACAAGAGA  67 90
AV939_RS11140 2617610 .. 2617625 +  -6.1  -5.78622   GAATGTATTTTGAAA              GGAGC CTATCA GCTCC               TTTTTTTTGCGCTGA 100 57
AV939_RS11145 2618726 .. 2618737 +  -2.2  -4.59251   CGTTTCCAGTATTAT                TTCG CGGG CGAG                 TTTAATTTTTTTTGA  61 171
AV939_RS11150 2619582 .. 2619597 +  -4.7  -3.60792   CAATCAATCATGATA              TGCTG CGCTTT CAGCA               TTCTCTATACGTGCT  57 116
AV939_RS11225 2638640 .. 2638654 +  -2.8  -3.61398   GTGATGAGTAAAGCA               TCAAAG TAA CATTGA               TTATTAAACCAGGAG  49 30
AV939_RS11230 2638970 .. 2638988 +  -4.4  -3.60971   TGGAATTTCAATATA             GGCATCTG GAT CTGACGCC             TTTAACGCTTCCAGT  55 136
AV939_RS11240 2639996 .. 2640013 +  -4.9  -3.96618   AAAGAAAAACCGATT             C-GCACTA ACT TAGTGCAG             TTGTTTGGCGTTGAA  61 68
AV939_RS11245 2641522 .. 2641534 +  -3.3  -3.64703   ACATAAGAAAAGTCC                CCACC AGT GCTGG                TTTGCCTGACGAGGC  51 106
AV939_RS11255 2643051 .. 2643075 + -14.3  -6.10489   CTCGTTATTCCCTAA          GGCACACCTCT TCT AGTGGTGTGCC          TTTTTTTTTGCGCTT 100 47
AV939_RS11260 2643726 .. 2643747 + -15.9  -5.07523   TAATCTGCACTTAAA           GAGGCGACC ACAA GGTCGCCTC            TTTTCTTTGTATCTA 100 136
AV939_RS11275 NONE
AV939_RS11280 2649384 .. 2649420 + -10.3  -2.50988   AGTTTTTTTCTTAGC    GCGTAGATGGGTAATCG TAT TGGTTATTTATCTACGC    CTATTAATAATGTAA  76 73
AV939_RS11285 NONE
AV939_RS11290 2650893 .. 2650905 +  -3.3  -3.25896   GCCTACGTGTCATTG                CCCGT TAT GTGGG                TGTTATAACTACTGA  48 113
AV939_RS11295 2651251 .. 2651262 +  -7.2  -2.57344   GACGCATACACGCGG                GGCG GCTT CGCC                 ATTATGCCCCACATG  59 81
AV939_RS11310 2652307 .. 2652318 +  -7.2  -2.57344   GACGCATACACGCGG                GGCG GCTT CGCC                 ATTATGCCCCACATG  59 86
AV939_RS11315 NONE
AV939_RS11320 NONE
AV939_RS11325 2654198 .. 2654220 +  -2.8  -4.33621   ATAACAAACACATTA           TGTTCATGAT TAG ATTATGAAAA           TTTATTGCTTAACTA  58 46
AV939_RS11330 2654678 .. 2654690 +  -6.2  -3.57808   ACCCACGTGCAATTG                CCCC TTCTT GGGG                TGTTTATGCGTTCGG  62 109
AV939_RS11335 2655333 .. 2655345 +  -6.3  -3.42256   GCGTCGCTCACTACT                TAACG CGG CGTTA                TATTCTTCGGTGAGT  60 131
AV939_RS11340 NONE
AV939_RS11345 2656117 .. 2656171 +  -2.7   -3.3363   TTTTAGCACGTTCGC TGGGACGCAGACACGCAGGGCGGACT AGCC ATTATGTCCTAAGTGCCTGCG-CCCG TTAGCTTATTGTTAG  46 48
AV939_RS11350 2656494 .. 2656507 +  -4.5  -3.32844   AGTACGCATACACGC               TGGCG GCTT CGCTA                TTATGCACTACAGCC  52 56
AV939_RS11355 2656962 .. 2656976 +  -4.2  -2.99558   TGTCTGGGACAAATA               CACAAG GCT CCTGTG               CTTTGCTTGGTATTG  49 66
AV939_RS11360 NONE
AV939_RS11365 2657743 .. 2657756 +  -3.1  -3.24406   AACAATAATGGTGGT               TGGTT TTAT AGCCA                TGTATATTTGTGATA  48 166
AV939_RS11370 2658669 .. 2658689 +    -4  -3.52918   TTTATCTGCGATAAC           GGCCT-CTT TTCA AGGTAGGCC            TTAATTTAGGAATTG  51 48
AV939_RS11375 NONE
AV939_RS11380 2660074 .. 2660098 +  -4.9  -2.50816   TAGTTAACCCTTTGA          GTAACAGCCAT CAA GTGGCAGTAAC          GTTAATAGCTCGAAA  49 41
AV939_RS11385 NONE
AV939_RS11390 2661320 .. 2661337 +  -2.6  -3.53444   ATAAGTCACAATAGT             CGCGAA TACACT TACGCG              TTTAAAACGCAGTAA  47 37
AV939_RS11395 2662122 .. 2662158 +  -9.6  -3.57406   TTGAAGGTTAACCCA   TCGCGTTGCATTTCGTT GTAA AGTGAA-TGCAACGCGG    TATTTGTACTAACGA  78 49
AV939_RS11405 2663549 .. 2663562 +  -2.5  -3.96216   ATTTAACCCCCGCCC               TTTTT GAAC AAAAA                TTATTTGGCTAAAAC  53 0
AV939_RS11410 NONE
AV939_RS11415 2666714 .. 2666739 + -11.9  -5.48623   AATATAGACGAAAAA         GCGGCTAACCT CTTT AGGTTAACCGC          TTTTTATTTATGTTT 100 94
AV939_RS11425 2670900 .. 2670910 +  -2.4  -4.08945   TTTATCAATTTAAGG                 AGCG GTG CGCA                 TTTTACACGGGTAGT  54 98
AV939_RS11430 2672261 .. 2672289 +  -9.6  -5.75538   TCTACATATTTAAAA       CGCCGC-TGCGAG TCAC TTTGCACGCGGCG        TTTTTGTTTTTTGCA 100 55
AV939_RS11435 2674491 .. 2674511 +  -2.5  -2.92267   TCTATGTAGAGTAAC            GTGTAAAGC GCG GATTTACCC            TACTTGCTTTATGGA  43 27
AV939_RS11440 2675162 .. 2675180 +  -4.6  -4.86773   GCCTTAAAAACCTTT             CAGTATTA TGC TAAGACTG             TTTTTAATGCTTTTA  73 207
AV939_RS11455 2682001 .. 2682016 +  -2.5  -4.43272   GGCAGGAACCGTATA              CCTAG CTGCGT CTGGG               TTTTAGCTTTTAAGT  60 72
AV939_RS11475 2693135 .. 2693158 + -15.4  -4.04209   GCACTTACAAAAAAA          GCCGAGCATA ATAA TATGCTCGGC           TTTATCATAATTTAC 100 78
AV939_RS11495 2701600 .. 2701620 +  -5.4  -4.07885   TAATTTCAGCCCAAT           CGGC-GTCG TCTT CGATAGCCG            TTTTCAAGAAAGCTG  65 66
AV939_RS11520 2704123 .. 2704146 +  -7.4  -3.22943   TCGACCTCTTATCAA          CCAGCTTGGT GCAA ATCGGGCTGG           TTGCCTCTATTTGTG  64 49
AV939_RS11525 2705203 .. 2705229 +  -7.3   -3.4582   AGCGCAAAAGAACTT         GTGGAGCAGGC CAATA GTTTGCTTCAC         TCTTTCGTCGGCTAG  65 115
AV939_RS11535 2706073 .. 2706085 +  -5.5  -2.89564   AGCCTCTGGTCGCTT                GTGGT ATA ACCGC                TCTATACAGTGACAG  53 49
AV939_RS11540 2707183 .. 2707211 +  -7.4  -3.08812   ATTCCAAGTATAGCC        AGCGCTTGGTTT ACCCA ATACCAAGCGCA        ATTTGTTGGCCGCCA  62 151
AV939_RS11550 NONE
AV939_RS11555 NONE
AV939_RS11560 NONE
AV939_RS11565 2711986 .. 2712006 + -11.9  -2.63623   TTTACTCATGCCGTA            CGGCACTAG CCA TTAGTGCCG            CTATGTTTTAAAGCG  85 99
AV939_RS11570 2714076 .. 2714098 + -13.6  -3.65827   ACATCACATGAATCA           GTTAGCTACT ACG AGTAGCTAAC           TTTCCCTCCGCGTTA 100 47
AV939_RS11575 NONE
AV939_RS11580 NONE
AV939_RS11585 NONE
AV939_RS11590 2716070 .. 2716089 +   -15  -5.07652   TAAGTTTTGATAACA            CGACCGCC AAAT GGCGGTCG             TTTTGTTTTAAGCCC 100 63
AV939_RS11600 2717241 .. 2717253 +  -4.9  -3.04398   TTTAGATACTTTCAA                TATCT TTA AGATA                CTTTTAGGAAACAGG  51 53
AV939_RS11605 2717495 .. 2717517 + -16.4  -5.73339   TTTATCACGAGAAAA           GCTGATGGAC TTT GTCCATCAGC           TTTTTTTATACTTCT 100 48
AV939_RS11645 2727095 .. 2727113 +  -7.4  -5.95539   TAAAAAAAGAAAAAA             TCCGCC AAATAAA GGCGGA             TTTTTTTATTTCAAA 100 82
AV939_RS11675 2737278 .. 2737298 + -14.1  -5.83211   TGTAGATTGAAAAAA            GGTGCGAAT ACT ATTCGCACC            TTTTTTGTTTTCATA 100 93
AV939_RS11680 2738308 .. 2738337 + -14.5  -4.91573   TCTTAAATAAAAAAA       GCCCCGATAATCAG TCA CT-ATTATCGGGGC       TTTTTACTATCTTTT 100 83
AV939_RS11710 2745225 .. 2745237 +  -9.1  -2.56914   TTACATTTTATGAAC                GTCGC TAA GCGAC                TAGCTTCCTACCCTA  67 116
AV939_RS11715 2747023 .. 2747039 + -13.7  -5.65177   TTAACACTTTTTTAA              GGCAGCC AGT GGCTGCC              TTTTTTTATGCGTAT 100 53
AV939_RS11720 2748099 .. 2748110 +  -4.4  -4.21933   GAAAATAGTCCCATT                CTTG CCGC CAAG                 TTATTTTACCCTTAC  64 60
AV939_RS11725 2749318 .. 2749349 +  -8.7  -2.97158   TAAATTACATGATAG      AGAGTTGGCGAGC TTAAAT GCTCGCAAACTCA       GTTGTTGTTGCAGTA  69 56
AV939_RS11735 2750027 .. 2750043 + -13.7  -4.08887   GACAAACATAAAAAA              GGGGCCA ATT TGGCCCC              TTTCATTTCACTAAT 100 40
AV939_RS11745 2751973 .. 2751988 + -10.4  -3.67622   TACAGAACGTAAAAA              GCCGCT ATAA AGCGGC               TTAATTTTGAAAATG  81 42
AV939_RS11765 NONE
AV939_RS11770 NONE
AV939_RS11775 NONE
AV939_RS11780 2757676 .. 2757691 +  -6.2  -3.75105   AAACTTTTCAACATA              TTAGAC TAAG GTCTAA               TTATTGCTAGATTAC  64 132
AV939_RS11785 2758693 .. 2758704 +    -3  -2.75957   ACATGATACAACGTT                GATT AAGC AATC                 TGCTTAAAATTCGTG  42 7
AV939_RS11790 NONE
AV939_RS11795 2760112 .. 2760152 +  -5.7  -3.82098   AAACACCGCATAACG TT-CAATTTGCTGGCGATT GTTAA AACCGCCAGC-AATTGCAA TTTACATTACTTGTA  62 103
AV939_RS11805 NONE
AV939_RS11810 NONE
AV939_RS11815 NONE
AV939_RS11820 NONE
AV939_RS11825 2765886 .. 2765901 +    -9  -4.18401   GTTTAGTGAAGCCCT              GCCTAG GGCG CTAGGC               TTTTGAAATATGTCA  79 4
AV939_RS11830 2767047 .. 2767061 +  -2.9   -4.6038   TTTTAGCCGCCACCA               CTAAT AAATG ATTAG               TTTTCCTTTACTATG  62 42
AV939_RS11835 2768650 .. 2768661 +  -5.8  -2.72043   ATTGCTATTTGGAAA                CGTG GCGT CACG                 CTTTAAGAAGAGATT  54 8
AV939_RS11840 NONE
AV939_RS11845 NONE
AV939_RS11850 2772597 .. 2772612 + -10.4  -3.91858   GTTCCCCACTACGCT              GCGCTC AATT GAGCGC               TTTATAAGGTATCTC  85 85
AV939_RS11865 2778007 .. 2778021 +  -2.8  -3.01712   CCTAGGCAAGTAATT               CTAATC ATT GAGTAG               TGTTGCACCACGGAG  43 28
AV939_RS11870 NONE
AV939_RS11875 NONE
AV939_RS11880 2783324 .. 2783337 +  -2.3  -4.96848   GGTTAGCACGAAATC               CCTGA AGCT TCCGG                TTTTTCTATCAAACG  69 437
AV939_RS11905 NONE
AV939_RS11910 2793277 .. 2793315 + -12.7  -2.61086   ATCACCTCCTTTAGA   TAGTGGTGAAGCGTT AACCTCTCG AACGCTTCATCACTA   CTTCATATGTACTTT  89 65
AV939_RS11920 2794536 .. 2794563 + -13.6   -5.4505   ACTAACGCAACAAGA        GCGCTTTTAATG ATGA CATTGAAAGCGC         TTTTTTATTCCCAAA 100 48
AV939_RS11930 NONE
AV939_RS11935 NONE
AV939_RS11940 2799979 .. 2799992 +  -2.4  -3.37283   TGAGTAAAAAACCAT               GCTT AGAATA AAGC                TATTTAACGCGTTTA  45 15
AV939_RS11945 2801063 .. 2801073 +  -2.6  -3.01684   AGCGAGAAAGTGAGC                 TATT ATA AATA                 TATCTCTCAATAATT  43 209
AV939_RS11950 2803130 .. 2803144 +  -8.6  -3.08135   GATGTTTTCAGTCCT               TTGCTG AAA CAGCAA               CTTTCGTTATTTAAG  70 173
AV939_RS11980 2809424 .. 2809438 +  -8.6  -4.21194   GAGGGACATTTAACC               CACTAG CAT CTAGTG               TTTTCAATAGTCGGG  80 438
AV939_RS11995 2814064 .. 2814097 + -17.5  -4.63218   ATAACCAACGAAATA     GCCCCCGCTCGTTGGA CTT TCCAACT-GCGGGGGC     TTTTATTAAAAACAC 100 77
AV939_RS12005 NONE
AV939_RS12010 2816920 .. 2816938 +  -3.2  -2.57974   TAGGCATATAACCTG             CTTAGTTA TAT TGATTAAG             TAACTTGCTCATCGT  43 99
AV939_RS12015 NONE
AV939_RS12020 2819962 .. 2819980 +  -3.8   -4.0371   CAAATAACTGCATTG             CAACATCA CGC TGGCGTTG             TTTATGTACGCCGTC  59 503
AV939_RS12035 2823195 .. 2823210 +  -3.2  -3.48276   TTTTTTGCATAGTAT              GGCC AATAGCAG GGCC               TTCTGTGACAACACG  50 190
AV939_RS12070 2832766 .. 2832777 +  -2.2  -3.25919   CTGAAGCAAGCCCAG                GCTA CCGC TGGC                 TATTACTTAAATAGT  45 107
AV939_RS12075 2833273 .. 2833285 +  -3.3  -2.70932   CCTAAATCAAAATCA                AGGTC AGC GACCA                TGATTGCAACGGAAA  43 164
AV939_RS12080 2834888 .. 2834912 + -16.5  -5.09426   CTATAGAAGCGTAAA          GCCCCTAACAC GAA GTGTTGGGGGC          TTTTTTGAGATTCAA 100 76
AV939_RS12095 NONE
AV939_RS12100 2838096 .. 2838108 +  -3.3  -3.07787   AATTGTCTTAATTCT                CCGAC TTG GTGGG                TGTTAGCGTGATGTT  46 30
AV939_RS12105 NONE
AV939_RS12110 NONE
AV939_RS12115 NONE
AV939_RS12120 2841046 .. 2841057 +    -3  -4.72986   GACCGAAAGAGCCGA                TAAG TCTA CTTA                 TTTTTAGTCACAATG  65 341
        metG 2846726 .. 2846750 + -14.4  -5.93252   CTATAAAATTTGAAA          GCCGTGTTGA TAATC TCAACACGGC          TTTTTTGTTTTTGGG 100 72
AV939_RS12155 2848809 .. 2848827 +  -3.1  -4.18676   ATATTCGAGAGGTTC             CTTCTAC ATGCA GTTGAAG             TTGTTTGCTTTGTCA  57 82
AV939_RS12160 NONE
AV939_RS12165 2851602 .. 2851616 +  -2.2   -3.6959   ACCATTAAAACTTAA               TGATAA CTA TTATTA               TTTAAATACTCATAT  48 57
AV939_RS12170 2853842 .. 2853870 + -18.3  -5.51046   GTAATTTGATAATAA        GGGCTTAGCTGAT GAC GTCAGCTAAGCCC        TTTTTTATGTATTTA 100 48
AV939_RS12195 2861013 .. 2861054 + -10.4   -4.2231   AAACAACAAAAAAAT TGAACCGGTTCAAAAA ACATGAGACA TTTATGAACCGGTTCA  TTTTACGTGCTAATT  87 45
AV939_RS12200 NONE
AV939_RS12205 2864196 .. 2864206 +  -5.4  -4.46656   AAGTTACAAAGGAGC                 CATC TAC GATG                 TTTTCGTATTGTCCC  69 146
AV939_RS12210 2864738 .. 2864767 +  -9.2  -3.38514   TTAAGATAACAAAAA       GCCGGTCGCAGC TTTTGT GATACGACCGGC        TCTGTTTAATTTACA  77 41
AV939_RS12240 NONE
AV939_RS12245 2875654 .. 2875680 +  -8.8  -3.10498   AATGTAGTTTGTTAA         GAAGTGGGGT TCCCAAC ACCCTACTTC         ATTTATTCGAACTTA  70 61
AV939_RS12255 2877940 .. 2877962 +  -8.4  -3.68435   TACATCTTGATTAAA           GGCCGTATTA GTT TAAAGCGGCC           TCTTCTTTTCGAAAC  73 84
AV939_RS12260 2878774 .. 2878784 +  -2.6  -4.46775   AAAATTTCATAAATT                 TAAT TTT ATTA                 TTTGTCTTTTAAGTA  60 73
AV939_RS12265 NONE
AV939_RS12270 2882585 .. 2882608 + -15.4  -3.67737   TTTATCGTCAGTTCA          TAAGGGAGCG TTTA CGCTCCCTTA           TTTCGGAGTTTTATA 100 50
AV939_RS12275 2883455 .. 2883469 +  -3.6  -2.63301   GAAGGCCACCGACAT               TAAACT TTA GGTTTA               TCATATAAAACTGTC  45 23
AV939_RS12280 NONE
AV939_RS12285 2885990 .. 2886005 + -10.4  -5.78622   ATTTAATTTAATAAA              GCCCCT TCCT AGGGGC               TTTTTTTTCGCCTAA 100 61
AV939_RS12290 2887623 .. 2887636 +  -3.1  -3.86244   TGGAGTTTGAAGCGC               TGAGG CTGT CTTCA                TATTTATTGTTATAA  55 462
AV939_RS12305 2893685 .. 2893698 +  -3.7  -2.80016   TCACCAATACCTTTA               GCGCC AATG GGCGA                TGCTTCGTAATCAGG  45 316
AV939_RS12335 2902711 .. 2902733 + -11.2  -3.00525   ACAGTATATCTATCG           CCACGGGCGC AAA GCGCCTGTGC           TCTGGTTTAAAGAGC  79 408
AV939_RS12345 2903892 .. 2903910 +  -8.8  -3.60475   TTAACATGTGATAAT             GCGTGGTG TCA TGCCACGC             TTTCAACTAACCATT  74 80
AV939_RS12350 2905132 .. 2905171 +  -8.8  -5.48825   TGGCAATAAAAAATT  TAGTCCTATAATCTAGAT ATTT ATCTATGTTATGGGGCTA   TTTTTTTGAGTAATA 100 150
AV939_RS12355 2906286 .. 2906303 +  -2.7  -3.05463   ATTGTTTGCTAACAC             GGAAAAG TGCG CTTTTAC              TTAGATCAAGAAGCT  44 4
AV939_RS12360 2907066 .. 2907085 +    -5  -3.01712   TTAACATCAACAGGC            TCCAATGG CTTA CCATTGAA             TGTTGCAAAAGGGCC  51 137
AV939_RS12435 2927171 .. 2927203 +  -6.3  -2.72829   GTGTGAAGACGGACA      ACTCGATGGGGAA AATAAAG TTCCCCATCAAGC      CTTTAACCAAGTCTG  54 126
AV939_RS12445 2929946 .. 2929957 +  -4.4  -3.29144   GCAATCAGATAGTCT                CTGA ATAG TCAG                 TTATCAACCGCATAA  52 18
AV939_RS12450 2932135 .. 2932155 +  -6.9  -4.62336   AGTATCTTTGATGAA            TAGCGATGG TCT TTATCGCTA            TTTTTAAGCTGCAAT  79 23
AV939_RS12485 NONE
AV939_RS12490 NONE
AV939_RS12495 2939833 .. 2939852 +  -4.2  -5.02074   AATACAGCGCCTTAA            CCAACTCG ACGT CGGCTTGG             TTTTTTAAACGCTAG  75 85
AV939_RS12500 NONE
AV939_RS12505 2942334 .. 2942347 +  -4.5  -2.93708   CCTACCAGCCGGCCA               TAGCG CTTG CGCTG                GTATTTTTGCGCGCA  49 72
AV939_RS12520 2945448 .. 2945469 + -14.5  -3.06837   CAGCAAATAAAAAAA           GCCTATCCC CGCC GGGATAGGC            CTTTTAGAAGATTAT  95 183
AV939_RS12535 2949721 .. 2949733 +  -4.8  -3.56092   ATAAGCGGGTGATCG                GCAG GATGG CTGC                TTTGCAGCGTAATGC  56 455
AV939_RS12545 2952142 .. 2952154 +  -6.3  -3.72695   CACACCTGCGTAGGT                CATCA AAG TGATG                TTTACTCCGCCCCCT  64 214
AV939_RS12565 NONE
AV939_RS12570 2958552 .. 2958568 +  -7.3  -5.42259   GCGACTATAAAAGAA              GAGAGTG CCC TACTCTC              TTTTTTTGCGCCTAA  91 131
AV939_RS12600 NONE
AV939_RS12605 NONE
AV939_RS12610 2966764 .. 2966778 +  -4.2  -4.67982   CATCTAAATCCACAT               CGGTTT CAA ACACCG               TTTTATTGCGTACAG  69 84
AV939_RS12680 2980551 .. 2980561 +  -2.6  -3.85114   TGAGGTGAAGCGAAG                 TTTA AAT TAAA                 TTTAATATCCGCTTT  51 105
AV939_RS12685 NONE
AV939_RS12690 NONE
AV939_RS12695 2982893 .. 2982913 +  -5.3  -3.18274   ATAGCCCAGTGCATA            CGCTACACC TTT GTTGTTGCG            TTGACTTGAGGTAAA  54 239
AV939_RS12700 2983616 .. 2983649 +  -9.7  -2.89793   TGAATATGCAACTTC     CATATATATGCGCCT ATAT ATGCGCCTATATATG      TGCTTGTATGAATAC  75 54
AV939_RS12705 NONE
AV939_RS12710 2984578 .. 2984594 +  -2.9  -4.10007   GGTATTGGCAGCTGG              GCCTTCA CAC TTAGGGC              TTTTAGAAGCATTCT  55 12
AV939_RS12715 2985363 .. 2985374 +  -2.2   -4.2679   TATCCACATGCTTAA                TGCC CCGC GGTA                 TTTTAGTGCCCGTTG  57 404
        hisG NONE
        hisD NONE
AV939_RS12735 2989468 .. 2989485 +  -2.6  -3.58703   CATAGAGGAGCTAGC             GGCATG AGTCAG CAAGCC              ATTTTATTTATCGAC  49 19
AV939_RS12740 NONE
AV939_RS12745 NONE
AV939_RS12750 NONE
AV939_RS12755 NONE
AV939_RS12760 2993381 .. 2993421 + -13.8  -4.25283   GTAATATAACGAGCT TAAGAAAAGAGCAAATTAC TCTC GTAATTTGCTCTTTT-TTA  TTTTAATCACCCGCT 100 79
AV939_RS12830 3006549 .. 3006568 +  -6.4  -4.39318   TTAAATAGCGCGAAA            GAGGCAAT ATAC AATGCCTC             TTTTAAATTTACTTC  75 33
AV939_RS12835 3007726 .. 3007739 +  -3.8  -3.30128   CTAGCTTGCTACTTT               GCAC ACGTTA GTGC                TATTGATTGATTAGT  49 207
AV939_RS12840 3010381 .. 3010397 +  -2.9  -3.30124   GCCGCTTCGTATATA              CCAAAGC AAC GTTTAGG              TTCTAAACGCTAGCG  46 3
AV939_RS12870 NONE
AV939_RS12875 3018269 .. 3018291 + -10.7  -5.78622   GACTGATACAAAAAA           GCTCAAGAA TTAAT TTCTTGAGC           TTTTTTTTCGAATCA 100 88
AV939_RS12910 NONE
AV939_RS12915 3028618 .. 3028638 + -11.9  -4.24432   CTGATATAATTTTTA            TGCGCTACT AAA AGTAGCGCG            TTTAATTTTCAATTT  95 137
AV939_RS12920 3029176 .. 3029189 +  -9.5  -3.07307   AGCATAGATTGAGAG               GCGGC TAGC GCCGC                TTCCCTCCCAGTTTA  74 39
AV939_RS12930 3031471 .. 3031488 + -14.1  -5.12971   AGTCGCCTAGTTTAA             GCCCCGC CCCT GCGGGGC              TTTTTATTGCCTGTT 100 54
AV939_RS12965 3039976 .. 3039989 +  -2.4  -3.60627   CACGCAGCGCTCTAC               GTAG AAAGTG CTAC                TTTAGACTACACTCG  48 22
AV939_RS12970 3041061 .. 3041076 + -10.4  -5.61596   CACGTATCTTTAGAA              GGTGGC TTTG GCCACC               TTTTTTTATGGCAGT 100 63
AV939_RS12975 3043991 .. 3044017 + -10.3  -4.83243   TTTATATATAAAAAA        GCCACACTATCT ACCA AGAT-GTGTGGC         TTTGTTTTATCTACA  91 63
AV939_RS12995 3049475 .. 3049497 + -13.5  -5.89947   AGCTGGATCAAAAAA           GCGCAGTTC ACAAC GAACTGCGC           TTTTTTTTGAATTTA 100 51
AV939_RS13015 NONE
AV939_RS13020 NONE
AV939_RS13025 NONE
AV939_RS13030 NONE
AV939_RS13035 3056413 .. 3056434 + -14.5  -5.10154   GATTTCAAAATAAAA           GGGCGAATC ATCT GATTCGCCC            TTTTTGATTTTGCGT 100 123
AV939_RS13050 NONE
AV939_RS13055 NONE
AV939_RS13060 3061556 .. 3061571 + -11.8  -4.87807   TTTTAAAAACAAAAA              GCCCGC AGTA GCGGGC               TTTTTAGTATGTTCA 100 61
AV939_RS13115 3072385 .. 3072402 + -11.3  -5.74122   CTACATAATATAAAA             CGGGCTT ATAT AAGCCCG              TTTTTTTATGTCGTG 100 175
AV939_RS13120 3073263 .. 3073273 +  -5.4  -4.34402   ATACCGCTAACAACA                 TCGA CAA TCGA                 TTTTGATCTAGCCCC  70 351
AV939_RS13130 3077393 .. 3077411 +  -5.9  -3.57561   ACTAAGTCGTTCGCA             CCGTCGC CCATC GCAACGG             TTTGAGAGCTTGGAA  59 344
AV939_RS13140 3079191 .. 3079206 +  -6.1  -2.57931   TCGCCAAGGTATTCA              GGGCT GTTTCG AGCCC               CTTGTCGGCCCTGCA  53 202
AV939_RS13195 3090055 .. 3090113 + -19.2  -3.46336   TTACAATAGAAATAC AAAAAGCCCACTTCCTAATACAGCATAT TCA ATTCGCTATATTAGGAAGTGGGCTTTTC TATTTACCTTGCGCT 100 92
AV939_RS13215 NONE
AV939_RS13220 3093626 .. 3093655 + -13.7  -3.68222   TAAGAGTATTACTAA       CTAAAAAGGGAGC CTTG GCTCCCTTTTTTG        TTCTTAGCGTTAACG 100 56
AV939_RS13235 3096063 .. 3096074 +  -5.8  -2.79098   TGGTTTCATGCTTAT                TCGC AAGC GCGA                 TAGTTGATGAGTAGC  50 340
AV939_RS13245 3096765 .. 3096781 +  -7.3  -3.12005   GCACTTCCACTGCAC              TAGAGGG TAT TCCTCTA              TGTTAAGGTTATCTG  62 3
AV939_RS13250 NONE
AV939_RS13255 NONE
AV939_RS13260 3099039 .. 3099050 +  -3.6  -3.70007   CAGCCTGCGCAGTTC                CGCT TACT GGCG                 TTGCTTTTAGCTGGT  51 143
AV939_RS13320 3113835 .. 3113848 +  -9.5  -5.68039   ACAGTTAGTAAAAAA               GCGCC TATT GGCGC                TTTTTTTGTGCCTTT 100 46
AV939_RS13345 3118769 .. 3118792 +  -9.6  -2.55351   CCTCCATATAGTGGC          GTTCCAAGGC AATC GCTTTGGGAC           CTTGCTATGAAAAAA  71 110
AV939_RS13350 3119610 .. 3119646 +  -3.6  -2.60079   CATAAGCATACCACT    TAAACCCGCGTTTCAT AATGC ACGAAACGCGGGCCTC    TGCATTGTCAGATAA  45 36
AV939_RS13355 3121575 .. 3121590 +  -3.2  -2.78384   TGGCACACCGACTTC              CACTAC TTGC GTTGTG               TCTGATGCGAAAAAC  43 136
AV939_RS13420 NONE
AV939_RS13425 3135116 .. 3135138 +    -4  -2.61467   TCCAGGGATGCCAAA           TACGGCCGCC CCA GATGTCCGTA           ATTGGTTCAAGGTTT  45 68
AV939_RS13430 3135944 .. 3135960 +  -2.1  -2.83449   CGTCGTTGGGATTAA              CGCGCTT TAG ACGCACG              TGGTTGTAGCACTAT  41 16
AV939_RS13435 3137691 .. 3137705 +  -3.6    -3.646   GGCAAAAGACTTTGT               TGTTAG TCT TTAACA               TTGTCTATCATTGAA  53 13
AV939_RS13440 3138634 .. 3138644 +  -6.8  -2.82595   TGCATCAGCGGAAGG                 CCAG TCA CTGG                 ATTTCACTAATTAAA  57 1
AV939_RS13445 3139666 .. 3139687 +  -5.9  -3.65046   GTATTAAATCAATAA           GAGGCCTTAT TTG ATG-GGCCTC           TTATTCAAATAACAC  62 41
        xseA NONE
AV939_RS13480 3150741 .. 3150766 + -12.6  -5.07275   CACTAAAACAAAAAA         GGTCGGCGCT TGTAAT AGCGTCGACC          TTTTTATATGTGTGA 100 260
AV939_RS13585 3172084 .. 3172101 + -11.3  -5.65177   AAAGGTTAAATAAAA             GCGGTGT TCAT ACACCGC              TTTTTTTGTGCCTGT 100 82
AV939_RS13595 3174732 .. 3174746 +    -5  -3.15407   AATACCTAGCTGTTG               GACGAA ACT TTTGTC               TATCTTGATGATATC  52 314
AV939_RS13645 NONE
AV939_RS13650 3186849 .. 3186866 + -12.7  -3.29658   TAAAGTAATATTTAA             CGGGAGC TTAG GCTCCCG              CTTTGTCTTTTATAG  95 38
AV939_RS13655 NONE
AV939_RS13660 NONE
AV939_RS13665 NONE
AV939_RS13670 NONE
AV939_RS13675 3190993 .. 3191003 +  -3.2  -3.33815   CAACTAAACTTTATT                 GCTT GAT GAGC                 TTAATTGCCACCAAT  48 46
AV939_RS13680 NONE
AV939_RS13685 3192634 .. 3192647 +  -5.3  -3.06312   GTTCATCGGCACAAA               TAGAG TAGC CTCTA                TTAGCTAAAAAGTTT  51 291
AV939_RS13705 3197980 .. 3197995 + -10.4  -5.95946   CCAACTTTGTTCAAA              GGCACC TTCG GGTGCC               TTTTTTTATTATTCA 100 53
AV939_RS13710 NONE
AV939_RS13715 3201602 .. 3201646 +  -9.6   -4.6526   CCAGTAAAAAAGCAA TGTCGAGCTTAGCTAA-CTTA TCAT TAAGGTTAGTTAAGTTCGCCA TTTTTACCGATTTAT  88 140
AV939_RS13720 3202806 .. 3202816 +  -3.2   -3.0127   TCGATAGACGTAGAC                 GGTT TAT AGCC                 TGTGTCATTAACTAA  45 114
AV939_RS13735 3205609 .. 3205622 +  -3.1  -2.54639   TTCCGCTAAAAACGC               CGATA GAAT TGTCG                AGTTTATTTACAGAT  43 58
AV939_RS13740 3206683 .. 3206700 +  -8.4  -6.07627   TAATCTATTTAAAAA             CCGCTC TTTATT GAGCGG              TTTTTTTTTAAACAT 100 57
AV939_RS13745 NONE
AV939_RS13750 NONE
AV939_RS13755 NONE
AV939_RS13760 NONE
AV939_RS13765 NONE
AV939_RS13770 NONE
AV939_RS13775 NONE
AV939_RS13780 NONE
AV939_RS13785 NONE
AV939_RS13790 3219043 .. 3219062 +  -2.1  -4.04697   TTTCGCAGGTTATGT            GGGAAGT AACTAG ACTTCGC             TGTTTTGTTATATCT  54 57
AV939_RS13795 3220027 .. 3220068 +  -9.1  -3.72893   TGTTGACGCTATTGA TAAGATGTTTCAGAAGTAA CCTT TTAATTTTGAAATATCTTA  TTTACTGAGCCCCTA  76 7
AV939_RS13850 3232314 .. 3232325 +  -2.2  -4.50058   GATATAATTATTATT                CCAG AAGC TTGG                 TTTTAGTTCTAAGTA  59 8
AV939_RS13855 NONE
AV939_RS13860 NONE
AV939_RS13865 3236646 .. 3236661 +  -6.2  -2.64794   CTGCCAACATATCAA              GATAGT ACTT ACTATC               TCGTATGACATTACC  53 210
AV939_RS13880 3239971 .. 3239983 +  -6.2  -4.07568   AATGTTCGATAGCTA                GGGC CAGTT GCCC                TTTTCGCAAAGCACC  68 460
AV939_RS13890 3243630 .. 3243655 + -16.3  -2.81272   TAATGATAATAATAA         CAAAGGTGAGC AGTA GCTCACCTTTG          ATTTAACTAATCGTC 100 10
AV939_RS13930 3253346 .. 3253366 + -14.7   -5.4251   CGCTACCAATTGAAA            GCTCTGGCC TAT GGCCGGAGC            TTTTTTGTATGTGAA 100 57
AV939_RS13935 3254334 .. 3254350 +  -3.7  -3.72893   TTAAAGCAGTAAAAG              CAATATC ACT GCTATTG              TTTACTAAACCAATA  55 144
AV939_RS13940 NONE
AV939_RS13945 3257053 .. 3257063 +    -4  -3.24021   AAAACAAAATTTAAT                 GTTT CTT AAAC                 TTCACTCTTTGAAAG  49 27
AV939_RS13950 3257856 .. 3257870 +  -2.1   -3.2963   GATACCCATTGAAAG              C-GCTG ATTG CAGCAG               TTCTAGGGCAATAAT  45 258
AV939_RS13970 NONE
AV939_RS13975 3260787 .. 3260840 +  -7.5  -3.41836   CCAATCCTTATTAAC TGATAAGTCATCGCTCATACACCTA TTAA TCGCGGTATGGGCGATCACTTTTCA TGTTTGGATAAATAT  68 27
AV939_RS14015 3268989 .. 3269012 +  -4.4  -4.63486   ATTCTAATAACTAGC          ACCGAGTCGC ATTC GCGACGTGGC           TTTTATTAGCAGAAT  68 27
AV939_RS14035 3274032 .. 3274052 +  -6.2  -2.87963   TTGCGCTGGATCTAA           CCCATACTC TCCC GAGT-TGGG            TGTCCTACTTGTCAC  55 242
AV939_RS14060 3280948 .. 3280966 + -10.3   -4.4648   AACAAAAAACTAAAA             TGGCACC GAAAA GGTGCCA             TTTTCTGCTCGCGCT  89 40
AV939_RS14070 3283072 .. 3283103 + -21.8  -3.18728   ACTGGGTAAATAAAA      CAGCCCTCTAGCTT AAAT AAGCTAGAGGGCTG       TTAAGTATTACGGCT 100 212
AV939_RS14095 NONE
AV939_RS14100 NONE
AV939_RS14105 3294673 .. 3294694 +  -8.7   -4.7033   CCGTTAAAAATAGTA           AAGGGCATC ATAA GATGCCCTA            TTTTGTGTTCGGTTG  88 78
AV939_RS14110 3295927 .. 3295939 +  -3.4  -3.78775   AACCTTAATGCTCAT                CAAG CTTTT CTTG                TTTGATAGTGCCAGC  53 270
AV939_RS14135 3298994 .. 3299022 +    -9  -3.19038   TATACTAATCTTTAA        GGTCAGAGTT AATAAAACC AACTCTGACC        TTGCATCGTTTTGCC  70 43
AV939_RS14145 NONE
AV939_RS14150 NONE
AV939_RS14155 3305655 .. 3305673 + -10.3  -5.28176   CAGTAAAAATGAGAA             TAGGCGC ATAAA GCGCCTA             TTTTTTGTCCATGAA 100 83
AV939_RS14165 3308806 .. 3308844 +  -9.1  -2.55544   CCGTTAGTTACAACA  GCGCGTTTATT-TGAC GCTCTCTA GTCACGATAAACGCGC   TAAATTAAATGCTCA  67 41
AV939_RS14200 3316310 .. 3316327 +  -2.7  -3.14878   AGCAACAATTAAAAC             GGGTT AGTACTGA AACCC              TGTTCACTTAAACGG  44 29
AV939_RS14220 3321745 .. 3321757 +  -3.4  -4.99043   TATGGTTCTAGACCA                TGCT AACTC AGCA                TTTTCTTTGTCAAAC  72 151
AV939_RS14230 3323604 .. 3323619 + -10.4  -5.20154   TTAAAACAGCAAAAA              GGTGGC CATG GCCACC               TTTTTTAGATTATGT 100 94
AV939_RS14250 3327015 .. 3327025 +  -3.2  -3.96142   GGAGTAATTAGCTTG                 CTTG TTA CGAG                 ATTTTTTCTTGTATT  55 72
AV939_RS14255 NONE
AV939_RS14260 3328384 .. 3328394 +  -6.8   -2.6704   CATTACTTGGTCAAG                 TGCG GGG CGCA                 TACCTTTGCCGTTTG  56 70
AV939_RS14270 3331680 .. 3331702 +  -5.6  -2.62184   CCAATCAAGTCAGCA           TCTACGCC TTCCATC GGTGTAGA           TGCTATACCCAAGCG  50 185
AV939_RS14280 3334446 .. 3334458 +  -4.1  -2.84587   AAGCCACGGTGCCAA                CACGT GCC ATGTG                ATTACTTTTCTGGCG  45 94
AV939_RS14285 3335274 .. 3335293 + -10.8  -4.71776   AAAAAAGAAAAGAAA            GAAGGGAA CGTG TTCCCTTC             TTTTATTAAATATTG  91 126
AV939_RS14290 3336023 .. 3336051 + -12.6  -3.98113   GTAAGATACAAAAAA       GCCCTTGG-TGTT TTGC AACAACCAAGGGC        TTTCATTAATGCTTA 100 37
AV939_RS14300 3339374 .. 3339398 +  -4.4  -3.24232   CAAACCCCATTAAGT          CTATATGAAT TTTTT ATCCATATAG          TGTCTTTCACAACCA  52 82
AV939_RS14355 3353328 .. 3353339 +    -3  -3.54424   CATCGCATTTAATCA                GTAA CCAC TTAC                 TTTCCAGCAGTAGCG  47 236
AV939_RS14365 NONE
AV939_RS14370 3356598 .. 3356626 +    -9  -3.23708   ACTTTTACTCATATA        TAAAGGCCAG AGAGAAAAG CTGGCCTTTA        TCCTTTTTCGACAAC  72 446
AV939_RS14380 3357986 .. 3357997 +    -3  -3.49634   ACTTGCACTTTAGAA                TTAC ACAT GTAA                 TCTTATATTTAGACT  47 124
AV939_RS14385 NONE
AV939_RS14390 3359695 .. 3359737 + -15.3  -3.11459   CCGTAAACCAATCAA GAAAGAATACTAAAAGGAGC GCGC GCTCCTTTTAGTGTT-TTTC TTAAATAATGCTATT 100 41
AV939_RS14395 3360356 .. 3360374 +  -3.2  -3.28637   GAGACTTTTGTGAAA             GATAAGTT ATT GATTTATC             TTGCTCCTGTTCGTA  48 163
AV939_RS14400 3362200 .. 3362256 +  -8.1  -2.52676   AGGGCTCATAAATCT CGCTGAACTTAACTCCATGTCATGCC TAATAC GGCATGACATGGAGTGGATAGCA-CG TAGATTAAGGAGCTC  64 49
AV939_RS14415 3365110 .. 3365122 +  -4.7  -3.66178   AGCAAAAAGGTTAGT                GCGAG CTG CACGC                TTTCACCTTGAGCAA  57 27
AV939_RS14435 NONE
AV939_RS14440 NONE
AV939_RS14445 NONE
AV939_RS14450 NONE
AV939_RS14455 NONE
AV939_RS14460 3378153 .. 3378165 +  -4.1  -3.39784   TTCATACAGTGCAAA                TACCG ACT TGGTA                TATTCTTGCGCGTAA  50 127
AV939_RS14475 3379913 .. 3379929 +  -4.5  -3.21395   AACAATACACACTAT              TTGAACA CTT TGTTTAA              TATTATGAACACCGT  50 347
AV939_RS14485 3380895 .. 3380924 +  -7.9  -2.89683   AACATTTAAAGTATA       TGGCAGCGG AAAGTTCTACAC CCGCTGCCA        TATATACCGTGAAAT  64 84
AV939_RS14505 NONE
AV939_RS14510 3386087 .. 3386119 + -15.7    -4.564   CTAAGCGGCAACCAA      GGCCTGATTTCGATA TTG TATCGGACTCAGGCC      TTTTAATTTCAGCTT 100 111
AV939_RS14555 3397389 .. 3397401 +  -4.9  -3.98173   CGAGGAGGATCGGTA                CTATT GAA AATAG                TTTCATTACCTTTCA  61 384
AV939_RS14560 3399431 .. 3399448 + -12.7   -2.8552   CTCTGAATTCATGTT             GCCCCGA AAAC TCGGGGC              CTTTAATAAATGCCG  82 326
AV939_RS14570 NONE
AV939_RS14575 3401323 .. 3401336 +  -6.7  -2.99273   GGCTCCGTTGTGCCG               GTTGC CAGA GCAAC                ATTTATGATAATCAG  58 68
AV939_RS14630 3418168 .. 3418191 + -15.4  -5.39721   AAAACTCAAAAAAAA          TGCCGGATGT GAAA ACATCCGGCA           TTTTTTATATGCTAG 100 56
AV939_RS14635 3418616 .. 3418627 +  -7.2  -2.76696   TGATGAGTAATTTTA                GGGC TAAG GCCC                 CTTATTAGGAGCCAA  60 31
AV939_RS14640 3419200 .. 3419212 +  -2.6  -2.52543   TGTACAAAAACAATT                GCGC CAGCA GTGC                TAAATTACAACCAAT  40 381
AV939_RS14660 3424250 .. 3424287 +  -3.3  -3.30039   AACAGCCCCGTTTAT   CACCCCAGTTTAGCATT GCTA GATGCGATACTGGTGCG    TGTTAATTGTAAGTA  48 13
AV939_RS14665 3425785 .. 3425803 +  -3.8   -3.1085   CGTAGATTTAGCGTC             GCGATGTT TTG AACGTCGA             TATTCCGTCACTTCA  47 466
AV939_RS14675 NONE
AV939_RS14680 3429424 .. 3429438 +  -8.6  -5.27477   AACAGAACCCATTTA               GTTGAC ATT GTCAAC               TTTTTTCATTAAGGT 100 484
AV939_RS14690 3429988 .. 3430001 +  -2.3  -3.22102   CATGTTAGATAGCAT               GCCCT TTGA AGCGC                TGTTCTCACAAGTAT  44 75
AV939_RS14700 3431533 .. 3431545 +  -6.2  -2.93073   AACGAGGATCATCGT                GCGC TAATT GCGC                TAGTTGTTGCCACAA  55 361
AV939_RS14730 3437319 .. 3437335 +  -6.6  -2.69871   AAGCGCAGCAATAAA              GAGCTT GGGAA AAGCTC              ATATTTCATATCAAA  55 264
AV939_RS14740 3438453 .. 3438463 +    -4   -2.8978   CCTTAAAAAATTAAC                 TTAG ACC CTAA                 ATTTACTATCGAAAT  47 27
AV939_RS14745 3438959 .. 3438971 +  -4.1  -5.00616   TCATGGCGTATTGGC                TTCTG CCG CAGAG                TTTTTTGCGGCAGGG  71 41
AV939_RS14755 3442557 .. 3442569 +  -3.3  -3.60098   CAAGACGACATTTAA                CCCCT GAA AGGAG                TTTCAGATGAACCAT  51 26
AV939_RS14760 NONE
AV939_RS14765 3443726 .. 3443764 + -14.2  -3.17475   ACTTTACGCCCCCAA   CATTGTGTGTTTGGTA CGTTTGT TACCAAACACATAATG   CTTTCTTGCCTTTCT  95 40
AV939_RS14775 3446493 .. 3446509 +  -3.7  -4.04806   TCACCTCGGCTAAAC              GCCTT CACATCA AAGGC              TTGTTTAATGTGGGC  59 450
AV939_RS14795 3450447 .. 3450462 +  -4.6  -3.14564   ACCTGTTATTGAGGA              GCGCAA ATAA TGGCGC               TTAATAAGCCCCTCA  50 16
AV939_RS14800 3451276 .. 3451289 +  -5.3  -3.36515   AAAATTTATCTGACA               TTTGG TGTT CCAAA                TATTTAAAAGTAGAA  56 444
AV939_RS14810 3452469 .. 3452509 +  -6.2  -4.18421   ATAGAATGAATAAAA TGGGGGCAGAGTACTTTTA CAAT TAATTG-ACTCTGACCCCA  TTATTTATCTACTTA  68 40
AV939_RS14825 3456360 .. 3456397 +  -7.9  -3.84266   GACAGATAAAACAAT   GAGGCAGAAT-CATTTTT AAA AAAAATGTACTCGGCCTC   TTTGGTCTACGCTCT  72 43
AV939_RS14830 3457900 .. 3457915 + -10.4  -4.42748   TTATTTGCATTTTTT              GGGGCT TTAC AGCCCC               TTCTTTTTACCCTGG  89 58
AV939_RS14835 3458576 .. 3458592 +  -9.4  -5.38321   TGTTAGGTAATTAAA              GCCCGA ATTAC TCGGGC              TTTTTTGTGCTCTTT 100 116
AV939_RS14860 3463885 .. 3463911 +  -9.4  -4.41616   AGCCTAAGAAAAAAT         GGGGTCTAAGTA ATG TACTCTGACCCC         TTTATTTAGACCCCT  86 97
AV939_RS14870 3465506 .. 3465523 +  -9.1  -5.38054   ATGAATTAAACACAA             CGGCGCT GTAA AGCGTCG              TTTTTGTTTATCCAC 100 47
AV939_RS14875 3468404 .. 3468428 +  -3.5  -4.60487   TTACATCCTTTATTA          CCAGCATATTG CTT CAGTCTGCTTG          TTTTTCCCAGTAATA  64 53
AV939_RS14900 3474141 .. 3474153 +  -6.3  -3.53733   GAGCATACCGAAGCA                TTTGC TAG GCAAA                TATTTATACAGTGAA  60 104
AV939_RS14910 NONE
AV939_RS14915 NONE
        dkgB 3478092 .. 3478138 +  -6.1   -4.1552   TACCTAAATAAATGG GAGGCAGAGTAC-TTTTCTA AGGAAAAA TATAAAATGTACTCTGCCCC TTTATTCGAGAAATA  68 150
AV939_RS14925 NONE
AV939_RS14935 3481793 .. 3481825 +  -6.4  -2.89081   CGTTTTATAAGAATG      GGGTCAGAGT TTTAAAGTGATTT ACTCTGACCC      ATTATTCATTAAATA  57 31
AV939_RS14945 NONE
AV939_RS14950 3488047 .. 3488085 +  -3.1  -4.20516   CAAGAAACAAAATGT   GGAGCCATAGTACTTAT AAGAG AAAAGTACTCTGCCCCC   TTTATTCACTAAAGG  60 153
AV939_RS14960 3489277 .. 3489313 +  -2.3  -3.06133   CAGTTTTCCTATTAG    TTGCTATTGAGAAGTTA GCA TGACTATACAACAGCAA    TTCAATAAGCACTTG  43 3
AV939_RS14965 3490847 .. 3490860 +  -5.3  -4.78661   CTGTAGACGGAGTAG               CTCAA AGGG TTGAG                TTTTGCTTTTTGGGT  74 248
AV939_RS14970 NONE
AV939_RS14975 3492300 .. 3492336 +  -4.6  -3.54935   GATGTTGATTATGGG   CATACTGCT--CAAGGTG AAC CACTTTGCCAGCAGCATG   TTTAAAGCAAGTTTC  55 160
AV939_RS15015 3502236 .. 3502262 +  -8.9   -5.2853   TTAGCGTGAAAAAAA        GCCGCAATTTAT ATAA ATAAAT-GCGGC         TTTTGTTTTTAAATC 100 83
