locus-tag class description Ami103574_RS00005 PF00324 Amino acid permease Ami103574_RS00015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ami103574_RS00015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ami103574_RS00020 PF00158 Sigma-54 interaction domain Ami103574_RS00020 PF00072 Response regulator receiver domain Ami103574_RS00020 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS00035 PF07690 Major Facilitator Superfamily Ami103574_RS00115 PF00772 DnaB-like helicase N terminal domain Ami103574_RS00115 PF03796 DnaB-like helicase C terminal domain Ami103574_RS00140 PF14659 Phage integrase, N-terminal SAM-like domain Ami103574_RS00140 PF00589 Phage integrase family Ami103574_RS00145 PF00005 ABC transporter Ami103574_RS00145 PF09383 NIL domain Ami103574_RS00160 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS00165 PF00005 ABC transporter Ami103574_RS00175 PF00491 Arginase family Ami103574_RS00180 PF00324 Amino acid permease Ami103574_RS00185 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS00185 PF13426 PAS domain Ami103574_RS00185 PF00158 Sigma-54 interaction domain Ami103574_RS00245 PF00395 S-layer homology domain Ami103574_RS00250 PF13187 4Fe-4S dicluster domain Ami103574_RS00250 PF04060 Putative Fe-S cluster Ami103574_RS00250 PF00037 4Fe-4S binding domain Ami103574_RS00255 PF02508 Rnf-Nqr subunit, membrane protein Ami103574_RS00260 PF02508 Rnf-Nqr subunit, membrane protein Ami103574_RS00265 PF04205 FMN-binding domain Ami103574_RS00270 PF03116 NQR2, RnfD, RnfE family Ami103574_RS00275 PF10531 SLBB domain Ami103574_RS00275 PF13375 RnfC Barrel sandwich hybrid domain Ami103574_RS00275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami103574_RS00275 PF13237 4Fe-4S dicluster domain Ami103574_RS00280 PF03466 LysR substrate binding domain Ami103574_RS00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS00285 PF00403 Heavy-metal-associated domain Ami103574_RS00290 PF01022 Bacterial regulatory protein, arsR family Ami103574_RS00295 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami103574_RS00295 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami103574_RS00300 PF04607 Region found in RelA / SpoT proteins Ami103574_RS00315 PF13533 Biotin-lipoyl like Ami103574_RS00335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami103574_RS00335 PF02403 Seryl-tRNA synthetase N-terminal domain Ami103574_RS00345 PF03699 Uncharacterised protein family (UPF0182) Ami103574_RS00385 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS00385 PF00989 PAS fold Ami103574_RS00385 PF00158 Sigma-54 interaction domain Ami103574_RS00390 PF00871 Acetokinase family Ami103574_RS00395 PF01515 Phosphate acetyl/butaryl transferase Ami103574_RS00400 PF05853 beta-keto acid cleavage enzyme Ami103574_RS00405 PF01144 Coenzyme A transferase Ami103574_RS00410 PF01144 Coenzyme A transferase Ami103574_RS00420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami103574_RS00420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami103574_RS00425 PF01966 HD domain Ami103574_RS00430 PF00589 Phage integrase family Ami103574_RS00430 PF14659 Phage integrase, N-terminal SAM-like domain Ami103574_RS00435 PF07690 Major Facilitator Superfamily Ami103574_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS00445 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami103574_RS00450 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami103574_RS00455 PF00005 ABC transporter Ami103574_RS00465 PF00491 Arginase family Ami103574_RS00470 PF13411 MerR HTH family regulatory protein Ami103574_RS00470 PF06445 GyrI-like small molecule binding domain Ami103574_RS00475 PF04474 Protein of unknown function (DUF554) Ami103574_RS00480 PF00266 Aminotransferase class-V Ami103574_RS00490 PF03577 Peptidase family C69 Ami103574_RS00505 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS00510 PF16916 Dimerisation domain of Zinc Transporter Ami103574_RS00510 PF01545 Cation efflux family Ami103574_RS00515 PF00301 Rubredoxin Ami103574_RS00520 PF00258 Flavodoxin Ami103574_RS00520 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS00525 PF01261 Xylose isomerase-like TIM barrel Ami103574_RS00540 PF00672 HAMP domain Ami103574_RS00540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS00540 PF02203 Tar ligand binding domain homologue Ami103574_RS00545 PF01541 GIY-YIG catalytic domain Ami103574_RS00550 PF01584 CheW-like domain Ami103574_RS00550 PF00072 Response regulator receiver domain Ami103574_RS00555 PF01168 Alanine racemase, N-terminal domain Ami103574_RS00565 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Ami103574_RS00565 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Ami103574_RS00565 PF02310 B12 binding domain Ami103574_RS00570 PF16552 D-ornithine 4,5-aminomutase alpha-subunit Ami103574_RS00575 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS00590 PF13426 PAS domain Ami103574_RS00590 PF00158 Sigma-54 interaction domain Ami103574_RS00590 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS00595 PF01022 Bacterial regulatory protein, arsR family Ami103574_RS00615 PF00563 EAL domain Ami103574_RS00615 PF12792 CSS motif domain associated with EAL Ami103574_RS00625 PF13520 Amino acid permease Ami103574_RS00630 PF02590 Predicted SPOUT methyltransferase Ami103574_RS00655 PF00075 RNase H Ami103574_RS00660 PF00266 Aminotransferase class-V Ami103574_RS00665 PF00893 Small Multidrug Resistance protein Ami103574_RS00690 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS00700 PF12704 MacB-like periplasmic core domain Ami103574_RS00700 PF02687 FtsX-like permease family Ami103574_RS00705 PF00005 ABC transporter Ami103574_RS00710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Ami103574_RS00720 PF17762 HTH domain found in ParB protein Ami103574_RS00720 PF02195 ParB-like nuclease domain Ami103574_RS00725 PF13614 AAA domain Ami103574_RS00730 PF17762 HTH domain found in ParB protein Ami103574_RS00730 PF02195 ParB-like nuclease domain Ami103574_RS00735 PF02527 rRNA small subunit methyltransferase G Ami103574_RS00740 PF13932 GidA associated domain Ami103574_RS00740 PF01134 Glucose inhibited division protein A Ami103574_RS00745 PF01926 50S ribosome-binding GTPase Ami103574_RS00745 PF10396 GTP-binding protein TrmE N-terminus Ami103574_RS00745 PF12631 MnmE helical domain Ami103574_RS00750 PF14804 Jag N-terminus Ami103574_RS00750 PF01424 R3H domain Ami103574_RS00755 PF02096 60Kd inner membrane protein Ami103574_RS00755 PF14849 YidC periplasmic domain Ami103574_RS00760 PF01809 Putative membrane protein insertion efficiency factor Ami103574_RS00765 PF00825 Ribonuclease P Ami103574_RS00770 PF00468 Ribosomal protein L34 Ami103574_RS00775 PF11638 DnaA N-terminal domain Ami103574_RS00775 PF08299 Bacterial dnaA protein helix-turn-helix Ami103574_RS00775 PF00308 Bacterial dnaA protein Ami103574_RS00780 PF02768 DNA polymerase III beta subunit, C-terminal domain Ami103574_RS00780 PF02767 DNA polymerase III beta subunit, central domain Ami103574_RS00780 PF00712 DNA polymerase III beta subunit, N-terminal domain Ami103574_RS00785 PF02463 RecF/RecN/SMC N terminal domain Ami103574_RS00790 PF00204 DNA gyrase B Ami103574_RS00790 PF00986 DNA gyrase B subunit, carboxyl terminus Ami103574_RS00790 PF01751 Toprim domain Ami103574_RS00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS00795 PF00521 DNA gyrase/topoisomerase IV, subunit A Ami103574_RS00795 PF03989 DNA gyrase C-terminal domain, beta-propeller Ami103574_RS00800 PF13581 Histidine kinase-like ATPase domain Ami103574_RS00805 PF04539 Sigma-70 region 3 Ami103574_RS00805 PF04545 Sigma-70, region 4 Ami103574_RS00805 PF04542 Sigma-70 region 2 Ami103574_RS00810 PF00579 tRNA synthetases class I (W and Y) Ami103574_RS00815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami103574_RS00815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami103574_RS00825 PF01569 PAP2 superfamily Ami103574_RS00830 PF00293 NUDIX domain Ami103574_RS00835 PF00672 HAMP domain Ami103574_RS00835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS00835 PF02203 Tar ligand binding domain homologue Ami103574_RS00840 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Ami103574_RS00840 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Ami103574_RS00845 PF00108 Thiolase, N-terminal domain Ami103574_RS00845 PF02803 Thiolase, C-terminal domain Ami103574_RS00850 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS00865 PF05853 beta-keto acid cleavage enzyme Ami103574_RS00880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami103574_RS00880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami103574_RS00890 PF01969 Protein of unknown function DUF111 Ami103574_RS00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS00895 PF03466 LysR substrate binding domain Ami103574_RS00900 PF07690 Major Facilitator Superfamily Ami103574_RS00910 PF02540 NAD synthase Ami103574_RS00915 PF01022 Bacterial regulatory protein, arsR family Ami103574_RS00925 PF00403 Heavy-metal-associated domain Ami103574_RS00930 PF02669 K+-transporting ATPase, c chain Ami103574_RS00940 PF03814 Potassium-transporting ATPase A subunit Ami103574_RS00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS00950 PF13493 Domain of unknown function (DUF4118) Ami103574_RS00950 PF02702 Osmosensitive K+ channel His kinase sensor domain Ami103574_RS00950 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS00955 PF00072 Response regulator receiver domain Ami103574_RS00955 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS00965 PF00266 Aminotransferase class-V Ami103574_RS00970 PF04055 Radical SAM superfamily Ami103574_RS00970 PF02579 Dinitrogenase iron-molybdenum cofactor Ami103574_RS00975 PF02579 Dinitrogenase iron-molybdenum cofactor Ami103574_RS00975 PF04055 Radical SAM superfamily Ami103574_RS00980 PF09084 NMT1/THI5 like Ami103574_RS00985 PF00005 ABC transporter Ami103574_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS00995 PF00148 Nitrogenase component 1 type Oxidoreductase Ami103574_RS01000 PF00148 Nitrogenase component 1 type Oxidoreductase Ami103574_RS01010 PF04072 Leucine carboxyl methyltransferase Ami103574_RS01015 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami103574_RS01020 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS01025 PF04397 LytTr DNA-binding domain Ami103574_RS01025 PF00072 Response regulator receiver domain Ami103574_RS01060 PF00255 Glutathione peroxidase Ami103574_RS01065 PF01047 MarR family Ami103574_RS01080 PF00596 Class II Aldolase and Adducin N-terminal domain Ami103574_RS01085 PF00294 pfkB family carbohydrate kinase Ami103574_RS01090 PF01250 Ribosomal protein S6 Ami103574_RS01095 PF00436 Single-strand binding protein family Ami103574_RS01100 PF01084 Ribosomal protein S18 Ami103574_RS01105 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Ami103574_RS01105 PF07581 The GLUG motif Ami103574_RS01115 PF02541 Ppx/GppA phosphatase family Ami103574_RS01120 PF01966 HD domain Ami103574_RS01125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS01125 PF02203 Tar ligand binding domain homologue Ami103574_RS01125 PF00672 HAMP domain Ami103574_RS01130 PF14659 Phage integrase, N-terminal SAM-like domain Ami103574_RS01130 PF00589 Phage integrase family Ami103574_RS01140 PF01368 DHH family Ami103574_RS01140 PF02272 DHHA1 domain Ami103574_RS01145 PF01281 Ribosomal protein L9, N-terminal domain Ami103574_RS01145 PF03948 Ribosomal protein L9, C-terminal domain Ami103574_RS01150 PF03796 DnaB-like helicase C terminal domain Ami103574_RS01150 PF00772 DnaB-like helicase N terminal domain Ami103574_RS01160 PF01476 LysM domain Ami103574_RS01160 PF08525 Opacity-associated protein A N-terminal motif Ami103574_RS01160 PF01551 Peptidase family M23 Ami103574_RS01165 PF00485 Phosphoribulokinase / Uridine kinase family Ami103574_RS01170 PF01613 Flavin reductase like domain Ami103574_RS01170 PF00301 Rubredoxin Ami103574_RS01175 PF02915 Rubrerythrin Ami103574_RS01195 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Ami103574_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS01210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ami103574_RS01215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami103574_RS01215 PF00005 ABC transporter Ami103574_RS01220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami103574_RS01220 PF00005 ABC transporter Ami103574_RS01225 PF01554 MatE Ami103574_RS01235 PF00085 Thioredoxin Ami103574_RS01245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ami103574_RS01245 PF13187 4Fe-4S dicluster domain Ami103574_RS01245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Ami103574_RS01260 PF00899 ThiF family Ami103574_RS01265 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami103574_RS01270 PF12833 Helix-turn-helix domain Ami103574_RS01270 PF00072 Response regulator receiver domain Ami103574_RS01275 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS01280 PF09084 NMT1/THI5 like Ami103574_RS01285 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS01290 PF00005 ABC transporter Ami103574_RS01295 PF02901 Pyruvate formate lyase-like Ami103574_RS01295 PF01228 Glycine radical Ami103574_RS01300 PF04055 Radical SAM superfamily Ami103574_RS01300 PF13187 4Fe-4S dicluster domain Ami103574_RS01305 PF00082 Subtilase family Ami103574_RS01310 PF00072 Response regulator receiver domain Ami103574_RS01310 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS01315 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS01315 PF00672 HAMP domain Ami103574_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS01315 PF13426 PAS domain Ami103574_RS01330 PF04977 Septum formation initiator Ami103574_RS01335 PF13331 Domain of unknown function (DUF4093) Ami103574_RS01335 PF01751 Toprim domain Ami103574_RS01340 PF00398 Ribosomal RNA adenine dimethylase Ami103574_RS01350 PF13302 Acetyltransferase (GNAT) domain Ami103574_RS01370 PF04073 Aminoacyl-tRNA editing domain Ami103574_RS01375 PF01042 Endoribonuclease L-PSP Ami103574_RS01380 PF01202 Shikimate kinase Ami103574_RS01390 PF01487 Type I 3-dehydroquinase Ami103574_RS01395 PF08501 Shikimate dehydrogenase substrate binding domain Ami103574_RS01400 PF00800 Prephenate dehydratase Ami103574_RS01400 PF01817 Chorismate mutase type II Ami103574_RS01405 PF01264 Chorismate synthase Ami103574_RS01410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ami103574_RS01415 PF01761 3-dehydroquinate synthase Ami103574_RS01420 PF02153 Prephenate dehydrogenase Ami103574_RS01425 PF00793 DAHP synthetase I family Ami103574_RS01425 PF18152 DAHP synthase ferredoxin-like domain Ami103574_RS01430 PF08447 PAS fold Ami103574_RS01430 PF00563 EAL domain Ami103574_RS01430 PF05231 MASE1 Ami103574_RS01430 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS01430 PF08448 PAS fold Ami103574_RS01430 PF13426 PAS domain Ami103574_RS01440 PF00330 Aconitase family (aconitate hydratase) Ami103574_RS01445 PF00694 Aconitase C-terminal domain Ami103574_RS01450 PF00330 Aconitase family (aconitate hydratase) Ami103574_RS01455 PF00694 Aconitase C-terminal domain Ami103574_RS01460 PF00180 Isocitrate/isopropylmalate dehydrogenase Ami103574_RS01465 PF00682 HMGL-like Ami103574_RS01465 PF08502 LeuA allosteric (dimerisation) domain Ami103574_RS01470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami103574_RS01470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ami103574_RS01470 PF00205 Thiamine pyrophosphate enzyme, central domain Ami103574_RS01475 PF10369 Small subunit of acetolactate synthase Ami103574_RS01480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Ami103574_RS01480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Ami103574_RS01485 PF00920 Dehydratase family Ami103574_RS01520 PF13291 ACT domain Ami103574_RS01520 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS01525 PF01209 ubiE/COQ5 methyltransferase family Ami103574_RS01530 PF00664 ABC transporter transmembrane region Ami103574_RS01530 PF00005 ABC transporter Ami103574_RS01535 PF00664 ABC transporter transmembrane region Ami103574_RS01535 PF00005 ABC transporter Ami103574_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS01550 PF00005 ABC transporter Ami103574_RS01550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami103574_RS01555 PF00005 ABC transporter Ami103574_RS01555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami103574_RS01560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ami103574_RS01565 PF00221 Aromatic amino acid lyase