locus-tag class description ALE3EI_RS00005 PF11638 DnaA N-terminal domain ALE3EI_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ALE3EI_RS00005 PF00308 Bacterial dnaA protein ALE3EI_RS00010 PF01451 Low molecular weight phosphotyrosine protein phosphatase ALE3EI_RS00020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALE3EI_RS00035 PF02618 YceG-like family ALE3EI_RS00045 PF01678 Diaminopimelate epimerase ALE3EI_RS00050 PF17820 PDZ domain ALE3EI_RS00050 PF13180 PDZ domain ALE3EI_RS00055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALE3EI_RS00055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALE3EI_RS00060 PF00583 Acetyltransferase (GNAT) family ALE3EI_RS00070 PF01746 tRNA (Guanine-1)-methyltransferase ALE3EI_RS00075 PF01245 Ribosomal protein L19 ALE3EI_RS00080 PF03971 Monomeric isocitrate dehydrogenase ALE3EI_RS00085 PF13580 SIS domain ALE3EI_RS00125 PF03129 Anticodon binding domain ALE3EI_RS00125 PF02824 TGS domain ALE3EI_RS00125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALE3EI_RS00125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALE3EI_RS00130 PF05198 Translation initiation factor IF-3, N-terminal domain ALE3EI_RS00130 PF00707 Translation initiation factor IF-3, C-terminal domain ALE3EI_RS00135 PF01632 Ribosomal protein L35 ALE3EI_RS00140 PF00453 Ribosomal protein L20 ALE3EI_RS00185 PF01578 Cytochrome C assembly protein ALE3EI_RS00185 PF05140 ResB-like family ALE3EI_RS00190 PF03796 DnaB-like helicase C terminal domain ALE3EI_RS00190 PF00772 DnaB-like helicase N terminal domain ALE3EI_RS00195 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ALE3EI_RS00210 PF01702 Queuine tRNA-ribosyltransferase ALE3EI_RS00220 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS00220 PF02780 Transketolase, C-terminal domain ALE3EI_RS00230 PF01479 S4 domain ALE3EI_RS00235 PF00156 Phosphoribosyl transferase domain ALE3EI_RS00240 PF01202 Shikimate kinase ALE3EI_RS00260 PF01593 Flavin containing amine oxidoreductase ALE3EI_RS00280 PF08534 Redoxin ALE3EI_RS00290 PF00330 Aconitase family (aconitate hydratase) ALE3EI_RS00290 PF00694 Aconitase C-terminal domain ALE3EI_RS00295 PF01757 Acyltransferase family ALE3EI_RS00300 PF17863 AAA lid domain ALE3EI_RS00300 PF07726 ATPase family associated with various cellular activities (AAA) ALE3EI_RS00335 PF00478 IMP dehydrogenase / GMP reductase domain ALE3EI_RS00335 PF00571 CBS domain ALE3EI_RS00360 PF02872 5'-nucleotidase, C-terminal domain ALE3EI_RS00360 PF17936 Bacterial Ig domain ALE3EI_RS00360 PF00149 Calcineurin-like phosphoesterase ALE3EI_RS00365 PF00682 HMGL-like ALE3EI_RS00370 PF01810 LysE type translocator ALE3EI_RS00375 PF01180 Dihydroorotate dehydrogenase ALE3EI_RS00380 PF07687 Peptidase dimerisation domain ALE3EI_RS00380 PF01546 Peptidase family M20/M25/M40 ALE3EI_RS00385 PF02699 Preprotein translocase subunit ALE3EI_RS00395 PF01029 NusB family ALE3EI_RS00400 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALE3EI_RS00400 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALE3EI_RS00405 PF00664 ABC transporter transmembrane region ALE3EI_RS00405 PF00005 ABC transporter ALE3EI_RS00420 PF01740 STAS domain ALE3EI_RS00420 PF00916 Sulfate permease family ALE3EI_RS00440 PF03062 MBOAT, membrane-bound O-acyltransferase family ALE3EI_RS00450 PF04264 YceI-like domain ALE3EI_RS00455 PF01588 Putative tRNA binding domain ALE3EI_RS00470 PF12867 DinB superfamily ALE3EI_RS00475 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALE3EI_RS00480 PF16124 RecQ zinc-binding ALE3EI_RS00480 PF09382 RQC domain ALE3EI_RS00480 PF00570 HRDC domain ALE3EI_RS00480 PF00270 DEAD/DEAH box helicase ALE3EI_RS00480 PF00271 Helicase conserved C-terminal domain ALE3EI_RS00485 PF01380 SIS domain ALE3EI_RS00485 PF00571 CBS domain ALE3EI_RS00490 PF00902 Sec-independent protein translocase protein (TatC) ALE3EI_RS00500 PF00005 ABC transporter ALE3EI_RS00500 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALE3EI_RS00505 PF01066 CDP-alcohol phosphatidyltransferase ALE3EI_RS00520 PF02397 Bacterial sugar transferase ALE3EI_RS00525 PF00534 Glycosyl transferases group 1 ALE3EI_RS00545 PF13439 Glycosyltransferase Family 4 ALE3EI_RS00545 PF00534 Glycosyl transferases group 1 ALE3EI_RS00560 PF03062 MBOAT, membrane-bound O-acyltransferase family ALE3EI_RS00565 PF02348 Cytidylyltransferase ALE3EI_RS00570 PF02350 UDP-N-acetylglucosamine 2-epimerase ALE3EI_RS00575 PF08666 SAF domain ALE3EI_RS00575 PF03102 NeuB family ALE3EI_RS00580 PF00534 Glycosyl transferases group 1 ALE3EI_RS00580 PF13439 Glycosyltransferase Family 4 ALE3EI_RS00590 PF16363 GDP-mannose 4,6 dehydratase ALE3EI_RS00595 PF00535 Glycosyl transferase family 2 ALE3EI_RS00605 PF00535 Glycosyl transferase family 2 ALE3EI_RS00615 PF00483 Nucleotidyl transferase ALE3EI_RS00620 PF16363 GDP-mannose 4,6 dehydratase ALE3EI_RS00625 PF00534 Glycosyl transferases group 1 ALE3EI_RS00625 PF13439 Glycosyltransferase Family 4 ALE3EI_RS00635 PF00535 Glycosyl transferase family 2 ALE3EI_RS00660 PF00005 ABC transporter ALE3EI_RS00675 PF04480 Protein of unknown function (DUF559) ALE3EI_RS00680 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS00685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALE3EI_RS00685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALE3EI_RS00685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALE3EI_RS00690 PF02397 Bacterial sugar transferase ALE3EI_RS00695 PF13614 AAA domain ALE3EI_RS00695 PF02706 Chain length determinant protein ALE3EI_RS00695 PF13807 G-rich domain on putative tyrosine kinase ALE3EI_RS00705 PF00005 ABC transporter ALE3EI_RS00705 PF16326 ABC transporter C-terminal domain ALE3EI_RS00705 PF12848 ABC transporter ALE3EI_RS00715 PF12704 MacB-like periplasmic core domain ALE3EI_RS00715 PF00005 ABC transporter ALE3EI_RS00715 PF02687 FtsX-like permease family ALE3EI_RS00730 PF01923 Cobalamin adenosyltransferase ALE3EI_RS00740 PF07517 SecA DEAD-like domain ALE3EI_RS00740 PF01043 SecA preprotein cross-linking domain ALE3EI_RS00740 PF07516 SecA Wing and Scaffold domain ALE3EI_RS00775 PF08281 Sigma-70, region 4 ALE3EI_RS00775 PF04542 Sigma-70 region 2 ALE3EI_RS00795 PF04542 Sigma-70 region 2 ALE3EI_RS00795 PF08281 Sigma-70, region 4 ALE3EI_RS00805 PF02566 OsmC-like protein ALE3EI_RS00815 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS00820 PF00535 Glycosyl transferase family 2 ALE3EI_RS00835 PF01569 PAP2 superfamily ALE3EI_RS00845 PF01554 MatE ALE3EI_RS00865 PF03976 Polyphosphate kinase 2 (PPK2) ALE3EI_RS00870 PF00158 Sigma-54 interaction domain ALE3EI_RS00870 PF00072 Response regulator receiver domain ALE3EI_RS00870 PF02954 Bacterial regulatory protein, Fis family ALE3EI_RS00880 PF12794 Mechanosensitive ion channel inner membrane domain 1 ALE3EI_RS00880 PF12795 Mechanosensitive ion channel porin domain ALE3EI_RS00880 PF00924 Mechanosensitive ion channel ALE3EI_RS00890 PF00005 ABC transporter ALE3EI_RS00890 PF13732 Domain of unknown function (DUF4162) ALE3EI_RS00895 PF01556 DnaJ C terminal domain ALE3EI_RS00895 PF00684 DnaJ central domain ALE3EI_RS00895 PF00226 DnaJ domain ALE3EI_RS00900 PF01025 GrpE ALE3EI_RS00910 PF08338 Domain of unknown function (DUF1731) ALE3EI_RS00910 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS00915 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_RS00915 PF01266 FAD dependent oxidoreductase ALE3EI_RS00925 PF01063 Amino-transferase class IV ALE3EI_RS00945 PF13492 GAF domain ALE3EI_RS00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS00945 PF07730 Histidine kinase ALE3EI_RS00950 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS00950 PF00072 Response regulator receiver domain ALE3EI_RS00970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ALE3EI_RS00980 PF01965 DJ-1/PfpI family ALE3EI_RS00980 PF12833 Helix-turn-helix domain ALE3EI_RS00985 PF01037 Lrp/AsnC ligand binding domain ALE3EI_RS00995 PF01642 Methylmalonyl-CoA mutase ALE3EI_RS00995 PF02310 B12 binding domain ALE3EI_RS01020 PF01497 Periplasmic binding protein ALE3EI_RS01025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ALE3EI_RS01030 PF03462 PCRF domain ALE3EI_RS01030 PF00472 RF-1 domain ALE3EI_RS01035 PF02769 AIR synthase related protein, C-terminal domain ALE3EI_RS01035 PF00586 AIR synthase related protein, N-terminal domain ALE3EI_RS01045 PF03783 Curli production assembly/transport component CsgG ALE3EI_RS01050 PF10614 Type VIII secretion system (T8SS), CsgF protein ALE3EI_RS01070 PF12437 Glutamine synthetase type III N terminal ALE3EI_RS01070 PF18318 Glutamine synthetase C-terminal domain ALE3EI_RS01070 PF00120 Glutamine synthetase, catalytic domain ALE3EI_RS01075 PF01699 Sodium/calcium exchanger protein ALE3EI_RS01095 PF00156 Phosphoribosyl transferase domain ALE3EI_RS01130 PF00121 Triosephosphate isomerase ALE3EI_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component ALE3EI_RS01150 PF00809 Pterin binding enzyme ALE3EI_RS01155 PF02457 DisA bacterial checkpoint controller nucleotide-binding ALE3EI_RS01165 PF00664 ABC transporter transmembrane region ALE3EI_RS01165 PF00005 ABC transporter ALE3EI_RS01170 PF01416 tRNA pseudouridine synthase ALE3EI_RS01185 PF07497 Rho termination factor, RNA-binding domain ALE3EI_RS01185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALE3EI_RS01205 PF00293 NUDIX domain ALE3EI_RS01210 PF00156 Phosphoribosyl transferase domain ALE3EI_RS01220 PF08279 HTH domain ALE3EI_RS01220 PF03099 Biotin/lipoate A/B protein ligase family ALE3EI_RS01220 PF02237 Biotin protein ligase C terminal domain ALE3EI_RS01230 PF17862 AAA+ lid domain ALE3EI_RS01230 PF00004 ATPase family associated with various cellular activities (AAA) ALE3EI_RS01230 PF01434 Peptidase family M41 ALE3EI_RS01245 PF02666 Phosphatidylserine decarboxylase ALE3EI_RS01260 PF08264 Anticodon-binding domain of tRNA ALE3EI_RS01260 PF00133 tRNA synthetases class I (I, L, M and V) ALE3EI_RS01260 PF10458 Valyl tRNA synthetase tRNA binding arm ALE3EI_RS01270 PF17820 PDZ domain ALE3EI_RS01270 PF02163 Peptidase family M50 ALE3EI_RS01275 PF00155 Aminotransferase class I and II ALE3EI_RS01280 PF01565 FAD binding domain ALE3EI_RS01280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ALE3EI_RS01285 PF02469 Fasciclin domain ALE3EI_RS01295 PF00535 Glycosyl transferase family 2 ALE3EI_RS01310 PF04055 Radical SAM superfamily ALE3EI_RS01315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALE3EI_RS01315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALE3EI_RS01320 PF00072 Response regulator receiver domain ALE3EI_RS01320 PF01627 Hpt domain ALE3EI_RS01320 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS01320 PF17149 Periplasmic sensor domain found in signal transduction proteins ALE3EI_RS01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS01320 PF00672 HAMP domain ALE3EI_RS01325 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ALE3EI_RS01330 PF01784 NIF3 (NGG1p interacting factor 3) ALE3EI_RS01340 PF01625 Peptide methionine sulfoxide reductase ALE3EI_RS01370 PF00266 Aminotransferase class-V ALE3EI_RS01375 PF01494 FAD binding domain ALE3EI_RS01380 PF01042 Endoribonuclease L-PSP ALE3EI_RS01385 PF00171 Aldehyde dehydrogenase family ALE3EI_RS01400 PF01596 O-methyltransferase ALE3EI_RS01405 PF01569 PAP2 superfamily ALE3EI_RS01410 PF02416 mttA/Hcf106 family ALE3EI_RS01435 PF03575 Peptidase family S51 ALE3EI_RS01440 PF02557 D-alanyl-D-alanine carboxypeptidase ALE3EI_RS01445 PF01435 Peptidase family M48 ALE3EI_RS01450 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ALE3EI_RS01450 PF01676 Metalloenzyme superfamily ALE3EI_RS01460 PF00557 Metallopeptidase family M24 ALE3EI_RS01465 PF01209 ubiE/COQ5 methyltransferase family ALE3EI_RS01470 PF02424 ApbE family ALE3EI_RS01485 PF00111 2Fe-2S iron-sulfur cluster binding domain ALE3EI_RS01485 PF00970 Oxidoreductase FAD-binding domain ALE3EI_RS01485 PF00175 Oxidoreductase NAD-binding domain ALE3EI_RS01490 PF02508 Rnf-Nqr subunit, membrane protein ALE3EI_RS01495 PF02508 Rnf-Nqr subunit, membrane protein ALE3EI_RS01500 PF04205 FMN-binding domain ALE3EI_RS01505 PF03116 NQR2, RnfD, RnfE family ALE3EI_RS01510 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ALE3EI_RS01510 PF11973 NQRA C-terminal domain ALE3EI_RS01525 PF04379 ApaG domain ALE3EI_RS01540 PF07494 Two component regulator propeller ALE3EI_RS01540 PF12833 Helix-turn-helix domain ALE3EI_RS01540 PF00072 Response regulator receiver domain ALE3EI_RS01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS01540 PF07495 Y_Y_Y domain ALE3EI_RS01540 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS01550 PF00171 Aldehyde dehydrogenase family ALE3EI_RS01555 PF00293 NUDIX domain ALE3EI_RS01560 PF02527 rRNA small subunit methyltransferase G ALE3EI_RS01565 PF00487 Fatty acid desaturase ALE3EI_RS01580 PF00155 Aminotransferase class I and II ALE3EI_RS01590 PF02222 ATP-grasp domain ALE3EI_RS01595 PF02386 Cation transport protein ALE3EI_RS01600 PF02254 TrkA-N domain ALE3EI_RS01600 PF02080 TrkA-C domain ALE3EI_RS01605 PF01209 ubiE/COQ5 methyltransferase family ALE3EI_RS01625 PF01116 Fructose-bisphosphate aldolase class-II ALE3EI_RS01630 PF01039 Carboxyl transferase domain ALE3EI_RS01640 PF00312 Ribosomal protein S15 ALE3EI_RS01645 PF00013 KH domain ALE3EI_RS01645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ALE3EI_RS01645 PF01138 3' exoribonuclease family, domain 1 ALE3EI_RS01645 PF03725 3' exoribonuclease family, domain 2 ALE3EI_RS01645 PF00575 S1 RNA binding domain ALE3EI_RS01670 PF03979 Sigma-70 factor, region 1.1 ALE3EI_RS01670 PF00140 Sigma-70 factor, region 1.2 ALE3EI_RS01670 PF04542 Sigma-70 region 2 ALE3EI_RS01670 PF04539 Sigma-70 region 3 ALE3EI_RS01670 PF04545 Sigma-70, region 4 ALE3EI_RS01680 PF00834 Ribulose-phosphate 3 epimerase family ALE3EI_RS01730 PF09424 Yqey-like protein ALE3EI_RS01735 PF00091 Tubulin/FtsZ family, GTPase domain ALE3EI_RS01735 PF12327 FtsZ family, C-terminal domain ALE3EI_RS01740 PF02491 SHS2 domain inserted in FTSA ALE3EI_RS01750 PF08245 Mur ligase middle domain ALE3EI_RS01750 PF01225 Mur ligase family, catalytic domain ALE3EI_RS01750 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS01755 PF03033 Glycosyltransferase family 28 N-terminal domain ALE3EI_RS01755 PF04101 Glycosyltransferase family 28 C-terminal domain ALE3EI_RS01760 PF01098 Cell cycle protein ALE3EI_RS01765 PF08245 Mur ligase middle domain