A6F57_RS00035	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS00095	SM00363	S4 RNA-binding domain
A6F57_RS00100	SM00054	EF-hand, calcium binding motif
A6F57_RS00105	SM00450	Rhodanese Homology Domain
A6F57_RS00115	SM00028	Tetratricopeptide repeats
A6F57_RS00115	SM00448	cheY-homologous receiver domain
A6F57_RS00130	SM00448	cheY-homologous receiver domain
A6F57_RS00130	SM00850	LytTr DNA-binding domain
A6F57_RS00150	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6F57_RS00275	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS00280	SM00642	Alpha-amylase domain
A6F57_RS00290	SM00642	Alpha-amylase domain
A6F57_RS00295	SM00642	Alpha-amylase domain
A6F57_RS00335	SM00881	CoA binding domain
A6F57_RS00350	SM00861	Transketolase, pyrimidine binding domain
A6F57_RS00420	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS00445	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS00460	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6F57_RS00460	SM00292	breast cancer carboxy-terminal domain
A6F57_RS00460	SM00532	Ligase N family
A6F57_RS00465	SM00771	ZipA, C-terminal domain (FtsZ-binding)
A6F57_RS00485	SM00028	Tetratricopeptide repeats
A6F57_RS00540	SM00028	Tetratricopeptide repeats
A6F57_RS00555	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6F57_RS00605	SM00857	Resolvase, N terminal domain
A6F57_RS00650	SM00458	Ricin-type beta-trefoil
A6F57_RS00735	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS00735	SM00267	diguanylate cyclase
A6F57_RS00735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS00750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS00750	SM00267	diguanylate cyclase
A6F57_RS00770	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS00815	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS00865	SM00028	Tetratricopeptide repeats
A6F57_RS00865	SM00448	cheY-homologous receiver domain
A6F57_RS00870	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS00890	SM00267	diguanylate cyclase
A6F57_RS00905	SM01387	A6F57_RS00905
A6F57_RS00925	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS00935	SM00448	cheY-homologous receiver domain
A6F57_RS00935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS00940	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS00940	SM00091	PAS domain
A6F57_RS00940	SM00387	Histidine kinase-like ATPases
A6F57_RS00940	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS00940	SM00448	cheY-homologous receiver domain
A6F57_RS01075	SM00829	Enoylreductase
A6F57_RS01115	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS01120	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS01150	SM00852	Probable molybdopterin binding domain
A6F57_RS01355	SM00387	Histidine kinase-like ATPases
A6F57_RS01355	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS01355	SM00448	cheY-homologous receiver domain
A6F57_RS01425	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS01425	SM00267	diguanylate cyclase
A6F57_RS01430	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS01470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6F57_RS01475	SM00450	Rhodanese Homology Domain
A6F57_RS01490	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS01490	SM00448	cheY-homologous receiver domain
A6F57_RS01505	SM00448	cheY-homologous receiver domain
A6F57_RS01510	SM00387	Histidine kinase-like ATPases
A6F57_RS01510	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS01510	SM00448	cheY-homologous receiver domain
A6F57_RS01575	SM00631	A6F57_RS01575
A6F57_RS01580	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6F57_RS01595	SM01350	A6F57_RS01595
A6F57_RS01600	SM00642	Alpha-amylase domain
A6F57_RS01605	SM00642	Alpha-amylase domain
A6F57_RS01615	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6F57_RS01680	SM00749	bacterial OsmY and nodulation domain
A6F57_RS01705	SM00387	Histidine kinase-like ATPases
A6F57_RS01705	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS01710	SM00448	cheY-homologous receiver domain
A6F57_RS01710	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS01745	SM00822	A6F57_RS01745
A6F57_RS01770	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS01775	SM00858	A6F57_RS01775
A6F57_RS01820	SM00387	Histidine kinase-like ATPases
A6F57_RS01820	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS01820	SM00448	cheY-homologous receiver domain
A6F57_RS01870	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS01895	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS01895	SM00267	diguanylate cyclase
A6F57_RS01940	SM00267	diguanylate cyclase
A6F57_RS01950	SM00448	cheY-homologous receiver domain
A6F57_RS01950	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS01955	SM00387	Histidine kinase-like ATPases
A6F57_RS01955	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS02015	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS02015	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS02025	SM01060	A6F57_RS02025
A6F57_RS02035	SM00244	prohibitin homologues
A6F57_RS02050	SM00100	Cyclic nucleotide-monophosphate binding domain
A6F57_RS02100	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS02105	SM00257	Lysin motif
A6F57_RS02140	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS02190	SM00840	A6F57_RS02190
A6F57_RS02205	SM00098	Alkaline phosphatase homologues
A6F57_RS02210	SM00098	Alkaline phosphatase homologues
A6F57_RS02225	SM00244	prohibitin homologues
A6F57_RS02230	SM01321	A6F57_RS02230
A6F57_RS02245	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS02250	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS02255	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A6F57_RS02260	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A6F57_RS02275	SM00829	Enoylreductase
A6F57_RS02335	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6F57_RS02345	SM01007	Class II Aldolase and Adducin N-terminal domain
A6F57_RS02350	SM00100	Cyclic nucleotide-monophosphate binding domain
A6F57_RS02350	SM00419	helix_turn_helix, cAMP Regulatory protein
A6F57_RS02355	SM00825	Beta-ketoacyl synthase
A6F57_RS02360	SM00267	diguanylate cyclase
A6F57_RS02510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS02550	SM00341	Helicase and RNase D C-terminal
A6F57_RS02550	SM00474	3'-5' exonuclease
A6F57_RS02580	SM00487	DEAD-like helicases superfamily
A6F57_RS02580	SM00488	A6F57_RS02580
A6F57_RS02580	SM00491	A6F57_RS02580
A6F57_RS02585	SM00642	Alpha-amylase domain
A6F57_RS02745	SM00387	Histidine kinase-like ATPases