Ami103574_RS01570 PF01175 Urocanase Rossmann-like domain Ami103574_RS01570 PF17391 Urocanase N-terminal domain Ami103574_RS01570 PF17392 Urocanase C-terminal domain Ami103574_RS01575 PF01979 Amidohydrolase family Ami103574_RS01585 PF02971 Formiminotransferase domain Ami103574_RS01585 PF07837 Formiminotransferase domain, N-terminal subdomain Ami103574_RS01595 PF01168 Alanine racemase, N-terminal domain Ami103574_RS01595 PF00842 Alanine racemase, C-terminal domain Ami103574_RS01600 PF07969 Amidohydrolase family Ami103574_RS01610 PF05525 Branched-chain amino acid transport protein Ami103574_RS01615 PF00860 Permease family Ami103574_RS01640 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Ami103574_RS01645 PF07690 Major Facilitator Superfamily Ami103574_RS01650 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal Ami103574_RS01650 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Ami103574_RS01650 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Ami103574_RS01655 PF00206 Lyase Ami103574_RS01655 PF10397 Adenylosuccinate lyase C-terminus Ami103574_RS01660 PF00709 Adenylosuccinate synthetase Ami103574_RS01670 PF04542 Sigma-70 region 2 Ami103574_RS01670 PF08281 Sigma-70, region 4 Ami103574_RS01685 PF00005 ABC transporter Ami103574_RS01685 PF02687 FtsX-like permease family Ami103574_RS01685 PF12704 MacB-like periplasmic core domain Ami103574_RS01690 PF12704 MacB-like periplasmic core domain Ami103574_RS01690 PF02687 FtsX-like permease family Ami103574_RS01690 PF00005 ABC transporter Ami103574_RS01695 PF00963 Cohesin domain Ami103574_RS01695 PF00395 S-layer homology domain Ami103574_RS01700 PF01381 Helix-turn-helix Ami103574_RS01750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS01750 PF00672 HAMP domain Ami103574_RS01750 PF02203 Tar ligand binding domain homologue Ami103574_RS01760 PF02525 Flavodoxin-like fold Ami103574_RS01770 PF00155 Aminotransferase class I and II Ami103574_RS01795 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS01795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ami103574_RS01800 PF01979 Amidohydrolase family Ami103574_RS01805 PF14437 MafB19-like deaminase Ami103574_RS01815 PF00288 GHMP kinases N terminal domain Ami103574_RS01815 PF08544 GHMP kinases C terminal Ami103574_RS01820 PF07729 FCD domain Ami103574_RS01820 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS01825 PF04509 CheC-like family Ami103574_RS01825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Ami103574_RS01840 PF09551 Stage II sporulation protein R (spore_II_R) Ami103574_RS01845 PF13180 PDZ domain Ami103574_RS01850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ami103574_RS01850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ami103574_RS01850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ami103574_RS01850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ami103574_RS01855 PF01430 Hsp33 protein Ami103574_RS01860 PF07478 D-ala D-ala ligase C-terminus Ami103574_RS01860 PF01820 D-ala D-ala ligase N-terminus Ami103574_RS01870 PF01471 Putative peptidoglycan binding domain Ami103574_RS01870 PF17820 PDZ domain Ami103574_RS01870 PF03572 Peptidase family S41 Ami103574_RS01875 PF08903 Domain of unknown function (DUF1846) Ami103574_RS01885 PF07155 ECF-type riboflavin transporter, S component Ami103574_RS01890 PF12558 ATP-binding cassette cobalt transporter Ami103574_RS01890 PF00005 ABC transporter Ami103574_RS01900 PF00128 Alpha amylase, catalytic domain Ami103574_RS01900 PF00395 S-layer homology domain Ami103574_RS01900 PF02903 Alpha amylase, N-terminal ig-like domain Ami103574_RS01915 PF00395 S-layer homology domain Ami103574_RS01920 PF00395 S-layer homology domain Ami103574_RS01925 PF00395 S-layer homology domain Ami103574_RS01925 PF00963 Cohesin domain Ami103574_RS01930 PF01370 NAD dependent epimerase/dehydratase family Ami103574_RS01935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ami103574_RS01940 PF02542 YgbB family Ami103574_RS01940 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ami103574_RS01945 PF03023 Lipid II flippase MurJ Ami103574_RS01950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ami103574_RS01955 PF16363 GDP-mannose 4,6 dehydratase Ami103574_RS01960 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase Ami103574_RS01970 PF02397 Bacterial sugar transferase Ami103574_RS01975 PF17836 PglD N-terminal domain Ami103574_RS01975 PF00132 Bacterial transferase hexapeptide (six repeats) Ami103574_RS01980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Ami103574_RS01985 PF02086 D12 class N6 adenine-specific DNA methyltransferase Ami103574_RS02005 PF00534 Glycosyl transferases group 1 Ami103574_RS02005 PF13439 Glycosyltransferase Family 4 Ami103574_RS02015 PF16363 GDP-mannose 4,6 dehydratase Ami103574_RS02020 PF01061 ABC-2 type transporter Ami103574_RS02025 PF00005 ABC transporter Ami103574_RS02025 PF08239 Bacterial SH3 domain Ami103574_RS02035 PF00535 Glycosyl transferase family 2 Ami103574_RS02040 PF05523 WxcM-like, C-terminal Ami103574_RS02045 PF00483 Nucleotidyl transferase Ami103574_RS02050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Ami103574_RS02055 PF12464 Maltose acetyltransferase Ami103574_RS02055 PF00132 Bacterial transferase hexapeptide (six repeats) Ami103574_RS02065 PF00682 HMGL-like Ami103574_RS02065 PF07836 DmpG-like communication domain Ami103574_RS02080 PF00535 Glycosyl transferase family 2 Ami103574_RS02080 PF01501 Glycosyl transferase family 8 Ami103574_RS02095 PF16363 GDP-mannose 4,6 dehydratase Ami103574_RS02110 PF02397 Bacterial sugar transferase Ami103574_RS02125 PF02719 Polysaccharide biosynthesis protein Ami103574_RS02130 PF00342 Phosphoglucose isomerase Ami103574_RS02135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami103574_RS02135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami103574_RS02140 PF03816 Cell envelope-related transcriptional attenuator domain Ami103574_RS02145 PF03816 Cell envelope-related transcriptional attenuator domain Ami103574_RS02150 PF07498 Rho termination factor, N-terminal domain Ami103574_RS02150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami103574_RS02150 PF07497 Rho termination factor, RNA-binding domain Ami103574_RS02155 PF07136 Protein of unknown function (DUF1385) Ami103574_RS02160 PF05175 Methyltransferase small domain Ami103574_RS02160 PF17827 PrmC N-terminal domain Ami103574_RS02170 PF01197 Ribosomal protein L31 Ami103574_RS02175 PF03462 PCRF domain Ami103574_RS02175 PF00472 RF-1 domain Ami103574_RS02180 PF03481 Putative GTP-binding controlling metal-binding Ami103574_RS02180 PF01300 Telomere recombination Ami103574_RS02185 PF02502 Ribose/Galactose Isomerase Ami103574_RS02195 PF00579 tRNA synthetases class I (W and Y) Ami103574_RS02200 PF00005 ABC transporter Ami103574_RS02210 PF12704 MacB-like periplasmic core domain Ami103574_RS02210 PF00005 ABC transporter Ami103574_RS02210 PF02687 FtsX-like permease family Ami103574_RS02215 PF00072 Response regulator receiver domain Ami103574_RS02215 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS02220 PF14827 Double sensory domain of two-component sensor kinase Ami103574_RS02220 PF13426 PAS domain Ami103574_RS02220 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS02220 PF00672 HAMP domain Ami103574_RS02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS02225 PF02540 NAD synthase Ami103574_RS02225 PF00795 Carbon-nitrogen hydrolase Ami103574_RS02230 PF01336 OB-fold nucleic acid binding domain Ami103574_RS02230 PF01966 HD domain Ami103574_RS02235 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Ami103574_RS02235 PF13538 UvrD-like helicase C-terminal domain Ami103574_RS02235 PF14490 Helix-hairpin-helix containing domain Ami103574_RS02240 PF00156 Phosphoribosyl transferase domain Ami103574_RS02245 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Ami103574_RS02245 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Ami103574_RS02250 PF02457 DisA bacterial checkpoint controller nucleotide-binding Ami103574_RS02260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ami103574_RS02260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ami103574_RS02260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ami103574_RS02260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ami103574_RS02265 PF01380 SIS domain Ami103574_RS02275 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS02275 PF13426 PAS domain Ami103574_RS02275 PF00158 Sigma-54 interaction domain Ami103574_RS02280 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ami103574_RS02280 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS02285 PF13520 Amino acid permease Ami103574_RS02295 PF01546 Peptidase family M20/M25/M40 Ami103574_RS02295 PF07687 Peptidase dimerisation domain Ami103574_RS02300 PF07687 Peptidase dimerisation domain Ami103574_RS02300 PF01546 Peptidase family M20/M25/M40 Ami103574_RS02305 PF13520 Amino acid permease Ami103574_RS02310 PF00654 Voltage gated chloride channel Ami103574_RS02325 PF05221 S-adenosyl-L-homocysteine hydrolase Ami103574_RS02325 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Ami103574_RS02335 PF00749 tRNA synthetases class I (E and Q), catalytic domain Ami103574_RS02340 PF01522 Polysaccharide deacetylase Ami103574_RS02345 PF14821 Threonine synthase N terminus Ami103574_RS02345 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS02350 PF02142 MGS-like domain Ami103574_RS02365 PF01381 Helix-turn-helix Ami103574_RS02370 PF01381 Helix-turn-helix Ami103574_RS02385 PF04232 Stage V sporulation protein S (SpoVS) Ami103574_RS02395 PF01695 IstB-like ATP binding protein Ami103574_RS02460 PF00436 Single-strand binding protein family Ami103574_RS02655 PF04542 Sigma-70 region 2 Ami103574_RS02655 PF08281 Sigma-70, region 4 Ami103574_RS02710 PF04026 SpoVG Ami103574_RS02720 PF01478 Type IV leader peptidase family Ami103574_RS02720 PF06750 Bacterial Peptidase A24 N-terminal domain Ami103574_RS02735 PF00437 Type II/IV secretion system protein Ami103574_RS02805 PF12833 Helix-turn-helix domain Ami103574_RS02835 PF02374 Anion-transporting ATPase Ami103574_RS02840 PF06953 Arsenical resistance operon trans-acting repressor ArsD Ami103574_RS02850 PF01758 Sodium Bile acid symporter family Ami103574_RS02855 PF01022 Bacterial regulatory protein, arsR family Ami103574_RS02875 PF00877 NlpC/P60 family Ami103574_RS02910 PF08275 DNA primase catalytic core, N-terminal domain Ami103574_RS02910 PF01807 CHC2 zinc finger Ami103574_RS02920 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Ami103574_RS02920 PF01348 Type II intron maturase Ami103574_RS02945 PF00072 Response regulator receiver domain Ami103574_RS02945 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS02950 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS02960 PF04294 VanW like protein Ami103574_RS02965 PF07478 D-ala D-ala ligase C-terminus Ami103574_RS02965 PF01820 D-ala D-ala ligase N-terminus Ami103574_RS02970 PF02557 D-alanyl-D-alanine carboxypeptidase Ami103574_RS02975 PF00842 Alanine racemase, C-terminal domain Ami103574_RS02975 PF01168 Alanine racemase, N-terminal domain Ami103574_RS02975 PF01757 Acyltransferase family Ami103574_RS02990 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Ami103574_RS03025 PF00183 Hsp90 protein Ami103574_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS03035 PF11999 Protein of unknown function (DUF3494) Ami103574_RS03035 PF02368 Bacterial Ig-like domain (group 2) Ami103574_RS03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS03040 PF02743 Cache domain Ami103574_RS03040 PF00672 HAMP domain Ami103574_RS03060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ami103574_RS03060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ami103574_RS03065 PF02659 Putative manganese efflux pump Ami103574_RS03070 PF01725 Ham1 family Ami103574_RS03080 PF01842 ACT domain Ami103574_RS03080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ami103574_RS03080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ami103574_RS03085 PF00266 Aminotransferase class-V Ami103574_RS03090 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Ami103574_RS03090 PF01676 Metalloenzyme superfamily Ami103574_RS03095 PF00768 D-alanyl-D-alanine carboxypeptidase Ami103574_RS03095 PF07943 Penicillin-binding protein 5, C-terminal domain Ami103574_RS03100 PF02151 UvrB/uvrC motif Ami103574_RS03100 PF08459 UvrC Helix-hairpin-helix N-terminal Ami103574_RS03100 PF01541 GIY-YIG catalytic domain Ami103574_RS03105 PF06949 Protein of unknown function (DUF1292) Ami103574_RS03115 PF00460 Flagella basal body rod protein Ami103574_RS03115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami103574_RS03120 PF02049 Flagellar hook-basal body complex protein FliE Ami103574_RS03125 PF01514 Secretory protein of YscJ/FliF family Ami103574_RS03125 PF08345 Flagellar M-ring protein C-terminal Ami103574_RS03130 PF01706 FliG C-terminal domain Ami103574_RS03130 PF14842 FliG N-terminal domain Ami103574_RS03130 PF14841 FliG middle domain Ami103574_RS03140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami103574_RS03140 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ami103574_RS03140 PF18269 T3SS EscN ATPase C-terminal domain Ami103574_RS03165 PF00460 Flagella basal body rod protein Ami103574_RS03165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami103574_RS03175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Ami103574_RS03175 PF02154 Flagellar motor switch protein FliM Ami103574_RS03180 PF04509 CheC-like family Ami103574_RS03180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Ami103574_RS03185 PF00072 Response regulator receiver domain Ami103574_RS03195 PF00813 FliP family Ami103574_RS03200 PF01313 Bacterial export proteins, family 3 Ami103574_RS03205 PF01311 Bacterial export proteins, family 1 Ami103574_RS03210 PF01312 FlhB HrpN YscU SpaS Family Ami103574_RS03235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami103574_RS03235 PF00460 Flagella basal body rod protein Ami103574_RS03250 PF02623 FliW protein Ami103574_RS03255 PF02599 Global regulator protein family Ami103574_RS03260 PF00669 Bacterial flagellin N-terminal helical region Ami103574_RS03260 PF00700 Bacterial flagellin C-terminal helical region Ami103574_RS03270 PF02491 SHS2 domain inserted in FTSA Ami103574_RS03275 PF01339 CheB methylesterase Ami103574_RS03275 PF00072 Response regulator receiver domain Ami103574_RS03280 PF01739 CheR methyltransferase, SAM binding domain Ami103574_RS03280 PF03705 CheR methyltransferase, all-alpha domain Ami103574_RS03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS03285 PF02895 Signal transducing histidine kinase, homodimeric domain Ami103574_RS03285 PF09078 CheY binding Ami103574_RS03285 PF01627 Hpt domain Ami103574_RS03285 PF01584 CheW-like domain Ami103574_RS03290 PF00395 S-layer homology domain Ami103574_RS03290 PF06452 Carbohydrate family 9 binding domain-like Ami103574_RS03290 PF02018 Carbohydrate binding domain Ami103574_RS03290 PF00331 Glycosyl hydrolase family 10 Ami103574_RS03295 PF00460 Flagella basal body rod protein Ami103574_RS03300 PF00771 FHIPEP family Ami103574_RS03305 PF04542 Sigma-70 region 2 Ami103574_RS03305 PF04539 Sigma-70 region 3 Ami103574_RS03305 PF04545 Sigma-70, region 4 Ami103574_RS03310 PF00460 Flagella basal body rod protein Ami103574_RS03310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami103574_RS03315 PF00460 Flagella basal body rod protein Ami103574_RS03315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami103574_RS03325 PF04509 CheC-like family Ami103574_RS03330 PF03975 CheD chemotactic sensory transduction Ami103574_RS03340 PF13614 AAA domain Ami103574_RS03345 PF02465 Flagellar hook-associated protein 2 N-terminus Ami103574_RS03345 PF07195 Flagellar hook-associated protein 2 C-terminus Ami103574_RS03345 PF07196 Flagellin hook IN motif Ami103574_RS03360 PF00156 Phosphoribosyl transferase domain Ami103574_RS03365 PF02608 ABC transporter substrate-binding protein PnrA-like Ami103574_RS03390 PF01965 DJ-1/PfpI family Ami103574_RS03395 PF02811 PHP domain Ami103574_RS03405 PF04070 Domain of unknown function (DUF378) Ami103574_RS03410 PF02824 TGS domain Ami103574_RS03410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ami103574_RS03410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami103574_RS03410 PF03129 Anticodon binding domain Ami103574_RS03415 PF00294 pfkB family carbohydrate kinase Ami103574_RS03420 PF00338 Ribosomal protein