ALE3EI_RS01765 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS01770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ALE3EI_RS01770 PF00953 Glycosyl transferase family 4 ALE3EI_RS01775 PF08245 Mur ligase middle domain ALE3EI_RS01775 PF01225 Mur ligase family, catalytic domain ALE3EI_RS01775 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS01780 PF03717 Penicillin-binding Protein dimerisation domain ALE3EI_RS01780 PF00905 Penicillin binding protein transpeptidase domain ALE3EI_RS01780 PF03793 PASTA domain ALE3EI_RS01790 PF01795 MraW methylase family ALE3EI_RS01795 PF02381 MraZ protein, putative antitoxin-like ALE3EI_RS01805 PF01926 50S ribosome-binding GTPase ALE3EI_RS01820 PF02540 NAD synthase ALE3EI_RS01825 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS01825 PF00072 Response regulator receiver domain ALE3EI_RS01830 PF01807 CHC2 zinc finger ALE3EI_RS01830 PF10410 DnaB-helicase binding domain of primase ALE3EI_RS01830 PF08275 DNA primase catalytic core, N-terminal domain ALE3EI_RS01855 PF00348 Polyprenyl synthetase ALE3EI_RS01880 PF04055 Radical SAM superfamily ALE3EI_RS01885 PF01483 Proprotein convertase P-domain ALE3EI_RS01890 PF02547 Queuosine biosynthesis protein ALE3EI_RS01895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALE3EI_RS01920 PF02580 D-Tyr-tRNA(Tyr) deacylase ALE3EI_RS01925 PF16745 RsgA N-terminal domain ALE3EI_RS01925 PF03193 RsgA GTPase ALE3EI_RS01930 PF18152 DAHP synthase ferredoxin-like domain ALE3EI_RS01930 PF00793 DAHP synthetase I family ALE3EI_RS01935 PF00005 ABC transporter ALE3EI_RS01960 PF00291 Pyridoxal-phosphate dependent enzyme ALE3EI_RS01965 PF02082 Transcriptional regulator ALE3EI_RS01970 PF02219 Methylenetetrahydrofolate reductase ALE3EI_RS01975 PF02607 B12 binding domain ALE3EI_RS01975 PF02310 B12 binding domain ALE3EI_RS01975 PF02965 Vitamin B12 dependent methionine synthase, activation domain ALE3EI_RS01975 PF00809 Pterin binding enzyme ALE3EI_RS01975 PF02574 Homocysteine S-methyltransferase ALE3EI_RS01980 PF00809 Pterin binding enzyme ALE3EI_RS01980 PF02607 B12 binding domain ALE3EI_RS01980 PF02310 B12 binding domain ALE3EI_RS01980 PF02965 Vitamin B12 dependent methionine synthase, activation domain ALE3EI_RS01980 PF02574 Homocysteine S-methyltransferase ALE3EI_RS01985 PF02566 OsmC-like protein ALE3EI_RS01990 PF13840 ACT domain ALE3EI_RS01990 PF00696 Amino acid kinase family ALE3EI_RS01990 PF00742 Homoserine dehydrogenase ALE3EI_RS01990 PF01842 ACT domain ALE3EI_RS01990 PF03447 Homoserine dehydrogenase, NAD binding domain ALE3EI_RS01995 PF01053 Cys/Met metabolism PLP-dependent enzyme ALE3EI_RS02005 PF02772 S-adenosylmethionine synthetase, central domain ALE3EI_RS02005 PF02773 S-adenosylmethionine synthetase, C-terminal domain ALE3EI_RS02005 PF00438 S-adenosylmethionine synthetase, N-terminal domain ALE3EI_RS02015 PF00072 Response regulator receiver domain ALE3EI_RS02015 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS02065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALE3EI_RS02065 PF01411 tRNA synthetases class II (A) ALE3EI_RS02065 PF02272 DHHA1 domain ALE3EI_RS02070 PF01551 Peptidase family M23 ALE3EI_RS02070 PF08460 Bacterial SH3 domain ALE3EI_RS02100 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ALE3EI_RS02100 PF01926 50S ribosome-binding GTPase ALE3EI_RS02105 PF07650 KH domain ALE3EI_RS02105 PF01926 50S ribosome-binding GTPase ALE3EI_RS02120 PF00999 Sodium/hydrogen exchanger family ALE3EI_RS02140 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS02145 PF01925 Sulfite exporter TauE/SafE ALE3EI_RS02160 PF01738 Dienelactone hydrolase family ALE3EI_RS02165 PF00072 Response regulator receiver domain ALE3EI_RS02165 PF00486 Transcriptional regulatory protein, C terminal ALE3EI_RS02170 PF00989 PAS fold ALE3EI_RS02170 PF16736 Single Cache-like ALE3EI_RS02170 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS02195 PF00672 HAMP domain ALE3EI_RS02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS02195 PF07730 Histidine kinase ALE3EI_RS02245 PF12161 HsdM N-terminal domain ALE3EI_RS02245 PF02384 N-6 DNA Methylase ALE3EI_RS02265 PF12008 Type I restriction and modification enzyme - subunit R C terminal ALE3EI_RS02265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALE3EI_RS02265 PF18766 SWI2/SNF2 ATPase ALE3EI_RS02270 PF12102 Domain of unknown function (DUF3578) ALE3EI_RS02270 PF07728 AAA domain (dynein-related subfamily) ALE3EI_RS02295 PF02796 Helix-turn-helix domain of resolvase ALE3EI_RS02295 PF00239 Resolvase, N terminal domain ALE3EI_RS02315 PF11867 Domain of unknown function (DUF3387) ALE3EI_RS02315 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALE3EI_RS02315 PF18766 SWI2/SNF2 ATPase ALE3EI_RS02335 PF12161 HsdM N-terminal domain ALE3EI_RS02335 PF02384 N-6 DNA Methylase ALE3EI_RS02385 PF00873 AcrB/AcrD/AcrF family ALE3EI_RS02395 PF16326 ABC transporter C-terminal domain ALE3EI_RS02395 PF12848 ABC transporter ALE3EI_RS02395 PF00005 ABC transporter ALE3EI_RS02405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_RS02405 PF01266 FAD dependent oxidoreductase ALE3EI_RS02425 PF03781 Sulfatase-modifying factor enzyme 1 ALE3EI_RS02435 PF01751 Toprim domain ALE3EI_RS02435 PF13368 Topoisomerase C-terminal repeat ALE3EI_RS02435 PF01131 DNA topoisomerase ALE3EI_RS02440 PF00719 Inorganic pyrophosphatase ALE3EI_RS02450 PF04055 Radical SAM superfamily ALE3EI_RS02450 PF01938 TRAM domain ALE3EI_RS02450 PF00919 Uncharacterized protein family UPF0004 ALE3EI_RS02455 PF00158 Sigma-54 interaction domain ALE3EI_RS02475 PF00166 Chaperonin 10 Kd subunit ALE3EI_RS02480 PF00118 TCP-1/cpn60 chaperonin family ALE3EI_RS02500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALE3EI_RS02500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALE3EI_RS02500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALE3EI_RS02500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALE3EI_RS02540 PF00005 ABC transporter ALE3EI_RS02540 PF12704 MacB-like periplasmic core domain ALE3EI_RS02540 PF02687 FtsX-like permease family ALE3EI_RS02545 PF01808 AICARFT/IMPCHase bienzyme ALE3EI_RS02545 PF02142 MGS-like domain ALE3EI_RS02565 PF03717 Penicillin-binding Protein dimerisation domain ALE3EI_RS02565 PF00905 Penicillin binding protein transpeptidase domain ALE3EI_RS02570 PF01098 Cell cycle protein ALE3EI_RS02580 PF12911 N-terminal TM domain of oligopeptide transport permease C ALE3EI_RS02580 PF00528 Binding-protein-dependent transport system inner membrane component ALE3EI_RS02585 PF00595 PDZ domain ALE3EI_RS02585 PF11818 C-terminal domain of tail specific protease (DUF3340) ALE3EI_RS02585 PF03572 Peptidase family S41 ALE3EI_RS02585 PF17804 Tail specific protease N-terminal domain ALE3EI_RS02590 PF01975 Survival protein SurE ALE3EI_RS02600 PF02684 Lipid-A-disaccharide synthetase ALE3EI_RS02605 PF00877 NlpC/P60 family ALE3EI_RS02610 PF03772 Competence protein ALE3EI_RS02610 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS02610 PF13567 Domain of unknown function (DUF4131) ALE3EI_RS02615 PF00085 Thioredoxin ALE3EI_RS02620 PF00854 POT family ALE3EI_RS02625 PF00854 POT family ALE3EI_RS02630 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ALE3EI_RS02630 PF00326 Prolyl oligopeptidase family ALE3EI_RS02635 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ALE3EI_RS02650 PF03471 Transporter associated domain ALE3EI_RS02650 PF00571 CBS domain ALE3EI_RS02675 PF03309 Type III pantothenate kinase ALE3EI_RS02700 PF03301 Tryptophan 2,3-dioxygenase ALE3EI_RS02710 PF02627 Carboxymuconolactone decarboxylase family ALE3EI_RS02720 PF17773 UPF0176 acylphosphatase like domain ALE3EI_RS02720 PF00581 Rhodanese-like domain ALE3EI_RS02720 PF12368 Rhodanase C-terminal ALE3EI_RS02730 PF01048 Phosphorylase superfamily ALE3EI_RS02735 PF01209 ubiE/COQ5 methyltransferase family ALE3EI_RS02740 PF01384 Phosphate transporter family ALE3EI_RS02775 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALE3EI_RS02775 PF18113 Rubredoxin binding C-terminal domain ALE3EI_RS02790 PF07238 PilZ domain ALE3EI_RS02790 PF00535 Glycosyl transferase family 2 ALE3EI_RS02800 PF04389 Peptidase family M28 ALE3EI_RS02820 PF00795 Carbon-nitrogen hydrolase ALE3EI_RS02820 PF00583 Acetyltransferase (GNAT) family ALE3EI_RS02825 PF01916 Deoxyhypusine synthase ALE3EI_RS02830 PF00491 Arginase family ALE3EI_RS02835 PF17944 Arginine decarboxylase C-terminal helical extension ALE3EI_RS02835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALE3EI_RS02835 PF17810 Arginine decarboxylase helical bundle domain ALE3EI_RS02840 PF00849 RNA pseudouridylate synthase ALE3EI_RS02840 PF01479 S4 domain ALE3EI_RS02910 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ALE3EI_RS02915 PF00535 Glycosyl transferase family 2 ALE3EI_RS02935 PF03831 PhnA domain ALE3EI_RS02935 PF08274 PhnA Zinc-Ribbon ALE3EI_RS02985 PF04237 YjbR ALE3EI_RS03005 PF04055 Radical SAM superfamily ALE3EI_RS03005 PF06969 HemN C-terminal domain ALE3EI_RS03010 PF02075 Crossover junction endodeoxyribonuclease RuvC ALE3EI_RS03020 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ALE3EI_RS03020 PF00535 Glycosyl transferase family 2 ALE3EI_RS03090 PF04011 LemA family ALE3EI_RS03115 PF00574 Clp protease ALE3EI_RS03120 PF00085 Thioredoxin ALE3EI_RS03125 PF05726 Pirin C-terminal cupin domain ALE3EI_RS03125 PF02678 Pirin ALE3EI_RS03140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALE3EI_RS03140 PF14579 Helix-hairpin-helix motif ALE3EI_RS03140 PF02811 PHP domain ALE3EI_RS03140 PF01336 OB-fold nucleic acid binding domain ALE3EI_RS03140 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALE3EI_RS03155 PF00886 Ribosomal protein S16 ALE3EI_RS03160 PF01782 RimM N-terminal domain ALE3EI_RS03160 PF05239 PRC-barrel domain ALE3EI_RS03165 PF05175 Methyltransferase small domain ALE3EI_RS03170 PF13520 Amino acid permease ALE3EI_RS03180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS03180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALE3EI_RS03180 PF02770 Acyl-CoA dehydrogenase, middle domain ALE3EI_RS03190 PF00111 2Fe-2S iron-sulfur cluster binding domain ALE3EI_RS03195 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALE3EI_RS03200 PF01521 Iron-sulphur cluster biosynthesis ALE3EI_RS03200 PF01106 NifU-like domain ALE3EI_RS03205 PF10609 NUBPL iron-transfer P-loop NTPase ALE3EI_RS03205 PF01883 Iron-sulfur cluster assembly protein ALE3EI_RS03210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALE3EI_RS03220 PF02390 Putative methyltransferase ALE3EI_RS03225 PF04101 Glycosyltransferase family 28 C-terminal domain ALE3EI_RS03225 PF03033 Glycosyltransferase family 28 N-terminal domain ALE3EI_RS03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS03230 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS03230 PF16736 Single Cache-like ALE3EI_RS03230 PF00989 PAS fold ALE3EI_RS03235 PF00072 Response regulator receiver domain ALE3EI_RS03235 PF00486 Transcriptional regulatory protein, C terminal ALE3EI_RS03255 PF00579 tRNA synthetases class I (W and Y) ALE3EI_RS03260 PF16363 GDP-mannose 4,6 dehydratase ALE3EI_RS03270 PF01979 Amidohydrolase family ALE3EI_RS03275 PF00535 Glycosyl transferase family 2 ALE3EI_RS03290 PF01293 Phosphoenolpyruvate carboxykinase ALE3EI_RS03295 PF04241 Protein of unknown function (DUF423) ALE3EI_RS03305 PF04298 Putative neutral zinc metallopeptidase ALE3EI_RS03310 PF09334 tRNA synthetases class I (M) ALE3EI_RS03310 PF13603 Leucyl-tRNA synthetase, Domain 2 ALE3EI_RS03310 PF08264 Anticodon-binding domain of tRNA ALE3EI_RS03315 PF18075 FtsX extracellular domain ALE3EI_RS03330 PF02673 Bacitracin resistance protein BacA ALE3EI_RS03335 PF01509 TruB family pseudouridylate synthase (N terminal domain) ALE3EI_RS03345 PF13673 Acetyltransferase (GNAT) domain ALE3EI_RS03345 PF03352 Methyladenine glycosylase ALE3EI_RS03345 PF00117 Glutamine amidotransferase class-I ALE3EI_RS03345 PF00958 GMP synthase C terminal domain ALE3EI_RS03345 PF13302 Acetyltransferase (GNAT) domain ALE3EI_RS03355 PF04371 Porphyromonas-type peptidyl-arginine deiminase ALE3EI_RS03360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ALE3EI_RS03370 PF01613 Flavin reductase like domain ALE3EI_RS03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS03375 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS03375 PF00989 PAS fold ALE3EI_RS03385 PF01230 HIT domain ALE3EI_RS03390 PF03449 Transcription elongation factor, N-terminal ALE3EI_RS03390 PF01272 Transcription elongation factor, GreA/GreB, C-term ALE3EI_RS03405 PF00472 RF-1 domain ALE3EI_RS03405 PF03462 PCRF domain ALE3EI_RS03420 PF04973 Nicotinamide mononucleotide transporter ALE3EI_RS03430 PF01884 PcrB family ALE3EI_RS03440 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ALE3EI_RS03440 PF05221 S-adenosyl-L-homocysteine hydrolase ALE3EI_RS03450 PF01016 Ribosomal L27 protein ALE3EI_RS03455 PF00829 Ribosomal prokaryotic L21 protein ALE3EI_RS03475 PF03471 Transporter associated domain ALE3EI_RS03475 PF00571 CBS domain ALE3EI_RS03480 PF00436 Single-strand binding protein family ALE3EI_RS03485 PF14815 NUDIX domain ALE3EI_RS03485 PF00730 HhH-GPD superfamily base excision DNA repair protein ALE3EI_RS03490 PF00216 Bacterial DNA-binding protein ALE3EI_RS03495 PF00575 S1 RNA binding domain ALE3EI_RS03495 PF10150 Ribonuclease E/G family ALE3EI_RS03515 PF04055 Radical SAM superfamily ALE3EI_RS03515 PF06968 Biotin and Thiamin Synthesis associated domain ALE3EI_RS03520 PF00109 Beta-ketoacyl synthase, N-terminal domain ALE3EI_RS03520 PF02801 Beta-ketoacyl synthase, C-terminal domain ALE3EI_RS03530 PF00202 Aminotransferase class-III ALE3EI_RS03540 PF00155 Aminotransferase class I and II ALE3EI_RS03545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ALE3EI_RS03550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALE3EI_RS03550 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALE3EI_RS03555 PF01063 Amino-transferase class IV ALE3EI_RS03565 PF01380 SIS domain ALE3EI_RS03575 PF08323 Starch synthase catalytic domain ALE3EI_RS03575 PF00534 Glycosyl transferases group 1 ALE3EI_RS03580 PF02569 Pantoate-beta-alanine ligase ALE3EI_RS03585 PF02261 Aspartate decarboxylase ALE3EI_RS03630 PF00072 Response regulator receiver domain ALE3EI_RS03630 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS03635 PF07730 Histidine kinase ALE3EI_RS03645 PF00072 Response regulator