A6F57_RS02750	SM00493	A6F57_RS02750
A6F57_RS02775	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS02800	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS02820	SM00054	EF-hand, calcium binding motif
A6F57_RS02870	SM00028	Tetratricopeptide repeats
A6F57_RS02875	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS02875	SM01086	C-terminal, D2-small domain, of ClpB protein
A6F57_RS02885	SM00363	S4 RNA-binding domain
A6F57_RS02955	SM00861	Transketolase, pyrimidine binding domain
A6F57_RS03010	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS03020	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS03055	SM00358	Double-stranded RNA binding motif
A6F57_RS03055	SM00535	Ribonuclease III family
A6F57_RS03120	SM00938	Nitrogen regulatory protein P-II
A6F57_RS03205	SM00904	Riboflavin kinase
A6F57_RS03250	SM00563	Phosphate acyltransferases
A6F57_RS03265	SM00411	bacterial (prokaryotic) histone like domain
A6F57_RS03270	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS03270	SM00464	Found in ATP-dependent protease La (LON)
A6F57_RS03275	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS03275	SM00994	ClpX C4-type zinc finger
A6F57_RS03275	SM01086	C-terminal, D2-small domain, of ClpB protein
A6F57_RS03350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS03365	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6F57_RS03365	SM01240	A6F57_RS03365
A6F57_RS03380	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS03385	SM00564	beta-propeller repeat
A6F57_RS03405	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS03410	SM00028	Tetratricopeptide repeats
A6F57_RS03410	SM00257	Lysin motif
A6F57_RS03420	SM00562	A6F57_RS03420
A6F57_RS03450	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS03490	SM00850	LytTr DNA-binding domain
A6F57_RS03495	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS03495	SM00267	diguanylate cyclase
A6F57_RS03495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS03520	SM01323	A6F57_RS03520
A6F57_RS03590	SM00098	Alkaline phosphatase homologues
A6F57_RS03595	SM00260	Two component signalling adaptor domain
A6F57_RS03595	SM00448	cheY-homologous receiver domain
A6F57_RS03640	SM00028	Tetratricopeptide repeats
A6F57_RS03835	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS03835	SM00267	diguanylate cyclase
A6F57_RS03850	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS03885	SM00460	Transglutaminase/protease-like homologues
A6F57_RS03900	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6F57_RS03925	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A6F57_RS03930	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS03935	SM00220	Serine/Threonine protein kinases, catalytic domain
A6F57_RS03980	SM00822	A6F57_RS03980
A6F57_RS04020	SM00422	helix_turn_helix, mercury resistance
A6F57_RS04045	SM00060	Fibronectin type 3 domain
A6F57_RS04045	SM00631	A6F57_RS04045
A6F57_RS04220	SM00642	Alpha-amylase domain
A6F57_RS04450	SM00422	helix_turn_helix, mercury resistance
A6F57_RS04515	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS04550	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6F57_RS04570	SM01322	A6F57_RS04570
A6F57_RS04575	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6F57_RS04600	SM00271	DnaJ molecular chaperone homology domain
A6F57_RS04625	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS04640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS04665	SM00245	tail specific protease
A6F57_RS04695	SM00090	RIO-like kinase
A6F57_RS04715	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS04730	SM00487	DEAD-like helicases superfamily
A6F57_RS04730	SM00490	helicase superfamily c-terminal domain
A6F57_RS04745	SM00028	Tetratricopeptide repeats
A6F57_RS04755	SM00327	von Willebrand factor (vWF) type A domain
A6F57_RS04815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS04830	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS04845	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6F57_RS04870	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS04910	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS04950	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS04960	SM00640	Glycosyl hydrolases family 32
A6F57_RS05010	SM01011	Aminopeptidase P, N-terminal domain
A6F57_RS05035	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS05035	SM00387	Histidine kinase-like ATPases
A6F57_RS05035	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS05035	SM00448	cheY-homologous receiver domain
A6F57_RS05125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS05125	SM00895	A6F57_RS05125
A6F57_RS05135	SM00644	A6F57_RS05135
A6F57_RS05190	SM00957	SecA DEAD-like domain
A6F57_RS05190	SM00958	SecA preprotein cross-linking domain
A6F57_RS05205	SM00864	Tubulin/FtsZ family, GTPase domain
A6F57_RS05205	SM00865	Tubulin/FtsZ family, C-terminal domain
A6F57_RS05210	SM00842	Cell division protein FtsA
A6F57_RS05320	SM00028	Tetratricopeptide repeats
A6F57_RS05320	SM00267	diguanylate cyclase
A6F57_RS05330	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS05330	SM00448	cheY-homologous receiver domain
A6F57_RS05335	SM00387	Histidine kinase-like ATPases
A6F57_RS05375	SM00732	Likely ribonuclease with RNase H fold.
A6F57_RS05385	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS05415	SM01321	A6F57_RS05415
A6F57_RS05460	SM00986	Uracil DNA glycosylase superfamily
A6F57_RS05460	SM00987	UreE urease accessory protein, C-terminal domain 
A6F57_RS05485	SM00829	Enoylreductase
A6F57_RS05490	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS05490	SM00448	cheY-homologous receiver domain
A6F57_RS05515	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6F57_RS05520	SM00226	Low molecular weight phosphatase family
A6F57_RS05535	SM00448	cheY-homologous receiver domain
A6F57_RS05545	SM00448	cheY-homologous receiver domain
A6F57_RS05545	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS05550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS05550	SM00387	Histidine kinase-like ATPases
A6F57_RS05550	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS05645	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS05645	SM00448	cheY-homologous receiver domain
A6F57_RS05655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS05655	SM00895	A6F57_RS05655
A6F57_RS05680	SM00267	diguanylate cyclase
A6F57_RS05680	SM00448	cheY-homologous receiver domain
A6F57_RS05725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS05725	SM00091	PAS domain