S10p/S20e Ami103574_RS03425 PF00297 Ribosomal protein L3 Ami103574_RS03430 PF00573 Ribosomal protein L4/L1 family Ami103574_RS03435 PF00276 Ribosomal protein L23 Ami103574_RS03440 PF03947 Ribosomal Proteins L2, C-terminal domain Ami103574_RS03440 PF00181 Ribosomal Proteins L2, RNA binding domain Ami103574_RS03445 PF00203 Ribosomal protein S19 Ami103574_RS03450 PF00237 Ribosomal protein L22p/L17e Ami103574_RS03455 PF00189 Ribosomal protein S3, C-terminal domain Ami103574_RS03455 PF07650 KH domain Ami103574_RS03460 PF00252 Ribosomal protein L16p/L10e Ami103574_RS03465 PF00831 Ribosomal L29 protein Ami103574_RS03470 PF00366 Ribosomal protein S17 Ami103574_RS03475 PF00238 Ribosomal protein L14p/L23e Ami103574_RS03480 PF00467 KOW motif Ami103574_RS03480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Ami103574_RS03485 PF00673 ribosomal L5P family C-terminus Ami103574_RS03485 PF00281 Ribosomal protein L5 Ami103574_RS03490 PF00253 Ribosomal protein S14p/S29e Ami103574_RS03495 PF00410 Ribosomal protein S8 Ami103574_RS03500 PF00347 Ribosomal protein L6 Ami103574_RS03505 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ami103574_RS03510 PF00333 Ribosomal protein S5, N-terminal domain Ami103574_RS03510 PF03719 Ribosomal protein S5, C-terminal domain Ami103574_RS03515 PF00327 Ribosomal protein L30p/L7e Ami103574_RS03520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ami103574_RS03525 PF00344 SecY translocase Ami103574_RS03530 PF05191 Adenylate kinase, active site lid Ami103574_RS03535 PF00557 Metallopeptidase family M24 Ami103574_RS03540 PF01176 Translation initiation factor 1A / IF-1 Ami103574_RS03545 PF00444 Ribosomal protein L36 Ami103574_RS03550 PF00416 Ribosomal protein S13/S18 Ami103574_RS03555 PF00411 Ribosomal protein S11 Ami103574_RS03560 PF01479 S4 domain Ami103574_RS03560 PF00163 Ribosomal protein S4/S9 N-terminal domain Ami103574_RS03565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Ami103574_RS03565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Ami103574_RS03565 PF01000 RNA polymerase Rpb3/RpoA insert domain Ami103574_RS03570 PF01196 Ribosomal protein L17 Ami103574_RS03575 PF00005 ABC transporter Ami103574_RS03580 PF00005 ABC transporter Ami103574_RS03585 PF02361 Cobalt transport protein Ami103574_RS03595 PF02390 Putative methyltransferase Ami103574_RS03610 PF01553 Acyltransferase Ami103574_RS03620 PF07969 Amidohydrolase family Ami103574_RS03625 PF03606 C4-dicarboxylate anaerobic carrier Ami103574_RS03635 PF02378 Phosphotransferase system, EIIC Ami103574_RS03640 PF00037 4Fe-4S binding domain Ami103574_RS03645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami103574_RS03645 PF10371 Domain of unknown function Ami103574_RS03645 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ami103574_RS03645 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ami103574_RS03645 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ami103574_RS03650 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ami103574_RS03650 PF00175 Oxidoreductase NAD-binding domain Ami103574_RS03655 PF13247 4Fe-4S dicluster domain Ami103574_RS03655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ami103574_RS03655 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS03660 PF10996 Beta-Casp domain Ami103574_RS03660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Ami103574_RS03660 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS03665 PF02829 3H domain Ami103574_RS03665 PF08279 HTH domain Ami103574_RS03670 PF07687 Peptidase dimerisation domain Ami103574_RS03670 PF01546 Peptidase family M20/M25/M40 Ami103574_RS03680 PF00684 DnaJ central domain Ami103574_RS03680 PF01556 DnaJ C terminal domain Ami103574_RS03680 PF00226 DnaJ domain Ami103574_RS03690 PF05173 Dihydrodipicolinate reductase, C-terminus Ami103574_RS03690 PF01113 Dihydrodipicolinate reductase, N-terminus Ami103574_RS03705 PF00082 Subtilase family Ami103574_RS03715 PF00072 Response regulator receiver domain Ami103574_RS03715 PF04397 LytTr DNA-binding domain Ami103574_RS03750 PF05697 Bacterial trigger factor protein (TF) Ami103574_RS03750 PF05698 Bacterial trigger factor protein (TF) C-terminus Ami103574_RS03750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Ami103574_RS03755 PF00574 Clp protease Ami103574_RS03760 PF06689 ClpX C4-type zinc finger Ami103574_RS03760 PF10431 C-terminal, D2-small domain, of ClpB protein Ami103574_RS03760 PF07724 AAA domain (Cdc48 subfamily) Ami103574_RS03765 PF00004 ATPase family associated with various cellular activities (AAA) Ami103574_RS03765 PF05362 Lon protease (S16) C-terminal proteolytic domain Ami103574_RS03765 PF02190 ATP-dependent protease La (LON) substrate-binding domain Ami103574_RS03770 PF01926 50S ribosome-binding GTPase Ami103574_RS03785 PF06130 Phosphate propanoyltransferase Ami103574_RS03800 PF04203 Sortase domain Ami103574_RS03820 PF00482 Type II secretion system (T2SS), protein F Ami103574_RS03845 PF00437 Type II/IV secretion system protein Ami103574_RS03850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ami103574_RS03855 PF08486 Stage II sporulation protein Ami103574_RS03870 PF00563 EAL domain Ami103574_RS03870 PF08668 HDOD domain Ami103574_RS03885 PF07670 Nucleoside recognition Ami103574_RS03885 PF02421 Ferrous iron transport protein B Ami103574_RS03885 PF17910 FeoB cytosolic helical domain Ami103574_RS03885 PF07664 Ferrous iron transport protein B C terminus Ami103574_RS03900 PF00258 Flavodoxin Ami103574_RS03910 PF10609 NUBPL iron-transfer P-loop NTPase Ami103574_RS03915 PF02001 Protein of unknown function DUF134 Ami103574_RS03920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS03920 PF16591 Helical bimodular sensor domain Ami103574_RS03920 PF00672 HAMP domain Ami103574_RS03925 PF01144 Coenzyme A transferase Ami103574_RS03930 PF01144 Coenzyme A transferase Ami103574_RS03935 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS03945 PF13520 Amino acid permease Ami103574_RS03960 PF01969 Protein of unknown function DUF111 Ami103574_RS03980 PF00005 ABC transporter Ami103574_RS03990 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS03990 PF16736 Single Cache-like Ami103574_RS03990 PF00989 PAS fold Ami103574_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS03995 PF00072 Response regulator receiver domain Ami103574_RS03995 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS04015 PF01476 LysM domain Ami103574_RS04015 PF00704 Glycosyl hydrolases family 18 Ami103574_RS04020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS04020 PF00672 HAMP domain Ami103574_RS04020 PF02203 Tar ligand binding domain homologue Ami103574_RS04020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS04020 PF00672 HAMP domain Ami103574_RS04020 PF02203 Tar ligand binding domain homologue Ami103574_RS04025 PF00364 Biotin-requiring enzyme Ami103574_RS04025 PF00682 HMGL-like Ami103574_RS04025 PF02436 Conserved carboxylase domain Ami103574_RS04030 PF01131 DNA topoisomerase Ami103574_RS04030 PF01751 Toprim domain Ami103574_RS04035 PF06874 Firmicute fructose-1,6-bisphosphatase Ami103574_RS04040 PF04204 Homoserine O-succinyltransferase Ami103574_RS04050 PF00809 Pterin binding enzyme Ami103574_RS04050 PF02310 B12 binding domain Ami103574_RS04050 PF02607 B12 binding domain Ami103574_RS04050 PF02965 Vitamin B12 dependent methionine synthase, activation domain Ami103574_RS04050 PF02574 Homocysteine S-methyltransferase Ami103574_RS04055 PF12848 ABC transporter Ami103574_RS04055 PF00005 ABC transporter Ami103574_RS04060 PF00005 ABC transporter Ami103574_RS04060 PF00664 ABC transporter transmembrane region Ami103574_RS04065 PF00664 ABC transporter transmembrane region Ami103574_RS04065 PF00005 ABC transporter Ami103574_RS04080 PF00149 Calcineurin-like phosphoesterase Ami103574_RS04090 PF04542 Sigma-70 region 2 Ami103574_RS04090 PF08281 Sigma-70, region 4 Ami103574_RS04100 PF13732 Domain of unknown function (DUF4162) Ami103574_RS04100 PF00005 ABC transporter Ami103574_RS04145 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Ami103574_RS04195 PF00395 S-layer homology domain Ami103574_RS04195 PF00963 Cohesin domain Ami103574_RS04205 PF01076 Plasmid recombination enzyme Ami103574_RS04240 PF13408 Recombinase zinc beta ribbon domain Ami103574_RS04240 PF00239 Resolvase, N terminal domain Ami103574_RS04240 PF07508 Recombinase Ami103574_RS04290 PF04232 Stage V sporulation protein S (SpoVS) Ami103574_RS04295 PF15714 Stage V sporulation protein T C-terminal, transcription factor Ami103574_RS04295 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ami103574_RS04415 PF00574 Clp protease Ami103574_RS04510 PF02368 Bacterial Ig-like domain (group 2) Ami103574_RS04510 PF11999 Protein of unknown function (DUF3494) Ami103574_RS04535 PF05067 Manganese containing catalase Ami103574_RS04605 PF04865 Baseplate J-like protein Ami103574_RS04640 PF01551 Peptidase family M23 Ami103574_RS04660 PF03372 Endonuclease/Exonuclease/phosphatase family Ami103574_RS04665 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS04690 PF13443 Cro/C1-type HTH DNA-binding domain Ami103574_RS04700 PF13472 GDSL-like Lipase/Acylhydrolase family Ami103574_RS04710 PF03061 Thioesterase superfamily Ami103574_RS04715 PF01938 TRAM domain Ami103574_RS04715 PF05958 tRNA (Uracil-5-)-methyltransferase Ami103574_RS04720 PF03466 LysR substrate binding domain Ami103574_RS04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS04725 PF01177 Asp/Glu/Hydantoin racemase Ami103574_RS04730 PF00155 Aminotransferase class I and II Ami103574_RS04735 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS04735 PF13426 PAS domain Ami103574_RS04735 PF00158 Sigma-54 interaction domain Ami103574_RS04745 PF13520 Amino acid permease Ami103574_RS04750 PF03576 Peptidase family S58 Ami103574_RS04760 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS04760 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ami103574_RS04770 PF01965 DJ-1/PfpI family Ami103574_RS04790 PF00872 Transposase, Mutator family Ami103574_RS04800 PF00270 DEAD/DEAH box helicase Ami103574_RS04800 PF18019 HD domain Ami103574_RS04800 PF18395 Cas3 C-terminal domain Ami103574_RS04815 PF09344 CT1975-like protein Ami103574_RS04825 PF08798 CRISPR associated protein Ami103574_RS04830 PF01867 CRISPR associated protein Cas1 Ami103574_RS04835 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ami103574_RS04835 PF14480 DNA polymerase III polC-type N-terminus I Ami103574_RS04835 PF11490 DNA polymerase III polC-type N-terminus II Ami103574_RS04835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ami103574_RS04835 PF14579 Helix-hairpin-helix motif Ami103574_RS04835 PF00929 Exonuclease Ami103574_RS04835 PF02811 PHP domain Ami103574_RS04860 PF01209 ubiE/COQ5 methyltransferase family Ami103574_RS04865 PF13426 PAS domain Ami103574_RS04865 PF00563 EAL domain Ami103574_RS04865 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS04870 PF01638 HxlR-like helix-turn-helix Ami103574_RS04885 PF01565 FAD binding domain Ami103574_RS04885 PF08031 Berberine and berberine like Ami103574_RS04890 PF01047 MarR family Ami103574_RS04900 PF01795 MraW methylase family Ami103574_RS04905 PF05853 beta-keto acid cleavage enzyme Ami103574_RS04910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS04910 PF03466 LysR substrate binding domain Ami103574_RS04915 PF02803 Thiolase, C-terminal domain Ami103574_RS04915 PF00108 Thiolase, N-terminal domain Ami103574_RS04920 PF01144 Coenzyme A transferase Ami103574_RS04925 PF01144 Coenzyme A transferase Ami103574_RS04930 PF07690 Major Facilitator Superfamily Ami103574_RS04940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ami103574_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS04950 PF03358 NADPH-dependent FMN reductase Ami103574_RS04950 PF00890 FAD binding domain Ami103574_RS04950 PF04205 FMN-binding domain Ami103574_RS04960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Ami103574_RS04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS04970 PF00378 Enoyl-CoA hydratase/isomerase Ami103574_RS04975 PF00183 Hsp90 protein Ami103574_RS04995 PF18766 SWI2/SNF2 ATPase Ami103574_RS04995 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Ami103574_RS04995 PF12008 Type I restriction and modification enzyme - subunit R C terminal Ami103574_RS05010 PF02384 N-6 DNA Methylase Ami103574_RS05010 PF12161 HsdM N-terminal domain Ami103574_RS05015 PF13411 MerR HTH family regulatory protein Ami103574_RS05020 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS05030 PF07581 The GLUG motif Ami103574_RS05030 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Ami103574_RS05040 PF00005 ABC transporter Ami103574_RS05040 PF02687 FtsX-like permease family Ami103574_RS05040 PF12704 MacB-like periplasmic core domain Ami103574_RS05045 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS05045 PF00672 HAMP domain Ami103574_RS05050 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS05050 PF00072 Response regulator receiver domain Ami103574_RS05055 PF01047 MarR family Ami103574_RS05065 PF00881 Nitroreductase family Ami103574_RS05070 PF08241 Methyltransferase domain Ami103574_RS05075 PF02082 Transcriptional regulator Ami103574_RS05085 PF00005 ABC transporter Ami103574_RS05085 PF00664 ABC transporter transmembrane region Ami103574_RS05090 PF08021 Siderophore-interacting FAD-binding domain Ami103574_RS05090 PF00005 ABC transporter Ami103574_RS05090 PF00664 ABC transporter transmembrane region Ami103574_RS05090 PF04954 Siderophore-interacting protein Ami103574_RS05100 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS05100 PF00258 Flavodoxin Ami103574_RS05100 PF00301 Rubredoxin Ami103574_RS05105 PF02245 Methylpurine-DNA glycosylase (MPG) Ami103574_RS05110 PF01047 MarR family Ami103574_RS05115 PF00999 Sodium/hydrogen exchanger family Ami103574_RS05125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Ami103574_RS05135 PF00155 Aminotransferase class I and II Ami103574_RS05135 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS05140 PF03591 AzlC protein Ami103574_RS05145 PF05437 Branched-chain amino acid transport protein (AzlD) Ami103574_RS05160 PF01638 HxlR-like helix-turn-helix Ami103574_RS05165 PF13520 Amino acid permease Ami103574_RS05185 PF01618 MotA/TolQ/ExbB proton channel family Ami103574_RS05190 PF13677 Membrane MotB of proton-channel complex MotA/MotB Ami103574_RS05190 PF00691 OmpA family Ami103574_RS05195 PF00679 Elongation factor G C-terminus Ami103574_RS05195 PF14492 Elongation Factor G, domain II Ami103574_RS05195 PF03764 Elongation factor G, domain IV Ami103574_RS05195 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS05200 PF00324 Amino acid permease Ami103574_RS05205 PF00155 Aminotransferase class I and II Ami103574_RS05210 PF02423 Ornithine cyclodeaminase/mu-crystallin family Ami103574_RS05220 PF13556 PucR C-terminal helix-turn-helix domain Ami103574_RS05220 PF17853 GGDEF-like domain Ami103574_RS05220 PF07905 Purine catabolism regulatory protein-like family Ami103574_RS05230 PF00395 S-layer homology domain Ami103574_RS05230 PF00963 Cohesin domain Ami103574_RS05245 PF00731 AIR carboxylase Ami103574_RS05255 PF01381 Helix-turn-helix Ami103574_RS05260 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS05275 PF13411 MerR HTH family regulatory protein Ami103574_RS05290 PF00005 ABC transporter Ami103574_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS05305 PF01551 Peptidase family M23 Ami103574_RS05310 PF01544 CorA-like Mg2+ transporter protein Ami103574_RS05315 PF03063 Prismane/CO dehydrogenase family Ami103574_RS05320 PF03551 Transcriptional regulator PadR-like family Ami103574_RS05355 PF08402 TOBE domain Ami103574_RS05355 PF00005 ABC transporter Ami103574_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS05370 PF13416 Bacterial extracellular solute-binding protein Ami103574_RS05375 PF00484 Carbonic anhydrase Ami103574_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS05385 PF09084 NMT1/THI5 like Ami103574_RS05390 PF00005 ABC transporter Ami103574_RS05395 PF01026 TatD related DNase Ami103574_RS05415 PF00072 Response regulator receiver domain Ami103574_RS05415 PF04397 LytTr DNA-binding domain Ami103574_RS05420 PF02368 Bacterial Ig-like domain (group 2) Ami103574_RS05425 PF12833 Helix-turn-helix domain Ami103574_RS05430 PF00557 Metallopeptidase family M24 Ami103574_RS05430 PF02810 SEC-C motif Ami103574_RS05440 PF00132 Bacterial transferase hexapeptide (six repeats) Ami103574_RS05450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ami103574_RS05460 