receiver domain ALE3EI_RS03645 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS03650 PF00072 Response regulator receiver domain ALE3EI_RS03650 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS03655 PF07730 Histidine kinase ALE3EI_RS03655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS03655 PF05384 Sensor protein DegS ALE3EI_RS03660 PF18073 Rubredoxin metal binding domain ALE3EI_RS03670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS03670 PF02770 Acyl-CoA dehydrogenase, middle domain ALE3EI_RS03670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALE3EI_RS03675 PF00248 Aldo/keto reductase family ALE3EI_RS03680 PF13488 Glycine zipper ALE3EI_RS03680 PF00691 OmpA family ALE3EI_RS03685 PF03372 Endonuclease/Exonuclease/phosphatase family ALE3EI_RS03715 PF03129 Anticodon binding domain ALE3EI_RS03725 PF00156 Phosphoribosyl transferase domain ALE3EI_RS03735 PF00795 Carbon-nitrogen hydrolase ALE3EI_RS03745 PF00141 Peroxidase ALE3EI_RS03750 PF00155 Aminotransferase class I and II ALE3EI_RS03755 PF01627 Hpt domain ALE3EI_RS03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS03755 PF18415 Histidine kinase receptor ArcB trans-membrane domain ALE3EI_RS03755 PF00989 PAS fold ALE3EI_RS03755 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS03755 PF00072 Response regulator receiver domain ALE3EI_RS03760 PF13085 2Fe-2S iron-sulfur cluster binding domain ALE3EI_RS03765 PF02910 Fumarate reductase flavoprotein C-term ALE3EI_RS03765 PF00890 FAD binding domain ALE3EI_RS03780 PF00557 Metallopeptidase family M24 ALE3EI_RS03780 PF05195 Aminopeptidase P, N-terminal domain ALE3EI_RS03785 PF05525 Branched-chain amino acid transport protein ALE3EI_RS03790 PF00561 alpha/beta hydrolase fold ALE3EI_RS03805 PF02769 AIR synthase related protein, C-terminal domain ALE3EI_RS03805 PF00586 AIR synthase related protein, N-terminal domain ALE3EI_RS03835 PF03150 Di-haem cytochrome c peroxidase ALE3EI_RS03840 PF01521 Iron-sulphur cluster biosynthesis ALE3EI_RS03845 PF01458 Uncharacterized protein family (UPF0051) ALE3EI_RS03855 PF00005 ABC transporter ALE3EI_RS03860 PF01458 Uncharacterized protein family (UPF0051) ALE3EI_RS03865 PF00266 Aminotransferase class-V ALE3EI_RS03875 PF02657 Fe-S metabolism associated domain ALE3EI_RS03880 PF01883 Iron-sulfur cluster assembly protein ALE3EI_RS03900 PF01926 50S ribosome-binding GTPase ALE3EI_RS03900 PF13167 GTP-binding GTPase N-terminal ALE3EI_RS03900 PF16360 GTP-binding GTPase Middle Region ALE3EI_RS03920 PF00691 OmpA family ALE3EI_RS03920 PF01389 OmpA-like transmembrane domain ALE3EI_RS03940 PF01339 CheB methylesterase ALE3EI_RS03940 PF00072 Response regulator receiver domain ALE3EI_RS03945 PF01590 GAF domain ALE3EI_RS03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS03945 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS03945 PF08446 PAS fold ALE3EI_RS03945 PF00360 Phytochrome region ALE3EI_RS03960 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS03960 PF00593 TonB dependent receptor ALE3EI_RS03970 PF03301 Tryptophan 2,3-dioxygenase ALE3EI_RS03980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALE3EI_RS03985 PF04209 homogentisate 1,2-dioxygenase ALE3EI_RS03990 PF01734 Patatin-like phospholipase ALE3EI_RS03995 PF08459 UvrC Helix-hairpin-helix N-terminal ALE3EI_RS03995 PF02151 UvrB/uvrC motif ALE3EI_RS03995 PF01541 GIY-YIG catalytic domain ALE3EI_RS04000 PF18030 RimK PreATP-grasp domain ALE3EI_RS04000 PF08443 RimK-like ATP-grasp domain ALE3EI_RS04010 PF08443 RimK-like ATP-grasp domain ALE3EI_RS04010 PF18030 RimK PreATP-grasp domain ALE3EI_RS04020 PF01812 5-formyltetrahydrofolate cyclo-ligase family ALE3EI_RS04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS04035 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS04035 PF09308 LuxQ, periplasmic ALE3EI_RS04035 PF00072 Response regulator receiver domain ALE3EI_RS04040 PF01252 Signal peptidase (SPase) II ALE3EI_RS04055 PF08264 Anticodon-binding domain of tRNA ALE3EI_RS04055 PF00133 tRNA synthetases class I (I, L, M and V) ALE3EI_RS04080 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS04085 PF01431 Peptidase family M13 ALE3EI_RS04085 PF05649 Peptidase family M13 ALE3EI_RS04095 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS04110 PF02163 Peptidase family M50 ALE3EI_RS04110 PF13180 PDZ domain ALE3EI_RS04115 PF02630 SCO1/SenC ALE3EI_RS04125 PF07670 Nucleoside recognition ALE3EI_RS04125 PF07664 Ferrous iron transport protein B C terminus ALE3EI_RS04125 PF02421 Ferrous iron transport protein B ALE3EI_RS04140 PF00950 ABC 3 transport family ALE3EI_RS04145 PF00950 ABC 3 transport family ALE3EI_RS04150 PF00005 ABC transporter ALE3EI_RS04155 PF01297 Zinc-uptake complex component A periplasmic ALE3EI_RS04165 PF00950 ABC 3 transport family ALE3EI_RS04165 PF02742 Iron dependent repressor, metal binding and dimerisation domain ALE3EI_RS04170 PF00226 DnaJ domain ALE3EI_RS04170 PF00684 DnaJ central domain ALE3EI_RS04170 PF01556 DnaJ C terminal domain ALE3EI_RS04175 PF06491 Disulphide isomerase ALE3EI_RS04190 PF04055 Radical SAM superfamily ALE3EI_RS04190 PF13186 Iron-sulfur cluster-binding domain ALE3EI_RS04190 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ALE3EI_RS04195 PF00378 Enoyl-CoA hydratase/isomerase ALE3EI_RS04200 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS04200 PF00672 HAMP domain ALE3EI_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS04205 PF03653 Uncharacterised protein family (UPF0093) ALE3EI_RS04220 PF00762 Ferrochelatase ALE3EI_RS04230 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ALE3EI_RS04230 PF01488 Shikimate / quinate 5-dehydrogenase ALE3EI_RS04230 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ALE3EI_RS04235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ALE3EI_RS04235 PF03900 Porphobilinogen deaminase, C-terminal domain ALE3EI_RS04245 PF01208 Uroporphyrinogen decarboxylase (URO-D) ALE3EI_RS04260 PF01218 Coproporphyrinogen III oxidase ALE3EI_RS04265 PF00490 Delta-aminolevulinic acid dehydratase ALE3EI_RS04275 PF01595 Cyclin M transmembrane N-terminal domain ALE3EI_RS04275 PF00571 CBS domain ALE3EI_RS04290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALE3EI_RS04290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALE3EI_RS04310 PF00041 Fibronectin type III domain ALE3EI_RS04310 PF00704 Glycosyl hydrolases family 18 ALE3EI_RS04315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALE3EI_RS04315 PF00005 ABC transporter ALE3EI_RS04320 PF01144 Coenzyme A transferase ALE3EI_RS04325 PF01144 Coenzyme A transferase ALE3EI_RS04330 PF00905 Penicillin binding protein transpeptidase domain ALE3EI_RS04330 PF00912 Transglycosylase ALE3EI_RS04335 PF14109 GldH lipoprotein ALE3EI_RS04340 PF04468 PSP1 C-terminal conserved region ALE3EI_RS04345 PF00581 Rhodanese-like domain ALE3EI_RS04345 PF17773 UPF0176 acylphosphatase like domain ALE3EI_RS04345 PF12368 Rhodanase C-terminal ALE3EI_RS04350 PF00154 recA bacterial DNA recombination protein ALE3EI_RS04370 PF00579 tRNA synthetases class I (W and Y) ALE3EI_RS04375 PF02481 DNA recombination-mediator protein A ALE3EI_RS04375 PF17782 DprA winged helix domain ALE3EI_RS04410 PF00483 Nucleotidyl transferase ALE3EI_RS04420 PF00692 dUTPase ALE3EI_RS04435 PF00231 ATP synthase ALE3EI_RS04440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALE3EI_RS04440 PF00306 ATP synthase alpha/beta chain, C terminal domain ALE3EI_RS04440 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALE3EI_RS04445 PF00213 ATP synthase delta (OSCP) subunit ALE3EI_RS04450 PF00430 ATP synthase B/B' CF(0) ALE3EI_RS04455 PF00137 ATP synthase subunit C ALE3EI_RS04460 PF00119 ATP synthase A chain ALE3EI_RS04485 PF00042 Globin ALE3EI_RS04485 PF00175 Oxidoreductase NAD-binding domain ALE3EI_RS04485 PF00970 Oxidoreductase FAD-binding domain ALE3EI_RS04510 PF02843 Phosphoribosylglycinamide synthetase, C domain ALE3EI_RS04510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ALE3EI_RS04510 PF02844 Phosphoribosylglycinamide synthetase, N domain ALE3EI_RS04515 PF00501 AMP-binding enzyme ALE3EI_RS04515 PF14535 AMP-binding enzyme C-terminal domain ALE3EI_RS04520 PF00535 Glycosyl transferase family 2 ALE3EI_RS04525 PF02397 Bacterial sugar transferase ALE3EI_RS04530 PF16363 GDP-mannose 4,6 dehydratase ALE3EI_RS04535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALE3EI_RS04535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALE3EI_RS04535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALE3EI_RS04540 PF00534 Glycosyl transferases group 1 ALE3EI_RS04540 PF13439 Glycosyltransferase Family 4 ALE3EI_RS04575 PF04321 RmlD substrate binding domain ALE3EI_RS04580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ALE3EI_RS04585 PF00483 Nucleotidyl transferase ALE3EI_RS04590 PF16363 GDP-mannose 4,6 dehydratase ALE3EI_RS04605 PF01551 Peptidase family M23 ALE3EI_RS04610 PF02416 mttA/Hcf106 family ALE3EI_RS04620 PF01476 LysM domain ALE3EI_RS04620 PF06725 3D domain ALE3EI_RS04625 PF00162 Phosphoglycerate kinase ALE3EI_RS04640 PF01134 Glucose inhibited division protein A ALE3EI_RS04640 PF13932 GidA associated domain ALE3EI_RS04645 PF02130 Uncharacterized protein family UPF0054 ALE3EI_RS04655 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALE3EI_RS04665 PF01145 SPFH domain / Band 7 family ALE3EI_RS04685 PF00884 Sulfatase ALE3EI_RS04685 PF08019 Phosphoethanolamine transferase EptA/EptB ALE3EI_RS04695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ALE3EI_RS04695 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALE3EI_RS04700 PF02152 Dihydroneopterin aldolase ALE3EI_RS04715 PF00773 RNB domain ALE3EI_RS04715 PF08206 Ribonuclease B OB domain ALE3EI_RS04715 PF17876 Cold shock domain ALE3EI_RS04715 PF00575 S1 RNA binding domain ALE3EI_RS04725 PF02502 Ribose/Galactose Isomerase ALE3EI_RS04730 PF01545 Cation efflux family ALE3EI_RS04735 PF13673 Acetyltransferase (GNAT) domain ALE3EI_RS04745 PF04116 Fatty acid hydroxylase superfamily ALE3EI_RS04750 PF03572 Peptidase family S41 ALE3EI_RS04750 PF13180 PDZ domain ALE3EI_RS04755 PF00825 Ribonuclease P ALE3EI_RS04765 PF00082 Subtilase family ALE3EI_RS04770 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS04775 PF00999 Sodium/hydrogen exchanger family ALE3EI_RS04775 PF03471 Transporter associated domain ALE3EI_RS04785 PF06421 GTP-binding protein LepA C-terminus ALE3EI_RS04785 PF00679 Elongation factor G C-terminus ALE3EI_RS04785 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS04785 PF03144 Elongation factor Tu domain 2 ALE3EI_RS04795 PF01207 Dihydrouridine synthase (Dus) ALE3EI_RS04800 PF02687 FtsX-like permease family ALE3EI_RS04800 PF12704 MacB-like periplasmic core domain ALE3EI_RS04805 PF02033 Ribosome-binding factor A ALE3EI_RS04820 PF00677 Lumazine binding domain ALE3EI_RS04825 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ALE3EI_RS04835 PF01783 Ribosomal L32p protein family ALE3EI_RS04840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALE3EI_RS04840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALE3EI_RS04845 PF00364 Biotin-requiring enzyme ALE3EI_RS04850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALE3EI_RS04850 PF00289 Biotin carboxylase, N-terminal domain ALE3EI_RS04850 PF02785 Biotin carboxylase C-terminal domain ALE3EI_RS04860 PF00912 Transglycosylase ALE3EI_RS04875 PF00005 ABC transporter ALE3EI_RS04875 PF08402 TOBE domain ALE3EI_RS04880 PF00326 Prolyl oligopeptidase family ALE3EI_RS04880 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ALE3EI_RS04900 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALE3EI_RS04900 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALE3EI_RS04905 PF01741 Large-conductance mechanosensitive channel, MscL ALE3EI_RS04910 PF01168 Alanine racemase, N-terminal domain ALE3EI_RS04910 PF00842 Alanine racemase, C-terminal domain ALE3EI_RS04915 PF00265 Thymidine kinase ALE3EI_RS04925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALE3EI_RS04930 PF03167 Uracil DNA glycosylase superfamily ALE3EI_RS04940 PF17768 RecJ OB domain ALE3EI_RS04940 PF01368 DHH family ALE3EI_RS04940 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ALE3EI_RS04940 PF02272 DHHA1 domain ALE3EI_RS04945 PF00149 Calcineurin-like phosphoesterase ALE3EI_RS04950 PF01242 6-pyruvoyl tetrahydropterin synthase ALE3EI_RS04985 PF12705 PD-(D/E)XK nuclease superfamily ALE3EI_RS04990 PF00691 OmpA family ALE3EI_RS04990 PF00223 Photosystem I psaA/psaB protein ALE3EI_RS04995 PF00155 Aminotransferase class I and II ALE3EI_RS05000 PF00580 UvrD/REP helicase N-terminal domain ALE3EI_RS05000 PF13361 UvrD-like helicase C-terminal domain ALE3EI_RS05000 PF12705 PD-(D/E)XK nuclease superfamily ALE3EI_RS05005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ALE3EI_RS05005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ALE3EI_RS05035 PF00156 Phosphoribosyl transferase domain ALE3EI_RS05045 PF01693 Caulimovirus viroplasmin ALE3EI_RS05050 PF00551 Formyl transferase ALE3EI_RS05055 PF00550 Phosphopantetheine attachment site ALE3EI_RS05060 PF00109 Beta-ketoacyl synthase, N-terminal domain ALE3EI_RS05060 PF02801 Beta-ketoacyl synthase, C-terminal domain ALE3EI_RS05065 PF00035 Double-stranded RNA binding motif ALE3EI_RS05065 PF14622 Ribonuclease-III-like ALE3EI_RS05075 PF02887 Pyruvate kinase, alpha/beta domain ALE3EI_RS05075 PF00391 PEP-utilising enzyme, mobile domain ALE3EI_RS05075 PF00224 Pyruvate kinase, barrel domain ALE3EI_RS05085 PF11799 impB/mucB/samB family C-terminal domain ALE3EI_RS05085 PF00817 impB/mucB/samB family ALE3EI_RS05090 PF01928 CYTH domain ALE3EI_RS05100 PF03932 CutC family ALE3EI_RS05105 PF00728 Glycosyl hydrolase family 20, catalytic domain ALE3EI_RS05105 PF07691 PA14 domain ALE3EI_RS05105 PF02838 Glycosyl hydrolase family 20, domain 2 ALE3EI_RS05110 PF16355 Domain of unknown function (DUF4982) ALE3EI_RS05110 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ALE3EI_RS05110 PF00703 Glycosyl hydrolases family 2 ALE3EI_RS05110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ALE3EI_RS05110 PF02837 Glycosyl hydrolases family 2, sugar binding domain ALE3EI_RS05115 PF06832 Penicillin-Binding Protein C-terminus Family ALE3EI_RS05115 PF00912 Transglycosylase ALE3EI_RS05115 PF00905 Penicillin binding protein transpeptidase domain ALE3EI_RS05120 PF01835 MG2 domain ALE3EI_RS05120 PF17962 Bacterial macroglobulin