A6F57_RS05725	SM00387	Histidine kinase-like ATPases
A6F57_RS05725	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS05725	SM00448	cheY-homologous receiver domain
A6F57_RS05745	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS05750	SM00656	A6F57_RS05750
A6F57_RS05765	SM00346	helix_turn_helix isocitrate lyase regulation
A6F57_RS05770	SM00458	Ricin-type beta-trefoil
A6F57_RS05770	SM00656	A6F57_RS05770
A6F57_RS05800	SM00450	Rhodanese Homology Domain
A6F57_RS05935	SM00448	cheY-homologous receiver domain
A6F57_RS05950	SM01230	A6F57_RS05950
A6F57_RS05960	SM00091	PAS domain
A6F57_RS05960	SM00387	Histidine kinase-like ATPases
A6F57_RS05960	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS05965	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS05965	SM00448	cheY-homologous receiver domain
A6F57_RS05970	SM00073	Histidine Phosphotransfer domain
A6F57_RS05975	SM00563	Phosphate acyltransferases
A6F57_RS05990	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS05990	SM00091	PAS domain
A6F57_RS05990	SM00267	diguanylate cyclase
A6F57_RS06000	SM00387	Histidine kinase-like ATPases
A6F57_RS06000	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS06000	SM00448	cheY-homologous receiver domain
A6F57_RS06000	SM01358	A6F57_RS06000
A6F57_RS06125	SM00267	diguanylate cyclase
A6F57_RS06130	SM00996	S-adenosyl-L-homocysteine hydrolase
A6F57_RS06130	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A6F57_RS06180	SM00028	Tetratricopeptide repeats
A6F57_RS06190	SM00387	Histidine kinase-like ATPases
A6F57_RS06195	SM01034	Sensors of blue-light using FAD
A6F57_RS06205	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS06230	SM00267	diguanylate cyclase
A6F57_RS06235	SM00028	Tetratricopeptide repeats
A6F57_RS06235	SM00267	diguanylate cyclase
A6F57_RS06245	SM00564	beta-propeller repeat
A6F57_RS06250	SM00062	Bacterial periplasmic substrate-binding proteins
A6F57_RS06265	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS06295	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS06320	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS06320	SM00448	cheY-homologous receiver domain
A6F57_RS06325	SM00091	PAS domain
A6F57_RS06325	SM00387	Histidine kinase-like ATPases
A6F57_RS06325	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS06325	SM00448	cheY-homologous receiver domain
A6F57_RS06330	SM00897	FIST N domain
A6F57_RS06330	SM01204	A6F57_RS06330
A6F57_RS06335	SM00900	A6F57_RS06335
A6F57_RS06345	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS06345	SM00448	cheY-homologous receiver domain
A6F57_RS06360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS06360	SM00895	A6F57_RS06360
A6F57_RS06395	SM00710	Parallel beta-helix repeats
A6F57_RS06410	SM00710	Parallel beta-helix repeats
A6F57_RS06415	SM00822	A6F57_RS06415
A6F57_RS06450	SM00240	Forkhead associated domain
A6F57_RS06455	SM00331	Sigma factor PP2C-like phosphatases
A6F57_RS06455	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6F57_RS06460	SM00240	Forkhead associated domain
A6F57_RS06470	SM00240	Forkhead associated domain
A6F57_RS06485	SM00220	Serine/Threonine protein kinases, catalytic domain
A6F57_RS06490	SM00331	Sigma factor PP2C-like phosphatases
A6F57_RS06490	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6F57_RS06500	SM00240	Forkhead associated domain
A6F57_RS06505	SM00240	Forkhead associated domain
A6F57_RS06505	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS06515	SM00487	DEAD-like helicases superfamily
A6F57_RS06515	SM00490	helicase superfamily c-terminal domain
A6F57_RS06530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS06530	SM00895	A6F57_RS06530
A6F57_RS06565	SM00267	diguanylate cyclase
A6F57_RS06570	SM00155	Phospholipase D. Active site motifs.
A6F57_RS06600	SM00448	cheY-homologous receiver domain
A6F57_RS06610	SM00387	Histidine kinase-like ATPases
A6F57_RS06615	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS06620	SM00486	DNA polymerase type-B family
A6F57_RS06625	SM00054	EF-hand, calcium binding motif
A6F57_RS06660	SM00360	RNA recognition motif
A6F57_RS06700	SM00986	Uracil DNA glycosylase superfamily
A6F57_RS06700	SM00987	UreE urease accessory protein, C-terminal domain 
A6F57_RS06705	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS06705	SM00267	diguanylate cyclase
A6F57_RS06705	SM00448	cheY-homologous receiver domain
A6F57_RS06780	SM00173	Ras subfamily of RAS small GTPases
A6F57_RS06780	SM00175	Rab subfamily of small GTPases
A6F57_RS06785	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS06785	SM00267	diguanylate cyclase
A6F57_RS06795	SM00563	Phosphate acyltransferases
A6F57_RS06800	SM00563	Phosphate acyltransferases
A6F57_RS06925	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS06925	SM00267	diguanylate cyclase
A6F57_RS06940	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS06970	SM00344	helix_turn_helix ASNC type
A6F57_RS06975	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS07015	SM00900	A6F57_RS07015
A6F57_RS07110	SM00028	Tetratricopeptide repeats
A6F57_RS07115	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
A6F57_RS07125	SM00267	diguanylate cyclase
A6F57_RS07125	SM00448	cheY-homologous receiver domain
A6F57_RS07130	SM00479	A6F57_RS07130
A6F57_RS07150	SM00387	Histidine kinase-like ATPases
A6F57_RS07150	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS07150	SM00448	cheY-homologous receiver domain
A6F57_RS07180	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS07180	SM00448	cheY-homologous receiver domain
A6F57_RS07195	SM00632	A6F57_RS07195
A6F57_RS07195	SM00642	Alpha-amylase domain
A6F57_RS07210	SM01358	A6F57_RS07210
A6F57_RS07215	SM00248	ankyrin repeats
A6F57_RS07220	SM01060	A6F57_RS07220
A6F57_RS07330	SM00984	UDP binding domain
A6F57_RS07495	SM00662	RNA polymerases D
A6F57_RS07500	SM00363	S4 RNA-binding domain
A6F57_RS07500	SM01390	A6F57_RS07500
A6F57_RS07560	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6F57_RS07565	SM01374	A6F57_RS07565
A6F57_RS07570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS07570	SM00387	Histidine kinase-like ATPases
A6F57_RS07570	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS07570	SM00448	cheY-homologous receiver domain
A6F57_RS07585	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6F57_RS07590	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS07590	SM00357	Cold shock protein domain
A6F57_RS07590	SM00955	A6F57_RS07590
A6F57_RS07605	SM00671	Sel1-like repeats.