AV939_RS15025 NONE
        ssrS NONE
AV939_RS15100 NONE
AV939_RS15105 3528518 .. 3528545 +  -9.2  -2.96941   TTTATAGATGTGAAA        GGAGGCTGTTCTA CGG TAGT-CAGCCTCC        TGCTTTCACATTTTA  73 34
AV939_RS15110 NONE
AV939_RS15115 3530891 .. 3530902 +  -3.6  -3.09831   ATTCCCCTATCACGG                TGGG TTAG CCCG                 TGGTTTTCCGGTAAA  48 51
AV939_RS15120 3531737 .. 3531764 + -14.8  -3.76379   CCCATCCATGGGAGC        TCCGCCGCCGCA TCCA TGCGGCGGAGGG         TTTGCTCCAGTCTTA 100 159
AV939_RS15125 3533130 .. 3533147 + -12.7  -4.84918   AAAGACATAAAAAAA             CGCTGCC AATT GGCAGCG              TTTTCTGTTTCTACA 100 81
AV939_RS15175 3545774 .. 3545789 +  -6.8  -3.14931   CTGACTTTGCACCAG              CGCTGG AATG TCAGCG               TTGGTAACAACTAGA  59 302
AV939_RS15215 NONE
AV939_RS15220 3557184 .. 3557197 +  -8.1  -4.72846   AAGTTCAACAACATA               GGGCT GAAA AGCCC                TTTTTGAATGTGTCA  87 198
AV939_RS15225 3557845 .. 3557862 + -11.3  -5.38047   TATTTGATTTGAACA             GCCCAGT GAAT ACTGGGC              TTTTTTGTCTAGCTA 100 44
AV939_RS15230 3559149 .. 3559167 +  -8.1   -5.2166   CACTACACATGATTA             GGCTTGC CCAGC GCAGGCC             TTTTTTGCATTATTA 100 74
AV939_RS15235 NONE
        coaE 3560883 .. 3560907 +  -2.8  -3.67417   ATGAAAGTAGGCTTG          GCTTAGGGCA GTTCA TGCATTAGGC          TTTAGGGTTAAGTCT  49 133
AV939_RS15245 NONE
AV939_RS15250 NONE
AV939_RS15255 3562897 .. 3562918 +   -13  -5.79595   CACAGAGACAAAAAA           GGGCGGTC CATGAA GACCGCCC            TTTTTTATTTTGAAG 100 70
AV939_RS15360 3588553 .. 3588574 +  -8.8  -5.56112   GCAAAAATACAAAAA           GCAGTTAG CTTGAT CTAACTGC            TTTTTTGGTTTTTCT 100 122
AV939_RS15395 NONE
AV939_RS15400 3600695 .. 3600713 +  -5.2  -3.91144   TGCATGCTCAACTAA             GCTTGTCG TAG CAACAGGC             TTTATAGGGTATCGC  61 169
AV939_RS15425 3608788 .. 3608805 + -11.3  -4.96848   TAGAGCAAAAAAAAA             CGCCACA TTAA TGTGGCG              TTTTTGTATCAGAGA  93 65
AV939_RS15435 3611306 .. 3611323 +  -4.1  -3.13403   AAATGCTGAATGCCC             CCACTTA GGAT TTAGTGG              TATTCATACCAAAAC  48 109
AV939_RS15440 NONE
AV939_RS15445 NONE
AV939_RS15450 3613417 .. 3613436 +  -7.8  -3.48276   GGTTGAAAATCAATA            CGGCGACT AGCC ACTCGCCG             TTATCTGGACACCCG  68 16
AV939_RS15470 3616868 .. 3616880 +  -4.1  -5.09426   CCTACTATTTTTTAC                TGAAC ACT GTTCG                TTTTTTCAACTTACA  73 43
AV939_RS15475 NONE
AV939_RS15480 NONE
AV939_RS15485 3618805 .. 3618822 +  -5.5  -5.60993   GTAAAAACCTCAAAG             GGCGATT GAAA ATTCGCC              TTTTTTTATGCGCGC  86 78
AV939_RS15490 3619981 .. 3620009 +  -9.7  -3.08798   TAGCTTAATATTTTC        CATACCTAAAACT TTT AGTTTTAGGTGAG        TATTCGCTGCACCAT  76 115
        fadH 3622305 .. 3622334 + -13.7  -3.48295   TTTAGCTTTATAAAA       AAGAAGGGAAGCT AATT AGCTTCCCTTCTC        TATATTTCTTATATT 100 70
AV939_RS15510 3625352 .. 3625370 +  -4.4  -2.57463   CCATGACAATACTTG             GGCTGTCA CAA TGTCTGCC             ATTGTAAACAGGCTT  46 245
AV939_RS15525 NONE
AV939_RS15530 3629665 .. 3629685 + -11.1  -5.06414   CAAATAATAACTGAA            CGGCCGG CTTACCC CCGGCCG            TTTTTATTGGCAGAA  93 76
AV939_RS15560 3638534 .. 3638559 +  -8.3  -5.56264   CGTCAAGTGTAAAAG         GCCCGCGTTGAG TAA CTTA-TGCGGGC         TTTTTTGTGTTTACA 100 61
AV939_RS15575 3641301 .. 3641312 +    -3  -2.96695   TGTGTATATATCATA                CAAA AGGA TTTG                 TGATTTCATGAAAAA  43 73
AV939_RS15580 NONE
AV939_RS15585 3642617 .. 3642660 +    -4  -3.61356   TTTTCGCTTTACATA TACGAAAAATCATATACGAT ATGC AACATATATGATTTAACGTA TTTGAGATGAGTGAT  53 93
AV939_RS15590 NONE
AV939_RS15595 NONE
AV939_RS15600 NONE
AV939_RS15605 3645390 .. 3645406 + -12.3  -5.31545   GATTAAAAGCAAAAA              GGAGCTC ATT GAGCTCC              TTTTTTAATATTCTT 100 66
AV939_RS15615 3647854 .. 3647866 +  -2.7  -2.60244   ATTGTATGTATAAAC                GTTGA TAT TTAAC                TCCATTAATTAGAAG  41 55
AV939_RS15620 3648561 .. 3648582 +    -3  -2.90496   TATAGAATTGCGGAT           CCTGTTGT GTGTTA GCAATAGG            TAATTTCACCCGAAG  43 11
AV939_RS15625 3650365 .. 3650377 +  -4.8  -4.75174   CTCGTCTAGCGTTAA                CGAG CCGCC CTCG                TTTTTACCTTCGATA  75 370
AV939_RS15640 3652631 .. 3652641 +  -3.2  -2.95091   ATTTATTTAAAAGCT                 CAGC CTG GTTG                 TATCTAGCTTCGCGT  45 91
AV939_RS15645 3653124 .. 3653136 +  -2.7   -3.9901   AATAGGCGTTATCGC                GTATA AAT TATGC                TTATTCGTTTTCCTT  53 36
AV939_RS15650 NONE
AV939_RS15655 3655658 .. 3655685 + -16.4   -5.1356   TTTGCAAAAAATAAA        TGCCCGC-AGCGT TAA ACGCTAGCGGGCA        TTTTTATTCGTGGCG 100 57
AV939_RS15670 NONE
AV939_RS15675 3659605 .. 3659616 +  -4.4  -2.65789   ACAGCGTGATGTGCA                CTCA TTAT TGAG                 ATTGCTTGATATCCT  47 209
AV939_RS15680 NONE
AV939_RS15685 NONE
AV939_RS15690 NONE
AV939_RS15695 NONE
AV939_RS15700 NONE
AV939_RS15705 3665128 .. 3665143 +  -7.6  -3.85522   TATGTCTATTGATGC              CAGTGA AAAC TCACTG               TTGTTCTGCTCGGTT  72 84
AV939_RS15710 3665931 .. 3665941 +  -2.4  -3.08508   AACACATGGGCACTG                 GCGC TTC GCTC                 TGATTTTAACCCATG  43 85
AV939_RS15715 3667475 .. 3667490 +  -7.6   -3.6187   AACCCACAAACTATT              CATGAC AAAT GTCATG               TTACTTTGCTTACCT  70 175
AV939_RS15720 NONE
AV939_RS15725 NONE
AV939_RS15730 NONE
AV939_RS15735 3670562 .. 3670604 +   -18   -2.9006   GATGCTGCCAGAATC GCAAAACAAAAAGGCTGGTT ATA AACCAGCCTTTTTGTTTGCC TATATCCGCTGCATT 100 2
AV939_RS15745 NONE
        prpB 3675267 .. 3675280 +  -5.9  -3.64822   AAAGGCTAACGGCTG               GCGGC TAAA GCTGC                TTTGGCTACGGAGGT  62 32
AV939_RS15755 3676718 .. 3676733 +    -4  -3.18383   TTCGTGACGTACCTC              CTATGT CTGC ACGTAG               TTAATGACTAAGGCT  48 6
AV939_RS15760 3679584 .. 3679598 +    -5  -2.86426   ATGGATTGGTGTGTT               TTGAGC GGG GCTTAA               TCGTTATCACTCTTA  50 253
AV939_RS15765 3680948 .. 3680965 +  -9.1  -3.76778   ACTTCAGTATAATAT             TGCGCTC CTAG GGGCGCA              TTGTTCCTACATTTT  76 103
AV939_RS15770 3682370 .. 3682382 + -10.5  -2.63596   CAATTTCAGGTAAGG                GGCGC TTT GCGCC                TCGTCTAAACTGCGC  70 139
AV939_RS15795 NONE
AV939_RS15800 3691683 .. 3691733 + -12.1  -3.34028   ATTACTTTTTAATAC CTTGGATGCAGCGGCGCATCGCT TTTTATC AGCG-T-TGCCGCTACATCCAAG ATTTTCGTTTCGATT  89 83
        gltB NONE
AV939_RS15825 3703021 .. 3703036 + -10.4  -5.24129   GTAATCTATTTAAAA              GCTCGC TTAG GCGAGC               TTTTTTGTGGCCAGC 100 83
AV939_RS15830 NONE
AV939_RS15835 3704000 .. 3704026 +   -11  -4.15833   TTCTGACATTCAAAA         GCGCCATTAT CTTCTCA ATAATGGCGC         TTTTCAACTCATCAT  86 94
AV939_RS15865 NONE
AV939_RS15870 3719214 .. 3719259 +  -2.8  -4.82154   TACTATTTCCCCCTA GCCTTTGTTGCGCT-CCATTAT TGCT GTAATAGCAG-GTGACAAAGGC TTTTTCCTGTCAGTT  65 46
AV939_RS15875 NONE
AV939_RS15880 3721089 .. 3721099 +  -6.8  -3.19463   TTCACAAGCTGCGCA                 CGCA AGT TGCG                 TTAATAACTACTACA  60 55
AV939_RS15885 3721901 .. 3721912 +  -2.2  -2.81814   GGTATTAACTAGCTC                TGCC ACAA GGTA                 TAATATTGCTTCGTT  41 29
AV939_RS15890 NONE
AV939_RS15895 NONE
AV939_RS15900 3723483 .. 3723514 + -14.6  -3.46068   AAAAATCTACTGAAA      TTAAAAAGCCCCGA TAAA TCGGGGCTTTTTGG       TATTTGCGTTAACAC 100 39
AV939_RS15910 NONE
AV939_RS15915 NONE
AV939_RS15930 3733264 .. 3733282 +  -7.4  -5.95286   CATTTCCACCGCATG             GGTCGTCA TTT TGATGGCC             TTTTTTCTTTTTAGT 100 57
AV939_RS15935 3734710 .. 3734728 + -11.8  -5.82281   ATCAGTTAATAAAAA             GCAGTCAT TTC ATGACTGC             TTTTTTTATATCTTT 100 114
AV939_RS15945 3736744 .. 3736770 +  -2.4  -3.72893   AAGCAGGTTTTCTTC        CTC--CCATGAC AGAGA GTCATGGTCGAG        TTTGCTCGCCAAATA  51 349
AV939_RS15960 3738793 .. 3738807 +  -8.5  -4.86293   CGCTCTTTGGCCACG               GCCGC AGTGC GCGGC               TTTTCCTTTTTCTTG  89 319
AV939_RS15985 3744083 .. 3744117 +  -7.3  -3.69434   GCCCTTAACTAACGC    TTTGTTTTGTCGCTGC TGAA GCA-CGACAAAACGCA     TTTGAAATTGATTAG  67 378
AV939_RS15995 NONE
AV939_RS16000 3746751 .. 3746772 +  -5.8  -2.53822   CCGCTATAAATTGAA           CAGGCCGT ATTACC ACGGACTG            ATGTTATGGAATAAC  53 32
AV939_RS16005 3747506 .. 3747518 +  -3.3   -3.6502   TCTTTGTCTACTAGG                GCACT TGA AGAGC                TTTGAATCAACCATG  51 521
AV939_RS16015 3749184 .. 3749209 +  -9.8  -4.82667   TTTAGCCACTAAAAA         GCCCGTTATGC GTTAA GCA-AACGGGC         TTTTTAATATGCTAG  91 50
AV939_RS16030 3751195 .. 3751208 +  -6.7  -3.10597   TTTTTCTCGCGTGAA               GAACG CTTA CGTTC                GTTTTCAGTAAGAAG  60 1
        glnA 3754875 .. 3754890 + -11.8   -5.9873   CGTAAATATACAAAA              GCCCGC TTAT GCGGGC               TTTTTTTTATGCTAA 100 55
AV939_RS16045 NONE
        glnL NONE
        glnG 3758117 .. 3758131 +  -2.8  -4.77759   CGCAAATTAAAAGAG               CTAGGT ATT ACATAG               TTTTTACTCGGTTCT  65 11
AV939_RS16065 NONE
AV939_RS16070 3760845 .. 3760856 +  -2.2   -4.4078   TTATTTAATCAACAA                TGGC ACCT GTCA                 TTTTGATTAGAAAGG  59 103
AV939_RS16075 3761751 .. 3761767 +  -5.9  -2.77685   TAAAAAGACTTCCAT              TGAAACG CTG CGTTTTA              TCCGTTTATTACTAT  54 56
AV939_RS16080 3763322 .. 3763353 +  -5.3  -4.53705   TTAGTAGCATAACCT      GAACGATCAGAAT CCGTTA ATTTTTATCGTTC       TTTTGTCTAAAGCTT  72 37
AV939_RS16085 NONE
AV939_RS16090 3767492 .. 3767511 +  -6.4  -4.75776   TTTTAGCAAAAAAAA            GAGTTGTC TTTC GACAACCC             TTTTTCAATTCGCTT  79 80
AV939_RS16110 NONE
AV939_RS16115 3774868 .. 3774916 + -26.5  -5.26875   GGTTCTACCGTTCAA TATTGGATACAAAAAAGGGAAGC TCT GCTTCCCTTTTTTGTATCCAGTG TTTTTTGCTTACCAG 100 120
AV939_RS16125 3776345 .. 3776356 +    -3  -2.87654   GGACTTCAAAGCTTA                CAAA GGTG TTTG                 TCATTATGAATTATT  42 5
AV939_RS16130 3777096 .. 3777113 +  -8.4  -5.38249   AAAACACTTACAAAA             GCCGAC GTTCAA GTCGGC              TTTTTTATGATTGAT 100 58
AV939_RS16135 NONE
AV939_RS16140 3779323 .. 3779338 +  -3.9  -5.16151   CAGTAAATAGCCGTA              GCGCT AGGGAA GGCGC               TTTTTCTTACGTTTG  73 35
AV939_RS16145 NONE
AV939_RS16150 3781711 .. 3781734 +  -9.6  -4.44608   GCCTTTTTTATCATG          CCGCTTAGCA CTTG TGTTAGGCGG           TTCTTTTTGAATGCC  86 56
AV939_RS16155 3783282 .. 3783296 +  -2.8  -2.73681   TGTAAACCAACTTGA               GTATGA TAA TCATTC               TCATTACGATGACTG  42 49
AV939_RS16160 NONE
AV939_RS16165 NONE
AV939_RS16170 NONE
AV939_RS16175 NONE
AV939_RS16180 NONE
AV939_RS16185 3791624 .. 3791638 +  -2.8  -3.86421   CTGGTATTTAAAGCC               TTCTAG AGC CAAGAA               TGTTTATCTTTTATT  51 65
AV939_RS16190 3791847 .. 3791862 +  -7.6  -5.64274   TACCAAACATTTAAG              CCAACT TTTT AGTTGG               TTTTTTTGTGCCTGA 100 36
AV939_RS16200 3794418 .. 3794434 +  -4.3  -3.59698   GTTTTTCTCGTTGCG              GCTTCAG TCT CCGAGGC              TTATCTCTAGGCTAG  55 45
AV939_RS16205 NONE
AV939_RS16210 3800497 .. 3800527 + -11.2  -3.19851   AACAATACAGAAATA       GAAGCAAACTAAGC TTG GCTTAGTTTGCAAC       TTAATAAACTATTTT  80 14
AV939_RS16255 3817366 .. 3817396 +  -9.2  -3.64703   GCGATGCAATCAGAC       TGACGAATATTGTC TTT GATAATATTCGTAA       TTTGGGTGAGCAACG  75 344
AV939_RS16275 NONE
AV939_RS16280 3823106 .. 3823134 +  -8.9  -4.16284   TTATATTTGTTGGAA        TGAATTTTCCGGT TAC ACCGGAAGGTACA        TTTATTGCGGAGTCT  82 371
AV939_RS16330 3836190 .. 3836205 +    -9  -2.69871   AATGTTAATCACATT              TCGCGA TCGT TCGCGA               CTGTTTAATATCAGA  67 39
AV939_RS16390 NONE
AV939_RS16395 NONE
AV939_RS16400 NONE
AV939_RS16405 3855280 .. 3855290 +  -6.8  -3.00419   CTTGCACGACATAGA                 CGCA GAT TGCG                 TGATTTGGCTTTGCT  58 117
AV939_RS16410 3857189 .. 3857204 + -10.4  -4.74103   GATAAGTAATCAAAA              GGCTGC TATT GCAGCC               TTTTTCAATTACCCA  91 221
AV939_RS16415 NONE
AV939_RS16420 NONE
AV939_RS16425 NONE
AV939_RS16430 3860353 .. 3860370 +  -7.1  -2.54687   GATACAAGACCTTAC             CGTTTAA ATAC TTAAACG              CTTAGTCATGATTGA  59 19
AV939_RS16435 3862154 .. 3862172 +    -6  -3.90048   CCAATTTACGACTCT             TCCTCC CCCTTTA GGAGGA             TATTTTTCGGGAACC  66 74
AV939_RS16440 3864731 .. 3864749 +  -9.6  -5.15167   AATTAAAGGTATAGA             TTAGGCGT TAT GCGCCTAA             TTTTTCTTAGTCCTA  91 56
AV939_RS16445 3866149 .. 3866189 + -10.8   -5.1861   ATTTTCTTCTAATTG TTAGCTTAAATAGGGAGCA ATTT TGTTCCCTATTTAAG-TAG  TTTTTTAGTGATAAG 100 29
AV939_RS16450 3867153 .. 3867163 +  -2.6  -2.64155   CTCACGATGTAACTA                 TTTT GTT AAAA                 TAAATTTAACAAACA  41 88
AV939_RS16455 3868098 .. 3868124 +  -7.4  -3.63968   ACACAGCATAATTGG         CATATTGGGCAG TGT TTGCTTAATATG         TTTCGCAATTTCCAG  67 221
AV939_RS16495 3879745 .. 3879766 +  -5.2  -5.51402   TCACTTAATATTAAG           CCGTTTAA TTCACC TTAAGCGG            TTTTTTTACGTCTGT  85 59
AV939_RS16500 3881491 .. 3881506 +  -6.8  -5.17576   TTCCCTAATGAAAAA              GACCGC CTTT GTGGTC               TTTTTTGCATTCGTA  83 100
AV939_RS16505 3882131 .. 3882145 +  -2.9  -3.85698   GGCTTAGTGGAGATT               TAATG AAGGC CATTA               TTTCTAACCGAGCAC  51 171
AV939_RS16510 NONE
AV939_RS16515 NONE
AV939_RS16520 3889130 .. 3889158 + -16.1  -3.68366   TTTCATCAAAAAAAA        TGGCTGCCCGT CATTACA ACGGGCAGCCA        TTCATTTTGCAGTAA 100 43
AV939_RS16555 3903295 .. 3903307 +  -3.4  -3.72576   ACCCCTTCCTTCTAC                CGAA TTTGC TTCG                TTTACTAACAACACA  53 315
AV939_RS16560 NONE
AV939_RS16565 3905109 .. 3905134 +   -12  -3.69333   GATAAGCACTGACGA         TGGCTACAAC ACATAG GTTGTAGCCA          TTTACATGCCTTATG  90 52
AV939_RS16570 3905955 .. 3905998 +  -6.8  -4.94672   TTAATATTTATTTTA GCGGCTGTATGAGTGATTG ATCTATG CCATCACTTATTC-GCCGC TTTTTCCTCTTCTTT  81 37
AV939_RS16575 3909853 .. 3909871 +  -3.8  -4.05446   CTACATCACCGATAA             GTACGTAA GCT TTGCGCAC             TTTGTCATTGGGGGG  59 488
AV939_RS16625 NONE
AV939_RS16630 NONE
AV939_RS16635 3925414 .. 3925436 +  -8.5  -2.86432   TGCGGTTAGCCATTA          GCGGCAG-TA GTCT TACCTGCCGC           TATGATAATCTTAAG  66 132
AV939_RS16655 3930235 .. 3930245 +    -4  -5.74684   TGTTACTTAGTAGGG                 TACT CAG AGTA                 TTTTTATTTTTCTTG 100 113
AV939_RS16665 3931993 .. 3932019 +  -2.3  -4.86621   TAAAGTTTTGATAAT        CGGCCTGCCCCAT AGC ATGGGCCA--CCG        TTTTTAGTTGAGCCT  66 99
AV939_RS16680 3936206 .. 3936227 + -15.9  -5.30616   TGAGTTATACCTAAA           TGCGGCGCT GCAA AGCGCCGCA            TTTTTATTTGCATCC 100 55
AV939_RS16685 3938327 .. 3938340 +  -3.8  -5.05228   CCAGCCTTAGGATGA               GTGC CCTATT GCAC                TTTTTATACTTTGGT  73 152
AV939_RS16690 3939532 .. 3939550 +  -3.8   -3.6471   ATGCTGCCATCGCTT             TTAACGGC TAC GCTGTAAA             TTATATGCTTTAACA  53 8
AV939_RS16695 NONE
AV939_RS16700 3943041 .. 3943053 +  -4.9  -3.53811   TTCGATGAGTTTACC                TAAAG CAT CTTTA                TTTCCAGGCGATAGC  56 358
AV939_RS16710 3946696 .. 3946725 + -13.7  -4.60889   CTAAAAGCAACTAAT       AATAAACACCGGC AAAT GCCGGTGTTTATG        TTTTTACCCCTCGTT 100 37
AV939_RS16715 NONE
AV939_RS16720 3948852 .. 3948877 + -12.6  -3.68757   ACATCTTTATTTTAT         GCGTGCAGCC ACTCTA GGCTGTACGC          TTCTCTCGTTTTCCC  95 51
AV939_RS16725 NONE
AV939_RS16730 NONE
AV939_RS16735 3951680 .. 3951694 +  -4.2  -3.48593   GCTCCGTTGAATATA               CGCCTA TAT TGGGTG               TTATCTGCGGCAGTA  52 397
AV939_RS16745 3955117 .. 3955137 +  -5.4   -3.1552   TGTGAGTATTTTGTT            CCTTGCTC TAACC GAGCAAAG            TGTTAATCACTACAA  54 219
AV939_RS16750 3955788 .. 3955805 + -14.1  -5.12971   AGTCGCCTAGTTTAA             GCCCCGC CCCT GCGGGGC              TTTTTATTGCCTGTT 100 49
AV939_RS16780 3962780 .. 3962796 +  -9.4   -6.0458   GCATAAATTAAAAAA              CCTGGG CATGA CCCAGG              TTTTTTTTACTTTAT 100 35
AV939_RS16790 3965447 .. 3965473 +  -8.8  -3.63968   AAGCTTCGACATTGC         GCCCAATTGC ACGAAAC GTAATTGGGC         TTTAACCCTTTCGCC  72 135
AV939_RS16800 3967699 .. 3967713 +  -7.8  -2.57501   GTAAGAAAAGTATCA               CGCGCA GCA TGTGCG               ATGTATTTGGTGAGC  62 93
AV939_RS16805 3969365 .. 3969399 + -14.4  -4.43877   TACGCCACTTTATTT     AAAAACCCACATGCGC TTT GCACATGTGGGTTTTG     TTTATTTGGCGATTA 100 53
AV939_RS16810 3970943 .. 3970986 + -14.8  -3.31196   ATTTTAAGGAAATTT GGGCAC-AAAAAAACCGGCAC CTA GTGCCGGTTTTTTTAGTGCGA TTAATCTCGGTTTGC 100 34
AV939_RS16820 3972436 .. 3972446 +  -6.8  -3.73224   TCAGATGCGCTAATA                 GTGC CAA GCAC                 TTTACTAACAAATGA  66 466
AV939_RS16830 3975717 .. 3975732 +  -2.6  -3.41978   TTTCAAAGCACGCTG              CATAGGT TCA ACCT-TG              TTCATTCGGTTGTAC  46 462
AV939_RS16850 3982120 .. 3982149 + -16.7  -3.89822   GCAACCGCGCTGACA       CAAAAAAACCGAC ACAT GTCGGTTTTTTTG        TTTATCAGGTAGATG 100 42
AV939_RS16890 NONE
AV939_RS16895 NONE
AV939_RS16900 NONE
AV939_RS16905 3992739 .. 3992762 +  -5.9  -3.95584   GTATCTGATTGCTGA          GCCGCTTGC ACGAGA GCCAGTGGC           TTTAATTGCTCAGAC  63 225
AV939_RS16915 NONE
AV939_RS16920 NONE
AV939_RS16925 3996722 .. 3996735 +  -9.5  -5.61596   CTAGACATAAAAAAA               CCGGC CTAA GCCGG                TTTTTTTATGGAAAT 100 72
AV939_RS16935 3998161 .. 3998180 + -12.2  -5.75538   TTAATAACCTTACAA            CGCTAGCT TTCC AGCTAGCG             TTTTTGTTTTTTAAC 100 92
AV939_RS16940 3999254 .. 3999279 + -14.1  -3.78436   GCATAGGGTTATAAA         TAAGGCGCTCA CATT TGAGCGCCTTG          TTATTGATATACGTT 100 75
AV939_RS16960 4003046 .. 4003075 + -13.7   -5.7827   ACAGCCAAACAAAAA       TGCGGTTACAGAT TAAA ACCTGTAACCGCA        TTTTTTATTTCTATT 100 79
AV939_RS16970 NONE
AV939_RS16975 NONE
AV939_RS16980 NONE
AV939_RS16985 4008374 .. 4008390 + -11.5  -4.86133   CGAAAGTTTAAAAAA              GCCGCCT GAA GGGCGGC              TTTTTCGTATCTATA 100 47
AV939_RS16990 4009885 .. 4009908 + -12.5  -2.73542   AGCCTGATAACCGCG          GTGACGAGC GCATTA GCTCGTCAC           TGGTTACGCCTTCGC  82 34
AV939_RS17035 4022933 .. 4022958 + -19.1   -5.4182   GTTTTAACAAAAAAA         CGGCGGTGCTT TTAA AAGCACCGCCG          TTTTTATTTATACTT 100 70
AV939_RS17050 NONE
AV939_RS17055 NONE
AV939_RS17060 4030029 .. 4030047 + -14.6  -3.04089   CTGCCCATTAAAAAA             GGCGAGTG ATC CACTCGCC             CTTTACTTATTGCGC  95 85
AV939_RS17070 4031706 .. 4031718 +  -7.7  -2.55253   ATGGGTACATCTACT                TTGCC GCT GGCAA                TCACTTCGCCTTGCT  59 136
AV939_RS17090 4036433 .. 4036447 +  -3.5  -4.04394   GGTGCGCAGCTTCGA               GTTGC CGAAA GCGAC               TTTCATTAATTTGCA  57 403
AV939_RS17100 4037992 .. 4038024 +  -4.2  -4.23045   CTTCAAGGCTTTTAC     CCTGTGCTTTCTGCG CTTT CACA-AAAGCAAAGG      TTTCTTCAATCATTG  62 318
AV939_RS17170 4053253 .. 4053269 + -13.7  -4.74801   GCACTGTAAGAAAAA              GCCCGCT TAA AGCGGGC              TTTTTAATGGCATTA 100 84
AV939_RS17185 4057733 .. 4057751 +  -3.8  -4.07568   ACTTATTCGAGAACG             TTTGAGGC TCT GCCTTGAG             TTTTGAGCAAAAAAA  59 21
AV939_RS17190 4061126 .. 4061183 + -10.1  -4.20454   TAACTCACACAAAAA CGCCGCTTGTACAATGGCCTATCTC TCGTACATTT GAGATAGGACATAGT-C-AGCGGCG TTTCATTATTTCTTC  86 45
AV939_RS17205 NONE
AV939_RS17210 NONE
AV939_RS17215 NONE
AV939_RS17220 4069469 .. 4069479 +    -4  -4.57837   AGTACTAGATTAAGG                 CTTA GGC TAAG                 TTTTTGCCCAAATGT  66 54
AV939_RS17225 4070492 .. 4070509 + -11.3   -5.5112   TCTCTATAAAAAAAA             GCCACGT TAAA ACGTGGC              TTTTTTGTTGGTCCG 100 52
AV939_RS17235 4072482 .. 4072499 + -11.3  -3.16323   GCCCATTATTAGTAA             GTAGCGG GTTT CCGCTAC              TTACTCCCCCCTTTT  80 40
AV939_RS17240 4073052 .. 4073067 +  -4.8  -2.92513   AAAAAATGTTAATTA              TTAAAC TTTT GTTTAA               TGCATTTTTTACACT  51 46
AV939_RS17245 4074600 .. 4074614 +    -5  -4.08394   TAACTGGGCTTTGCC               CTAAAG GCG CTTTGG               TTTTAACAACACTAT  63 514
AV939_RS17270 4082576 .. 4082593 +  -7.7  -3.14132   ACTTTACCCATGGTG             CCCCAAG CTGA TTTGGGG              TTAATAAGCACAGGA  64 125
AV939_RS17280 NONE
AV939_RS17285 NONE
AV939_RS17290 NONE
AV939_RS17295 4086763 .. 4086776 +  -5.2  -3.71848   GAGATGCGATCAATA               CCGC TTGTGT GCGG                TTATTAATGCCAAGC  59 62
AV939_RS17310 4090770 .. 4090789 + -12.1  -5.35721   AGCAGTAATGACTAC            GGGCGCC TTTTTC GGCGCCC             TTTTTATTCTTATCT 100 51
AV939_RS17315 4092942 .. 4092966 +  -9.3  -3.21962   TTTAAAACGACATAA          GGCAGGTGC AAAGTAA GTACCTGCC          TTAGCTTACTGCTGT  75 66
AV939_RS17415 4115985 .. 4116037 +  -2.2  -2.78384   ATAAGACCCTTCGTC ACTT-TTGTAAGTCAGAGTAGGTAA TCCT TTATTTACTCTGACTATCGATAAGC TATGATGCCGAACAA  41 90
AV939_RS17420 4117054 .. 4117067 +  -3.9  -4.11295   AAGCTCGGCATTCAA               CAAAT CGAC ATTTG                TTTCTATCGCTTTCA  59 165
AV939_RS17440 4122211 .. 4122228 + -12.7  -3.25072   TTGAAAACAAAAAAA             GCCGAGC ATGT GCTCGGC              TTAAGTTATAGTCCA  95 61
AV939_RS17650 4174636 .. 4174664 +  -6.8  -5.42259   CATTAAAACAAAAAA       TCCCGTTATCGCT CAAA AACGA-AACGGGA        TTTTTTTAGCACTAA  89 67
AV939_RS17670 NONE
         fre 4181195 .. 4181216 + -10.1  -4.27519   CGATACATACAAAAA           GGGCACGCT ATCA AGCATGCCC            TTTCTATTATAGGCT  86 97
AV939_RS17680 NONE
AV939_RS17685 4184141 .. 4184163 +  -2.6  -4.18488   CTTAGAAGCCTTAAG           CGCGTCGGCA AAT TGTTGATGGG           TTTGTTGAGATAAAT  58 420
AV939_RS17695 4185801 .. 4185815 +  -3.5  -3.33815   AAGACAAAATTCTAC               CGGGA AAAAA TTCCG               TTAATTAAGGAGACT  48 3
AV939_RS17700 NONE
AV939_RS17705 4188671 .. 4188694 + -13.9  -3.19018   AACAGCATTAGTAAC          GAAGGGCCC CTAACA GGGCCCTTC           TTGCATTAGCCTATT  95 480
AV939_RS17720 4192052 .. 4192075 +   -14  -3.41878   ATAACCACGTGGCTA          TTGGCAACCT ACAA AGGTTGCCAA           TTATGCATTAACGCC 100 57
AV939_RS17760 4200272 .. 4200291 +  -2.1  -4.88407   ATAGTAAGTAAACTT            GGCCA GTTTTTGCTA TGGCC             TTTTTAATTGGGTCG  66 45
AV939_RS17765 NONE
AV939_RS17770 NONE
AV939_RS17775 4204248 .. 4204280 +  -9.4  -5.64274   CCCATAAAACTGGAA      TAAAGAAGCACTAA GGTAA TTAGTGCTTTTTTG      TTTTTTTGTAACTGA 100 64
AV939_RS17780 4205851 .. 4205877 +  -9.5   -4.6951   ACTTATAGAATGTAA         GGCGATATTCA TTTGT TGATTATCGCC         TTTCTTTTACATCCT  90 104
AV939_RS17790 4211720 .. 4211738 + -13.1  -5.28176   ATTAGCGTTTATCAA             GCCGGCG TAAAT CGCCGGC             TTTTTTATGCCTAAC 100 55
AV939_RS17800 NONE
AV939_RS17805 NONE
AV939_RS17810 NONE
AV939_RS17815 4218518 .. 4218536 +  -3.1  -4.24002   GTCATAGCAGATTAA             GGAGG TTAAGCAGT CCTCC             TTTTACCATTTAGAA  60 34
AV939_RS17820 4219486 .. 4219509 +   -14  -4.70583   AACCACATAAAAAAA          GAGCGCATTT AAAT AAATGCGCTC           TTTTGTGTTACTAGC 100 31
        rpmE 4225186 .. 4225199 +  -9.5  -5.76633   GTTTCTTTAAAAAAA               GCGCC TATC GGCGC                TTTTTTTGTGTCTGC 100 63
AV939_RS17855 4227247 .. 4227264 +  -9.9   -5.6473   AAGATTATAAAAAAA             CGGCAAT TTTC ATTGCCG              TTTTTTTAATCTTCT 100 81
        metF NONE
AV939_RS17870 4229682 .. 4229705 + -15.4  -4.83269   AGAGGAATAAAAAAA          GGCGTTGTAG GAAA CTACAACGCC           TTTTTAGTATCGTAT 100 31
AV939_RS17885 NONE
AV939_RS17890 4232158 .. 4232168 +  -2.4  -2.79302   CGGACCCGCCACATT                 CCAG TTT CAGG                 TATAATGAACATACT  41 10
AV939_RS17895 4233224 .. 4233237 +  -9.5  -5.20154   ACACATACAAAAAAA               GCGCC AGTG GGCGC                TTTTTTCAATTATAT 100 84
AV939_RS17905 NONE
AV939_RS17910 4237842 .. 4237852 +  -3.2  -3.30007   TATCAACCTCACGCT                 GCTG CTT TAGC                 TTATCGAGCAGTGTT  48 523
AV939_RS17930 4241604 .. 4241614 +  -8.2  -2.91924   TTACGGTTTCATCAT                 CGGC TTC GCCG                 CTTTCTAACAAGTAA  61 241
AV939_RS17945 4243169 .. 4243192 + -12.5   -2.7204   GACTGAATTAAGTGA          TGTCGCCAC CTTAGA GTGGCGACA           TCCGTTTATGACTTA  89 70
AV939_RS17955 NONE
        dksA 4245993 .. 4246033 + -11.4  -2.82253   TAAACCTTCGTAGTA AGTTACACGCCTC-ATAGT ATTT ACTATAGAGGTGTGTAACA  GTATTTCTATTAATG  81 41
AV939_RS17965 NONE
AV939_RS17970 NONE
AV939_RS17975 4249074 .. 4249087 +  -3.1  -3.25823   GTTCGCCCCATTATT               CTTTC CCTG GAAGG                TTGCTATGAAGAAAA  48 57
        panB NONE
AV939_RS17985 4250793 .. 4250814 + -13.7  -3.19602   ATACCCAATAAAAAA           GCCCTCGCA TTCA TGCGGGGGC            TCTTAATGTAAAGCG  95 70
AV939_RS17995 4253785 .. 4253805 +    -4  -4.60041   CATTAAGTCTGTCAT           TGCT-GCAC TACC GTGCCAGCG            TTTTTGCACCTGGGT  69 278
AV939_RS18015 NONE
AV939_RS18020 4259880 .. 4259894 +  -7.2    -3.481   TACAAAATTCGTGCA               TGAGAA TTA TTCTCA               TTAGTATTTACATTC  66 133
AV939_RS18025 NONE
AV939_RS18030 NONE
AV939_RS18035 NONE
AV939_RS18040 4265510 .. 4265522 +  -6.3   -5.1101   TGGCATAGAGCCTAG                TATGG TCA CCATA                TTTTTTGCATACTCA  83 311
AV939_RS18060 4270557 .. 4270588 +  -8.1  -4.58663   GGATCATAATTTCAC      ATGTTCGAATCAC CTTGGT GTGGTTCGAACAC       TTTTTAGCACATGCT  86 32
AV939_RS18065 4272429 .. 4272444 +  -6.1  -3.15427   CATTTGGGATGCTAA              CCGTC ATTATC GACGG               TTAGTCGAAACTATT  57 58
AV939_RS18100 4279394 .. 4279423 + -13.7  -3.35901   TAAACCTACAGACAC       AAAAAAGGCGCTC CAAT GAGCGCCTTTTTC        TTAATGCTTTGGTTT 100 149
AV939_RS18180 4301529 .. 4301548 +   -10  -5.76633   TAATATCATTAACGA            GGCGGCAA TTCA TTGTCGCC             TTTTTTTATATCTGC 100 52
AV939_RS18210 4306957 .. 4306977 + -11.9  -3.03884   GGAAATGCCATAAGG            CAGGGTGTG TGT CACACTCTG            GTTTCATGTTTTAAC  87 28
AV939_RS18215 4307454 .. 4307468 + -11.4  -5.42862   TCTTCTGATAAACAA               GCAGGC TTG GCCTGC               TTTTTTTCCAACTAT 100 92
AV939_RS18220 4309644 .. 4309656 +  -6.3  -4.42619   GCAGTATTGGCTGAA                GCAAT AAC ATTGC                TTTTATCCCCTATTC  72 19
AV939_RS18225 4310116 .. 4310130 +   -10  -4.93696   TTCAAAATAAAAAAA               CCGCTT CAA AAGCGG               TTTTTAGTGTTTGCC  93 31
AV939_RS18250 NONE
AV939_RS18255 4315377 .. 4315395 + -14.6  -5.46657   TAGATTCATAAAAAA             CGGGCAAC TTT GTTGCCCG             TTTTTTATTGCGCTC 100 54
AV939_RS18280 NONE
AV939_RS18285 NONE
AV939_RS18290 4325869 .. 4325888 +  -9.3  -4.79756   CGCGACAATAAAAAA            GCAAGGC ATACTC GCCTTGC             TTTTTGAATTATGTA  90 58
AV939_RS18300 4328655 .. 4328671 +  -5.7    -2.752   TAGGAAACTTGCCAG              CGCCTTC TGA GTGGGCG              ATTATCTATGCGGAT  52 218
AV939_RS18305 4330090 .. 4330107 +  -6.3  -3.67188   TGCCTTTGGCGTCTG             CGGGTAA AAAC TTACCTG              TCTTTTCAGCTAAAT  62 452
AV939_RS18335 4334760 .. 4334787 +   -15  -4.40132   GGCAGATTAAAAAAA        GCGGGTGACTTCT GTT AGAAG-CACCCGC        TTTATTGTGGTTGAT 100 31
AV939_RS18410 4353240 .. 4353255 +  -2.4  -4.13014   AGGTCTTCATTGGTA              GCGAGT GTGT GCGCGC               TTTTCGGGGTCTGGG  55 440
AV939_RS18430 4356330 .. 4356343 +  -3.1  -2.72991   AAGCGGGTAAACATC               TGTCA TTAA TGACG                TCATTACCAATATAA  44 44
AV939_RS18435 4356841 .. 4356856 +  -3.2  -2.61216   TACCGTTGCAAAGGA              GCACTC CCAT GAATGC               TGAATTCGTTAATCC  43 7
AV939_RS18440 NONE
AV939_RS18445 NONE
AV939_RS18450 4359043 .. 4359059 + -10.8  -5.52023   CTCAGACACAAAAAA              GGCGCC TAATT GGCGCC              TTTTTTATTGCTCAT 100 47
AV939_RS18480 4364432 .. 4364464 +  -4.2  -2.71364   TTGTTTTAAACGCTC     GGCCCCACG-AAT AACAACCA GTTGCGTGGGGTC      TACTTCACCAAATAC  45 91
AV939_RS18515 4372251 .. 4372268 +    -7   -2.9818   GCTAAAAAATAAACA             GCACAG ATTATC CTGTGC              GTTTATCCGTGTTAA  61 107
AV939_RS18580 NONE
AV939_RS18585 4392262 .. 4392279 + -12.7  -5.90231   TACAAACATCAAAAA             CGGGAGC TTAC GCTCCCG              TTTTTTTATATTTAT 100 134
AV939_RS18620 NONE
AV939_RS18625 NONE
AV939_RS18630 4403187 .. 4403202 + -11.8  -5.69793   TCAATAATACTAACA              GGCGGC CTTG GCCGCC               TTTTTTATTTAATAT 100 34
AV939_RS18640 4405184 .. 4405204 +  -6.1  -3.78861   CCAGTAATCGTTTGA            GGCGAGC CAACTGC GTTCGCC            TATTCTTTTCTATAC  64 34
AV939_RS18645 4406081 .. 4406091 +  -8.2  -2.82234   CTGTGTTCGTCTCAT                 GGGC TGA GCCC                 TGTCCTCCCATTTCT  66 92
AV939_RS18650 4409715 .. 4409733 +  -3.7  -4.18762   TTACAAAACATAACT             CGACGTG GCCAA CGCGGCG             TTTTAGATAACCATT  59 478
AV939_RS18655 4412452 .. 4412482 + -10.6  -2.56715   GCGCAATAGCAAAGC      TT-CTGCCGCTTG CACACT CAAGCGGCAGCAA       TAAATTGATAAAGAT  76 32
AV939_RS18660 4415583 .. 4415609 + -18.1  -5.28778   CTAGAAAAAATAAAA         GCGGCGTAGAG TTAAC CTCTACGCCGC         TTTTTTGTAACTGCT 100 115
AV939_RS18670 4419939 .. 4419955 + -10.8  -6.11243   TACATGTGTGTTTAA              GGCGCC TATAC GGCGCC              TTTTTTTTGTTCGCT 100 51
AV939_RS18705 NONE
AV939_RS18710 NONE
AV939_RS18715 4431822 .. 4431837 +  -4.6  -4.96848   GCATAAAGAGAAAAA              GGCGCG AGCA TGTGCC               TTTTTCTCTCACCCG  73 99
AV939_RS18725 NONE
AV939_RS18730 4435295 .. 4435305 +    -4  -4.62203   AGCTAAGCACAGATC                 TAAG CGT CTTA                 TTTTACTTCTTTAGC  66 111
AV939_RS18765 NONE
AV939_RS18770 4440856 .. 4440885 + -12.2  -3.09732   TAACTCGCGTTCTGT       CACTGCTACCGC ATTCCG GCTGTAGCAGTG        CTTTTCCACTCCTTA  87 38
AV939_RS18790 4446751 .. 4446769 + -11.6  -5.50499   TATACCTCTGATTTT             GGCCCGCC TTT GGCGGGCA             TTTTTTTGCGTGTAG 100 290
AV939_RS18800 4448142 .. 4448155 +  -5.3  -4.40561   AAGTGCAGTTCACAA               TAACC ACTC GGTTA                TTCTTTTTAAAGGAG  69 208
AV939_RS18805 4448409 .. 4448422 +  -9.5  -5.76633   TGCAATACAAGAAAA               GCCCC ATTT GGGGC                TTTTTTTATGTATAA 100 66
AV939_RS18825 4452114 .. 4452126 +  -6.3  -2.64274   ACGTTTTCCATAGCC                GCATA TTC TATGC                TCGCTTTGAAGACAT  53 173
AV939_RS18850 4456794 .. 4456806 +  -6.3  -3.62864   CTGGGTGGATAGGTG                CTATG GAT CATAG                TTTGGCCTCGATTTC  62 482
AV939_RS18875 NONE
AV939_RS18880 4459852 .. 4459867 + -11.8   -4.7629   TTAATAAATAACAAA              GCCCGC TGAT GCGGGC               TTTTTACGTTAATAG 100 51
AV939_RS18895 4464380 .. 4464416 +    -6  -4.91712   GCTATCGAGAAAAAA   GCGAGGCAAACGCTA CAACTTAA TAGA-TTTGCCTCGC    TTTTTGTAGGTTGGG  79 44
AV939_RS18905 4466781 .. 4466799 + -13.2  -5.18726   TGAAGCATAAAAAAA             GGGCATCA TGA TGATGCCC             TTTTTCTTGTCAAAC 100 63
AV939_RS18915 4469471 .. 4469489 +    -6  -5.05782   AAATGATCGTTAAAC             TTTAAGCC TAA GGCTTATA             TTTTTTACGCTAACT  80 21
AV939_RS18935 4474581 .. 4474611 + -17.2  -3.73936   AAACGCCAATTCAAA       TAAATAAGCCTGTT AGA AACAGGCTTATTTA       TTGTTACTCAGGTTT 100 41
AV939_RS18955 NONE
AV939_RS18960 NONE
AV939_RS18965 4479823 .. 4479841 +  -8.2  -3.23855   TTTCGTGCTCACTAG             GCTTATTC AGA GAATAGGC             GTTATTTTTCCAAAA  70 26
AV939_RS18985 4484877 .. 4484902 +   -12  -4.47707   AAAATTTGACGTGTA         GAATGGCAGT ATAAAC ACTGCCATTC          TTGTTTTTGCTAACG 100 65
AV939_RS19000 4487681 .. 4487696 +  -3.2  -3.17075   AAAAGGACAAACCTT              CCGATG GTTC CATGGG               TTAAATTGGGCACAG  46 209
AV939_RS19005 4488562 .. 4488575 +  -5.2  -2.79183   CTGCGGAATAAGGCT               GGCG ATAGCG CGCC                TATAATCCGACTGCG  49 223
AV939_RS19030 4494909 .. 4494943 +  -5.1  -5.40873   TGGGCATAATTTAGT    GCGTATGCAGCTTATT GAAT AATAAGCTGCCGA-GC     TTTTATTTTTCTATT  82 4
AV939_RS19050 4499459 .. 4499471 +  -5.5  -2.81339   GTTTCACATCAGATG                CCATG GCA CGTGG                GTTGTATTGCATAAT  50 227
AV939_RS19080 NONE
AV939_RS19090 NONE
AV939_RS19095 NONE
AV939_RS19100 4509300 .. 4509333 + -12.5  -2.57564   TGTGTAAGTAGCAAG     TGGTTGGCTTAGCAT CAAT ACGCTAAGCCGACCG      ATTATAAACACGTAG  89 75
AV939_RS19125 4516451 .. 4516471 +  -3.4  -3.54297   AGCCTTTGCTGAACA            TGTTGAAA ATACG TTTTAACA            TTATGATTGGTGAGT  49 7
AV939_RS19130 4517498 .. 4517510 +  -2.7  -3.45632   CTGATTAGACCAGTA                TTTTG CTG CGAAA                TCTTTCACTATCTCT  47 153
AV939_RS19135 NONE
AV939_RS19140 NONE
AV939_RS19145 4519936 .. 4519962 + -11.6  -4.52589   TAACAGCATCAAAAA         TCAGTGCCGTGC TTT GCATAGCACTGA         TTTTATCTCCCCCCA 100 38
AV939_RS19150 4521495 .. 4521519 +  -8.7  -2.53382   CTTACTGAAGTATGG          TAGTGTTTACT AAC AGTAAGCGCTA          TCGATTACCGCTCAT  67 202
AV939_RS19155 4522159 .. 4522170 +  -2.2  -3.76781   CTTATGCTTTAAATT                CTGG CGCA TCAG                 TTTGATCACCTCTTT  51 168
AV939_RS19170 NONE
AV939_RS19175 4525864 .. 4525879 + -10.4  -4.87318   TTAGAATATTCAAAA              CCTGCC TTGC GGCAGG               TTTTTGCGTTTTAGG  93 201
AV939_RS19180 4526259 .. 4526295 + -11.6  -5.09426   TGAATTATTGAAAAA   GCCCCGGTCTCGC-TCA TGTG TGAAGCGACACCGAGGC    TTTTTTGCCATTAAA 100 46
        prmA 4530345 .. 4530359 +  -4.2  -2.97425   ACGTACACTTAGCGC               CCCG TTTTAGC CGGG               TGTATAAATTCTGTG  49 212
AV939_RS19200 NONE
         fis 4531741 .. 4531758 + -11.3  -5.27335   GCCTAGCCCACCGAA             GAGCACC TACA GGTGCTC              TTTTTGTTTCACCAC 100 50
        purH 4533841 .. 4533856 +  -4.7  -3.12327   ATGCCTTCTGCTCTC              GCTCT TAGCTT AGAGC               TCTTAACTCTGAGCA  52 470
AV939_RS19215 NONE
AV939_RS19220 4536199 .. 4536226 + -21.4  -5.42975   AAAAGTATATTTAAA        CGCCGCCTAAGC GAAT GCTTAGGCGGCG         TTTTTGTTTGTATCA 100 66
AV939_RS19230 4538335 .. 4538347 +  -4.8  -3.15574   CAAAACAAGCCATAC                CACC GAGTA GGTG                TATTGCTCAGCTTGA  52 297
AV939_RS19240 4541837 .. 4541855 +    -6  -5.32699   CTGAATTTAAAAAAA             GGGCTT TCATAAC AAGCCC             TTTTTTAATGTTTGG  84 66
AV939_RS19245 NONE
AV939_RS19250 4546301 .. 4546332 + -13.1  -4.67353   TTCTAGCGCAAACAT      CGACCACCACCTT ACATAA AAAGTGGTGGTCG       TTTTTACCTACCTGC 100 35