domain 6 ALE3EI_RS05120 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ALE3EI_RS05120 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ALE3EI_RS05120 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ALE3EI_RS05120 PF00207 Alpha-2-macroglobulin family ALE3EI_RS05125 PF03992 Antibiotic biosynthesis monooxygenase ALE3EI_RS05130 PF01112 Asparaginase ALE3EI_RS05140 PF06052 3-hydroxyanthranilic acid dioxygenase ALE3EI_RS05145 PF00171 Aldehyde dehydrogenase family ALE3EI_RS05155 PF00149 Calcineurin-like phosphoesterase ALE3EI_RS05165 PF13421 SPFH domain-Band 7 family ALE3EI_RS05180 PF00106 short chain dehydrogenase ALE3EI_RS05195 PF17863 AAA lid domain ALE3EI_RS05195 PF07726 ATPase family associated with various cellular activities (AAA) ALE3EI_RS05200 PF01882 Protein of unknown function DUF58 ALE3EI_RS05210 PF13519 von Willebrand factor type A domain ALE3EI_RS05215 PF07584 Aerotolerance regulator N-terminal ALE3EI_RS05215 PF13519 von Willebrand factor type A domain ALE3EI_RS05245 PF01409 tRNA synthetases class II core domain (F) ALE3EI_RS05245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ALE3EI_RS05255 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ALE3EI_RS05255 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALE3EI_RS05265 PF01467 Cytidylyltransferase-like ALE3EI_RS05270 PF00625 Guanylate kinase ALE3EI_RS05275 PF08340 Domain of unknown function (DUF1732) ALE3EI_RS05275 PF03755 YicC-like family, N-terminal region ALE3EI_RS05310 PF01053 Cys/Met metabolism PLP-dependent enzyme ALE3EI_RS05315 PF06580 Histidine kinase ALE3EI_RS05315 PF07694 5TMR of 5TMR-LYT ALE3EI_RS05320 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS05320 PF00072 Response regulator receiver domain ALE3EI_RS05335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALE3EI_RS05335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALE3EI_RS05345 PF11967 Recombination protein O N terminal ALE3EI_RS05345 PF02565 Recombination protein O C terminal ALE3EI_RS05350 PF00593 TonB dependent receptor ALE3EI_RS05350 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS05355 PF13193 AMP-binding enzyme C-terminal domain ALE3EI_RS05355 PF16177 Acetyl-coenzyme A synthetase N-terminus ALE3EI_RS05355 PF00501 AMP-binding enzyme ALE3EI_RS05385 PF07237 Protein of unknown function (DUF1428) ALE3EI_RS05395 PF01381 Helix-turn-helix ALE3EI_RS05405 PF00436 Single-strand binding protein family ALE3EI_RS05410 PF01588 Putative tRNA binding domain ALE3EI_RS05410 PF08264 Anticodon-binding domain of tRNA ALE3EI_RS05410 PF09334 tRNA synthetases class I (M) ALE3EI_RS05420 PF02016 LD-carboxypeptidase N-terminal domain ALE3EI_RS05420 PF17676 LD-carboxypeptidase C-terminal domain ALE3EI_RS05425 PF02021 Uncharacterised protein family UPF0102 ALE3EI_RS05430 PF03461 TRCF domain ALE3EI_RS05430 PF00270 DEAD/DEAH box helicase ALE3EI_RS05430 PF02559 CarD-like/TRCF domain ALE3EI_RS05430 PF17757 UvrB interaction domain ALE3EI_RS05430 PF00271 Helicase conserved C-terminal domain ALE3EI_RS05435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALE3EI_RS05440 PF00266 Aminotransferase class-V ALE3EI_RS05455 PF08494 DEAD/H associated ALE3EI_RS05455 PF00270 DEAD/DEAH box helicase ALE3EI_RS05455 PF00271 Helicase conserved C-terminal domain ALE3EI_RS05460 PF01068 ATP dependent DNA ligase domain ALE3EI_RS05475 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ALE3EI_RS05485 PF01842 ACT domain ALE3EI_RS05485 PF00696 Amino acid kinase family ALE3EI_RS05495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ALE3EI_RS05495 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ALE3EI_RS05505 PF14525 AraC-binding-like domain ALE3EI_RS05505 PF12833 Helix-turn-helix domain ALE3EI_RS05515 PF01566 Natural resistance-associated macrophage protein ALE3EI_RS05515 PF03358 NADPH-dependent FMN reductase ALE3EI_RS05520 PF12706 Beta-lactamase superfamily domain ALE3EI_RS05545 PF00211 Adenylate and Guanylate cyclase catalytic domain ALE3EI_RS05545 PF00672 HAMP domain ALE3EI_RS05550 PF00072 Response regulator receiver domain ALE3EI_RS05550 PF01966 HD domain ALE3EI_RS05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS05555 PF08447 PAS fold ALE3EI_RS05555 PF08448 PAS fold ALE3EI_RS05560 PF13426 PAS domain ALE3EI_RS05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS05560 PF00072 Response regulator receiver domain ALE3EI_RS05590 PF01451 Low molecular weight phosphotyrosine protein phosphatase ALE3EI_RS05605 PF01022 Bacterial regulatory protein, arsR family ALE3EI_RS05615 PF12681 Glyoxalase-like domain ALE3EI_RS05620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALE3EI_RS05620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALE3EI_RS05630 PF03448 MgtE intracellular N domain ALE3EI_RS05630 PF01769 Divalent cation transporter ALE3EI_RS05630 PF00571 CBS domain ALE3EI_RS05635 PF00398 Ribosomal RNA adenine dimethylase ALE3EI_RS05655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALE3EI_RS05655 PF02403 Seryl-tRNA synthetase N-terminal domain ALE3EI_RS05665 PF06574 FAD synthetase ALE3EI_RS05665 PF01687 Riboflavin kinase ALE3EI_RS05670 PF01195 Peptidyl-tRNA hydrolase ALE3EI_RS05675 PF01386 Ribosomal L25p family ALE3EI_RS05675 PF14693 Ribosomal protein TL5, C-terminal domain ALE3EI_RS05680 PF14572 Phosphoribosyl synthetase-associated domain ALE3EI_RS05680 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALE3EI_RS05700 PF13180 PDZ domain ALE3EI_RS05700 PF03572 Peptidase family S41 ALE3EI_RS05710 PF01914 MarC family integral membrane protein ALE3EI_RS05730 PF00317 Ribonucleotide reductase, all-alpha domain ALE3EI_RS05730 PF03477 ATP cone domain ALE3EI_RS05730 PF02867 Ribonucleotide reductase, barrel domain ALE3EI_RS05770 PF00916 Sulfate permease family ALE3EI_RS05770 PF01740 STAS domain ALE3EI_RS05775 PF00484 Carbonic anhydrase ALE3EI_RS05785 PF00593 TonB dependent receptor ALE3EI_RS05785 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS05795 PF13286 Phosphohydrolase-associated domain ALE3EI_RS05795 PF01966 HD domain ALE3EI_RS05800 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS05800 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ALE3EI_RS05800 PF02780 Transketolase, C-terminal domain ALE3EI_RS05805 PF14437 MafB19-like deaminase ALE3EI_RS05810 PF00313 'Cold-shock' DNA-binding domain ALE3EI_RS05820 PF00654 Voltage gated chloride channel ALE3EI_RS05825 PF01336 OB-fold nucleic acid binding domain ALE3EI_RS05825 PF02938 GAD domain ALE3EI_RS05825 PF00152 tRNA synthetases class II (D, K and N) ALE3EI_RS05830 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS05830 PF00593 TonB dependent receptor ALE3EI_RS05840 PF00873 AcrB/AcrD/AcrF family ALE3EI_RS05845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALE3EI_RS05845 PF00529 HlyD membrane-fusion protein of T1SS ALE3EI_RS05855 PF00440 Bacterial regulatory proteins, tetR family ALE3EI_RS05855 PF08361 MAATS-type transcriptional repressor, C-terminal region ALE3EI_RS05860 PF00348 Polyprenyl synthetase ALE3EI_RS05870 PF00676 Dehydrogenase E1 component ALE3EI_RS05870 PF16078 2-oxoglutarate dehydrogenase N-terminus ALE3EI_RS05870 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS05870 PF16870 2-oxoglutarate dehydrogenase C-terminal ALE3EI_RS05875 PF00364 Biotin-requiring enzyme ALE3EI_RS05875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALE3EI_RS05875 PF02817 e3 binding domain ALE3EI_RS05880 PF00072 Response regulator receiver domain ALE3EI_RS05880 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS05885 PF07730 Histidine kinase ALE3EI_RS05885 PF05384 Sensor protein DegS ALE3EI_RS05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS05895 PF01026 TatD related DNase ALE3EI_RS05900 PF00710 Asparaginase, N-terminal ALE3EI_RS05900 PF17763 Glutaminase/Asparaginase C-terminal domain ALE3EI_RS05910 PF01618 MotA/TolQ/ExbB proton channel family ALE3EI_RS05940 PF00309 Sigma-54 factor, Activator interacting domain (AID) ALE3EI_RS05940 PF04963 Sigma-54 factor, core binding domain ALE3EI_RS05940 PF04552 Sigma-54, DNA binding domain ALE3EI_RS05945 PF01336 OB-fold nucleic acid binding domain ALE3EI_RS05945 PF00152 tRNA synthetases class II (D, K and N) ALE3EI_RS05960 PF01765 Ribosome recycling factor ALE3EI_RS05965 PF00696 Amino acid kinase family ALE3EI_RS05970 PF00889 Elongation factor TS ALE3EI_RS05975 PF00318 Ribosomal protein S2 ALE3EI_RS05980 PF00380 Ribosomal protein S9/S16 ALE3EI_RS05985 PF00572 Ribosomal protein L13 ALE3EI_RS06000 PF01612 3'-5' exonuclease ALE3EI_RS06000 PF00476 DNA polymerase family A ALE3EI_RS06000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ALE3EI_RS06000 PF01367 5'-3' exonuclease, C-terminal SAM fold ALE3EI_RS06010 PF00072 Response regulator receiver domain ALE3EI_RS06010 PF03861 ANTAR domain ALE3EI_RS06015 PF07568 Histidine kinase ALE3EI_RS06015 PF13581 Histidine kinase-like ATPase domain ALE3EI_RS06015 PF13426 PAS domain ALE3EI_RS06020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALE3EI_RS06020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALE3EI_RS06020 PF00034 Cytochrome c ALE3EI_RS06030 PF01112 Asparaginase ALE3EI_RS06035 PF03575 Peptidase family S51 ALE3EI_RS06040 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS06040 PF08245 Mur ligase middle domain ALE3EI_RS06040 PF08443 RimK-like ATP-grasp domain ALE3EI_RS06050 PF04397 LytTr DNA-binding domain ALE3EI_RS06050 PF00072 Response regulator receiver domain ALE3EI_RS06055 PF13426 PAS domain ALE3EI_RS06055 PF13581 Histidine kinase-like ATPase domain ALE3EI_RS06055 PF07568 Histidine kinase ALE3EI_RS06060 PF07690 Major Facilitator Superfamily ALE3EI_RS06065 PF01112 Asparaginase ALE3EI_RS06070 PF07971 Glycosyl hydrolase family 92 ALE3EI_RS06070 PF17678 Glycosyl hydrolase family 92 N-terminal domain ALE3EI_RS06075 PF00149 Calcineurin-like phosphoesterase ALE3EI_RS06075 PF10518 TAT (twin-arginine translocation) pathway signal sequence ALE3EI_RS06080 PF00085 Thioredoxin ALE3EI_RS06095 PF01522 Polysaccharide deacetylase ALE3EI_RS06115 PF04820 Tryptophan halogenase ALE3EI_RS06120 PF00221 Aromatic amino acid lyase ALE3EI_RS06135 PF07977 FabA-like domain ALE3EI_RS06160 PF00550 Phosphopantetheine attachment site ALE3EI_RS06165 PF02801 Beta-ketoacyl synthase, C-terminal domain ALE3EI_RS06165 PF00109 Beta-ketoacyl synthase, N-terminal domain ALE3EI_RS06175 PF01522 Polysaccharide deacetylase ALE3EI_RS06175 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain ALE3EI_RS06185 PF07977 FabA-like domain ALE3EI_RS06190 PF00535 Glycosyl transferase family 2 ALE3EI_RS06210 PF14535 AMP-binding enzyme C-terminal domain ALE3EI_RS06210 PF00501 AMP-binding enzyme ALE3EI_RS06220 PF00582 Universal stress protein family ALE3EI_RS06225 PF02576 RimP N-terminal domain ALE3EI_RS06230 PF13184 NusA-like KH domain ALE3EI_RS06230 PF08529 NusA N-terminal domain ALE3EI_RS06230 PF00575 S1 RNA binding domain ALE3EI_RS06235 PF11987 Translation-initiation factor 2 ALE3EI_RS06235 PF04760 Translation initiation factor IF-2, N-terminal region ALE3EI_RS06235 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS06250 PF13247 4Fe-4S dicluster domain ALE3EI_RS06250 PF00037 4Fe-4S binding domain ALE3EI_RS06255 PF00318 Ribosomal protein S2 ALE3EI_RS06275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALE3EI_RS06275 PF06481 COX Aromatic Rich Motif ALE3EI_RS06280 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALE3EI_RS06285 PF01554 MatE ALE3EI_RS06295 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALE3EI_RS06295 PF17864 RuvB AAA lid domain ALE3EI_RS06295 PF05491 RuvB C-terminal winged helix domain ALE3EI_RS06300 PF00067 Cytochrome P450 ALE3EI_RS06305 PF08331 Domain of unknown function (DUF1730) ALE3EI_RS06310 PF03949 Malic enzyme, NAD binding domain ALE3EI_RS06310 PF00390 Malic enzyme, N-terminal domain ALE3EI_RS06310 PF01515 Phosphate acetyl/butaryl transferase ALE3EI_RS06315 PF07499 RuvA, C-terminal domain ALE3EI_RS06315 PF01330 RuvA N terminal domain ALE3EI_RS06325 PF01597 Glycine cleavage H-protein ALE3EI_RS06350 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS06350 PF16123 Hydroxyacylglutathione hydrolase C-terminus ALE3EI_RS06355 PF01040 UbiA prenyltransferase family ALE3EI_RS06360 PF00510 Cytochrome c oxidase subunit III ALE3EI_RS06365 PF00510 Cytochrome c oxidase subunit III ALE3EI_RS06380 PF02630 SCO1/SenC ALE3EI_RS06385 PF04238 Protein of unknown function (DUF420) ALE3EI_RS06395 PF00005 ABC transporter ALE3EI_RS06400 PF00005 ABC transporter ALE3EI_RS06400 PF02687 FtsX-like permease family ALE3EI_RS06400 PF12704 MacB-like periplasmic core domain ALE3EI_RS06405 PF12704 MacB-like periplasmic core domain ALE3EI_RS06405 PF02687 FtsX-like permease family ALE3EI_RS06405 PF00005 ABC transporter ALE3EI_RS06420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALE3EI_RS06425 PF00814 Glycoprotease family ALE3EI_RS06450 PF00924 Mechanosensitive ion channel ALE3EI_RS06450 PF05552 Conserved TM helix ALE3EI_RS06455 PF03190 Protein of unknown function, DUF255 ALE3EI_RS06465 PF01106 NifU-like domain ALE3EI_RS06485 PF06580 Histidine kinase ALE3EI_RS06485 PF07694 5TMR of 5TMR-LYT ALE3EI_RS06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS06490 PF00072 Response regulator receiver domain ALE3EI_RS06490 PF04397 LytTr DNA-binding domain ALE3EI_RS06495 PF01177 Asp/Glu/Hydantoin racemase ALE3EI_RS06515 PF01255 Putative undecaprenyl diphosphate synthase ALE3EI_RS06525 PF01513 ATP-NAD kinase ALE3EI_RS06535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ALE3EI_RS06540 PF00561 alpha/beta hydrolase fold ALE3EI_RS06560 PF05698 Bacterial trigger factor protein (TF) C-terminus ALE3EI_RS06560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALE3EI_RS06560 PF05697 Bacterial trigger factor protein (TF) ALE3EI_RS06565 PF00574 Clp protease ALE3EI_RS06570 PF10431 C-terminal, D2-small domain, of ClpB protein ALE3EI_RS06570 PF06689 ClpX C4-type zinc finger ALE3EI_RS06570 PF07724 AAA domain (Cdc48 subfamily) ALE3EI_RS06600 PF01712 Deoxynucleoside kinase ALE3EI_RS06605 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALE3EI_RS06605 PF00588 SpoU rRNA Methylase family ALE3EI_RS06610 PF00488 MutS domain V ALE3EI_RS06610 PF05188 MutS domain II ALE3EI_RS06610 PF05192 MutS domain III ALE3EI_RS06610 PF01624 MutS domain I ALE3EI_RS06610 PF05190 MutS family domain IV ALE3EI_RS06625 PF08818 Domain of