A6F57_RS07655	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS07660	SM00344	helix_turn_helix ASNC type
A6F57_RS07675	SM00357	Cold shock protein domain
A6F57_RS07705	SM00448	cheY-homologous receiver domain
A6F57_RS07715	SM00387	Histidine kinase-like ATPases
A6F57_RS07720	SM00448	cheY-homologous receiver domain
A6F57_RS07730	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6F57_RS07750	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS07755	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS07770	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS07770	SM01086	C-terminal, D2-small domain, of ClpB protein
A6F57_RS07785	SM00487	DEAD-like helicases superfamily
A6F57_RS07785	SM00490	helicase superfamily c-terminal domain
A6F57_RS07800	SM00919	Malic enzyme, NAD binding domain
A6F57_RS07800	SM01274	A6F57_RS07800
A6F57_RS07850	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS07855	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS07865	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS07870	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS07870	SM00962	SRP54-type protein, GTPase domain
A6F57_RS07870	SM00963	SRP54-type protein, helical bundle domain
A6F57_RS07940	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS07955	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS07960	SM00448	cheY-homologous receiver domain
A6F57_RS07960	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS07965	SM00387	Histidine kinase-like ATPases
A6F57_RS07965	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS07975	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS07990	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6F57_RS08055	SM00838	Elongation factor G C-terminus
A6F57_RS08055	SM00889	Elongation factor G, domain IV
A6F57_RS08070	SM00663	RNA polymerase I subunit A N-terminus
A6F57_RS08095	SM00649	Ribosomal protein L11/L12
A6F57_RS08100	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6F57_RS08100	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6F57_RS08115	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS08135	SM00487	DEAD-like helicases superfamily
A6F57_RS08135	SM00490	helicase superfamily c-terminal domain
A6F57_RS08145	SM00782	PhnA Zinc-Ribbon
A6F57_RS08165	SM00642	Alpha-amylase domain
A6F57_RS08210	SM00247	Beta/gamma crystallins
A6F57_RS08220	SM00487	DEAD-like helicases superfamily
A6F57_RS08220	SM00490	helicase superfamily c-terminal domain
A6F57_RS08310	SM00244	prohibitin homologues
A6F57_RS08315	SM00244	prohibitin homologues
A6F57_RS08335	SM01340	A6F57_RS08335
A6F57_RS08340	SM00257	Lysin motif
A6F57_RS08340	SM00646	A6F57_RS08340
A6F57_RS08455	SM00387	Histidine kinase-like ATPases
A6F57_RS08455	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS08465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS08470	SM00387	Histidine kinase-like ATPases
A6F57_RS08475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS08480	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS08500	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS08560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS08560	SM00866	A6F57_RS08560
A6F57_RS08620	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS08625	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS08650	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS08685	SM00841	Elongation factor P, C-terminal
A6F57_RS08685	SM01185	A6F57_RS08685
A6F57_RS08825	SM00867	YceI-like domain 
A6F57_RS08860	SM00829	Enoylreductase
A6F57_RS08865	SM00267	diguanylate cyclase
A6F57_RS08870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS08870	SM00387	Histidine kinase-like ATPases
A6F57_RS08870	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS08870	SM00448	cheY-homologous receiver domain
A6F57_RS08895	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS09000	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6F57_RS09000	SM01134	A6F57_RS09000
A6F57_RS09010	SM00267	diguanylate cyclase
A6F57_RS09025	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS09025	SM01009	AlkA N-terminal domain
A6F57_RS09055	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6F57_RS09055	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6F57_RS09075	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A6F57_RS09085	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS09085	SM00267	diguanylate cyclase
A6F57_RS09095	SM00883	Chaperonin 10 Kd subunit
A6F57_RS09125	SM00878	Biotin carboxylase C-terminal domain
A6F57_RS09145	SM00479	A6F57_RS09145
A6F57_RS09145	SM00990	A6F57_RS09145
A6F57_RS09170	SM00062	Bacterial periplasmic substrate-binding proteins
A6F57_RS09190	SM00798	AICARFT/IMPCHase bienzyme
A6F57_RS09190	SM00851	MGS-like domain
A6F57_RS09200	SM01209	A6F57_RS09200
A6F57_RS09200	SM01210	A6F57_RS09200
A6F57_RS09240	SM00448	cheY-homologous receiver domain
A6F57_RS09240	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS09245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS09245	SM00387	Histidine kinase-like ATPases
A6F57_RS09245	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS09265	SM00363	S4 RNA-binding domain
A6F57_RS09280	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS09330	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS09360	SM00867	YceI-like domain 
A6F57_RS09395	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS09415	SM00320	WD40 repeats
A6F57_RS09435	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS09435	SM00732	Likely ribonuclease with RNase H fold.
A6F57_RS09460	SM00631	A6F57_RS09460
A6F57_RS09490	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS09490	SM00871	Bacterial transcription activator, effector binding domain
A6F57_RS09575	SM00563	Phosphate acyltransferases
A6F57_RS09665	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A6F57_RS09790	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS09805	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS09815	SM01144	A6F57_RS09815
A6F57_RS09840	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS09880	SM00470	ParB-like nuclease domain
A6F57_RS09895	SM01228	A6F57_RS09895
A6F57_RS09940	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS09940	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6F57_RS09945	SM00480	DNA polymerase III beta subunit
A6F57_RS09955	SM00387	Histidine kinase-like ATPases
A6F57_RS09955	SM00433	TopoisomeraseII
A6F57_RS09970	SM00836	DALR anticodon binding domain
A6F57_RS10005	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6F57_RS10005	SM00474	3'-5' exonuclease
A6F57_RS10005	SM00475	5'-3' exonuclease
A6F57_RS10005	SM00482	DNA polymerase A domain
A6F57_RS10040	SM00257	Lysin motif
A6F57_RS10160	SM00481	DNA polymerase alpha chain like domain
A6F57_RS10260	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6F57_RS10260	SM01232	A6F57_RS10260
A6F57_RS10290	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS10290	SM00267	diguanylate cyclase
A6F57_RS10300	SM00829	Enoylreductase
A6F57_RS10305	SM00450	Rhodanese Homology Domain
A6F57_RS10340	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS10340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS10340	SM00267	diguanylate cyclase
A6F57_RS10385	SM00974	A6F57_RS10385
A6F57_RS10495	SM00989	A6F57_RS10495
A6F57_RS10505	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS10580	SM00346	helix_turn_helix isocitrate lyase regulation
A6F57_RS10590	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A6F57_RS10610	SM00028	Tetratricopeptide repeats
A6F57_RS10615	SM00387	Histidine kinase-like ATPases
A6F57_RS10615	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS10615	SM00448	cheY-homologous receiver domain
A6F57_RS10645	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS10670	SM00849	Metallo-beta-lactamase superfamily
A6F57_RS10700	SM00876	Biotin and Thiamin Synthesis associated domain
A6F57_RS10765	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS10825	SM00267	diguanylate cyclase
A6F57_RS10835	SM00072	Guanylate kinase homologues.