AV939_RS19255 4547691 .. 4547718 +  -7.8  -4.82128   ACTATTTGTAACAAA        GAGAGGAA-GCCT TTC ATGCATTCCTCTC        TTTTGTATTTGGTGA  84 90
        ompR NONE
AV939_RS19265 4550301 .. 4550317 +  -3.7   -4.1196   TTCGAGATTGTTCAC              CGGTA AAGCCGA TACCG              TTTTGGGCATAGCTT  59 468
AV939_RS19290 NONE
AV939_RS19295 NONE
AV939_RS19300 4559180 .. 4559201 +  -2.9  -3.25942   CCTCTTTAGAAGAAG           TCCTGCGTG TAAC CAAGGAGGA            TTAGTATGGCCGCCT  46 0
AV939_RS19305 NONE
AV939_RS19310 4560861 .. 4560871 +    -4  -3.22215   GAACATTAACGAATA                 CTTA AAC TAAG                 TCATTTTATGCTTGG  49 16
AV939_RS19315 4561499 .. 4561516 +  -4.1  -3.09968   CCCTTTTGAGAGCCC             CGAGC AATGAAGC GCTCG              TCTTCGCATTCGCTC  48 16
AV939_RS19320 NONE
AV939_RS19325 4562601 .. 4562618 +  -4.1  -3.23692   AGCGCACTACCTTCT             CGCCA ACAAGGCG TGGCG              TTAATGATAGTGCTG  49 100
AV939_RS19330 NONE
AV939_RS19335 NONE
AV939_RS19340 NONE
AV939_RS19345 4566380 .. 4566396 +  -8.1  -3.09175   AGCACATCAGCATGC              TTAGCAA AGT TTGCTAA              TGTTCCATCCGCATT  62 394
AV939_RS19370 NONE
AV939_RS19375 4571667 .. 4571678 +  -2.2   -3.0752   ACACGTTAGGTTATT                TGGT CTAT GCCA                 TCTTCGAGTAGTCTC  43 40
AV939_RS19380 4572333 .. 4572367 +  -8.7  -5.28176   GCCTTTTTCAAAAGA    GCCGGG--GCTTTACCT TTA AAGTAAAGCAGCCCGGC    TTTTTTGTGCCTACC 100 45
AV939_RS19395 4577293 .. 4577311 +  -9.5  -5.63374   TCCTAAAGAAAGGTA             GCCGGGT CACTC GCCCGGC             TTTTTTTGGTCTTCA 100 65
AV939_RS19420 4581826 .. 4581843 +  -4.9  -3.85698   GCATAAATCTTGAAA             TACTTCT CTAA AGGAGTA              TTTATGAAAACCGCA  60 280
AV939_RS19425 4583250 .. 4583260 +  -3.2  -5.05601   GAAATGCGACGCTGT                 CAGT ACT GCTG                 TTTTTATCTGTCATA  74 283
AV939_RS19440 4585251 .. 4585274 + -11.8   -5.1675   CCACTACTAATAAAA          GCCGATACTT TTTA AAGTGTCGGC           TTTTTTAATGCGTAA 100 88
        greB 4586463 .. 4586485 +  -2.6  -2.77895   GCTGCTCCTGACCCG           TCGCGGTGGT ATA ATTGCCGCCA           GTTATTCCAACTAGA  42 83
AV939_RS19455 4588999 .. 4589016 + -11.3  -5.56264   AGTCAGCGTTTTAAA             GCCAGCA TGCA TGCTGGC              TTTTTTGTATTTGCA 100 81
AV939_RS19475 4592755 .. 4592769 +  -4.2  -4.14392   TGTAGTAATTGTTCA               CCACCA TAT TGCTGG               TTTTGAACATTGGCA  59 338
AV939_RS19485 4595821 .. 4595834 +  -3.9  -3.38314   GAAGCCGGTGAGCAT               TCTTA CTAC TAAGA                TGTTGTATCTCACTT  51 14
AV939_RS19490 4596231 .. 4596244 +  -2.3  -3.40134   ACGATATGTTTATGA               CGGTT TTTG ATCCG                TGTTTGCCGTGCTTT  46 173
AV939_RS19495 NONE
AV939_RS19500 4597423 .. 4597435 +  -4.8  -3.32343   CCTTGAGCGTATAGA                CAGC CTTGA GCTG                TTATAAACATCTACG  54 59
AV939_RS19505 4598169 .. 4598179 +    -4  -4.41237   AATAGTCGGGTATTT                 TTTG ATT CAAA                 TTTGTATTGTTTGCT  64 36
AV939_RS19510 4599278 .. 4599291 +  -5.3  -2.61199   TTAGGTTAGCTGTCA               CACAA TGCA TTGTG                CTTACTTAACCGTTC  51 74
AV939_RS19520 4601953 .. 4601967 +  -2.1  -3.08642   AGTGCATGAACAAAA              C-GCAC AAAA GTGCCG               TTCACTGACTGCTCT  43 51
AV939_RS19555 4606684 .. 4606721 +  -2.6  -5.14965   TCGGCACCGGTTTAA   TTACGCCAAACCCTCG ACCTTA CTAGGGTTTGACGGCA    TTTTTTAATCGGCAT  70 0
AV939_RS19590 4615450 .. 4615474 +  -2.7  -4.58773   CTCTGCATGACATTG          CACGAGATGTG GTA CACTTCTCCCG          TTTTAATTTCATAGG  62 119
AV939_RS19595 4618033 .. 4618061 + -13.2  -5.59655   CGATGCCACAAAAAA        GCCGAAACGTTG AAATA CAACGCTTCGGC        TTTTTTATTAATTTG 100 109
AV939_RS19615 NONE
AV939_RS19620 4625461 .. 4625472 +  -4.4  -3.58162   CTCTAACGCTACCAT                GCTA ACGA TAGC                 TTCATTTCCTCCTAC  55 315
AV939_RS19630 4627811 .. 4627831 + -16.9  -5.28778   TATATAAGCCCTCTT            GCCCGACCA ATT TGGTCGGGC            TTTTTTATGCCTACT 100 65
AV939_RS19645 NONE
AV939_RS19650 4637287 .. 4637298 +    -3  -2.71712   CGAAAAAGCGACAAA                TTAG TTAA CTAA                 CTTTGACGGGGCGGC  41 22
AV939_RS19665 4639263 .. 4639279 +  -2.2  -4.13995   ATAAAACTCGGGCGC              CGTTGG AACAA CCAAAG              TTTCGTTTGTGACCC  55 333
AV939_RS19690 4645199 .. 4645236 +  -8.3  -5.71712   TCAGTTATCTGCTAA   AAACCACAAGCAGGGCC TAAC GGCGCTGCTTGTGGCCG    TTTTTTTATGTACCG 100 53
AV939_RS19695 4645788 .. 4645807 +  -9.3  -5.36441   TGTTACTGATTTAAA            GCACTGC CACTTC GCAGTGC             TTTTTTGTATCCCCC 100 89
AV939_RS19700 4646456 .. 4646478 +  -2.1  -2.64155   TGAACTTCAAACGTT          GG--GCTTCAT TGA ATGAAGCTGCC          TGCGTTTCAAAAAAG  40 233
AV939_RS19705 4647999 .. 4648009 +  -6.8  -3.85114   TAACGCCATGCTAAA                 TGGC AGC GCCA                 TTTGCTCTGCACTTT  67 160
AV939_RS19720 NONE
AV939_RS19725 4651494 .. 4651510 + -10.9  -2.91924   TGGCGAAGGGATGCC              GCTCAGT TGT ACTGAGC              ATTTATAAAAGCTCG  79 149
AV939_RS19730 4652956 .. 4652978 +    -4  -2.71001   ACAAACAATAATGGA           AAGGCCTTGA GTA TCAGGGCCAC           ATTAATTTCAGGGTA  45 30
AV939_RS19735 4653611 .. 4653624 +  -5.2  -3.41569   TAGTTGTTTTTCTGG               CGCG ACTTAA CGCG                TATTTGAATCGCTAA  56 38
AV939_RS19740 NONE
AV939_RS19745 4654470 .. 4654488 +  -4.4  -3.31792   TATTCATGTAGATGA             CAGCAAGC ATG GCGCGCTG             TTGTCCCCATACTGA  52 65
AV939_RS19750 4655653 .. 4655680 +   -12  -3.14881   GTTCTGGACAACGAA        GCCCCAACGCGT CTAA ATGCGTTGTGGC         TTCATCAAAGGCTTG  83 238
AV939_RS19770 4658261 .. 4658277 +  -9.4  -5.00138   TTAAGTTTTGTTAAA              GCCGCT ATTAC AGCGGC              TTTTTACTTTCAATG  91 55
AV939_RS19780 4659589 .. 4659612 +  -3.8  -2.62184   AGTTCGGTTTCAGAC          ATTTCATCGG CTAC CCGATGATAC           TGCTGTGGCAACAAG  44 180
AV939_RS19800 NONE
AV939_RS19805 NONE
AV939_RS19810 4670295 .. 4670318 +  -9.6  -3.38224   ACACATGAACAAAGC          GAAACAGCGC TATT GCACTGTTTC           TATTTACGATAAACT  77 119
AV939_RS19815 4670940 .. 4670955 +  -7.5  -6.23209   ATCACACAGAAAAAA              GGGCC AATAAA GGCCC               TTTTTTTTTGGTTAA 100 16
AV939_RS19835 NONE
        rpmH NONE
AV939_RS19950 4695256 .. 4695267 -  -4.4  -3.16914   ATGATGGATGAAAAC                GACA GCGT TGTC                 CTAAAATAGGAGATA  50 83
AV939_RS19945 4693383 .. 4693403 -   -14  -4.52589   TCCTCGTAGACAAAA            CAGCCCGC AATTG GCGGGCTG            TTTATTATAAAAGAA 100 51
AV939_RS19940 NONE
        trmE NONE
AV939_RS19930 NONE
AV939_RS19925 NONE
AV939_RS19920 4689413 .. 4689426 -  -2.5  -4.62069   TTGTGATCGGAAAAA               TAATT AAAA AATTA                TGGAGGAATCAAAAA  62 147
        gidA NONE
AV939_RS19910 NONE
AV939_RS19905 4685474 .. 4685487 -  -3.7   -3.1355   TTTATTTATATTTAA               CTGGC TTTC GCCTG                ACTTGGCGCAGATTT  48 8
AV939_RS19900 4684465 .. 4684478 -  -8.1  -2.95126   TATAACCGGAAAGGA               GGCTG TCCA CAGCC                CGAGTTTTAGGAATG  67 89
AV939_RS19895 NONE
AV939_RS19890 4682975 .. 4683007 - -11.3  -3.14881   GAACTCGGTTATCAA      CCGCGCCGATATTTC CAG GCAATACCGACACGG      GTTAATGCTTATTAA  80 37
AV939_RS19885 NONE
AV939_RS19880 4682156 .. 4682170 -  -2.8  -2.52543   ACGGTTGTCAATTCA               GACATG GCT CATCTC               CCTCTTAAAGCTCAG  41 30
AV939_RS19875 NONE
AV939_RS19870 4680032 .. 4680069 -  -5.5  -3.09516   TCTCCGATTACTCAA   CGTGAAGCCGATGGTGT TTAC ACATCATCGGCTGCATT    GATTACCAAGTTTGT  54 28
AV939_RS19865 NONE
AV939_RS19860 4677707 .. 4677723 - -12.3    -3.214   GTTAGCACATTAATA              GGCTGAC AGA GTCAGCC              ACATAATTATGCTTT  87 32
        atpC 4677218 .. 4677233 - -11.8  -5.96894   ATTTAAATAAAAAAA              CCCGCC AAAA GGCGGG               TTTTTATGAACAGCT 100 47
AV939_RS19850 4676147 .. 4676165 -  -2.4  -3.68529   AGCTGACGAGCTAAA             TCAACGTT TCA ACCATTGA             CACCAGTCCCCACGA  48 2
AV939_RS19845 4675027 .. 4675039 -  -4.1  -2.59881   TACTTACTCTATAAG                CTACC CGT AGTAG                AAGTATTCTACAAAT  45 13
AV939_RS19840 4674384 .. 4674396 -  -4.1  -3.93695   CCCACCAGCGAGAAA                CCTAA CCC CTAGG                CATCCATTGGAATAA  57 21
AV939_RS19830 4673377 .. 4673391 -  -7.2  -3.86346   CTACTGTGTGATAAA               TTATGC CAA GCATAA               GTCCATATAATTACT  70 36
AV939_RS19825 4671893 .. 4671914 -  -3.7  -3.78409   TGAACGTAAGCTAAA           CGGCT-GC CTGTAGT GCTAGCCG           TGGGATGCCTTACTT  55 245
AV939_RS19820 4670940 .. 4670955 -  -7.5  -5.43414   ATCACACAGAAAAAA              GGGCC AATAAA GGCCC               TTTTTTTTTGGTTAA 100 50
AV939_RS19795 4662718 .. 4662753 - -13.4  -5.32882   CACTATGACAAAAAA    GCCCATTGAGGTGCAA CGCA TTCCACCCCAATAGGC     CATATATCATCTAAG 100 53
AV939_RS19790 NONE
AV939_RS19785 4658980 .. 4658997 -  -4.1  -4.57882   TTCAATAACAATAAA             TTCAACG AGGG CGGTGAA              TGTTTTCAATACATG  66 508
AV939_RS19775 4658261 .. 4658277 - -10.1  -3.54459   TTAAGTTTTGTTAAA              GCCGCTA TTA CAGCGGC              TTTTTACTTTCAATG  79 52
         rph NONE
        pyrE 4655721 .. 4655739 -  -5.3  -3.71378   GACGCCATACTTAAA             TACCGTA GGTTT CACGGTA             AGTATTTATCGCCTT  62 2
AV939_RS19755 4655205 .. 4655216 -  -5.8  -3.40146   ATAAGAGAAAAACTA                CCAC TGTT GTGG                 GCAGAATAGGTTATT  56 265
AV939_RS19715 4648287 .. 4648300 -  -2.3   -3.8709   AAACTTGTGCATAAA               TGCCC CTCA GCGCA                CGTAAATTAACCGGT  50 96
AV939_RS19710 4647588 .. 4647599 -  -4.4  -3.41962   CTTAATAAATCAAGA                GCAT AGTG ATGC                 ACAGCGAGACCTTGT  52 401
AV939_RS19685 NONE
AV939_RS19680 NONE
AV939_RS19675 NONE
AV939_RS19670 4638745 .. 4638757 -  -6.3  -2.53263   TCTAGGCGCAAGTTA                CTTAG ATG CTAAG                TTTCAATGGCGTCTT  53 255
AV939_RS19660 NONE
AV939_RS19655 4636931 .. 4636959 -  -6.8  -4.40132   ACTAATGAGAACAAA        CTGTCAGTAACC GGTCA GATTAATGACAG        GTTAACGGCTGAATA  74 396
AV939_RS19640 4629225 .. 4629264 - -10.1  -5.20606   AAAGATGAACAAAAA  GCCGCC-AGTTTCACG CTATTTGGT CGTGGAACTTGGCGGC  TCTGGCTGTTTTTGA 100 61
AV939_RS19635 4627666 .. 4627676 -  -5.4  -4.12902   TAATCAGGTTGAAAA                 CAAG CGC CTTG                 TTGATATTAACGAAG  65 205
AV939_RS19625 4625021 .. 4625054 -  -3.9  -3.23899   CGCTAAGCAATTGAA     TTTATCGATGCGGGTG TTC CACC-GCACCCTTAAA     GTTGCAAGAACGTTA  48 243
AV939_RS19610 4621584 .. 4621597 -  -4.5  -3.59315   TTAATTACTTGTAAA               CCGGT GTTA ACCAG                TTCCATTTGTCTTCA  55 1
AV939_RS19605 NONE
AV939_RS19600 4618082 .. 4618134 - -27.3  -3.06737   TATTAATTTGGAATA CGCCTTACCTCGCCCCAAGGTAAGC CAT GCTTAACTTGAAGCGAGGTAAAGCG AAAACGGTTTGCTCT 100 41
AV939_RS19585 4612432 .. 4612448 - -10.8  -4.78752   ACCACAACGCAAAAA              GCGGCC ATGAA GGCCGC              TTTGTATATCACTAC  91 53
AV939_RS19580 4611652 .. 4611667 -  -8.2  -5.51046   TAAACATACAAAAAA              GCGGCC TATA AGCCGC               TTTCTTTACTAAATA 100 50
AV939_RS19575 NONE
AV939_RS19570 NONE
AV939_RS19565 NONE
AV939_RS19560 4606687 .. 4606718 - -10.9  -2.71364   GCACCGGTTTAATTA      CGCCAAACCCTCG ACCTTA CTAGGGTTTGACG       GCATTTTTTAATCGG  78 44
AV939_RS19550 NONE
AV939_RS19545 NONE
AV939_RS19540 NONE
AV939_RS19535 NONE
AV939_RS19530 NONE
AV939_RS19525 4601767 .. 4601782 -    -9  -2.90813   CACCCGTTGAAACGA              GCGTTG AAGG CAACGC               TATTACCTTCAGTAT  67 171
AV939_RS19515 4598857 .. 4598892 -  -2.4  -3.31792   CGATGACCCTGACAA    CACGCCGC-CTGAATCG TAC CGGTTTGGTGTGGCGTG    CCAAATTCTTATGCC  45 401
AV939_RS19480 4592347 .. 4592359 -  -4.7  -4.28361   GCAAGCCTATTAAAA                GCGCG CTA CCCGC                AACTTAGCATTATAG  64 182
AV939_RS19470 4590723 .. 4590739 -  -5.8  -4.29845   TAACGCAACTTAAAA              GCACCG GGTCA CGATGC              TTTTTGTTGGTAAAC  70 17
AV939_RS19465 NONE
AV939_RS19460 4588999 .. 4589016 - -11.3  -3.54543   AGTCAGCGTTTTAAA             GCCAGCA TGCA TGCTGGC              TTTTTTGTATTTGCA  83 145
AV939_RS19445 4585251 .. 4585274 -  -9.6  -4.73613   CCACTACTAATAAAA          GCCGATACTT TTTA AAGTGTCGGC           TTTTTTAATGCGTAA  90 208
AV939_RS19435 NONE
AV939_RS19430 4582962 .. 4582975 -  -2.4  -3.85567   AACCGCAAACTCAAA               TAGC CAAAGC GCTA                AACCCGATACTCGCT  50 64
AV939_RS19415 NONE
AV939_RS19410 NONE
AV939_RS19405 4577684 .. 4577715 -  -2.4  -5.24129   TGCCTCCAGAAAAAA      TGAGTTCACGC-TAA CTA TTATGCGTGAATTAA      AGCCAGCTAACGTGC  72 57
AV939_RS19400 4577293 .. 4577311 -  -8.8  -2.80589   TCCTAAAGAAAGGTA             GCCGGG TCACTCG CCCGGC             TTTTTTTGGTCTTCA  68 137
AV939_RS19390 NONE
AV939_RS19385 4572333 .. 4572367 - -10.9  -3.63744   GCCTTTTTCAAAAGA    GCCGGG--GCTTTACCT TTA AAGTAAAGCAGCCCGGC    TTTTTTGTGCCTACC  83 100
AV939_RS19365 NONE
AV939_RS19360 4568790 .. 4568802 -  -4.1  -2.92928   AAAGTATAAACATTA                TGAGC GAA ACTCA                ATAGAAGCCCGATAA  47 154
AV939_RS19355 NONE
AV939_RS19350 4566011 .. 4566042 -  -4.5  -3.38782   GATTAAATTACAATA     GTCGCCAG-CAAGTT ACAT AACCCGTCTGGCG-C      ATAACCAATCTGTCA  53 80
AV939_RS19285 NONE
AV939_RS19280 4553038 .. 4553052 -  -3.6  -5.41746   AACTTTCTAAAAAAA               CGTAAT AAA ATTACA               TTTTTATTTGGAGGA  79 151
AV939_RS19275 4551228 .. 4551247 - -12.1  -5.06451   TAGGAGGCGAAAAAA            GCCCGCG GCTAAG CGCGGGC             AAAACATCAATCACG 100 118
AV939_RS19270 4549721 .. 4549738 -  -8.4  -3.92522   GCGCAAGGCGACAAA             GCCCGA AGTACA TCGGGC              TCTGGTTTAGGTTTA  76 136
AV939_RS19235 4537921 .. 4537955 -   -10  -2.77519   AAGACGGAAAATTTA     GCGAACACGATAAAGG GCA CATTGAACGTGTTCGC     GATTTGTTAGACCTA  71 147
AV939_RS19225 4536199 .. 4536226 - -21.4  -3.75832   AAAAGTATATTTAAA        CGCCGCCTAAGC GAAT GCTTAGGCGGCG         TTTTTGTTTGTATCA 100 49
AV939_RS19190 4528134 .. 4528148 -  -2.1  -3.57639   TAACAGTTAGAAATA              CGAGCC TTGG GGCT-G               TGATTTAGGGGCATG  48 119
AV939_RS19185 4526259 .. 4526295 - -13.8   -4.7078   TGAATTATTGAAAAA   GCCCCGGTCTCGC-TCA TGTG TGAAGCGACACCGAGGC    TTTTTTGCCATTAAA 100 59
AV939_RS19165 4522254 .. 4522274 -  -2.6  -3.65224   ACGCCATTTCAATAA           CGCGAGATT GCTC AACCTCG-G            TAAGCCGCCCTTTTG  49 222
AV939_RS19160 4521791 .. 4521814 -  -3.9    -3.727   GGTATTAGATTTAAA          GCAGAAC-AC CCAAC GTAGTCCTGC          TACTTTTATCGACTC  55 232
AV939_RS19120 4513860 .. 4513871 -  -4.4  -2.76261   TTTTAATGCTCAAAG                CTTG CACT CAAG                 GCCAAAAGCACACAT  48 40
       groES NONE
       groEL 4511616 .. 4511640 - -14.4  -4.09117   TTTACGTATAAACAA          GAAACCCTCC GAAAT GGAGGGTTTC          TTTTATATCTAGGTG 100 80
AV939_RS19105 4509300 .. 4509333 - -10.3  -2.56164   TGTGTAAGTAGCAAG     TGGTTGGCTTAGCAT CAAT ACGCTAAGCCGACCG      ATTATAAACACGTAG  76 49
AV939_RS19085 4505998 .. 4506008 -    -4  -3.40743   AAAAACGCTAATTAA                 CATT CTT AATG                 CGTTTTCTCAGCATC  50 383
AV939_RS19075 4503716 .. 4503730 -  -2.9  -3.36195   TAAACAGTAAATAGA               TAATC TCCAT GATTA               CGCTCCTTTGTAGGC  46 23
AV939_RS19070 NONE
AV939_RS19065 4501999 .. 4502028 - -13.7  -2.98223   CACTGAGAGCATAGA       CAGTAGCAGGCAT TTTC ATACCTGCCACTG        ATATTTTATACCTTA  95 38
AV939_RS19060 4501347 .. 4501359 -  -3.4  -3.69216   GCGCTACGTAAAATA                TCGA TTGTC TCGA                CTAATTTTGTTTATC  51 26
AV939_RS19055 4499260 .. 4499301 -  -5.9  -3.57239   AGCTAAAGATTAGAA TGACGCTTAAAACCCAT TTTCTATT ACGGGTTAAAAGCGCCA  TCATGCGTAAGGTTT  62 58
AV939_RS19045 NONE
AV939_RS19040 NONE
AV939_RS19035 4494710 .. 4494723 -  -5.2  -2.60496   TGCTGCCTCAAACAG               GGCC GCACGA GGCC                TTCGATACTGCACAA  48 387
        glmU 4491892 .. 4491909 -  -9.9  -5.28176   GGCAGGCACAAAAAA             GGACAAC CTTG GTTGTCC              TTTCATTTAGCACTA 100 68
AV939_RS19020 NONE
AV939_RS19015 NONE
AV939_RS19010 4487875 .. 4487894 -  -4.9  -3.15236   TAAATCCACACCTAA            CGCACAC GTTTTA GTGGGCG             GTTTAGGGATGGGAT  52 518
AV939_RS18995 NONE
AV939_RS18990 4484880 .. 4484899 -  -8.6  -3.31263   ATTTGACGTGTAGAA            TGGCAGTA TAAA CACTGCCA             TTCTTGTTTTTGCTA  72 74
AV939_RS18980 NONE
AV939_RS18975 NONE
AV939_RS18970 4479783 .. 4479800 -  -5.5  -4.11404   CGTATACGACATAAA             GGCTTAC CATG GTCAGCC              CGATGACTTTCGTGC  65 161
AV939_RS18950 NONE
AV939_RS18945 NONE
AV939_RS18940 4474581 .. 4474611 - -17.2  -3.77241   AAACGCCAATTCAAA       TAAATAAGCCTGTT AGA AACAGGCTTATTTA       TTGTTACTCAGGTTT 100 60
AV939_RS18930 NONE
AV939_RS18925 4470626 .. 4470637 -    -3  -2.78018   ATCTTTCAGTAAGTA                TAGA CGCT TCTA                 TAAGGCTAGCTTAAG  42 23
AV939_RS18920 4469506 .. 4469531 -  -7.6  -2.73364   TTTTTACGCTAACTA         TCGACGCTGA TTTAAC TTAGCGTCGA          TAGTAAATAAGTACC  62 11
AV939_RS18910 4466781 .. 4466799 - -13.2  -5.71983   TGAAGCATAAAAAAA             GGGCATCA TGA TGATGCCC             TTTTTCTTGTCAAAC 100 45
AV939_RS18900 4464380 .. 4464416 -  -8.9  -5.28176   GCTATCGAGAAAAAA   GCGAGGCAAACGCTAC AACTTA ATAG-ATTTGCCTCGC    TTTTTGTAGGTTGGG 100 100
AV939_RS18890 4461404 .. 4461429 -  -6.2  -5.91981   AAAAGGCAAAAAAAA         CGGTAACCGTG AAATA CACG-CTACCG         CTTTTTATACCAGAG 100 57
AV939_RS18885 4459852 .. 4459867 - -11.8  -4.67968   TTAATAAATAACAAA              GCCCGC TGAT GCGGGC               TTTTTACGTTAATAG 100 81
AV939_RS18870 NONE
AV939_RS18865 4457405 .. 4457448 - -14.7   -2.6704   GAAATTCGAAATGTA GTAGGCCATCGCGCCCTCAA TGCTG TTGAGGGCGCGATGGTA-AC GCGGAGCTATTGCAA 100 102
AV939_RS18860 NONE
AV939_RS18855 4456096 .. 4456107 -    -3  -4.19624   TAGCTTCAACAGAAA                GTTT GTAT AAAC                 AGTTTGAACACTACA  58 297
AV939_RS18845 4454806 .. 4454818 -  -3.4  -3.02144   CGACGTCGCTGAAGA                CCTA TACTT TAGG                CTAAAGTAGGTTAAA  45 36
AV939_RS18840 4453924 .. 4453944 - -16.9  -5.38054   TTTCACAAACAAAAA            CACCCCGCT TTA AGCGGGGTG            TTTTATTCAATTCAT 100 82
AV939_RS18835 4453056 .. 4453079 -  -8.1  -3.93556   ACGCATGGAATTAAA          GGTGGGGCT GGGAAT AGCGCCACC           CTCCTACTTTTATAA  77 113
AV939_RS18830 4451876 .. 4451891 -  -4.6  -2.92613   TGCGAGCTCAAATCA              GGCCCA AGCG TTGGCC               ACATTACGCGACCAA  48 130
AV939_RS18820 NONE
AV939_RS18815 NONE
AV939_RS18810 4448409 .. 4448422 -  -9.5  -4.90381   TGCAATACAAGAAAA               GCCCC ATTT GGGGC                TTTTTTTATGTATAA  91 86
AV939_RS18795 4446303 .. 4446318 -  -4.8  -3.59979   GTTGTTTATCGGAAA              GTTAAA TACG TTTAAC               ACCAACACGGATGTT  57 232
AV939_RS18785 NONE
AV939_RS18780 NONE
AV939_RS18775 4440760 .. 4440775 -  -6.2  -3.18199   CAAGGCGTAACGCAA              GAAGAT GCTT ATCTTC               CAGCAATACTGCCTG  57 148
AV939_RS18760 NONE
AV939_RS18755 NONE
AV939_RS18750 NONE
AV939_RS18745 4437439 .. 4437452 -  -2.4   -3.7108   AGTGTTATAGTCAAA               GCTA TAAGCT TAGC                TCAACCCTAGTTCTT  50 21
AV939_RS18740 4436734 .. 4436769 -   -12  -2.93109   CACAAAAGTACGAGA    TAGTTGCGCCTTAATA TTCT CAACAAGGCGCAACTA     ATAATCGTGAACTTA  87 38
AV939_RS18735 4435177 .. 4435203 -  -8.8  -3.35015   GCAACTAGCCCAGAA         GCTTTCTACAAC GCA GTTGTAGCAAAC         ATCTAGTTGAATGGG  72 125
AV939_RS18720 4431814 .. 4431845 - -11.7  -4.16767   AATAACAAGCATAAA      GAGAAAAAGGCGC GAGCAT GTGCCTTTTTCTC       TCACCCGGCGAATTC  90 69
AV939_RS18700 4426944 .. 4426977 -  -4.5  -4.87273   AACAGGGGATAAAAA     GATACAACGGATGGC GATA GAGACCCGTTGCACC      TTCTTAAAATAAAAG  73 41
AV939_RS18695 NONE
AV939_RS18690 NONE
AV939_RS18685 4423609 .. 4423641 -  -7.8  -2.90496   TGGCGGGTCAAATCA      GGCAACGAGC ATTAAAAGCGTTA GCTCGTTGCC      ATTTGCGTTTTAACT  64 61
AV939_RS18680 NONE
AV939_RS18675 4419828 .. 4419840 -  -3.3  -3.11999   ACGAAAGCTATGTAA                CCACC TAC AGCGG                CGATAACTTCCGTTA  45 209
AV939_RS18665 4415578 .. 4415614 - -18.2  -5.28778   ACTAGCTAGAAAAAA    TAAAAGCGGCGTAGAG TTAAC CTCTACGCCGCTTTTT    TGTAACTGCTTTTTC 100 83
AV939_RS18635 4403187 .. 4403202 - -11.8  -3.29958   TCAATAATACTAACA              GGCGGC CTTG GCCGCC               TTTTTTATTTAATAT  84 30
AV939_RS18615 4397474 .. 4397494 -  -6.9  -3.18383   ACGGCCATGCACTAA            GCTAGCA GAGGGAT TGCTAGC            GCTAATTTAATCAAG  62 32
AV939_RS18610 NONE
AV939_RS18605 4395184 .. 4395195 -  -5.8   -3.5861   AGTCATAACAATTAA                CGCT CAGC AGCG                 ACAAGAGCAACTAAT  62 10
AV939_RS18600 4394061 .. 4394073 -  -4.8  -2.89881   GATTTATTTGAGATA                GGCA CGCAT TGCC                TCCTTTACGAGTGCA  51 125
AV939_RS18595 NONE
AV939_RS18590 4392262 .. 4392279 - -12.7  -4.96106   TACAAACATCAAAAA             CGGGAGC TTAC GCTCCCG              TTTTTTTATATTTAT 100 75
AV939_RS18575 NONE
AV939_RS18570 NONE
AV939_RS18565 NONE
AV939_RS18560 NONE
AV939_RS18555 NONE
AV939_RS18550 4380817 .. 4380844 - -12.1  -3.33525   TTTATTCACAGAAGA        CAACCCAGCGA CGTATT TCACTGGGTTG         ATATAAAGGTAGGGT  89 93
AV939_RS18545 NONE
AV939_RS18540 4377727 .. 4377744 -  -5.5  -3.26813   ACCATATAGCATTAA             CAGTGCA TACG TGCGCTG              TGTATATCCTTGCTT  56 54
AV939_RS18535 4376684 .. 4376720 -  -4.6   -5.5208   GCATAACAGAAAAAA   GCGTAACTTC-ACCA TTCGTCGT TGGTTGAAGTTACTC    GAATTTCCTGGTGGT  84 20
AV939_RS18530 4375548 .. 4375567 -    -5  -4.51378   AGGTATATGAGAAAA            CAAGTTAG CTCA CTATCTTG             TCTAATAGCAGCATT  67 10
AV939_RS18525 4373986 .. 4374009 -  -3.8  -5.16841   TTATACGAATAAAAA          GATTACGCCAG TGG CAGGCGTA-CC          TTAATTGTGGTGCCC  73 4
AV939_RS18520 4372245 .. 4372273 -  -7.6  -5.07053   AAGCACGCTAAAAAA       TAAACAGCACAGA TTAT CCTGTGC-GTTTA        TCCGTGTTAAAACGA  89 10
AV939_RS18510 4370337 .. 4370357 -  -7.6  -4.64766   CGTAGACGTTAAAAA            GGCTAAGC GCGAG GCTTAACC            TTCATGCTTACAATG  83 33
AV939_RS18505 NONE
        rpsR NONE
        rplI 4368969 .. 4368984 - -10.4  -5.76633   GCAGACATAAAAAAA              CCGCTC ATAA GAGCGG               TTTTTCGTATACGTC 100 46
AV939_RS18490 NONE
AV939_RS18485 4363988 .. 4364001 -  -2.4  -4.10161   TAGTATTGGGGAAAA               CATC AGCGTG GATG                GTATGGACGATGCCA  55 387
AV939_RS18475 NONE
AV939_RS18470 NONE
AV939_RS18465 4361335 .. 4361345 -  -6.8  -2.63357   AATTATGCGAAATAT                 GGTG TAG CACC                 GTGTAGCAATCGAGC  56 154
AV939_RS18460 4360614 .. 4360632 -  -5.4  -2.77856   AGATCATAAATGAAG             GTTAACAA AAA TTATTAAC             GGCTAATATGCCCCT  52 104
AV939_RS18455 4359036 .. 4359066 - -14.9  -2.87211   AGCTTCCCTCAGACA       CAAAAAAGGCGCC TAATT GGCGCCTTTTTTA       TTGCTCATTTGTGTT 100 95
AV939_RS18425 4354840 .. 4354855 - -10.4  -3.70076   CTAAACTCATTGAAA              CCCTGC TTCG GCAGGG               TTTTTTATTTGTCTT  81 30
        hemE 4353529 .. 4353539 -    -4  -2.95751   CTACGAATATAACTA                 CTTA TGA TAAG                 GCGCACTGAGTTCGT  47 12
AV939_RS18415 4352669 .. 4352679 -  -5.4  -3.64703   CGCCCTTCAGGTAAA                 CCTT GGA AAGG                 TGAGCGATAAAGTGG  59 285
AV939_RS18405 4350125 .. 4350154 -    -5  -4.59376   ATGACTAAACTAAAA       GGCTGATATTGGC ATTAA GCCTACA-CAGCC       CATGCCAATAGATTT  70 39
AV939_RS18400 NONE
AV939_RS18395 NONE
AV939_RS18390 NONE
AV939_RS18385 4345392 .. 4345410 -  -3.1  -2.66733   GTCTAATGTATACCA             CACTCAA CTTAT TAGAGTG             TGACTTTCGCTGTAA  43 18
AV939_RS18380 NONE
AV939_RS18375 NONE
AV939_RS18370 NONE
AV939_RS18365 4341613 .. 4341630 - -11.3  -5.28778   AGCAGGCACAAAAAA             GCCAGTC TAAA GACTGGC              TTTTTAACAAAAAAC 100 52
AV939_RS18360 4339728 .. 4339743 -  -8.2   -5.1675   TTAGCGATTAAAAAA              GGCGGC CTTA GCCACC               TTTTTAGTCTTAATA  91 52
        hemH NONE
AV939_RS18350 4338042 .. 4338059 -  -2.7  -2.54192   TAGATTACGATTAAT             GTGGTTT TGTG AAACTAC              CAAACAACACCTAAA  41 50
AV939_RS18345 NONE
AV939_RS18340 4334760 .. 4334787 -   -15  -5.58454   GGCAGATTAAAAAAA        GCGGGTGACTTCT GTT AGAAG-CACCCGC        TTTATTGTGGTTGAT 100 110
AV939_RS18330 4333176 .. 4333194 -  -5.4  -4.56597   GGTTTTCGCGAAAAA             TAAAATGT AAA ACACTTTA             GATTCAGCCGACTAG  72 245
AV939_RS18325 NONE
AV939_RS18320 NONE
AV939_RS18315 NONE
AV939_RS18310 4329436 .. 4329453 -  -4.1   -2.5937   ACACACTCGCACAAT             GCCCATA TTCC TATTGGC              GTTTATGCTAATAGT  44 255
AV939_RS18295 4325869 .. 4325888 -   -10  -5.55769   CGCGACAATAAAAAA            GCAAGGCA TACT CGCCTTGC             TTTTTGAATTATGTA 100 82
AV939_RS18275 4319280 .. 4319292 -  -3.3  -2.58236   CAAAGCTACATCAAC                TGCAC CCA GGGCA                AATTGCTATTGCGCT  43 238
AV939_RS18270 4317693 .. 4317704 -    -3  -3.72027   ATTTTTGAGGAATAA                TAAC ATGG GTTA                 GATATAGCCTATCTA  51 47
AV939_RS18265 4316502 .. 4316524 - -13.6  -4.20148   ACTATTTTAAAATAA           TGGACTCTAA CAG TTAGAGTCCA           TTTATTAAACTTTGT 100 95
AV939_RS18260 4315377 .. 4315395 - -14.6  -5.29782   TAGATTCATAAAAAA             CGGGCAAC TTT GTTGCCCG             TTTTTTATTGCGCTC 100 62
AV939_RS18245 NONE
AV939_RS18240 NONE
AV939_RS18235 4311217 .. 4311247 - -11.3  -3.68619   CTCAAGTCACTCAAA       TAGCGCTTCGCTT AGTAA AAACAAAGCGCTA       TGAAAAGCAAATTAC  83 54
        folE 4310116 .. 4310130 -   -10  -6.09196   TTCAAAATAAAAAAA               CCGCTT CAA AAGCGG               TTTTTAGTGTTTGCC 100 67
AV939_RS18205 4305261 .. 4305277 -  -2.3  -3.30635   CAAATGTCCCTACAA              TATTTTG CCG CAAAGTA              TACCACAATTCGGCT  45 75
AV939_RS18200 NONE
AV939_RS18195 NONE
AV939_RS18190 NONE
AV939_RS18185 4301529 .. 4301548 -  -7.8  -2.81702   TAATATCATTAACGA            GGCGGCAA TTCA TTGTCGCC             TTTTTTTATATCTGC  62 167
AV939_RS18175 NONE
AV939_RS18170 4296402 .. 4296413 -  -5.8  -2.85354   CATTTCAATGGAAAG                TGCG GTAT CGCA                 AGGGAGGGACGCGTA  54 157
AV939_RS18165 NONE
AV939_RS18160 NONE
        nusG 4295232 .. 4295245 -  -8.1  -5.76633   TCAGACATAAAAAAA               GACGG TAAC CCGTC                TTTTTTCTATGGTAA 100 51
AV939_RS18150 NONE
AV939_RS18145 4293105 .. 4293118 -  -5.9    -4.128   ACCTTTACAGAGAAA               CCGAG TTGC CCCGG                CAGGCTATTAAAGAC  68 33
AV939_RS18140 4292299 .. 4292314 -  -3.2  -4.66953   TCAATATGCCAAAAA              CGGGAA TTAC TTCTCG               TCTTTGATCGCCGCC  64 16
        rplL 4291810 .. 4291836 - -19.6  -4.64766   TGTACAGCGCAAAAA         GGCTGGTGGTTT AAA AAACCACCAGCC         TTGCCGTCTCAGGCA 100 60
        rpoB 4287470 .. 4287487 - -14.1  -3.30243   AGTCAGTCTCTAGAA             CCCGGCG CAAG CGCCGGG              CCATCTCTTGTCATA 100 58
AV939_RS18125 4282995 .. 4283013 - -11.8   -5.1286   TAAAAACTACAAAAA             CCCAATCA CTC TGATTGGG             TCCATTAAAGCGACT 100 284
AV939_RS18120 NONE
AV939_RS18115 4282039 .. 4282063 -  -2.1  -2.64616   CTCTCAGTTATATTA          CGTTTATTACC AAC GGTAATGAGCA          AACGCTTTGTTTGCT  40 7
        fusA 4279872 .. 4279895 -  -8.1  -4.27316   TTTCCTAAGTTAAAA          GTCCGACCC AATACG GGACCGGAC           CGAACCTTCATTTAG  82 42
AV939_RS18105 4279400 .. 4279417 - -12.7   -5.4492   TACAGACACAAAAAA             GGCGCTC CAAT GAGCGCC              TTTTTCTTAATGCTT 100 100
AV939_RS18095 NONE
AV939_RS18090 NONE
AV939_RS18085 NONE
AV939_RS18080 4275003 .. 4275017 -  -4.2  -3.01924   TAGTTCGTGGCAATA               GCTCGT AGC ACTAGC               TCTTAGCGCGAGTTC  49 178
AV939_RS18075 NONE
AV939_RS18070 4272319 .. 4272329 -  -6.8    -3.767   GATGTACTCACTAAA                 GCCA ATA TGGC                 GGCCCTAATTACTTG  66 141
AV939_RS18055 4267971 .. 4267997 - -16.8  -3.05816   CTAGCGCTCACCCAA         CTAAAGATAGCG GCT CGCTATCTTTAG         TGCTGTGGCTATTCC 100 34
AV939_RS18050 4266437 .. 4266461 - -10.2  -4.88067   ATTTACTCATAAAAA          TAGGAATACA TATAC TGTATTCCTA          TTAATTTTTACCTTT  93 44
AV939_RS18045 4264804 .. 4264818 -  -7.8  -3.22618   CCCTGACAGAATATA               CGCATG GCG CACGCG               ATTTCACGCGTTAAC  64 438
AV939_RS18010 NONE
AV939_RS18005 NONE
AV939_RS18000 4253383 .. 4253410 - -10.6  -2.58861   GATTACGTCGACAAT        TTGCTCGCACTT TGCA AAGCGCGAGCGA         TTAGTGTGGTAGCAG  74 175
AV939_RS17990 4250793 .. 4250814 - -11.5  -5.49234   ATACCCAATAAAAAA           GCCCTCGCA TTCA TGCGGGGGC            TCTTAATGTAAAGCG 100 125
AV939_RS17950 4243165 .. 4243195 - -12.7  -3.39856   GATAGACTGAATTAA      GTGATGTCGCCACC TTAG AGTGGCGACATC-C       GTTTATGACTTATTT  95 35
AV939_RS17940 NONE
AV939_RS17935 4241343 .. 4241356 -  -5.2  -5.22137   AATTATAAAAGAAAA               GCGC ACATCG GCGC                TTTGCTATTATTTGA  82 106
AV939_RS17925 NONE
AV939_RS17920 NONE
AV939_RS17915 4237105 .. 4237120 -  -3.2   -3.9122   GATGTGCTTAAACAA              CTCCCG CTAT CAGAAG               AAATAAATGACGCCA  55 280
AV939_RS17900 4233224 .. 4233237 -  -9.5  -5.77988   ACACATACAAAAAAA               GCGCC AGTG GGCGC                TTTTTTCAATTATAT 100 73
AV939_RS17880 NONE
AV939_RS17875 4229682 .. 4229705 - -15.4  -5.85737   AGAGGAATAAAAAAA          GGCGTTGTAG GAAA CTACAACGCC           TTTTTAGTATCGTAT 100 106
AV939_RS17860 4227247 .. 4227264 -  -9.9  -5.70829   AAGATTATAAAAAAA             CGGCAAT TTTC ATTGCCG              TTTTTTTAATCTTCT 100 31
AV939_RS17850 4225186 .. 4225199 -  -9.5  -5.40072   GTTTCTTTAAAAAAA               GCGCC TATC GGCGC                TTTTTTTGTGTCTGC 100 89
AV939_RS17840 NONE
AV939_RS17835 4221711 .. 4221727 -  -3.8  -2.58544   TGCTACCTTGATAAT              CTTATA CGATT TATAAG              TTCCAGAACCAGATT  45 19
AV939_RS17830 4220912 .. 4220941 -  -5.1  -3.38768   CGATAGCAGGCACAA       GTCGCTGTTTA TTTTTAGT TAAACAGCCAC        TTAGTAATCGAGTAC  56 26
        hslU 4219486 .. 4219509 -   -14  -5.75478   AACCACATAAAAAAA          GAGCGCATTT AAAT AAATGCGCTC           TTTTGTGTTACTAGC 100 50
AV939_RS17795 4212441 .. 4212468 -   -12  -2.91264   TGGTGGAGCGATAGA        CCTTCCACCGCA TGGA TGCGGTGGCAGA         GCGCCCATGGATGGG  87 89
AV939_RS17785 4205851 .. 4205877 -  -9.5  -3.26717   ACTTATAGAATGTAA         GGCGATATTCA TTTGT TGATTATCGCC         TTTCTTTTACATCCT  75 32
AV939_RS17755 NONE
AV939_RS17750 4196600 .. 4196625 -  -3.3  -3.14132   TGTCGCGCCCAGCAA         CAGTATTTACC TTAC GCAAAATACTG          GTTTGTGCCCCAACT  46 11
        ubiE NONE
AV939_RS17740 NONE
        ubiB 4193372 .. 4193388 -  -9.5  -3.27408   GTCTATTCAAAGACA              TTTGGCT TAA AGCCAAA              GCAACTATAACACTC  75 115
AV939_RS17730 4192953 .. 4192974 - -15.9  -5.59962   TAAAAGAAAGAAAAA           CGGCGGTCT TTAC AGACCGCCG            TTTTTGAATTTCTTA 100 38
AV939_RS17725 4192030 .. 4192059 -  -9.3  -3.41936   GACTAACGTCAAATA       GCGGCCAATAACC ACGT GGCTATTGGCAAC        CTACAAAGGTTGCCA  77 49
AV939_RS17715 4190325 .. 4190336 -    -3  -3.01247   GGGAAAAAAATTAAC                GTAA AGTA TTAC                 TGTAGACACTTTGAA  43 159
AV939_RS17710 4188671 .. 4188694 - -14.6  -2.54459   AACAGCATTAGTAAC          GAAGGGCCCC TAAC AGGGCCCTTC           TTGCATTAGCCTATT  95 31
AV939_RS17690 4183515 .. 4183525 -  -5.4  -4.24364   CAAAGATATAAATAA                 CGAT GGT ATCG                 CTGACTATATTGGTG  67 365
AV939_RS17665 4178232 .. 4178249 -  -2.7  -3.53343   AATCGTGCTTCTAAA             GCGTTTA GGCA TAAAGGC              AGGGAAACAAATAAC  47 194
AV939_RS17660 4177129 .. 4177143 -  -4.3  -2.59458   AAGCAGATGAATCTA               GTCTT GTTAT AAGAC               GAAATGATGAAGCGA  47 379
AV939_RS17655 4174636 .. 4174664 -    -9  -5.83211   CATTAAAACAAAAAA       TCCCGTTATCGCT CAAA AACGA-AACGGGA        TTTTTTTAGCACTAA 100 47
AV939_RS17645 NONE
AV939_RS17640 4169545 .. 4169568 - -13.2  -5.04601   TTTAGAAACGAAAAA          GCCGCTAACG AATA CGTTAACGGC           TTCAGTGTTTTGCGA 100 101
AV939_RS17635 4167365 .. 4167396 - -13.9  -5.36441   TTTCTATACAAAAAA      GCCCCTATT-CCTG CTCAT CAGGTAATAGGGGC      GAGCATTATATTTGT 100 52
AV939_RS17630 4165714 .. 4165737 -  -6.1  -5.24449   CATAAAGGCAAAAAA          GACCATTAC AGGAAA GTAATAGTC           TTTTTAAAGGTAACT  84 102
AV939_RS17625 4163545 .. 4163563 - -13.8  -5.68489   CACAACAATAAAAAA             GCCCCAGC ATA GCCGGGGC             TGATAACCAAATGTT 100 46
AV939_RS17620 NONE
        rplX NONE
AV939_RS17610 NONE
        rpsN NONE
AV939_RS17600 NONE
AV939_RS17595 NONE
AV939_RS17590 4160356 .. 4160366 -  -3.2  -3.35774   TATAAACTCCTAGAA                 CTGA AGG CCAG                 CTTCGCGAGCTGCAT  48 9
AV939_RS17585 4159851 .. 4159865 -  -2.8  -4.15565   CTGATTACCCCAAAA               TTTCTG ATA CAGACA               ATCCACGCTTCGCAG  55 0
AV939_RS17580 NONE
AV939_RS17575 NONE
        secY 4157642 .. 4157658 -  -6.7  -3.74178   CAACTAAATTGCAAA              TATTTAG GTT CTAAATA              CTTTAAACAAAACCA  67 258
AV939_RS17565 NONE
AV939_RS17560 NONE
AV939_RS17555 NONE
AV939_RS17550 NONE
        rplQ 4154642 .. 4154671 - -15.9  -4.11751   ATTAATTCTCTAAAA       CAAAAAACCCGGC CTAA GCCGGGTTTTTTA        ATAATTCTGATAACT 100 59
        cpsB 4153030 .. 4153042 -  -4.1  -3.34609   CTATTGAAAGTAATA                TCGCT ATT AACGA                AAACATTCTTATCAA  49 72
AV939_RS17535 4151505 .. 4151519 -  -2.9  -4.26903   TGCAGCCGACCAAAA               TTAAG ATTTA CTTAA               TTATCAATCGACTAT  58 55
AV939_RS17530 NONE
AV939_RS17525 NONE
AV939_RS17520 4145280 .. 4145296 -  -3.7  -3.70742   AAAACTTTAACATAA              CTTTAGA TTC TCTATAG              TTTTTCAATCATGCA  53 75
AV939_RS17515 NONE
AV939_RS17510 4143231 .. 4143241 -  -5.4  -3.67737   TAGAAAAGTGTTAAA                 GGTT AAC AACC                 GGATGTCATTGCAGG  59 165
AV939_RS17505 NONE
AV939_RS17500 NONE
AV939_RS17495 4138018 .. 4138069 -  -3.6  -2.80522   AGGCTATCGAACAAG TTGCTTCGCCTAATTTGCTGCTCC ATTC GGAGCAGCCTTATAAACGAGACAA TTGATTTAGATATGA  45 31
AV939_RS17490 NONE
AV939_RS17485 4133213 .. 4133225 -  -3.5   -3.5032   GGCCTATATGAAATA                TAAAT TCC ATTTA                ATTGGAGGATTCCTG  49 23
AV939_RS17480 NONE
AV939_RS17475 NONE
AV939_RS17470 NONE
AV939_RS17465 NONE
AV939_RS17460 4127836 .. 4127859 -  -8.1  -4.59853   TTAAGTTGGCAAAAA          GCCGCTTAG AGCTAA CGAAGCGGC           TTTTCAATTGTAACA  86 59
AV939_RS17455 NONE
AV939_RS17450 4124813 .. 4124828 -    -9  -5.95539   TTGGAAATAAAAAAA              CCAGCT TAGC AGCTGG               TTTTTTTCGAGTTCG 100 55