PF00331 Glycosyl hydrolase family 10 Ami103574_RS05460 PF06452 Carbohydrate family 9 binding domain-like Ami103574_RS05460 PF02018 Carbohydrate binding domain Ami103574_RS05460 PF00395 S-layer homology domain Ami103574_RS05465 PF00082 Subtilase family Ami103574_RS05475 PF01297 Zinc-uptake complex component A periplasmic Ami103574_RS05475 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Ami103574_RS05480 PF00005 ABC transporter Ami103574_RS05485 PF00950 ABC 3 transport family Ami103574_RS05495 PF03707 Bacterial signalling protein N terminal repeat Ami103574_RS05495 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS05495 PF00563 EAL domain Ami103574_RS05500 PF13426 PAS domain Ami103574_RS05500 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS05500 PF00563 EAL domain Ami103574_RS05510 PF00155 Aminotransferase class I and II Ami103574_RS05515 PF02423 Ornithine cyclodeaminase/mu-crystallin family Ami103574_RS05525 PF02525 Flavodoxin-like fold Ami103574_RS05530 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS05530 PF00158 Sigma-54 interaction domain Ami103574_RS05530 PF13426 PAS domain Ami103574_RS05535 PF00324 Amino acid permease Ami103574_RS05540 PF01546 Peptidase family M20/M25/M40 Ami103574_RS05545 PF00005 ABC transporter Ami103574_RS05545 PF00664 ABC transporter transmembrane region Ami103574_RS05550 PF00005 ABC transporter Ami103574_RS05550 PF00664 ABC transporter transmembrane region Ami103574_RS05560 PF08331 Domain of unknown function (DUF1730) Ami103574_RS05570 PF03190 Protein of unknown function, DUF255 Ami103574_RS05575 PF03190 Protein of unknown function, DUF255 Ami103574_RS05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS05585 PF18698 Histidine kinase sensor domain Ami103574_RS05585 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS05585 PF00672 HAMP domain Ami103574_RS05590 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS05590 PF00072 Response regulator receiver domain Ami103574_RS05595 PF00395 S-layer homology domain Ami103574_RS05600 PF13411 MerR HTH family regulatory protein Ami103574_RS05600 PF06445 GyrI-like small molecule binding domain Ami103574_RS05605 PF00893 Small Multidrug Resistance protein Ami103574_RS05625 PF00936 BMC domain Ami103574_RS05630 PF00936 BMC domain Ami103574_RS05635 PF00171 Aldehyde dehydrogenase family Ami103574_RS05635 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS05640 PF02901 Pyruvate formate lyase-like Ami103574_RS05640 PF01228 Glycine radical Ami103574_RS05645 PF04055 Radical SAM superfamily Ami103574_RS05645 PF13187 4Fe-4S dicluster domain Ami103574_RS05650 PF00936 BMC domain Ami103574_RS05675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami103574_RS05675 PF13237 4Fe-4S dicluster domain Ami103574_RS05675 PF10531 SLBB domain Ami103574_RS05675 PF13375 RnfC Barrel sandwich hybrid domain Ami103574_RS05690 PF00936 BMC domain Ami103574_RS05695 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS05695 PF00171 Aldehyde dehydrogenase family Ami103574_RS05700 PF06130 Phosphate propanoyltransferase Ami103574_RS05705 PF00936 BMC domain Ami103574_RS05740 PF00696 Amino acid kinase family Ami103574_RS05745 PF03466 LysR substrate binding domain Ami103574_RS05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS05755 PF00171 Aldehyde dehydrogenase family Ami103574_RS05770 PF04232 Stage V sporulation protein S (SpoVS) Ami103574_RS05780 PF12848 ABC transporter Ami103574_RS05780 PF00005 ABC transporter Ami103574_RS05785 PF00696 Amino acid kinase family Ami103574_RS05790 PF14748 Pyrroline-5-carboxylate reductase dimerisation Ami103574_RS05790 PF03807 NADP oxidoreductase coenzyme F420-dependent Ami103574_RS05795 PF00293 NUDIX domain Ami103574_RS05805 PF00589 Phage integrase family Ami103574_RS05805 PF02899 Phage integrase, N-terminal SAM-like domain Ami103574_RS05810 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami103574_RS05815 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS05820 PF00005 ABC transporter Ami103574_RS05825 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami103574_RS05830 PF01245 Ribosomal protein L19 Ami103574_RS05835 PF01926 50S ribosome-binding GTPase Ami103574_RS05840 PF01351 Ribonuclease HII Ami103574_RS05845 PF02219 Methylenetetrahydrofolate reductase Ami103574_RS05850 PF01268 Formate--tetrahydrofolate ligase Ami103574_RS05855 PF04961 Formiminotransferase-cyclodeaminase Ami103574_RS05860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ami103574_RS05860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Ami103574_RS05865 PF00490 Delta-aminolevulinic acid dehydratase Ami103574_RS05870 PF00202 Aminotransferase class-III Ami103574_RS05875 PF02583 Metal-sensitive transcriptional repressor Ami103574_RS05880 PF00403 Heavy-metal-associated domain Ami103574_RS05890 PF06180 Cobalt chelatase (CbiK) Ami103574_RS05895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami103574_RS05900 PF01488 Shikimate / quinate 5-dehydrogenase Ami103574_RS05900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Ami103574_RS05900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Ami103574_RS05905 PF01488 Shikimate / quinate 5-dehydrogenase Ami103574_RS05905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Ami103574_RS05910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Ami103574_RS05910 PF03900 Porphobilinogen deaminase, C-terminal domain Ami103574_RS05915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami103574_RS05915 PF02602 Uroporphyrinogen-III synthase HemD Ami103574_RS05920 PF17755 UvrA DNA-binding domain Ami103574_RS05920 PF17760 UvrA interaction domain Ami103574_RS05920 PF00005 ABC transporter Ami103574_RS05930 PF01381 Helix-turn-helix Ami103574_RS05945 PF13649 Methyltransferase domain Ami103574_RS05950 PF00440 Bacterial regulatory proteins, tetR family Ami103574_RS05960 PF01381 Helix-turn-helix Ami103574_RS05980 PF01327 Polypeptide deformylase Ami103574_RS06005 PF01012 Electron transfer flavoprotein domain Ami103574_RS06010 PF00766 Electron transfer flavoprotein FAD-binding domain Ami103574_RS06010 PF01012 Electron transfer flavoprotein domain Ami103574_RS06015 PF01565 FAD binding domain Ami103574_RS06015 PF02913 FAD linked oxidases, C-terminal domain Ami103574_RS06020 PF00155 Aminotransferase class I and II Ami103574_RS06025 PF00440 Bacterial regulatory proteins, tetR family Ami103574_RS06025 PF08361 MAATS-type transcriptional repressor, C-terminal region Ami103574_RS06030 PF00664 ABC transporter transmembrane region Ami103574_RS06030 PF00005 ABC transporter Ami103574_RS06035 PF00005 ABC transporter Ami103574_RS06035 PF00664 ABC transporter transmembrane region Ami103574_RS06040 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS06040 PF08448 PAS fold Ami103574_RS06055 PF10458 Valyl tRNA synthetase tRNA binding arm Ami103574_RS06055 PF08264 Anticodon-binding domain of tRNA Ami103574_RS06055 PF00133 tRNA synthetases class I (I, L, M and V) Ami103574_RS06060 PF08245 Mur ligase middle domain Ami103574_RS06060 PF02875 Mur ligase family, glutamate ligase domain Ami103574_RS06065 PF00781 Diacylglycerol kinase catalytic domain Ami103574_RS06075 PF00583 Acetyltransferase (GNAT) family Ami103574_RS06080 PF11738 Protein of unknown function (DUF3298) Ami103574_RS06080 PF01522 Polysaccharide deacetylase Ami103574_RS06080 PF13739 Deacetylase PdaC Ami103574_RS06090 PF02016 LD-carboxypeptidase N-terminal domain Ami103574_RS06090 PF17676 LD-carboxypeptidase C-terminal domain Ami103574_RS06095 PF07670 Nucleoside recognition Ami103574_RS06100 PF07670 Nucleoside recognition Ami103574_RS06120 PF01546 Peptidase family M20/M25/M40 Ami103574_RS06120 PF07687 Peptidase dimerisation domain Ami103574_RS06125 PF00324 Amino acid permease Ami103574_RS06130 PF07687 Peptidase dimerisation domain Ami103574_RS06130 PF01546 Peptidase family M20/M25/M40 Ami103574_RS06135 PF07969 Amidohydrolase family Ami103574_RS06140 PF07969 Amidohydrolase family Ami103574_RS06155 PF02504 Fatty acid synthesis protein Ami103574_RS06160 PF00035 Double-stranded RNA binding motif Ami103574_RS06160 PF14622 Ribonuclease-III-like Ami103574_RS06165 PF02463 RecF/RecN/SMC N terminal domain Ami103574_RS06165 PF06470 SMC proteins Flexible Hinge Domain Ami103574_RS06170 PF02881 SRP54-type protein, helical bundle domain Ami103574_RS06170 PF00448 SRP54-type protein, GTPase domain Ami103574_RS06175 PF01926 50S ribosome-binding GTPase Ami103574_RS06175 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Ami103574_RS06180 PF02660 Glycerol-3-phosphate acyltransferase Ami103574_RS06185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Ami103574_RS06185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ami103574_RS06190 PF04055 Radical SAM superfamily Ami103574_RS06190 PF00919 Uncharacterized protein family UPF0004 Ami103574_RS06190 PF01938 TRAM domain Ami103574_RS06205 PF01515 Phosphate acetyl/butaryl transferase Ami103574_RS06210 PF00871 Acetokinase family Ami103574_RS06215 PF00155 Aminotransferase class I and II Ami103574_RS06235 PF03965 Penicillinase repressor Ami103574_RS06240 PF09547 Stage IV sporulation protein A (spore_IV_A) Ami103574_RS06250 PF07690 Major Facilitator Superfamily Ami103574_RS06260 PF12849 PBP superfamily domain Ami103574_RS06265 PF13091 PLD-like domain Ami103574_RS06265 PF13396 Phospholipase_D-nuclease N-terminal Ami103574_RS06270 PF01476 LysM domain Ami103574_RS06270 PF00877 NlpC/P60 family Ami103574_RS06275 PF02163 Peptidase family M50 Ami103574_RS06280 PF01638 HxlR-like helix-turn-helix Ami103574_RS06285 PF17871 AAA lid domain Ami103574_RS06285 PF00004 ATPase family associated with various cellular activities (AAA) Ami103574_RS06285 PF07724 AAA domain (Cdc48 subfamily) Ami103574_RS06285 PF10431 C-terminal, D2-small domain, of ClpB protein Ami103574_RS06285 PF02861 Clp amino terminal domain, pathogenicity island component Ami103574_RS06290 PF01228 Glycine radical Ami103574_RS06290 PF02901 Pyruvate formate lyase-like Ami103574_RS06295 PF01297 Zinc-uptake complex component A periplasmic Ami103574_RS06300 PF00005 ABC transporter Ami103574_RS06305 PF00950 ABC 3 transport family Ami103574_RS06310 PF01475 Ferric uptake regulator family Ami103574_RS06315 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS06315 PF13426 PAS domain Ami103574_RS06315 PF00158 Sigma-54 interaction domain Ami103574_RS06320 PF01144 Coenzyme A transferase Ami103574_RS06325 PF01144 Coenzyme A transferase Ami103574_RS06330 PF02447 GntP family permease Ami103574_RS06335 PF05853 beta-keto acid cleavage enzyme Ami103574_RS06340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami103574_RS06340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami103574_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS06360 PF03466 LysR substrate binding domain Ami103574_RS06365 PF00271 Helicase conserved C-terminal domain Ami103574_RS06365 PF00270 DEAD/DEAH box helicase Ami103574_RS06385 PF00817 impB/mucB/samB family Ami103574_RS06385 PF11799 impB/mucB/samB family C-terminal domain Ami103574_RS06410 PF00404 Dockerin type I domain Ami103574_RS06410 PF00150 Cellulase (glycosyl hydrolase family 5) Ami103574_RS06410 PF03425 Carbohydrate binding domain (family 11) Ami103574_RS06410 PF02156 Glycosyl hydrolase family 26 Ami103574_RS06425 PF01546 Peptidase family M20/M25/M40 Ami103574_RS06425 PF07687 Peptidase dimerisation domain Ami103574_RS06435 PF01473 Putative cell wall binding repeat Ami103574_RS06435 PF02324 Glycosyl hydrolase family 70 Ami103574_RS06440 PF00072 Response regulator receiver domain Ami103574_RS06455 PF02421 Ferrous iron transport protein B Ami103574_RS06455 PF07670 Nucleoside recognition Ami103574_RS06455 PF07664 Ferrous iron transport protein B C terminus Ami103574_RS06455 PF17910 FeoB cytosolic helical domain Ami103574_RS06480 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Ami103574_RS06480 PF01676 Metalloenzyme superfamily Ami103574_RS06500 PF00331 Glycosyl hydrolase family 10 Ami103574_RS06500 PF00395 S-layer homology domain Ami103574_RS06500 PF06452 Carbohydrate family 9 binding domain-like Ami103574_RS06500 PF02018 Carbohydrate binding domain Ami103574_RS06505 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Ami103574_RS06510 PF08369 Proto-chlorophyllide reductase 57 kD subunit Ami103574_RS06510 PF00148 Nitrogenase component 1 type Oxidoreductase Ami103574_RS06520 PF12705 PD-(D/E)XK nuclease superfamily Ami103574_RS06520 PF13361 UvrD-like helicase C-terminal domain Ami103574_RS06520 PF00580 UvrD/REP helicase N-terminal domain Ami103574_RS06530 PF01546 Peptidase family M20/M25/M40 Ami103574_RS06540 PF03590 Aspartate-ammonia ligase Ami103574_RS06545 PF01343 Peptidase family S49 Ami103574_RS06550 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Ami103574_RS06555 PF02978 Signal peptide binding domain Ami103574_RS06555 PF00448 SRP54-type protein, GTPase domain Ami103574_RS06555 PF02881 SRP54-type protein, helical bundle domain Ami103574_RS06560 PF00886 Ribosomal protein S16 Ami103574_RS06570 PF01782 RimM N-terminal domain Ami103574_RS06570 PF05239 PRC-barrel domain Ami103574_RS06575 PF01746 tRNA (Guanine-1)-methyltransferase Ami103574_RS06585 PF01168 Alanine racemase, N-terminal domain Ami103574_RS06590 PF04472 Cell division protein SepF Ami103574_RS06600 PF05103 DivIVA protein Ami103574_RS06605 PF01252 Signal peptidase (SPase) II Ami103574_RS06610 PF00849 RNA pseudouridylate synthase Ami103574_RS06610 PF01479 S4 domain Ami103574_RS06615 PF01613 Flavin reductase like domain Ami103574_RS06625 PF05670 NFACT protein RNA binding domain Ami103574_RS06630 PF08340 Domain of unknown function (DUF1732) Ami103574_RS06630 PF03755 YicC-like family, N-terminal region Ami103574_RS06635 PF00625 Guanylate kinase Ami103574_RS06640 PF01192 RNA polymerase Rpb6 Ami103574_RS06650 PF00318 Ribosomal protein S2 Ami103574_RS06655 PF00889 Elongation factor TS Ami103574_RS06660 PF01966 HD domain Ami103574_RS06665 PF00696 Amino acid kinase family Ami103574_RS06670 PF01765 Ribosome recycling factor Ami103574_RS06675 PF01255 Putative undecaprenyl diphosphate synthase Ami103574_RS06685 PF13288 DXP reductoisomerase C-terminal domain Ami103574_RS06685 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Ami103574_RS06685 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ami103574_RS06690 PF02163 Peptidase family M50 Ami103574_RS06690 PF17820 PDZ domain Ami103574_RS06695 PF04551 GcpE protein Ami103574_RS06705 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ami103574_RS06705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ami103574_RS06705 PF11490 DNA polymerase III polC-type N-terminus II Ami103574_RS06705 PF14579 Helix-hairpin-helix motif Ami103574_RS06705 PF02811 PHP domain Ami103574_RS06705 PF00929 Exonuclease Ami103574_RS06710 PF14535 AMP-binding enzyme C-terminal domain Ami103574_RS06710 PF00501 AMP-binding enzyme Ami103574_RS06720 PF17384 RimP C-terminal SH3 domain Ami103574_RS06720 PF02576 RimP N-terminal domain Ami103574_RS06725 PF00575 S1 RNA binding domain Ami103574_RS06725 PF08529 NusA N-terminal domain Ami103574_RS06725 PF13184 NusA-like KH domain Ami103574_RS06735 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Ami103574_RS06740 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS06740 PF11987 Translation-initiation factor 2 Ami103574_RS06740 PF04760 Translation initiation factor IF-2, N-terminal region Ami103574_RS06745 PF02033 Ribosome-binding factor A Ami103574_RS06750 PF01368 DHH family Ami103574_RS06750 PF02272 DHHA1 domain Ami103574_RS06755 PF16198 tRNA pseudouridylate synthase B C-terminal domain Ami103574_RS06755 PF01509 TruB family pseudouridylate synthase (N terminal domain) Ami103574_RS06760 PF06574 FAD synthetase Ami103574_RS06760 PF01687 Riboflavin kinase Ami103574_RS06765 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS06765 PF00563 EAL domain Ami103574_RS06765 PF01590 GAF domain Ami103574_RS06765 PF00360 Phytochrome region Ami103574_RS06770 PF00312 Ribosomal protein S15 Ami103574_RS06775 PF03725 3' exoribonuclease family, domain 2 Ami103574_RS06775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Ami103574_RS06775 PF00013 KH domain Ami103574_RS06775 PF00575 S1 RNA binding domain Ami103574_RS06775 PF01138 3' exoribonuclease family, domain 1 Ami103574_RS06780 PF01381 Helix-turn-helix Ami103574_RS06785 PF00884 Sulfatase Ami103574_RS06795 PF00072 Response regulator receiver domain Ami103574_RS06795 