A6F57_RS10840	SM01409	A6F57_RS10840
A6F57_RS10845	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS10845	SM00954	Region found in RelA / SpoT proteins
A6F57_RS10860	SM00487	DEAD-like helicases superfamily
A6F57_RS10860	SM00490	helicase superfamily c-terminal domain
A6F57_RS10895	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS10900	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS10900	SM00267	diguanylate cyclase
A6F57_RS10940	SM00028	Tetratricopeptide repeats
A6F57_RS10940	SM00267	diguanylate cyclase
A6F57_RS10970	SM00271	DnaJ molecular chaperone homology domain
A6F57_RS11005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS11025	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS11025	SM00267	diguanylate cyclase
A6F57_RS11045	SM00341	Helicase and RNase D C-terminal
A6F57_RS11045	SM00487	DEAD-like helicases superfamily
A6F57_RS11045	SM00490	helicase superfamily c-terminal domain
A6F57_RS11045	SM00956	A6F57_RS11045
A6F57_RS11055	SM00924	MgtE intracellular N domain
A6F57_RS11065	SM00267	diguanylate cyclase
A6F57_RS11065	SM00448	cheY-homologous receiver domain
A6F57_RS11075	SM00971	Serine acetyltransferase, N-terminal
A6F57_RS11115	SM00014	Acid phosphatase homologues
A6F57_RS11155	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS11190	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS11230	SM00448	cheY-homologous receiver domain
A6F57_RS11235	SM00073	Histidine Phosphotransfer domain
A6F57_RS11235	SM00387	Histidine kinase-like ATPases
A6F57_RS11235	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS11235	SM00448	cheY-homologous receiver domain
A6F57_RS11245	SM01130	A6F57_RS11245
A6F57_RS11295	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6F57_RS11295	SM01134	A6F57_RS11295
A6F57_RS11330	SM00965	Secretin and TonB N terminus short domain
A6F57_RS11410	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS11430	SM00634	Bacterial Ig-like domain (group 1)
A6F57_RS11445	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS11450	SM01038	Beta galactosidase small chain
A6F57_RS11455	SM00448	cheY-homologous receiver domain
A6F57_RS11455	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS11460	SM00387	Histidine kinase-like ATPases
A6F57_RS11485	SM00478	endonuclease III
A6F57_RS11485	SM00525	A6F57_RS11485
A6F57_RS11515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS11515	SM00387	Histidine kinase-like ATPases
A6F57_RS11515	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS11520	SM00448	cheY-homologous receiver domain
A6F57_RS11520	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS11530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS11535	SM00448	cheY-homologous receiver domain
A6F57_RS11540	SM00073	Histidine Phosphotransfer domain
A6F57_RS11540	SM00260	Two component signalling adaptor domain
A6F57_RS11540	SM00387	Histidine kinase-like ATPases
A6F57_RS11540	SM01231	A6F57_RS11540
A6F57_RS11545	SM00260	Two component signalling adaptor domain
A6F57_RS11550	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS11550	SM00091	PAS domain
A6F57_RS11550	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS11555	SM00138	Methyltransferase, chemotaxis proteins 
A6F57_RS11565	SM00448	cheY-homologous receiver domain
A6F57_RS11595	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS11620	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS11620	SM00387	Histidine kinase-like ATPases
A6F57_RS11620	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS11620	SM00448	cheY-homologous receiver domain
A6F57_RS11640	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS11695	SM00855	Phosphoglycerate mutase family
A6F57_RS11705	SM00671	Sel1-like repeats.
A6F57_RS11710	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS11715	SM01403	A6F57_RS11715
A6F57_RS11735	SM01382	A6F57_RS11735
A6F57_RS11735	SM01383	A6F57_RS11735
A6F57_RS11750	SM00322	K homology RNA-binding domain
A6F57_RS11800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS11800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS11825	SM00487	DEAD-like helicases superfamily
A6F57_RS11825	SM00490	helicase superfamily c-terminal domain
A6F57_RS11855	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS11870	SM00938	Nitrogen regulatory protein P-II
A6F57_RS11890	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
A6F57_RS11925	SM00073	Histidine Phosphotransfer domain
A6F57_RS11925	SM00387	Histidine kinase-like ATPases
A6F57_RS11925	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS11925	SM00448	cheY-homologous receiver domain
A6F57_RS11930	SM00434	DNA Topoisomerase IV
A6F57_RS11940	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS11940	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS11940	SM00267	diguanylate cyclase
A6F57_RS11945	SM01150	A6F57_RS11945
A6F57_RS12020	SM00965	Secretin and TonB N terminus short domain
A6F57_RS12040	SM00842	Cell division protein FtsA
A6F57_RS12050	SM00919	Malic enzyme, NAD binding domain
A6F57_RS12050	SM01274	A6F57_RS12050
A6F57_RS12080	SM00028	Tetratricopeptide repeats
A6F57_RS12120	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6F57_RS12125	SM00851	MGS-like domain
A6F57_RS12150	SM00448	cheY-homologous receiver domain
A6F57_RS12150	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS12155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS12155	SM00387	Histidine kinase-like ATPases
A6F57_RS12155	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS12185	SM00450	Rhodanese Homology Domain
A6F57_RS12230	SM00479	A6F57_RS12230
A6F57_RS12250	SM00028	Tetratricopeptide repeats
A6F57_RS12305	SM00267	diguanylate cyclase
A6F57_RS12310	SM01004	Delta-aminolevulinic acid dehydratase
A6F57_RS12320	SM00487	DEAD-like helicases superfamily
A6F57_RS12320	SM00490	helicase superfamily c-terminal domain
A6F57_RS12330	SM00357	Cold shock protein domain
A6F57_RS12330	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS12330	SM00959	Rho termination factor, N-terminal domain
A6F57_RS12340	SM00387	Histidine kinase-like ATPases
A6F57_RS12340	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS12340	SM00448	cheY-homologous receiver domain
A6F57_RS12350	SM01001	AIR carboxylase
A6F57_RS12400	SM00788	Adenylosuccinate synthetase
A6F57_RS12450	SM01005	Alanine racemase, C-terminal domain
A6F57_RS12475	SM00062	Bacterial periplasmic substrate-binding proteins
A6F57_RS12500	SM00360	RNA recognition motif
A6F57_RS12510	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS12600	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS12605	SM00901	A6F57_RS12605
A6F57_RS12705	SM00257	Lysin motif
A6F57_RS12750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS12750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS12750	SM01049	A6F57_RS12750
A6F57_RS12775	SM00448	cheY-homologous receiver domain
A6F57_RS12775	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS12780	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS12785	SM00287	Bacterial SH3 domain homologues
A6F57_RS12790	SM01118	A6F57_RS12790
A6F57_RS12800	SM00927	DNA mismatch repair enzyme MutH
A6F57_RS12810	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS12830	SM00448	cheY-homologous receiver domain
A6F57_RS12835	SM00267	diguanylate cyclase
A6F57_RS12840	SM00387	Histidine kinase-like ATPases
A6F57_RS12840	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS12840	SM00448	cheY-homologous receiver domain
A6F57_RS12865	SM00487	DEAD-like helicases superfamily
A6F57_RS12865	SM00490	helicase superfamily c-terminal domain
A6F57_RS12870	SM00670	Large family of predicted nucleotide-binding domains