AV939_RS17445 4122211 .. 4122228 - -12.7  -6.09196   TTGAAAACAAAAAAA             GCCGAGC ATGT GCTCGGC              TTAAGTTATAGTCCA 100 56
AV939_RS17435 NONE
AV939_RS17430 NONE
AV939_RS17425 4116645 .. 4116655 -  -5.4  -2.84325   CCCTTCGAAACAGTA                 GGTT ATG AACC                 CTTTTGTTTCAACCC  51 364
AV939_RS17410 4112307 .. 4112342 - -17.2  -4.41616   ATGCTTTCAAAGAAA    GCACTTAAGTTTGATT TCAC AATCAAACTTAAGCGC     TCTAAGGCACATCTT 100 105
AV939_RS17405 4108811 .. 4108821 -    -4  -3.09015   CTGATATTCACGTAA                 TCAA TCT TTGA                 GCACTGAGTACTACT  48 89
         rrf 4108528 .. 4108549 - -14.5  -5.73339   ACAAGCATAAAAAAA           GGGCTATCC GTTA GGATAGCCC            TTTCTTCGAATGGGA 100 74
AV939_RS17395 NONE
AV939_RS17390 4104657 .. 4104676 -  -7.2  -4.42238   TGATGTTAATTAAAA            GCGGTTTAG GGG CTA-ACCGC            TACCTTGTCATATTA  78 50
AV939_RS17385 4103616 .. 4103629 -  -2.4  -3.23274   TGTCTCATAAGCTAA               TGAG CCCTTT CTCA                CCTACCAAGCGTACT  45 1
AV939_RS17380 NONE
AV939_RS17375 NONE
AV939_RS17370 NONE
AV939_RS17365 NONE
AV939_RS17360 NONE
AV939_RS17355 NONE
AV939_RS17350 NONE
AV939_RS17345 4099555 .. 4099592 - -17.3  -3.76107   AGGTAAAAAGCAGAA   GGGCAATGTACTTCACA TAAG TATGAAGTACATTACCC    ATGATGACTTACTTA 100 54
AV939_RS17340 4097415 .. 4097454 - -12.5  -3.63569   TGAAGTCTTTAATAA CTAT-AACT-GCCCTACCT AAAT AGGTAGGGCGAGTTGATAG  TGGGTATTACTTATT  95 36
AV939_RS17335 4096699 .. 4096712 -  -9.5  -4.74103   GTGTTAATGGAAAAA               GGGGC GAAC GCCCC                ATTTCTATCATTGAT  90 59
AV939_RS17330 NONE
AV939_RS17325 NONE
AV939_RS17320 4092939 .. 4092969 -  -9.8  -3.10939   AACTTTAAAACGACA       TAAGGCAGGTGC AAAGTAA GTACCTGCCTTA       GCTTACTGCTGTAAC  76 55
AV939_RS17305 NONE
AV939_RS17300 4086534 .. 4086547 -  -2.3  -4.19238   TGGTGAATTTCAAAA               GACCC TAAA GGCTC                AGCCGGTTTATCAAG  57 188
AV939_RS17275 4082433 .. 4082455 -    -7  -2.92613   CGCTACTTCAAAGTA           TGACTCGCCA CAT TCACGAGTCA           CATTATAGCGATAGC  61 43
AV939_RS17265 NONE
AV939_RS17260 4076735 .. 4076753 -  -8.1  -3.08812   GTTGGTTTAACAAAG             GCTCGGC CAATT ACCGAGC             GTCAGTGTCTTGTTT  68 61
AV939_RS17255 NONE
AV939_RS17250 4074126 .. 4074136 -  -5.4  -2.95909   AAAGATATATTAAAG                 CCTA GTT TAGG                 GTAGTTTATTAAGTT  53 34
AV939_RS17230 4070492 .. 4070509 - -11.3  -5.93809   TCTCTATAAAAAAAA             GCCACGT TAAA ACGTGGC              TTTTTTGTTGGTCCG 100 120
AV939_RS17200 4062090 .. 4062116 - -10.3  -6.12328   ACAAGATAAAAAAAA        TGCCAC-TTCCA AAAT TGGAAAGTGGCA         TTTAACACTACAACT 100 58
AV939_RS17195 4061126 .. 4061183 - -10.1  -5.00642   TAACTCACACAAAAA CGCCGCTTGTACAATGGCCTATCTC TCGTACATTT GAGATAGGACATAGT-C-AGCGGCG TTTCATTATTTCTTC  93 126
AV939_RS17180 4055988 .. 4056013 - -11.9    -3.109   AAACTCGTAACAAAC         TGTCAGCAGCA TGGA TGCTGCTGTCA          AGCCTCCATGGATGG  87 114
AV939_RS17175 4053253 .. 4053269 - -13.7  -5.08601   GCACTGTAAGAAAAA              GCCCGCT TAA AGCGGGC              TTTTTAATGGCATTA 100 57
AV939_RS17165 4049683 .. 4049706 -   -11  -5.20606   AAACATGAATAAAAA          GGTGAGCCCC CACA AGAGCTCACC           TTTTTGTATGAATTA 100 38
AV939_RS17160 4048098 .. 4048115 -  -8.4  -5.04356   GTAAACAACGAAAAA             GCCGTC TGATTC GACGGC              TCTACTCAATATTAG  91 64
AV939_RS17155 NONE
AV939_RS17150 NONE
AV939_RS17145 NONE
AV939_RS17140 NONE
AV939_RS17135 NONE
AV939_RS17130 4041831 .. 4041846 - -11.8  -5.38326   TTAACTAAACAAAAA              GGGGGC TCAC GCCCCC               TTTACTCACTTGTAG 100 49
AV939_RS17125 4040754 .. 4040768 -  -6.4  -3.19226   AATGCTAGAATAAAC               GTAGAC ATA GCCTAC               TCCTTAATTATTTAC  60 29
AV939_RS17120 4040432 .. 4040458 - -17.4  -5.42131   GAAGCATACAAAAAA         GCGCGGTAAGCT TTT AACTTACCGCGC         ATCTATATTTATACA 100 95
AV939_RS17115 NONE
AV939_RS17110 NONE
AV939_RS17105 4037685 .. 4037698 -  -3.7  -4.24342   TCGCCCACCAACAAA               GCTGC TAAA GCGGC                GTCCAATACGATAAA  62 206
AV939_RS17095 4035763 .. 4035782 -  -5.6  -3.27475   CCTTGCATGACAATA            GCGCCCCT TTCA AACGGCGC             TTCATTGCCGCTATT  54 287
AV939_RS17085 NONE
AV939_RS17080 4032523 .. 4032550 -    -4  -4.11585   ATTGAGCATAAACAA        GCTTGGCGCGCT AAGC AACGCGCAATAC         GGCTAATTTATACCT  59 39
AV939_RS17075 4031620 .. 4031649 -  -6.4  -2.76671   ATCAGTTAAAAGCGA       TGCGAGCTCAAC TTGCTT GTTGAGCACTCA        AATCGGGATCGGGGC  57 3
AV939_RS17065 4030029 .. 4030047 - -14.6  -5.14563   CTGCCCATTAAAAAA             GGCGAGTG ATC CACTCGCC             CTTTACTTATTGCGC 100 65
AV939_RS17045 NONE
AV939_RS17040 4022933 .. 4022958 - -19.1   -5.7946   GTTTTAACAAAAAAA         CGGCGGTGCTT TTAA AAGCACCGCCG          TTTTTATTTATACTT 100 98
AV939_RS17030 NONE
AV939_RS17025 4019175 .. 4019187 -  -2.7  -2.94299   CAACATGCCAAACTA                CCTTT GTT AAAAG                CGTAAATAAAATTCG  43 19
AV939_RS17020 4018516 .. 4018537 -  -5.9  -4.74103   CTTGCAAGGTAAAAA           TCTGAGG CCTGATAC CCTCAGA            TGATTCTTTATACCC  77 147
AV939_RS17015 NONE
AV939_RS17010 NONE
AV939_RS17005 NONE
AV939_RS17000 NONE
AV939_RS16995 4009529 .. 4009540 -  -3.6  -3.21793   GATAACGACCAAAAT                GCAG ATTA CCGC                 CACGACGGCACCTAC  46 344
AV939_RS16965 4003046 .. 4003075 - -15.9  -5.31519   ACAGCCAAACAAAAA       TGCGGTTACAGAT TAAA ACCTGTAACCGCA        TTTTTTATTTCTATT 100 131
AV939_RS16955 NONE
AV939_RS16950 4000952 .. 4000981 -  -6.5  -4.03234   TTGGGCTTACAGAAA       GCGGCAA-TTGGCG TAT CACCAAGTTACCAC       TTTACCGTCCCAGTC  69 11
AV939_RS16945 3999257 .. 3999276 - -13.6  -4.07133   TAGGGTTATAAATAA            GGCGCTCA CATT TGAGCGCC             TTGTTATTGATATAC 100 87
AV939_RS16930 3996714 .. 3996743 - -16.7   -2.9348   TTTAAACGCTAGACA       TAAAAAAACCGGC CTAA GCCGGTTTTTTTA        TGGAAATCATTACTT 100 39
AV939_RS16910 3992501 .. 3992514 -  -5.3  -3.88291   TACTACTTTGACAAA               CCAAT GTCG ATTGG                GGACTTTGTAGAAAA  63 126
AV939_RS16885 NONE
AV939_RS16880 3985695 .. 3985710 -    -9  -6.15259   TAAGGCAAAAAAAAA              CGACCT TATC AGGTCG               CTTTTCATAAATAGG 100 58
AV939_RS16875 3984678 .. 3984704 -  -3.7  -3.05844   GGTTGTACGGTAAGA        GCGCGCAGGTAA TGAC CTACCC-CACGC         TCTACGCGATATTTA  48 38
AV939_RS16870 NONE
AV939_RS16865 3983960 .. 3983975 -  -7.5  -4.17516   TTCAAATGACACAAA              GCCGG ACTTAA CCGGC               AATGTATAACTAATT  75 134
AV939_RS16860 NONE
AV939_RS16855 3982128 .. 3982141 -  -8.1  -5.71712   GCTGACACAAAAAAA               CCGAC ACAT GTCGG                TTTTTTTGTTTATCA 100 59
AV939_RS16845 NONE
AV939_RS16840 NONE
AV939_RS16835 3975203 .. 3975213 -  -3.2  -2.58663   AGTGAGCTTTATAAG                 CTCG TAC CAAG                 AAAACAAAACCCAGC  42 202
AV939_RS16825 3971738 .. 3971756 -    -6  -4.33182   CCACCTAGAAAAGAA             TGTGCC CCCACTT GGCACA             ATAGGATGTTAGACG  73 269
AV939_RS16815 3970956 .. 3970972 - -13.7  -5.60993   TTGGGCACAAAAAAA              CCGGCAC CTA GTGCCGG              TTTTTTTAGTGCGAT 100 40
AV939_RS16795 3965314 .. 3965328 -  -5.6  -2.92712   CACCATATAGAAGCA               GGTGTG TTA CTCACC               AAAAAGTAATGCTCT  53 99
AV939_RS16785 3962780 .. 3962796 - -10.1  -5.42514   GCATAAATTAAAAAA              CCTGGGC ATG ACCCAGG              TTTTTTTTACTTTAT 100 37
AV939_RS16775 3960466 .. 3960486 -  -4.7  -4.54297   TTAATAACAAAACAA            TCTGTGTAG GCA CTACACTAA            CAATGTCACCATCGA  70 45
AV939_RS16770 NONE
AV939_RS16765 3960066 .. 3960107 -  -7.5  -5.21709   CCTTAGAGTAAAAAA CCCTAATCAATGCTTACTC ATTC GAGTAAAAATTCATTAGGA  TTCATGGTCCAACAT 100 171
AV939_RS16760 3956512 .. 3956535 -  -2.4   -3.4398   TGCCAAGGCAAAAAC          TTTTGCAAAC GTTA GTTTGCGTAA           TACCGACTTATTTAG  46 168
         rrf 3956318 .. 3956339 - -13.1  -5.76633   TTAGACATAAAAAAA           GCCCTTATC ATAC GATAAGGGC            TTTCTTCGAATGGGA 100 74
AV939_RS16740 3950918 .. 3950930 -  -3.3  -3.44051   TTCTCATCACTATAA                GGTTG AAT CAGCC                GACGAAAAGATAGAG  50 407
AV939_RS16705 3942203 .. 3942232 -  -5.7   -3.1634   CGCTAAACGAGCCAA       GCGGATGGTATGGC AAT GCCATACTTTCC-C       GTTTCAAGGTTCTTG  54 450
AV939_RS16675 3932746 .. 3932761 - -11.8  -5.84381   TTAGCAATAAAAAAA              CGCGGG CATG CCCGCG               TTCTTAATAAGTAAG 100 54
AV939_RS16670 3931787 .. 3931798 -  -7.2   -5.1101   TGATGATGGAAAAAA                CCGC GTTG GCGG                 CGACCTTTTATTAAC  86 143
AV939_RS16660 3929707 .. 3929726 -  -3.4  -3.52652   TTGATTGAAGGAGAA            GCTGCTGC GTTG GCCGCATC             TACGATAAGCGACGA  50 448
AV939_RS16650 NONE
AV939_RS16645 3926864 .. 3926880 - -10.9  -3.45131   TGGAAATAAAAATTA              GGTTACG CAA CGTAACC              GGTCTGCGCTGAAGG  83 494
AV939_RS16640 3925292 .. 3925302 -  -2.6  -3.54414   ACTTCGAAGCAAAGA                 TAAA CGC TTTA                 TTTAGCCTTAACTGT  47 170
AV939_RS16620 3916227 .. 3916244 -  -2.7  -3.75461   TAAATCCCTATTAAA             TTGATAG ACGT CTTTCAA              GTTTGTATTTCGTAT  51 58
AV939_RS16615 NONE
AV939_RS16610 NONE
AV939_RS16605 NONE
AV939_RS16600 3913350 .. 3913366 -  -2.2  -2.66979   CGAATATCAACGAAC              TCGTCA GGTGT TGTCGA              TGGATGCCGGTTGGC  40 308
AV939_RS16595 NONE
AV939_RS16590 NONE
AV939_RS16585 NONE
AV939_RS16580 3909357 .. 3909376 -  -2.8  -4.78149   CTTACAACTTAAAAA            GAGCG-GTG TAG CACTCACCC            TTGAAGCTAACTAGT  65 125
AV939_RS16550 3900525 .. 3900550 - -10.6  -4.95957   TAAACCAAGCAAAAA         TAAAAGCCTC TCAGAG GAGGCTTTTA          TTTAACTATCGGTAA  93 84
AV939_RS16545 NONE
AV939_RS16540 NONE
AV939_RS16535 3895227 .. 3895245 -  -9.6  -2.92157   TATTAATTTCAGATA             GTATCAGC GCG GCTGACAC             CCTTCCGACAATGGT  73 232
AV939_RS16530 NONE
AV939_RS16525 3889130 .. 3889158 - -17.5  -5.86061   TTTCATCAAAAAAAA        TGGCTGCCCGTCA TTA CAACGGGCAGCCA        TTCATTTTGCAGTAA 100 81
AV939_RS16490 3877319 .. 3877330 -    -3  -4.85822   ACCATAAACACAAAA                TAGA CGTG TCTA                 TGCTAACCATTCATC  67 164
AV939_RS16485 NONE
AV939_RS16480 NONE
AV939_RS16475 3873735 .. 3873760 - -11.9  -4.90381   TTCAACATAACAAAA         TAAGGCAGCAC ATAA GTGCTGCCTTC          CCGCTTAATTAAAAG 100 34
AV939_RS16470 NONE
AV939_RS16465 NONE
AV939_RS16460 3867962 .. 3867989 -  -4.2  -5.06414   CTGTTCGAATAAAAA        GCACTTAA-GAGA CCG CCGCTTTAAGTGC        TTGTTTCAAGCGCAG  75 2
AV939_RS16385 3850247 .. 3850265 -  -4.6  -2.85838   AATTAACAGGAAGCA             TGCCCAAA ATA TTTAAGCA             ATTGGAAAAGCTTGA  48 45
AV939_RS16380 3848268 .. 3848291 -  -6.7  -5.88197   TCAAACATAAAAAAA          GCCGATACC TTCGAC AGTACCGGC           CTCAATTGTATTTAT 100 47
AV939_RS16375 3847605 .. 3847627 - -11.3  -5.26316   TTAGCCTATAAAAAA          GCCGGG-CGA TTTC TCGACCCGGC           CGACAAAACGGGAAC 100 45
AV939_RS16370 3845139 .. 3845172 -  -3.9    -3.965   CTTCAAAATTAATAA     TATTGGTGCGTTTAA TACC TTAGGCGCATCAATA      TTCATCACATTCGTC  57 182
AV939_RS16365 3842866 .. 3842896 - -13.4  -2.86676   GGGATGAACTCAAAC       GGTCACATGCTCAA GAT TGGAGCATATGACC       ATTTTTAAAATTTAA  93 477
AV939_RS16360 3841284 .. 3841314 - -13.4  -3.53012   TTGGTTGGTTTGAAA       GCGTCAGCGTTTCA GAT TAAAACGCTGAGGC       TGCAGAACGTTTATT 100 44
AV939_RS16355 3839823 .. 3839851 -  -8.1   -5.1925   TTACAAGTGAAAAAA        GTGGGTAAGTGCA CCT TGCACCTACCCGT        GGTTAATATTTTATT 100 39
AV939_RS16350 NONE
AV939_RS16345 NONE
AV939_RS16340 3837005 .. 3837039 - -15.9  -2.90763   CTTATACCTTACACA     TTGGCGAGTTACTGT TGTTC ACAGTAACTCGCCAG     TAAACCGGTAATGAT 100 40
AV939_RS16335 3836134 .. 3836148 -  -5.7  -2.73676   CCCAAAGCAAATTTA               TGCCT TGCTC AGGCA               CCTTTCAGCACATCA  50 125
AV939_RS16325 NONE
AV939_RS16320 NONE
AV939_RS16315 NONE
AV939_RS16310 NONE
AV939_RS16305 NONE
AV939_RS16300 NONE
AV939_RS16295 NONE
AV939_RS16290 3824067 .. 3824077 -    -4  -3.89215   CCTCACAAATCTAAA                 GATA AAG TATC                 GTTTTTAAATTCAGG  57 2
AV939_RS16285 3822652 .. 3822662 -  -6.8  -3.28712   CGCCGTTTGGGATAA                 CTGG GTA CCAG                 AAGGGCATGCCCCAG  61 257
AV939_RS16270 3819960 .. 3819978 -  -5.9  -2.54387   GAAAGGTTCAAGTTA             GCGCTTG CCGAT CAGGCGC             TCTGTCAAAAGCGCG  53 59
AV939_RS16265 3818647 .. 3818668 -  -9.3  -2.76573   ATCAACAATGATAAG           GGGGGCGCC TTAA AGCGCCGCC            TTCCATGCTTTTTCA  72 13
AV939_RS16260 3816949 .. 3816959 -  -3.2  -3.60627   TTACCCGACCCCAAA                 GTGC AGC ACAC                 TATCGAAATGGTTAC  51 125
AV939_RS16250 3813118 .. 3813134 -  -9.4  -4.39227   ACAAAGAAAATGAAA              GCCGAC GCTAG GTCGGC              TTTTTTTGTAATCGT  86 265
AV939_RS16245 NONE
AV939_RS16240 NONE
AV939_RS16235 NONE
AV939_RS16230 3803203 .. 3803213 -  -6.8  -3.66784   GTAGGCTTAACATAA                 TCCG CTT CGGA                 TCAGACTTATTCGTT  65 6
AV939_RS16225 NONE
AV939_RS16220 NONE
AV939_RS16215 3800500 .. 3800524 - -15.9  -3.96252   AATACAGAAATAGAA          GCAAACTAAGC TTG GCTTAGTTTGC          AACTTAATAAACTAT 100 45
AV939_RS16195 3792108 .. 3792122 -  -7.1  -4.55997   AGAGATAACAACAAA               CCGAC TTTAT GTCGG               TTTTTTTGTGTCTGG  79 48
AV939_RS16120 3774870 .. 3774914 - -24.7  -3.03124   TTCTACCGTTCAATA TTGGATACAAAAAAGGGAAGC TCT GCTTCCCTTTTTTGTATCCAG TGTTTTTTGCTTACC 100 36
AV939_RS16105 3770822 .. 3770840 -  -2.4   -4.4009   GCTCAGTTGATAAAA             CACGAC TTGAGGC ATCGTG             CGTTAGTCCTCTAGC  59 28
AV939_RS16100 NONE
AV939_RS16095 3767492 .. 3767511 -  -8.6  -5.86061   TTTTAGCAAAAAAAA            GAGTTGTC TTTC GACAACCC             TTTTTCAATTCGCTT 100 111
AV939_RS16060 3758168 .. 3758197 -  -2.3  -4.76423   TACAAATACACAAAA      GCCCGCATTATTT TTTCTG AAAT-A-GCGGGC       TTTTTAATGCGCATT  64 75
AV939_RS16035 3751098 .. 3751117 - -12.1  -5.75342   CGTTGGCAAAAAAAA            CGCCGGC TTTAGG GCCGGCG             TTTCTTGAATCATCT 100 84
AV939_RS16025 NONE
AV939_RS16020 3749184 .. 3749209 -  -9.8   -4.7497   TTTAGCCACTAAAAA         GCCCGTTATGC GTTAA GCA-AACGGGC         TTTTTAATATGCTAG  91 103
AV939_RS16010 3746873 .. 3746884 -  -7.2  -3.53224   GATTTGGCGTTTAAA                GCGC TGAT GCGC                 CAACCTGGCTCTAGT  65 148
AV939_RS15990 3743650 .. 3743666 -  -6.5  -4.11216   GCCCTATCGCCAAAA              GCGGCCA TTC TAGCCAC              TGTTTATTCCGCTTT  68 154
        aspA 3740645 .. 3740660 - -10.4  -5.68039   AAACCCATAAAAAAA              GCGTGG AGCG CCACGC               TTTGTAAATCAACAT 100 102
AV939_RS15975 NONE
AV939_RS15970 NONE
AV939_RS15965 3738509 .. 3738543 -  -7.3  -2.76272   AAATAAACGACAGCA    GTTTACCCATGTCTTG TTAC CAAAACATGGGTAG-C     ATTATTTATGGCAAG  60 70
AV939_RS15955 3737075 .. 3737099 -  -8.6   -3.5365   GTAAAGGCGAGACAA          GCATACACCA AGATG CGGTGTACGC          CCGATAATCATTTAC  74 37
AV939_RS15950 3736083 .. 3736100 -  -6.9  -2.89683   ACCTGATGCCAGATA             CCCCCGC GACT ACAGGGG              TATTAGACCAAGCTT  56 339
AV939_RS15940 3734710 .. 3734728 - -11.8  -5.11063   ATCAGTTAATAAAAA             GCAGTCAT TTC ATGACTGC             TTTTTTTATATCTTT 100 69
AV939_RS15925 3730032 .. 3730049 - -11.3  -5.71712   TCTCACATAAAAAAA             TGCCAGC AAAG GCTGGCA              TTTTTTTAAATCATG 100 68
AV939_RS15920 3727374 .. 3727405 -    -6  -3.41878   CTCGCCAATTCACAA      GCCTGCACA-CTT CCCCCTC AAGATGTGCAAGC      GACGCTACTAGCGCT  59 351
AV939_RS15905 3723490 .. 3723507 - -12.7  -5.00138   TACTGAAATTAAAAA             GCCCCGA TAAA TCGGGGC              TTTTTGGTATTTGCG 100 80
AV939_RS15860 3715522 .. 3715545 -  -9.6  -4.52589   CGGTGGCATATAAAA          GCGCCCACACC ACA AGT-TGGGCGC          GTATTTATTTACTGT  86 34
AV939_RS15855 NONE
AV939_RS15850 3713304 .. 3713314 -    -4  -3.12663   ATTATCACTCAAAAG                 GAAA AGA TTTC                 ACATTAAAATTAACC  48 72
AV939_RS15845 3710262 .. 3710277 -  -8.2  -3.87373   TATAGGGTGGATAAA              GCCGGG TTAC CCCAGC               ACAAACAATTAGTAG  77 34
AV939_RS15840 3704000 .. 3704026 - -11.7   -4.2349   TTCTGACATTCAAAA         GCGCCATTATC TTCTC AATAATGGCGC         TTTTCAACTCATCAT  93 52
AV939_RS15815 3694024 .. 3694042 - -11.7  -5.27938   ACTTCTAAATAAAAA             CGGGGCT TAACC AGCCCCG             TTTTTTGTTAAACGA 100 42
AV939_RS15810 NONE
AV939_RS15805 3691682 .. 3691734 - -10.8  -3.03441   TATTACTTTTTAATA CCTTGGATGCAGCGGCGCATCGCT TTTTATC AGCGTTGC-C-GCTACATCCAAGA TTTTCGTTTCGATTC  79 14
AV939_RS15790 3686383 .. 3686412 - -11.5   -5.5112   GTTAGTAATAAAAAA       TGCTGATAGCGCC ATAC GGAACTATCAGCA        ATGGGGAGCGTCAAC 100 46
AV939_RS15785 NONE
AV939_RS15780 3683478 .. 3683523 -  -4.9  -2.50113   TAGCACTTCATTAAC GTAGGAGGGCAAGG-TATAA AACCGAA TTATACCCTTGCCATCACAC AGTTGCAGTTTTAAA  49 36
AV939_RS15775 3682183 .. 3682211 - -10.4   -3.7108   ACCTTGAGACGCAAA        TTGATATAGCCG ACAAA CGGCTTTATCAA        GCTAAGCGTACTGGT  78 95
AV939_RS15740 3670560 .. 3670606 - -15.4  -3.29511   TCGATGCTGCCAGAA TCGCAAAACAAAAAGGCTGGTT ATA AACCAGCCTTTTTGTTTGCCTA TATCCGCTGCATTTA 100 100
AV939_RS15665 3656033 .. 3656049 -  -5.9  -3.45832   TAACGTTATAAGCAA              TAGTACA AAA TGCACTA              AGCCTATTTCGTGTT  60 85
AV939_RS15660 3655658 .. 3655685 - -16.4  -5.04249   TTTGCAAAAAATAAA        TGCCCGC-AGCGT TAA ACGCTAGCGGGCA        TTTTTATTCGTGGCG 100 72
AV939_RS15635 NONE
AV939_RS15630 3649741 .. 3649751 -  -3.2  -3.81948   TAACGCCATAAAATA                 CACC CCT GATG                 GCGGCACAGTGACGC  53 321
AV939_RS15610 3645384 .. 3645412 - -13.3  -3.30737   TAGAAAGATTAAAAG        CAAAAAGGAGCTC ATT GAGCTCCTTTTTT        AATATTCTTTATTTT 100 68
AV939_RS15570 NONE
AV939_RS15565 3638124 .. 3638140 -  -5.2  -3.19656   AAACCTATTCAGGAA              GTCATT GTTGA AATGAC              TGACGGCGGTGTTGA  52 455
AV939_RS15555 3635973 .. 3635995 - -14.8  -5.86061   CGTGAGTAAAAAAAA           GCCCGCTCTC TGT GAGGGCGGGC           TTTCGTTGTCTTATG 100 264
        thrA NONE
AV939_RS15545 NONE
AV939_RS15540 NONE
AV939_RS15535 3630239 .. 3630271 - -15.7    -4.564   AAGCTGAAATTAAAA      GGCCTGAGTCCGATA CAA TATCGAAATCAGGCC      TTGGTTGCCGCTTAG 100 181
AV939_RS15520 3625925 .. 3625941 -  -2.2  -2.71101   GGTGCAAACAACTTA              TGCGTC TTGGC GACGTA              AAAAGACTAACTCAG  40 6
AV939_RS15515 3624734 .. 3624748 -  -4.3  -2.53263   CTTATCTGCAACTTA               GTTGT TCGCG ACAAC               CTTTATACTGGCTTG  47 485
AV939_RS15505 3622711 .. 3622729 -  -3.1  -3.28745   CTCCTAAGAACCTAA             CAGAATG AATTA CATACTG             TAGATAAGTGCGCGA  48 88
AV939_RS15500 3622307 .. 3622332 - -16.3    -5.252   TAGCTTTATAAAAAA         GAAGGGAAGCT AATT AGCTTCCCTTC          TCTATATTTCTTATA 100 47
AV939_RS15465 NONE
AV939_RS15460 NONE
AV939_RS15455 3613417 .. 3613436 -  -7.8  -3.41359   GGTTGAAAATCAATA            CGGCGACT AGCC ACTCGCCG             TTATCTGGACACCCG  68 243
AV939_RS15430 3608788 .. 3608805 - -11.3  -6.19443   TAGAGCAAAAAAAAA             CGCCACA TTAA TGTGGCG              TTTTTGTATCAGAGA 100 49
AV939_RS15420 3605743 .. 3605759 - -15.1  -5.96894   ACTTAAATAAAAAAA              CGGCGCC AAG GGCGCCG              TTCCATTATAGGTTT 100 86
AV939_RS15415 3604311 .. 3604350 -  -2.1  -2.70932   GTTCTGGTGCAATCA  GGTGGCGCTGACAGTAA ACTAGG TTACTGTCAGCTTTAGC   TAAAGGCCTACCGTT  40 33
AV939_RS15410 NONE
AV939_RS15405 3600665 .. 3600678 -  -4.5  -4.06678   AGCTATCGACACAAA               GCCGT AACC ACGAC                TTGCATGCTCAACTA  61 125
AV939_RS15390 3596718 .. 3596741 - -12.6  -5.00467   TCAATAATAACAAAA          TAAGGCCATT AAAT AATGGCCTTA           CACTATTACCGTTAC 100 127
AV939_RS15385 NONE
AV939_RS15380 3594934 .. 3594954 -  -3.8   -4.0115   AATAAAAAGAAAAAC            GTGGGTGC TATAT GCGCCCGC            CAGATACAACTATCC  57 35
AV939_RS15375 NONE
AV939_RS15370 NONE
AV939_RS15365 3588553 .. 3588574 -  -8.8  -5.36364   GCAAAAATACAAAAA           GCAGTTAG CTTGAT CTAACTGC            TTTTTTGGTTTTTCT 100 82
AV939_RS15355 3586019 .. 3586042 -  -9.6  -4.93696   TTTAAATACGAAAAA          CCGATACTCG TTTC CCAGTATCGG           TTTTTTGTCTAGCTT  91 74
AV939_RS15350 NONE
AV939_RS15345 NONE
AV939_RS15340 NONE
AV939_RS15335 NONE
AV939_RS15330 NONE
        murF NONE
AV939_RS15320 NONE
AV939_RS15315 NONE
AV939_RS15310 NONE
        murG NONE
        murC NONE
AV939_RS15295 NONE
AV939_RS15290 NONE
AV939_RS15285 NONE
AV939_RS15280 3568429 .. 3568453 -  -2.1  -4.85599   GGTACTTCAGAAAAA          TTCACTTCAAT TTC AGCGAGGTGAA          TTAGTCTGCTTGCTT  66 26
        lpxC 3567275 .. 3567291 - -10.8  -5.72207   GCTAAACGAAAAAAA              GCCGCC ATGTA GGCGGC              TTTTTATATACCGGT 100 41
AV939_RS15270 3566141 .. 3566165 -  -5.8  -4.37711   CGATTAAACGTAAAA          GACACTATCT AATTA AGATAATGCC          AAGCGATTACTAATT  72 83
        secA NONE
AV939_RS15260 3562897 .. 3562918 - -13.7   -5.4492   CACAGAGACAAAAAA           GGGCGGTCC ATGA AGACCGCCC            TTTTTTATTTTGAAG 100 67
AV939_RS15210 NONE
AV939_RS15205 3553714 .. 3553748 -  -9.5  -2.80474   TATAAGACGTGAAAT     GCCTGATCTATAAAT GAAAA ATTTATAGACCAGGA     TAGAATGGTAATACG  72 58
        pdhR 3552547 .. 3552578 -  -8.9  -3.66896   TTTATATATAGAGAA      TTCTTCCTTCGAC CTAATT ATCGAAAGAAGAA       TGACCAAATTACGTT  74 162
        aceE NONE
        aceF 3547748 .. 3547779 -  -6.7  -2.50077   GGCTTATAAAATCAC      CGAGAATGTTAAT GATATA ACAAACATTCTCG       TATTTTGATTTAAAG  56 35
AV939_RS15185 3546198 .. 3546213 - -11.8  -6.20267   CTAAAAATAAAAAAA              CCCGCC ATCT GGCGGG               TTTTTGCGTTAACTA 100 51
AV939_RS15180 3545382 .. 3545393 -  -2.2   -3.2818   GTAATATGGACAACA                GCGA CTTT TCAC                 CAGCGCATATTAAGC  45 289
AV939_RS15170 NONE
AV939_RS15165 3539636 .. 3539655 - -12.2  -5.61596   ACTGGCATAAAAAAA            GGCCACTT AAAC AAGTGGCC             TAAAGTGCCTCCAAA 100 78
AV939_RS15160 NONE
AV939_RS15155 3537319 .. 3537332 -  -4.5  -2.78278   TTAACGATACATAAT               GACCA ATTG TGGCC                GCAAAGAGGCTGGAG  48 48
AV939_RS15150 NONE
AV939_RS15145 NONE
AV939_RS15140 3535076 .. 3535106 -  -7.6  -3.33171   TTCAACAACCATCAA      GCTGCCTTG-GCT AGATAA AGCTCAAGGCTGC       TTATCACTGTTTTAC  67 56
AV939_RS15135 3533966 .. 3533981 -    -9  -3.05046   CCATGCTGTGAAAAC              CTAGCG TAAG CGCTAG               CCAGCATAGCCTGAA  69 151
AV939_RS15130 3533130 .. 3533147 - -12.7  -5.82281   AAAGACATAAAAAAA             CGCTGCC AATT GGCAGCG              TTTTCTGTTTCTACA 100 56
AV939_RS15090 3525315 .. 3525332 -  -2.1  -3.32291   TCAATATTATAAAAC             TCATGCAT CTA ATG-ATGA             TCATGCTATTTGTGA  45 180
AV939_RS15085 NONE
AV939_RS15080 3522620 .. 3522646 -  -3.1  -2.57931   TCCACCGCCTACAAT        GGCGATAT-CAA CATG TTGCATATCGGC         TCTCTTATTCTTTCA  43 94
AV939_RS15075 3521356 .. 3521366 -  -2.4  -3.88291   GAGTATCGTTATAAA                 GCGC CTA GCTC                 AATGTTTGACGTGCA  52 115
AV939_RS15070 NONE
AV939_RS15065 NONE
AV939_RS15060 3517322 .. 3517338 -    -8  -3.86346   GCATCGTTTTACAAA              GCCTCT TGAGT AGAGGC              CTTGCGTATGACCTT  72 39
AV939_RS15055 3513895 .. 3513925 -    -2  -2.52464   TGTCTTTTTAATTTA       TACATTTTGTTTAA GTA TTAATCAACATATA       ATTAACATATAATTT  39 164
AV939_RS15050 NONE
AV939_RS15045 3509080 .. 3509112 - -14.4  -3.06276   GTACAACAAGTAAAG     CCCCCTTATTAG-GA ATAA TCTCTAATAAGGGGG      GCGGCTGAATTAGTA  95 35
AV939_RS15040 NONE
AV939_RS15035 3505601 .. 3505644 -  -6.1  -3.25073   TGCTGAAGACCAATA CG-CGGTACTAGGCCGC-TGC CGTA ACATGCAACCTAGTACTGACG TTGAATGGACTTTAT  58 37
AV939_RS15030 3504305 .. 3504319 -  -5.6  -2.82516   TCCCTCACTACGACA               TGGGCC AAT GGGCCA               TAAATTATCTTTTAA  50 86
AV939_RS15020 3502236 .. 3502262 -  -8.9  -5.42259   TTAGCGTGAAAAAAA        GCCGCAATTTAT ATAA ATAAAT-GCGGC         TTTTGTTTTTAAATC 100 79
        gcvT NONE
AV939_RS15005 3499622 .. 3499652 - -12.8  -3.59063   ATAAAAACGTAAAGA       TAAAAAGGGGCT AATTAGA AGCCCCTTTTTA       ATAATTACTGGTTAC  95 70
AV939_RS15000 3496588 .. 3496606 - -10.3    -5.252   TAGCGGCACAAAAAA             GGTGAGC ACTAG GCTCACC             TTTTCAATTCTCTAT 100 75
AV939_RS14995 NONE
AV939_RS14990 3494573 .. 3494584 -  -2.2  -3.05844   TCCTTTAGCTGAAGA                TGCC ATTA GACA                 ATAGTCAATTAAATA  43 163
AV939_RS14985 3492794 .. 3492807 -  -5.3  -3.36578   CCAAATTAAAGAAAG               TGTAC TGCG GTACA                GTTTTGATACCGTCG  56 123
AV939_RS14980 3491952 .. 3491974 -  -9.8  -3.72893   GAGTCGTCGAGGAAA           CTGCCACGAC AAT GCCGTCGCAG           AGAGCTTCTTCCAGC  79 437
AV939_RS14955 3488108 .. 3488124 -  -6.5  -2.69998   ACTAAAGGAACTAAT              GCTGTGA CTA TCGCAGC              CAACATTGCTGACAC  56 192
AV939_RS14940 3481451 .. 3481461 -  -4.6  -4.56597   CTGCTGGTCTAAAAA                 CGGA CAC CCCG                 CAGAAATACAAATTA  69 438
AV939_RS14930 3478922 .. 3478963 -  -6.1  -4.64144   AATAACGTTTAAAAA TTGATATCTCTTATGAACA TCTG CATTTATAAGAGGTATCAA  ATCGCTGGCTGGGTA  74 257
AV939_RS14905 3474141 .. 3474153 -  -6.3  -2.77658   GAGCATACCGAAGCA                TTTGC TAG GCAAA                TATTTATACAGTGAA  54 85
AV939_RS14895 3472499 .. 3472527 -  -8.2  -5.52384   CCTTCATGAAAAAAA       GTCG-CGTATGCC TTAT GACACACGGCGAC        GGCGATTGGTTGCGA 100 9
AV939_RS14890 3472101 .. 3472112 -  -2.2  -3.10881   CTAAGACAAAGTAGA                CTGC GAGA ACAG                 TGCCTATTAAACGCT  43 43
AV939_RS14885 3468950 .. 3468980 -  -4.7  -3.15574   TCAACTTCATTAACA      TGTCGGCCAACGCG TTAC CACCTTAGCCG-CA       CCTTACTAATTGACT  52 31
AV939_RS14880 3468280 .. 3468312 -  -2.7  -4.14764   GTTTAAACAAGGAAA      GCATCAGCAGGCT AAAGTAG AACTTGCCAATGC      ACTTGCGTCAGATTT  56 130
AV939_RS14865 3463884 .. 3463912 -  -8.1  -5.46657   TAGCCTAAGAAAAAA        TGGGGTCTAAGTA ATG TACTCTGACCCCT        TTATTTAGACCCCTT 100 45
AV939_RS14855 NONE
AV939_RS14850 NONE
AV939_RS14845 NONE
AV939_RS14840 3458576 .. 3458592 - -10.1  -3.93288   TGTTAGGTAATTAAA              GCCCGAA TTA CTCGGGC              TTTTTTGTGCTCTTT  83 68
AV939_RS14820 3453752 .. 3453798 -   -19  -4.99035   TGAGTTATAGAAAAA TAACGGGGTCAGAGTCCGTTTT ATG AAAAAGTACTCTGACCCCATTA TTTAATCCGTTTTGG 100 27
AV939_RS14815 3452469 .. 3452509 -  -6.2  -4.82756   ATAGAATGAATAAAA TGGGGGCAGAGTACTTTTA CAAT TAATTG-ACTCTGACCCCA  TTATTTATCTACTTA  77 34
AV939_RS14805 3450817 .. 3450829 -  -5.5  -4.08689   TACGCAACAATCAAA                CCGGT GAA ACCGA                AACGCTTTCTGGTAT  65 131
AV939_RS14790 3448115 .. 3448126 -    -3  -3.28791   ATTCTGTCGTGAGAA                CTTA TCGG TAAG                 GATTTTCGCCCATAG  46 15
AV939_RS14785 NONE
AV939_RS14780 3446110 .. 3446121 -  -2.2  -2.68487   TTAACGACTAGACGA                TGGA CTCC CCCA                 TACCAACGCCCTGAT  40 117
AV939_RS14770 3443430 .. 3443446 -  -7.9  -4.02534   ATGGAAATGGAGAAA              GCTGGCG ACG CGACAGC              TGAAGGCTACAAAGA  74 362
AV939_RS14750 3438858 .. 3438870 -  -9.1  -2.84229   ATACGTCCATTAAAC                GCGGT TAC ACCGC                TTACGACTTCGTTAT  67 99
AV939_RS14735 3436840 .. 3436858 -  -6.7  -3.18768   TATTACAAGTGAACA             TTGCGAC TTAAC GCCGCAA             CCAAACGCAACCATG  59 320
AV939_RS14725 NONE
AV939_RS14720 3433896 .. 3433912 -  -2.2  -2.89569   TTGGTAAACTAACCA             CTGCGCC CATC GACGC-G              ACATCGCGTTAATAT  42 2
AV939_RS14715 3432639 .. 3432670 -    -5  -3.62418   ATAACTTACCTGAAA      TGGGGCGCCAATCA ATAA TGCTGTACGCCCCA       GCTATACTTTGTTTG  57 42
AV939_RS14710 NONE
AV939_RS14705 3431209 .. 3431224 -  -3.2  -4.14874   ATAATAGGGTTAAAA              GCGC ATTAGCCG GCGC               TGAAGATTTTCGTTC  57 4
AV939_RS14695 3429416 .. 3429474 -  -9.8  -3.73144   ATAGTACGAACAGAA CCCATTTAGTTGACATTGTCAACTTT TTTCATT AAGGTTGACATTGTCAACTAATAGAG TGAGCGTGGTCATCA  81 482
AV939_RS14685 3428972 .. 3428987 -    -9  -4.03888   CATTTATAACAATAA              GGTGAG TTAA CTCACC               TTTCATCTAAATTAT  79 21
AV939_RS14670 3425145 .. 3425160 -  -4.7  -4.79352   CCAGCTACAACAAAA              CCTAC GGTTCG GTAGG               TGGCATTATTATTCT  73 290
AV939_RS14655 NONE
AV939_RS14650 NONE
AV939_RS14645 3418864 .. 3418874 -  -3.2  -3.51934   CGCTTTCGATAAACA                 CTCG GCT CAAG                 CCCTTGGTCATTCTA  49 46
AV939_RS14625 3414852 .. 3414864 -  -4.9  -4.78326   TTTGAAATAAATAAA                TTTCA ATG TGAAA                TATTAATATGAGTGT  72 46
AV939_RS14620 NONE
AV939_RS14615 3410157 .. 3410169 -  -2.7  -4.26076   TCATCCTGATTAAAA                TTCAA TCT TCGAA                GCGTAGGGATTAGAA  58 35
AV939_RS14610 NONE
AV939_RS14605 NONE
AV939_RS14600 NONE
AV939_RS14595 NONE
AV939_RS14590 NONE
AV939_RS14585 NONE
        leuD NONE
AV939_RS14565 3399066 .. 3399083 -  -7.1  -2.81225   GAGATAATGGAATCA             TGCATTT TCTT AAATGCA              GAAAAAACCTTATTG  58 263
AV939_RS14550 NONE
AV939_RS14545 NONE
AV939_RS14540 NONE
AV939_RS14535 3394168 .. 3394185 -  -9.9  -3.35531   TATCAAAAATATATA             TCGCCAA GTTG TTGGCGA              ACGGTGTTTGATTAG  78 48
AV939_RS14530 NONE
AV939_RS14525 3391800 .. 3391834 -    -5  -3.04144   CCTCGACGCTCAATA     GACAAACGCAGTATTG ACT CAACCATGTGTTTGTC     TCCCAATATTTAGGG  51 70
AV939_RS14520 3388679 .. 3388704 - -12.7  -4.43012   ATTTTAAGACGAAAA         GCACCGTATCT TCTT AAATACGGTGC          TTAACAATCACACTT 100 33
AV939_RS14515 3386195 .. 3386231 - -18.9  -4.96848   GTTTGGACATAAAAA    GACCCCCAGTAATTGGA TAG TCCAACTATTGGGGGTC    ACTTCACACACAGGT 100 149
AV939_RS14500 3382509 .. 3382526 -    -7  -3.40592   TACATGAAAAGTTAA             GGTGCT TTGGCC AGCACC              TTGAGCGTGCGACTT  66 81
AV939_RS14495 3381709 .. 3381722 -  -2.3  -3.14463   AATTTTTGCTAGTAA               GTGCG TAAT CTCAC                CTACAATTCTTAAGC  43 35
AV939_RS14490 3380891 .. 3380928 - -12.9  -2.85503   GTTGAACATTTAAAG   TATATGGCAGCGGAAAGT TCT ACAC-CCGCTGCCATATA   TACCGTGAAATTACA  90 62
AV939_RS14480 3379084 .. 3379098 -  -2.1  -4.24294   ATTAACGAGTCAAAA               GCAAT TTGAT ATCGC               GTTTCGGGTAGGAGA  57 466
AV939_RS14470 NONE
AV939_RS14465 3377913 .. 3377932 -  -4.2  -2.57211   ATGGTGGCTGATAAT            GGCGCTAC GAGG ATATCGCC             GCGATATTAATATTG  44 174
AV939_RS14430 3370865 .. 3370893 - -10.4   -5.1101   CTACCATTTAAAAAA        GAGCCAAGCTTC TGATG AAAACTTGGCTC        TTTTAAGATCGTATG  93 117
AV939_RS14425 3367357 .. 3367379 - -14.9  -5.64873   GGTAAGAATAAAAAA           TGCGGCAGC GTAAT GCTGCCGCA           TCTGTTTTTACTAAC 100 46
AV939_RS14420 3364726 .. 3364740 -  -5.6  -2.55361   CTACCCAAAAAGCAC               TTGGCG ATG CGCCAT               CTATTAGCTTTGATA  50 376
AV939_RS14410 3363074 .. 3363099 - -10.5  -3.01712   CCTCTCCTCGGAACA         TGGCTTACGTC AAGT GACGTAAGCGA          AGGTGTATGAGGTTA  77 111
AV939_RS14405 3362212 .. 3362245 - -19.8  -3.17075   TCTCGCTGAACTTAA     CTCCATGTCATGCC TAATAC GGCATGACATGGAG      TGGATAGCACGTAGA 100 98
AV939_RS14375 3356598 .. 3356626 -    -9  -2.91383   ACTTTTACTCATATA        TAAAGGCCAG AGAGAAAAG CTGGCCTTTA        TCCTTTTTCGACAAC  69 64
AV939_RS14360 3353137 .. 3353148 -  -2.2  -4.21465   GTTAAAACCAAACAA                GCAC CTAA GTAC                 AAAACGCCACTAAAA  57 213
AV939_RS14350 NONE
AV939_RS14345 3350210 .. 3350224 -  -8.5  -3.44325   AGTGTGCAGAATGAA               GCCGG ACATG CCGGC               CATGTGTTGATTGGT  71 193
AV939_RS14340 3347096 .. 3347130 -  -9.4  -2.90598   GAAATACCAGAACTA    TCACTTACGGCGCTT ATAAAA AAGCGCCGC-AGCGA     ATAGTATTAACGACC  73 42
AV939_RS14335 NONE
AV939_RS14330 3344026 .. 3344065 - -10.9   -3.7347   TGTAATATTGAATAA  TCGGAAGTGACTTCGCT AGAGTA AACAAAGTCACTTCTGA   ATTTTTTTGCTCGGG  84 53
AV939_RS14325 NONE
AV939_RS14320 NONE
AV939_RS14315 NONE
AV939_RS14310 3340512 .. 3340530 -  -4.6  -3.42503   CGGCAATAGTCATAA             GCTTATGT TTG AAATAAGC             GAATATAGAAAATAA  53 136
AV939_RS14305 3339333 .. 3339358 -  -9.8  -2.90751   GCTAATAATTTAAAC         GGCTGTCAAC ATAACA GTTAACAGCC          CAAACCCCATTAAGT  75 85
AV939_RS14295 3336023 .. 3336051 - -12.6  -5.47431   GTAAGATACAAAAAA       GCCCTTGG-TGTT TTGC AACAACCAAGGGC        TTTCATTAATGCTTA 100 58
AV939_RS14275 3331497 .. 3331512 -  -6.8  -3.07935   ACGTTATGGAGCGAA              GCACTC GCTA GAGCGC               AGGACTAACGTCACT  60 39
AV939_RS14265 3327894 .. 3327906 -  -4.1  -4.17048   TTGCTGGGAAAATAA                CGGTT GAT AACCA                GCCTTCTAGCAGCAT  62 490
AV939_RS14245 3325613 .. 3325625 -  -5.5  -3.14564   TCAGTTCGCGATTAA                GAGGT TTT ACCCC                ACACTGAACTTGGCT  54 9
AV939_RS14240 3324221 .. 3324234 -  -5.3  -3.61646   AATTGCATAAACGAA               TGCAA ACAC TTGCA                CTATTGCTAACCAAT  59 74
AV939_RS14235 3323604 .. 3323619 - -10.4  -4.98616   TTAAAACAGCAAAAA              GGTGGC CATG GCCACC               TTTTTTAGATTATGT  93 99
AV939_RS14225 3321698 .. 3321711 -  -4.5   -3.8377   AATGTGGATATTAAA               CTAGC TTAC GCCAG                TTTAGCGTTAAAAAA  57 17
AV939_RS14215 NONE
AV939_RS14210 3316888 .. 3316916 - -12.5  -5.73978   ATCAGAAATAAAAAA        GCGCCCTACTCAC CAA ATGAATAGAGCGC        GTTTTCAATTCAGTG 100 44
AV939_RS14205 3315841 .. 3315860 -  -6.4  -3.18264   CCCTGCATTTATTAA            CGAAGCAC AAGA GTGCTTAG             GGGGGCTAGGTTATG  57 468
AV939_RS14195 3313556 .. 3313567 -  -5.8  -3.11192   GATAGCATCAGGCAA                GCAC CTCC GTGC                 TCATACCTCTTTCCT  57 40
AV939_RS14190 3312265 .. 3312290 -  -8.3  -5.03994   CTCTAGATACAAAAA         TGCCCACCG-AC TTA GTGCGGCAGGCA         TCAATAATTAAGTTA  91 71
AV939_RS14185 3311354 .. 3311391 - -13.5  -4.25256   TGGTGATTAAAATAA   GTTAC-TGGCCCACCCAG TTG CCGAGTGGGCCATGAAAC   TGTAAACAAACGTTA 100 57
AV939_RS14180 NONE
AV939_RS14175 NONE
AV939_RS14170 3308806 .. 3308844 -  -6.9  -3.24924   CCGTTAGTTACAACA  GCGCGTTTAT-TTGAC GCTCTCTA GTCACGATAAACGCGC   TAAATTAAATGCTCA  64 70
AV939_RS14160 3305655 .. 3305673 - -10.3  -3.77111   CAGTAAAAATGAGAA             TAGGCGC ATAAA GCGCCTA             TTTTTTGTCCATGAA  83 52
AV939_RS14140 3298988 .. 3299028 -  -5.5  -2.60725   CTAAACTATACTAAT  CTTTAAGGTCAGAGTTAAT AAA ACCAACTCTGACCTTGCAT  CGTTTTGCCTAATTA  51 49
AV939_RS14130 3297945 .. 3297960 -    -4  -3.31777   AATAGATGAGAAAAG              GCTATT TTAT AACAGC               ATCGCTAGGGCTATC  49 11