unknown function (DU1801) ALE3EI_RS06685 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALE3EI_RS06690 PF16363 GDP-mannose 4,6 dehydratase ALE3EI_RS06695 PF01979 Amidohydrolase family ALE3EI_RS06705 PF00698 Acyl transferase domain ALE3EI_RS06710 PF03881 Fructosamine kinase ALE3EI_RS06715 PF00186 Dihydrofolate reductase ALE3EI_RS06735 PF10017 Histidine-specific methyltransferase, SAM-dependent ALE3EI_RS06740 PF12867 DinB superfamily ALE3EI_RS06740 PF03781 Sulfatase-modifying factor enzyme 1 ALE3EI_RS06755 PF00303 Thymidylate synthase ALE3EI_RS06760 PF07662 Na+ dependent nucleoside transporter C-terminus ALE3EI_RS06760 PF07670 Nucleoside recognition ALE3EI_RS06760 PF01773 Na+ dependent nucleoside transporter N-terminus ALE3EI_RS06770 PF01012 Electron transfer flavoprotein domain ALE3EI_RS06770 PF00766 Electron transfer flavoprotein FAD-binding domain ALE3EI_RS06780 PF00364 Biotin-requiring enzyme ALE3EI_RS06780 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS06780 PF02780 Transketolase, C-terminal domain ALE3EI_RS06785 PF00593 TonB dependent receptor ALE3EI_RS06785 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS06790 PF01551 Peptidase family M23 ALE3EI_RS06795 PF03030 Inorganic H+ pyrophosphatase ALE3EI_RS06800 PF13194 Domain of unknown function (DUF4010) ALE3EI_RS06810 PF13089 Polyphosphate kinase N-terminal domain ALE3EI_RS06810 PF17941 Polyphosphate kinase C-terminal domain 1 ALE3EI_RS06810 PF13090 Polyphosphate kinase C-terminal domain 2 ALE3EI_RS06810 PF02503 Polyphosphate kinase middle domain ALE3EI_RS06815 PF01712 Deoxynucleoside kinase ALE3EI_RS06835 PF00593 TonB dependent receptor ALE3EI_RS06835 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS06855 PF17922 Tetracyclin repressor-like, C-terminal domain ALE3EI_RS06855 PF00440 Bacterial regulatory proteins, tetR family ALE3EI_RS06860 PF00111 2Fe-2S iron-sulfur cluster binding domain ALE3EI_RS06860 PF00970 Oxidoreductase FAD-binding domain ALE3EI_RS06860 PF00175 Oxidoreductase NAD-binding domain ALE3EI_RS06865 PF05138 Phenylacetic acid catabolic protein ALE3EI_RS06870 PF06243 Phenylacetic acid degradation B ALE3EI_RS06875 PF05138 Phenylacetic acid catabolic protein ALE3EI_RS06880 PF01883 Iron-sulfur cluster assembly protein ALE3EI_RS06890 PF00378 Enoyl-CoA hydratase/isomerase ALE3EI_RS06895 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ALE3EI_RS06895 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALE3EI_RS06895 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS06905 PF02803 Thiolase, C-terminal domain ALE3EI_RS06905 PF00108 Thiolase, N-terminal domain ALE3EI_RS06915 PF00171 Aldehyde dehydrogenase family ALE3EI_RS06915 PF01575 MaoC like domain ALE3EI_RS06925 PF00132 Bacterial transferase hexapeptide (six repeats) ALE3EI_RS06930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALE3EI_RS06930 PF00364 Biotin-requiring enzyme ALE3EI_RS06930 PF02817 e3 binding domain ALE3EI_RS06935 PF01063 Amino-transferase class IV ALE3EI_RS06940 PF02780 Transketolase, C-terminal domain ALE3EI_RS06940 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS06955 PF01175 Urocanase Rossmann-like domain ALE3EI_RS06955 PF17392 Urocanase C-terminal domain ALE3EI_RS06955 PF17391 Urocanase N-terminal domain ALE3EI_RS06995 PF00291 Pyridoxal-phosphate dependent enzyme ALE3EI_RS07000 PF01476 LysM domain ALE3EI_RS07000 PF00877 NlpC/P60 family ALE3EI_RS07005 PF00202 Aminotransferase class-III ALE3EI_RS07020 PF00704 Glycosyl hydrolases family 18 ALE3EI_RS07020 PF00041 Fibronectin type III domain ALE3EI_RS07045 PF01336 OB-fold nucleic acid binding domain ALE3EI_RS07045 PF00152 tRNA synthetases class II (D, K and N) ALE3EI_RS07055 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS07055 PF00072 Response regulator receiver domain ALE3EI_RS07060 PF01679 Proteolipid membrane potential modulator ALE3EI_RS07070 PF03099 Biotin/lipoate A/B protein ligase family ALE3EI_RS07080 PF00691 OmpA family ALE3EI_RS07080 PF13677 Membrane MotB of proton-channel complex MotA/MotB ALE3EI_RS07100 PF07495 Y_Y_Y domain ALE3EI_RS07100 PF12833 Helix-turn-helix domain ALE3EI_RS07100 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS07100 PF00072 Response regulator receiver domain ALE3EI_RS07100 PF07494 Two component regulator propeller ALE3EI_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS07110 PF01351 Ribonuclease HII ALE3EI_RS07150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALE3EI_RS07150 PF02770 Acyl-CoA dehydrogenase, middle domain ALE3EI_RS07150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS07155 PF03702 Anhydro-N-acetylmuramic acid kinase ALE3EI_RS07160 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALE3EI_RS07160 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALE3EI_RS07165 PF03600 Citrate transporter ALE3EI_RS07170 PF01618 MotA/TolQ/ExbB proton channel family ALE3EI_RS07175 PF02472 Biopolymer transport protein ExbD/TolR ALE3EI_RS07190 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS07190 PF08245 Mur ligase middle domain ALE3EI_RS07205 PF01225 Mur ligase family, catalytic domain ALE3EI_RS07205 PF08245 Mur ligase middle domain ALE3EI_RS07205 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS07210 PF03781 Sulfatase-modifying factor enzyme 1 ALE3EI_RS07225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALE3EI_RS07230 PF00676 Dehydrogenase E1 component ALE3EI_RS07235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALE3EI_RS07235 PF02817 e3 binding domain ALE3EI_RS07235 PF00364 Biotin-requiring enzyme ALE3EI_RS07250 PF01050 Mannose-6-phosphate isomerase ALE3EI_RS07250 PF00483 Nucleotidyl transferase ALE3EI_RS07260 PF00005 ABC transporter ALE3EI_RS07265 PF02405 Permease MlaE ALE3EI_RS07270 PF00245 Alkaline phosphatase ALE3EI_RS07275 PF00535 Glycosyl transferase family 2 ALE3EI_RS07285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALE3EI_RS07285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALE3EI_RS07290 PF02347 Glycine cleavage system P-protein ALE3EI_RS07310 PF01432 Peptidase family M3 ALE3EI_RS07315 PF00731 AIR carboxylase ALE3EI_RS07320 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ALE3EI_RS07320 PF02222 ATP-grasp domain ALE3EI_RS07330 PF01926 50S ribosome-binding GTPase ALE3EI_RS07330 PF01018 GTP1/OBG ALE3EI_RS07345 PF02875 Mur ligase family, glutamate ligase domain ALE3EI_RS07345 PF01225 Mur ligase family, catalytic domain ALE3EI_RS07345 PF08245 Mur ligase middle domain ALE3EI_RS07360 PF04002 RadC-like JAB domain ALE3EI_RS07390 PF00004 ATPase family associated with various cellular activities (AAA) ALE3EI_RS07390 PF16193 AAA C-terminal domain ALE3EI_RS07390 PF12002 MgsA AAA+ ATPase C terminal ALE3EI_RS07400 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALE3EI_RS07400 PF00588 SpoU rRNA Methylase family ALE3EI_RS07415 PF00593 TonB dependent receptor ALE3EI_RS07415 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS07425 PF00164 Ribosomal protein S12/S23 ALE3EI_RS07430 PF00177 Ribosomal protein S7p/S5e ALE3EI_RS07435 PF03144 Elongation factor Tu domain 2 ALE3EI_RS07435 PF00679 Elongation factor G C-terminus ALE3EI_RS07435 PF14492 Elongation Factor G, domain II ALE3EI_RS07435 PF03764 Elongation factor G, domain IV ALE3EI_RS07435 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS07440 PF00338 Ribosomal protein S10p/S20e ALE3EI_RS07445 PF00297 Ribosomal protein L3 ALE3EI_RS07450 PF00573 Ribosomal protein L4/L1 family ALE3EI_RS07455 PF00276 Ribosomal protein L23 ALE3EI_RS07460 PF03947 Ribosomal Proteins L2, C-terminal domain ALE3EI_RS07460 PF00181 Ribosomal Proteins L2, RNA binding domain ALE3EI_RS07465 PF00203 Ribosomal protein S19 ALE3EI_RS07470 PF00237 Ribosomal protein L22p/L17e ALE3EI_RS07475 PF00189 Ribosomal protein S3, C-terminal domain ALE3EI_RS07475 PF07650 KH domain ALE3EI_RS07480 PF00252 Ribosomal protein L16p/L10e ALE3EI_RS07485 PF00831 Ribosomal L29 protein ALE3EI_RS07490 PF00366 Ribosomal protein S17 ALE3EI_RS07495 PF00238 Ribosomal protein L14p/L23e ALE3EI_RS07500 PF00467 KOW motif ALE3EI_RS07500 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ALE3EI_RS07505 PF00673 ribosomal L5P family C-terminus ALE3EI_RS07505 PF00281 Ribosomal protein L5 ALE3EI_RS07510 PF00253 Ribosomal protein S14p/S29e ALE3EI_RS07515 PF00410 Ribosomal protein S8 ALE3EI_RS07520 PF00347 Ribosomal protein L6 ALE3EI_RS07525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ALE3EI_RS07530 PF00333 Ribosomal protein S5, N-terminal domain ALE3EI_RS07530 PF03719 Ribosomal protein S5, C-terminal domain ALE3EI_RS07535 PF00327 Ribosomal protein L30p/L7e ALE3EI_RS07540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ALE3EI_RS07545 PF00344 SecY translocase ALE3EI_RS07550 PF01176 Translation initiation factor 1A / IF-1 ALE3EI_RS07555 PF00444 Ribosomal protein L36 ALE3EI_RS07560 PF00416 Ribosomal protein S13/S18 ALE3EI_RS07565 PF00411 Ribosomal protein S11 ALE3EI_RS07570 PF00163 Ribosomal protein S4/S9 N-terminal domain ALE3EI_RS07570 PF01479 S4 domain ALE3EI_RS07575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ALE3EI_RS07575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ALE3EI_RS07575 PF01000 RNA polymerase Rpb3/RpoA insert domain ALE3EI_RS07580 PF01196 Ribosomal protein L17 ALE3EI_RS07585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALE3EI_RS07585 PF00117 Glutamine amidotransferase class-I ALE3EI_RS07590 PF03952 Enolase, N-terminal domain ALE3EI_RS07590 PF00113 Enolase, C-terminal TIM barrel domain ALE3EI_RS07595 PF00285 Citrate synthase, C-terminal domain ALE3EI_RS07615 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS07615 PF08338 Domain of unknown function (DUF1731) ALE3EI_RS07625 PF05746 DALR anticodon binding domain ALE3EI_RS07625 PF00750 tRNA synthetases class I (R) ALE3EI_RS07625 PF03485 Arginyl tRNA synthetase N terminal domain ALE3EI_RS07650 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS07650 PF00072 Response regulator receiver domain ALE3EI_RS07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS07655 PF07730 Histidine kinase ALE3EI_RS07655 PF05231 MASE1 ALE3EI_RS07740 PF00270 DEAD/DEAH box helicase ALE3EI_RS07740 PF00271 Helicase conserved C-terminal domain ALE3EI_RS07750 PF02978 Signal peptide binding domain ALE3EI_RS07750 PF02881 SRP54-type protein, helical bundle domain ALE3EI_RS07750 PF00448 SRP54-type protein, GTPase domain ALE3EI_RS07755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ALE3EI_RS07755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ALE3EI_RS07760 PF06803 Protein of unknown function (DUF1232) ALE3EI_RS07805 PF05872 Bacterial protein of unknown function (DUF853) ALE3EI_RS07810 PF01042 Endoribonuclease L-PSP ALE3EI_RS07815 PF04055 Radical SAM superfamily ALE3EI_RS07825 PF00204 DNA gyrase B ALE3EI_RS07825 PF01751 Toprim domain ALE3EI_RS07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS07825 PF00986 DNA gyrase B subunit, carboxyl terminus ALE3EI_RS07835 PF00056 lactate/malate dehydrogenase, NAD binding domain ALE3EI_RS07835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALE3EI_RS07840 PF02355 Protein export membrane protein ALE3EI_RS07840 PF07549 SecD/SecF GG Motif ALE3EI_RS07850 PF01790 Prolipoprotein diacylglyceryl transferase ALE3EI_RS07855 PF01809 Putative membrane protein insertion efficiency factor ALE3EI_RS07860 PF09190 DALR domain ALE3EI_RS07860 PF01406 tRNA synthetases class I (C) catalytic domain ALE3EI_RS07865 PF01227 GTP cyclohydrolase I ALE3EI_RS07890 PF03129 Anticodon binding domain ALE3EI_RS07890 PF09180 Prolyl-tRNA synthetase, C-terminal ALE3EI_RS07890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALE3EI_RS07900 PF01649 Ribosomal protein S20 ALE3EI_RS07935 PF01914 MarC family integral membrane protein ALE3EI_RS07960 PF12697 Alpha/beta hydrolase family ALE3EI_RS07970 PF01979 Amidohydrolase family ALE3EI_RS07985 PF00144 Beta-lactamase ALE3EI_RS08010 PF14870 Photosynthesis system II assembly factor YCF48 ALE3EI_RS08060 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system ALE3EI_RS08095 PF04471 Restriction endonuclease ALE3EI_RS08120 PF01022 Bacterial regulatory protein, arsR family ALE3EI_RS08125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALE3EI_RS08125 PF18766 SWI2/SNF2 ATPase ALE3EI_RS08125 PF12008 Type I restriction and modification enzyme - subunit R C terminal ALE3EI_RS08135 PF01420 Type I restriction modification DNA specificity domain ALE3EI_RS08140 PF12161 HsdM N-terminal domain ALE3EI_RS08140 PF02384 N-6 DNA Methylase ALE3EI_RS08170 PF02899 Phage integrase, N-terminal SAM-like domain ALE3EI_RS08170 PF00589 Phage integrase family ALE3EI_RS08175 PF01467 Cytidylyltransferase-like ALE3EI_RS08180 PF01820 D-ala D-ala ligase N-terminus ALE3EI_RS08180 PF07478 D-ala D-ala ligase C-terminus ALE3EI_RS08190 PF00849 RNA pseudouridylate synthase ALE3EI_RS08190 PF01479 S4 domain ALE3EI_RS08195 PF03883 Peroxide stress protein YaaA ALE3EI_RS08220 PF17070 30S ribosomal protein Thx ALE3EI_RS08230 PF00290 Tryptophan synthase alpha chain ALE3EI_RS08235 PF00291 Pyridoxal-phosphate dependent enzyme ALE3EI_RS08240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ALE3EI_RS08245 PF00218 Indole-3-glycerol phosphate synthase ALE3EI_RS08250 PF00591 Glycosyl transferase family, a/b domain ALE3EI_RS08250 PF02885 Glycosyl transferase family, helical bundle domain ALE3EI_RS08255 PF00117 Glutamine amidotransferase class-I ALE3EI_RS08260 PF04715 Anthranilate synthase component I, N terminal region ALE3EI_RS08260 PF00425 chorismate binding enzyme ALE3EI_RS08280 PF01047 MarR family ALE3EI_RS08285 PF00578 AhpC/TSA family ALE3EI_RS08295 PF00581 Rhodanese-like domain ALE3EI_RS08300 PF17773 UPF0176 acylphosphatase like domain ALE3EI_RS08300 PF00581 Rhodanese-like domain ALE3EI_RS08300 PF12368 Rhodanase C-terminal ALE3EI_RS08340 PF06123 Inner membrane protein CreD ALE3EI_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS08360 PF09308 LuxQ, periplasmic ALE3EI_RS08360 PF00072 Response regulator receiver domain ALE3EI_RS08360 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS08370 PF00793 DAHP synthetase I family ALE3EI_RS08375 PF00679 Elongation factor G C-terminus ALE3EI_RS08375 PF03144 Elongation factor Tu domain 2 ALE3EI_RS08375 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS08375 PF14492 Elongation Factor G, domain II