A6F57_RS12880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS12880	SM00895	A6F57_RS12880
A6F57_RS12900	SM00829	Enoylreductase
A6F57_RS12925	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS12960	SM00346	helix_turn_helix isocitrate lyase regulation
A6F57_RS12965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6F57_RS12965	SM00895	A6F57_RS12965
A6F57_RS12985	SM00028	Tetratricopeptide repeats
A6F57_RS13055	SM00635	Bacterial Ig-like domain 2
A6F57_RS13080	SM00487	DEAD-like helicases superfamily
A6F57_RS13080	SM00490	helicase superfamily c-terminal domain
A6F57_RS13085	SM00028	Tetratricopeptide repeats
A6F57_RS13120	SM00387	Histidine kinase-like ATPases
A6F57_RS13120	SM00433	TopoisomeraseII
A6F57_RS13125	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS13125	SM00091	PAS domain
A6F57_RS13125	SM00138	Methyltransferase, chemotaxis proteins 
A6F57_RS13125	SM00267	diguanylate cyclase
A6F57_RS13130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS13160	SM00841	Elongation factor P, C-terminal
A6F57_RS13160	SM01185	A6F57_RS13160
A6F57_RS13205	SM00014	Acid phosphatase homologues
A6F57_RS13215	SM01012	A6F57_RS13215
A6F57_RS13240	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6F57_RS13255	SM00091	PAS domain
A6F57_RS13255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS13270	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS13340	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A6F57_RS13345	SM01007	Class II Aldolase and Adducin N-terminal domain
A6F57_RS13375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS13375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS13385	SM00400	zinc finger
A6F57_RS13385	SM00493	A6F57_RS13385
A6F57_RS13385	SM00766	DNA primase DnaG DnaB-binding
A6F57_RS13410	SM01207	A6F57_RS13410
A6F57_RS13415	SM00905	Dihydroneopterin aldolase
A6F57_RS13450	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS13460	SM00387	Histidine kinase-like ATPases
A6F57_RS13465	SM00448	cheY-homologous receiver domain
A6F57_RS13465	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS13470	SM00387	Histidine kinase-like ATPases
A6F57_RS13470	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS13480	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS13485	SM00710	Parallel beta-helix repeats
A6F57_RS13520	SM00028	Tetratricopeptide repeats
A6F57_RS13530	SM00448	cheY-homologous receiver domain
A6F57_RS13530	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS13535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS13535	SM00091	PAS domain
A6F57_RS13535	SM00387	Histidine kinase-like ATPases
A6F57_RS13535	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS13535	SM00448	cheY-homologous receiver domain
A6F57_RS13580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS13580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS13595	SM00650	Ribosomal RNA adenine dimethylases
A6F57_RS13615	SM00271	DnaJ molecular chaperone homology domain
A6F57_RS13660	SM00954	Region found in RelA / SpoT proteins
A6F57_RS13700	SM00965	Secretin and TonB N terminus short domain
A6F57_RS13705	SM00631	A6F57_RS13705
A6F57_RS13755	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6F57_RS13755	SM00924	MgtE intracellular N domain
A6F57_RS13785	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS13815	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS13850	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6F57_RS13855	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6F57_RS13880	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS13910	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS13910	SM00267	diguanylate cyclase
A6F57_RS13915	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS13915	SM00387	Histidine kinase-like ATPases
A6F57_RS13915	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS13915	SM00448	cheY-homologous receiver domain
A6F57_RS13925	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS13945	SM01118	A6F57_RS13945
A6F57_RS13955	SM00861	Transketolase, pyrimidine binding domain
A6F57_RS13960	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6F57_RS14005	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14055	SM00267	diguanylate cyclase
A6F57_RS14075	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS14095	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS14110	SM00758	A6F57_RS14110
A6F57_RS14110	SM01217	A6F57_RS14110
A6F57_RS14115	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6F57_RS14125	SM01263	A6F57_RS14125
A6F57_RS14140	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS14140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS14155	SM00267	diguanylate cyclase
A6F57_RS14180	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14290	SM00448	cheY-homologous receiver domain
A6F57_RS14295	SM00091	PAS domain
A6F57_RS14315	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS14325	SM00487	DEAD-like helicases superfamily
A6F57_RS14325	SM00490	helicase superfamily c-terminal domain
A6F57_RS14335	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14360	SM01329	A6F57_RS14360
A6F57_RS14365	SM00917	LeuA allosteric (dimerisation) domain
A6F57_RS14385	SM01192	A6F57_RS14385
A6F57_RS14385	SM01193	A6F57_RS14385
A6F57_RS14395	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6F57_RS14395	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6F57_RS14405	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14410	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14435	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14505	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS14545	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6F57_RS14550	SM01329	A6F57_RS14550
A6F57_RS14570	SM00267	diguanylate cyclase
A6F57_RS14660	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS14705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6F57_RS14715	SM00935	Outer membrane protein (OmpH-like)
A6F57_RS14740	SM00481	DNA polymerase alpha chain like domain
A6F57_RS14750	SM00977	TilS substrate C-terminal domain
A6F57_RS14755	SM00267	diguanylate cyclase
A6F57_RS14775	SM00062	Bacterial periplasmic substrate-binding proteins
A6F57_RS14780	SM01211	A6F57_RS14780
A6F57_RS14785	SM00463	Small MutS-related domain
A6F57_RS14790	SM00062	Bacterial periplasmic substrate-binding proteins
A6F57_RS14790	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6F57_RS14800	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A6F57_RS14820	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS14825	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS14855	SM00858	A6F57_RS14855
A6F57_RS14860	SM00260	Two component signalling adaptor domain
A6F57_RS14860	SM00448	cheY-homologous receiver domain
A6F57_RS14865	SM00138	Methyltransferase, chemotaxis proteins 
A6F57_RS14910	SM00047	Lysozyme subfamily 2
A6F57_RS15045	SM00822	A6F57_RS15045
A6F57_RS15065	SM00858	A6F57_RS15065
A6F57_RS15095	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15100	SM00387	Histidine kinase-like ATPases
A6F57_RS15100	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS15105	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15105	SM00448	cheY-homologous receiver domain
A6F57_RS15130	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15190	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15190	SM00962	SRP54-type protein, GTPase domain
A6F57_RS15205	SM00448	cheY-homologous receiver domain
A6F57_RS15215	SM00073	Histidine Phosphotransfer domain
A6F57_RS15215	SM00260	Two component signalling adaptor domain
A6F57_RS15215	SM00387	Histidine kinase-like ATPases
A6F57_RS15215	SM01231	A6F57_RS15215
A6F57_RS15220	SM00448	cheY-homologous receiver domain