AV939_RS14125 3296633 .. 3296648 -  -3.2  -3.67775   ATGTTGAGCTAAGAA              GTACGA GGTT TCGAAC               CAGTCTGAGAAACAA  51 130
AV939_RS14120 NONE
AV939_RS14115 3295249 .. 3295263 -  -5.6  -3.18239   CATATATCTCAGCAA               CATGGG CTT CCCTTG               CGATTGGAGTTATTG  54 500
AV939_RS14090 NONE
AV939_RS14085 3286692 .. 3286729 -  -3.4  -3.19568   GTAGCTACAATAAAG   CACAGCAGGATGGA AAGCTTAACG CCCACCCAACTGTG    AATTGCAATCCATGT  46 59
AV939_RS14080 3285344 .. 3285358 -  -2.8  -3.31232   CCCTTTACACAAAAC               TGACAG TAG CTTTCA               AAAAACGCGATGCTA  46 134
AV939_RS14075 3283072 .. 3283103 - -21.8  -4.87133   ACTGGGTAAATAAAA      CAGCCCTCTAGCTT AAAT AAGCTAGAGGGCTG       TTAAGTATTACGGCT 100 103
AV939_RS14065 3280942 .. 3280972 -  -6.9  -5.63517   TGGCTAAACAAAAAA       CTAAAATGGCACC GAAAA GGTGCCATTTTCT       GCTCGCGCTGTTTCA  93 96
AV939_RS14055 NONE
AV939_RS14050 3278012 .. 3278047 -    -2  -2.95448   CTAAACTCAACCACA    GTATAATCATTTGTTA TTAC TAACAATTACTTACAC     TCATTAATCAGGACA  42 29
AV939_RS14045 3277296 .. 3277307 -  -5.8  -2.70932   TGGCGGGGTGAACTA                TGCG GCTT CGCA                 CTGAACTCGAAGGTA  54 11
AV939_RS14040 3273480 .. 3273490 -  -6.8  -3.70919   GTGAAATTTGAACAA                 CAGC TTA GCTG                 TGAAATGAATAGAAG  64 453
AV939_RS14030 3269806 .. 3269819 -  -9.5  -5.55769   TTTTATAACAAAAAA               GGGCC GTTA GGCCC                CTTTAATTATCTGCG 100 53
AV939_RS14025 NONE
AV939_RS14020 3269029 .. 3269050 -  -7.3  -3.29273   TTTATTAGCAGAATA           CGGTCAG TTTTGCTG CTGACCG            TTAGAGAGTCATTTA  64 34
AV939_RS14010 NONE
AV939_RS14005 3265744 .. 3265758 -  -7.2  -2.58714   TGTGATACCAAGCTA               TTAGCA CTT TGCTAA               TGTCTAGGCTGTTAT  59 155
AV939_RS14000 NONE
AV939_RS13995 NONE
AV939_RS13990 3262504 .. 3262528 -  -4.3  -2.53208   AAAGGATAAAACTAC         GCCCTAGCAC TTATTC GTAC-AGGGC          TGAGTTATTATTTTA  47 58
AV939_RS13985 3261701 .. 3261733 - -15.7    -4.564   AAGCTGAAATTAAAA      GGCCTGAGTCCGATA CAA TATCGAAATCAGGCC      TTGGTTGCCGCTTAG 100 140
AV939_RS13980 3260498 .. 3260510 -  -3.3   -3.4285   CGAGGCAACCGAGAA                GACGG CAA CGGTC                AGCGCCCCTCTCGAG  50 436
AV939_RS13965 NONE
         upp NONE
AV939_RS13955 3257379 .. 3257401 -  -6.4  -3.22653   ATTATTTCGACAACA           TACTAAACCA AAG TGTTTTAGTA           GCTTCAGATGCCCGC  57 270
AV939_RS13925 NONE
AV939_RS13920 NONE
AV939_RS13915 3246450 .. 3246477 -    -5  -5.39755   TAGAACCACAAAAAA        TAACCCTAAT AGTAAATA ACTAGGGTTA         CGAGTGTAAATGTTA  82 68
AV939_RS13910 NONE
AV939_RS13905 3245494 .. 3245506 -  -5.5  -3.57561   CGTCAATTTTTGAAA                GAAGG TTG CCCTC                CCCAATCAAGCGATT  59 40
AV939_RS13900 3244318 .. 3244330 -  -3.4  -3.31183   ATAACTTAAACCCAA                GGTA CAGCT TACC                TCGCTTTTACCTTAC  48 102
AV939_RS13895 3243630 .. 3243655 - -16.3  -4.06611   TAATGATAATAATAA         CAAAGGTGAGC AGTA GCTCACCTTTG          ATTTAACTAATCGTC 100 39
AV939_RS13885 3239637 .. 3239651 -  -2.8  -5.75342   CCCCCCCAAAAAAAA               CATGCT TAA AGCATT               ACGCTAGTAGCTTAC  85 49
AV939_RS13875 3237669 .. 3237684 -    -4  -3.92005   AGATATAAATTTAAA              TAACGT CGAA ACGCTA               GGTTAGCTTATTACG  57 23
AV939_RS13870 3236322 .. 3236333 -  -4.4  -3.58726   TGGGTCTAGATAGAA                GCTT CGGG AAGC                 ACTTAGTAACAAGCT  55 192
AV939_RS13845 NONE
AV939_RS13840 NONE
AV939_RS13835 NONE
AV939_RS13830 NONE
AV939_RS13825 NONE
AV939_RS13820 NONE
AV939_RS13815 NONE
AV939_RS13810 NONE
AV939_RS13805 3221273 .. 3221284 -  -2.2  -2.95896   TTATTATTTACAAAC                GCAG GAGT CTAC                 TGTCGTTTATTTAAT  42 72
AV939_RS13800 3219887 .. 3219905 -    -3  -4.65895   CTGGTCACTGAAAAA             TCGCATAG TTT CAAAGCGA             AAGAAAAATTGAATA  65 225
AV939_RS13730 3203749 .. 3203759 -  -2.6  -3.50853   CGCCGGTAACCAGAA                 TTTT CAT AAAA                 GTCCTATTTTCTATT  47 36
AV939_RS13725 3202584 .. 3202616 -  -9.2  -3.92602   TTAATACGGGAGAAA      TTTCAGCGGTAGAC TTTGC GTTAACCGCTGAAA      TGAAGAACCATTTGT  79 148
AV939_RS13700 3194797 .. 3194817 -  -5.4  -5.24989   CCATATATCAAAAAA           CGAGGG-CG CGGA CGACCCTCA            TCCTAAATGGGTCGC  81 210
AV939_RS13695 NONE
AV939_RS13690 3192203 .. 3192236 -  -4.3  -2.56914   GATTTTAGTAAGCGA     GCCAGGCACTACGGC GTAT ACCGAAGAGCTAGGC      CGAATGACTGCGTTG  46 151
AV939_RS13640 3185137 .. 3185152 -  -2.6  -5.62045   AGATAGAAGAAAAAA              CCTTAA ACGG TTAAGA               TTCAGCCCAGATAGT  80 166
AV939_RS13635 3183789 .. 3183819 -  -7.6   -4.0371   TATCGTTGAGATAAA       GAAATAGGGCGG TCATCCT CTGCCCTATTCC       CTAAAATATCGTTTT  75 55
         tgt NONE
        yajC NONE
        secD NONE
AV939_RS13615 3179287 .. 3179308 - -13.1  -5.86332   CGAAGGCAAAAAAAA           GCTAGTCAG TAAT CTGACTAGC            TTTTTCGTGTCTGGC 100 59
AV939_RS13610 NONE
AV939_RS13605 NONE
AV939_RS13600 3174249 .. 3174259 -    -4  -4.03811   TATACCATGAAACAA                 TTCT GTG AGAA                 CGCAGGTGACAAGGG  59 234
AV939_RS13590 3172084 .. 3172101 - -11.3  -4.91429   AAAGGTTAAATAAAA             GCGGTGT TCAT ACACCGC              TTTTTTTGTGCCTGT  93 41
AV939_RS13580 3170207 .. 3170217 -  -6.8  -3.33412   TAATTCTAGAGAACA                 CGAG TGC CTCG                 CCTAGTTAGGTGATT  61 27
AV939_RS13575 3169201 .. 3169226 -  -4.7  -2.70994   TTAATTTCATAGAAT         CCTCCCGCTAT TAAG ATAGCAGGAAT          TTTCACATACCTGAC  49 182
AV939_RS13570 NONE
AV939_RS13565 3167461 .. 3167491 -  -4.1   -4.2349   TTTGGACAGTTAAAA      TACCCG-TCAGTGA AGCT TGACTAAGCGGGTA       CAACATCGCCTTAAC  62 36
AV939_RS13560 NONE
        sufC NONE
AV939_RS13550 NONE
AV939_RS13545 NONE
AV939_RS13540 NONE
AV939_RS13535 NONE
AV939_RS13530 3161122 .. 3161132 -  -4.6  -2.84192   GACACTATTATGACA                 GCGA TTA CCGC                 GACTTAGGCAAGGGA  48 91
AV939_RS13525 3160508 .. 3160537 - -14.5   -4.0827   ACAGACTTACAGAAA       CAAAAAACGAGGC CGAA GCCTCGTTTTTTA        GATTCGGTCGTTTGC 100 43
AV939_RS13520 NONE
AV939_RS13515 NONE
AV939_RS13510 3156883 .. 3156893 -  -6.8  -3.32993   TTACCTACATAGGAA                 GCGA GAA TCGC                 GCAATCTGGCCATTT  61 4
AV939_RS13505 3155699 .. 3155716 -  -5.5    -4.323   GCTAAATAGTGAAAA             GCCCC GCATTATA GGGGC              TTTGAAGATAAACAA  68 54
AV939_RS13500 NONE
AV939_RS13495 3153647 .. 3153682 -  -6.8  -4.15864   TAGAACAACCAGAAA    GCGTTACAGAGATGGC CAAT GCCATGCCCATCACGC     GAGCAAATCGGCCCT  71 97
AV939_RS13490 3152335 .. 3152373 - -16.8  -5.32608   AAAAAAGCTAAAAAA   CACAAACCGCAAGTAAGC ATA GCTTACTTGCGGTCAGAG   TGTGATTGGGCATTA 100 118
AV939_RS13485 3150741 .. 3150766 - -10.4  -5.83211   CACTAAAACAAAAAA         GGTCGGCGCT TGTAAT AGCGTCGACC          TTTTTATATGTGTGA 100 115
AV939_RS13470 3146315 .. 3146332 -  -5.5  -2.72379   CGAAGGCGGCAATGA             GGCGG AAAGGTAA CCGCC              TCACGATGCGCTGTA  51 64
        guaA 3144595 .. 3144614 -    -2  -5.19212   ACTACTATCAAAAAA            TTGTGCGC TTTT GCGCTTAA             AAAGCCTCTTCGCTT  72 109
AV939_RS13460 3142997 .. 3143008 -    -3  -2.63382   GGTCATATCTAGAAG                CTAT AATT ATAG                 TATCAGCGTGTTTGA  41 345
AV939_RS13455 3140650 .. 3140666 - -13.7  -5.44119   GGGATTTTAAAAAAA              CGGAGCC TAT GGCTCCG              TTTCATTATACGCAA 100 50
AV939_RS13450 3139663 .. 3139690 -  -7.1  -3.59233   TAAGTATTAAATCAA        TAAGAGGCC TTATTTGATG GGCCTCTTA         TTCAAATAACACCAG  67 27
AV939_RS13415 NONE
AV939_RS13410 3133053 .. 3133079 - -10.2  -3.19449   TAAAGATTCGACCAA         TCCGAATCAGGT CCT ACCTGACTCGCA         TGGCGCGTCCGGCAG  76 26
AV939_RS13405 NONE
AV939_RS13400 3132789 .. 3132805 -  -5.2  -3.27012   AAAGCACTTACAACA              GCTTTT GTAAA AAAAGC              TTAAAATATGGTGCG  54 34
AV939_RS13395 3132527 .. 3132544 -  -2.7  -4.37763   CGAGTTAAAAAAAGA             CG-CCGTA GTA TACAGTCG             CAGAGAACCAGAGTC  60 152
AV939_RS13390 3130982 .. 3131001 - -12.2  -5.61881   CGTTAAAAACAAAAA            TGCTCGGA AGGC TCCGAGCA             TTTAAGCAGTTGCTG 100 70
AV939_RS13385 3130277 .. 3130291 -  -4.2  -4.23528   GAACCGAAAACCAAA               TCGTGC CAA GCACTA               GTTCAGGTCTACTAT  64 52
        clpX 3128927 .. 3128940 -  -8.1  -5.86976   TTAGAAAACAAAAAA               GGTCC CGAA GGACC                TTTTTTTAAACGTAA 100 47
AV939_RS13375 3126155 .. 3126175 -  -6.9  -3.64162   ATCAATTATTGCAAA            TTTAAGGCT GCA AGCCTTTAA            AATTAGGACATGCAG  67 50
AV939_RS13370 3125583 .. 3125604 - -15.9  -5.72622   GTTACAAATAAAAAA           GGCGATGGC ATAA GCCATCGCC            TTTTTCTTGCAAGTT 100 45
AV939_RS13365 3123269 .. 3123314 - -14.1  -5.61596   ACGCCCACAAAAAAA GCCAGTGTTGGCGAAGCGATA ACAA CATCGCTTGTTCAACACTGGC TTTTTTAGTGTATTT 100 157
AV939_RS13360 3121220 .. 3121233 -  -6.7  -3.05535   GTAAAGACTATAAAT               CTGAG TTTA CTCAG                TTAAAGCATTTACTC  58 259
AV939_RS13340 NONE
AV939_RS13335 NONE
AV939_RS13330 NONE
AV939_RS13325 3113835 .. 3113848 -  -9.5  -5.17353   ACAGTTAGTAAAAAA               GCGCC TATT GGCGC                TTTTTTTGTGCCTTT  91 83
AV939_RS13315 NONE
AV939_RS13310 3110541 .. 3110568 -  -9.2  -3.63515   GGTTACCTTTAATAA        TACCCAACGCCT CGTT AGGCGTTGTATA         GGCTTGCATTGGTCG  78 77
        ileS 3107695 .. 3107706 -  -2.2  -3.27298   CCGCCGAAGTATTAA                GCAT ACTG ACGC                 GTTTCCCCTTCGCCA  45 10
AV939_RS13300 NONE
AV939_RS13295 NONE
        ispH 3105669 .. 3105690 - -10.9  -5.79526   ATAGCGTAAAAAAAA           GCACCGCAT ATCA ATGCAGTGC            TTTCAAATGCAACCC 100 62
AV939_RS13285 3104876 .. 3104896 -  -6.1   -5.1523   TCTACAAGAGAAAAA            CCCTGTGCA CGC TTCACAAGG            TTAAATCCTTTATTA  80 18
AV939_RS13280 NONE
AV939_RS13275 NONE
AV939_RS13270 3099393 .. 3099411 -    -3  -2.80016   CGTCACTACTAATCA             CCGAGATG TAT CCTCTCGC             TCAGTTTCGGAATGC  42 4
AV939_RS13265 3098800 .. 3098818 -  -2.4  -4.02315   AAGTAAAAACCGAAA             GCCAAGCT ATT AACTTAAC             ATTGACGGTTGTAGT  55 133
AV939_RS13240 3095783 .. 3095797 -  -2.9  -3.91716   TTAGTGGCGAAATAA               TGATA AGCCA TATCA               AATACAGGCTACCTT  53 34
        nadE NONE
AV939_RS13225 3093626 .. 3093655 - -13.7  -3.24902   TAAGAGTATTACTAA       CTAAAAAGGGAGC CTTG GCTCCCTTTTTTG        TTCTTAGCGTTAACG 100 105
AV939_RS13210 3091543 .. 3091554 -    -3  -3.66772   CTAAAGCTGCAATAA                GAAT TAGC ATTC                 CTACTACATGTCGCC  49 58
AV939_RS13205 NONE
AV939_RS13200 3090060 .. 3090108 - -23.5  -5.26155   ATAGAAATACAAAAA GCCCACTTCCTAATACAGCATAT TCA ATTCGCTATATTAGGAAGTGGGC TTTTCTATTTACCTT 100 152
AV939_RS13190 3087528 .. 3087549 -  -4.6  -3.02144   TTAGTCTGCTCAATA           TAATGAAA GTTCAT TTTCATTA            TATTTAATTTTCTAA  49 29
AV939_RS13185 3086778 .. 3086806 - -13.9  -2.93708   GTTGGCTAAAAACAC        GCGTACCAGCACT AAA AGCGCTGGTACGT        TATTACGATAATCTA  95 83
AV939_RS13180 NONE
AV939_RS13175 3085161 .. 3085177 -    -3  -3.38991   ATTTTGGTAATAATA             TTGC-CG AATT CGCGCAA              GTATTACGCTAAATA  47 34
AV939_RS13170 3083172 .. 3083186 -  -2.9  -4.41817   TAAAATAAGCGAAAA               GTAAT TGGCC ATTAC               TTACCTACCTTCAAA  60 22
AV939_RS13165 NONE
         rnc NONE
AV939_RS13155 3080643 .. 3080676 -  -9.1  -2.85351   CGTTCTTACATTATA     TTTTGGGCT-AACG ACTATTG CGTTAAGCCCAAAA     CAGATAATTGCTGAG  68 43
AV939_RS13150 NONE
AV939_RS13145 3078714 .. 3078724 -  -6.8  -3.07994   TTTAAGCGTATTTAA                 TGCC CAA GGCA                 TTTATATAGCGCCTT  58 368
AV939_RS13135 3076897 .. 3076912 -  -6.2   -4.2237   AAAGGAACTTGAAAA              TAAGCT TTGG AGCTTA               GCTGCCTGTTCACAC  70 373
AV939_RS13125 3072380 .. 3072407 - -11.4  -3.31726   GTTTTCTACATAATA        TAAAACGGGCTT ATAT AAGCCCGTTTTT         TTATGTCGTGCTGGC  84 522
AV939_RS13110 3069290 .. 3069317 -  -3.4  -2.86564   CAATTTAATTTAAAT        GGCGCAGG-TTTA ACG TAACGCCTGCGCT        CCATTGAGATCAGAC  44 35
        glyA NONE
AV939_RS13100 3067301 .. 3067313 -    -2  -3.09516   CGCCCTACTAGGCAA                TTCA TTGAT TGAA                CGACTACTGTGTTTT  43 114
        ribD NONE
AV939_RS13090 NONE
AV939_RS13085 3064290 .. 3064301 -    -3  -3.86015   CACCTTTCCTATAAA                TTAC TTAC GTAA                 ATTGCATTAGCTTGT  51 95
        ribH NONE
AV939_RS13075 3063144 .. 3063155 -  -2.2  -3.12351   CTTTGTGACATCCAA                TGCC ACTG GACA                 AGGTTAATCGCGTTC  43 29
AV939_RS13070 3062131 .. 3062147 -  -2.2  -3.28791   ATTCTTTTTGCATAA              GATGCT CTGTT AGCTTC              TAGAAAGTATGCTCG  45 25
AV939_RS13065 3061550 .. 3061577 -   -15  -4.58663   ACTAGCTTTTAAAAA        CAAAAAGCCCGC AGTA GCGGGCTTTTTA         GTATGTTCAATTTTT 100 76
AV939_RS13045 NONE
        motB 3056408 .. 3056439 - -14.6  -4.16279   GAGACGATTTCAAAA      TAAAAGGGCGAATC ATCT GATTCGCCCTTTTT       GATTTTGCGTTCTGC 100 50
AV939_RS13010 NONE
AV939_RS13005 3050290 .. 3050300 -    -4  -2.78712   GGTGGAACCTAATCA                 TTAC TCT GTAA                 CATACCTTTTAATCT  45 8
AV939_RS13000 3049475 .. 3049497 - -14.2  -5.14965   AGCTGGATCAAAAAA           GCGCAGTTCA CAA CGAACTGCGC           TTTTTTTTGAATTTA 100 90
AV939_RS12990 NONE
AV939_RS12985 3046719 .. 3046729 -    -4    -3.918   AGAGAAACGATTAAA                 GTTT CGT AAAC                 CTTTGATTTAGCGCA  57 33
AV939_RS12980 3043991 .. 3044017 - -10.3   -5.4251   TTTATATATAAAAAA        GCCACACTATCT ACCA AGAT-GTGTGGC         TTTGTTTTATCTACA 100 69
AV939_RS12960 3037830 .. 3037871 -  -7.5  -3.02639   ATTGTTAAAGAACTA TCGTGCAAAAATCATAATGC GAA GCATTCTG-TTTTTGCGCAA GGAGGACTAACACTA  64 158
AV939_RS12955 3036149 .. 3036169 -  -4.7  -4.54297   TTAATAACAAAACAA            TCTGTGTAG GCA CTACACTAA            CAATGTCACCATCGA  70 45
AV939_RS12950 NONE
AV939_RS12945 3035749 .. 3035790 -  -7.5  -5.21709   CCTTAGAGTAAAAAA CCCTAATCAATGCTTACTC ATTC GAGTAAAAATTCATTAGGA  TTCATGGTCCAACAT 100 171
AV939_RS12940 3032195 .. 3032218 -  -2.4   -3.4398   TGCCAAGGCAAAAAC          TTTTGCAAAC GTTA GTTTGCGTAA           TACCGACTTATTTAG  46 168
         rrf 3032001 .. 3032022 - -13.1  -5.76633   TTAGACATAAAAAAA           GCCCTTATC ATAC GATAAGGGC            TTTCTTCGAATGGGA 100 74
AV939_RS12925 3029167 .. 3029198 -  -4.2  -2.83255   AGAAGAGTTAGCATA      GATTGAGAGGCGGC TAGC GCCGCTTCCCTCCC       AGTTTACAAAAAGCA  48 29
AV939_RS12905 3024121 .. 3024138 -  -9.1  -4.80882   ATTTCACACTAAAAA             GGCCATC GAAT GACGGCC              TTTTTTATACTGCAA  88 52
AV939_RS12900 NONE
AV939_RS12895 3022409 .. 3022440 -  -7.4  -3.15503   TCCCAACATTTAACA      GCCAAAGTTACACA CCCG CGTACAACTTTAGC       CTTTCTTCACTTAAG  62 81
AV939_RS12890 NONE
AV939_RS12885 NONE
AV939_RS12880 3018269 .. 3018291 - -10.7  -5.38047   GACTGATACAAAAAA           GCTCAAGAA TTAAT TTCTTGAGC           TTTTTTTTCGAATCA 100 95
AV939_RS12865 NONE
        recR 3013932 .. 3013955 -  -9.6  -2.51642   ATATTATTGAGGAAG          CGCCGCAA TTTAGAGT TTGCGGCG           ACCAGAAAAGGCGTG  71 11
AV939_RS12855 3011863 .. 3011877 -  -9.2  -5.72622   TCTAGAAACAAAAAA               CGGGCA TTA CGCCCG               TTTTATATTAATTAA 100 57
AV939_RS12850 3010915 .. 3010930 - -11.8  -5.57396   ACAAGTAACAAAAAA              GGCCGC TACT GCGGCC               TTTACAAATCAACAA 100 47
AV939_RS12845 3010390 .. 3010406 -  -9.5  -3.60473   TATATACCAAAGCAA              CGTTTAG GTT CTAAACG              CTAGCGCTAACTGTG  78 61
AV939_RS12825 NONE
AV939_RS12820 NONE
AV939_RS12815 NONE
AV939_RS12810 NONE
AV939_RS12805 3001399 .. 3001417 - -10.4  -5.05153   ACTGTAAAAAAGAAA             CCTTAAGA AAA TCTTAAGG             TAATTCATTTTTGTT  93 43
AV939_RS12800 NONE
AV939_RS12795 NONE
AV939_RS12790 2998163 .. 2998203 -  -6.2  -2.54801   CACGCTGAAATACAG TGGCGGTGTAACGC-AGCGC GCT GCACTAGCGTTT-ACGGCCA TCATATCGAACAATA  53 66
AV939_RS12785 NONE
AV939_RS12780 NONE
AV939_RS12775 2995118 .. 2995130 -  -3.4  -2.84574   GAGGTGAACGAATCA                TGCA ATTTG TGCA                ATGGGACGCAAGCCA  44 10
AV939_RS12770 NONE
AV939_RS12765 2993389 .. 2993414 - -13.5  -4.66318   ACGAGCTTAAGAAAA         GAGCAAATTAC TCTC GTAATTTGCTC          TTTTTTATTTTAATC 100 113
AV939_RS12720 NONE
AV939_RS12675 NONE
AV939_RS12670 2977439 .. 2977456 -  -5.5  -3.25515   ACGTAAAAGTGAATA             TTTGGCC GCTA GGCCATA              AAGCGGTGCATTATG  56 123
AV939_RS12665 NONE
AV939_RS12660 2974636 .. 2974653 -  -3.5  -2.86259   TATTTAATAATATCA             TC-TGCAA GAA TTGCAAGA             ATCGCGCCCATATAC  44 134
AV939_RS12655 2973915 .. 2973935 -  -3.9  -3.14344   TATTGCGCTGAGTAA            CGGTGTAAC ACT GTTAACCCG            CTCATTCACCAGAAA  48 299
AV939_RS12650 2973065 .. 2973090 - -16.3  -5.71712   TGCCAGATAAAAAAA         TAGGGAGGCAA AATC TTGCCTCCCTA          GTAAATACATATTTT 100 88
AV939_RS12645 2972143 .. 2972158 -  -4.8  -6.10489   AAGTGTAAAAAAAAA              TAAACT ATGC AGTTTA               CATTTGCTCAACAAA 100 23
AV939_RS12640 2970339 .. 2970354 - -11.8  -5.34365   GCATAATAATAAAAA              GCCGGC TTAC GCCGGC               TCTACATGTTTCCTA 100 55
AV939_RS12635 2969177 .. 2969193 -  -3.7  -2.91681   CTTCAACGTTAGAGA              CTAGG TTTATTG CCTAG              TAACTTTTCTAAATG  47 2
AV939_RS12630 NONE
AV939_RS12625 NONE
AV939_RS12620 NONE
AV939_RS12615 2966281 .. 2966293 -  -6.3  -2.58714   CTTCACAGCAATCTA                TTCAC CAT GTGAA                ACCTTGGTTAGGTGC  53 434
AV939_RS12595 2962802 .. 2962817 -  -6.8  -6.09196   CTTAAAACAAAAAAA              CGCCCT GAAG AGGACG               TTTTTGATAGTACTG 100 96
AV939_RS12590 2960397 .. 2960422 - -11.9  -5.22039   GCTAAATGTAAAAAA         CAGGCAAACGC TAAA GCTTTTGCCTG          TTCGATATGTCAGTA 100 73
AV939_RS12585 NONE
AV939_RS12580 2959466 .. 2959482 -    -3  -3.46407   TACTACAAAAAACGA              CAACAA CTACC TTGCTG              AAAAATAGCAACAAT  47 53
AV939_RS12575 2958552 .. 2958568 -  -6.6  -4.35042   GCGACTATAAAAGAA              GAGAGT GCCCT ACTCTC              TTTTTTTGCGCCTAA  73 68
AV939_RS12560 NONE
AV939_RS12555 NONE
AV939_RS12550 2951822 .. 2951841 -    -5  -4.81249   CCTCAAATTGAAAAA            GCCATATT AGAT AAAATGGC             TACACTTCCTGTTCA  75 134
AV939_RS12540 2948852 .. 2948867 -  -6.8  -4.79451   ATTTTAAAGACAAAA              GCGCCT TGTT AAGCGC               CATTGCGGCCAAAGG  80 458
AV939_RS12530 NONE
        fadH 2945448 .. 2945469 - -14.5  -5.99154   CAGCAAATAAAAAAA           GCCTATCCC CGCC GGGATAGGC            CTTTTAGAAGATTAT 100 116
AV939_RS12515 2943717 .. 2943749 - -11.3   -3.1505   ATTACCTTGCATCAA      GGATTCCCCAAACTC GCT GAGTTGAGGGAGTCC      TTGCAAAACCGTGTC  80 88
AV939_RS12510 2942023 .. 2942033 -  -2.4  -4.63928   AGAGGATTGCAAAAA                 CGAG ACA CGCG                 GCCAGTGGTACTATC  64 392
AV939_RS12480 NONE
AV939_RS12475 2935380 .. 2935392 -  -3.5  -3.17392   TATTCTTTAACTTAA                TTTAA ATC TTAAA                AAGCTATTCGACGAT  46 43
AV939_RS12470 2934848 .. 2934865 -  -8.4   -3.5944   ATTGAGAGCGCCAAA             GCGGCA AAGCCA TGCCGC              TTTCAGGCGTAATTT  73 212
AV939_RS12465 NONE
AV939_RS12460 NONE
AV939_RS12455 2932255 .. 2932268 -  -5.9  -3.53444   TTACCGGCCGTTAAA               CGCCC ACCA AGGCG                CAATGCGTTATTCTA  60 33
AV939_RS12440 2927172 .. 2927202 -   -12  -3.42503   TGTGAAGACGGACAA       CTCGATGGGGAA AATAAAG TTCCCCATCAAG       CCTTTAACCAAGTCT  90 79
AV939_RS12430 NONE
AV939_RS12425 NONE
AV939_RS12420 2922788 .. 2922806 -  -8.8  -3.06261   CCTCAAGCGTCAACA             CCACCAAG TGT CATGGTGG             AGATTCGTAGCTAAA  70 397
AV939_RS12415 2918032 .. 2918060 -  -3.1  -2.67228   TCTAAATAGAAAAGC        CGCTAAGTGTAGT CAT ACCGCACTCAACA        TGCAATTAACTGATG  43 31
        truA 2917170 .. 2917198 -  -8.2  -2.77192   AACTGGTCTAAGAAG        TTGAACGGTAAC CCATT GCTACCGTTCAG        AGGCGTTCACGCTTT  66 40
AV939_RS12405 NONE
AV939_RS12400 NONE
AV939_RS12395 2914142 .. 2914152 -  -5.4  -4.95155   TTTACAGCATAAAAA                 GTAC TGT GTAC                 CTATGGGTTTACACT  76 39
AV939_RS12390 2913496 .. 2913507 -  -2.2  -2.53271   CTATTCCGACAATAC                CACA CATG TGCG                 TTACCTATATCAAGC  39 35
AV939_RS12385 2911852 .. 2911869 -  -9.9  -5.22943   AGCAAATCTAAAAAA             GGAGACT AATA AGTCTCC              TTTGAAGTTAGTAAG 100 135
AV939_RS12380 NONE
AV939_RS12375 NONE
AV939_RS12370 NONE
AV939_RS12365 2906604 .. 2906614 -  -5.4  -2.62192   CCTTATGCAACCAAG                 TCTG AAC CAGA                 AAAAATGCTGGCAGC  50 368
AV939_RS12340 2902036 .. 2902052 -  -2.1  -4.77757   CTGTAAAAATTAAAA              TGCAGGG TAA CCGTGCT              GCTAACGACGGCGAC  66 298
AV939_RS12330 2900104 .. 2900129 - -10.5   -4.8083   TAATAGGATGAAAAA         CGTGGCGTA CCGCTTTT TACGCCACG          TTGAATAGATTATTC  91 129
AV939_RS12325 2897448 .. 2897476 -  -5.2  -5.68023   TCAGAAGCAAAAAAA        GGCCGCCTCC TTTTGTTCT GGAGTCAGCC        TACTACTGCTGACTC  93 159
AV939_RS12320 NONE
AV939_RS12315 NONE
AV939_RS12310 2893361 .. 2893390 - -16.6  -2.94466   AATTGATGAAGCACA       GATGATGGCGCT ACTTGA AGCGCCATCATC        TTAGGCTTTTTTTTA 100 175
AV939_RS12300 NONE
AV939_RS12295 2887181 .. 2887191 -  -5.4  -2.59526   CAGAAACTTAAGCTA                 GCTT AAC AAGC                 AATTCAGCTGCTATT  51 389
AV939_RS12250 2875771 .. 2875800 -  -7.1  -2.92091   AGATTCATGTAGATA       CTTTTGGCCAGCT ACCT AGCTGACCGAATG        TCTCTCGATGTGTTT  61 71
AV939_RS12235 NONE
AV939_RS12230 NONE
AV939_RS12225 2871215 .. 2871243 -  -3.9  -5.02074   CTAGTTTTTAAAAAA        CCGGTTCAC AACAACCAAAA ATGAACCGG        TTTACTTTTATCTGA  73 88
AV939_RS12220 2867932 .. 2867950 -  -8.8  -2.65279   TAAGCGTTAAACTTA             GCGGGC TACTAGC GCCCGC             CTAACGCTTTCATTC  67 35
AV939_RS12215 2864738 .. 2864767 - -11.4  -5.29716   TTAAGATAACAAAAA       GCCGGTCGCAGC TTTTGT GATACGACCGGC        TCTGTTTAATTTACA 100 58
AV939_RS12190 NONE
AV939_RS12185 NONE
AV939_RS12180 NONE
AV939_RS12175 2853842 .. 2853870 - -17.6  -3.82191   GTAATTTGATAATAA        GGGCTTAGCTGA TGACG TCAGCTAAGCCC        TTTTTTATGTATTTA 100 188
AV939_RS12150 2846726 .. 2846750 - -14.4    -3.786   CTATAAAATTTGAAA          GCCGTGTTGA TAATC TCAACACGGC          TTTTTTGTTTTTGGG 100 215
AV939_RS12140 NONE
AV939_RS12135 NONE
AV939_RS12130 NONE
AV939_RS12125 2840826 .. 2840837 -  -2.2  -2.93752   AAAATTACAGAATGA                GAGT GATG ACCC                 ATTGTGCACATCGGT  42 143
AV939_RS12090 NONE
AV939_RS12085 2835276 .. 2835303 -    -2  -3.16564   CAACTTAAGGCAAGA        TAAGGAAAAAGC GCAT GCTTTATACTCA         GATGTCTTCGCACGA  43 310
AV939_RS12065 NONE
AV939_RS12060 2827829 .. 2827857 - -16.1  -4.14472   GCAATATCGCTAAAA        CACGGGTTATCTC GAA GCGATAACCCGTG        AACAAGCGTAAGTAG 100 45
AV939_RS12055 2826385 .. 2826395 -  -2.6   -3.5774   ACGTAATTTTCCAAA                 TAAA TTG TTTA                 CCGTTAGCGAGTGGG  49 87
AV939_RS12050 2825285 .. 2825300 -    -4  -4.06182   CCACCCACAAAAATA              TTGACC ATTT AGTCAA               AAAACAGCTTTATAG  59 35
AV939_RS12045 NONE
AV939_RS12040 2822984 .. 2822996 -  -4.7  -3.74077   GGTTAGATACCCAAA                CGCTC ATG GCGCG                CCACCGTGCAGTGGC  58 87
AV939_RS12030 2820430 .. 2820445 -    -4  -3.18383   ACTGGTATGGACTAA              CCATCA GAAG TGATAG               TCTCAATTATCTCGT  48 6
AV939_RS12025 2819369 .. 2819408 - -10.2  -3.97636   ACGCTAAGTCACAAA  CCCTGATGTATCTTTCGTA TTC CACAAAAGAAACATC-GGG  AAGTTATAAACATAG  82 181
AV939_RS12000 2814062 .. 2814099 - -14.9  -4.04141   TAATAACCAACGAAA   TAGCCCCCGCTCGTTGGA CTT TCCAACT-GCGGGGGCTT   TTATTAAAAACACAT 100 54
AV939_RS11990 2809874 .. 2809889 - -10.4  -5.82281   AAACACACAAAAAAA              GCGGCA TTTC TGCCGC               TTTAATTATCAATTT 100 73
AV939_RS11985 2809108 .. 2809132 -  -5.7   -3.9226   AATATAGCGGATAAA          CCAGCAGGC AATCGAA GCCTACTGA          TGCTTTTATTCATGG  63 117
AV939_RS11975 2807667 .. 2807689 -  -5.6  -3.86935   TAATGATGACAAGAA           GCAAGTAACT AAG ACTTACCTGC           TGCTTTCTCTCCCCA  62 11
AV939_RS11970 NONE
AV939_RS11965 2805789 .. 2805806 -  -2.7  -3.59247   TAACAACCGTTTAAA             TCATAAG CCAA CTGATGA              ATAAACACACTAACT  49 68
AV939_RS11960 NONE
AV939_RS11955 2802969 .. 2802988 -  -2.8  -4.11484   TGGAATTTTTGAAAA            GCCGTA ACACTTAA CACGGC             AGCTTTTATTTACCC  55 188
AV939_RS11925 2794536 .. 2794563 - -11.4  -3.45087   ACTAACGCAACAAGA        GCGCTTTTAATG ATGA CATTGAAAGCGC         TTTTTTATTCCCAAA  85 58
AV939_RS11915 2793279 .. 2793313 -  -8.7  -2.87344   CACCTCCTTTAGATA     GTGGTGAAGCGTT AACCTCTCG AACGCTTCATCAC     TACTTCATATGTACT  68 25
AV939_RS11900 2789034 .. 2789055 - -15.9  -5.86976   GTATAAAATAAAAAA           GAGGCTGCC GGAT GGCAGCCTC            TTGCGTCGAATTACA 100 83
AV939_RS11895 NONE
AV939_RS11890 2784054 .. 2784069 - -10.4  -5.63645   TTAAAATATAAAAAA              CCCAGC AGAT GCTGGG               TTTTTATTAAAACGC 100 83
AV939_RS11885 2782494 .. 2782509 -    -4  -3.92075   AGCTTGATTTACAAA              GC-CTTG TGT CAAGAGC              GAGTAAACCAGAGGG  57 474
AV939_RS11860 2773419 .. 2773439 - -11.2  -5.86061   CTTTATTAAAAAAAA            GGCCATCA ATAAA TGATGGCC            AGGACACAACCGCAA 100 61
AV939_RS11855 2772457 .. 2772467 -  -3.2  -4.07687   AGCTTTGGGGCAAAA                 GTCG CTG CAAC                 AGTAATCACCTACCC  57 172
AV939_RS11800 2760048 .. 2760066 -  -3.9  -4.32491   AGGTAAAAATAATAA            TGCCATCT CAAA AGA-GGCA             TGACTCGGTATGGGA  62 113
AV939_RS11760 2753416 .. 2753441 -  -8.3  -5.10877   ATAACAAAGCAAAAA         CTGACGGTGTA TATT TACACTGCCAG          CTTACGTTTTTAGAT  91 68
AV939_RS11755 NONE
AV939_RS11750 2751973 .. 2751988 - -10.4  -4.79756   TACAGAACGTAAAAA              GCCGCT ATAA AGCGGC               TTAATTTTGAAAATG  91 49
AV939_RS11740 2750027 .. 2750043 - -13.7  -5.59879   GACAAACATAAAAAA              GGGGCCA ATT TGGCCCC              TTTCATTTCACTAAT 100 47
AV939_RS11730 2749319 .. 2749348 - -12.2  -2.99834   AAATTACATGATAGA       GAGTTGGCGAGC TTAAAT GCTCGCAAACTC        AGTTGTTGTTGCAGT  87 8
AV939_RS11705 NONE
AV939_RS11700 NONE
AV939_RS11695 NONE
         glk NONE
AV939_RS11685 2738308 .. 2738337 - -14.5  -5.95539   TCTTAAATAAAAAAA       GCCCCGATAATCAG TCA CT-ATTATCGGGGC       TTTTTACTATCTTTT 100 43
AV939_RS11670 2733726 .. 2733745 - -10.7  -3.71607   CTAATATTAGGCAAA            GGCGTGC GTATTT GCACGCC             AACATATTCATTTTA  83 59
AV939_RS11665 NONE
AV939_RS11660 2729262 .. 2729283 -  -5.1  -4.96848   TTTTGCATAGAAAAA           CCCTCACAT TCAG ATGGGAGAG            CATAATACCACCTGT  74 109
AV939_RS11655 2727652 .. 2727677 -  -5.4  -5.72622   GTCATAAAGAAAAAA         GGTGCGCCAA TAGAAC CTAGCACACC          TTTTAAATTGGTACA  95 49
AV939_RS11650 2727088 .. 2727120 -  -9.3  -5.43866   TAAGTGTTAAAAAAA      GAAAAAATCCGCC AAATAAA GGCGGATTTTTTT      ATTTCAAACATCAAG 100 123
AV939_RS11640 2724531 .. 2724562 - -14.7  -4.03234   TTTTGTTTACACAAA      TAAAAAACCGACC CTAGGT GGTCGGTTTTTTA       TTCAAATTGAATATT 100 39
AV939_RS11635 2723245 .. 2723262 -  -6.9    -4.258   GTATTTATTAATAAA             GCCCCGT TGAA AAGGGGC              TTTTTTGTGATGCTA  76 50
AV939_RS11630 2721420 .. 2721433 -  -3.8  -3.60475   AATGCGTATTGCAAA               GCCT ATTCAA AGGC                AGATGAGCATTAATA  53 120
AV939_RS11625 NONE
AV939_RS11620 NONE
AV939_RS11615 2717748 .. 2717761 -  -2.3  -3.35813   TTTCATTTTAAGCAA               CCACC TCTG GGTTG                TTATCCAATACATTC  45 4
AV939_RS11610 2717495 .. 2717517 - -16.4   -4.4891   TTTATCACGAGAAAA           GCTGATGGAC TTT GTCCATCAGC           TTTTTTTATACTTCT 100 31
AV939_RS11595 2716070 .. 2716089 -   -15    -3.224   TAAGTTTTGATAACA            CGACCGCC AAAT GGCGGTCG             TTTTGTTTTAAGCCC 100 63
AV939_RS11545 2706863 .. 2706884 -  -5.1  -3.72181   AAAAAAGAATTAGAA           GAAG-GGCTG TTG CTGCCGCTTC           CAATTGATAGCAACA  59 334
AV939_RS11530 2704927 .. 2704937 -  -2.4  -4.18674   GGTAGATACAAACAA                 CTGG CTA CCGG                 GTGGTAAAAAGCTTG  57 264
AV939_RS11515 2703133 .. 2703155 - -13.5  -3.38134   ACAAAAGCACAGCAA           CGCACTGCT ATAAA AGCAGTGCG           TTGTATTTATTTTCA 100 255
AV939_RS11510 NONE
AV939_RS11505 2701857 .. 2701869 -  -6.3  -3.82665   GATGAGATCATTAAA                TTTGC TGT GCAAA                TTCCTCTGGTTCCAT  64 8
AV939_RS11500 2701484 .. 2701511 -   -10  -4.00532   CGTTGAAACACTAAA        GGCGGC-TTTACT AGA AGTAAAAGCCACC        CTTGCCGATTTAGAA  82 70
AV939_RS11490 NONE
AV939_RS11485 NONE
AV939_RS11480 2693135 .. 2693158 - -15.4  -5.64274   GCACTTACAAAAAAA          GCCGAGCATA ATAA TATGCTCGGC           TTTATCATAATTTAC 100 58
AV939_RS11470 NONE
AV939_RS11465 NONE
AV939_RS11460 2681808 .. 2681822 -  -4.2  -3.84719   ATGGGTAAAGTGAAA               GGCGAT ACT ACCACC               ACACTACCGTCACAA  55 326
AV939_RS11450 2676445 .. 2676461 -  -2.2  -2.62371   ACCTACTGAATTAAT              TGCACT TATTT AGTGCG              CGCAATGCTCAAAAA  40 522
AV939_RS11445 2675068 .. 2675121 -  -6.9  -3.69094   AAGGCATTATTTAAA GCTGGTGATTTTGCTG-CTGTTAAAT CCA ATTAAGCAAACAACAAATCCACCAGC ATTTAGGTTTTGTAT  67 71
AV939_RS11420 2666714 .. 2666739 - -14.1  -4.87037   AATATAGACGAAAAA         GCGGCTAACCT CTTT AGGTTAACCGC          TTTTTATTTATGTTT 100 98
AV939_RS11400 2662122 .. 2662158 -  -5.1  -2.55074   TTGAAGGTTAACCCA    TCGCGTTGCATTTCGTT GTA AAGTGAATGCAACGCGG    TATTTGTACTAACGA  49 34
AV939_RS11305 NONE
AV939_RS11300 2651215 .. 2651234 -  -3.4  -2.87318   AACAAACAAATTAAG            TCGTGCGC CAAG GCGCACTG             GGACGCATACACGCG  44 104
AV939_RS11270 NONE
AV939_RS11265 2643726 .. 2643747 - -15.9  -3.65827   TAATCTGCACTTAAA           GAGGCGACC ACAA GGTCGCCTC            TTTTCTTTGTATCTA 100 41
AV939_RS11250 2640987 .. 2640998 -    -3  -4.84359   CCACGTGGATAAAAA                TGTT ACCC AACA                 ACACTATTATTGTAC  68 508
AV939_RS11235 2638538 .. 2638550 -  -6.3   -3.4247   ATAACCTTAACAATA                TGCTT GAA AAGCA                AGAGACCACATTAGA  60 412
AV939_RS11220 2634470 .. 2634515 -  -3.2  -5.36441   TCTTTACATAAAAAA GCGGCCTATGGGATGCGC ATTTTCATGA ACACTTAACATAGGCCGC TAGGTTTGTTTGGTT  78 55
AV939_RS11215 NONE
AV939_RS11210 NONE
AV939_RS11205 2633617 .. 2633634 - -10.5  -5.72622   TTTAGAAACAAAAAA             CCCCGGC ATAA GCCAGGG              TTATAATGTGGTTGC 100 34
AV939_RS11200 NONE
AV939_RS11195 2628678 .. 2628695 -  -9.8  -5.29716   CTAATACAACAAAAA             GCCCCG GACTAG CGGGGC              TTTTATTAAAATTCT 100 261
AV939_RS11190 2628098 .. 2628115 -  -5.6  -3.06183   TTTAGCCTCACTCAA             GCTTTC GTCGAT GAAAGC              ATTGCTGTTCCGTTA  54 38
        nusA NONE
AV939_RS11180 2623911 .. 2623928 - -14.1  -5.04597   AGTGACAGACAAAAA             CGGGGGC TTGT GCCCCCG              CTTTAATTATACTGA 100 54
AV939_RS11175 NONE
AV939_RS11170 2622350 .. 2622373 -  -2.4  -3.39142   GCCAGACGGAATGAA          GCGCG-TATTA TAA TGACAGCGCGC          GAGTTAGCAAGGGAA  46 51
AV939_RS11165 2621990 .. 2622003 -  -8.1  -5.65177   ACAGGCATAAAAAAA               GCACC CTAG GGTGC                TTTTTTCATTAAAAA 100 48
AV939_RS11160 NONE
AV939_RS11155 2619257 .. 2619267 -  -4.6  -2.58253   ATATAACTCAACCCA                 GGAC AAT GCCC                 GACTCTATTGTAAGT  46 328
AV939_RS11130 2614054 .. 2614066 -  -2.7  -3.01712   TGTTGGGGTTTAACA                GTAAC TGC ATTAC                TTGGGAATTATACTT  43 95
AV939_RS11125 2612126 .. 2612150 - -17.3  -6.22802   GTTTATAAAAAAAAA          GGGGATGGTTT TAT AAACCATCCCC          TTTTTATATGTACTT 100 123
AV939_RS11110 2606938 .. 2606957 - -13.6  -3.04625   GAAATTAATTAGATA            GGGAGTGG AGAC CCACTCCC             ATTACTTACTTATAA  95 67
AV939_RS11105 2605216 .. 2605233 -  -9.9   -5.4251   TCTAGACATAAAAAA             GCTGACA ATGC TGTCAGC              TTTTTAAATTATCAA 100 52
AV939_RS11100 NONE
AV939_RS11095 NONE
AV939_RS11090 2600781 .. 2600821 -   -20  -5.28176   GTTAGGCACAAAAAA  CGCGGCTTTCATTTAGTT ATATA AACTAAGTGAAAGCCGCG  CTGTATTCGTTCACA 100 212
AV939_RS11085 NONE
AV939_RS11080 2598863 .. 2598880 -  -5.5  -4.47307   AAACCAACAGCAAAA             CGCTAGG TTCC CCTATCG              CTAAATACTAGCGGT  69 48
AV939_RS11070 2595740 .. 2595760 -  -2.5  -3.62046   CGACGCTTTCAACAA            CATGCTG TTTTTCG CCGCATG            GCCAATGTGGGCGGC  50 163
AV939_RS11060 NONE
AV939_RS11055 NONE
AV939_RS11050 2589604 .. 2589628 -  -4.1  -3.24245   CGATCCATAAGCTAA          CGCCGTTGCAA GCA TGGCGACGGCT          ATTGCGGTAAATACG  49 182
AV939_RS11045 NONE
AV939_RS11040 NONE
AV939_RS11035 NONE
AV939_RS11030 2585224 .. 2585238 -  -2.1  -3.70139   TAACTCGAACAAATA               CAGTG TTATC CACTA               TGACTTCTCTTTATC  48 23
AV939_RS11025 2584121 .. 2584133 -  -3.4  -5.12172   CAGCAAGAAATAAAA                CAAG ACAAG CTTG                AAAATGCTGTAGATA  74 340
AV939_RS11015 2581804 .. 2581833 -  -2.7  -3.38991   ACCCTTCGAATAACA       GCGGCCTGGTTGA ATAA TCGACCAACTCGC        CCCGTTTTTACCTAA  47 355
AV939_RS11010 NONE
AV939_RS11005 2580257 .. 2580269 -  -3.3  -3.50393   TGCGACGTGATACAA                GGCTA TTA TTGCC                ACCCTCCTCTACAGG  50 81
AV939_RS10980 2574266 .. 2574286 -  -4.1  -3.67976   GTTATTAAGTGCAAA            TGATAATCA CTT TCATTATCA            TGCGCGCATGGTAAT  53 81
AV939_RS10975 2571786 .. 2571797 -  -3.6  -4.67038   TGCGTAAAATTAAAA                GCGG TAAG CCAC                 AGATAATTTGGCGTT  66 8
AV939_RS10970 2571442 .. 2571452 -    -4  -2.66733   TGTGAAGCCATATCA                 TAGA TTT TCTA                 AATGTTGTTTTCACA  45 36
AV939_RS10965 NONE
AV939_RS10960 NONE
AV939_RS10955 NONE
AV939_RS10950 2567123 .. 2567143 -  -2.5  -3.65309   AGAAAATAACAAAAT            CACCAAACA AGC TGTTGAGCG            TCGCTATCAAATAAA  50 155
AV939_RS10940 NONE
AV939_RS10935 NONE
AV939_RS10930 NONE
AV939_RS10925 2558137 .. 2558163 - -17.4  -5.54192   AGCAATTGAAAAAAA         GCCGCAACCAGA ATG TCTGATTGCGGC         TTTGTCTATTGTATT 100 67
AV939_RS10920 2555672 .. 2555713 - -16.9  -2.72227   AACAGCTGCCAATGA GTTAGAATAAAGGGGGTCAG AGT CTG-CCCCCTTTATTTTAAC TAAAACTGGCTCTCA 100 25
AV939_RS10900 2548171 .. 2548206 - -13.4  -3.15544   CGCCAGCTCCACCAA    TTCGCAAAAAGCCCCT TTTT AGGGGCTTTTTGCTAT     CTAGCCCACTATGTT  95 225