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS06800 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS06800 PF00989 PAS fold Ami103574_RS06800 PF16736 Single Cache-like Ami103574_RS06805 PF12704 MacB-like periplasmic core domain Ami103574_RS06805 PF02687 FtsX-like permease family Ami103574_RS06805 PF00005 ABC transporter Ami103574_RS06815 PF06580 Histidine kinase Ami103574_RS06815 PF07694 5TMR of 5TMR-LYT Ami103574_RS06820 PF00072 Response regulator receiver domain Ami103574_RS06820 PF04397 LytTr DNA-binding domain Ami103574_RS06835 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Ami103574_RS06835 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Ami103574_RS06855 PF00672 HAMP domain Ami103574_RS06855 PF02743 Cache domain Ami103574_RS06855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS06910 PF00005 ABC transporter Ami103574_RS06910 PF13732 Domain of unknown function (DUF4162) Ami103574_RS06935 PF13426 PAS domain Ami103574_RS06935 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS06935 PF00158 Sigma-54 interaction domain Ami103574_RS06940 PF01386 Ribosomal L25p family Ami103574_RS06940 PF14693 Ribosomal protein TL5, C-terminal domain Ami103574_RS06945 PF00324 Amino acid permease Ami103574_RS06950 PF01546 Peptidase family M20/M25/M40 Ami103574_RS06955 PF02515 CoA-transferase family III Ami103574_RS06960 PF00378 Enoyl-CoA hydratase/isomerase Ami103574_RS06970 PF00248 Aldo/keto reductase family Ami103574_RS06975 PF00293 NUDIX domain Ami103574_RS06980 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Ami103574_RS06980 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Ami103574_RS06985 PF09308 LuxQ, periplasmic Ami103574_RS06985 PF00072 Response regulator receiver domain Ami103574_RS06985 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS06990 PF00072 Response regulator receiver domain Ami103574_RS06995 PF12850 Calcineurin-like phosphoesterase superfamily domain Ami103574_RS07005 PF02308 MgtC family Ami103574_RS07015 PF00764 Arginosuccinate synthase Ami103574_RS07020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Ami103574_RS07020 PF01565 FAD binding domain Ami103574_RS07030 PF01168 Alanine racemase, N-terminal domain Ami103574_RS07035 PF03668 P-loop ATPase protein family Ami103574_RS07040 PF05853 beta-keto acid cleavage enzyme Ami103574_RS07045 PF02650 WhiA C-terminal HTH domain Ami103574_RS07045 PF14527 WhiA LAGLIDADG-like domain Ami103574_RS07045 PF10298 WhiA N-terminal LAGLIDADG-like domain Ami103574_RS07050 PF05167 Uncharacterised ACR (DUF711) Ami103574_RS07060 PF04055 Radical SAM superfamily Ami103574_RS07060 PF06969 HemN C-terminal domain Ami103574_RS07070 PF03167 Uracil DNA glycosylase superfamily Ami103574_RS07090 PF04397 LytTr DNA-binding domain Ami103574_RS07090 PF00072 Response regulator receiver domain Ami103574_RS07100 PF00963 Cohesin domain Ami103574_RS07100 PF00395 S-layer homology domain Ami103574_RS07125 PF02397 Bacterial sugar transferase Ami103574_RS07130 PF13439 Glycosyltransferase Family 4 Ami103574_RS07130 PF00534 Glycosyl transferases group 1 Ami103574_RS07170 PF16363 GDP-mannose 4,6 dehydratase Ami103574_RS07175 PF00342 Phosphoglucose isomerase Ami103574_RS07195 PF01255 Putative undecaprenyl diphosphate synthase Ami103574_RS07200 PF13416 Bacterial extracellular solute-binding protein Ami103574_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS07210 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS07215 PF00005 ABC transporter Ami103574_RS07215 PF08402 TOBE domain Ami103574_RS07220 PF00294 pfkB family carbohydrate kinase Ami103574_RS07225 PF03747 ADP-ribosylglycohydrolase Ami103574_RS07235 PF00924 Mechanosensitive ion channel Ami103574_RS07235 PF05552 Conserved TM helix Ami103574_RS07240 PF02785 Biotin carboxylase C-terminal domain Ami103574_RS07240 PF00289 Biotin carboxylase, N-terminal domain Ami103574_RS07240 PF00364 Biotin-requiring enzyme Ami103574_RS07240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ami103574_RS07240 PF00682 HMGL-like Ami103574_RS07240 PF02436 Conserved carboxylase domain Ami103574_RS07245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ami103574_RS07245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Ami103574_RS07250 PF00571 CBS domain Ami103574_RS07250 PF01769 Divalent cation transporter Ami103574_RS07250 PF03448 MgtE intracellular N domain Ami103574_RS07255 PF01256 Carbohydrate kinase Ami103574_RS07255 PF03853 YjeF-related protein N-terminus Ami103574_RS07260 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Ami103574_RS07280 PF03808 Glycosyl transferase WecB/TagA/CpsF family Ami103574_RS07285 PF00456 Transketolase, thiamine diphosphate binding domain Ami103574_RS07290 PF02780 Transketolase, C-terminal domain Ami103574_RS07290 PF02779 Transketolase, pyrimidine binding domain Ami103574_RS07300 PF04715 Anthranilate synthase component I, N terminal region Ami103574_RS07300 PF00425 chorismate binding enzyme Ami103574_RS07305 PF02885 Glycosyl transferase family, helical bundle domain Ami103574_RS07305 PF00117 Glutamine amidotransferase class-I Ami103574_RS07305 PF00591 Glycosyl transferase family, a/b domain Ami103574_RS07310 PF02885 Glycosyl transferase family, helical bundle domain Ami103574_RS07310 PF00591 Glycosyl transferase family, a/b domain Ami103574_RS07315 PF00218 Indole-3-glycerol phosphate synthase Ami103574_RS07320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Ami103574_RS07325 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS07330 PF00290 Tryptophan synthase alpha chain Ami103574_RS07345 PF00005 ABC transporter Ami103574_RS07350 PF02687 FtsX-like permease family Ami103574_RS07350 PF18075 FtsX extracellular domain Ami103574_RS07355 PF01551 Peptidase family M23 Ami103574_RS07355 PF04225 Opacity-associated protein A LysM-like domain Ami103574_RS07360 PF01368 DHH family Ami103574_RS07360 PF17768 RecJ OB domain Ami103574_RS07360 PF02272 DHHA1 domain Ami103574_RS07360 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Ami103574_RS07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS07365 PF03466 LysR substrate binding domain Ami103574_RS07370 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami103574_RS07375 PF03572 Peptidase family S41 Ami103574_RS07375 PF17820 PDZ domain Ami103574_RS07375 PF01471 Putative peptidoglycan binding domain Ami103574_RS07380 PF06580 Histidine kinase Ami103574_RS07380 PF00672 HAMP domain Ami103574_RS07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS07380 PF02743 Cache domain Ami103574_RS07385 PF12833 Helix-turn-helix domain Ami103574_RS07390 PF00936 BMC domain Ami103574_RS07395 PF02286 Dehydratase large subunit Ami103574_RS07400 PF02288 Dehydratase medium subunit Ami103574_RS07405 PF02287 Dehydratase small subunit Ami103574_RS07410 PF18427 DD-reactivating factor swiveling domain Ami103574_RS07410 PF08841 Diol dehydratase reactivase ATPase-like domain Ami103574_RS07415 PF02288 Dehydratase medium subunit Ami103574_RS07425 PF00936 BMC domain Ami103574_RS07430 PF06130 Phosphate propanoyltransferase Ami103574_RS07440 PF03319 Ethanolamine utilisation protein EutN/carboxysome Ami103574_RS07445 PF01923 Cobalamin adenosyltransferase Ami103574_RS07450 PF00171 Aldehyde dehydrogenase family Ami103574_RS07455 PF13237 4Fe-4S dicluster domain Ami103574_RS07455 PF13375 RnfC Barrel sandwich hybrid domain Ami103574_RS07455 PF10531 SLBB domain Ami103574_RS07455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami103574_RS07470 PF00936 BMC domain Ami103574_RS07475 PF10662 Ethanolamine utilisation - propanediol utilisation Ami103574_RS07480 PF01636 Phosphotransferase enzyme family Ami103574_RS07485 PF01371 Trp repressor protein Ami103574_RS07495 PF02631 RecX family Ami103574_RS07510 PF00133 tRNA synthetases class I (I, L, M and V) Ami103574_RS07510 PF08264 Anticodon-binding domain of tRNA Ami103574_RS07515 PF04055 Radical SAM superfamily Ami103574_RS07525 PF00892 EamA-like transporter family Ami103574_RS07530 PF00293 NUDIX domain Ami103574_RS07535 PF00188 Cysteine-rich secretory protein family Ami103574_RS07560 PF08497 Radical SAM N-terminal Ami103574_RS07560 PF04055 Radical SAM superfamily Ami103574_RS07560 PF11842 Domain of unknown function (DUF3362) Ami103574_RS07565 PF01555 DNA methylase Ami103574_RS07570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami103574_RS07570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami103574_RS07575 PF00005 ABC transporter Ami103574_RS07575 PF00664 ABC transporter transmembrane region Ami103574_RS07580 PF12627 Probable RNA and SrmB- binding site of polymerase A Ami103574_RS07580 PF01966 HD domain Ami103574_RS07580 PF01743 Poly A polymerase head domain Ami103574_RS07590 PF02698 DUF218 domain Ami103574_RS07600 PF00395 S-layer homology domain Ami103574_RS07615 PF03853 YjeF-related protein N-terminus Ami103574_RS07615 PF01256 Carbohydrate kinase Ami103574_RS07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS07635 PF03466 LysR substrate binding domain Ami103574_RS07650 PF00704 Glycosyl hydrolases family 18 Ami103574_RS07660 PF01743 Poly A polymerase head domain Ami103574_RS07660 PF13735 tRNA nucleotidyltransferase domain 2 putative Ami103574_RS07660 PF12627 Probable RNA and SrmB- binding site of polymerase A Ami103574_RS07675 PF02583 Metal-sensitive transcriptional repressor Ami103574_RS07680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ami103574_RS07685 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS07690 PF12911 N-terminal TM domain of oligopeptide transport permease C Ami103574_RS07695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami103574_RS07695 PF00005 ABC transporter Ami103574_RS07700 PF00005 ABC transporter Ami103574_RS07705 PF00361 Proton-conducting membrane transporter Ami103574_RS07705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Ami103574_RS07705 PF13244 Domain of unknown function (DUF4040) Ami103574_RS07715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Ami103574_RS07725 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Ami103574_RS07740 PF02492 CobW/HypB/UreG, nucleotide-binding domain Ami103574_RS07745 PF00708 Acylphosphatase Ami103574_RS07745 PF17788 HypF Kae1-like domain Ami103574_RS07745 PF01300 Telomere recombination Ami103574_RS07745 PF07503 HypF finger Ami103574_RS07750 PF01455 HupF/HypC family Ami103574_RS07755 PF01924 Hydrogenase formation hypA family Ami103574_RS07760 PF02769 AIR synthase related protein, C-terminal domain Ami103574_RS07760 PF00586 AIR synthase related protein, N-terminal domain Ami103574_RS07780 PF03575 Peptidase family S51 Ami103574_RS07790 PF06445 GyrI-like small molecule binding domain Ami103574_RS07790 PF13411 MerR HTH family regulatory protein Ami103574_RS07800 PF04452 RNA methyltransferase Ami103574_RS07805 PF01880 Desulfoferrodoxin Ami103574_RS07805 PF06397 Desulfoferrodoxin, N-terminal domain Ami103574_RS07810 PF05036 Sporulation related domain Ami103574_RS07810 PF01520 N-acetylmuramoyl-L-alanine amidase Ami103574_RS07815 PF01522 Polysaccharide deacetylase Ami103574_RS07845 PF04055 Radical SAM superfamily Ami103574_RS07845 PF01938 TRAM domain Ami103574_RS07845 PF00919 Uncharacterized protein family UPF0004 Ami103574_RS07850 PF01230 HIT domain Ami103574_RS07855 PF01165 Ribosomal protein S21 Ami103574_RS07865 PF02082 Transcriptional regulator Ami103574_RS07870 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS07880 PF06898 Putative stage IV sporulation protein YqfD Ami103574_RS07885 PF02562 PhoH-like protein Ami103574_RS07890 PF02130 Uncharacterized protein family UPF0054 Ami103574_RS07895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ami103574_RS07900 PF01926 50S ribosome-binding GTPase Ami103574_RS07900 PF07650 KH domain Ami103574_RS07910 PF00889 Elongation factor TS Ami103574_RS07915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami103574_RS07915 PF03129 Anticodon binding domain Ami103574_RS07920 PF02896 PEP-utilising enzyme, TIM barrel domain Ami103574_RS07920 PF00391 PEP-utilising enzyme, mobile domain Ami103574_RS07920 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ami103574_RS07925 PF00072 Response regulator receiver domain Ami103574_RS07925 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS07930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS07930 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS07935 PF04294 VanW like protein Ami103574_RS07940 PF01820 D-ala D-ala ligase N-terminus Ami103574_RS07940 PF07478 D-ala D-ala ligase C-terminus Ami103574_RS07945 PF02557 D-alanyl-D-alanine carboxypeptidase Ami103574_RS07955 PF00574 Clp protease Ami103574_RS07965 PF02690 Na+/Pi-cotransporter Ami103574_RS07970 PF00072 Response regulator receiver domain Ami103574_RS07970 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS07975 PF16736 Single Cache-like Ami103574_RS07975 PF00989 PAS fold Ami103574_RS07975 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS07980 PF00999 Sodium/hydrogen exchanger family Ami103574_RS07980 PF02254 TrkA-N domain Ami103574_RS07985 PF00437 Type II/IV secretion system protein Ami103574_RS08025 PF00989 PAS fold Ami103574_RS08025 PF00158 Sigma-54 interaction domain Ami103574_RS08025 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS08030 PF07690 Major Facilitator Superfamily Ami103574_RS08035 PF04199 Putative cyclase Ami103574_RS08040 PF05853 beta-keto acid cleavage enzyme Ami103574_RS08055 PF12002 MgsA AAA+ ATPase C terminal Ami103574_RS08055 PF16193 AAA C-terminal domain Ami103574_RS08055 PF00004 ATPase family associated with various cellular activities (AAA) Ami103574_RS08060 PF02401 LytB protein Ami103574_RS08060 PF00575 S1 RNA binding domain Ami103574_RS08065 PF01202 Shikimate kinase Ami103574_RS08070 PF13476 AAA domain Ami103574_RS08075 PF01316 Arginine repressor, DNA binding domain Ami103574_RS08075 PF02863 Arginine repressor, C-terminal domain Ami103574_RS08080 PF02075 Crossover junction endodeoxyribonuclease RuvC Ami103574_RS08085 PF07499 RuvA, C-terminal domain Ami103574_RS08085 PF01330 RuvA N terminal domain Ami103574_RS08090 PF05496 Holliday junction DNA helicase RuvB P-loop domain Ami103574_RS08090 PF05491 RuvB C-terminal winged helix domain Ami103574_RS08090 PF17864 RuvB AAA lid domain Ami103574_RS08095 PF08486 Stage II sporulation protein Ami103574_RS08100 PF02547 Queuosine biosynthesis protein Ami103574_RS08105 PF01702 Queuine tRNA-ribosyltransferase Ami103574_RS08110 PF05958 tRNA (Uracil-5-)-methyltransferase Ami103574_RS08165 PF01965 DJ-1/PfpI family Ami103574_RS08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS08175 PF03466 LysR substrate binding domain Ami103574_RS08180 PF07690 Major Facilitator Superfamily Ami103574_RS08185 PF03880 DbpA RNA binding domain Ami103574_RS08185 PF00271 Helicase conserved C-terminal domain Ami103574_RS08185 PF00270 DEAD/DEAH box helicase Ami103574_RS08205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Ami103574_RS08205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Ami103574_RS08210 PF00892 EamA-like transporter family Ami103574_RS08215 PF12833 Helix-turn-helix domain Ami103574_RS08215 PF02805 Metal binding domain of Ada Ami103574_RS08225 PF01037 Lrp/AsnC ligand binding domain Ami103574_RS08235 PF06445 GyrI-like small molecule binding domain Ami103574_RS08235 PF12833 Helix-turn-helix domain Ami103574_RS08240 PF13732 Domain of unknown function (DUF4162) Ami103574_RS08240 PF00005 ABC transporter Ami103574_RS08250 PF05192 MutS domain III Ami103574_RS08250 PF05190 MutS family domain IV Ami103574_RS08250 PF00488 MutS domain V Ami103574_RS08250 PF05188 MutS domain II Ami103574_RS08250 PF01624 MutS domain I Ami103574_RS08265 PF01551 Peptidase family M23 Ami103574_RS08265 PF04225 Opacity-associated protein A LysM-like domain Ami103574_RS08270 PF00395 S-layer homology domain Ami103574_RS08270 PF02018 Carbohydrate binding domain Ami103574_RS08270 PF06452 Carbohydrate family 9 binding domain-like Ami103574_RS08270 PF00331 Glycosyl hydrolase family 10 Ami103574_RS08280 PF01740 STAS domain Ami103574_RS08285 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain Ami103574_RS08285 PF07228 Stage II sporulation protein E (SpoIIE) Ami103574_RS08295 PF03412 Peptidase C39 family Ami103574_RS08295 PF00005 ABC transporter Ami103574_RS08295 PF00664 ABC transporter transmembrane region Ami103574_RS08300 PF03412 Peptidase C39 family Ami103574_RS08300 PF00005 ABC transporter Ami103574_RS08300 PF00664 ABC transporter transmembrane region Ami103574_RS08310 