ALE3EI_RS08410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALE3EI_RS08430 PF13439 Glycosyltransferase Family 4 ALE3EI_RS08430 PF00534 Glycosyl transferases group 1 ALE3EI_RS08435 PF05523 WxcM-like, C-terminal ALE3EI_RS08440 PF00535 Glycosyl transferase family 2 ALE3EI_RS08450 PF00082 Subtilase family ALE3EI_RS08460 PF00005 ABC transporter ALE3EI_RS08485 PF07969 Amidohydrolase family ALE3EI_RS08520 PF07075 Protein of unknown function (DUF1343) ALE3EI_RS08525 PF12704 MacB-like periplasmic core domain ALE3EI_RS08525 PF02687 FtsX-like permease family ALE3EI_RS08530 PF00291 Pyridoxal-phosphate dependent enzyme ALE3EI_RS08530 PF00571 CBS domain ALE3EI_RS08550 PF07885 Ion channel ALE3EI_RS08550 PF02254 TrkA-N domain ALE3EI_RS08555 PF01235 Sodium:alanine symporter family ALE3EI_RS08565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS08565 PF02770 Acyl-CoA dehydrogenase, middle domain ALE3EI_RS08565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALE3EI_RS08575 PF01165 Ribosomal protein S21 ALE3EI_RS08580 PF02899 Phage integrase, N-terminal SAM-like domain ALE3EI_RS08580 PF00589 Phage integrase family ALE3EI_RS08585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ALE3EI_RS08585 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ALE3EI_RS08610 PF03144 Elongation factor Tu domain 2 ALE3EI_RS08610 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS08610 PF03143 Elongation factor Tu C-terminal domain ALE3EI_RS08620 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ALE3EI_RS08625 PF00467 KOW motif ALE3EI_RS08625 PF02357 Transcription termination factor nusG ALE3EI_RS08630 PF03946 Ribosomal protein L11, N-terminal domain ALE3EI_RS08630 PF00298 Ribosomal protein L11, RNA binding domain ALE3EI_RS08635 PF00687 Ribosomal protein L1p/L10e family ALE3EI_RS08640 PF00466 Ribosomal protein L10 ALE3EI_RS08645 PF00542 Ribosomal protein L7/L12 C-terminal domain ALE3EI_RS08645 PF16320 Ribosomal protein L7/L12 dimerisation domain ALE3EI_RS08650 PF04563 RNA polymerase beta subunit ALE3EI_RS08650 PF04561 RNA polymerase Rpb2, domain 2 ALE3EI_RS08650 PF04565 RNA polymerase Rpb2, domain 3 ALE3EI_RS08650 PF04560 RNA polymerase Rpb2, domain 7 ALE3EI_RS08650 PF00562 RNA polymerase Rpb2, domain 6 ALE3EI_RS08650 PF10385 RNA polymerase beta subunit external 1 domain ALE3EI_RS08655 PF04997 RNA polymerase Rpb1, domain 1 ALE3EI_RS08655 PF05000 RNA polymerase Rpb1, domain 4 ALE3EI_RS08655 PF04983 RNA polymerase Rpb1, domain 3 ALE3EI_RS08655 PF00623 RNA polymerase Rpb1, domain 2 ALE3EI_RS08655 PF04998 RNA polymerase Rpb1, domain 5 ALE3EI_RS08675 PF03144 Elongation factor Tu domain 2 ALE3EI_RS08675 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS08675 PF16658 Class II release factor RF3, C-terminal domain ALE3EI_RS08695 PF00223 Photosystem I psaA/psaB protein ALE3EI_RS08695 PF00691 OmpA family ALE3EI_RS08700 PF00293 NUDIX domain ALE3EI_RS08710 PF01238 Phosphomannose isomerase type I ALE3EI_RS08755 PF00183 Hsp90 protein ALE3EI_RS08760 PF00326 Prolyl oligopeptidase family ALE3EI_RS08760 PF07676 WD40-like Beta Propeller Repeat ALE3EI_RS08760 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ALE3EI_RS08765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALE3EI_RS08765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALE3EI_RS08780 PF00474 Sodium:solute symporter family ALE3EI_RS08790 PF13662 Toprim domain ALE3EI_RS08790 PF02132 RecR protein ALE3EI_RS08800 PF00364 Biotin-requiring enzyme ALE3EI_RS08800 PF02817 e3 binding domain ALE3EI_RS08800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALE3EI_RS08810 PF00929 Exonuclease ALE3EI_RS08815 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALE3EI_RS08825 PF02464 Competence-damaged protein ALE3EI_RS08825 PF18146 Damage-inducible protein CinA KH domain ALE3EI_RS08825 PF00994 Probable molybdopterin binding domain ALE3EI_RS08830 PF00830 Ribosomal L28 family ALE3EI_RS08835 PF00471 Ribosomal protein L33 ALE3EI_RS08845 PF00448 SRP54-type protein, GTPase domain ALE3EI_RS08845 PF02881 SRP54-type protein, helical bundle domain ALE3EI_RS08855 PF00919 Uncharacterized protein family UPF0004 ALE3EI_RS08855 PF04055 Radical SAM superfamily ALE3EI_RS08855 PF18693 TRAM domain ALE3EI_RS08890 PF10079 Bacillithiol biosynthesis BshC ALE3EI_RS08895 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ALE3EI_RS08895 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ALE3EI_RS08905 PF00117 Glutamine amidotransferase class-I ALE3EI_RS08905 PF00958 GMP synthase C terminal domain ALE3EI_RS08905 PF02540 NAD synthase ALE3EI_RS08925 PF12843 Putative quorum-sensing-regulated virulence factor ALE3EI_RS08930 PF00117 Glutamine amidotransferase class-I ALE3EI_RS08930 PF06418 CTP synthase N-terminus ALE3EI_RS08935 PF02096 60Kd inner membrane protein ALE3EI_RS08935 PF14849 YidC periplasmic domain ALE3EI_RS08950 PF00082 Subtilase family ALE3EI_RS08955 PF03060 Nitronate monooxygenase ALE3EI_RS08975 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALE3EI_RS08975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALE3EI_RS08980 PF08442 ATP-grasp domain ALE3EI_RS08980 PF00549 CoA-ligase ALE3EI_RS08995 PF10011 Predicted membrane protein (DUF2254) ALE3EI_RS09000 PF00011 Hsp20/alpha crystallin family ALE3EI_RS09005 PF00849 RNA pseudouridylate synthase ALE3EI_RS09005 PF01479 S4 domain ALE3EI_RS09020 PF12344 Ultra-violet resistance protein B ALE3EI_RS09020 PF04851 Type III restriction enzyme, res subunit ALE3EI_RS09020 PF17757 UvrB interaction domain ALE3EI_RS09020 PF00271 Helicase conserved C-terminal domain ALE3EI_RS09030 PF13649 Methyltransferase domain ALE3EI_RS09050 PF00005 ABC transporter ALE3EI_RS09070 PF02628 Cytochrome oxidase assembly protein ALE3EI_RS09080 PF02272 DHHA1 domain ALE3EI_RS09080 PF00571 CBS domain ALE3EI_RS09080 PF01743 Poly A polymerase head domain ALE3EI_RS09080 PF01368 DHH family ALE3EI_RS09085 PF01300 Telomere recombination ALE3EI_RS09100 PF00535 Glycosyl transferase family 2 ALE3EI_RS09115 PF00535 Glycosyl transferase family 2 ALE3EI_RS09130 PF00535 Glycosyl transferase family 2 ALE3EI_RS09150 PF00132 Bacterial transferase hexapeptide (six repeats) ALE3EI_RS09150 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ALE3EI_RS09150 PF14602 Hexapeptide repeat of succinyl-transferase ALE3EI_RS09155 PF03652 Holliday junction resolvase ALE3EI_RS09160 PF01327 Polypeptide deformylase ALE3EI_RS09170 PF03819 MazG nucleotide pyrophosphohydrolase domain ALE3EI_RS09185 PF08501 Shikimate dehydrogenase substrate binding domain ALE3EI_RS09185 PF01488 Shikimate / quinate 5-dehydrogenase ALE3EI_RS09185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ALE3EI_RS09205 PF00202 Aminotransferase class-III ALE3EI_RS09215 PF00709 Adenylosuccinate synthetase ALE3EI_RS09220 PF01475 Ferric uptake regulator family ALE3EI_RS09225 PF04607 Region found in RelA / SpoT proteins ALE3EI_RS09225 PF02824 TGS domain ALE3EI_RS09225 PF13291 ACT domain ALE3EI_RS09230 PF16491 CAAX prenyl protease N-terminal, five membrane helices ALE3EI_RS09230 PF01435 Peptidase family M48 ALE3EI_RS09240 PF00588 SpoU rRNA Methylase family ALE3EI_RS09240 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALE3EI_RS09260 PF01979 Amidohydrolase family ALE3EI_RS09270 PF07687 Peptidase dimerisation domain ALE3EI_RS09270 PF01546 Peptidase family M20/M25/M40 ALE3EI_RS09275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALE3EI_RS09285 PF01368 DHH family ALE3EI_RS09285 PF02272 DHHA1 domain ALE3EI_RS09290 PF00334 Nucleoside diphosphate kinase ALE3EI_RS09305 PF02463 RecF/RecN/SMC N terminal domain ALE3EI_RS09315 PF00885 6,7-dimethyl-8-ribityllumazine synthase ALE3EI_RS09325 PF08676 MutL C terminal dimerisation domain ALE3EI_RS09325 PF01119 DNA mismatch repair protein, C-terminal domain ALE3EI_RS09350 PF10502 Signal peptidase, peptidase S26 ALE3EI_RS09355 PF01113 Dihydrodipicolinate reductase, N-terminus ALE3EI_RS09355 PF05173 Dihydrodipicolinate reductase, C-terminus ALE3EI_RS09365 PF17762 HTH domain found in ParB protein ALE3EI_RS09365 PF02195 ParB-like nuclease domain ALE3EI_RS09370 PF13614 AAA domain ALE3EI_RS09390 PF02310 B12 binding domain ALE3EI_RS09390 PF01642 Methylmalonyl-CoA mutase ALE3EI_RS09400 PF01642 Methylmalonyl-CoA mutase ALE3EI_RS09410 PF00485 Phosphoribulokinase / Uridine kinase family ALE3EI_RS09415 PF00034 Cytochrome c ALE3EI_RS09415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALE3EI_RS09420 PF07995 Glucose / Sorbosone dehydrogenase ALE3EI_RS09440 PF03600 Citrate transporter ALE3EI_RS09440 PF02080 TrkA-C domain ALE3EI_RS09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALE3EI_RS09505 PF03466 LysR substrate binding domain ALE3EI_RS09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALE3EI_RS09515 PF17863 AAA lid domain ALE3EI_RS09515 PF07726 ATPase family associated with various cellular activities (AAA) ALE3EI_RS09545 PF03458 UPF0126 domain ALE3EI_RS09550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALE3EI_RS09575 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALE3EI_RS09585 PF00072 Response regulator receiver domain ALE3EI_RS09585 PF00211 Adenylate and Guanylate cyclase catalytic domain ALE3EI_RS09590 PF08818 Domain of unknown function (DU1801) ALE3EI_RS09615 PF07694 5TMR of 5TMR-LYT ALE3EI_RS09615 PF06580 Histidine kinase ALE3EI_RS09615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS09630 PF04397 LytTr DNA-binding domain ALE3EI_RS09630 PF00072 Response regulator receiver domain ALE3EI_RS09635 PF01209 ubiE/COQ5 methyltransferase family ALE3EI_RS09665 PF04542 Sigma-70 region 2 ALE3EI_RS09665 PF08281 Sigma-70, region 4 ALE3EI_RS09695 PF00326 Prolyl oligopeptidase family ALE3EI_RS09710 PF04972 BON domain ALE3EI_RS09710 PF01476 LysM domain ALE3EI_RS09715 PF02469 Fasciclin domain ALE3EI_RS09720 PF01979 Amidohydrolase family ALE3EI_RS09725 PF00781 Diacylglycerol kinase catalytic domain ALE3EI_RS09745 PF04151 Bacterial pre-peptidase C-terminal domain ALE3EI_RS09745 PF04389 Peptidase family M28 ALE3EI_RS09765 PF02770 Acyl-CoA dehydrogenase, middle domain ALE3EI_RS09765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALE3EI_RS09765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS09770 PF00108 Thiolase, N-terminal domain ALE3EI_RS09770 PF02803 Thiolase, C-terminal domain ALE3EI_RS09775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS09775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALE3EI_RS09775 PF00378 Enoyl-CoA hydratase/isomerase ALE3EI_RS09785 PF00501 AMP-binding enzyme ALE3EI_RS09790 PF05547 Immune inhibitor A peptidase M6 ALE3EI_RS09795 PF02769 AIR synthase related protein, C-terminal domain ALE3EI_RS09795 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ALE3EI_RS09795 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ALE3EI_RS09810 PF01189 16S rRNA methyltransferase RsmB/F ALE3EI_RS09810 PF01029 NusB family ALE3EI_RS09830 PF08281 Sigma-70, region 4 ALE3EI_RS09830 PF04542 Sigma-70 region 2 ALE3EI_RS09835 PF00005 ABC transporter ALE3EI_RS09835 PF00664 ABC transporter transmembrane region ALE3EI_RS09840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALE3EI_RS09840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALE3EI_RS09840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALE3EI_RS09840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALE3EI_RS09845 PF00535 Glycosyl transferase family 2 ALE3EI_RS09855 PF01197 Ribosomal protein L31 ALE3EI_RS09880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALE3EI_RS09890 PF00919 Uncharacterized protein family UPF0004 ALE3EI_RS09890 PF01938 TRAM domain ALE3EI_RS09890 PF04055 Radical SAM superfamily ALE3EI_RS09925 PF00468 Ribosomal protein L34 ALE3EI_RS09930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALE3EI_RS09930 PF02142 MGS-like domain ALE3EI_RS09930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALE3EI_RS09945 PF02646 RmuC family ALE3EI_RS09950 PF00005 ABC transporter ALE3EI_RS09955 PF01032 FecCD transport family ALE3EI_RS09965 PF00593 TonB dependent receptor ALE3EI_RS09965 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS09985 PF08281 Sigma-70, region 4 ALE3EI_RS09985 PF04542 Sigma-70 region 2 ALE3EI_RS10005 PF08328 Adenylosuccinate lyase C-terminal ALE3EI_RS10005 PF00206 Lyase ALE3EI_RS10020 PF02146 Sir2 family ALE3EI_RS10025 PF00588 SpoU rRNA Methylase family ALE3EI_RS10040 PF01725 Ham1 family ALE3EI_RS10045 PF03880 DbpA RNA binding domain ALE3EI_RS10045 PF00270 DEAD/DEAH box helicase ALE3EI_RS10045 PF00271 Helicase conserved C-terminal domain ALE3EI_RS10055 PF00171 Aldehyde dehydrogenase family ALE3EI_RS10065 PF02590 Predicted SPOUT methyltransferase ALE3EI_RS10070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ALE3EI_RS10070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ALE3EI_RS10090 PF18074 Primosomal protein N C-terminal domain ALE3EI_RS10090 PF00271 Helicase conserved C-terminal domain ALE3EI_RS10090 PF17764 3′ DNA-binding domain (3′BD) ALE3EI_RS10090 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ALE3EI_RS10090 PF04851 Type III restriction enzyme, res subunit ALE3EI_RS10095 PF00072 Response regulator receiver domain ALE3EI_RS10095 PF04397 LytTr DNA-binding domain ALE3EI_RS10100 PF01250 Ribosomal protein S6 ALE3EI_RS10105 PF01084 Ribosomal protein S18 ALE3EI_RS10110 PF03948 Ribosomal protein L9, C-terminal domain ALE3EI_RS10110 PF01281 Ribosomal protein L9, N-terminal domain ALE3EI_RS10120 PF02687 FtsX-like permease family ALE3EI_RS10120 PF12704 MacB-like periplasmic core domain ALE3EI_RS10120 PF00005 ABC transporter ALE3EI_RS10125 PF13393 Histidyl-tRNA synthetase ALE3EI_RS10125 PF03129 Anticodon binding domain ALE3EI_RS10145 PF02080 TrkA-C domain ALE3EI_RS10145 PF02254 TrkA-N domain ALE3EI_RS10170 PF00011 Hsp20/alpha crystallin family ALE3EI_RS10175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS10175 PF07730 Histidine kinase ALE3EI_RS10175 PF00672 HAMP domain ALE3EI_RS10195 PF02622 Uncharacterized ACR, COG1678 ALE3EI_RS10200 PF00216 Bacterial DNA-binding protein ALE3EI_RS10205 PF00551 Formyl transferase ALE3EI_RS10205 PF02911 Formyl transferase, C-terminal domain ALE3EI_RS10210 PF00570 HRDC domain ALE3EI_RS10210 PF00270 DEAD/DEAH box helicase ALE3EI_RS10210 PF00271 Helicase conserved C-terminal domain ALE3EI_RS10210 PF16124 RecQ zinc-binding ALE3EI_RS10210 PF09382 RQC domain ALE3EI_RS10230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALE3EI_RS10245 