AV939_RS10870 2543618 .. 2543644 -    -5  -3.59979   TCCCGTGAGGGGAAA         GCCCCAAAAGCC GAA GGCATCTTGGAC         TTGTGTAAATAACTG  57 518
AV939_RS10850 2540009 .. 2540027 - -13.2  -3.90738   GAAAGAATGATGAAA             CACAGCGT TTA ACGCTGTG             TTTTACTTTTAGCTG 100 45
AV939_RS10840 NONE
AV939_RS10835 2538386 .. 2538423 - -14.3  -3.28522   AACTTACGATAAAAC   GAAACAAAACAGCCAGC TTAT GCTGGCTGTTTTTTTGC    ATTCATAAAAATTTG 100 98
AV939_RS10820 2532754 .. 2532775 - -10.1  -5.69068   TAAAAACATAAAAAA           CGGCATCCC CTAA GGCATGCCG            TTTTAGGTAGGTGTA 100 93
AV939_RS10815 NONE
AV939_RS10810 NONE
AV939_RS10805 2529716 .. 2529726 -  -6.8  -3.66874   TCAACCTTAGCGAAA                 GCGA TGG TCGC                 CATACAATCGTCTTT  65 104
AV939_RS10800 2529418 .. 2529433 -  -3.9  -5.67063   GTTATTACAAAAAAA              CGCCG ATATAA CGACG               GCAAGCCCTATTAGT  83 51
AV939_RS10795 NONE
AV939_RS10780 NONE
AV939_RS10775 NONE
AV939_RS10770 2523836 .. 2523848 -  -5.5  -3.82097   GTGAAACCCACGAAA                CCACC ATT GGTGA                ATTACTGCCCAATGC  61 245
AV939_RS10760 NONE
AV939_RS10755 2520457 .. 2520483 -  -6.7  -3.08996   GATGGCCATTCAATA         TTGCGATTACC CTTAC GATAATCACAA         GATTGACTTTAAGCG  58 313
AV939_RS10745 NONE
AV939_RS10740 2514524 .. 2514545 -    -3  -5.60689   TGAGATAACAAAAAA          GGGCC-G-CT AAAA AGTCAGGCCC           TCTTTGATATTTATA  80 49
        ligA 2512277 .. 2512309 - -14.4  -3.93136   ATACCCACGCAGAAA     CG-AAAAAGGCGCTT TATT AAGCGCCTTTTTACG      TTCCAATGATAAGCA 100 60
AV939_RS10725 NONE
AV939_RS10720 NONE
AV939_RS10715 NONE
AV939_RS10710 NONE
AV939_RS10705 2505032 .. 2505047 -  -2.5   -3.2624   GAAAGAATGTATTAA              CCGTC TTTGGC AACGG               TAAGATTTGTCTTTA  46 139
AV939_RS10700 2504179 .. 2504203 -  -8.5  -5.26918   ACAGTTTAGAAAAAA          CCGGTAAGTCC TAA GGCTTTACCGG          TTTTTTTATGTGTTC 100 94
AV939_RS10690 2500773 .. 2500789 -  -2.3  -3.04652   GCTTTAAAGAATAAT              TAATAGC TCA GTTATTA              TTGGGCTAATAATGC  42 84
AV939_RS10685 2499804 .. 2499817 -  -2.3   -2.5294   GACTGCGCAGAAGAT               GCGGT TGCT ACAGC                CCAAGAAGAGTTCAG  39 475
AV939_RS10670 2498213 .. 2498233 -  -2.6  -3.44325   AGTTTTTAGAACGAA            TAGGTAGA GCAAG TCTACATA            GCGTCGATTTTATCG  47 109
AV939_RS10665 2497052 .. 2497068 -  -2.3  -2.81584   GTTATAAGAAAAAGT              GTTAC AAGAAAA GTAAC              CAGTATCATTCTAAA  41 98
AV939_RS10660 2495406 .. 2495432 - -12.4  -5.80248   TAATACACAAAAAAA         GCGCAGTCAT TACTAAC ATGACTGCGC         TTTATATTTGTTCCA 100 123
AV939_RS10645 NONE
        sdhD NONE
        sdhA NONE
        sdhB 2489483 .. 2489505 -  -7.8  -6.35605   GAATACAAAAAAAAA           TAGCCATC ACATCCG GATGGCTA           TTTAGAGCATTGCTT 100 72
AV939_RS10625 NONE
AV939_RS10620 2484933 .. 2484946 -  -5.9  -4.70583   TTTAGTAAGACAAAA               GCCGC TCGC GCGAC                TTGATTAATTAGACT  77 132
        sucC NONE
AV939_RS10610 2482819 .. 2482835 - -13.7  -5.28778   AGCAGGTACAAAAAA              GCCCGCT TAA AGCGGGC              TTTTAAAATGACTAA 100 52
AV939_RS10605 2479561 .. 2479615 - -10.9  -5.55769   TTTTACAATAAAAAA CCACCTT-TTGCTTCGCCGCCGGAAT TCAT ATTCGAGCGCTGAAACAACAAGGTGG TTAGTATCTATCCTA 100 62
AV939_RS10600 2477723 .. 2477743 - -11.2  -3.17222   TAAATGAGGAATAGA            CCCTCAAG GAAAG CTTGAGGG            GTACATAGAATGGTT  80 191
AV939_RS10595 2474328 .. 2474339 -  -4.4  -3.01791   AGGGTTTCGTTAACA                TGGA TAAC TCCA                 AATTTTTCTTTTTCA  49 101
AV939_RS10590 2469934 .. 2469951 -  -9.1  -5.72254   TTAAAGAATAAAAAA             GCCGTGA AAAT CCACGGC              TTTAGTTTTTTGATT 100 53
AV939_RS10585 NONE
AV939_RS10580 2468025 .. 2468037 -  -3.3  -4.53607   AAAAGCATGACAAAA                GCTCA CCT TGCGC                TCACGCACAATTTCA  64 68
AV939_RS10575 NONE
AV939_RS10570 2464719 .. 2464731 -    -2  -3.53811   TTTACGCGGTTTAAA                TTGA ACACA TCAA                CCCCATGTTAAAATT  46 197
AV939_RS10565 2462756 .. 2462771 -  -3.2  -3.44051   GTTTTACTATGATAA              TTCGCA TTAA TGCGCA               ATATAAACGGTTGCG  49 16
AV939_RS10560 NONE
AV939_RS10555 2459444 .. 2459482 - -11.2  -4.96106   TATAAATAGTAAAAA   GGCGCTTATTATTAGT CAATAAC ACTAGCAATAAGCGCC   TTTTTGTTACGAAGT  93 46
AV939_RS10545 2456249 .. 2456277 - -14.7  -3.60948   CAACAGACCCCCAAA        GAAAAAGCCGCGT AAA ACGCGGCTTTTTA        TGATGAACCTTTGTG 100 126
AV939_RS10535 2452478 .. 2452495 -  -9.1     -6.13   ATATGCAAAAAAAAA             GACCGAC ATAA GTCGGCC              TTTTCATGTTTATGA 100 60
AV939_RS10530 2449659 .. 2449676 - -11.3  -5.20781   TAGTACAAAATAAAA             GGGTCTG TAGT CAGACCC              TCCTTAACGACCTTA 100 99
AV939_RS10525 2448503 .. 2448546 - -11.1  -3.54109   TTAACCTAAGTACAA TCACGCCCGTTCCAAAACGC AGGAA ACGACTTGGAACGGG-GCGA AAAGGTTACGCATAA  83 84
AV939_RS10520 NONE
AV939_RS10515 NONE
AV939_RS10510 2446410 .. 2446429 -  -4.2  -3.44284   CCTGCAGTAATAACA            GCTACTGC CATT GCAGGAAC             ACGACTCTTTTCCCG  53 275
AV939_RS10505 NONE
AV939_RS10500 NONE
AV939_RS10495 2444580 .. 2444616 - -13.3  -3.82946   TTAGGTTAAAGAGAA    TATTAGGAAAGTAGCAA TAT TTGCTACTTTTCCAATA    CAAGATGAAAGTACT 100 12
AV939_RS10480 2441764 .. 2441807 - -15.5  -4.15508   AACGAACGCTGAAAA GCTAATGGCCCCTGCTATC AACGAA GACAACAAGGGCCATTAAC GGTTAGATGTAAGCT 100 132
AV939_RS10470 2438703 .. 2438716 -  -2.3  -3.54951   TATCTTATTACAGAA               CGCTG TTTT CATCG                CTTAGCAAACGCCTA  48 4
AV939_RS10465 2437393 .. 2437424 - -13.8  -3.06009   TAAAACTGTCTAATA      CTGGCGGCG-AGTTT ACC AAACTTCGCCGCCGG      TGTCGTGACTGCTTC  95 112
AV939_RS10460 NONE
AV939_RS10455 2435743 .. 2435773 -  -9.7  -4.72729   TAACCAAAACTAAAA       CATGAAAGGCGCC ACTTA GGCGCCTTTTTTG       TATCCATTCACATGC  91 169
AV939_RS10440 NONE
AV939_RS10435 2431589 .. 2431600 -  -2.2  -3.29958   CCAACAATAGTAAGA                CTGA CATG CCAG                 CAGAACGTACTGCGA  45 255
AV939_RS10430 2430695 .. 2430716 -  -5.8   -5.5762   AGTAAATACAAAAAA           GGGCTACC GCATTG GGTAGCGC            TTTTTATTGTTAGAT  89 98
AV939_RS10420 NONE
AV939_RS10415 2427482 .. 2427498 -  -2.3  -3.01924   CACGCTTTGCTAAGA              TTAGTGA CCG TAACTAA              TAACTAATATTCAAT  42 22
AV939_RS10410 NONE
AV939_RS10405 2425392 .. 2425409 - -11.3  -5.40464   TAGTAGAAATAAAAA             TGCCCGA TTTC TCGGGCA              TTTTTGAACAAATAC 100 88
AV939_RS10385 2421415 .. 2421425 -  -6.8    -4.652   AAACCAGTGCAAAAA                 TGCG GCG CGCA                 CTATATCAAATCAGT  77 55
AV939_RS10380 NONE
AV939_RS10375 2420031 .. 2420047 - -12.3  -5.67063   TTTACTATAAAAAAA              GCGAGCT AAA AGCTCGC              TTTTTTAACATTCAG 100 47
AV939_RS10370 2419119 .. 2419139 -  -3.4  -5.25699   AGCACAGAACAAAAA           GAAC-AACT TCAA AGTTTGTTC            TCTTAACGTATAAAG  75 78
AV939_RS10355 2416888 .. 2416907 -  -6.5   -2.5602   CAACCAGTTAATTCA            TGTTCAG TCCGCT CTGAACA             CGCATTTTGGCAATG  56 162
AV939_RS10300 2409358 .. 2409390 - -15.7  -2.54702   ATACATCTGAAGTGA      CCCCCAATAGTTGGA CTA TCCAATTACTGGGGG      TCTTTTTATGTCCAA 100 55
AV939_RS10295 2408889 .. 2408903 -  -7.8  -3.03124   CCTTATCGGGCAACA               CTGACG CAA CGCCAG               GTTCTACCGTAACGC  62 122
AV939_RS10285 NONE
AV939_RS10280 NONE
AV939_RS10275 NONE
AV939_RS10270 2401519 .. 2401529 -  -3.2  -4.41844   AAAACTGGTACAAAA                 GCAA AGT TCGC                 CTTTCTGTGCTCTGA  62 463
AV939_RS10250 2397227 .. 2397257 - -17.1  -3.69534   GCCAAAATAAGAATA       CAAAAAAGCGCGT TTAAT ACGCGCTTTTTTG       ATGGTGCTATTTAGC 100 56
AV939_RS10230 NONE
AV939_RS10225 2393520 .. 2393542 -  -4.9  -2.57795   TTTACTAGCAAGGCA          GATGCCAACC TGAA GATTGGCA-C           TGTATAAAAAAGAGA  49 93
        flgB NONE
AV939_RS10215 NONE
AV939_RS10210 NONE
AV939_RS10205 2390422 .. 2390438 - -12.3  -5.71712   GTGGATACAAAAAAA              CCGCAAC AAA GTTGCGG              CTTTTTTTAGTTAAA 100 50
AV939_RS10200 NONE
        flgG NONE
AV939_RS10190 NONE
AV939_RS10185 NONE
AV939_RS10180 NONE
AV939_RS10175 NONE
AV939_RS10170 2382235 .. 2382250 -  -7.5  -2.70532   ATGCTGATAAAGCGA              CGGCG ATTGTA CGCCG               AGATGCCGATAGTTT  58 378
AV939_RS10160 2380454 .. 2380473 - -12.2  -6.02919   GCAGAAATAAAAAAA            GGCCGATT AAAA AATCGGCC             TTTTTAAATATAATT 100 113
AV939_RS10155 2378817 .. 2378839 - -11.3  -6.17268   TTAGAATAAAAAAAA           GGCCGAGAC ATTAA ATCTCGGCC           AATCTGCTCACGTTA 100 235
AV939_RS10150 2377427 .. 2377454 -  -9.1  -4.61566   TTTGAAACGACAAAA        CGGGCCCTTGC AAATAA GCAAGCACCCG         TTACATTCCAACTAA  86 57
AV939_RS10145 NONE
AV939_RS10140 NONE
AV939_RS10135 NONE
AV939_RS10130 NONE
AV939_RS10125 NONE
AV939_RS10120 2370287 .. 2370301 -  -2.9  -3.00239   ACGTAAACAGTAAAG               CTTTA TTTTT TAAAG               GGCTAATTCAGACAC  43 20
AV939_RS10115 NONE
AV939_RS10110 NONE
AV939_RS10105 NONE
AV939_RS10100 NONE
AV939_RS10095 NONE
AV939_RS10090 2364305 .. 2364315 -  -3.2  -3.21695   CCATCACGAATTCAA                 CAAC GCC GCTG                 TACTTTCGTAGCTTT  46 3
AV939_RS10085 2363308 .. 2363325 -  -5.6  -3.85698   GCTTTCCCCGACAAA             TCCGTA TCTCTT TACGGA              ACTGGCCTGCACACG  61 298
AV939_RS10075 2361107 .. 2361119 -    -2  -3.72576   CTCTGCGGCAGCAAA                TACT GAATT AGTA                TCAGCACTGCGTGAT  51 130
AV939_RS10020 2350201 .. 2350214 -  -8.1  -5.84381   GTAGCAATAAAAAAA               GCAGG TTTC CCTGC                TTCTTTCGAATAACT 100 57
AV939_RS10015 2348617 .. 2348644 - -12.2  -4.06825   CAAAATAAGATGAAA        GTTTAACGTCAA TTAC CTGACGTTAAAC         TTCTTCCATGCGTTG  95 20
AV939_RS10010 NONE
AV939_RS10005 2345942 .. 2345962 -    -9  -4.64657   CTAAAGCGTTAAAAA            TAAGGGGC TAATC GCCCCTCA            TTACCAAACTAGTTT  86 47
AV939_RS10000 NONE
AV939_RS09995 NONE
AV939_RS09990 2342494 .. 2342516 -  -4.9  -4.23156   ATAGCGAATAAATAA           TGAAGGGTT ATAAG AACTCTTCA           CCGCCTCCGCCGCCC  66 10
AV939_RS09985 NONE
        fliI NONE
AV939_RS09975 2339719 .. 2339733 -  -3.6  -3.52906   TTAGGCGTATAAACA               CATTAA TGA TTAACG               AATTTGCAAAGAGTG  51 140
AV939_RS09970 2337133 .. 2337143 -  -3.2  -3.04322   TCTAATCCGTCAATA                 TCCC ACG AGGA                 ACTCGTATTATCAGG  45 149
        fliL NONE
AV939_RS09960 NONE
AV939_RS09955 2335051 .. 2335071 -  -6.7  -3.81488   CTTGCGTAAATATAA            GGGGCAGCA TTG CGCAACCCC            TTGCTATGTAAGAAG  67 43
AV939_RS09950 NONE
AV939_RS09945 2333867 .. 2333886 -    -5  -4.18934   GAGTATTTCAACAAA            GACTTCTG GTGA CATAAGTC             CTCCTACACACCCAT  63 29
AV939_RS09940 NONE
AV939_RS09935 2332808 .. 2332824 -  -2.9  -2.76453   CTAGAATCTGAATCA              GCCATGT ATC ACCTGAC              TTATTTTCATGGGCA  42 32
AV939_RS09930 2331465 .. 2331475 -  -6.8  -3.37236   AAGGTAACCGGATAA                 CTGC ATT GCAG                 GGAGTCTCTCTATCG  61 232
AV939_RS09925 NONE
AV939_RS09920 NONE
AV939_RS09915 NONE
AV939_RS09910 2326322 .. 2326333 -  -5.8  -2.81208   TTTTATCCAAAATAG                CCTC CAAT GAGG                 GGTTAATTGTTATTA  54 45
AV939_RS09905 NONE
AV939_RS09900 NONE
AV939_RS09895 NONE
AV939_RS09890 NONE
AV939_RS09885 NONE
AV939_RS09880 NONE
AV939_RS09875 2319530 .. 2319552 - -12.8  -5.67283   AACGGAAATAAAAAA           GGCAGATAAC CCA GTTACCTGCC           CTTTAGACGTGTTGG 100 45
AV939_RS09870 2318994 .. 2319005 -  -4.4  -2.98015   GGCAATTACCACACA                GATG TCAA CATC                 TTTACGTCTAGACGT  49 62
AV939_RS09865 NONE
AV939_RS09860 2316944 .. 2316956 -  -2.6  -3.89346   CTCCTAGTGTACAAA                CGGC TCAAG GCCA                GACAAACGCATTTTA  53 1
AV939_RS09855 NONE
AV939_RS09850 2313453 .. 2313477 -  -8.7  -2.52896   TGATGTGTTAACGTA          TAAGCCCTT AGGTGAA AAGGGCTTA          CAGAAAACCTTATAT  63 258
AV939_RS09835 2310837 .. 2310851 -  -4.3     -3.67   TCAACGCGCAAAAGA               GCTTA GCGTG TAAGC               TGCGCTTCTGCGTGA  55 13
AV939_RS09830 2309117 .. 2309136 - -13.6  -6.04378   AAAGCACAAAAAAAA            GGCCCTTC TCGA GAAGGGCC             TTTATTAAATACACT 100 55
AV939_RS09825 NONE
AV939_RS09820 2305409 .. 2305422 -  -4.5  -5.24129   GCGTTTGAGAAAAAA               GCCAA TATG CTGGC                CGAGCAATACAATCA  80 519
AV939_RS09805 2301793 .. 2301818 -  -5.6  -4.12254   TAGCATTATAAATAA         GCCCTTTTATA CCCGT TAT-AAAGGGC         ATAAATGAATTTTAT  65 48
AV939_RS09800 2298906 .. 2298919 -  -3.8  -2.87564   TTACTCCGCCACATA               TCGG CACGAC CCGA                CAGTAGCAACAGTGA  45 91
AV939_RS09795 2298621 .. 2298638 -  -9.1  -5.93252   CCCAAAAACAAAAAA             GGCCAGC ATGA GCTGACC              GATTTTTGTGCAGAG 100 47
AV939_RS09790 2298256 .. 2298282 -    -3  -2.62512   ACGCGCAATAAAACT         TTTGTTGACCGT CAC ACCATCAACGAA         CAATGGCGGAGAGGG  41 29
AV939_RS09785 NONE
AV939_RS09780 2298003 .. 2298034 - -15.4  -4.02424   ATTAATCAGTAGAAA      TAAAAAAACCCACC AAAT GGTGGGTTTTCTTA       TATGGCGCGTGTGGA 100 28
AV939_RS09775 2297282 .. 2297294 -  -4.1  -5.66338   AAACACAACAAAAAA                GCAAT CTA ACTGC                ATAGAAAATCACGAT  83 111
AV939_RS09770 NONE
AV939_RS09765 NONE
AV939_RS09760 2293901 .. 2293923 - -10.6  -5.93252   TGCAAAAACAAAAAA           TGCGGCCT AGTGAAG AGGCCGCA           TTTTAGTTTTTAAAT 100 96
AV939_RS09725 2286386 .. 2286396 -  -3.2  -3.44146   TGCGCTTAGAAGCAA                 GGCA GAC TACC                 TATAATTATTATTCT  49 34
AV939_RS09720 NONE
AV939_RS09715 2285534 .. 2285553 - -12.2   -5.4251   TTTACATACAAAAAA            CCGCTCTT AAAA AAGAGCGG             CTTGCTTTTATCGGG 100 75
        phhA 2284467 .. 2284486 -  -2.2  -4.15932   ACAAAAAGATAACAA            GTTAATTT TGCC AAATTATC             ACCTTGAAAGACTGG  54 118
AV939_RS09705 2282769 .. 2282795 - -14.5  -5.60993   GGTTGTACAAAAAAA         GGCGGCACTTC CTATT GAAGTACCGCC         CTCATTGGTTAAGCA 100 72
AV939_RS09700 2281581 .. 2281596 -  -6.1  -3.60971   AGCGTAATTTGTAAA              GGGCA AGTGCA TGCCC               CTACTCATTAGCTTA  62 53
AV939_RS09695 2280803 .. 2280823 - -12.7  -3.06399   GCCAATCAAACGACA            GTAGGTTTC ATT GAAACCTAC            GCCCTGCTGATTATC  91 64
AV939_RS09685 2279025 .. 2279042 -  -2.7  -4.76213   AGAAAGCGAATAAAA             TACTAAC AGGC GTCAGCA              GTCTTAAGCGCGGGG  65 69
         ffs 2278510 .. 2278522 -  -2.7  -5.29782   CACACCCATAAAAAA                TAACA TCG CGTTA                AAATTTAAATTAGGG  73 407
AV939_RS09670 2277240 .. 2277282 - -15.8  -3.71487   CAGGATATTTAAGAA GTTCCTCATTTGCGACGAAT TAC ATTCGTCGCAAATGCAGAAA TGTCGCATTTTTCGT 100 41
AV939_RS09665 2273962 .. 2273979 - -12.7  -4.87803   TATGCCTAAATAAAA             GCCCAGC ATGA GCTGGGC              TTTTTCATTACTCAA 100 44
AV939_RS09660 2272236 .. 2272248 -  -6.3  -4.11216   TGTGTATTTCTAAAA                TCGTT TAT AACGA                ATTATTATTAGTAAG  68 264
AV939_RS09655 2269305 .. 2269320 - -10.4    -5.252   TACCCTCATAAAAAA              GGCCTC ATAA GAGGCC               TTTGTAAAATGCAAT 100 54
AV939_RS09650 NONE
AV939_RS09645 2267772 .. 2267796 - -10.8  -4.20106   AAACCTGAGGTAAAA         GGAGCTG-CGT AAAA ACGTCAGCTCC          GTTTATTATTCTAAT  88 36
AV939_RS09640 NONE
AV939_RS09635 2264965 .. 2264989 - -10.8  -3.90112   CTCTGTTTAATCAAA          CATCCCAAGC TAATG ACTTGGGATG          ATATCAAATGCAACC  86 10
AV939_RS09625 NONE
AV939_RS09620 NONE
AV939_RS09615 NONE
AV939_RS09610 NONE
AV939_RS09605 NONE
AV939_RS09600 2258668 .. 2258685 - -12.7  -6.36459   TCTAACAAAAAAAAA             GGCCTCC AAAT GGAGGCC              TTTTTATTTATCGAT 100 48
AV939_RS09590 NONE
AV939_RS09585 NONE
AV939_RS09580 NONE
AV939_RS09575 NONE
AV939_RS09570 NONE
AV939_RS09565 2251403 .. 2251417 -  -2.1  -3.17798   CGATAAATTACTTAA               CATTG TATAG CAACG               CGATTAAAAATGGCA  43 148
AV939_RS09560 NONE
AV939_RS09555 NONE
AV939_RS09550 2249556 .. 2249577 -  -5.9   -4.4727   TCAATACCTATAAAA           TGAAAAAGC ATGC GCTATTTCA            CAAAAATGAGAGCGA  72 159
AV939_RS09545 2248166 .. 2248176 -  -2.4  -3.65827   TAATTTGCACGCAAA                 GACC TTG GGAC                 GAAGTGCACTTCATT  49 455
        prfC NONE
AV939_RS09530 2243265 .. 2243284 -   -10  -5.28778   ACGAGGCATAAAAAA            GGCCGACA CGAA TGTCAGCC             TCTTAAAATAGCAAC 100 107
AV939_RS09520 2239113 .. 2239129 -  -9.4  -4.38116   CTTATAAAAAGCAAA              GGCGAG GATTA CTCGCC              TCCTCGCCTGAGCAC  86 51
AV939_RS09510 NONE
AV939_RS09505 2236171 .. 2236184 -  -5.2   -2.8507   AACAAATTAAGAGTA               CGGC GACAAT GCCG                TGTACTTAGTTATAT  50 110
AV939_RS09500 NONE
AV939_RS09495 2234959 .. 2234975 -  -8.7  -3.40134   AAACCAGCTTAAAGA              GCCGACT AAA AATCGGC              CAGAGCGTTTATTTC  74 34
AV939_RS09490 2233713 .. 2233727 -  -3.5  -2.78384   GTTGTTCGGATTACA               GCCCT GATTT AAGGC               TGGCTTCGATAAATT  44 6
AV939_RS09485 2231999 .. 2232024 - -10.5    -5.626   TATGGCACAAAAAAA         GGGTATTGAAG TTCC CCTCAACACCC          TTCTTACAAAACAAG 100 127
AV939_RS09465 NONE
AV939_RS09460 NONE
AV939_RS09455 2223979 .. 2224005 -   -11  -4.49958   ATTTTATCAAACAAA         CCTTGGACAT CCATGTT ATGTCCAAGG         TTCTAATAACTGTGA  90 165
AV939_RS09450 2222735 .. 2222748 -  -6.7  -3.78793   TATAAGTAGCAAGAA               TGTCC GATC GGACA                CTTTTTATTGTCCGT  67 180
AV939_RS09445 NONE
AV939_RS09440 NONE
AV939_RS09435 NONE
AV939_RS09430 NONE
AV939_RS09425 NONE
AV939_RS09420 2215121 .. 2215152 -  -3.2  -4.43173   AAAAATAATTCAAAA      TGACATTGCAAATCA TTC TCATTTGCAATA-CA      TTGTACATGCCTGTT  62 117
AV939_RS09410 NONE
AV939_RS09405 2211939 .. 2211960 -  -9.5  -2.63596   CCGTATGCGATAGCA           CCACAAGTA ATAT TACCTGTGG            TGTATGAAGGGAATA  71 108
AV939_RS09400 NONE
AV939_RS09395 2209580 .. 2209594 -  -7.2  -3.69621   ATGCACAACTTTAAA               GATGAA AGC TTCATC               AGTCAGTTTTTATCA  67 495
AV939_RS09370 2203484 .. 2203500 - -10.8  -5.26875   TTTTTAATCAAAAAA              GCCGGC TAATT GCCGGC              TTTCTAATCTTATTC 100 35
AV939_RS09365 2200615 .. 2200640 - -14.9  -4.07124   TAGCATTTAGAGAAA         TAAAAGGAGGC GAAC GCCTCCTTTTA          CCTGGTTTCCGTTTT 100 40
AV939_RS09360 NONE
AV939_RS09355 2198602 .. 2198613 -  -4.4  -4.20025   AACGGCTAACACAAA                GCAA ATAC TTGC                 CTTGCGCACACTGTT  64 281
AV939_RS09350 2195519 .. 2195531 -  -4.1  -3.77464   AGATTATCGATCAAA                CCATC ATC GATGA                TTCTATGTTTAAAAA  55 159
AV939_RS09340 2194387 .. 2194404 - -12.7  -5.73978   AGTAGAAATAAAAAA             CAGCGCC GAAT GGCGCTG              TTTTAGTATTAGGTA 100 115
AV939_RS09330 2192476 .. 2192491 -  -8.2   -4.7373   TCACTTCACGAAAAA              GCGGCC ATTA AGCCGC               TTTTTCAAATTTGTT  87 70
AV939_RS09315 2190170 .. 2190189 - -10.8  -5.32944   TGCACAATTAAAAAA            GGCTAAGT AGAA ACTTAGCC             TTTTGTCGTTGTATT 100 53
AV939_RS09310 NONE
AV939_RS09305 2187791 .. 2187801 -  -5.4   -4.4448   AAAGCTTCAAAGAAA                 CCTT GAC AAGG                 TTCACTGTGATGGTG  69 230
AV939_RS09300 2186046 .. 2186063 -  -7.7  -3.68036   AATTAGCGCAAAATA             TTGCCGC TTAT GCAGCAA              GTATATATTTAATTG  69 218
AV939_RS09290 2182229 .. 2182256 -  -8.6  -5.18355   TTTAAAAAGTAAAAA        GCCCTA-ATACTA AAA CAGTATGTAGGGC        TTTGATTTTTAGGTT 100 64
AV939_RS09215 2169103 .. 2169117 -  -2.2  -2.50816   CCTTTACTCATTAAT               CAAATA CCT TATTTA               CCTTGCCACCTAGGT  39 35
AV939_RS09210 2166965 .. 2166975 -  -2.4  -3.16534   ATCAACTATATGCAA                 CTGG CGC CCCG                 ATTACAACGACAATT  43 133
AV939_RS09205 2165931 .. 2165950 -   -10  -4.98531   GGGTGAAACGAAAAA            CGCCCTGT TTTC ACAAGGCG             TTTTCATACAGTATT  93 60
AV939_RS09200 2165537 .. 2165552 -  -3.2  -3.95647   TAAAATAACTAATAA              CGCCGT CAAA ACAACG               CCCTTAAAAGAATAA  55 15
AV939_RS09195 2164629 .. 2164639 -  -3.2  -3.63968   GTGTAAATCGTTAAA                 CGTG CCT CACA                 AAATTGTGGATATTA  51 524
AV939_RS09185 NONE
AV939_RS09180 2162710 .. 2162739 - -13.7  -3.60971   ACCTGAACTTTTAAA       TAAAAAACGCGGC TCTT GCCGCGTTTTTTT        TATGAGTTCTATGTA 100 91
AV939_RS09170 2159782 .. 2159799 - -11.3  -4.32491   ATTTAAAAATAATAA             GCCCTGT GGAT ACAGGGC              TTTTTTATTGCTAAA  88 65
AV939_RS09160 2157067 .. 2157095 - -13.3  -2.53382   ACCACTTTCAATTCA        CTTCTTACACCTA AGT TTGGTGTAAGAAG        TGAGTTCAAACCGTC  91 31
AV939_RS09070 NONE
        fadJ NONE
AV939_RS09060 2131367 .. 2131382 -  -5.4  -5.11937   AAGAATTCCAAAAAA              GAGAGC ATAG ACTCTC               TTTTTTTATACCTGA  78 175
AV939_RS09045 2122819 .. 2122835 -  -9.5  -2.54896   TTGTCATTCAAGCCA              GATACAC CAC GTGTATC              GACCTTTTATCGCTA  71 50
AV939_RS09040 2122114 .. 2122128 -  -3.5  -4.98255   TTCCAAGCAGAAAAA               GAACG TATCG CGCTC               GTTGTCGACGAGTAT  72 403
AV939_RS09025 2118500 .. 2118521 -    -8  -6.17669   AAGAAAATAAAAAAA           GCCCCATC TTAAAG GATGAGGC            TTTCAACATAATTAA 100 51
AV939_RS09020 2117738 .. 2117754 -  -2.9  -4.36596   TTTACAATTAACAAA              TTGCACC TCA GATGCTA              CTTGTAAATCGATTA  60 167
AV939_RS09015 NONE
AV939_RS09010 2113279 .. 2113291 -  -4.1  -4.30719   TTGGCTCATAACAAA                CTACC CTG GGTAA                TAGCAGCATCAGCTT  62 3
AV939_RS09005 2112044 .. 2112065 -  -8.7  -4.48583   AACCAATATAATAAA           TAGAGCCGC TAGC GCAGCCCTA            GGGTGATATCGTTAA  84 12
AV939_RS09000 2110992 .. 2111004 -  -6.3  -2.94099   GTCTTCCATGATAGA                TAACG TAC CGTTA                ACCGCAGCGTTATTA  55 379
AV939_RS08970 NONE
AV939_RS08965 2099524 .. 2099542 -  -7.5  -3.54935   TAAATGCGGGTTAAA             TAGGGAT TATGC ATCCCTA             TTTATTATTTATTGG  70 75
        rpsP NONE
        rimM NONE
        trmD NONE
AV939_RS08945 2097398 .. 2097415 - -12.7  -5.29782   TACAGGCACAAAAAA             GCCCGCT AATA AGCGGGC              TCTTTCGAAGTTAAC 100 63
AV939_RS08940 2095707 .. 2095734 -  -2.7  -5.13521   AAACGAGTTAAAAAA        CGCTAAGGTCA ATGTTG TGATTTTAGCG         GGCTGTGCAGGGTTA  73 309
AV939_RS08930 2094495 .. 2094508 -  -3.9  -3.75153   TTGCTTTAAGTTAAA               GAAAA ACGC TTTTC                ATATGACGATCGGTC  55 84
AV939_RS08925 2093177 .. 2093193 -  -2.2  -2.60032   TTGCTGCGAAAAATC              GGCCAT TTAGT ATGTCC              CTCAAATCAAATGGC  40 58
        tyrA NONE
AV939_RS08915 2089356 .. 2089393 -  -4.1  -4.34402   CTCGCTATATTAAAA   TATTGGGCTGCTATCCT AGCG AAGAAATCAGCCCTACA    AAAGTAGCGGCAGCA  64 153
AV939_RS08895 NONE
AV939_RS08890 2084501 .. 2084519 -  -2.4  -3.18118   CTATGGCATAACACA             TCCACC GCTTCAA AGTGGA             AATATACGGCAAATC  43 66
AV939_RS08885 2083897 .. 2083914 -  -2.7  -3.42699   ATGTAGTCATCATAA             TCTCAAA TGTG CCTGAGA              CCATGGAAATGCATG  47 131
AV939_RS08880 2081617 .. 2081652 -  -8.4  -3.92373   CATTGTATCTAGAAA    CAGACACAGTTACACG AAGT CCTGTAATTGTGTCTA     ATAGACTAATAACGC  77 111
AV939_RS08875 2081079 .. 2081091 -  -2.7  -3.72893   CAGCCGTTCACCAAA                TGAAA ATT TCTCA                ATCAGAGTGGTATTC  51 104
AV939_RS08870 NONE
AV939_RS08865 NONE
AV939_RS08860 2077676 .. 2077696 - -12.6  -5.96894   ATCTAAATAAAAAAA            GCTGCCAC ATTCG GTGGCAGC            TTTTACCTAATAAGC 100 69
AV939_RS08845 2074101 .. 2074118 -  -9.1  -3.28712   TCGGGCTTTTTATAA             GCCATCG TTTA CGACGGC              TTTTTTACCGTTGCA  72 16
AV939_RS08840 2073673 .. 2073687 -    -5  -2.59035   ATAACCATTAAGGTA               CGTTTG GTA CAAACA               TTGATACCGCCTCTT  49 3
AV939_RS08835 NONE
AV939_RS08830 NONE
        ruvB 2071261 .. 2071288 -  -6.2  -3.85719   AATAAAAGAAACTAA        GCATGAGCGTAC ATAG GCTTGCTCATGC         AAAAAAACACTTAGT  64 43
AV939_RS08820 NONE
AV939_RS08815 NONE
AV939_RS08810 NONE
AV939_RS08805 NONE
AV939_RS08800 NONE
AV939_RS08795 NONE
AV939_RS08790 2065731 .. 2065747 - -12.3  -5.97575   AAGGGAGAAAAAAAA              CCTCTCG TTA CGAGAGG              TTTTTTCATTATAGA 100 34
AV939_RS08785 NONE
AV939_RS08780 2065202 .. 2065222 -  -6.9    -4.386   GAAGCGGTGAGAAAA            CAAGCTATT GGT ATTAGCTTG            ATTGTATTTCGCTTT  78 48
AV939_RS08775 2064832 .. 2064854 -    -2  -3.23768   CACAGATAAAAGAAT           TTGCCGTAAA GCG TTTACGCGAA           TTGATATGAATTGGT  45 245
AV939_RS08770 2063564 .. 2063590 -  -5.9  -3.70149   CGTATACTAGGTAAA        GCG-AGCGTCTT AATC AAGACGTTGCGC         GAAAAAACACGCTAA  62 77
AV939_RS08765 2063334 .. 2063360 -  -9.5  -5.59879   TACAAACACAAAAAA        GCCCCG-CTCTT GGCA AAGAAACGGGGC         TTTTTTATTTGGCGG 100 35
AV939_RS08755 2061995 .. 2062027 -  -8.5   -3.0438   TACGAAGAACAATCA      GCGCAAACAGAAA GTGATTA TTACCGTTTGCGC      CCTCGAGAATATTTT  66 140
AV939_RS08745 NONE
AV939_RS08740 2058061 .. 2058075 -  -4.2  -5.10029   ACGAAGCTCAAAAAA               GACGGT TGG ACCGTT               GTGACAAGAGATAAG  76 132
AV939_RS08700 2051575 .. 2051585 -  -6.8  -2.73701   CGCCATCAAATGAAT                 GGCA CCT TGCC                 TATTATCGCCTTAAC  55 232
        glpT 2047407 .. 2047418 -    -3  -3.58511   AACTAAATACTACAA                TATC ACGC GATA                 GATAAACGTTATCAC  49 41
AV939_RS08685 2045975 .. 2045985 -  -6.8  -4.77438   ACTGATGAGCAAAAA                 GCCA TGG TGGC                 GAACGCCGCTCCTCA  80 349
AV939_RS08670 2043024 .. 2043045 - -14.5  -2.88677   TAGATAACTATCAGA           GCCCAGCTT TTCT AAGCTGGGC            TTTTTTATGCAGGGC  95 130
AV939_RS08660 NONE
AV939_RS08655 2039641 .. 2039687 -  -6.1  -3.40203   GAAAAAAATAAATTA GCACGTGAGAGTAGGCATAAA ATGGGTG TATACGCCTACT-TCACG-GC TCCACCGCCCATTTT  60 71
AV939_RS08650 2038852 .. 2038871 -  -8.6  -5.86976   CCAGAAAATAAAAAA            CCACAGTA TCTA CACTGTGG             TTTTTTTAAACACGA 100 98
AV939_RS08640 2036609 .. 2036640 -  -5.9  -2.89944   AGAAAAAATAAAAGC     CCCTTGGCG--AGCA TAAC TGCAAACGCCAAGGG      TAAAAGTGCGCAAAA  56 191
AV939_RS08635 NONE
AV939_RS08630 2034824 .. 2034841 - -11.3   -5.4148   GAAAGAATCAAAAAA             GGTGCGT TTAT ACGCACC              TTTTTTATTGATGTT 100 85
AV939_RS08615 2029618 .. 2029630 -  -3.4  -4.24306   CGCAACAAAAAAAAT                GCTT ATTGA AAGC                GGTATGGGCTGGGGT  60 278
AV939_RS08605 2028302 .. 2028312 -  -6.8  -4.55295   CTTGCCACAAATAAA                 CCGA AAT TCGG                 GGGTTGAATAGCAAC  77 154
AV939_RS08570 2017587 .. 2017605 - -14.6  -3.64703   TCTTGTGTATGTAAA             GCCAGCAC CTT GTGCTGGC             TTTTTTGTTACCTTC 100 81
AV939_RS08560 2015027 .. 2015041 -  -2.8  -4.50661   AAGGTACAATCAAAA               CCCATA TAG TATGGC               TTCTTACGGGCCTAC  63 458
AV939_RS08550 NONE
AV939_RS08545 2011105 .. 2011124 -  -3.6  -4.00512   CTTGACAAGAAAACA            GCC-TGCTT CGA AAGCACAGC            CATTTTTAAATCTGC  55 362
AV939_RS08525 2007642 .. 2007663 -  -3.6  -3.17075   CGGGCTTCAAGCCAA           TCGAAGGC CATTAT GCCTCCGC            GGGCTGCTGTTTTTG  48 14
AV939_RS08520 NONE
AV939_RS08515 NONE
AV939_RS08510 2004406 .. 2004426 - -11.3   -2.8655   CTGATGCATACTATA            TACCAACAA AAC TTGTTGGTA            TCACTTCAACACGCT  78 395
AV939_RS08500 NONE
AV939_RS08495 2002537 .. 2002548 -  -2.2  -2.62316   CAAAGTTATAACCGA                GCTC ATCG AAGC                 TGACCTTTTAATAGC  40 16
AV939_RS08490 NONE
AV939_RS08485 2000252 .. 2000276 - -15.9  -5.32699   CGAAACATTAAAAAA          GGGTAAATCGA TAG TCGATTTACCC          TTTTTAGTATGAAGC 100 75
        moaA NONE
AV939_RS08460 1995455 .. 1995467 -  -4.1  -4.22407   GATGAAAACGATAAA                GCAAA AGA TCTGC                TTGATGCTTTAGATA  62 510
AV939_RS08435 NONE
AV939_RS08430 1991351 .. 1991371 - -12.7  -3.17194   ACCGGCCTAACTTAA            CTCAAAAGC TAT GCTTTTGAG            ATTTTTTGTAAGGTG  91 144
AV939_RS08425 1991022 .. 1991032 -  -6.8  -2.55074   TGTAAGGTGAAGCGA                 GCTC TGC GAGC                 TGAGCGACATTATCC  56 187
AV939_RS08420 1990865 .. 1990882 - -11.3  -5.04601   TGTAGAAACGAAAAA             GCCAACC CGAA GGTTGGC              TTAACGATATGGCGT  93 35
AV939_RS08415 1989798 .. 1989816 -   -11  -3.25137   AATGTAAACACGTAA             GCCTCCTC ATC GAGAAGGC             TCAAATATACACCTA  82 70
AV939_RS08410 NONE
AV939_RS08405 1987938 .. 1987962 - -12.3  -5.42259   CTATTCCCAAAAAAA          TTAAGCCTATC TTA GACAGGCTTAA          GGTTTCTGGTAAATC 100 243
AV939_RS08385 NONE
AV939_RS08380 1982739 .. 1982772 - -11.9  -4.15328   AAGTGAAATTAGAAA     TTGGACACACACTCGA ATT TAG-GTGTGTGTCCAA     CATTTTGTAGGTTGG  95 145
AV939_RS08365 1979743 .. 1979756 -  -2.3  -5.00895   CCTATCATACAAAAA               GTGGC TAAC GCCAT                GGATAAAGTTTATCA  69 407
AV939_RS08345 1976686 .. 1976719 - -14.7   -5.4505   TTTGCCAATAAAAAA     GCCTGAGAGAAATGC TAAT GCATTCCTTTCAGGC      TTTTTTGTGTGCGAC 100 194
AV939_RS08305 1968344 .. 1968357 -  -2.3  -3.75332   AGCGGCTAATGGAAA               GTAGC TAAT GCAAC                GCTGGTGGCAGCTAG  50 65
AV939_RS08300 NONE
AV939_RS08295 NONE
AV939_RS08290 NONE
AV939_RS08285 1965237 .. 1965249 - -10.5  -5.75945   ATGTTGCAAAAAAAA                CGGGC AAA GCCCG                TTTTTTCTAATCAAT 100 56
        dkgB 1963156 .. 1963172 -  -4.3  -3.86015   TATGGCGGTGATAAA              CCCAGGC GTT ACCTTGG              GCGATAATGTAGTAG  58 241
AV939_RS08260 NONE
AV939_RS08255 1959512 .. 1959524 -  -6.3  -3.85698   GCGCTTCGCGAGAAA                TATGC AGC GCATA                TTTGTACCATCACCA  64 334
AV939_RS08210 1948421 .. 1948440 -  -6.4  -4.47491   ACACCAACAAAAGAA            GCCGAAAC TCTC ATTCCGGC             TTTCTCCTATCACTA  75 181
AV939_RS08205 1947310 .. 1947321 -  -4.4  -3.96827   AAAATGATGCACAAA                TAGC CCAA GCTA                 TGGAGGCATTACTTT  59 350
AV939_RS08195 NONE
        dnaK 1941164 .. 1941189 - -11.1  -4.03078   TTATTACACGACAAA         GGCGCAACAAG TGAA CCTGATGCGCC          TTAACTGCCAAAGTC  86 77
AV939_RS08185 1939892 .. 1939907 - -10.4  -5.81412   TTTAGGCAAAAAAAA              GCCCTC ATAT GAGGGC               TTTATAATTTTGATA 100 45
AV939_RS08180 1939232 .. 1939254 - -11.3  -4.09321   GAGGTAAGGAAATAA           CAGCGCACG AACTA CATGCGCTG           TGAATAACTAAAACG  86 42
AV939_RS08175 1936368 .. 1936386 -  -3.2  -3.21416   TAGCCGCATCAGTAA             TTTGGT GTTTGTG ACCAAA             AGTACTGGGCTTAAT  46 66
        prpE 1934333 .. 1934353 -  -7.6  -3.59698   GCACTTGATATATAA            GGCTTAGC GTTCA ACTAAGCC            TTTGTGTTTCATTAA  70 8
AV939_RS08160 1932540 .. 1932552 -  -5.5  -5.46698   GTTAAAATTAAAAAA                CACCG CTA CAGTG                TTAGGCTTCTACTTT  83 34
AV939_RS08155 NONE
        carB 1927773 .. 1927790 - -12.7  -5.56264   TTTAAACAGAAAAAA             GTGCGCC TTCC GGCGCAC              TTTTGATTTGGTTCA 100 93
AV939_RS08145 1927218 .. 1927247 - -15.1  -3.73224   GTATTTTGTATTAAA       TCAAACCAGTGGC GAGC GCCACTGGTTTGC        GGTGTATCAGATATA 100 32
AV939_RS08140 NONE
AV939_RS08135 1922902 .. 1922912 -    -4  -4.63932   CACCGGCGAATAAAA                 CTAA ATA TTAG                 CTTTTATTTTCATCG  66 22
AV939_RS08130 1922169 .. 1922180 -  -4.4  -5.27335   TGCTCCAAAGAAAAA                GTGT GGTC ACAC                 AATACAAGTGAGTTC  79 119
AV939_RS08125 1921521 .. 1921544 -  -3.2  -4.88405   AATTTCGAAAGAAAA          TTTCAGCTTGG CGA CCATG-TGAAA          GTGTTAGCTGCTGAT  72 241
AV939_RS08115 1919447 .. 1919461 -    -5  -3.48593   TACGGCGTGACATAA               TTGCTC CTA AAGCAA               AGACAATTTACGCGA  56 73
AV939_RS08110 1917160 .. 1917176 - -10.8  -5.56264   TTGAAACATAAAAAA              CGGCGC TTCAT GCGCCG              TTTTTGTACGTGTAA 100 158
        ubiF 1909582 .. 1909607 - -11.9  -2.97475   GTGTGCATTAGAAAC         CTTCCACAGCA TGGA TGCTGTGGCAG          AGCGCCCATGGATGG  87 380
AV939_RS08070 1907928 .. 1907950 -  -9.1  -5.42259   CTAGGCGTAAAAAAA           CGGCCTATG ATAAA CAAAGGCCG           TTTCTTGTATGCGTA 100 107
AV939_RS08065 1906326 .. 1906368 -  -7.1  -4.00308   AAAAACAAAGCTAAA GCAGTGGCAACTTTTTA AGAAGTTTA TAAATCGTCGCCACTGC TTTTTTATCGCTACG  72 48
        hemA NONE
        prfA NONE
AV939_RS07970 NONE
AV939_RS07965 NONE
AV939_RS07960 NONE
AV939_RS07955 1886649 .. 1886677 - -12.7    -2.924   CAACTCTTTACAAAG        CCTACTTGTTAAA CAA TTTAACAAGTAGA        AACATATTTTTAAAT  91 411
AV939_RS07945 NONE
AV939_RS07940 NONE
AV939_RS07935 NONE
AV939_RS07930 1883284 .. 1883306 - -10.6  -5.51353   TAAAAATAACAAAAA           CACACCTCGT TTC ACGAAGTGCG           TACAATCGTTACTGT 100 14
AV939_RS07925 1880941 .. 1880964 - -13.2   -5.5112   CTTAGTAACAAAAAA          GCCCGTCAGA TAAA TCTAACGGGC           TTTTATATTTTTAAA 100 77
AV939_RS07890 NONE
AV939_RS07885 1870543 .. 1870570 -  -6.2  -5.77677   TAAAATAACAAAAAA        CCGGATGAAAAC GTAT GCAATCATCCGG         AATTTAACTTTTTAG 100 77
AV939_RS07880 1867868 .. 1867916 - -16.4  -3.34646   AAGCGGATAAATATA TCACAACAAAAAGCCCGGAAA-GC TTA GCATTTCCGGGCTTTTT-TTGAGA CTAGTTGAGACTAGT 100 36
AV939_RS07875 1866337 .. 1866356 -  -2.8  -3.19371   ATTCAGCCAAGCGAA            TGCACGTA ATGC CACTTGCA             AACAGGGGGTATTTT  44 43
AV939_RS07870 NONE
AV939_RS07865 1864800 .. 1864817 -  -4.1  -2.80816   GTGCTATTCACGACA             GTGCTAG TCGC CTAGTAC              ACAATTAATCTAGCA  45 59
AV939_RS07860 1864238 .. 1864261 - -10.3  -3.25073   GTTTGAAGATGAAGA          GGACGACTG GTAAAA CAGTCGCCC           TGCTGAAAGGGTATC  79 144
AV939_RS07825 NONE
AV939_RS07820 1859633 .. 1859653 -  -3.9  -4.03413   AGCTGCTTAGATAAA            CTTAAGGCC AAG GGCATGAAG            TTTATGACCCCACCT  59 447
AV939_RS07805 1855768 .. 1855792 -  -3.6  -3.37487   CTATAGTCGCAAATA         TGCTTC-GGCA GAAC TGCCTGAAGGA          CGGCGAGCATAATAG  49 139
AV939_RS07800 1855278 .. 1855289 -  -2.2  -5.55769   TCGCACAACAAAAAA                TGAC TATC GCCA                 TTGTTGATTTAGATT  81 422
AV939_RS07790 1851459 .. 1851480 - -12.3  -4.61747   GCAACAACGACAAAA           TCCGGACAC AGAT GTGCCCGGA            TGAATTAAAAGGAAA 100 45
AV939_RS07785 1849719 .. 1849742 - -12.4  -5.38321   AAATATTATAAAAAA          GCTCGCCGCA TTAC TGCGGTGAGC           TTACTTTTAACAAGA 100 52
AV939_RS07775 1846553 .. 1846574 - -11.5  -3.35522   GAACGGGCTGAAATA           GCGGCGTGG TTTG CCACGACGC            ACGCGAAGAAAGAAA  84 136