PF13411 MerR HTH family regulatory protein Ami103574_RS08315 PF01042 Endoribonuclease L-PSP Ami103574_RS08330 PF03169 OPT oligopeptide transporter protein Ami103574_RS08335 PF07687 Peptidase dimerisation domain Ami103574_RS08335 PF01546 Peptidase family M20/M25/M40 Ami103574_RS08350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ami103574_RS08350 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS08355 PF06580 Histidine kinase Ami103574_RS08360 PF04397 LytTr DNA-binding domain Ami103574_RS08360 PF00072 Response regulator receiver domain Ami103574_RS08370 PF00892 EamA-like transporter family Ami103574_RS08375 PF02311 AraC-like ligand binding domain Ami103574_RS08375 PF12833 Helix-turn-helix domain Ami103574_RS08395 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Ami103574_RS08400 PF05726 Pirin C-terminal cupin domain Ami103574_RS08400 PF02678 Pirin Ami103574_RS08405 PF03193 RsgA GTPase Ami103574_RS08420 PF00491 Arginase family Ami103574_RS08425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS08425 PF03466 LysR substrate binding domain Ami103574_RS08450 PF00730 HhH-GPD superfamily base excision DNA repair protein Ami103574_RS08450 PF14815 NUDIX domain Ami103574_RS08455 PF17202 Single cache domain 3 Ami103574_RS08455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS08455 PF00672 HAMP domain Ami103574_RS08460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS08460 PF02203 Tar ligand binding domain homologue Ami103574_RS08460 PF00672 HAMP domain Ami103574_RS08475 PF00583 Acetyltransferase (GNAT) family Ami103574_RS08480 PF13597 Anaerobic ribonucleoside-triphosphate reductase Ami103574_RS08480 PF03477 ATP cone domain Ami103574_RS08485 PF04055 Radical SAM superfamily Ami103574_RS08490 PF00830 Ribosomal L28 family Ami103574_RS08505 PF17191 RecG wedge domain Ami103574_RS08505 PF00270 DEAD/DEAH box helicase Ami103574_RS08505 PF00271 Helicase conserved C-terminal domain Ami103574_RS08510 PF00269 Small, acid-soluble spore proteins, alpha/beta type Ami103574_RS08520 PF01467 Cytidylyltransferase-like Ami103574_RS08535 PF05636 HIGH Nucleotidyl Transferase Ami103574_RS08540 PF00871 Acetokinase family Ami103574_RS08545 PF01783 Ribosomal L32p protein family Ami103574_RS08560 PF00701 Dihydrodipicolinate synthetase family Ami103574_RS08565 PF02774 Semialdehyde dehydrogenase, dimerisation domain Ami103574_RS08565 PF01118 Semialdehyde dehydrogenase, NAD binding domain Ami103574_RS08570 PF01580 FtsK/SpoIIIE family Ami103574_RS08570 PF09397 Ftsk gamma domain Ami103574_RS08570 PF17854 FtsK alpha domain Ami103574_RS08580 PF00919 Uncharacterized protein family UPF0004 Ami103574_RS08580 PF18693 TRAM domain Ami103574_RS08580 PF04055 Radical SAM superfamily Ami103574_RS08585 PF01066 CDP-alcohol phosphatidyltransferase Ami103574_RS08590 PF00994 Probable molybdopterin binding domain Ami103574_RS08590 PF02464 Competence-damaged protein Ami103574_RS08590 PF18146 Damage-inducible protein CinA KH domain Ami103574_RS08595 PF00154 recA bacterial DNA recombination protein Ami103574_RS08600 PF00829 Ribosomal prokaryotic L21 protein Ami103574_RS08605 PF01016 Ribosomal L27 protein Ami103574_RS08610 PF01926 50S ribosome-binding GTPase Ami103574_RS08610 PF01018 GTP1/OBG Ami103574_RS08610 PF09269 Domain of unknown function (DUF1967) Ami103574_RS08625 PF06969 HemN C-terminal domain Ami103574_RS08625 PF04055 Radical SAM superfamily Ami103574_RS08635 PF10531 SLBB domain Ami103574_RS08645 PF05580 SpoIVB peptidase S55 Ami103574_RS08645 PF17820 PDZ domain Ami103574_RS08650 PF00072 Response regulator receiver domain Ami103574_RS08650 PF08769 Sporulation initiation factor Spo0A C terminal Ami103574_RS08655 PF00239 Resolvase, N terminal domain Ami103574_RS08655 PF18010 Cry35Ab1 HTH C-terminal domain Ami103574_RS08660 PF05979 Bacterial protein of unknown function (DUF896) Ami103574_RS08670 PF00266 Aminotransferase class-V Ami103574_RS08675 PF01592 NifU-like N terminal domain Ami103574_RS08705 PF01029 NusB family Ami103574_RS08710 PF00814 Glycoprotease family Ami103574_RS08715 PF02601 Exonuclease VII, large subunit Ami103574_RS08715 PF13742 OB-fold nucleic acid binding domain Ami103574_RS08720 PF02609 Exonuclease VII small subunit Ami103574_RS08725 PF00348 Polyprenyl synthetase Ami103574_RS08730 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Ami103574_RS08730 PF02779 Transketolase, pyrimidine binding domain Ami103574_RS08730 PF02780 Transketolase, C-terminal domain Ami103574_RS08735 PF01728 FtsJ-like methyltransferase Ami103574_RS08735 PF01479 S4 domain Ami103574_RS08740 PF00155 Aminotransferase class I and II Ami103574_RS08745 PF05188 MutS domain II Ami103574_RS08745 PF00488 MutS domain V Ami103574_RS08745 PF05192 MutS domain III Ami103574_RS08745 PF01624 MutS domain I Ami103574_RS08745 PF05190 MutS family domain IV Ami103574_RS08750 PF01119 DNA mismatch repair protein, C-terminal domain Ami103574_RS08750 PF08676 MutL C terminal dimerisation domain Ami103574_RS08760 PF02899 Phage integrase, N-terminal SAM-like domain Ami103574_RS08760 PF00589 Phage integrase family Ami103574_RS08765 PF06838 Methionine gamma-lyase Ami103574_RS08770 PF09335 SNARE associated Golgi protein Ami103574_RS08785 PF00578 AhpC/TSA family Ami103574_RS08790 PF01022 Bacterial regulatory protein, arsR family Ami103574_RS08795 PF06953 Arsenical resistance operon trans-acting repressor ArsD Ami103574_RS08800 PF02374 Anion-transporting ATPase Ami103574_RS08840 PF00905 Penicillin binding protein transpeptidase domain Ami103574_RS08840 PF05569 BlaR1 peptidase M56 Ami103574_RS08855 PF03652 Holliday junction resolvase Ami103574_RS08860 PF06135 IreB regulatory phosphoprotein Ami103574_RS08865 PF02272 DHHA1 domain Ami103574_RS08865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ami103574_RS08865 PF01411 tRNA synthetases class II (A) Ami103574_RS08875 PF06686 Stage III sporulation protein AC/AD protein family Ami103574_RS08895 PF01595 Cyclin M transmembrane N-terminal domain Ami103574_RS08895 PF03471 Transporter associated domain Ami103574_RS08895 PF00571 CBS domain Ami103574_RS08905 PF01596 O-methyltransferase Ami103574_RS08910 PF02618 YceG-like family Ami103574_RS08915 PF08207 Elongation factor P (EF-P) KOW-like domain Ami103574_RS08915 PF01132 Elongation factor P (EF-P) OB domain Ami103574_RS08915 PF09285 Elongation factor P, C-terminal Ami103574_RS08920 PF06133 Control of competence regulator ComK, YlbF/YmcA Ami103574_RS08925 PF17770 Ribonuclease J C-terminal domain Ami103574_RS08925 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Ami103574_RS08925 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS08930 PF08264 Anticodon-binding domain of tRNA Ami103574_RS08930 PF00133 tRNA synthetases class I (I, L, M and V) Ami103574_RS08930 PF09334 tRNA synthetases class I (M) Ami103574_RS08930 PF13603 Leucyl-tRNA synthetase, Domain 2 Ami103574_RS08940 PF01966 HD domain Ami103574_RS08945 PF01467 Cytidylyltransferase-like Ami103574_RS08950 PF02938 GAD domain Ami103574_RS08950 PF00152 tRNA synthetases class II (D, K and N) Ami103574_RS08950 PF01336 OB-fold nucleic acid binding domain Ami103574_RS08955 PF03129 Anticodon binding domain Ami103574_RS08955 PF13393 Histidyl-tRNA synthetase Ami103574_RS08960 PF04055 Radical SAM superfamily Ami103574_RS08965 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS08970 PF02580 D-Tyr-tRNA(Tyr) deacylase Ami103574_RS08975 PF02824 TGS domain Ami103574_RS08975 PF04607 Region found in RelA / SpoT proteins Ami103574_RS08975 PF13291 ACT domain Ami103574_RS08980 PF07549 SecD/SecF GG Motif Ami103574_RS08980 PF02355 Protein export membrane protein Ami103574_RS08990 PF02699 Preprotein translocase subunit Ami103574_RS09010 PF01121 Dephospho-CoA kinase Ami103574_RS09015 PF00476 DNA polymerase family A Ami103574_RS09015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Ami103574_RS09015 PF01367 5'-3' exonuclease, C-terminal SAM fold Ami103574_RS09025 PF08281 Sigma-70, region 4 Ami103574_RS09025 PF04542 Sigma-70 region 2 Ami103574_RS09030 PF02811 PHP domain Ami103574_RS09035 PF00571 CBS domain Ami103574_RS09035 PF01595 Cyclin M transmembrane N-terminal domain Ami103574_RS09035 PF03471 Transporter associated domain Ami103574_RS09040 PF13411 MerR HTH family regulatory protein Ami103574_RS09045 PF00005 ABC transporter Ami103574_RS09055 PF03073 TspO/MBR family Ami103574_RS09060 PF01797 Transposase IS200 like Ami103574_RS09065 PF03576 Peptidase family S58 Ami103574_RS09085 PF01709 Transcriptional regulator Ami103574_RS09090 PF01869 BadF/BadG/BcrA/BcrD ATPase family Ami103574_RS09110 PF01784 NIF3 (NGG1p interacting factor 3) Ami103574_RS09115 PF04816 tRNA (adenine(22)-N(1))-methyltransferase Ami103574_RS09120 PF00140 Sigma-70 factor, region 1.2 Ami103574_RS09120 PF04539 Sigma-70 region 3 Ami103574_RS09120 PF04545 Sigma-70, region 4 Ami103574_RS09120 PF04542 Sigma-70 region 2 Ami103574_RS09120 PF03979 Sigma-70 factor, region 1.1 Ami103574_RS09125 PF01807 CHC2 zinc finger Ami103574_RS09125 PF10410 DnaB-helicase binding domain of primase Ami103574_RS09125 PF08275 DNA primase catalytic core, N-terminal domain Ami103574_RS09130 PF01966 HD domain Ami103574_RS09130 PF13286 Phosphohydrolase-associated domain Ami103574_RS09135 PF01384 Phosphate transporter family Ami103574_RS09150 PF00199 Catalase Ami103574_RS09150 PF06628 Catalase-related immune-responsive Ami103574_RS09150 PF18011 C-terminal domain found in long catalases Ami103574_RS09155 PF02570 Precorrin-8X methylmutase Ami103574_RS09160 PF07685 CobB/CobQ-like glutamine amidotransferase domain Ami103574_RS09165 PF00155 Aminotransferase class I and II Ami103574_RS09170 PF03186 CobD/Cbib protein Ami103574_RS09175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ami103574_RS09175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami103574_RS09180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami103574_RS09185 PF01888 CbiD Ami103574_RS09190 PF07685 CobB/CobQ-like glutamine amidotransferase domain Ami103574_RS09190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ami103574_RS09195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami103574_RS09200 PF11761 Cobalamin biosynthesis central region Ami103574_RS09200 PF01890 Cobalamin synthesis G C-terminus Ami103574_RS09200 PF11760 Cobalamin synthesis G N-terminal Ami103574_RS09210 PF05193 Peptidase M16 inactive domain Ami103574_RS09210 PF00675 Insulinase (Peptidase family M16) Ami103574_RS09215 PF01522 Polysaccharide deacetylase Ami103574_RS09220 PF00331 Glycosyl hydrolase family 10 Ami103574_RS09220 PF06452 Carbohydrate family 9 binding domain-like Ami103574_RS09220 PF00395 S-layer homology domain Ami103574_RS09220 PF02018 Carbohydrate binding domain Ami103574_RS09230 PF03062 MBOAT, membrane-bound O-acyltransferase family Ami103574_RS09260 PF01209 ubiE/COQ5 methyltransferase family Ami103574_RS09265 PF02899 Phage integrase, N-terminal SAM-like domain Ami103574_RS09265 PF00589 Phage integrase family Ami103574_RS09270 PF00916 Sulfate permease family Ami103574_RS09270 PF01740 STAS domain Ami103574_RS09290 PF15975 Flotillin Ami103574_RS09290 PF01145 SPFH domain / Band 7 family Ami103574_RS09300 PF09924 Uncharacterised conserved protein (DUF2156) Ami103574_RS09325 PF00155 Aminotransferase class I and II Ami103574_RS09335 PF02673 Bacitracin resistance protein BacA Ami103574_RS09340 PF02535 ZIP Zinc transporter Ami103574_RS09350 PF00557 Metallopeptidase family M24 Ami103574_RS09350 PF01321 Creatinase/Prolidase N-terminal domain Ami103574_RS09365 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS09365 PF16658 Class II release factor RF3, C-terminal domain Ami103574_RS09365 PF03144 Elongation factor Tu domain 2 Ami103574_RS09370 PF00072 Response regulator receiver domain Ami103574_RS09375 PF00082 Subtilase family Ami103574_RS09380 PF13476 AAA domain Ami103574_RS09385 PF00149 Calcineurin-like phosphoesterase Ami103574_RS09385 PF12320 Type 5 capsule protein repressor C-terminal domain Ami103574_RS09390 PF02638 Glycosyl hydrolase-like 10 Ami103574_RS09395 PF00578 AhpC/TSA family Ami103574_RS09400 PF00795 Carbon-nitrogen hydrolase Ami103574_RS09400 PF00583 Acetyltransferase (GNAT) family Ami103574_RS09415 PF01966 HD domain Ami103574_RS09430 PF04260 Protein of unknown function (DUF436) Ami103574_RS09440 PF03006 Haemolysin-III related Ami103574_RS09465 PF03063 Prismane/CO dehydrogenase family Ami103574_RS09470 PF02675 S-adenosylmethionine decarboxylase Ami103574_RS09475 PF17284 Spermidine synthase tetramerisation domain Ami103574_RS09490 PF00501 AMP-binding enzyme Ami103574_RS09495 PF01048 Phosphorylase superfamily Ami103574_RS09500 PF12729 Four helix bundle sensory module for signal transduction Ami103574_RS09500 PF00672 HAMP domain Ami103574_RS09500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS09505 PF00936 BMC domain Ami103574_RS09510 PF06130 Phosphate propanoyltransferase Ami103574_RS09515 PF00171 Aldehyde dehydrogenase family Ami103574_RS09515 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS09525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami103574_RS09525 PF13237 4Fe-4S dicluster domain Ami103574_RS09525 PF13375 RnfC Barrel sandwich hybrid domain Ami103574_RS09525 PF10531 SLBB domain Ami103574_RS09530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami103574_RS09530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami103574_RS09535 PF06100 MCRA family Ami103574_RS09540 PF00226 DnaJ domain Ami103574_RS09540 PF01556 DnaJ C terminal domain Ami103574_RS09540 PF00684 DnaJ central domain Ami103574_RS09545 PF00012 Hsp70 protein Ami103574_RS09550 PF01025 GrpE Ami103574_RS09555 PF01628 HrcA protein C terminal domain Ami103574_RS09560 PF00005 ABC transporter Ami103574_RS09565 PF00005 ABC transporter Ami103574_RS09565 PF12399 Branched-chain amino acid ATP-binding cassette transporter Ami103574_RS09570 PF02653 Branched-chain amino acid transport system / permease component Ami103574_RS09570 PF11862 Domain of unknown function (DUF3382) Ami103574_RS09575 PF02653 Branched-chain amino acid transport system / permease component Ami103574_RS09580 PF13458 Periplasmic binding protein Ami103574_RS09595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ami103574_RS09595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ami103574_RS09605 PF13443 Cro/C1-type HTH DNA-binding domain Ami103574_RS09620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Ami103574_RS09620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Ami103574_RS09630 PF06969 HemN C-terminal domain Ami103574_RS09630 PF04055 Radical SAM superfamily Ami103574_RS09645 PF06421 GTP-binding protein LepA C-terminus Ami103574_RS09645 PF03144 Elongation factor Tu domain 2 Ami103574_RS09645 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS09645 PF00679 Elongation factor G C-terminus Ami103574_RS09660 PF03418 Germination protease Ami103574_RS09665 PF01649 Ribosomal protein S20 Ami103574_RS09670 PF02311 AraC-like ligand binding domain Ami103574_RS09670 PF12833 Helix-turn-helix domain Ami103574_RS09675 PF00696 Amino acid kinase family Ami103574_RS09680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ami103574_RS09680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ami103574_RS09690 PF17853 GGDEF-like domain Ami103574_RS09690 PF13556 PucR C-terminal helix-turn-helix domain Ami103574_RS09690 PF05651 Putative sugar diacid recognition Ami103574_RS09695 PF13520 Amino acid permease Ami103574_RS09700 PF03447 Homoserine dehydrogenase, NAD binding domain Ami103574_RS09700 PF00742 Homoserine dehydrogenase Ami103574_RS09700 PF01842 ACT domain Ami103574_RS09710 PF00892 EamA-like transporter family Ami103574_RS09725 PF01432 Peptidase family M3 Ami103574_RS09725 PF08439 Oligopeptidase F Ami103574_RS09730 PF01513 ATP-NAD kinase Ami103574_RS09735 PF00849 RNA pseudouridylate synthase Ami103574_RS09735 PF01479 S4 domain Ami103574_RS09740 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS09745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ami103574_RS09785 PF00535 Glycosyl transferase family 2 Ami103574_RS09850 PF04239 Protein of unknown function (DUF421) Ami103574_RS09860 PF12822 ECF transporter, substrate-specific component Ami103574_RS09865 PF01479 S4 domain Ami103574_RS09870 PF08386 TAP-like protein Ami103574_RS09870 PF00561 alpha/beta hydrolase fold Ami103574_RS09875 PF00216 Bacterial DNA-binding protein Ami103574_RS09880 PF03819 MazG nucleotide pyrophosphohydrolase domain Ami103574_RS09890 PF01979 