A6F57_RS15230	SM00260	Two component signalling adaptor domain
A6F57_RS15235	SM00260	Two component signalling adaptor domain
A6F57_RS15255	SM01018	B12 binding domain
A6F57_RS15275	SM00947	Carbonic anhydrase
A6F57_RS15310	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6F57_RS15355	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15360	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15380	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15405	SM00091	PAS domain
A6F57_RS15405	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15420	SM00344	helix_turn_helix ASNC type
A6F57_RS15425	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A6F57_RS15460	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS15475	SM00028	Tetratricopeptide repeats
A6F57_RS15480	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
A6F57_RS15510	SM00028	Tetratricopeptide repeats
A6F57_RS15580	SM00836	DALR anticodon binding domain
A6F57_RS15580	SM01016	Arginyl tRNA synthetase N terminal dom
A6F57_RS15585	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS15585	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS15585	SM00091	PAS domain
A6F57_RS15585	SM00267	diguanylate cyclase
A6F57_RS15620	SM00937	A6F57_RS15620
A6F57_RS15660	SM01321	A6F57_RS15660
A6F57_RS15670	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15685	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS15685	SM00448	cheY-homologous receiver domain
A6F57_RS15690	SM00387	Histidine kinase-like ATPases
A6F57_RS15695	SM00463	Small MutS-related domain
A6F57_RS15730	SM00763	PrkA AAA domain
A6F57_RS15760	SM00965	Secretin and TonB N terminus short domain
A6F57_RS15775	SM00479	A6F57_RS15775
A6F57_RS15795	SM00357	Cold shock protein domain
A6F57_RS15805	SM00267	diguanylate cyclase
A6F57_RS15810	SM00028	Tetratricopeptide repeats
A6F57_RS15830	SM00478	endonuclease III
A6F57_RS15830	SM00525	A6F57_RS15830
A6F57_RS15840	SM00900	A6F57_RS15840
A6F57_RS15880	SM00487	DEAD-like helicases superfamily
A6F57_RS15880	SM00490	helicase superfamily c-terminal domain
A6F57_RS15970	SM00267	diguanylate cyclase
A6F57_RS15995	SM00028	Tetratricopeptide repeats
A6F57_RS16000	SM00327	von Willebrand factor (vWF) type A domain
A6F57_RS16035	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS16035	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS16035	SM00091	PAS domain
A6F57_RS16035	SM00267	diguanylate cyclase
A6F57_RS16045	SM00855	Phosphoglycerate mutase family
A6F57_RS16055	SM01091	Transporter associated domain
A6F57_RS16065	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16065	SM00962	SRP54-type protein, GTPase domain
A6F57_RS16065	SM00963	SRP54-type protein, helical bundle domain
A6F57_RS16110	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16170	SM00830	Chorismate mutase type II
A6F57_RS16175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS16175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS16180	SM00830	Chorismate mutase type II
A6F57_RS16185	SM00448	cheY-homologous receiver domain
A6F57_RS16200	SM00331	Sigma factor PP2C-like phosphatases
A6F57_RS16200	SM00448	cheY-homologous receiver domain
A6F57_RS16210	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS16210	SM00267	diguanylate cyclase
A6F57_RS16220	SM00387	Histidine kinase-like ATPases
A6F57_RS16220	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS16230	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16230	SM00448	cheY-homologous receiver domain
A6F57_RS16235	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS16260	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6F57_RS16265	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16300	SM00028	Tetratricopeptide repeats
A6F57_RS16375	SM00267	diguanylate cyclase
A6F57_RS16425	SM00028	Tetratricopeptide repeats
A6F57_RS16425	SM00387	Histidine kinase-like ATPases
A6F57_RS16425	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS16425	SM00448	cheY-homologous receiver domain
A6F57_RS16455	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6F57_RS16480	SM00829	Enoylreductase
A6F57_RS16485	SM00829	Enoylreductase
A6F57_RS16490	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6F57_RS16495	SM00479	A6F57_RS16495
A6F57_RS16540	SM00267	diguanylate cyclase
A6F57_RS16605	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS16605	SM00876	Biotin and Thiamin Synthesis associated domain
A6F57_RS16630	SM00226	Low molecular weight phosphatase family
A6F57_RS16640	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16660	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16665	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS16675	SM00028	Tetratricopeptide repeats
A6F57_RS16675	SM00448	cheY-homologous receiver domain
A6F57_RS16740	SM01321	A6F57_RS16740
A6F57_RS16755	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS16770	SM00905	Dihydroneopterin aldolase
A6F57_RS16780	SM00387	Histidine kinase-like ATPases
A6F57_RS16785	SM00448	cheY-homologous receiver domain
A6F57_RS16785	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS16835	SM00481	DNA polymerase alpha chain like domain
A6F57_RS16855	SM00363	S4 RNA-binding domain
A6F57_RS16870	SM01266	A6F57_RS16870
A6F57_RS16935	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS16935	SM00448	cheY-homologous receiver domain
A6F57_RS16940	SM00387	Histidine kinase-like ATPases
A6F57_RS16940	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS16940	SM00448	cheY-homologous receiver domain
A6F57_RS16955	SM00271	DnaJ molecular chaperone homology domain
A6F57_RS16965	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS16965	SM00091	PAS domain
A6F57_RS16985	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6F57_RS16990	SM00851	MGS-like domain
A6F57_RS16990	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6F57_RS17000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS17000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS17040	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6F57_RS17040	SM01091	Transporter associated domain
A6F57_RS17055	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS17075	SM00903	Flavin reductase like domain
A6F57_RS17125	SM00829	Enoylreductase
A6F57_RS17135	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS17135	SM00267	diguanylate cyclase
A6F57_RS17140	SM01400	A6F57_RS17140
A6F57_RS17165	SM00937	A6F57_RS17165
A6F57_RS17215	SM00838	Elongation factor G C-terminus
A6F57_RS17215	SM00889	Elongation factor G, domain IV
A6F57_RS17220	SM01116	A6F57_RS17220
A6F57_RS17225	SM00331	Sigma factor PP2C-like phosphatases
A6F57_RS17225	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6F57_RS17235	SM00460	Transglutaminase/protease-like homologues
A6F57_RS17265	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS17265	SM00267	diguanylate cyclase
A6F57_RS17345	SM00028	Tetratricopeptide repeats
A6F57_RS17345	SM00267	diguanylate cyclase
A6F57_RS17365	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS17365	SM00091	PAS domain
A6F57_RS17365	SM00267	diguanylate cyclase
A6F57_RS17395	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A6F57_RS17400	SM01092	CO dehydrogenase flavoprotein C-terminal domain
A6F57_RS17435	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS17435	SM00091	PAS domain
A6F57_RS17435	SM00267	diguanylate cyclase
A6F57_RS17435	SM00448	cheY-homologous receiver domain
A6F57_RS17440	SM00267	diguanylate cyclase
A6F57_RS17440	SM00448	cheY-homologous receiver domain
A6F57_RS17445	SM00387	Histidine kinase-like ATPases
A6F57_RS17445	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS17445	SM00448	cheY-homologous receiver domain