AV939_RS07735 NONE
AV939_RS07730 NONE
AV939_RS07725 1836259 .. 1836279 - -14.1  -5.74122   TAGCATATAAAAAAA            CGGTGAAGA TAA TCTTCACCG            TTTTTTGTTTTACTT 100 77
AV939_RS07715 1833562 .. 1833616 -  -9.5  -3.91897   CCGCCCACGCATAAA TGCTATAACAAGCTAAGATACAATG AGCGG CATATCAGCTTAGCTTGTTAAAGCA TGTATGTGATCAATG  81 10
AV939_RS07705 NONE
AV939_RS07700 1829594 .. 1829604 -  -6.8  -2.97779   ATTAAAATCAAGAAG                 CCCT CTA AGGG                 AGAGAGGAGCTACTA  58 133
AV939_RS07695 1827372 .. 1827385 -  -6.7  -2.85361   GCAGCTAAAAACTTA               GAGCT GGAA AGCTC                AGGGGAAGGCTACGC  56 195
AV939_RS07630 NONE
AV939_RS07625 1808973 .. 1808997 -  -2.1  -4.39329   ACTTTATAGAAGAAA          TTCAGCCCATT GCG AGTACGCTGAA          TAGTTACCACTATCA  59 465
        thrS 1804793 .. 1804811 -  -2.4  -4.40237   TAGTATACACGAAAA             CCCTCAAA CTA TTTAATGG             TCTTTTCTGCCACTT  59 15
AV939_RS07600 NONE
AV939_RS07595 NONE
        rplT 1803406 .. 1803440 - -22.4  -3.95621   ACTAAACGCTAGAAA     CGAAAAAAGGCGAGCA TCC TGCTCGCCTTTTTCCG     AAAGAACTTAAACTT 100 54
AV939_RS07575 NONE
AV939_RS07570 NONE
AV939_RS07565 NONE
AV939_RS07560 NONE
AV939_RS07555 1794160 .. 1794173 -  -4.5  -4.32857   GGTGGCAAAGATAAA               CGAGA CCCT TCCCG                CATAGAAAGCAAAAT  66 298
AV939_RS07525 NONE
AV939_RS07520 NONE
AV939_RS07515 NONE
AV939_RS07510 NONE
AV939_RS07505 NONE
AV939_RS07500 1782786 .. 1782806 -  -3.3  -2.83299   TTATTAGATCCAAAC            TAAGCTCGT CTT AAAAGCTTA            TTTTTAAATTGATAC  44 4
AV939_RS07495 NONE
AV939_RS07490 1780762 .. 1780781 -  -7.2  -4.72986   TACCTTTATGAAAAA            GAAGAAGT AGTT ACCTCTTC             CTGATTTTGGAAATA  81 16
AV939_RS07480 1778295 .. 1778320 - -12.7   -5.5112   CTTATTAATAAAAAA         CCCGAAAACTC ATTA AAGTTTTCGGG          TTAGTTTTTTAGTAT 100 50
AV939_RS07460 NONE
        pheT NONE
        ihfA 1767819 .. 1767836 -  -9.1  -5.48063   AGGCAATACAAAAAA             GAGCGAG TTGC CCCGCTC              TTTCATAAGTATTGT 100 54
AV939_RS07445 1766783 .. 1766794 -  -4.4    -3.794   TGGTAAGTGATGAAA                CCAA TAAA TTGG                 CGGTAGCGTTAGTGC  58 387
AV939_RS07430 NONE
AV939_RS07425 1761394 .. 1761419 -  -6.9  -3.15249   TATAGTGCTTACCAA         GCACTACGA TGTACCTG CCGTAGTGC          CTGCTTACTTAAACC  59 215
AV939_RS07400 NONE
AV939_RS07395 1753138 .. 1753153 -  -7.5  -5.64274   GCAGGCACAAAAAAA              CCGCC TGGTTG GGCGG               TTTTTTATGGGTGTT 100 64
AV939_RS07375 1749531 .. 1749546 -  -3.2  -3.19026   GAGTCCAACAGTTAA              GCGC TTGCATCT GCGC               TGAATTCTGCACTTA  46 6
AV939_RS07370 1748554 .. 1748566 -  -7.7   -5.0133   TACCCGCCTAAAAAA                GCAAC GCA GTTGC                ATAACCCAAAGAGTG  87 523
AV939_RS07360 1746539 .. 1746564 - -10.5  -4.06993   TTAGATATCAAATAA         GGGCGTACT GCAAAAAT AGTACGCCC          TTTTTCATTAATAAA  85 33
AV939_RS07350 1744007 .. 1744030 - -15.4  -3.09772   GCAAAGCGGGAAAAG          TAAGGGCTGG TAAA CCAGCCCTTA           ATCAAAACAACATGT 100 61
AV939_RS07345 1742745 .. 1742760 -  -2.4  -4.77036   TTGTACGATCAAAAA              TGGCCC ATCT GGACCT               ACCAAGAACAATTGC  66 399
AV939_RS07335 NONE
AV939_RS07330 1739611 .. 1739624 -  -5.3  -3.73302   TAACACACTGAATAA               CCTAA ACAA TTAGG                CCAATTTTAAATATC  62 494
AV939_RS07325 1738235 .. 1738245 -  -6.8  -4.57482   CGACTGAGAAATAAA                 CTGG GCT CCAG                 AAATGCAATCACAGT  77 71
AV939_RS07320 1735307 .. 1735317 -  -5.4  -3.67141   AGAATGGGACTCAAA                 CCTA TAT TAGG                 GTGGGTGTCCCTCGA  59 250
AV939_RS07280 1725116 .. 1725144 - -17.6  -3.38434   AGAATAATTAGAACA        CAAATGGCACCG GTTTG CGGTGCCATTTG        CTAATAAGTCATGCT 100 65
AV939_RS07275 1723323 .. 1723336 -  -3.1   -3.0976   CCTAAGACGCTAATA               CCTAA GACG CTAGG                CAAGATGTAAAGAGT  46 85
AV939_RS07260 NONE
AV939_RS07255 1715489 .. 1715510 - -10.2  -6.34424   GTTGTAAAAAAAAAA           GGGTAAGC GGATTG GCTTACCC            TTTTTACTTTTGAAA 100 63
AV939_RS07235 1707727 .. 1707742 -  -3.2  -3.28712   GTTCCGGGTTTAGAA              CCGG-GC TTA GCGCCGA              GATTACTGCCCTTGT  48 81
AV939_RS07230 1706558 .. 1706572 -  -3.5  -3.65514   TGCAAAGTAAATTAA               CGAGC ACGCA GCTCA               CTTGGGGTTAAGCCG  51 7
AV939_RS07225 1704990 .. 1705000 -  -5.4  -3.09175   AATTTGTACTGAACA                 CAAC AAC GTTG                 AATAAGCGCTATTTC  54 34
AV939_RS07220 NONE
AV939_RS07215 1699992 .. 1700014 -  -3.4  -2.78216   GATTTTTACGAAGGA           TGCCATCGAA TTA TTCGATTTCA           CTACTATGAAAGCGT  44 151
AV939_RS07210 1699554 .. 1699607 -  -7.5  -5.31877   ATTTAGCATAAAAAA GTGGCGCTAAGGTTTTATTAAGTGT AATT AAACTTAACTCACCGTTAGCGCCAC ATTCTTCGAAAATTC 100 67
AV939_RS07200 1696734 .. 1696755 - -13.1  -4.58663   ATGATTTTTCAAAAA           GAAAAGGCG GCAC CGCCTTTTC            TTTTGTAACGTCAAA 100 79
AV939_RS07190 NONE
AV939_RS07185 1693727 .. 1693740 -  -3.7  -3.35709   TAACGAGAAAAAGTA               CTCCC GGTA GGGCG                ATATAGCGCTATTTA  49 60
AV939_RS07180 1693343 .. 1693353 -  -2.4  -2.80398   TAACCAACTGAACTA                 CCGC TCC GTGG                 CCTTTTAGTTATATC  41 49
AV939_RS07175 NONE
AV939_RS07170 NONE
AV939_RS07165 1692586 .. 1692607 -  -3.7   -3.1894   TAAAATTAAGACATA           TTGTTGTGC GTAT ACACATCAA            AATAGTCGAAAATTT  48 473
AV939_RS07160 1690982 .. 1690993 -  -2.2  -2.71731   GGTATCGCGGAACGA                CTGG CAGG CCAA                 CCGATTAATGGGTTT  40 30
AV939_RS07155 NONE
AV939_RS07150 1688912 .. 1688930 - -13.2  -4.55023   TTGAACATGATAAAA             GGGTTAGC ATT GCTAACCC             TTTTTTAATGCCTGT 100 106
AV939_RS07140 1685175 .. 1685204 - -18.1  -3.62046   TTATTGTTTTAACAA       TAAAAAAGCCGGC TTAC GCCGGCTTTTTTA        TTAATTGAAATGGTA 100 41
AV939_RS07130 NONE
AV939_RS07125 1680135 .. 1680159 -  -9.4  -5.38054   TCCCAGAAAGAAAAA          TGACGTGAAA AAGAA TTTCACGCCA          CTTTATTTCTGTACA 100 55
AV939_RS07115 1677849 .. 1677872 - -12.6  -3.14344   TAGCTTTTTGAGTAA          GTAAACAGTG CCAA CACTGTTTAC           TTACTCTTTAAGTTA  91 46
AV939_RS07085 1670836 .. 1670849 -  -5.3  -3.65827   CAATCGTTATTCAAA               CGTTA GGTG TAACG                CTTTTGAAAAGCGTT  59 96
AV939_RS07075 1669885 .. 1669897 -  -6.3   -3.5393   ACGAGTTGGTTGAAA                TGCTT CCT AAGCA                ATAACGGTTACCGGT  60 92
AV939_RS07065 1667903 .. 1667919 -  -5.1  -4.79949   CCTTTAAAAAAAGAA              GCCAACA GGT TGTCGAC              CCAGCTTTCATCAGC  75 431
AV939_RS07050 1662119 .. 1662162 - -10.6  -2.73508   TAATAAGTAAATTTA CCGAATACCCTAAAAGCCTTA TGA CAACGCTTTTAAGGTATT-GG TTAACGTGGCATCTA  76 0
AV939_RS07045 1661395 .. 1661407 -  -7.7  -3.48276   TGCTTTGCTATAGAA                CGCTA AAC TAGCG                AAGCAAAAATTGCTG  68 20
AV939_RS07035 NONE
        rpmF 1659674 .. 1659697 -  -3.8  -3.31946   TAGCTTAGACAAAAT          GTAGACGCCGT ATT ACG-CGCCGAC          TACTTTATTGCCTTT  49 14
AV939_RS07025 NONE
AV939_RS07020 1657683 .. 1657697 -    -5  -4.48583   AATTAATAGAAGAAA               CTAGTA TCG TACCAG               CGCAGATGCCCACGC  67 11
AV939_RS07015 NONE
        fabG 1655907 .. 1655935 - -12.7  -3.26031   TCCACCCCAAACACA        GTTAAATTCACAA TTT TCGTGAATTTAAC        CCATATACATACCAC  95 21
AV939_RS07005 1655449 .. 1655466 - -11.3   -5.0916   GTGGGAATACAAAAA             CGGCTCT AAAG AGAGCCG              TTTTTTAATTTACTA  93 51
AV939_RS07000 1654111 .. 1654126 - -10.4  -4.56978   TGCGCAAACAAGAAA              GGCAGC TTGC GCTGCC               TTTAATCAATAACTA  89 66
AV939_RS06995 NONE
AV939_RS06990 NONE
AV939_RS06985 NONE
AV939_RS06980 NONE
AV939_RS06975 NONE
AV939_RS06970 1649030 .. 1649049 - -13.6   -5.0925   CGGTAAAATTAAAAA            CGCCAGCA ATTT TGCTGGCG             TTTTTTATTATTTTG 100 126
AV939_RS06950 1642186 .. 1642196 -  -6.8  -2.50994   TTGAACCTTATGAAC                 CCAG TAG CTGG                 TAAGTGTTGTTATGC  56 409
AV939_RS06945 NONE
AV939_RS06940 NONE
AV939_RS06935 NONE
AV939_RS06930 NONE
AV939_RS06925 1638888 .. 1638900 -    -2  -3.87641   AATATCCTTTATAAA                TTCT TTTCG AGAA                AGCAAAAAATGCTAA  52 37
AV939_RS06920 NONE
AV939_RS06915 NONE
AV939_RS06910 1636895 .. 1636909 -  -7.2  -3.87318   AACGATTACATCAAA               TTCGTT CTG AACGAA               AAGCGAATAGCCGCT  70 262
AV939_RS06900 1633532 .. 1633586 -  -8.9  -5.43621   ATAAAGCACAAAAAA GACGCACTAAAAAAGCCGCTTAGATT GAAA AATCTAAGCGGCTTTTT-AATGTTTA GGTTTTTAATAAATA 100 62
AV939_RS06860 1621985 .. 1621997 -  -3.4  -3.57263   AGTCGTATTTTTAAA                CCTA GCGTT TAGG                CTTGCCTAGGCCTGT  51 107
AV939_RS06855 1620642 .. 1620652 -    -4  -2.73441   CACTACCCTTTAAAG                 TTGT TCA ACAA                 TGGCAATTACACCAT  45 9
AV939_RS06850 1619879 .. 1619902 -  -3.8  -4.80959   GAACGCAGAATAAAA          CCACTAAGCC AAAT AGCTTAGCCG           CGCTACTTTTTCGAG  68 258
AV939_RS06845 1617617 .. 1617635 -   -11  -5.60993   TTTTGCATAAAAAAA             CTCGGCAC TTA ATGCCGAG             TTCATATTATTCACG 100 80
AV939_RS06840 1617038 .. 1617052 -  -4.2  -3.18912   TTACTGATTGAGCAA               GGCCAT TTA ATGGAC               CCACCATCGCCCAGC  48 246
AV939_RS06810 NONE
AV939_RS06805 NONE
AV939_RS06800 1611234 .. 1611245 -  -2.2  -3.58208   GTGTAGAAGAAGTAA                CAGA AAAT TCCG                 GTGACTATTATATAT  49 253
AV939_RS06790 NONE
AV939_RS06785 1610032 .. 1610047 -  -3.2  -3.66666   GTTAAAAGTTTCAAA              GACTGA ATCT CCAGCC               TACTAAAGCTATCGT  51 129
AV939_RS06755 NONE
AV939_RS06750 1602053 .. 1602100 -  -4.2    -4.371   GTCACTATATTAAAA GTAAGCTGTAGCCTTGATAGTGT GTC ATACCATCAAGGCTTAGGCTT-C AAACCCGAAGGACAA  64 163
AV939_RS06710 1592448 .. 1592475 - -12.7  -6.10295   TTAATATAAAAAAAA        GCGACCCTGAC TATTTG GTCAGGGGCGC         TTTTACAAATTAGGT 100 72
        clpS NONE
        clpA 1589006 .. 1589029 -  -9.6  -5.82281   AAAGACACAAAAAAA          TGCCACACCT TTTC AGGTGCAGCA           TTTTTAATCGACATC 100 71
AV939_RS06665 1584375 .. 1584385 -  -4.6  -3.33744   CGCTCTGGTAAAAAT                 GCAG GCA CCGC                 GTTTTTGCAACAAAA  52 491
AV939_RS06645 1581324 .. 1581340 - -12.3  -4.58466   TCTATAATGAGAAAA              GACCAGC ATA GCTGGTC              TATTTTAGGGGGCGA 100 42
AV939_RS06640 1580175 .. 1580212 -  -6.4  -4.38154   ATATTGGCGATAAAA   CCAAT-TGGCGCACTAT GTTGA AAAGTGCGCCAGATCAG   GTTGATTTACTTGAG  73 524
AV939_RS06625 1576551 .. 1576567 -  -9.4  -5.73339   ATAAGTATAAAAAAA              GCGGCT TTCAC AGCCGC              TTTTTTATTTGTGTT 100 60
AV939_RS06555 1560607 .. 1560629 -   -15  -2.80074   TTGGCTATAACACGA           GAGAGCATCA CAA TGATGCTCTC           TTTTACGAATAGCCC 100 56
        rrmJ 1558563 .. 1558577 -    -5   -3.9534   ACTTACACTTATAAA               CTTTCG CAA CGAAAA               TCGCTTACTCAAAGC  61 44
        hflB 1556498 .. 1556514 -  -9.4  -5.72622   TGCACAAATAAAAAA              CGCCAG AAATA CTGGCG              TTTTATAAACTTTAA 100 50
        folP NONE
        glmM NONE
AV939_RS06520 NONE
AV939_RS06515 NONE
AV939_RS06510 1552824 .. 1552838 - -11.4  -5.77988   ACAGACACAAAAAAA               CCGGCT AAA AGCCGG               TTTTTAAAGTTGGTG 100 36
AV939_RS06505 1550021 .. 1550057 - -16.1  -2.92157   CATGAACCTTACAGA    TACAAAAAAGGCCAGTC ATA GACTGGCCTTTCTTTTA    ATCTTTGATTTTACT 100 348
AV939_RS06490 1546815 .. 1546855 -  -3.4  -2.83396   TTTAAACCAATATTA GCAGCCGACTCCCTTTAACC GCA GGTTAA-GGGAGTTG-CTAG ATTCATACCTCTCCA  44 98
AV939_RS06480 1544272 .. 1544312 - -14.9  -3.45634   AAATAACACGCATAA  TTTGTTTCCGACTTTGGCC TTA GGCCAAACTCAGAACCAAA  CATTTAAATTGAACA 100 316
AV939_RS06475 NONE
AV939_RS06470 NONE
AV939_RS06465 1540155 .. 1540172 - -11.3   -5.8901   ATAGAAAATAAAAAA             GCGCTGA AAAT TCAGCGC              CTTTATTATGAAGCA 100 144
AV939_RS06460 1538968 .. 1538997 -  -6.4  -3.19157   CACCAAGCCTACTAA       CCCGTGATCATA TTATTC CACGCTCACGGG        GTGGCAAAGATAGCT  57 238
AV939_RS06450 1536106 .. 1536134 - -13.3  -4.56597   TCCTTTCTTTAAAAA        CAAAAAAGGGAGC TAA GCTCCCTTTTCTA        ATTTTCTATATCTGT 100 110
AV939_RS06445 1535767 .. 1535783 - -12.3  -5.18371   CTTTATAAAAGAAAA              CCCAGCT TTT AGCTGGG              TTTATTATTTATTTC 100 34
AV939_RS06425 NONE
AV939_RS06420 1532303 .. 1532320 -  -4.1  -4.14013   TAAAAGCCGTTAAAA             TAGACGC TTAT GTGTCTA              TCAGCAGCAATGACA  59 85
AV939_RS06415 1531501 .. 1531520 - -11.4   -5.1963   TTTAACCAACAAAAA            GGCCGCTA ACAT CAGCGGCC             TTTTTTAACGTTTAC 100 58
AV939_RS06405 1529320 .. 1529333 -  -5.3  -4.14472   GTAACACGCGGAAAA               CTCAA CGCG TTGAG                TGCAGGTGCTGAAAT  63 145
AV939_RS06380 1524881 .. 1524897 -  -2.3  -4.72201   GGTCACAAAAAACAA              TATGG CAAGAAC CCATA              TGGTATTGGCTGTTT  64 157
AV939_RS06365 1521443 .. 1521453 -  -2.4  -4.63527   TCACGAGCGTAAAAA                 CGCC ATT GGTG                 CTCTGGTAAACAGTT  64 472
AV939_RS06345 1517460 .. 1517494 -   -13  -5.93809   TTTTCACAAAAAAAA     GACGGATTAACTTGAT GCA ATCAGGTCAACCCGTC     TTATTTTGTTGTAAT 100 52
AV939_RS06340 1516488 .. 1516507 -  -2.1  -3.30771   TGACAGTGGCTACAA            CCGTACT CGGCCT AGTACCG             CTGGCAATGGGTGCA  45 350
AV939_RS06310 1506772 .. 1506785 -  -2.4  -2.52023   GATGCATAGTAATAT               CCTT AATAAA AAGG                GTGAAATTGTGACGA  39 115
AV939_RS06305 NONE
AV939_RS06300 NONE
AV939_RS06295 1504073 .. 1504105 -  -5.1  -4.28774   TTATTGAAGGTAAAA     GTGTAAGCGAAACAC GTAAA GTGTTTC-CTTAC-C     ATATTAAAATTAGGG  65 188
AV939_RS06280 1500540 .. 1500565 - -16.3   -3.7732   TTTGCATATCAATAA         GGCCCTTCAAT GTAA ATTGAAGGGCC          TTTTTAGTTTGAAGA 100 269
AV939_RS06270 1497695 .. 1497714 - -10.7  -5.15167   TATGAGTAATAAAAA            CGCCGCT TATGTT AGCGGCG             TTTTTGTTGGCGTAT  93 70
AV939_RS06240 NONE
AV939_RS06235 1491623 .. 1491642 -  -7.8  -5.19212   ACGAGCATTAAAAAA            GGCTGCGT TTAA AGGCAGCC             TTTTTTGACTTTGAT 100 54
AV939_RS06225 NONE
AV939_RS06220 1486418 .. 1486443 - -17.7  -5.34381   AAATGCAAACAAAAA         CACCGCATTGG CGAA CCAATGCGGTG          TTTTTATAATCCGTA 100 81
AV939_RS06215 1485704 .. 1485732 -  -9.6  -5.59879   GATAAACATAAAAAA       GCGAAGGTGTCGT TTTA ACGCC-CCTTCGC        TTTTTTGTTCTCTAT 100 220
AV939_RS06200 NONE
AV939_RS06195 NONE
AV939_RS06190 NONE
AV939_RS06185 1478033 .. 1478064 -   -16  -3.53733   TTTACCTCATAAATA      CAAAAGGGCTGCGT GAAA ACGCAGCCCTTTTT       TGATTAGGTGTAGTT 100 117
AV939_RS06170 1475054 .. 1475069 -  -3.2  -2.71712   TGCCGGGTTGTAAAT              CCCTGT TTTG ACACGG               GTGAACGCTCCGTTA  43 43
AV939_RS06165 1473742 .. 1473782 - -13.5  -2.69661   AATTGATAATAACAC  CACTTTTTGTTCGTTACTG CTC CGATGACGAACAAAAAGTG  AAATTGACGTTAAAT  91 57
AV939_RS06160 1472723 .. 1472743 - -16.9  -5.24129   GCCGCGCATAAAAAA            GCCCCGCAT AAT ATGCGGGGC            AATCAAGCACACTCA 100 97
AV939_RS06155 1469970 .. 1469999 - -13.7  -4.07885   TATTCCGGGTTAAAA       TAAAAACGCCCCT GTAT AGGGGCGTTTTTT        TATCTTTATAACCAG 100 51
AV939_RS06145 NONE
AV939_RS06140 1466555 .. 1466583 - -16.2   -5.4833   TTATGTAATAAAAAA        GGCTGTTCGAAT ATATG ATTCGAACAGCC        TGTTGGTATTTGGCT 100 113
AV939_RS06125 NONE
AV939_RS06120 NONE
AV939_RS06115 1461414 .. 1461432 -    -6  -3.27382   GGGCAAGATAATAGA             CGGCAA GCTAAAA TTGCCG             CTCAGTGTTCCATTT  57 469
AV939_RS06070 1451539 .. 1451560 - -10.2  -6.02919   GCAGAAACAAAAAAA           CCGGTGTT ATTTAA AACACCGG            CTTTCATGAATTTGT 100 75
AV939_RS06040 NONE
AV939_RS06035 1443059 .. 1443074 -  -3.2  -5.86061   GGCGATGAAAAAAAA              GCGATT ATAG AAGCGC               AAGAGAAGCTTGAAG 100 207
AV939_RS06010 1438643 .. 1438658 -  -4.7  -4.74801   GAAGCGTACCAAAAA              GCGAA GCGCTT TTCGC               AAATGCACCAAAGTA  73 196
AV939_RS06000 1435950 .. 1435977 -  -8.4  -5.95539   CGTTAAATAAAAAAA        GAAGGCGGTTGT TTAC ACTACCGCCTTT         TTCGTTTCTATTGGC 100 56
AV939_RS05985 NONE
AV939_RS05980 NONE
AV939_RS05975 1431944 .. 1431959 -  -6.1  -5.11836   ACAGGCAAAAGAAAA              GGACC GCAATG GGTCC               TTTTTTCTTTCAATC  80 58
AV939_RS05970 NONE
AV939_RS05965 1430114 .. 1430146 -  -7.1   -3.7398   CTGTAATGGAAAATA     GTCATGGCGTGTTG TTATCT CAAC-CGCTATGAC      GTAGCGGCTCTTGTA  70 218
AV939_RS05940 1422777 .. 1422812 -    -7   -2.8092   TAACAGCTTATTATA    CGGAAAAATTCCTT TATACAAG ATGGAATCTTTCCG     TACATCACAATCCTA  60 193
AV939_RS05935 1422101 .. 1422123 -  -7.6  -2.84051   GTATTGTGAGCAAAG           CGAACCACGC TTT GCGGAGTCCG           GTTGATTGTTTTGTT  62 39
AV939_RS05930 1421267 .. 1421325 - -19.2   -2.5655   TTTACTCAGAGGAAG CGTTAGATATTTATCTACCGCTTCTGAG GCA CGAAGGATCGGTAGATAAATATCTAACG CAGCCCAGATGTGCT 100 250
AV939_RS05925 NONE
AV939_RS05920 1419260 .. 1419281 -  -7.3  -3.95986   GGTAACGTAACTAAA           TAGCAGGCT AAAA AGCCTGTTA            TTTTGCGTCCTTGGT  72 52
AV939_RS05915 NONE
AV939_RS05910 1418153 .. 1418164 -  -7.2  -2.57344   CATGTGGGTCATAAT                GGCG AAGC CGCC                 CCGCATGTATGCGTC  59 173
AV939_RS05905 1417512 .. 1417523 -  -2.2  -2.99142   TTGATTAATAAGAAG                GCAA CTAG CTGC                 GATAACTATTCAATT  42 103
AV939_RS05900 NONE
AV939_RS05895 1415139 .. 1415150 -  -2.2  -4.15106   TACCAACGCCTAAAA                CAGCG GCG CGC-G                TTAGTTCGTCAAGCC  54 78
AV939_RS05890 1414192 .. 1414204 -  -6.2  -2.72558   ATAACGCCGCAATCA                CGCG CTTGT CGCG                TGCATTGCCATGTTA  54 10
AV939_RS05885 1413828 .. 1413851 -  -2.4  -2.64099   CTTTTTCACTACAAT          GTGGACACTT CATC AAATTCCCAC           CATAATTTTTTGTTA  40 49
AV939_RS05880 NONE
AV939_RS05875 1412887 .. 1412903 -  -5.1  -4.65446   AGCATATACATAAAA              CTGGG AATGTCA CCCAG              AGAGAGCCCGACTAA  70 227
AV939_RS05870 1411506 .. 1411520 -  -8.6  -3.75332   AGCGTTGAATCTAAA               TTGCGA GCC TCGCAA               AACTGAATGCCACTT  76 231
AV939_RS05860 1409722 .. 1409735 -  -6.7  -3.66784   CCATTTGCAACATAA               CGCTT CTAC AAGCG                GGCAAAAGCCAACTG  65 90
AV939_RS05855 1409030 .. 1409048 -  -2.4   -2.6006   AACTTAGGCGACAAG             TTATGTTG CAT CGACACAA             GGATAACCAATTTCT  40 7
AV939_RS05850 1408529 .. 1408548 -    -5  -4.08571   TGACAAGACTATAAA            CT-CTCCCC TTA GGGGAACAG            TCAAGGGCTTTTAAT  63 36
AV939_RS05845 1407254 .. 1407271 -  -8.4  -3.56216   AATTAAGCTATATAA             GCCCCT TTCATT AGGGGC              TTTTTTTTGCCATCA  73 248
AV939_RS05835 NONE
AV939_RS05830 1403440 .. 1403465 - -13.5  -4.24963   TAGAACGATGGAAAA         GCGTTAATCTT TCAC AAGATTAACGC          TTTTTATTTACTTAC 100 86
AV939_RS05825 NONE
AV939_RS05820 1400877 .. 1400907 -  -8.2  -4.61747   GCAATAATGATAAAA       CACTCCGCATCGAC GTT GTTGATGTGGGGTG       TATTTCTTCCCCCCC  85 308
AV939_RS05795 1392782 .. 1392807 - -11.9   -4.4727   TCAACACCTATAAAA         TAACAAGCGGC CTAA GCCGCTTGTAA          TAAAGAACACCGATA 100 73
AV939_RS05790 NONE
AV939_RS05785 1390300 .. 1390326 - -12.4  -2.78278   TTAAGTAGAGATAAG         CAATGCCATCGA ACG TTGATGGCATTG         TACATAAGGCTAAAT  86 89
AV939_RS05780 1389552 .. 1389572 -  -3.2  -4.66953   TGAATACCTTAAAAA            CTCACCTT ACTTA AAGGCGCG            AATTGATGATATCCA  64 15
        rpsA 1387739 .. 1387757 - -14.6  -3.63694   AGCTACTGCGAACAA             GGGAGTGC TGG GCACTCCC             ACATATAGCTTATTA 100 38
        ihfB 1387381 .. 1387395 -  -7.1  -5.76633   TTAGATATAAAAAAA               CCGCA ACAAG TGCGG               TTTTTTTTATTTAAG 100 36
AV939_RS05765 1384877 .. 1384895 -  -8.2  -3.43033   CAGCAAGAGATAACA             CCAAAACC CAA GGTTTTAG             TTGAGCTTACGTTAG  71 43
AV939_RS05760 NONE
AV939_RS05755 NONE
AV939_RS05750 1382594 .. 1382638 -  -2.9  -5.34309   ACTAGCAAATAAAAA CGCCCAGTTAGTGGTTAGCAT ATTGA ATGCGTTC-ACTA-CTGGGCG TTTTTTTGTGTGTGC  73 73
AV939_RS05740 1380760 .. 1380773 -  -4.5  -2.97951   CAGCCTATCACAAAT               GCCCA TAAT TGAGC                CATGCTTTCATTACT  49 36
AV939_RS05735 NONE
AV939_RS05730 NONE
AV939_RS05725 NONE
AV939_RS05720 NONE
AV939_RS05715 1373922 .. 1373952 - -15.7  -4.12532   TTCCCCACATACAAA       TAAGCTCGTAGAT TCAAC ATCTACGAGCTTA       TCTTCAGCAACTAAA 100 89
AV939_RS05680 1370099 .. 1370118 - -10.8  -2.86271   TTTCGAGGATAACTA            GAAAGGCT AGCT AGCCTTTC             ATCGAAGGCGGGGGC  78 87
AV939_RS05670 1368095 .. 1368124 -  -3.6  -4.55697   ACCTTTATAAACAAA       GCCAAACTTCGTT TTTAC AGCGAAGTC-GGC       CTTCAGTATATTAAT  66 59
AV939_RS05660 NONE
AV939_RS05655 NONE
AV939_RS05650 1364315 .. 1364342 -  -2.2  -3.53091   ACTTGTTTGCTGAAA        GAACAAAGATT AAGTAAA AATC-TTGTTC        TCTTTGGCTATATTA  47 197
AV939_RS05640 1361690 .. 1361716 -  -7.2  -4.56597   TTTTTTGGCTAAAAA         GCGTGAGACACA ATT TGTGGCACACAC         TTTCGCACCTAAAAG  79 55
AV939_RS05635 NONE
AV939_RS05630 1357081 .. 1357091 -  -5.4   -3.1733   TGCGGGATAAAATTA                 GCTA AAT TAGC                 ACCGTTCATTCGTTT  54 168
AV939_RS05625 NONE
        sirA NONE
        uvrC NONE
AV939_RS05610 NONE
AV939_RS05605 NONE
AV939_RS05600 NONE
AV939_RS05595 1352210 .. 1352223 -  -4.5  -3.54638   ATAATGCGTTGGAAA               GTGCCG AAG CGGC-C               AAAACGTTTGCAGGC  54 217
AV939_RS05570 1348163 .. 1348189 -  -7.3  -2.53911   TTAAGCGCGAATGCA         CGCAAGACAAG GGTTA CTTAACTTGCG         CCTTTGCAAATTCAA  59 12
         tpx 1347558 .. 1347579 -  -7.3  -3.64703   CCCTCTCCATTGAAA           TGCCCAC GTAACGCA GTGGGCA            TTACTGGTTTGAGCT  67 62
AV939_RS05560 1346712 .. 1346726 -  -2.8  -3.29739   CTTAACTTATACGAA               GGTTAA TCT TTCACC               ACTGGATAGGTTGCA  46 13
AV939_RS05555 NONE
AV939_RS05550 1345135 .. 1345155 -  -4.8  -2.96321   CTTAGGAAAATACTA           GCC-CAAAA CTAA TTTTGCGGC            CAAACCAACCAATAA  51 2
AV939_RS05545 NONE
AV939_RS05540 NONE
AV939_RS05535 1342587 .. 1342620 -  -9.7  -3.53012   TTCGCCGCCGCCAAA     TAAAGTCCCTAGAGG CAAC CCTCCAGGAATTTTA      AGTGTGATGAGTAGT  75 221
AV939_RS05470 1330864 .. 1330877 -  -2.3  -2.90615   ACTGGTTTTAAAGTA               GGTTC AGAT GTACC                TGAAATGCTTGAAAG  41 249
AV939_RS05450 1326288 .. 1326310 -  -4.1  -4.03978   AACCCCTCACACAAA           CTAACACGC AGGCA GCCCGTTAG           CATGACTTCCGTAGA  59 203
AV939_RS05440 NONE
AV939_RS05435 1324637 .. 1324651 -  -2.1  -3.81744   ACCCAGAGAAAAAAC               CTGCA TTCAC TACAG               TTGACGAAGCCATTG  51 343
AV939_RS05400 1315011 .. 1315022 -  -4.4  -3.39352   GAAGGCAAAAGCGAA                TGCT GATA AGCA                 ACGCCGCTTTCGAGA  52 364
AV939_RS05390 1314265 .. 1314280 - -10.4  -4.93547   TTAAGCAATGAAAAA              GCCCCA TTTA TGGGGC               TTTTATCGTTTTTGA  93 56
AV939_RS05245 1268733 .. 1268750 - -12.7   -5.4251   TTCAGATATAAAAAA             GGCCGCT TAAC AGCGGCC              TTTTACGTTTAAGTA 100 59
AV939_RS05230 NONE
AV939_RS05225 1263235 .. 1263252 -  -2.7  -4.71223   CTACAATACAGAAAA             GCTAATC AATT GATTAGA              ATTGCTAATGTGGTG  65 108
AV939_RS05220 1261704 .. 1261741 -    -2  -5.34555   TGACAGCATAAAAAA   GGCGATTTGCGGTGTTT TACAT ATAAACCCCAA-TCGCC   TTTTTTGTATCTACT  75 73
AV939_RS05210 NONE
AV939_RS05205 1258818 .. 1258830 -  -7.7  -2.62616   TGACGTGTTACACCA                CTACC AAA GGTAG                CGTATCAATCACTTG  62 53
AV939_RS05195 NONE
AV939_RS05190 1256345 .. 1256360 -  -4.7  -4.08216   TTACCTTGGCGAAAA              TGCAG TTAAAC CTGCA               TTTCAGTCACATTTT  63 15
AV939_RS05185 1254790 .. 1254805 - -10.4   -5.4387   ACAGAAAGCAAAAAA              GGAGCC CTAA GGCTCC               TTTTTAATAATATGA 100 77
AV939_RS05175 1251866 .. 1251878 -  -3.3  -4.29176   ATATTTAATGTAAAA                GAGGC TTG GACTC                AGGCCTTTTAATTTC  60 224
AV939_RS05165 1235717 .. 1235728 -  -4.4  -3.51156   AAATAGCACCAAATA                GGAA TACA TTCC                 GTGATTGCGGTTAAG  53 46
AV939_RS05155 1233658 .. 1233695 - -16.5  -2.90349   GTCTGAAAGTGAAAT   TCTAACGCCAGTATCTG TCGT CAGATACTGGCGTTAAT    CACTCAGCTTTACCA 100 65
AV939_RS05145 1227505 .. 1227517 -  -4.1  -4.08285   GATAAAAAAGCCAAA                CAAGC GGC GCTTA                AGCATTGCGGGTCAA  59 332
AV939_RS05135 1226232 .. 1226256 - -12.1  -4.08767   GTTATTGCCGGAAAA          CCTCGGCGCGT AGA ACGCGCTGAGA          GGAAATTACTGGAAG  95 143
AV939_RS05125 1223000 .. 1223014 -  -5.6  -4.74453   TAATATACGTAAAAA               GCGTCG TCT CTACGC               TACGATAACCACTGG  74 162
AV939_RS05035 1201947 .. 1201982 -  -8.6  -4.16259   ATAGAAGTAGAGAAA    CATATAGCAAT-CAAAC AAC GTTTACACTGCTATATG    TTCAGGTATTCACGA  79 114
AV939_RS05030 NONE
        dapD 1198040 .. 1198068 - -16.9  -4.17491   ATCAAATCTCGAAAA        CAAAAAAGGGCGC TAA GCGCCCTTTTTTA        ATGCAAAACTTTTAA 100 56
AV939_RS05005 NONE
AV939_RS05000 1194690 .. 1194711 - -11.6  -4.30034   AAAATTCCAGGAAAA           GGGGTAGC AGAGAG GCTACCCC            TTTTTTTTTGCGTGA  93 167
AV939_RS04980 NONE
AV939_RS04975 1189333 .. 1189343 -  -6.8  -3.40403   CTGTTCGCATTACAA                 TGCG GTA CGCA                 GGTCAAATTCGAAGA  61 345
AV939_RS04955 1187091 .. 1187102 -  -2.2   -4.2142   AAGAGGCTAAAACAA                GAGC CCAC ACTC                 TTTTTTGCATTAACC  57 320
        queF NONE
AV939_RS04940 NONE
AV939_RS04935 1182618 .. 1182628 -  -2.6  -3.01712   TTTTCTGCGCTAATA                 TAAA CAA TTTA                 CAACGTGTATATAGG  43 150
AV939_RS04930 NONE
AV939_RS04925 1180508 .. 1180518 -  -5.4  -2.63596   GCGTATTTTATACGA                 TAGC GGG GCTA                 AGTTATAGCCATTCG  51 56
AV939_RS04920 1179299 .. 1179315 - -13.7   -5.4492   GACAGATACAAAAAA              GCGGGCT TTA AGCCCGC              TTTATCAATAACGTC 100 50
AV939_RS04915 1178714 .. 1178730 - -10.8  -4.20531   TACAGCTATTTAAAA              GCGCGC TTACG GCGCGC              TTTTTTGTGCGTGTC  88 71
AV939_RS04890 NONE
AV939_RS04885 NONE
AV939_RS04880 NONE
AV939_RS04875 NONE
AV939_RS04870 1169107 .. 1169127 -  -7.7  -4.14764   GTTCAAATAATGAAA            GAGAAAACA GCG TATTTTCTC            CTGTTTACTTGAAAA  75 119
AV939_RS04865 1167220 .. 1167246 - -10.1  -5.30616   GTACTCAAATAAAAA         CCGCCGACACA TATTG TGTAACGGCGG         TTATTGTAGGTGATT 100 125
AV939_RS04860 NONE
AV939_RS04855 1165787 .. 1165824 - -14.3  -4.44461   AAGAAGCTCATAAAA   CAAAAGCCCCTGAACGA AAAT TCGTTGAGGGGCTTTTT    AGATTCAGCTCAGCG 100 81
AV939_RS04800 NONE
AV939_RS04795 1154412 .. 1154428 -  -2.9  -5.38549   GTGAAATAATAAAAA              CGCAAAA TGA CTTAGCG              TTGGAATTCGAACCC  79 107
AV939_RS04765 1146652 .. 1146680 - -12.5  -2.56273   AGTATACGCAAGTTA        GTGTGAGCAGACA ATC TGTTTGCCCACAC        AATCGCTTCTTTTAC  89 77
        pyrG 1144880 .. 1144891 -    -3  -2.76696   TTTTTCCTTAACAAT                TGTT TGGG AACA                 CAACGGGAGAAAGTG  42 56
         eno 1143272 .. 1143293 - -14.5  -4.61284   AACACTAAATTAAAA           TACCCCAGC ACGA GCTGGGGTA            TTTTTTTGTCTTAAA 100 302
AV939_RS04745 1138748 .. 1138759 -  -2.2  -3.14881   GAAGCGCTGGATTAA                CTGC TCTT ACAG                 GGTATCAATTCAAGG  43 98
AV939_RS04735 NONE
AV939_RS04730 NONE
AV939_RS04725 NONE
        leuD 1132471 .. 1132492 - -13.1  -2.68279   TAGTTATTAAAGTTA           GGCGAAGTA GGAG TACTTCGCC            ATTACTACGGGGCAA  91 106
AV939_RS04715 1130773 .. 1130783 -    -4  -3.44552   AGGTGACCAAGAAGA                 CAAT AAA ATTG                 AAGTATCACCAGAGC  52 440
AV939_RS04700 1127596 .. 1127612 -  -5.1  -3.58536   AAATCCATGTTGAAA              GCACCTT TTT AAAGCGC              TATGAGAAACTAATT  57 131
AV939_RS04695 1126103 .. 1126130 - -14.8  -3.72576   TGGCTGCGTAGCAAA        CCCTCCGCCGCA TGGA TGCGGCGGCGGA         GCGTACAGGGATATA 100 113
AV939_RS04690 1125372 .. 1125393 -  -2.9  -3.92075   ATGTGCACGTACAAA           CTTAGCGGA GGAT TACGCAAAG            GTGTTTCTCATCGTT  53 16
AV939_RS04685 1124062 .. 1124087 -  -2.5  -3.61589   TGAATAGCAAAGCAA         CCAGCCTGC GAAATAAA GCAGAGTGG          ATTTGTAACAAGCTA  50 190
AV939_RS04640 1115838 .. 1115858 -  -7.7  -3.52192   TTTAAGTCGAGATAA            TAACCTATC GCC AATAGGTTA            TGCTGTGCACATAGT  68 459
AV939_RS04625 1114447 .. 1114458 -  -5.8  -3.92377   TTTACAAGAAAAAAT                GGTG GCCC CACC                 CTGACTTGAACAGGG  66 13
AV939_RS04615 1112699 .. 1112710 -  -4.4  -3.54424   TTTCATTTGTGTAAA                TGCA AATT TGCA                 TAACAATATGAAATA  53 171
AV939_RS04610 1109382 .. 1109402 - -12.6  -5.51612   ATACAAAAAAGAAAA            GCCAGCTG AATAG CAGCTGGC            TTTATAGATGGGAAC 100 55
AV939_RS04605 1108691 .. 1108704 -  -6.7  -3.85698   CGGCTTTTTTACAAA               CTGCT ACCA AGCAG                TGGCCTAATCAATGG  66 370
AV939_RS04590 NONE
AV939_RS04585 NONE
AV939_RS04580 NONE
AV939_RS04575 NONE
AV939_RS04570 1100560 .. 1100575 - -10.4  -2.93995   GAGAAAGTATTAAAG              GGCACC TTAG GGTGCC               TTTTTCATACAGTGA  77 51
AV939_RS04555 1094359 .. 1094369 -  -2.4   -4.4078   CGGTGGTAATCAAAA                 CAGG TAT CCAG                 CGGGTAAATCAGAAG  59 202
AV939_RS04550 1092705 .. 1092734 - -13.6  -5.09521   GCAATAAACTAAAAA       GCCCAGCAAGGT GAATTT ACCATGCTGGGC        TTTAGCCATAATATT 100 55
AV939_RS04530 1087759 .. 1087772 -  -3.8  -3.92314   TACGAGCAAAAAAAG               GCAC ATCAAA GTGC                AATGACGCAACCCAT  57 93
AV939_RS04510 1079370 .. 1079428 - -13.2  -2.63596   GGGGACGGGATATGA CATGCCGCCATTGTACCTGAATTTCGCC TCT GGCTAAATACAGGTACAACAGCGTTTTG CGCTTTACTACTTTA  91 58
AV939_RS04505 1078688 .. 1078702 - -12.8  -2.73309   GTTTAAGAACAAGAT               GCCCGC ATA GCGGGC               TTTTTTATGCTTGTC  90 90
AV939_RS04485 1074659 .. 1074693 - -10.1  -2.73875   TCTTCCCTAATATTA     TGTTCGTTCATCCAT AGTAA ATGGATGAGCGAGCA     TACTTGTTATATTGC  74 74
AV939_RS04475 1068541 .. 1068556 -  -5.4  -4.19276   TCAAAACGGTTAAAA              GGTC-CC TTT GGCGACC              AAGCTTATTCGGCGG  65 4
AV939_RS04470 1066908 .. 1066951 -   -14  -2.55213   TAGCTAGGCAACTGA GCAGCATGGGTTAAGTGACA TGAA CGTCACTTGAACCATGCTAC TTTGTCACTAACTGC  91 40
AV939_RS04460 1063634 .. 1063665 - -13.8  -5.00765   AATGAAGCACAAAAA      GCGCAGCGGAATCGA CAT TCGATACCG-TGCGC      GTTCAGTTTGATTTA 100 58
AV939_RS04445 NONE
AV939_RS04440 1057540 .. 1057557 -  -7.7   -6.0458   ATAAACGAAAAAAAA             CGACTGA TAAA TCAGCCG              TTTTTTTCTTACTTA 100 142
AV939_RS04435 1056189 .. 1056199 -    -4  -4.59773   CCCCACCCCTAAAAA                 CTAA AGT TTAG                 TGCGAGAAACAGGGT  66 8
AV939_RS04430 NONE
AV939_RS04425 NONE
AV939_RS04420 NONE
AV939_RS04415 1052095 .. 1052113 -  -5.3  -4.46621   GACAATAGAAAAGAA             GCACTTC AAAAA GAAATGC             AGGAACTCGAGTCAT  71 507
AV939_RS04390 1047999 .. 1048043 - -17.5  -2.83899   AATTGCCTATTAAAG CTTGAAAACAAAAAACCGCGT TAA ACGCGGTTTTTCGTTTTTAAA TAACGCGTATTTTTA 100 86
AV939_RS04360 1040256 .. 1040269 -  -6.7  -3.66666   CTTAAAATGGCCAAA               GACTG ACAT CAGTC                AGTGACATTACTGTG  65 104
AV939_RS04355 NONE
AV939_RS04350 1036517 .. 1036534 - -11.3  -4.87318   CGTAAAACGCAAAAA             GGGAGCA TTAA TGCTCCC              TTTTTATTCTTCGCA  93 77
AV939_RS04320 1026992 .. 1027023 -   -16  -4.99134   ATCTGAAATTAAAAA      GGGTCGCTTTACTT TATA AAGTGAAGCGACCC       TTTTTCTGTCTTTAG 100 98
AV939_RS04310 1025448 .. 1025458 -  -6.8  -3.67417   ATATTGAATCGCAAA                 GCGA CGA TCGC                 CGCCATCGAGCAAGT  64 144
AV939_RS04295 1022651 .. 1022667 -  -4.4  -2.65112   AAGTGAGTTATATTA              CTGCAA TTAAT TCGCAG              ATTGACGATCTTGGA  47 15
AV939_RS04290 NONE
AV939_RS04285 1018370 .. 1018394 -  -5.8  -3.54424   TCTGATGTGTGCAAA          TAGGATAGAC GACAA ATCTACCCTA          TTCAAAGTGCGTGTT  60 67
AV939_RS04280 1016090 .. 1016115 -  -6.8  -3.60792   CCGGTAAGGCTGAAA         GGGTGCGGTA AGAGCG CACCGCACAC          CTGGTAACAGGTTGT  64 236
AV939_RS04255 1010470 .. 1010482 -  -3.3  -3.53343   AATCGGGTGTTTAAA                GCCAT TTC AGGGC                AAATGCCAAGTGAAT  50 115
AV939_RS04245 1008165 .. 1008182 - -11.3  -2.79327   CTACGTTATTTAAAG             GCCCTCT ATTT AGAGGGC              TTTTTTGTTTGTGTA  78 89
AV939_RS04230 NONE
AV939_RS04225 1004005 .. 1004022 - -12.7  -5.64274   TTACGCATAAAAAAA             CAGCGCC TCTG GGCGCTG              TTTTATGTACAAGTT 100 49
AV939_RS04220 1002632 .. 1002661 - -11.6  -5.71712   GCTTATAGAAAAAAA       GGCGCC-TATGAT GGTTT ATCATAAGGCGCC       TTTTTTGTGTTTGTG 100 85
AV939_RS04180 NONE
AV939_RS04175 NONE
AV939_RS04170 NONE
AV939_RS04165  994320 ..  994348 -  -2.3  -2.65815   GCTATAGCCACAGTA        GCGAATAGGCTAA CAG CTAGGCTGGTCGC        TAATGCTTTAGTGGC  40 33
AV939_RS04160 NONE
AV939_RS04155  993091 ..  993122 -    -6  -3.17699   TAAAACTGAAAATGA      CAATTC-GGTTACAG TAA CTATAGCCTGAATTG      TTCTCCTAGGTATAC  57 11
AV939_RS04150  991544 ..  991558 -  -5.7   -2.5934   CCTTAAATTATCAAG               GCCTT TAGAT AAGGC               TTTTGCGTTGGTTTG  51 15
AV939_RS04145 NONE
AV939_RS04140 NONE
AV939_RS04135 NONE
AV939_RS04130  989507 ..  989541 -   -10  -2.89981   TATAACGATAGGATA     TCGCACTTGCCATGAC GCT GTCATGACAAAAGCGC     AGCGGGGACAGACAA  75 108
AV939_RS04125  987661 ..  987672 -    -3  -3.44051   CCCGCAGTACGATAA                TAAG CACA CTTA                 CATCTATAACGCGTC  48 460
AV939_RS04045 NONE
AV939_RS04040  969660 ..  969672 -  -4.1  -4.30014   GGCAGCAAGCGAAAA                TCAGC ACT GCTAA                GTCATAACGCTTTAT  62 66
AV939_RS03980 NONE
AV939_RS03975 NONE
AV939_RS03970 NONE
AV939_RS03965 NONE
AV939_RS03960 NONE
AV939_RS03955  951085 ..  951098 -  -5.3   -3.0449   AGTTAACAAGTAAAG               CACAA GAAT TTGTG                ATTTAGTAGTTTGCT  53 57
AV939_RS03950  948784 ..  948803 - -12.2   -5.4251   TTCACAGACAAAAAA            GGGAAGGT GTTA ACCTTCCC             TTTTTCATTTAAAGC 100 101
AV939_RS03915  937454 ..  937465 -  -4.4   -2.6621   ATTATAGCTAAACAT                TCAC CTCA GTGA                 TGGTTGCTGACAGTT  47 131
AV939_RS03910  935715 ..  935744 -  -7.4  -4.49958   ATTGCAGCAAACAAA       TCAGGTTATT-CT TTGGT AGCAATAACCTGA       TTTTATTCACATTAA  78 63
AV939_RS03905 NONE
AV939_RS03900  931200 ..  931217 -    -7  -3.96216   GCGTCATTCAAACAA             GCCCTA GGGAGT TAGGGC              TTCAAGCATAAGGAC  72 41