Amidohydrolase family Ami103574_RS09895 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ami103574_RS09895 PF15714 Stage V sporulation protein T C-terminal, transcription factor Ami103574_RS09900 PF17757 UvrB interaction domain Ami103574_RS09900 PF00271 Helicase conserved C-terminal domain Ami103574_RS09900 PF00270 DEAD/DEAH box helicase Ami103574_RS09900 PF02559 CarD-like/TRCF domain Ami103574_RS09900 PF03461 TRCF domain Ami103574_RS09905 PF01195 Peptidyl-tRNA hydrolase Ami103574_RS09910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Ami103574_RS09910 PF14572 Phosphoribosyl synthetase-associated domain Ami103574_RS09915 PF00132 Bacterial transferase hexapeptide (six repeats) Ami103574_RS09915 PF00483 Nucleotidyl transferase Ami103574_RS09920 PF01225 Mur ligase family, catalytic domain Ami103574_RS09920 PF08245 Mur ligase middle domain Ami103574_RS09920 PF02875 Mur ligase family, glutamate ligase domain Ami103574_RS09925 PF09182 Bacterial purine repressor, N-terminal Ami103574_RS09925 PF00156 Phosphoribosyl transferase domain Ami103574_RS09930 PF04026 SpoVG Ami103574_RS09935 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS09940 PF00085 Thioredoxin Ami103574_RS09955 PF01464 Transglycosylase SLT domain Ami103574_RS09960 PF00860 Permease family Ami103574_RS09965 PF01098 Cell cycle protein Ami103574_RS09970 PF00905 Penicillin binding protein transpeptidase domain Ami103574_RS09985 PF00156 Phosphoribosyl transferase domain Ami103574_RS09995 PF04542 Sigma-70 region 2 Ami103574_RS09995 PF08281 Sigma-70, region 4 Ami103574_RS10000 PF00578 AhpC/TSA family Ami103574_RS10000 PF10417 C-terminal domain of 1-Cys peroxiredoxin Ami103574_RS10005 PF03323 Bacillus/Clostridium GerA spore germination protein Ami103574_RS10015 PF08279 HTH domain Ami103574_RS10015 PF13280 WYL domain Ami103574_RS10020 PF01180 Dihydroorotate dehydrogenase Ami103574_RS10025 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ami103574_RS10030 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Ami103574_RS10035 PF01979 Amidohydrolase family Ami103574_RS10040 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Ami103574_RS10040 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Ami103574_RS10045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ami103574_RS10045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ami103574_RS10050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ami103574_RS10050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ami103574_RS10055 PF00005 ABC transporter Ami103574_RS10070 PF02903 Alpha amylase, N-terminal ig-like domain Ami103574_RS10070 PF00395 S-layer homology domain Ami103574_RS10070 PF00128 Alpha amylase, catalytic domain Ami103574_RS10095 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS10100 PF00005 ABC transporter Ami103574_RS10110 PF01276 Orn/Lys/Arg decarboxylase, major domain Ami103574_RS10110 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Ami103574_RS10115 PF01546 Peptidase family M20/M25/M40 Ami103574_RS10115 PF07687 Peptidase dimerisation domain Ami103574_RS10125 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS10125 PF00155 Aminotransferase class I and II Ami103574_RS10145 PF01641 SelR domain Ami103574_RS10145 PF01625 Peptide methionine sulfoxide reductase Ami103574_RS10155 PF00005 ABC transporter Ami103574_RS10185 PF00672 HAMP domain Ami103574_RS10185 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS10190 PF00072 Response regulator receiver domain Ami103574_RS10190 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS10195 PF00403 Heavy-metal-associated domain Ami103574_RS10205 PF00403 Heavy-metal-associated domain Ami103574_RS10215 PF00403 Heavy-metal-associated domain Ami103574_RS10225 PF00005 ABC transporter Ami103574_RS10230 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS10230 PF00989 PAS fold Ami103574_RS10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS10235 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS10235 PF00072 Response regulator receiver domain Ami103574_RS10260 PF13673 Acetyltransferase (GNAT) domain Ami103574_RS10310 PF05525 Branched-chain amino acid transport protein Ami103574_RS10325 PF00933 Glycosyl hydrolase family 3 N terminal domain Ami103574_RS10325 PF01915 Glycosyl hydrolase family 3 C-terminal domain Ami103574_RS10335 PF07739 TipAS antibiotic-recognition domain Ami103574_RS10335 PF13411 MerR HTH family regulatory protein Ami103574_RS10345 PF12802 MarR family Ami103574_RS10360 PF13411 MerR HTH family regulatory protein Ami103574_RS10370 PF00005 ABC transporter Ami103574_RS10375 PF01032 FecCD transport family Ami103574_RS10380 PF01032 FecCD transport family Ami103574_RS10390 PF00395 S-layer homology domain Ami103574_RS10390 PF02903 Alpha amylase, N-terminal ig-like domain Ami103574_RS10390 PF00128 Alpha amylase, catalytic domain Ami103574_RS10405 PF00440 Bacterial regulatory proteins, tetR family Ami103574_RS10425 PF00027 Cyclic nucleotide-binding domain Ami103574_RS10435 PF05857 TraX protein Ami103574_RS10440 PF10706 Aminoglycoside-2''-adenylyltransferase Ami103574_RS10460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami103574_RS10465 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ami103574_RS10465 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ami103574_RS10475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ami103574_RS10495 PF17746 SfsA N-terminal OB domain Ami103574_RS10495 PF03749 Sugar fermentation stimulation protein RE domain Ami103574_RS10500 PF02581 Thiamine monophosphate synthase Ami103574_RS10500 PF08543 Phosphomethylpyrimidine kinase Ami103574_RS10505 PF13419 Haloacid dehalogenase-like hydrolase Ami103574_RS10510 PF02581 Thiamine monophosphate synthase Ami103574_RS10515 PF02110 Hydroxyethylthiazole kinase family Ami103574_RS10520 PF01964 Radical SAM ThiC family Ami103574_RS10525 PF07943 Penicillin-binding protein 5, C-terminal domain Ami103574_RS10525 PF00768 D-alanyl-D-alanine carboxypeptidase Ami103574_RS10535 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS10535 PF00072 Response regulator receiver domain Ami103574_RS10540 PF13493 Domain of unknown function (DUF4118) Ami103574_RS10540 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS10540 PF02702 Osmosensitive K+ channel His kinase sensor domain Ami103574_RS10540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS10560 PF16326 ABC transporter C-terminal domain Ami103574_RS10560 PF16326 ABC transporter C-terminal domain Ami103574_RS10560 PF00005 ABC transporter Ami103574_RS10560 PF12848 ABC transporter Ami103574_RS10560 PF12848 ABC transporter Ami103574_RS10560 PF00005 ABC transporter Ami103574_RS10565 PF00258 Flavodoxin Ami103574_RS10565 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS10570 PF02770 Acyl-CoA dehydrogenase, middle domain Ami103574_RS10570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Ami103574_RS10570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Ami103574_RS10585 PF00324 Amino acid permease Ami103574_RS10590 PF08664 YcbB domain Ami103574_RS10590 PF00072 Response regulator receiver domain Ami103574_RS10595 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS10595 PF18698 Histidine kinase sensor domain Ami103574_RS10595 PF00989 PAS fold Ami103574_RS10595 PF00672 HAMP domain Ami103574_RS10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS10600 PF00324 Amino acid permease Ami103574_RS10605 PF00171 Aldehyde dehydrogenase family Ami103574_RS10610 PF02875 Mur ligase family, glutamate ligase domain Ami103574_RS10610 PF08245 Mur ligase middle domain Ami103574_RS10645 PF00395 S-layer homology domain Ami103574_RS10655 PF01381 Helix-turn-helix Ami103574_RS10660 PF01381 Helix-turn-helix Ami103574_RS10670 PF01381 Helix-turn-helix Ami103574_RS10675 PF01966 HD domain Ami103574_RS10675 PF13286 Phosphohydrolase-associated domain Ami103574_RS10685 PF00817 impB/mucB/samB family Ami103574_RS10685 PF11799 impB/mucB/samB family C-terminal domain Ami103574_RS10745 PF04002 RadC-like JAB domain Ami103574_RS10780 PF00437 Type II/IV secretion system protein Ami103574_RS10905 PF00436 Single-strand binding protein family Ami103574_RS10930 PF17762 HTH domain found in ParB protein Ami103574_RS10930 PF02195 ParB-like nuclease domain Ami103574_RS10935 PF13614 AAA domain Ami103574_RS10960 PF00082 Subtilase family Ami103574_RS10965 PF00885 6,7-dimethyl-8-ribityllumazine synthase Ami103574_RS10970 PF00925 GTP cyclohydrolase II Ami103574_RS10970 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Ami103574_RS10975 PF00677 Lumazine binding domain Ami103574_RS10980 PF01872 RibD C-terminal domain Ami103574_RS10980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ami103574_RS10990 PF00390 Malic enzyme, N-terminal domain Ami103574_RS10990 PF03949 Malic enzyme, NAD binding domain Ami103574_RS10995 PF00206 Lyase Ami103574_RS10995 PF10415 Fumarase C C-terminus Ami103574_RS11000 PF03466 LysR substrate binding domain Ami103574_RS11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS11010 PF03576 Peptidase family S58 Ami103574_RS11015 PF13520 Amino acid permease Ami103574_RS11020 PF07930 D-aminopeptidase, domain B Ami103574_RS11020 PF00144 Beta-lactamase Ami103574_RS11025 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS11025 PF13426 PAS domain Ami103574_RS11025 PF00158 Sigma-54 interaction domain Ami103574_RS11030 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ami103574_RS11030 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS11035 PF00591 Glycosyl transferase family, a/b domain Ami103574_RS11035 PF02885 Glycosyl transferase family, helical bundle domain Ami103574_RS11035 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Ami103574_RS11040 PF01676 Metalloenzyme superfamily Ami103574_RS11050 PF02646 RmuC family Ami103574_RS11060 PF00378 Enoyl-CoA hydratase/isomerase Ami103574_RS11075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ami103574_RS11075 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS11080 PF03099 Biotin/lipoate A/B protein ligase family Ami103574_RS11080 PF10437 Bacterial lipoate protein ligase C-terminus Ami103574_RS11090 PF01145 SPFH domain / Band 7 family Ami103574_RS11100 PF04434 SWIM zinc finger Ami103574_RS11100 PF00176 SNF2 family N-terminal domain Ami103574_RS11100 PF00271 Helicase conserved C-terminal domain Ami103574_RS11115 PF00155 Aminotransferase class I and II Ami103574_RS11115 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS11120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ami103574_RS11120 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS11120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ami103574_RS11125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami103574_RS11125 PF00037 4Fe-4S binding domain Ami103574_RS11125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ami103574_RS11145 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS11145 PF03772 Competence protein Ami103574_RS11145 PF13567 Domain of unknown function (DUF4131) Ami103574_RS11150 PF00912 Transglycosylase Ami103574_RS11150 PF00905 Penicillin binding protein transpeptidase domain Ami103574_RS11155 PF01979 Amidohydrolase family Ami103574_RS11160 PF03606 C4-dicarboxylate anaerobic carrier Ami103574_RS11165 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS11165 PF00989 PAS fold Ami103574_RS11165 PF00158 Sigma-54 interaction domain Ami103574_RS11190 PF07451 Stage V sporulation protein AD (SpoVAD) Ami103574_RS11195 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Ami103574_RS11200 PF02545 Maf-like protein Ami103574_RS11210 PF00390 Malic enzyme, N-terminal domain Ami103574_RS11210 PF03949 Malic enzyme, NAD binding domain Ami103574_RS11215 PF01012 Electron transfer flavoprotein domain Ami103574_RS11215 PF13237 4Fe-4S dicluster domain Ami103574_RS11215 PF00766 Electron transfer flavoprotein FAD-binding domain Ami103574_RS11220 PF01012 Electron transfer flavoprotein domain Ami103574_RS11225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Ami103574_RS11225 PF02770 Acyl-CoA dehydrogenase, middle domain Ami103574_RS11225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Ami103574_RS11230 PF04545 Sigma-70, region 4 Ami103574_RS11230 PF04539 Sigma-70 region 3 Ami103574_RS11230 PF04542 Sigma-70 region 2 Ami103574_RS11235 PF13581 Histidine kinase-like ATPase domain Ami103574_RS11240 PF01740 STAS domain Ami103574_RS11245 PF02926 THUMP domain Ami103574_RS11245 PF02568 Thiamine biosynthesis protein (ThiI) Ami103574_RS11250 PF00266 Aminotransferase class-V Ami103574_RS11255 PF01966 HD domain Ami103574_RS11255 PF00013 KH domain Ami103574_RS11255 PF12072 Domain of unknown function (DUF3552) Ami103574_RS11260 PF01098 Cell cycle protein Ami103574_RS11265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ami103574_RS11290 PF04002 RadC-like JAB domain Ami103574_RS11300 PF04542 Sigma-70 region 2 Ami103574_RS11300 PF04545 Sigma-70, region 4 Ami103574_RS11305 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS11305 PF03707 Bacterial signalling protein N terminal repeat Ami103574_RS11305 PF00563 EAL domain Ami103574_RS11310 PF08448 PAS fold Ami103574_RS11310 PF13426 PAS domain Ami103574_RS11310 PF08447 PAS fold Ami103574_RS11310 PF05231 MASE1 Ami103574_RS11310 PF00563 EAL domain Ami103574_RS11310 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS11315 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami103574_RS11320 PF00005 ABC transporter Ami103574_RS11325 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS11340 PF02224 Cytidylate kinase Ami103574_RS11345 PF03477 ATP cone domain Ami103574_RS11350 PF05239 PRC-barrel domain Ami103574_RS11355 PF05697 Bacterial trigger factor protein (TF) Ami103574_RS11355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Ami103574_RS11355 PF05698 Bacterial trigger factor protein (TF) C-terminus Ami103574_RS11360 PF04542 Sigma-70 region 2 Ami103574_RS11360 PF04539 Sigma-70 region 3 Ami103574_RS11360 PF04545 Sigma-70, region 4 Ami103574_RS11365 PF00701 Dihydrodipicolinate synthetase family Ami103574_RS11370 PF05173 Dihydrodipicolinate reductase, C-terminus Ami103574_RS11370 PF01113 Dihydrodipicolinate reductase, N-terminus Ami103574_RS11375 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain Ami103574_RS11380 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS11380 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ami103574_RS11385 PF01645 Conserved region in glutamate synthase Ami103574_RS11385 PF00310 Glutamine amidotransferases class-II Ami103574_RS11385 PF04898 Glutamate synthase central domain Ami103574_RS11385 PF01493 GXGXG motif Ami103574_RS11390 PF12437 Glutamine synthetase type III N terminal Ami103574_RS11390 PF18318 Glutamine synthetase C-terminal domain Ami103574_RS11390 PF00120 Glutamine synthetase, catalytic domain Ami103574_RS11400 PF04545 Sigma-70, region 4 Ami103574_RS11400 PF04542 Sigma-70 region 2 Ami103574_RS11410 PF00453 Ribosomal protein L20 Ami103574_RS11415 PF01632 Ribosomal protein L35 Ami103574_RS11420 PF00707 Translation initiation factor IF-3, C-terminal domain Ami103574_RS11420 PF05198 Translation initiation factor IF-3, N-terminal domain Ami103574_RS11425 PF00717 Peptidase S24-like Ami103574_RS11425 PF01726 LexA DNA binding domain Ami103574_RS11435 PF07724 AAA domain (Cdc48 subfamily) Ami103574_RS11435 PF06689 ClpX C4-type zinc finger Ami103574_RS11435 PF10431 C-terminal, D2-small domain, of ClpB protein Ami103574_RS11440 PF04122 Putative cell wall binding repeat 2 Ami103574_RS11440 PF01520 N-acetylmuramoyl-L-alanine amidase Ami103574_RS11445 PF02562 PhoH-like protein Ami103574_RS11445 PF13638 PIN domain Ami103574_RS11450 PF05036 Sporulation related domain Ami103574_RS11450 PF01520 N-acetylmuramoyl-L-alanine amidase Ami103574_RS11460 PF00805 Pentapeptide repeats (8 copies) Ami103574_RS11475 PF00005 ABC transporter Ami103574_RS11475 PF12704 MacB-like periplasmic core domain Ami103574_RS11475 PF02687 FtsX-like permease family Ami103574_RS11495 PF00005 ABC transporter Ami103574_RS11500 PF02687 FtsX-like permease family Ami103574_RS11500 PF00005 ABC transporter Ami103574_RS11500 PF12704 MacB-like periplasmic core domain Ami103574_RS11505 PF00005 ABC transporter Ami103574_RS11505 PF12704 MacB-like periplasmic core domain Ami103574_RS11505 PF02687 FtsX-like permease family Ami103574_RS11515 PF10634 Fe2+ transport protein Ami103574_RS11520 PF03239 Iron permease FTR1 family Ami103574_RS11525 PF00155 Aminotransferase class I