PF03441 FAD binding domain of DNA photolyase ALE3EI_RS10245 PF00875 DNA photolyase ALE3EI_RS10255 PF00230 Major intrinsic protein ALE3EI_RS10275 PF02585 GlcNAc-PI de-N-acetylase ALE3EI_RS10290 PF02545 Maf-like protein ALE3EI_RS10325 PF05140 ResB-like family ALE3EI_RS10325 PF01578 Cytochrome C assembly protein ALE3EI_RS10335 PF10415 Fumarase C C-terminus ALE3EI_RS10335 PF00206 Lyase ALE3EI_RS10345 PF00593 TonB dependent receptor ALE3EI_RS10345 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS10350 PF03960 ArsC family ALE3EI_RS10360 PF00583 Acetyltransferase (GNAT) family ALE3EI_RS10360 PF01047 MarR family ALE3EI_RS10380 PF01212 Beta-eliminating lyase ALE3EI_RS10385 PF07411 Domain of unknown function (DUF1508) ALE3EI_RS10390 PF02575 YbaB/EbfC DNA-binding family ALE3EI_RS10395 PF00326 Prolyl oligopeptidase family ALE3EI_RS10395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ALE3EI_RS10400 PF00571 CBS domain ALE3EI_RS10400 PF00291 Pyridoxal-phosphate dependent enzyme ALE3EI_RS10405 PF00155 Aminotransferase class I and II ALE3EI_RS10455 PF17760 UvrA interaction domain ALE3EI_RS10455 PF00005 ABC transporter ALE3EI_RS10455 PF17755 UvrA DNA-binding domain ALE3EI_RS10470 PF00730 HhH-GPD superfamily base excision DNA repair protein ALE3EI_RS10470 PF00633 Helix-hairpin-helix motif ALE3EI_RS10470 PF10576 Iron-sulfur binding domain of endonuclease III ALE3EI_RS10475 PF00578 AhpC/TSA family ALE3EI_RS10485 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS10510 PF01979 Amidohydrolase family ALE3EI_RS10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS10520 PF00360 Phytochrome region ALE3EI_RS10520 PF08446 PAS fold ALE3EI_RS10520 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS10520 PF01590 GAF domain ALE3EI_RS10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS10525 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS10535 PF00005 ABC transporter ALE3EI_RS10545 PF01625 Peptide methionine sulfoxide reductase ALE3EI_RS10550 PF01227 GTP cyclohydrolase I ALE3EI_RS10560 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS10560 PF00593 TonB dependent receptor ALE3EI_RS10585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALE3EI_RS10585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALE3EI_RS10590 PF00266 Aminotransferase class-V ALE3EI_RS10600 PF00037 4Fe-4S binding domain ALE3EI_RS10630 PF01926 50S ribosome-binding GTPase ALE3EI_RS10630 PF06071 Protein of unknown function (DUF933) ALE3EI_RS10640 PF00204 DNA gyrase B ALE3EI_RS10640 PF01751 Toprim domain ALE3EI_RS10640 PF00986 DNA gyrase B subunit, carboxyl terminus ALE3EI_RS10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS10650 PF00521 DNA gyrase/topoisomerase IV, subunit A ALE3EI_RS10655 PF01741 Large-conductance mechanosensitive channel, MscL ALE3EI_RS10660 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS10660 PF00072 Response regulator receiver domain ALE3EI_RS10660 PF09308 LuxQ, periplasmic ALE3EI_RS10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS10680 PF01037 Lrp/AsnC ligand binding domain ALE3EI_RS10685 PF01965 DJ-1/PfpI family ALE3EI_RS10695 PF01761 3-dehydroquinate synthase ALE3EI_RS10700 PF01619 Proline dehydrogenase ALE3EI_RS10720 PF12833 Helix-turn-helix domain ALE3EI_RS10720 PF07883 Cupin domain ALE3EI_RS10730 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ALE3EI_RS10730 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ALE3EI_RS10745 PF05491 RuvB C-terminal winged helix domain ALE3EI_RS10745 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALE3EI_RS10745 PF17864 RuvB AAA lid domain ALE3EI_RS10750 PF00072 Response regulator receiver domain ALE3EI_RS10750 PF00158 Sigma-54 interaction domain ALE3EI_RS10750 PF02954 Bacterial regulatory protein, Fis family ALE3EI_RS10755 PF01966 HD domain ALE3EI_RS10760 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ALE3EI_RS10760 PF00132 Bacterial transferase hexapeptide (six repeats) ALE3EI_RS10765 PF07977 FabA-like domain ALE3EI_RS10765 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ALE3EI_RS10770 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ALE3EI_RS10770 PF00132 Bacterial transferase hexapeptide (six repeats) ALE3EI_RS10775 PF01132 Elongation factor P (EF-P) OB domain ALE3EI_RS10775 PF09285 Elongation factor P, C-terminal ALE3EI_RS10775 PF08207 Elongation factor P (EF-P) KOW-like domain ALE3EI_RS10780 PF00132 Bacterial transferase hexapeptide (six repeats) ALE3EI_RS10780 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ALE3EI_RS10790 PF00549 CoA-ligase ALE3EI_RS10790 PF02629 CoA binding domain ALE3EI_RS10810 PF00474 Sodium:solute symporter family ALE3EI_RS10815 PF00318 Ribosomal protein S2 ALE3EI_RS10825 PF01634 ATP phosphoribosyltransferase ALE3EI_RS10825 PF08029 HisG, C-terminal domain ALE3EI_RS10830 PF00815 Histidinol dehydrogenase ALE3EI_RS10835 PF00155 Aminotransferase class I and II ALE3EI_RS10840 PF08645 Polynucleotide kinase 3 phosphatase ALE3EI_RS10840 PF00475 Imidazoleglycerol-phosphate dehydratase ALE3EI_RS10845 PF00117 Glutamine amidotransferase class-I ALE3EI_RS10850 PF00977 Histidine biosynthesis protein ALE3EI_RS10855 PF00977 Histidine biosynthesis protein ALE3EI_RS10860 PF01502 Phosphoribosyl-AMP cyclohydrolase ALE3EI_RS10860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ALE3EI_RS10865 PF01544 CorA-like Mg2+ transporter protein ALE3EI_RS10895 PF00171 Aldehyde dehydrogenase family ALE3EI_RS10915 PF00924 Mechanosensitive ion channel ALE3EI_RS10920 PF12823 Domain of unknown function (DUF3817) ALE3EI_RS10925 PF12794 Mechanosensitive ion channel inner membrane domain 1 ALE3EI_RS10925 PF12795 Mechanosensitive ion channel porin domain ALE3EI_RS10925 PF00924 Mechanosensitive ion channel ALE3EI_RS10965 PF13677 Membrane MotB of proton-channel complex MotA/MotB ALE3EI_RS10965 PF00691 OmpA family ALE3EI_RS10970 PF05552 Conserved TM helix ALE3EI_RS10970 PF00924 Mechanosensitive ion channel ALE3EI_RS10975 PF04542 Sigma-70 region 2 ALE3EI_RS10975 PF04539 Sigma-70 region 3 ALE3EI_RS10975 PF04545 Sigma-70, region 4 ALE3EI_RS10975 PF03979 Sigma-70 factor, region 1.1 ALE3EI_RS10975 PF00140 Sigma-70 factor, region 1.2 ALE3EI_RS10985 PF00246 Zinc carboxypeptidase ALE3EI_RS11040 PF00313 'Cold-shock' DNA-binding domain ALE3EI_RS11045 PF02805 Metal binding domain of Ada ALE3EI_RS11045 PF12833 Helix-turn-helix domain ALE3EI_RS11075 PF00271 Helicase conserved C-terminal domain ALE3EI_RS11075 PF00270 DEAD/DEAH box helicase ALE3EI_RS11075 PF02559 CarD-like/TRCF domain ALE3EI_RS11075 PF03461 TRCF domain ALE3EI_RS11075 PF17757 UvrB interaction domain ALE3EI_RS11110 PF04264 YceI-like domain ALE3EI_RS11115 PF00072 Response regulator receiver domain ALE3EI_RS11115 PF00486 Transcriptional regulatory protein, C terminal ALE3EI_RS11125 PF01431 Peptidase family M13 ALE3EI_RS11125 PF05649 Peptidase family M13 ALE3EI_RS11130 PF07676 WD40-like Beta Propeller Repeat ALE3EI_RS11130 PF04052 TolB amino-terminal domain ALE3EI_RS11145 PF00313 'Cold-shock' DNA-binding domain ALE3EI_RS11155 PF00211 Adenylate and Guanylate cyclase catalytic domain ALE3EI_RS11165 PF05971 RNA methyltransferase ALE3EI_RS11175 PF07690 Major Facilitator Superfamily ALE3EI_RS11185 PF03741 Integral membrane protein TerC family ALE3EI_RS11205 PF17785 PUA-like domain ALE3EI_RS11205 PF10672 S-adenosylmethionine-dependent methyltransferase ALE3EI_RS11210 PF03741 Integral membrane protein TerC family ALE3EI_RS11215 PF00550 Phosphopantetheine attachment site ALE3EI_RS11220 PF00109 Beta-ketoacyl synthase, N-terminal domain ALE3EI_RS11220 PF02801 Beta-ketoacyl synthase, C-terminal domain ALE3EI_RS11225 PF07977 FabA-like domain ALE3EI_RS11235 PF02797 Chalcone and stilbene synthases, C-terminal domain ALE3EI_RS11235 PF00195 Chalcone and stilbene synthases, N-terminal domain ALE3EI_RS11245 PF01494 FAD binding domain ALE3EI_RS11250 PF05736 OprF membrane domain ALE3EI_RS11250 PF00691 OmpA family ALE3EI_RS11265 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS11265 PF02780 Transketolase, C-terminal domain ALE3EI_RS11280 PF01048 Phosphorylase superfamily ALE3EI_RS11290 PF03167 Uracil DNA glycosylase superfamily ALE3EI_RS11295 PF00488 MutS domain V ALE3EI_RS11295 PF01713 Smr domain ALE3EI_RS11300 PF04134 Protein of unknown function, DUF393 ALE3EI_RS11315 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ALE3EI_RS11315 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ALE3EI_RS11325 PF00375 Sodium:dicarboxylate symporter family ALE3EI_RS11330 PF01264 Chorismate synthase ALE3EI_RS11340 PF02913 FAD linked oxidases, C-terminal domain ALE3EI_RS11340 PF01565 FAD binding domain ALE3EI_RS11340 PF13183 4Fe-4S dicluster domain ALE3EI_RS11360 PF13439 Glycosyltransferase Family 4 ALE3EI_RS11360 PF00534 Glycosyl transferases group 1 ALE3EI_RS11365 PF01915 Glycosyl hydrolase family 3 C-terminal domain ALE3EI_RS11365 PF00933 Glycosyl hydrolase family 3 N terminal domain ALE3EI_RS11375 PF02665 Nitrate reductase gamma subunit ALE3EI_RS11375 PF02754 Cysteine-rich domain ALE3EI_RS11375 PF13183 4Fe-4S dicluster domain ALE3EI_RS11385 PF02754 Cysteine-rich domain ALE3EI_RS11385 PF13183 4Fe-4S dicluster domain ALE3EI_RS11395 PF01520 N-acetylmuramoyl-L-alanine amidase ALE3EI_RS11405 PF01042 Endoribonuclease L-PSP ALE3EI_RS11415 PF00814 Glycoprotease family ALE3EI_RS11435 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALE3EI_RS11435 PF00588 SpoU rRNA Methylase family ALE3EI_RS11475 PF01679 Proteolipid membrane potential modulator ALE3EI_RS11500 PF05974 Domain of unknown function (DUF892) ALE3EI_RS11505 PF00072 Response regulator receiver domain ALE3EI_RS11505 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS11505 PF12833 Helix-turn-helix domain ALE3EI_RS11505 PF07494 Two component regulator propeller ALE3EI_RS11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS11505 PF07495 Y_Y_Y domain ALE3EI_RS11520 PF01266 FAD dependent oxidoreductase ALE3EI_RS11520 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ALE3EI_RS11525 PF01966 HD domain ALE3EI_RS11525 PF07698 7TM receptor with intracellular HD hydrolase ALE3EI_RS11525 PF07697 7TM-HD extracellular ALE3EI_RS11530 PF00108 Thiolase, N-terminal domain ALE3EI_RS11530 PF02803 Thiolase, C-terminal domain ALE3EI_RS11535 PF00877 NlpC/P60 family ALE3EI_RS11540 PF01739 CheR methyltransferase, SAM binding domain ALE3EI_RS11545 PF00521 DNA gyrase/topoisomerase IV, subunit A ALE3EI_RS11545 PF03989 DNA gyrase C-terminal domain, beta-propeller ALE3EI_RS11550 PF10431 C-terminal, D2-small domain, of ClpB protein ALE3EI_RS11550 PF02861 Clp amino terminal domain, pathogenicity island component ALE3EI_RS11550 PF17871 AAA lid domain ALE3EI_RS11550 PF07724 AAA domain (Cdc48 subfamily) ALE3EI_RS11550 PF00004 ATPase family associated with various cellular activities (AAA) ALE3EI_RS11570 PF00221 Aromatic amino acid lyase ALE3EI_RS11575 PF08534 Redoxin ALE3EI_RS11580 PF03853 YjeF-related protein N-terminus ALE3EI_RS11580 PF01256 Carbohydrate kinase ALE3EI_RS11585 PF08669 Glycine cleavage T-protein C-terminal barrel domain ALE3EI_RS11585 PF01571 Aminomethyltransferase folate-binding domain ALE3EI_RS11595 PF01329 Pterin 4 alpha carbinolamine dehydratase ALE3EI_RS11600 PF11818 C-terminal domain of tail specific protease (DUF3340) ALE3EI_RS11600 PF00595 PDZ domain ALE3EI_RS11600 PF03572 Peptidase family S41 ALE3EI_RS11600 PF17804 Tail specific protease N-terminal domain ALE3EI_RS11605 PF01709 Transcriptional regulator ALE3EI_RS11620 PF00465 Iron-containing alcohol dehydrogenase ALE3EI_RS11630 PF14490 Helix-hairpin-helix containing domain ALE3EI_RS11630 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ALE3EI_RS11630 PF13538 UvrD-like helicase C-terminal domain ALE3EI_RS11660 PF12169 DNA polymerase III subunits gamma and tau domain III ALE3EI_RS11675 PF02541 Ppx/GppA phosphatase family ALE3EI_RS11680 PF13090 Polyphosphate kinase C-terminal domain 2 ALE3EI_RS11680 PF17941 Polyphosphate kinase C-terminal domain 1 ALE3EI_RS11680 PF13089 Polyphosphate kinase N-terminal domain ALE3EI_RS11680 PF02503 Polyphosphate kinase middle domain ALE3EI_RS11690 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ALE3EI_RS11690 PF01243 Pyridoxamine 5'-phosphate oxidase ALE3EI_RS11700 PF12706 Beta-lactamase superfamily domain ALE3EI_RS11710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALE3EI_RS11710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALE3EI_RS11715 PF00156 Phosphoribosyl transferase domain ALE3EI_RS11720 PF00575 S1 RNA binding domain ALE3EI_RS11725 PF06736 Protein of unknown function (DUF1211) ALE3EI_RS11730 PF02224 Cytidylate kinase ALE3EI_RS11740 PF05362 Lon protease (S16) C-terminal proteolytic domain ALE3EI_RS11740 PF00004 ATPase family associated with various cellular activities (AAA) ALE3EI_RS11740 PF02190 ATP-dependent protease La (LON) substrate-binding domain ALE3EI_RS11745 PF08281 Sigma-70, region 4 ALE3EI_RS11745 PF04542 Sigma-70 region 2 ALE3EI_RS11770 PF11700 Vacuole effluxer Atg22 like ALE3EI_RS11785 PF01641 SelR domain ALE3EI_RS11790 PF01641 SelR domain ALE3EI_RS11795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALE3EI_RS11795 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALE3EI_RS11800 PF01220 Dehydroquinase class II ALE3EI_RS11825 PF02899 Phage integrase, N-terminal SAM-like domain ALE3EI_RS11825 PF00589 Phage integrase family ALE3EI_RS11830 PF00248 Aldo/keto reductase family ALE3EI_RS11835 PF12072 Domain of unknown function (DUF3552) ALE3EI_RS11835 PF00013 KH domain ALE3EI_RS11835 PF01966 HD domain ALE3EI_RS11855 PF01551 Peptidase family M23 ALE3EI_RS11855 PF08460 Bacterial SH3 domain ALE3EI_RS11865 PF00266 Aminotransferase class-V ALE3EI_RS11895 PF00202 Aminotransferase class-III ALE3EI_RS11900 PF01938 TRAM domain ALE3EI_RS11900 PF05958 tRNA (Uracil-5-)-methyltransferase ALE3EI_RS11915 PF02926 THUMP domain ALE3EI_RS11915 PF10672 S-adenosylmethionine-dependent methyltransferase ALE3EI_RS11915 PF01170 Putative RNA methylase family UPF0020 ALE3EI_RS11930 PF03006 Haemolysin-III related ALE3EI_RS11975 PF05343 M42 glutamyl aminopeptidase ALE3EI_RS11990 PF03062 MBOAT, membrane-bound O-acyltransferase family ALE3EI_RS12000 PF01235 Sodium:alanine symporter family ALE3EI_RS12010 PF01259 SAICAR synthetase ALE3EI_RS12015 PF02562 PhoH-like protein ALE3EI_RS12040 PF02768 DNA polymerase III beta