AV939_RS03895  930332 ..  930361 -  -5.6  -4.77567   ATCGCGATAACAAAA       CGCCGTAGGCATC TAAAC GA-GCCGGCGGCG       TTTTTGTTTGTGTTG  74 77
AV939_RS03830 NONE
AV939_RS03825  911153 ..  911185 - -17.9  -4.96468   CAAAGTTAAACAAAA      TGTTGAGCAATACCC ATG GGGCACTGCTCAACA      CGTATTAATTTCACG 100 56
AV939_RS03815  909158 ..  909175 - -11.3  -3.69323   GCATGACTACCTAAA             GCCGAAC TTAT GTTCGGC              TTTTTTGTTTGTTAC  83 15
AV939_RS03805  906114 ..  906146 - -12.2  -3.66018   CGATGAGTTTAATAA      CCAGTTAGTTGC TTAACACGG GCAACTAACTGG      CTTAGTTTTTATTGA  90 63
AV939_RS03780  902703 ..  902713 -  -3.2  -3.75897   AACGGCCAATTTAAA                 GTAC TGA GCAC                 TGCAGAGCGCAATAA  53 376
        rpsU  899973 ..  900005 - -12.2  -3.85698   TCTGTGGCCCAGAAA     CGCGAAAGGTGTTGC AAAT GCAACACCTTTCA-G      ACTCGTAAGTTAACC  90 46
AV939_RS03760  899158 ..  899185 - -14.2  -3.36237   GTAAATAATGAAAAC        GCCAGGTTTGCG ATTA CACAAACCCGGC         TAATTCTATTTCTAC 100 61
        dnaG  897104 ..  897120 -  -4.4  -3.83998   TCACGTCATATTAAA             CGGTGCA CACC TGC-CCG              GGTTTGGTTCTGCCC  57 203
AV939_RS03750  895092 ..  895111 -  -9.3  -6.09196   CTCAAAATAAAAAAA            TCCCCTG ACGAAG CAGGGGA             TTTTTAATTTTTTAT 100 61
AV939_RS03720  886096 ..  886112 -  -6.5  -2.85581   AAACATGAAGATAAT              GATGGCA TAA TGCCTTC              TGATAACAGCGGGTA  57 84
AV939_RS03715 NONE
AV939_RS03710  883997 ..  884022 -  -2.5  -2.78508   TATCCTTGAAAACAG         GCGGGGCAA AAGAATCA TTGCCCCAA          TCTAAGCGCTTCGTT  42 39
AV939_RS03705 NONE
AV939_RS03700  882241 ..  882252 -  -2.2  -4.17296   GCCTAGATATATAAA                CGAC TAAT GTCA                 GCCATTATTTTAAGC  54 109
AV939_RS03685  878581 ..  878596 - -10.4  -4.93661   ATATGAATAAGAAAA              CCGCCT ATAC AGGCGG               TTTTTTAGTTTAACT  93 48
AV939_RS03670 NONE
AV939_RS03665  874399 ..  874413 -    -7  -2.52543   ACTGCCGTGAAGCTA               GGCCGG TAT CCGGGC               TCACTCACCAATACT  59 254
AV939_RS03660  872331 ..  872359 - -10.4  -2.76162   TATCTGAGGGGAAAG        TTTCGCTTCTTC GTAAA GAAGAAGCGAAT        AAAGTGTCACTATTT  76 67
AV939_RS03655  871488 ..  871516 - -15.3  -4.80167   TATTAAAAATGAAAA        TGGGCCTTAGCGA TAA CCGCTACGGCCCA        TTTAAGTCTGTACTG 100 80
AV939_RS03650  870776 ..  870803 - -17.2  -5.30686   AAGACTTATAAAAAA        GGTGCTAGAGAA CAGA TTCTCTAGCACC         TTTTTTGTCGCTTAT 100 70
AV939_RS03590  853584 ..  853615 -    -6  -2.57132   TTTGTGCTCGATAAC      GGTGCAA-GTTAAAA TGA TCTTAGCCTTGCACC      TAGCTTAATATTCGA  54 54
AV939_RS03585  851834 ..  851850 -    -3  -4.85782   GGGTGGAAAAAGAAA             CCTG-TG TCGC CATCAGG              CTTTGCCCAAATGAG  68 197
AV939_RS03560 NONE
AV939_RS03555  847531 ..  847542 -  -7.2  -2.57564   GGATCGCGTTAGAAG                CCGC TAAA GCGG                 TTATGGATTGGGTGG  57 207
AV939_RS03525  840583 ..  840597 -  -2.1   -5.0133   TAGCCTCTTAAAAAA               TGCCT AAAAA AGACA               GCTCGTGAAAGTCGC  66 349
AV939_RS03515  839872 ..  839883 -  -3.6  -4.26079   CGAAAGTACGCAAAA                CGCG GTGG CACG                 AATTCAATCGGACAA  60 365
        tolC  825067 ..  825088 - -15.9  -3.94409   GACATCATTTACAAA           GAAGGCGGC TAAT GCCGCCTTC            TTTAATAACGCTGGT 100 80
AV939_RS03460  823863 ..  823875 -  -6.3  -4.61633   AGAGAGTTTGAAAAA                GAAGT ATC ACTTC                AGCGTATAGTAACGC  78 228
AV939_RS03450  819049 ..  819074 -  -6.2  -6.11644   GCACGTAAAAAAAAA         GAACTAACGC TATTTT GCGCTAATTC          TTTTTAATTAGAAAC 100 104
AV939_RS03445  817654 ..  817666 -  -4.8  -3.76968   AAGTTAGTCACCAAA                CCAG TTTAG CTGG                TTATGCAAACTTACT  60 1
AV939_RS03440  816138 ..  816151 -  -4.5  -4.43844   GCACGAGCGACAAAA               CGTGG CTTA CCACA                AAGATTATGCTGATA  66 342
AV939_RS03425 NONE
AV939_RS03420  808250 ..  808297 -  -6.4  -3.38326   TACAAGCTTAATGAA CACCGGTTG-ATAGCGACAGGTT TTT AACCTGTCGCTATACGATAAATG ACTTATCAGCGGTTA  63 31
AV939_RS03385 NONE
AV939_RS03380  791301 ..  791324 - -13.2  -5.63517   CCTGTAAACAAAAAA          GGAGCCCCAGT GAC AC-GGGGCTCC          AAAGGCCAACGGATT 100 39
AV939_RS03375  789737 ..  789753 -    -3  -3.03159   TGAATTCGTTTAATA              GCCAAT GATGG ATTAGC              TTGCCTAATATACAT  43 30
AV939_RS03370  788687 ..  788701 -  -4.2  -3.83026   GCTGCTGACAGTAAA               GTGAGC ATC GCTAAC               GCTGTATTTACTATG  57 103
AV939_RS03365  786941 ..  786970 - -13.7  -3.87994   AGTTAGCCCCATAAA       CGGTGCCGAGATAC AAG ATA-CTCGGCACCG       TTTATGGGGCTTAAT 100 73
AV939_RS03360  784345 ..  784362 - -11.3   -5.9663   AAATAGCAAAAAAAA             CGGCAAG GTAA CTTGCCG              TTGTAGATAACCATA 100 60
AV939_RS03345  778638 ..  778680 - -15.2   -3.5365   TCAAAGGGTAGAGAA GTGTCATTACATAAAGCGAA GCA CTCACTTTATGTAATGACAT GAAAAGTAAAATTAA 100 37
AV939_RS03335  774868 ..  774878 -  -6.8  -2.56914   GATTTTACGAACTGA                 GCCA AGT TGGC                 AAACATTTTCAGAGA  55 342
AV939_RS03325  773327 ..  773351 - -11.6  -3.06302   ATTACGGGGAGTTAA          GCAAACGTTT TAAGT AAACGTTTGC          TTATCACTTTGTTAG  83 97
AV939_RS03270 NONE
AV939_RS03265 NONE
AV939_RS03260 NONE
AV939_RS03255  756617 ..  756647 - -14.2  -3.35046   TTATGGCGGGAAAGA       CTCCCTATCTAGAT GAA ATCCAGATAGGAAG       GGTTGGTAGCTAAGT 100 68
AV939_RS03250  754600 ..  754629 - -13.7  -3.93782   GTACGTAATACCAAA       CAACGACTGCATT GTTC ATTGCAGTCGTTG        TTTAACCAGCACTTT 100 79
AV939_RS03245  753669 ..  753681 -  -6.3  -4.21744   AGGTAAGAAAGGAAA                CCATT TTT AATGG                CCGCTAAATGATTTG  70 102
AV939_RS03240  750414 ..  750448 - -15.8  -2.77013   TAGCTTGCTAATAAT     GGTTTGCCTTGGGGGA ATT TCCCCCAAGGCAAAAT     TATTGATAAGCGTAG 100 94
AV939_RS03230 NONE
AV939_RS03225  745004 ..  745037 -  -2.3   -2.8082   CAGGTAGCTAAGAAG     CGCCCCAAAGTCT CAATCTAT AGATAGTGGGGCG      GGGGAGTAATGGGCA  41 4
AV939_RS03220  743930 ..  743962 -  -5.8  -3.81447   TATAGTTCAGAACAA     TCAGTGATACCTTGTG AAA CACAAGGCA-CA-TGA     GATAGATTACTGTTT  64 77
AV939_RS03215 NONE
AV939_RS03210  742003 ..  742018 -  -2.6  -2.81966   TGAAAGCTTATTATA              TGGC-TA ATT TAGGCCA              TCCTTTTACGAACTC  42 105
AV939_RS03205  739191 ..  739208 -  -4.1  -3.52177   CTTTAAAAAAGTGAA             TGATACC TATG GGCACCA              AGCCGGTGATAAAGT  52 483
AV939_RS03165  731347 ..  731357 -  -3.2  -3.98083   TATTTAATCTACAAA                 GCCA TGC TAGC                 TAAAGGCATTATAAA  55 21
AV939_RS03150  727837 ..  727858 - -13.1  -4.23758   AGGCTAGATTTAAAA           TAAGCGGCT AAGA AGCCGCTTA            TTTTGTTTAACCTCG 100 76
AV939_RS03115  713695 ..  713744 -  -9.7   -3.5393   ATCACTCCTTGTAAA CGACG-TTTAG-CTGGTTATCTA ACGATG TAGATAACCAGTCTAAAGCACCG CTTTAAATACTTCCA  79 99
AV939_RS03110  711893 ..  711908 - -10.4  -4.88222   AGGAAAATTCAAAAA              GGGCAG TAAA CTGCCC               TCCACGTTATTACCT  93 76
AV939_RS03105 NONE
AV939_RS03100 NONE
        ispF NONE
AV939_RS03090 NONE
AV939_RS03085 NONE
         pcm  707867 ..  707880 -  -2.4   -3.4082   CAAACAATTTCACAA               TAGC TCTCCT GCTA                CTAAGGGAACAAAAC  46 6
AV939_RS03075  707275 ..  707285 -  -3.2   -2.8001   AGAAGCGGTATGACA                 TCGC TGC GCAA                 TTATCGCAAGATGAG  44 26
AV939_RS03070  706284 ..  706297 -  -2.4  -3.25823   CGGCTGGCATATCAA               TGAC GTTTAA GTCA                TCTTTCGTATTTGAT  45 140
AV939_RS03065  705299 ..  705324 -  -7.6  -5.38054   TGCTACAAATAAAAA         TGCCGAGGACA AACAA CG-CCTCGGCA         TTTAACGTATGTAAC 100 47
AV939_RS03055 NONE
AV939_RS03050 NONE
AV939_RS03045 NONE
AV939_RS03040 NONE
AV939_RS03035  702505 ..  702528 -   -14  -4.49937   TGAACAACATTAAAA          CCGCTAGTTT GCTA AAACTAGCGG           TTTTTTGTTAAAAGC 100 19
AV939_RS03015 NONE
        fadB  691717 ..  691727 -    -4  -3.23899   TGGGAATTAAGCGAA                 GTAA GAT TTAC                 CTTCAGCGGCCATCT  49 6
        fadA  690488 ..  690501 -  -9.5   -5.5604   CCAATCAACAAAAAA               GGGCC CGAA GGCCC                TTTTAATAAAACGTG 100 50
AV939_RS02945  682600 ..  682623 -  -2.4  -3.19634   AGCCTAAACACAAAG          CGCGTTACTT GTTA AATTAAAGCG           GCCAATCAATAGCGG  43 18
AV939_RS02940 NONE
AV939_RS02935  680784 ..  680801 -  -2.6  -4.58303   TGAAAGACTATAAAA             CCCTGT TTACTG ACTGGG              GCGGTATGGTGGAAT  63 311
AV939_RS02920 NONE
        moaC  677568 ..  677582 -  -2.8  -3.15544   GTTGATTCCTATGAA               GGTAAA TTA CTCACC               TAATGGGTTCTTGTC  44 17
AV939_RS02910 NONE
AV939_RS02905 NONE
AV939_RS02900 NONE
AV939_RS02895 NONE
AV939_RS02890  673562 ..  673597 -  -4.2  -5.38047   TATTTAGACAAAAAA    GACATTGAAGATAA-AT ACA ATATTAACTTCAATGGC    TATTTCTGTATTGAA  83 354
AV939_RS02880  671326 ..  671341 -  -3.3   -2.6162   GAAGCCGTTAAATAT              TGTTG GTTTTT CAACA               CCTACTAAATGAATA  43 69
AV939_RS02875 NONE
AV939_RS02870  669273 ..  669300 -  -7.1  -2.74012   GGATGATTCGAACGA        CCCGTATAAAC AGTCTG GTTCATACGAG         ATTATTAACGCTCGA  58 343
AV939_RS02860 NONE
AV939_RS02855 NONE
AV939_RS02850  663634 ..  663661 -  -6.2  -4.15396   TTTCAAAGCAAATAA        GGTCTACAACCG TATT CGGTCGTCTACC         CGTTTTGATGAATTG  68 21
AV939_RS02845  662144 ..  662155 -  -5.8  -4.14511   AACCCTATTTGAAAA                TGGC GATT GCCA                 ATTCTTTTTACAGGA  65 367
AV939_RS02820 NONE
AV939_RS02815 NONE
AV939_RS02810  654139 ..  654158 - -13.6  -5.22289   CAGTAAAGATAAAAA            TGCCGAGC AGGT GCTCGGCA             CTTCATTACGTATCC 100 44
AV939_RS02805  653125 ..  653137 - -10.5  -3.53012   CTTGTGGCCCCGAAA                GGGGC CAC GCCCC                TTTTCCAACATCGCT  81 67
AV939_RS02795  651998 ..  652009 -  -7.2  -2.57132   TGCGTGGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGTATGCGTC  59 338
AV939_RS02790  651265 ..  651277 -  -6.2  -3.86822   TAACTTGGCGATAAA                GCGC CTATT GCGC                AACCTTTGAAGTTAA  64 266
AV939_RS02780  650118 ..  650129 -  -3.6  -3.29043   AATGGCTTGTTATAA                GCCG AAGA CGAC                 TTAAACATTCAGCAT  49 26
AV939_RS02775  649617 ..  649628 -  -7.2  -2.57344   CACGTGGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGTATGCGTC  59 74
AV939_RS02770  649172 ..  649183 -  -7.2  -2.57344   CACGTGGGGCACAAT                GGCG AAGC CGCC                 CTGCGTGTATGCGTC  59 74
AV939_RS02765  648690 ..  648743 -  -7.3  -3.94402   ATAACTTTTAAATAA GGGGCGCAGGCACGTAGGGCATAATT GCG AAGC-CGCCCTGCGTGTATGCGTCCC AGCCCGCGAAGCGGG  72 70
AV939_RS02760  647578 ..  647590 -  -6.2  -3.56568   GAACTAGCCGCTAAA                GCGC CTATT GCGC                AACCTTTTAAGTAAG  62 270
AV939_RS02710  642243 ..  642255 -  -6.2  -3.91032   GAACTAGGCGATAAA                GCGC CTATT GCGC                GACCTTTGAAGTTAA  66 248
AV939_RS02705  641465 ..  641476 -  -7.2  -2.59881   CACGTAGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGTATGCGTC  59 74
AV939_RS02700  640762 ..  640774 -  -6.2  -3.53761   GAACTTGGCGGTAAA                GCGC CTATT GCGC                AACCTTTGAATTTAA  60 249
AV939_RS02695  639671 ..  639724 -  -7.3  -3.19246   CTAACTTTAAGCTAA GGGGCGCAGATACGTGGGGCA TAATGGCGAAGC CGCCCCGCGTATAGGCGTCCC AGCGACCGAAGGGAG  62 519
AV939_RS02690  639286 ..  639338 -  -6.3  -3.94402   ATAACTTTTAAATAA GGGGCGCAGACATGTGG-GCTA TAATGCGAAG CAGCCCCGCATGTATGCGTCCC AGCGAACGGAGTGAG  66 67
AV939_RS02685  638647 ..  638700 -  -7.3     -3.94   CTAACTTTTAAATAA GGGGCGCAGGCATGTGGGGCA TAATGGCGAAGC CGCCCCGCATGTATGCGTCCC AGCGAACGAAGTGAG  72 57
AV939_RS02655  635269 ..  635323 -  -9.3  -3.63837   ATAACTTTCCAATAA CGGG-CGCAGACATGTGGGGCATAATG GCG CAGC-CGCCCCACGTGTATGCGTCCCA GCGAACGTAGTGAGT  78 56
AV939_RS02650  634929 ..  634983 - -15.1  -3.63837   ATAACTTTTCAATAA CGGG-CGCATACATGTGGGGCATATT GGCG AAGCCGCCCCACGTGTATGCGTCCCA ACGAACGCAGTGAGT 100 56
AV939_RS02645  634419 ..  634471 - -12.7     -3.94   CTAACTTCCAAATAA GGGGCGCAGACACGTGGGCGA TAATGGCGAAG CCGCCCATGTGTTTGCGTCCC AGCCTGCGCCAGCAG 100 58
AV939_RS02640  633467 ..  633478 -  -7.2  -2.57344   CATGTGGGGCATAAT                GGCG AAGC CGCC                 CCGCGTGTATGCGTC  59 88
AV939_RS02635  632369 ..  632416 -  -6.2   -3.3363   TCAATAATAAGTGAA CCATGTGCTGGCGGGCGATTTGC TCA GCAAATGGCATGACAGC-CTTGG TGAATCTTAATTTAT  58 59
AV939_RS02630 NONE
AV939_RS02625  631642 ..  631700 -  -6.9  -2.99937   TAACACCCAAATAAG GGGTACAAACATGGCGGCTATAA TCGGAACGAAGTG CCACAGCCGTCATGTTTGTATCC CAGCGAGCCAGCGAG  61 71
AV939_RS02620  631023 ..  631041 -  -4.4  -3.48276   CCTTTTGGCACATAA             CGGCCCGC ATA ACGGGCAA             AAATACGTAGGCTAC  53 122
AV939_RS02615 NONE
AV939_RS02610 NONE
AV939_RS02605  629348 ..  629371 -  -9.6   -3.2613   AATAAGTAGCAGCAA          TAACGGGGGA GTGA TCCTCCGTTA           TTATTCCTTCGAATT  75 272
AV939_RS02595 NONE
AV939_RS02590 NONE
AV939_RS02585  626370 ..  626380 -  -5.4  -3.71848   GTTTTCCACTAACAA                 GCTA TCC TAGC                 TTCTTTTGCCAAAAC  62 16
AV939_RS02580  625962 ..  625973 -  -2.2  -4.56775   ATCGTTTGGTAAAAA                GC-GC AGT GCTGC                ATGAAGATGCAAAAG  61 173
AV939_RS02565  621463 ..  621478 -    -9  -5.03747   AAAGGCGTTAAAAAA              GGAGAG CATG CTCTCC               TTTTCTATTATGCGC  91 72
AV939_RS02550 NONE
AV939_RS02545 NONE
AV939_RS02540  617571 ..  617606 -  -2.1  -4.07877   TTACGTTAGAAATAA   TATAAAAACTCGGC-AT TAAT ATGGCCGGGTTTTT-TA    CGTTTAGCGCAGGCG  54 54
        murQ NONE
AV939_RS02525 NONE
AV939_RS02520  610305 ..  610324 -  -7.2  -3.74693   GTTTAGCCGAGCAAA            TTGCG-GCT ATC AGCACGCAA            CTTGAAACCGCAGAG  68 80
AV939_RS02505  605471 ..  605489 -  -2.4  -4.63542   TAGAACTGTGAAAAA             TAGACTTA GCG TTAGCCTA             TCGTGGCTCGCACTA  61 38
AV939_RS02500 NONE
AV939_RS02495  602706 ..  602717 -  -2.2  -4.08394   ACACTGTGTTGAAAA                GATG CCGT CACC                 GCCTTCCCATAATGG  55 272
AV939_RS02470  598516 ..  598531 -  -4.6    -3.338   AGCAATTAAATTTAA              GGGCAC AGAT ACGCCC               TTACGTTTTCGCTAT  52 26
AV939_RS02460  597046 ..  597084 -  -3.8  -4.87318   TTTAAAATTCAAAAA  GCCAG-CGTACAGGGGG TTATTT CACTGTGTACGTCTGGC   TTTTTTGTTTTTTAA  71 69
        nhaA  591210 ..  591228 -  -8.8  -3.47573   TTATGCAGATGATAA             GGCGGC ATGTCTA GCCGCC             GGTATGAATGCACAT  71 68
AV939_RS02400 NONE
AV939_RS02395  582111 ..  582137 - -11.6  -5.75945   AGTTGCTAAAAAAAA         TGGGATGCTACC TAA AGTCGCATCCCA         TTTTTTTATTATTTA 100 57
AV939_RS02355  575355 ..  575378 - -15.4  -3.80858   TGATAATGTACCAAA          GGCGAGTAAC GAAA GTTACTCGCC           TTTTCCGTAATAGGC 100 17
AV939_RS02305  564639 ..  564653 -  -2.7   -4.7339   AACAAAGCGTAAAAA               TGCGC CTTAT GCGCC               AGGCGGTTGGCTGTG  65 17
AV939_RS02300 NONE
AV939_RS02295 NONE
AV939_RS02290 NONE
AV939_RS02275  559415 ..  559426 -    -3  -2.87274   GGGCACAACCAAGCA                TTGT TGAA ACAA                 GCTGGTGACGATATT  42 301
AV939_RS02265 NONE
AV939_RS02260 NONE
AV939_RS02255 NONE
AV939_RS02250  555812 ..  555833 -  -8.7  -5.76633   CTAGACATAAAAAAA           CGCGCAG TGTTGAAG CTGCGCG            TTTTGTTTTAAGTGG 100 55
AV939_RS02225  550965 ..  550987 - -12.1   -5.9873   CCAGTACAAAAAAAA           GACGCAAAC TAAAG GTTTGCGTC           TTTGCTTACGTTCCA 100 69
AV939_RS02210  547907 ..  547921 -    -5  -3.41978   GTACAAGCCAATTAA               GCCTAA TTT TTAAGC               GTGGCGGCGCTAGCC  56 135
AV939_RS02200 NONE
AV939_RS02195  545169 ..  545184 -    -4  -2.57132   GTCTTGTTTCATAAT              GCGT-CT CCT AGTACGC              CATGTTCCGGTGCTT  45 3
AV939_RS02190 NONE
AV939_RS02185 NONE
AV939_RS02180 NONE
AV939_RS02175  540290 ..  540318 -  -7.4  -3.02144   CTATTTTTGTTAACA       GGGTGCGCGCTAA AGTG TCAGCGCGC-CAC        GACATTGCTAGATAT  61 33
AV939_RS02170 NONE
AV939_RS02165  536771 ..  536782 -  -4.4  -2.71731   TTTAGCGCTTAATGA                TCGT TACA ACGA                 AAGTTTACCCATTCT  47 211
AV939_RS02140  529334 ..  529344 -  -5.4  -3.37487   GCATAGCGCGAAAGA                 CATC GAT GATG                 CGCTAAACGAAGCGA  56 183
AV939_RS02120 NONE
AV939_RS02115 NONE
AV939_RS02110 NONE
AV939_RS02105 NONE
AV939_RS02100  518567 ..  518586 - -11.4  -4.89729   CAGAAAACGCAAAAA            GCGGACTG CTCT CAGCCCGC             ATTTTACCTTGAATA 100 49
        aroK NONE
AV939_RS02090  516657 ..  516678 -  -4.3  -3.95051   CAATAACCCCATAAA           GCCCAATAC CTGT GTAAAGGGC            TAGCAAATAAAACGA  59 74
AV939_RS02085  515028 ..  515044 -  -3.7  -3.63782   CAATACCACGCTAAA              GATAGAT TGT ATCTTTC              CTCATACGATGGAAC  53 108
AV939_RS02080  513848 ..  513858 -  -8.2  -3.70853   GTAATGAGTCAACAA                 CCGG GTA CCGG                 CTTCTGGTCAGTGCT  69 204
AV939_RS02060 NONE
AV939_RS02055 NONE
AV939_RS02050  509874 ..  509884 -  -6.8  -4.27512   TGGCAGAATAAATAA                 GGGT TAC ACCC                 TAGGCGTTTAGAAAA  73 25
AV939_RS02045 NONE
AV939_RS02040 NONE
AV939_RS02035 NONE
        astD  504368 ..  504385 - -11.3  -4.55295   TGTCCTATAAATAAA             GCCGCTA TTAA TAGCGGC              TTTGAATGTAGTGGT  90 45
AV939_RS02025  503458 ..  503479 - -11.7  -4.52589   TTTCCTGACAGAAAA           TAAAAGGGC TTTC GCCCTTTTA            TTTATCGCATATCAG 100 86
AV939_RS02005  494797 ..  494807 -  -6.8  -4.08767   CTCACCGGGGTAAAA                 GCCA TGT TGGC                 CAATCGTATGGCAGA  70 176
AV939_RS01985 NONE
AV939_RS01980 NONE
AV939_RS01975 NONE
AV939_RS01970  485474 ..  485486 -  -6.3  -4.63527   CGAGCAGGCGAAAAA                TTCAG AAT CTGAA                TAATGTTGGTGAGGC  74 42
AV939_RS01945  479902 ..  479917 -  -2.6  -3.23464   AAAAGAACTCAAAAG              GCCTTAG AGT CTAAG-C              GGCTAGTCTTTCACA  46 28
AV939_RS01930  476871 ..  476901 - -14.1   -3.9122   TAGTGGGCGAAATAA       GCTTAAGGAGCGG TGACT CTGCTCCTTAAGC       AAACTATTTAGTTTT 100 33
AV939_RS01925  476038 ..  476088 - -10.8  -5.61596   ATTTGGATAAAAAAA CAGGTAGGCAGTAAAAAGCAT CCAACTCAAT ATGCTTTTTATTGCCT-CCTG CAAAGCCCCAGGGAG 100 182
AV939_RS01915  473260 ..  473270 -  -2.4  -2.54193   TACCATGTGAAGTTA                 TGCC GTT GGCG                 CTTGTTTTAGAATTT  39 12
AV939_RS01910  471793 ..  471805 -  -6.9  -3.79164   TCAGAAAGAAATGAA                GGGGC GAT ACCCC                AAGCACTTTTGGCCA  66 123
AV939_RS01900  468327 ..  468343 -  -3.7  -4.59773   TTTTAGGGTGAAAAA              GCCTA ACTGAAA TAGGC              TATTTTGCTATAAAT  66 71
AV939_RS01895  467330 ..  467354 - -15.8  -5.22006   GCACCACAATAAAAA          GCCAGACGAG TCACT CTCGTCTGGC          TTTTTTGTTTATCAC 100 66
AV939_RS01885  464117 ..  464151 -  -3.6  -5.11112   AAAGGTCAAGAAAAA    GCCGCGA-AATGAGA TGAATT TTTCAATATCGCGGC     TTCTTTAGAGCGGTT  73 47
AV939_RS01880  461856 ..  461883 -  -9.9  -2.66106   CAGTGCAACAATCCA        GTTGCCGTGGA ACGAAG CCCACGACAAC         CAAGTAAAACTTCAA  68 79
AV939_RS01865  458215 ..  458233 -  -8.2  -3.11833   AAATATAAACAATTA             TGCTTCTC ACG AAGAAGCA             CTGAATTACGCGTTC  68 97
AV939_RS01855 NONE
AV939_RS01850  454378 ..  454393 - -10.4  -4.78149   CTTACAATTGAAAAA              GCCGCT CTTG AGCGGC               TTTTTTATTGCTTAA  91 58
AV939_RS01790  446678 ..  446702 -  -2.1  -3.77087   TATTTAATACTGAAA          CGCTCAAATCT ACA AAATTAGAGTG          TTAGTAAATATTTCA  50 44
AV939_RS01785  446091 ..  446108 -  -8.4  -5.46698   GCTAAAAGTAAAAAA             GCCCGA TGAATT TCGGGC              TTTTTTTATGAATTA 100 50
        gpmA  442109 ..  442127 - -13.2  -5.64274   GTAGGCATAAAAAAA             CCGCAAAC ATT GTTTGCGG             TTTTTAGTTGTCGCT 100 79
AV939_RS01770  440394 ..  440415 - -14.5   -4.1822   TCCCATTCGAAGAAA           GGGCTATCC TAAC GGATAGCCC            TTTTTTTATGCTTGT 100 432
AV939_RS01745  433516 ..  433544 -  -8.2  -3.80174   AGATTCCTACAACAA       TG-CCACTTACCC AAAT GGGCAAGCGGGCA        GTGTGTATAAGCAGA  71 523
AV939_RS01705  424809 ..  424822 -  -3.8  -2.72471   GCGCTATTACACAAT               CTGG GCTGGG CCAG                TGCTGCCCCTAGCAA  45 3
AV939_RS01700  423809 ..  423833 -  -4.9  -3.42996   CATTACTCATGATAA          CGACACCTACA ACA TAAAGGTGGCG          TTATCATAACGATAT  56 79
AV939_RS01695  423436 ..  423465 - -13.7  -3.69483   ATGCTATTTAAAATA       GAAAAGCGAAGCC AGTG GGCTTCGCTTTTT        TTATATATATCTTCT 100 26
AV939_RS01670  414316 ..  414336 -  -3.2    -4.564   AAGGCTAAACGAAAA            GCCGCTAG TTCCG CTAACGCC            TTTATCTTTGATTTA  64 163
AV939_RS01645  407800 ..  407821 - -13.1   -5.7946   GGGGCAATAAAAAAA           GCCGATGAT AAGT ATCATCGGC            TTTGGTTTAGTAGCT 100 54
AV939_RS01640 NONE
AV939_RS01635  405860 ..  405875 -  -4.6  -3.73775   TGTAGCCTCAGCAAA              TGGCGG GTTT CAGCCA               ACCGCTAAAGCGTGC  58 243
AV939_RS01580  394162 ..  394173 -  -2.2  -2.77781   CTTCATGAAAAGCGA                TAGC CTTT GCCA                 TGCAAGGTAGAAAGC  41 1
AV939_RS01575  392416 ..  392431 -  -3.3  -4.72497   CAGGTACTAAGAAAA              CAAGA TTGGTC TCTTG               GCGGGCAAGCCTGGG  66 427
AV939_RS01555  387616 ..  387637 - -10.1  -3.93963   ACCATTATTCAGAAA           GCCCTTGCA GAAA TGCGAGGGC            TTTTTTGATCTCGGT  83 215
AV939_RS01535  385056 ..  385068 -  -7.7  -2.67934   ATATTTAGTAAAGAG                CGCAT AAA ATGCG                TTTTTTTTAAACATC  62 32
AV939_RS01530 NONE
AV939_RS01525  383090 ..  383110 -  -8.3  -2.70932   CTGTTGCGCGAATTA            GGGCTGA CATCTAT TCAGCCC            CATATATCGAATATA  65 88
AV939_RS01520  381601 ..  381614 -  -3.1  -3.70902   GGCCGTATATCTAAA               CGAAC ATAG ATTCG                TAAAGTTTTATATAT  53 7
AV939_RS01515  379790 ..  379803 -  -2.4  -2.59079   ATTAAATTCAAGGTA               TTGG GGTTAG CCAA                CGAATTTCAAGCAAA  40 61
AV939_RS01510  378893 ..  378910 - -12.7  -5.58454   GCTACACGAAAAAAA             GCCGCTC TATT GAGCGGC              TTTTTGGTATTTAAT 100 91
AV939_RS01500  374383 ..  374395 -  -3.4  -4.39287   TTAATCAGATGAAAA                TAGC AGGAA GCTA                GAGTCTCTGTTTCGA  62 93
AV939_RS01490 NONE
AV939_RS01485  369889 ..  369904 - -11.8  -4.70626   TAAGAATTTGAAAAA              GGCGCC GGTT GGCGCC               TTTTTTATTGCAATT 100 123
AV939_RS01345  339913 ..  339931 - -11.7  -4.34402   TTTTTTATATTAAAA             GCGCGGT TTATT ACCGCGC             TGTATAAGGGAGGGG  93 45
AV939_RS01340  336811 ..  336832 - -14.5  -4.26871   TAACCTATGAATAAA           TGGCAGGGT TCTC ACCCTGCCA            GTATATTCTTAGAAT 100 34
AV939_RS01335 NONE
AV939_RS01330 NONE
AV939_RS01325  332912 ..  332942 - -14.1  -3.49687   ATTTTGTATAAAAAC       CAGGGAGGGTGTT TGTAC AACACCTTCCCTG       TTTAATGTTACTTAG 100 33
AV939_RS01320  330509 ..  330526 - -11.3  -5.88476   AAAACAAATAAAAAA             GCGAACC TAGT GGTTCGC              TTTTTTTGAAGCTTT 100 64
AV939_RS01290 NONE
AV939_RS01285  320010 ..  320020 -  -8.2  -3.18274   CCTATTTTAACGTAA                 CGGG GTT CCCG                 TCAGGGTTCCCCATA  68 88
AV939_RS01240  296209 ..  296219 -  -6.8   -3.3482   GAATGGTGCAATCAA                 GTGC ATA GCAC                 ACGTTGAGTTAGCCC  61 85
AV939_RS01235 NONE
AV939_RS01230  294380 ..  294392 -  -4.7  -3.21593   CATTCCCTCACAATA                CCGGC GAA GCGGG                TGAACGAGGGTTGAC  52 5
AV939_RS01225 NONE
AV939_RS01220 NONE
AV939_RS01215  289320 ..  289331 -  -2.2  -4.53777   TTGAATTAAAAACAA                GAAG TTCT CCTC                 TTTGCTAGACTTAAA  61 347
AV939_RS01210 NONE
AV939_RS01205  287587 ..  287602 -    -9  -3.15592   AATTTTCATGAAAAG              CCCTGT TAAT ACAGGG               TTTTTTTAAGAAAAT  70 127
AV939_RS01175  279853 ..  279885 - -10.6  -2.82253   AATTTAAAATAAGAT      CGTGATCTGCCTAG ACTAA CTGGTCAGATCACG      TTAACTCAACTAAAT  76 275
AV939_RS01155  273749 ..  273776 - -12.8  -4.62302   TAACAGTGCGAAAAA        GAAAAACGCGCC GAAA GGCGCGTTTTTT         TTCTTGATTCTAAGC 100 100
AV939_RS01145 NONE
AV939_RS01140  270844 ..  270863 -  -4.3  -3.71686   CTTAAGCCAAGATAA            GCTCCACT TAGCT AG-GGAGC            TCATAATCAAAAAGA  57 46
AV939_RS01120 NONE
AV939_RS01115 NONE
AV939_RS01110  265402 ..  265430 - -11.1  -5.06414   TTCGGGTAACAAAAA       GCGGAGGCAGCT GAATAG AG-TGCCTCCGC        TTTTTTGTGCCTAAA  93 64
AV939_RS01100 NONE
AV939_RS01095  262836 ..  262880 -  -4.5  -4.81083   CTTAAGCACGAAAAA TCCCGCGAATACGACAATAA ATGCCG TTATCATCGCATT-GCGTGA TTAAAATGCAAGAGA  71 26
AV939_RS01090  262645 ..  262666 -  -3.7  -2.81195   ATAAGCGAAAAAATC           CACTAGTGAG ATT CTC-CTGGTG           TGGAGGCGGGTTGGC  45 6
AV939_RS01085 NONE
        dapF NONE
AV939_RS01075  259818 ..  259841 -    -9  -2.71011   AGGGTTCGCTAAGCA          TAGTTTCCGT TGTC ACGAAAACTA           GTACCCCATCATCTC  67 23
        xerC NONE
AV939_RS01065  257778 ..  257798 - -11.2  -3.76775   GCTAAGATAGGTAAA            GGCGTGAT GTTCG ATCACGCC            ACCGGTATTGTAGTG  91 384
        uvrD NONE
AV939_RS01050  253522 ..  253548 - -13.2  -2.78712   CGGCTAAGGTAACCA         GTGAAACTCAAA CTT CTTGAGTTTCAC         TGTTTAGGTAAACCT  93 6
AV939_RS01030  248564 ..  248574 -  -2.4  -3.60098   ACGTGTTAGCTGAAA                 TGCG ACA CGCC                 AGTGCTAACCAAGCG  48 41
AV939_RS01020 NONE
AV939_RS01015  245867 ..  245885 -  -3.2  -4.65969   AAGAAATAATGAAAA             GAATGA TGAAAAG TCATTC             ACGTTTCATTAAATA  64 24
AV939_RS01010  242822 ..  242838 -  -2.1  -3.28712   TCTTGCCTTTTACAA              GGGCTTG AGA CAGGCAC              ATCTCCCCATTCATT  45 107
AV939_RS01005  242018 ..  242034 -  -9.5  -2.78816   TTACTCTGCATGAGA              GTGCTTA AAC TAAGCAC              TTTTACAGGCAATGT  72 142
AV939_RS01000  240541 ..  240571 - -11.3  -4.65895   CTTGCCATCTAAAAA      CAAACGC-GCCTGT ATGA ACAAGCCGCGTTTG       GTTTTTACGTTGGTG  90 72
AV939_RS00995  239477 ..  239494 -  -9.1  -3.53444   TTATGGTTGGTTAAA             CGCTAGC TACA GCCAGCG              CTTCCACAGCATCGC  74 14
AV939_RS00990 NONE
AV939_RS00985  236793 ..  236822 -  -4.4  -3.67597   TTGCCTATTTAATAA       TGTAG-CCATAGC TGCAC GCTATGCTCTACA       AAACTATCAGCTTTC  55 494
AV939_RS00950  227490 ..  227508 - -13.2  -5.24129   GTCGGGTATAAAAAA             GCTCAGGT AGT ACCTGAGC             TTTTTTGTGTATAGC 100 65
AV939_RS00935 NONE
AV939_RS00930  224714 ..  224727 -  -2.3  -5.50499   CTACAGCCAAAAAAA               GCCCT CCGG ATGGC                TACAACTTTGCTTAA  75 146
AV939_RS00925 NONE
AV939_RS00920 NONE
AV939_RS00915  221175 ..  221186 -    -3  -2.55668   GATGGTGATATTAAC                CTTA CGCG TAAG                 ATAACGTATTGGACG  41 111
AV939_RS00910  218999 ..  219009 -  -4.6   -3.8512   GATGTATTACAACAA                 GCAC TTT GCGC                 GGCATTATCAAACTA  57 38
AV939_RS00905  218155 ..  218190 - -11.4  -2.80028   ATGAAGAGGTGAAAG    TAAAGCAGTGAAATAA GCAA TTTTTCCACTGCTTTA     TTTATATTAATCAGA  81 54
AV939_RS00900  217117 ..  217145 - -11.1   -4.8048   TGCGCATACTAAAAA        GCGACTGTTCAGT AAC ATTGAACAGTCAC        TTTTAGCTATTTTTA  91 82
AV939_RS00870  210923 ..  210955 -  -6.3  -3.70076   CTAAACCTATCGAAA      GGCTTGAGCATAA TGTGAAG TGATGCTCAGGCC      TTTTTTTGATCGCAA  62 85
AV939_RS00825  201983 ..  201996 -  -4.5  -3.89346   GCGCTATCCCAGAAA               GCTAC CAAA GCAGC                CATTAGATAGAGCTA  59 110
AV939_RS00815 NONE
AV939_RS00810 NONE
AV939_RS00805  197795 ..  197817 -  -4.3  -2.75481   CCGCAAGGGCAATGA          CTAAC-CATT TCAT AATGCGTTAG           CTCCCTGACTGAATG  48 12
AV939_RS00800  196568 ..  196592 - -12.9  -5.77571   ATTAAAAAAGAAAAA          GGCCAGTCAAT TGA AATGACTGGCC          TTTCTTTTATCTTCT 100 68
AV939_RS00770 NONE
AV939_RS00765  187163 ..  187188 - -11.9  -4.63479   GAGTAGAAAGTAAAA         GGCGCGCTT TTACGATG AAGCGCGCC          AAAAAAAGTAGGGTA 100 57
AV939_RS00760 NONE
AV939_RS00755 NONE
AV939_RS00750  183427 ..  183441 -    -5  -3.79906   TCATGGGGATAACAA               CGCATA GTT TATGCA               CAAGGCACCTCCGAT  60 19
AV939_RS00745 NONE
AV939_RS00740 NONE
AV939_RS00735 NONE
AV939_RS00730  180232 ..  180246 -  -5.6  -3.62418   ATAATTTACGTGAAA               CTCGCC CTA GGCTAG               CCATCAAATTTAGCG  59 35
AV939_RS00725  177463 ..  177478 -  -8.2  -5.34632   AATAAAAGATAAAAA              GACCCC AAAA GGGGCC               TTTGCTTACAGGATG 100 88
AV939_RS00720 NONE
AV939_RS00715 NONE
AV939_RS00710 NONE
AV939_RS00705  172224 ..  172237 -  -5.3  -3.05384   TGTCTGGTTAGCTAA               GGTAA GCAT TTACC                CTCCTGCTACAAGCG  53 21
AV939_RS00700 NONE
        thiH  170331 ..  170351 -  -6.1  -4.67354   AAGAGATATACAAAA            TGGCTAGCT AAA AGCCATCCA            GTCTTTCCATACGGG  74 8
AV939_RS00690  169026 ..  169054 -  -3.1  -4.40358   ATTCACGTTAGAAAA        TCTAATCCATCTT CTT AAGATGGTTTGGG        TGGCGGTGGACGATT  62 11
AV939_RS00685  167507 ..  167545 - -12.7  -3.75571   GAAGCTATTAAAATA  GGGCGAATAACAGCGTTA TTCA TAACGCTGTTATTT-CCC   AAGTGATACCTTTTA  95 94
AV939_RS00670  164403 ..  164425 -  -5.4  -4.23674   TCGCATTAACAGAAA           GCTGTTCGGC AAA ACCGCTCAGC           ACTAGTGGGTTCAGT  68 175
AV939_RS00655  161099 ..  161120 - -13.1  -5.71983   TGAATTAGAAAAAAA           GGCCTACTT AGAA AAGTAGGCC            TTTTTTTTGTTTACC 100 44
AV939_RS00620  151520 ..  151533 -  -9.5  -4.88711   ATAAGACACTAAAAA               GCGCC CAAG GGCGC                TTTTTTTATATATGT  91 97
AV939_RS00575 NONE
AV939_RS00570  132779 ..  132804 - -14.1  -2.66329   TTAAGCCAATAAGAT         GAAGGCAACCC GTTC AGGTTGCCTTC          TAGTAAAGATGCTGC  91 91
AV939_RS00565  131583 ..  131603 -  -3.2  -4.13911   CAAAATACAAGGAAA           CCGCT-CGC GGAG GCTTAGCGG            TCAATATTATAGAAT  57 153
AV939_RS00555  127877 ..  127904 -  -7.8   -3.1585   CTACTCAATGTAAGA        GGCGCTAGTA GGGTAGTT TACTAACGCC         ATGCCTGTAACTGGT  65 54
AV939_RS00550  126455 ..  126482 -  -9.2  -5.03314   TTTATGGGCAAAAAA        CCGTGGTGTTCAC TAA GT-AACGCCACGG        CAGTATACGCGCATT  91 174
AV939_RS00510 NONE
AV939_RS00505  115547 ..  115557 -    -4  -2.83522   ATTTTTTGATTAAAT                 TTTG ATT CAAA                 TAACCGTTTTATTAG  45 317
AV939_RS00500  114155 ..  114170 -  -3.2  -3.56092   TCATTATTTGCTAAA              TGCGTC GTGT GAAGCA               GATAGTTGAAAATTG  51 272
AV939_RS00495 NONE
AV939_RS00490  112535 ..  112547 -  -2.7  -3.05997   TGGCTACAAAGGAGA                CACTT CAA AAATG                CCATAATCACAGCCT  44 1
AV939_RS00485  110293 ..  110303 -  -2.4  -3.57908   CAGCAAACATGACAA                 CGCC TAT GGTG                 GTTCGATTTCTTGTT  48 127
AV939_RS00480 NONE
AV939_RS00475 NONE
AV939_RS00470 NONE
AV939_RS00465  103870 ..  103883 -  -3.9  -2.96899   TTCTAAGTAAGGATA               TAGTT TTGT AACTA                TTTGGTTGTACTTAG  47 214
AV939_RS00460 NONE
AV939_RS00455 NONE
AV939_RS00450 NONE
AV939_RS00445 NONE
AV939_RS00440   93496 ..   93528 - -12.9  -3.91164   AATTTTTGAAAAATA      GAAAGAGCTGATATT TAG AACATCAGCTCTTGC      ACAGTTGGTTTGTAA 100 63
AV939_RS00415   87085 ..   87119 - -16.6  -3.14527   GAAGCGTTAGTAATA     TGCTGCTTGATTTCCA CTT TGGCAACCAAGCAGCA     ATCTAAATTAGGCTT 100 28
AV939_RS00405   84564 ..   84578 -  -7.8  -5.20222   ACCAAATAAAGAAAA               GCCGAC TAA GTCAGC               TTTATTATGAGCATG  91 128
AV939_RS00395   83365 ..   83377 -  -4.8  -3.73647   CTGACGTACCAATAA                GCAG CCCGC CTGC                TAAACCGGCTAATGG  60 153
AV939_RS00380   81055 ..   81087 -  -2.7  -2.61831   TCTACTCGAAAAACG      CTACTTTTTCCAACA AAT TGTTAGTAAATGTCG      AAGGCTAGATACCTT  41 30
AV939_RS00375   78381 ..   78398 -  -9.9  -3.64703   CTTGGCTTAGTTAAA             CAGCTAG CCTG CTAGCTG              TTTCATATCAAGCAC  80 11
AV939_RS00365   75628 ..   75638 -  -3.2  -4.18018   CGCTTTTATCGAAAA                 CCAC TAT GTAG                 GCTTGGTATTTACGT  60 182
AV939_RS00350   73574 ..   73593 -  -9.2  -3.80893   AGCCGATAAGCGAAA            GCAGGGGC AATA GCGCCTGC             TTTCTTATTAGCGAG  79 56
AV939_RS00305 NONE
AV939_RS00300   63376 ..   63411 -  -7.6  -4.54449   ACACGTTAGATAAAA    CAGACTGAGCTCAATA GGCA TGTTGAGCGCAGTGTG     TTTAACATTTTTTAT  83 50
AV939_RS00275 NONE
AV939_RS00270   59484 ..   59508 - -17.3  -3.08133   TAGCTAGTTAGGTAA          GCACGGAGTAA CGA TTACTCCGTGC          TTATTTTCATCGTAA 100 84
AV939_RS00240 NONE
AV939_RS00235   52513 ..   52537 -  -7.1  -5.07011   TACACAAATCAAAAA          GGCGCTGTATT AAA ATTAAAGCGCC          TTTATTTAATCCGTG  85 48
AV939_RS00220 NONE
AV939_RS00215 NONE
AV939_RS00210   46778 ..   46813 - -15.1  -3.43217   TAGGAATATTCATAA    CACTATAATACTGTA TATTTG TACAGTATTATAGTG     TAGAGGTTTGTCTTT 100 106
AV939_RS00205 NONE
AV939_RS00200 NONE
AV939_RS00195 NONE
AV939_RS00190 NONE
AV939_RS00185   39845 ..   39855 -    -4  -3.90922   ATTTTCTTGAAATAA                 GTAA TTA TTAC                 AGGGGTTTCCACACA  57 22
AV939_RS00180   39052 ..   39069 - -14.1  -5.12971   AACAGGCAATAAAAA             GCCCCGC AGGG GCGGGGC              TTAAACTAGGCGACT 100 144
AV939_RS00150   31874 ..   31891 - -11.3  -3.78034   GACTGATATGAATAA             GCAGGCT GTTA AGCCTGC              TCTTCTCTATATTCA  84 16
AV939_RS00140   30543 ..   30565 -  -9.1  -3.76393   ATATCGTAATCTAAA           GCGTTCCGT GTTTT ACGGAGCGC           TTTTTTATTTACTAT  76 30
AV939_RS00100 NONE
         fmt NONE
AV939_RS00090   21713 ..   21725 -  -6.3  -3.04517   ACCTGCGCCTAAAAT                GATGA TTT TCATC                GGTGTTTATGTGCCT  56 49
        trkA NONE
AV939_RS00070   14681 ..   14700 - -13.6  -5.76633   GCAGACATAAAAAAA            CCCCGACA AATC TGTCGGGG             TTAAAGCAAAGGTTT 100 182
AV939_RS00060   12742 ..   12763 -  -8.7   -5.4505   TTCGGCAAGAAAAAA           GGCGATGGC TTTC ACCATCACC            TTACATTGTTTGAGT 100 319
AV939_RS00055   11994 ..   12012 -  -2.4  -2.62735   ACACTGTCCACAGCA             TAAAACAG AGC CCGCCTTA             CTATTTCTTAAAGTC  40 26
AV939_RS00050   11487 ..   11504 - -11.3  -5.52096   AAACCCAATAAAAAA             GCGCTTC TCAT GAAGCGC              TTTTAAAAAACATAC 100 63
AV939_RS00040 NONE
        glyS    7679 ..    7698 -   -10   -5.4756   AACTCCAATAAAAAA            CGCTCAAC AGAT GTCGAGCG             TTTTTAGTCTATAAC 100 58
AV939_RS00030    7137 ..    7157 - -11.2  -4.63486   ACCTGGTTAATAAAA            GAGTAGGC TTAAT GCCTACTC            TTTTTCTTTATTATA  90 82