A6F57_RS17530	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6F57_RS17600	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS17600	SM00267	diguanylate cyclase
A6F57_RS17650	SM00710	Parallel beta-helix repeats
A6F57_RS17680	SM00873	B3/4 domain
A6F57_RS17680	SM00874	tRNA synthetase B5 domain
A6F57_RS17680	SM00896	Ferredoxin-fold anticodon binding domain
A6F57_RS17685	SM00411	bacterial (prokaryotic) histone like domain
A6F57_RS17725	SM00487	DEAD-like helicases superfamily
A6F57_RS17725	SM00490	helicase superfamily c-terminal domain
A6F57_RS17725	SM00982	A6F57_RS17725
A6F57_RS17725	SM01058	CarD-like/TRCF domain
A6F57_RS17815	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS17815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS17815	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
A6F57_RS17815	SM00091	PAS domain
A6F57_RS17815	SM00267	diguanylate cyclase
A6F57_RS17820	SM01321	A6F57_RS17820
A6F57_RS17830	SM00878	Biotin carboxylase C-terminal domain
A6F57_RS17850	SM00422	helix_turn_helix, mercury resistance
A6F57_RS17860	SM00062	Bacterial periplasmic substrate-binding proteins
A6F57_RS17860	SM00267	diguanylate cyclase
A6F57_RS17870	SM00479	A6F57_RS17870
A6F57_RS17875	SM00387	Histidine kinase-like ATPases
A6F57_RS17875	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS17875	SM00448	cheY-homologous receiver domain
A6F57_RS17880	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6F57_RS17900	SM00267	diguanylate cyclase
A6F57_RS17905	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS17915	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS17915	SM00487	DEAD-like helicases superfamily
A6F57_RS17915	SM00490	helicase superfamily c-terminal domain
A6F57_RS17915	SM00847	Helicase associated domain (HA2)  Add an annotation
A6F57_RS17930	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A6F57_RS17935	SM00829	Enoylreductase
A6F57_RS17945	SM00479	A6F57_RS17945
A6F57_RS17975	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS17980	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS17995	SM00634	Bacterial Ig-like domain (group 1)
A6F57_RS18005	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6F57_RS18005	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6F57_RS18005	SM00493	A6F57_RS18005
A6F57_RS18075	SM00587	ZnF_C4 abd HLH domain containing kinases domain
A6F57_RS18080	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS18085	SM00363	S4 RNA-binding domain
A6F57_RS18120	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6F57_RS18125	SM00822	A6F57_RS18125
A6F57_RS18135	SM00825	Beta-ketoacyl synthase
A6F57_RS18175	SM00267	diguanylate cyclase
A6F57_RS18240	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A6F57_RS18260	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS18290	SM00710	Parallel beta-helix repeats
A6F57_RS18410	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
A6F57_RS18415	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
A6F57_RS18445	SM00357	Cold shock protein domain
A6F57_RS18455	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS18455	SM01086	C-terminal, D2-small domain, of ClpB protein
A6F57_RS18460	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS18490	SM00731	SprT homologues.
A6F57_RS18520	SM00870	A6F57_RS18520
A6F57_RS18530	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6F57_RS18545	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6F57_RS18605	SM01103	A6F57_RS18605
A6F57_RS18615	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS18645	SM00052	Putative diguanylate phosphodiesterase
A6F57_RS18645	SM00267	diguanylate cyclase
A6F57_RS18645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS18655	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6F57_RS18655	SM00195	Dual specificity phosphatase, catalytic domain
A6F57_RS18695	SM00507	HNH nucleases
A6F57_RS18700	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS18700	SM00322	K homology RNA-binding domain
A6F57_RS18710	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS18790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS18795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6F57_RS18845	SM00796	Allophanate hydrolase subunit 1
A6F57_RS18850	SM00797	Allophanate hydrolase subunit 2
A6F57_RS18860	SM00354	helix_turn _helix lactose operon repressor
A6F57_RS18880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
A6F57_RS18880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6F57_RS18900	SM00528	Domain in histone-like proteins of HNS family
A6F57_RS18910	SM00893	Electron transfer flavoprotein domain
A6F57_RS18915	SM00893	Electron transfer flavoprotein domain
A6F57_RS18945	SM00342	helix_turn_helix, arabinose operon control protein
A6F57_RS18980	SM00563	Phosphate acyltransferases
A6F57_RS19025	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS19045	SM00852	Probable molybdopterin binding domain
A6F57_RS19050	SM00642	Alpha-amylase domain
A6F57_RS19080	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS19080	SM00448	cheY-homologous receiver domain
A6F57_RS19165	SM01130	A6F57_RS19165
A6F57_RS19205	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS19295	SM01321	A6F57_RS19295
A6F57_RS19315	SM00422	helix_turn_helix, mercury resistance
A6F57_RS19330	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS19355	SM00448	cheY-homologous receiver domain
A6F57_RS19355	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS19360	SM00387	Histidine kinase-like ATPases
A6F57_RS19360	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS19385	SM00434	DNA Topoisomerase IV
A6F57_RS19405	SM00316	Ribosomal protein S1-like RNA-binding domain
A6F57_RS19410	SM00411	bacterial (prokaryotic) histone like domain
A6F57_RS19425	SM00028	Tetratricopeptide repeats
A6F57_RS19430	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6F57_RS19435	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6F57_RS19435	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6F57_RS19440	SM00344	helix_turn_helix ASNC type
A6F57_RS19445	SM00843	A6F57_RS19445
A6F57_RS19455	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS19520	SM00448	cheY-homologous receiver domain
A6F57_RS19520	SM00862	Transcriptional regulatory protein, C terminal
A6F57_RS19525	SM00388	His Kinase A (phosphoacceptor) domain
A6F57_RS19575	SM00421	helix_turn_helix, Lux Regulon
A6F57_RS19575	SM00448	cheY-homologous receiver domain
A6F57_RS19580	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6F57_RS19580	SM00465	GIY-YIG type nucleases (URI domain)
A6F57_RS19685	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS19690	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS19875	SM01144	A6F57_RS19875
A6F57_RS19885	SM00450	Rhodanese Homology Domain
A6F57_RS19905	SM00047	Lysozyme subfamily 2
A6F57_RS19930	SM00100	Cyclic nucleotide-monophosphate binding domain
A6F57_RS19930	SM00419	helix_turn_helix, cAMP Regulatory protein
A6F57_RS20035	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS20050	SM00530	Helix-turn-helix XRE-family like proteins 
A6F57_RS20100	SM00382	ATPases associated with a variety of cellular activities
A6F57_RS20110	SM00981	A6F57_RS20110
A6F57_RS20165	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6F57_RS20165	SM00245	tail specific protease
A6F57_RS20170	SM00945	ProQ/FINO family
A6F57_RS20180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6F57_RS20205	SM00220	Serine/Threonine protein kinases, catalytic domain
A6F57_RS20220	SM00861	Transketolase, pyrimidine binding domain
A6F57_RS20265	SM00387	Histidine kinase-like ATPases
A6F57_RS20280	SM00882	Coenzyme A transferase
A6F57_RS20285	SM00882	Coenzyme A transferase