subunit, C-terminal domain ALE3EI_RS12040 PF02767 DNA polymerase III beta subunit, central domain ALE3EI_RS12040 PF00712 DNA polymerase III beta subunit, N-terminal domain ALE3EI_RS12045 PF12697 Alpha/beta hydrolase family ALE3EI_RS12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS12050 PF09308 LuxQ, periplasmic ALE3EI_RS12050 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS12050 PF00072 Response regulator receiver domain ALE3EI_RS12055 PF03109 ABC1 family ALE3EI_RS12070 PF12631 MnmE helical domain ALE3EI_RS12070 PF10396 GTP-binding protein TrmE N-terminus ALE3EI_RS12070 PF01926 50S ribosome-binding GTPase ALE3EI_RS12090 PF02719 Polysaccharide biosynthesis protein ALE3EI_RS12095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALE3EI_RS12105 PF02397 Bacterial sugar transferase ALE3EI_RS12110 PF00534 Glycosyl transferases group 1 ALE3EI_RS12110 PF13477 Glycosyl transferase 4-like ALE3EI_RS12115 PF13579 Glycosyl transferase 4-like domain ALE3EI_RS12115 PF00534 Glycosyl transferases group 1 ALE3EI_RS12130 PF01370 NAD dependent epimerase/dehydratase family ALE3EI_RS12140 PF13537 Glutamine amidotransferase domain ALE3EI_RS12140 PF00733 Asparagine synthase ALE3EI_RS12145 PF00132 Bacterial transferase hexapeptide (six repeats) ALE3EI_RS12145 PF12464 Maltose acetyltransferase ALE3EI_RS12150 PF14667 Polysaccharide biosynthesis C-terminal domain ALE3EI_RS12150 PF01943 Polysaccharide biosynthesis protein ALE3EI_RS12160 PF00535 Glycosyl transferase family 2 ALE3EI_RS12175 PF01943 Polysaccharide biosynthesis protein ALE3EI_RS12180 PF00009 Elongation factor Tu GTP binding domain ALE3EI_RS12185 PF01507 Phosphoadenosine phosphosulfate reductase family ALE3EI_RS12200 PF00459 Inositol monophosphatase family ALE3EI_RS12205 PF00210 Ferritin-like domain ALE3EI_RS12240 PF00578 AhpC/TSA family ALE3EI_RS12250 PF01694 Rhomboid family ALE3EI_RS12260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALE3EI_RS12260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALE3EI_RS12260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALE3EI_RS12260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALE3EI_RS12280 PF00005 ABC transporter ALE3EI_RS12280 PF17760 UvrA interaction domain ALE3EI_RS12280 PF17755 UvrA DNA-binding domain ALE3EI_RS12285 PF03641 Possible lysine decarboxylase ALE3EI_RS12300 PF02780 Transketolase, C-terminal domain ALE3EI_RS12300 PF02779 Transketolase, pyrimidine binding domain ALE3EI_RS12310 PF13537 Glutamine amidotransferase domain ALE3EI_RS12310 PF00733 Asparagine synthase ALE3EI_RS12320 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS12320 PF00072 Response regulator receiver domain ALE3EI_RS12325 PF00378 Enoyl-CoA hydratase/isomerase ALE3EI_RS12345 PF13509 S1 domain ALE3EI_RS12345 PF17783 CvfB-like winged helix domain ALE3EI_RS12355 PF16582 Middle domain of thiamine pyrophosphate ALE3EI_RS12355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALE3EI_RS12355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALE3EI_RS12360 PF00425 chorismate binding enzyme ALE3EI_RS12365 PF03061 Thioesterase superfamily ALE3EI_RS12380 PF01758 Sodium Bile acid symporter family ALE3EI_RS12435 PF00144 Beta-lactamase ALE3EI_RS12440 PF00012 Hsp70 protein ALE3EI_RS12445 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALE3EI_RS12445 PF02811 PHP domain ALE3EI_RS12445 PF14579 Helix-hairpin-helix motif ALE3EI_RS12445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALE3EI_RS12450 PF00817 impB/mucB/samB family ALE3EI_RS12450 PF11799 impB/mucB/samB family C-terminal domain ALE3EI_RS12450 PF11798 IMS family HHH motif ALE3EI_RS12455 PF02586 SOS response associated peptidase (SRAP) ALE3EI_RS12460 PF03315 Serine dehydratase beta chain ALE3EI_RS12460 PF03313 Serine dehydratase alpha chain ALE3EI_RS12470 PF02548 Ketopantoate hydroxymethyltransferase ALE3EI_RS12475 PF00849 RNA pseudouridylate synthase ALE3EI_RS12475 PF01479 S4 domain ALE3EI_RS12480 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS12480 PF00072 Response regulator receiver domain ALE3EI_RS12485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS12485 PF07730 Histidine kinase ALE3EI_RS12505 PF02682 Carboxyltransferase domain, subdomain C and D ALE3EI_RS12510 PF03746 LamB/YcsF family ALE3EI_RS12515 PF01566 Natural resistance-associated macrophage protein ALE3EI_RS12520 PF05193 Peptidase M16 inactive domain ALE3EI_RS12520 PF00675 Insulinase (Peptidase family M16) ALE3EI_RS12525 PF01078 Magnesium chelatase, subunit ChlI ALE3EI_RS12525 PF13335 Magnesium chelatase, subunit ChlI C-terminal ALE3EI_RS12530 PF00072 Response regulator receiver domain ALE3EI_RS12530 PF00196 Bacterial regulatory proteins, luxR family ALE3EI_RS12535 PF07730 Histidine kinase ALE3EI_RS12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS12550 PF00342 Phosphoglucose isomerase ALE3EI_RS12560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALE3EI_RS12560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALE3EI_RS12565 PF00365 Phosphofructokinase ALE3EI_RS12575 PF02683 Cytochrome C biogenesis protein transmembrane region ALE3EI_RS12575 PF11412 Disulphide bond corrector protein DsbC ALE3EI_RS12580 PF11734 TilS substrate C-terminal domain ALE3EI_RS12580 PF01171 PP-loop family ALE3EI_RS12585 PF00425 chorismate binding enzyme ALE3EI_RS12585 PF04715 Anthranilate synthase component I, N terminal region ALE3EI_RS12590 PF03358 NADPH-dependent FMN reductase ALE3EI_RS12600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALE3EI_RS12600 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALE3EI_RS12610 PF01037 Lrp/AsnC ligand binding domain ALE3EI_RS12615 PF01053 Cys/Met metabolism PLP-dependent enzyme ALE3EI_RS12635 PF03553 Na+/H+ antiporter family ALE3EI_RS12640 PF10417 C-terminal domain of 1-Cys peroxiredoxin ALE3EI_RS12640 PF00578 AhpC/TSA family ALE3EI_RS12645 PF08534 Redoxin ALE3EI_RS12660 PF17854 FtsK alpha domain ALE3EI_RS12660 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ALE3EI_RS12660 PF01580 FtsK/SpoIIIE family ALE3EI_RS12660 PF09397 Ftsk gamma domain ALE3EI_RS12675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ALE3EI_RS12675 PF00925 GTP cyclohydrolase II ALE3EI_RS12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS12690 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS12690 PF07494 Two component regulator propeller ALE3EI_RS12690 PF12833 Helix-turn-helix domain ALE3EI_RS12690 PF07495 Y_Y_Y domain ALE3EI_RS12690 PF00072 Response regulator receiver domain ALE3EI_RS12695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALE3EI_RS12700 PF00881 Nitroreductase family ALE3EI_RS12720 PF00582 Universal stress protein family ALE3EI_RS12730 PF00085 Thioredoxin ALE3EI_RS12750 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS12750 PF18698 Histidine kinase sensor domain ALE3EI_RS12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS12750 PF00672 HAMP domain ALE3EI_RS12755 PF00486 Transcriptional regulatory protein, C terminal ALE3EI_RS12755 PF00072 Response regulator receiver domain ALE3EI_RS12760 PF00582 Universal stress protein family ALE3EI_RS12780 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS12780 PF10996 Beta-Casp domain ALE3EI_RS12780 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALE3EI_RS12805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALE3EI_RS12805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALE3EI_RS12810 PF00582 Universal stress protein family ALE3EI_RS12820 PF02469 Fasciclin domain ALE3EI_RS12825 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALE3EI_RS12825 PF18764 Nitrous oxide reductase propeller repeat ALE3EI_RS12825 PF18793 Nitrous oxide reductase propeller repeat 2 ALE3EI_RS12850 PF00005 ABC transporter ALE3EI_RS12880 PF00873 AcrB/AcrD/AcrF family ALE3EI_RS12900 PF00403 Heavy-metal-associated domain ALE3EI_RS12910 PF00873 AcrB/AcrD/AcrF family ALE3EI_RS12925 PF00394 Multicopper oxidase ALE3EI_RS12925 PF07731 Multicopper oxidase ALE3EI_RS12925 PF07732 Multicopper oxidase ALE3EI_RS12940 PF03773 Predicted permease ALE3EI_RS12965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALE3EI_RS13030 PF00072 Response regulator receiver domain ALE3EI_RS13030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS13030 PF13188 PAS domain ALE3EI_RS13030 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS13030 PF08448 PAS fold ALE3EI_RS13035 PF00072 Response regulator receiver domain ALE3EI_RS13035 PF00158 Sigma-54 interaction domain ALE3EI_RS13035 PF02954 Bacterial regulatory protein, Fis family ALE3EI_RS13040 PF04542 Sigma-70 region 2 ALE3EI_RS13040 PF08281 Sigma-70, region 4 ALE3EI_RS13055 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALE3EI_RS13055 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALE3EI_RS13060 PF03449 Transcription elongation factor, N-terminal ALE3EI_RS13060 PF01272 Transcription elongation factor, GreA/GreB, C-term ALE3EI_RS13080 PF00753 Metallo-beta-lactamase superfamily ALE3EI_RS13080 PF00581 Rhodanese-like domain ALE3EI_RS13100 PF02585 GlcNAc-PI de-N-acetylase ALE3EI_RS13105 PF01053 Cys/Met metabolism PLP-dependent enzyme ALE3EI_RS13110 PF01979 Amidohydrolase family ALE3EI_RS13115 PF00491 Arginase family ALE3EI_RS13120 PF02971 Formiminotransferase domain ALE3EI_RS13120 PF07837 Formiminotransferase domain, N-terminal subdomain ALE3EI_RS13140 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS13140 PF00593 TonB dependent receptor ALE3EI_RS13155 PF00326 Prolyl oligopeptidase family ALE3EI_RS13155 PF07676 WD40-like Beta Propeller Repeat ALE3EI_RS13165 PF12848 ABC transporter ALE3EI_RS13165 PF00005 ABC transporter ALE3EI_RS13175 PF01039 Carboxyl transferase domain ALE3EI_RS13195 PF00593 TonB dependent receptor ALE3EI_RS13195 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS13200 PF13193 AMP-binding enzyme C-terminal domain ALE3EI_RS13200 PF00501 AMP-binding enzyme ALE3EI_RS13210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALE3EI_RS13210 PF13378 Enolase C-terminal domain-like ALE3EI_RS13220 PF01040 UbiA prenyltransferase family ALE3EI_RS13245 PF00534 Glycosyl transferases group 1 ALE3EI_RS13245 PF00535 Glycosyl transferase family 2 ALE3EI_RS13265 PF01300 Telomere recombination ALE3EI_RS13275 PF13361 UvrD-like helicase C-terminal domain ALE3EI_RS13275 PF00580 UvrD/REP helicase N-terminal domain ALE3EI_RS13280 PF07687 Peptidase dimerisation domain ALE3EI_RS13280 PF01546 Peptidase family M20/M25/M40 ALE3EI_RS13285 PF01645 Conserved region in glutamate synthase ALE3EI_RS13290 PF00072 Response regulator receiver domain ALE3EI_RS13290 PF04397 LytTr DNA-binding domain ALE3EI_RS13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS13295 PF06580 Histidine kinase ALE3EI_RS13295 PF07694 5TMR of 5TMR-LYT ALE3EI_RS13315 PF11838 ERAP1-like C-terminal domain ALE3EI_RS13315 PF01433 Peptidase family M1 domain ALE3EI_RS13320 PF17191 RecG wedge domain ALE3EI_RS13320 PF00270 DEAD/DEAH box helicase ALE3EI_RS13320 PF00271 Helicase conserved C-terminal domain ALE3EI_RS13335 PF03484 tRNA synthetase B5 domain ALE3EI_RS13335 PF03147 Ferredoxin-fold anticodon binding domain ALE3EI_RS13335 PF01588 Putative tRNA binding domain ALE3EI_RS13335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ALE3EI_RS13335 PF03483 B3/4 domain ALE3EI_RS13355 PF12848 ABC transporter ALE3EI_RS13355 PF00005 ABC transporter ALE3EI_RS13365 PF00923 Transaldolase/Fructose-6-phosphate aldolase ALE3EI_RS13370 PF00106 short chain dehydrogenase ALE3EI_RS13395 PF00313 'Cold-shock' DNA-binding domain ALE3EI_RS13405 PF03150 Di-haem cytochrome c peroxidase ALE3EI_RS13405 PF00034 Cytochrome c ALE3EI_RS13420 PF00464 Serine hydroxymethyltransferase ALE3EI_RS13440 PF10431 C-terminal, D2-small domain, of ClpB protein ALE3EI_RS13440 PF02861 Clp amino terminal domain, pathogenicity island component ALE3EI_RS13440 PF00004 ATPase family associated with various cellular activities (AAA) ALE3EI_RS13440 PF17871 AAA lid domain ALE3EI_RS13440 PF07724 AAA domain (Cdc48 subfamily) ALE3EI_RS13445 PF08361 MAATS-type transcriptional repressor, C-terminal region ALE3EI_RS13445 PF00440 Bacterial regulatory proteins, tetR family ALE3EI_RS13480 PF01668 SmpB protein ALE3EI_RS13485 PF00593 TonB dependent receptor ALE3EI_RS13485 PF07715 TonB-dependent Receptor Plug Domain ALE3EI_RS13505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ALE3EI_RS13505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ALE3EI_RS13510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALE3EI_RS13510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALE3EI_RS13520 PF01168 Alanine racemase, N-terminal domain ALE3EI_RS13525 PF14579 Helix-hairpin-helix motif ALE3EI_RS13525 PF00929 Exonuclease ALE3EI_RS13525 PF01336 OB-fold nucleic acid binding domain ALE3EI_RS13525 PF02811 PHP domain ALE3EI_RS13525 PF11490 DNA polymerase III polC-type N-terminus II ALE3EI_RS13525 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALE3EI_RS13525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALE3EI_RS13530 PF00520 Ion transport protein ALE3EI_RS13530 PF00027 Cyclic nucleotide-binding domain ALE3EI_RS13540 PF00072 Response regulator receiver domain ALE3EI_RS13540 PF00486 Transcriptional regulatory protein, C terminal ALE3EI_RS13545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALE3EI_RS13545 PF00512 His Kinase A (phospho-acceptor) domain ALE3EI_RS13550 PF01121 Dephospho-CoA kinase ALE3EI_RS13560 PF00535 Glycosyl transferase family 2 ALE3EI_RS13580 PF02463 RecF/RecN/SMC N terminal domain ALE3EI_RS13590 PF02441 Flavoprotein ALE3EI_RS13590 PF04127 DNA / pantothenate metabolism flavoprotein ALE3EI_RS13605 PF00701 Dihydrodipicolinate synthetase family ALE3EI_RS13615 PF12826 Helix-hairpin-helix motif ALE3EI_RS13615 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ALE3EI_RS13615 PF00533 BRCA1 C Terminus (BRCT) domain ALE3EI_RS13615 PF03120 NAD-dependent DNA ligase OB-fold domain ALE3EI_RS13615 PF01653 NAD-dependent DNA ligase adenylation domain ALE3EI_RS13620 PF03641 Possible lysine decarboxylase ALE3EI_RS13625 PF05175 Methyltransferase small domain ALE3EI_RS13625 PF17827 PrmC N-terminal domain ALE3EI_RS13635 PF01872 RibD C-terminal domain ALE3EI_RS13635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALE3EI_RS13645 PF01205 Uncharacterized protein family UPF0029 ALE3EI_RS13645 PF09186 Domain of unknown function (DUF1949)