and II Ami103574_RS11525 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS11530 PF00403 Heavy-metal-associated domain Ami103574_RS11535 PF01022 Bacterial regulatory protein, arsR family Ami103574_RS11555 PF01066 CDP-alcohol phosphatidyltransferase Ami103574_RS11560 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS11565 PF09278 MerR, DNA binding Ami103574_RS11565 PF00376 MerR family regulatory protein Ami103574_RS11580 PF08447 PAS fold Ami103574_RS11580 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS11580 PF08448 PAS fold Ami103574_RS11580 PF13426 PAS domain Ami103574_RS11580 PF05231 MASE1 Ami103574_RS11580 PF00563 EAL domain Ami103574_RS11585 PF17156 Gammaproteobacterial periplasmic sensor domain Ami103574_RS11585 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS11590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ami103574_RS11590 PF02824 TGS domain Ami103574_RS11590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami103574_RS11590 PF03129 Anticodon binding domain Ami103574_RS11595 PF02277 Phosphoribosyltransferase Ami103574_RS11650 PF00005 ABC transporter Ami103574_RS11650 PF12848 ABC transporter Ami103574_RS11675 PF00072 Response regulator receiver domain Ami103574_RS11675 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS11680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Ami103574_RS11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS11680 PF00989 PAS fold Ami103574_RS11680 PF17203 Single cache domain 3 Ami103574_RS11685 PF03551 Transcriptional regulator PadR-like family Ami103574_RS11690 PF01098 Cell cycle protein Ami103574_RS11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS11700 PF03466 LysR substrate binding domain Ami103574_RS11705 PF03601 Conserved hypothetical protein 698 Ami103574_RS11710 PF00936 BMC domain Ami103574_RS11715 PF00834 Ribulose-phosphate 3 epimerase family Ami103574_RS11720 PF03193 RsgA GTPase Ami103574_RS11720 PF16745 RsgA N-terminal domain Ami103574_RS11725 PF03793 PASTA domain Ami103574_RS11725 PF00069 Protein kinase domain Ami103574_RS11735 PF01029 NusB family Ami103574_RS11735 PF01189 16S rRNA methyltransferase RsmB/F Ami103574_RS11740 PF04298 Putative neutral zinc metallopeptidase Ami103574_RS11745 PF00551 Formyl transferase Ami103574_RS11745 PF02911 Formyl transferase, C-terminal domain Ami103574_RS11750 PF01327 Polypeptide deformylase Ami103574_RS11755 PF18074 Primosomal protein N C-terminal domain Ami103574_RS11755 PF17764 3′ DNA-binding domain (3′BD) Ami103574_RS11755 PF00271 Helicase conserved C-terminal domain Ami103574_RS11755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Ami103574_RS11755 PF04851 Type III restriction enzyme, res subunit Ami103574_RS11760 PF02677 Epoxyqueuosine reductase QueH Ami103574_RS11765 PF04055 Radical SAM superfamily Ami103574_RS11765 PF16199 Radical_SAM C-terminal domain Ami103574_RS11770 PF00265 Thymidine kinase Ami103574_RS11910 PF01205 Uncharacterized protein family UPF0029 Ami103574_RS11910 PF09186 Domain of unknown function (DUF1949) Ami103574_RS11915 PF01926 50S ribosome-binding GTPase Ami103574_RS11915 PF13167 GTP-binding GTPase N-terminal Ami103574_RS11915 PF16360 GTP-binding GTPase Middle Region Ami103574_RS11925 PF06018 CodY GAF-like domain Ami103574_RS11925 PF08222 CodY helix-turn-helix domain Ami103574_RS11930 PF07724 AAA domain (Cdc48 subfamily) Ami103574_RS11930 PF10431 C-terminal, D2-small domain, of ClpB protein Ami103574_RS11930 PF00004 ATPase family associated with various cellular activities (AAA) Ami103574_RS11935 PF00227 Proteasome subunit Ami103574_RS11940 PF01396 Topoisomerase DNA binding C4 zinc finger Ami103574_RS11940 PF01131 DNA topoisomerase Ami103574_RS11940 PF01751 Toprim domain Ami103574_RS11945 PF02481 DNA recombination-mediator protein A Ami103574_RS11950 PF13335 Magnesium chelatase, subunit ChlI C-terminal Ami103574_RS11950 PF01078 Magnesium chelatase, subunit ChlI Ami103574_RS11955 PF02021 Uncharacterised protein family UPF0102 Ami103574_RS11960 PF00707 Translation initiation factor IF-3, C-terminal domain Ami103574_RS11960 PF05198 Translation initiation factor IF-3, N-terminal domain Ami103574_RS11975 PF00753 Metallo-beta-lactamase superfamily Ami103574_RS11980 PF02080 TrkA-C domain Ami103574_RS11980 PF02254 TrkA-N domain Ami103574_RS11980 PF00999 Sodium/hydrogen exchanger family Ami103574_RS11985 PF02386 Cation transport protein Ami103574_RS11990 PF02386 Cation transport protein Ami103574_RS11995 PF00571 CBS domain Ami103574_RS12000 PF08206 Ribonuclease B OB domain Ami103574_RS12000 PF00575 S1 RNA binding domain Ami103574_RS12000 PF17876 Cold shock domain Ami103574_RS12000 PF00773 RNB domain Ami103574_RS12010 PF01063 Amino-transferase class IV Ami103574_RS12015 PF03030 Inorganic H+ pyrophosphatase Ami103574_RS12020 PF03840 Preprotein translocase SecG subunit Ami103574_RS12025 PF03952 Enolase, N-terminal domain Ami103574_RS12025 PF00113 Enolase, C-terminal TIM barrel domain Ami103574_RS12030 PF00121 Triosephosphate isomerase Ami103574_RS12035 PF00162 Phosphoglycerate kinase Ami103574_RS12040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ami103574_RS12040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ami103574_RS12045 PF04963 Sigma-54 factor, core binding domain Ami103574_RS12045 PF00309 Sigma-54 factor, Activator interacting domain (AID) Ami103574_RS12045 PF04552 Sigma-54, DNA binding domain Ami103574_RS12050 PF00588 SpoU rRNA Methylase family Ami103574_RS12055 PF00742 Homoserine dehydrogenase Ami103574_RS12055 PF01842 ACT domain Ami103574_RS12055 PF03447 Homoserine dehydrogenase, NAD binding domain Ami103574_RS12060 PF07517 SecA DEAD-like domain Ami103574_RS12060 PF02810 SEC-C motif Ami103574_RS12060 PF07516 SecA Wing and Scaffold domain Ami103574_RS12060 PF01043 SecA preprotein cross-linking domain Ami103574_RS12070 PF04055 Radical SAM superfamily Ami103574_RS12070 PF06968 Biotin and Thiamin Synthesis associated domain Ami103574_RS12085 PF02607 B12 binding domain Ami103574_RS12085 PF02310 B12 binding domain Ami103574_RS12095 PF06253 Trimethylamine methyltransferase (MTTB) Ami103574_RS12100 PF06253 Trimethylamine methyltransferase (MTTB) Ami103574_RS12105 PF02310 B12 binding domain Ami103574_RS12105 PF02607 B12 binding domain Ami103574_RS12110 PF02311 AraC-like ligand binding domain Ami103574_RS12110 PF12833 Helix-turn-helix domain Ami103574_RS12120 PF00936 BMC domain Ami103574_RS12130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS12130 PF12729 Four helix bundle sensory module for signal transduction Ami103574_RS12130 PF00672 HAMP domain Ami103574_RS12135 PF02203 Tar ligand binding domain homologue Ami103574_RS12135 PF00672 HAMP domain Ami103574_RS12135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS12155 PF00589 Phage integrase family Ami103574_RS12155 PF02899 Phage integrase, N-terminal SAM-like domain Ami103574_RS12160 PF01420 Type I restriction modification DNA specificity domain Ami103574_RS12165 PF02384 N-6 DNA Methylase Ami103574_RS12175 PF08447 PAS fold Ami103574_RS12175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS12185 PF10576 Iron-sulfur binding domain of endonuclease III Ami103574_RS12185 PF00730 HhH-GPD superfamily base excision DNA repair protein Ami103574_RS12185 PF00633 Helix-hairpin-helix motif Ami103574_RS12215 PF00330 Aconitase family (aconitate hydratase) Ami103574_RS12220 PF18324 Hypothetical protein TT1725 Ami103574_RS12220 PF00180 Isocitrate/isopropylmalate dehydrogenase Ami103574_RS12225 PF07729 FCD domain Ami103574_RS12225 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS12230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ami103574_RS12230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ami103574_RS12235 PF13393 Histidyl-tRNA synthetase Ami103574_RS12240 PF01634 ATP phosphoribosyltransferase Ami103574_RS12245 PF00815 Histidinol dehydrogenase Ami103574_RS12250 PF00155 Aminotransferase class I and II Ami103574_RS12255 PF00475 Imidazoleglycerol-phosphate dehydratase Ami103574_RS12260 PF00117 Glutamine amidotransferase class-I Ami103574_RS12265 PF00977 Histidine biosynthesis protein Ami103574_RS12270 PF00977 Histidine biosynthesis protein Ami103574_RS12275 PF01502 Phosphoribosyl-AMP cyclohydrolase Ami103574_RS12275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Ami103574_RS12285 PF01381 Helix-turn-helix Ami103574_RS12290 PF00365 Phosphofructokinase Ami103574_RS12295 PF01336 OB-fold nucleic acid binding domain Ami103574_RS12295 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ami103574_RS12295 PF14579 Helix-hairpin-helix motif Ami103574_RS12295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ami103574_RS12295 PF02811 PHP domain Ami103574_RS12300 PF03606 C4-dicarboxylate anaerobic carrier Ami103574_RS12305 PF10662 Ethanolamine utilisation - propanediol utilisation Ami103574_RS12310 PF00936 BMC domain Ami103574_RS12315 PF03030 Inorganic H+ pyrophosphatase Ami103574_RS12320 PF00324 Amino acid permease Ami103574_RS12325 PF02424 ApbE family Ami103574_RS12350 PF00348 Polyprenyl synthetase Ami103574_RS12355 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami103574_RS12420 PF02903 Alpha amylase, N-terminal ig-like domain Ami103574_RS12420 PF00395 S-layer homology domain Ami103574_RS12420 PF00128 Alpha amylase, catalytic domain Ami103574_RS12440 PF07728 AAA domain (dynein-related subfamily) Ami103574_RS12455 PF00155 Aminotransferase class I and II Ami103574_RS12460 PF02423 Ornithine cyclodeaminase/mu-crystallin family Ami103574_RS12465 PF13556 PucR C-terminal helix-turn-helix domain Ami103574_RS12465 PF05651 Putative sugar diacid recognition Ami103574_RS12465 PF17853 GGDEF-like domain Ami103574_RS12470 PF06445 GyrI-like small molecule binding domain Ami103574_RS12470 PF13411 MerR HTH family regulatory protein Ami103574_RS12475 PF01980 tRNA-methyltransferase O Ami103574_RS12475 PF18389 TrmO C-terminal domain Ami103574_RS12480 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Ami103574_RS12485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Ami103574_RS12490 PF07690 Major Facilitator Superfamily Ami103574_RS12500 PF00376 MerR family regulatory protein Ami103574_RS12500 PF09278 MerR, DNA binding Ami103574_RS12505 PF02915 Rubrerythrin Ami103574_RS12540 PF04055 Radical SAM superfamily Ami103574_RS12540 PF13187 4Fe-4S dicluster domain Ami103574_RS12545 PF02901 Pyruvate formate lyase-like Ami103574_RS12545 PF01228 Glycine radical Ami103574_RS12550 PF12833 Helix-turn-helix domain Ami103574_RS12550 PF10114 Sensory domain found in PocR Ami103574_RS12575 PF01739 CheR methyltransferase, SAM binding domain Ami103574_RS12585 PF04055 Radical SAM superfamily Ami103574_RS12585 PF01938 TRAM domain Ami103574_RS12585 PF00919 Uncharacterized protein family UPF0004 Ami103574_RS12590 PF05746 DALR anticodon binding domain Ami103574_RS12590 PF00750 tRNA synthetases class I (R) Ami103574_RS12590 PF03485 Arginyl tRNA synthetase N terminal domain Ami103574_RS12595 PF04463 Protein of unknown function (DUF523) Ami103574_RS12600 PF01713 Smr domain Ami103574_RS12600 PF00488 MutS domain V Ami103574_RS12605 PF05164 Cell division protein ZapA Ami103574_RS12610 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Ami103574_RS12610 PF03147 Ferredoxin-fold anticodon binding domain Ami103574_RS12610 PF03484 tRNA synthetase B5 domain Ami103574_RS12610 PF03483 B3/4 domain Ami103574_RS12610 PF01588 Putative tRNA binding domain Ami103574_RS12615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Ami103574_RS12615 PF01409 tRNA synthetases class II core domain (F) Ami103574_RS12620 PF08032 RNA 2'-O ribose methyltransferase substrate binding Ami103574_RS12620 PF00588 SpoU rRNA Methylase family Ami103574_RS12625 PF00091 Tubulin/FtsZ family, GTPase domain Ami103574_RS12625 PF12327 FtsZ family, C-terminal domain Ami103574_RS12630 PF06947 Protein of unknown function (DUF1290) Ami103574_RS12650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ami103574_RS12655 PF04101 Glycosyltransferase family 28 C-terminal domain Ami103574_RS12655 PF03033 Glycosyltransferase family 28 N-terminal domain Ami103574_RS12660 PF01098 Cell cycle protein Ami103574_RS12665 PF02875 Mur ligase family, glutamate ligase domain Ami103574_RS12665 PF08245 Mur ligase middle domain Ami103574_RS12670 PF00953 Glycosyl transferase family 4 Ami103574_RS12675 PF02875 Mur ligase family, glutamate ligase domain Ami103574_RS12675 PF01225 Mur ligase family, catalytic domain Ami103574_RS12675 PF08245 Mur ligase middle domain Ami103574_RS12680 PF02875 Mur ligase family, glutamate ligase domain Ami103574_RS12680 PF01225 Mur ligase family, catalytic domain Ami103574_RS12680 PF08245 Mur ligase middle domain Ami103574_RS12685 PF03717 Penicillin-binding Protein dimerisation domain Ami103574_RS12685 PF00905 Penicillin binding protein transpeptidase domain Ami103574_RS12685 PF03793 PASTA domain Ami103574_RS12695 PF01795 MraW methylase family Ami103574_RS12700 PF02381 MraZ protein, putative antitoxin-like Ami103574_RS12715 PF09084 NMT1/THI5 like Ami103574_RS12720 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS12725 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS12730 PF00005 ABC transporter Ami103574_RS12735 PF00291 Pyridoxal-phosphate dependent enzyme Ami103574_RS12740 PF00899 ThiF family Ami103574_RS12745 PF01791 DeoC/LacD family aldolase Ami103574_RS12755 PF01926 50S ribosome-binding GTPase Ami103574_RS12755 PF06071 Protein of unknown function (DUF933) Ami103574_RS12760 PF01790 Prolipoprotein diacylglyceryl transferase Ami103574_RS12770 PF18277 AbrB C-terminal domain Ami103574_RS12770 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ami103574_RS12790 PF05175 Methyltransferase small domain Ami103574_RS12795 PF04468 PSP1 C-terminal conserved region Ami103574_RS12800 PF09115 DNA polymerase III, delta subunit, C terminal Ami103574_RS12805 PF02223 Thymidylate kinase Ami103574_RS12830 PF04055 Radical SAM superfamily Ami103574_RS12840 PF01594 AI-2E family transporter Ami103574_RS12855 PF00392 Bacterial regulatory proteins, gntR family Ami103574_RS12855 PF07729 FCD domain Ami103574_RS12865 PF13520 Amino acid permease Ami103574_RS12870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ami103574_RS12870 PF02142 MGS-like domain Ami103574_RS12870 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ami103574_RS12875 PF00117 Glutamine amidotransferase class-I Ami103574_RS12875 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Ami103574_RS12885 PF00690 Cation transporter/ATPase, N-terminus Ami103574_RS12885 PF00689 Cation transporting ATPase, C-terminus Ami103574_RS12890 PF02926 THUMP domain Ami103574_RS12890 PF01170 Putative RNA methylase family UPF0020 Ami103574_RS12905 PF01522 Polysaccharide deacetylase Ami103574_RS12925 PF12116 Stage III sporulation protein D Ami103574_RS12930 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS12930 PF00563 EAL domain Ami103574_RS12930 PF13426 PAS domain Ami103574_RS12940 PF01212 Beta-eliminating lyase Ami103574_RS12950 PF00072 Response regulator receiver domain Ami103574_RS12955 PF00132 Bacterial transferase hexapeptide (six repeats) Ami103574_RS12960 PF13407 Periplasmic binding protein domain Ami103574_RS12965 PF02653 Branched-chain amino acid transport system / permease component Ami103574_RS12970 PF00005 ABC transporter Ami103574_RS12975 PF05025 RbsD / FucU transport protein family Ami103574_RS12980 PF00356 Bacterial regulatory proteins, lacI family Ami103574_RS13000 PF00857 Isochorismatase family Ami103574_RS13005 PF00324 Amino acid permease Ami103574_RS13010 PF00158 Sigma-54 interaction domain Ami103574_RS13010 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS13010 PF00072 Response regulator receiver domain Ami103574_RS13015 PF13426 PAS domain Ami103574_RS13015 PF13188 PAS domain Ami103574_RS13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS13015 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS13015 PF00989 PAS fold Ami103574_RS13020 PF00350 Dynamin family Ami103574_RS13030 PF07690 Major Facilitator Superfamily Ami103574_RS13050 PF05816 Toxic anion resistance protein (TelA) Ami103574_RS13060 PF06827 Zinc finger found in FPG and IleRS Ami103574_RS13060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Ami103574_RS13060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Ami103574_RS13070 PF00403 Heavy-metal-associated domain Ami103574_RS13075 PF07690 Major Facilitator Superfamily Ami103574_RS13090 PF00152 tRNA synthetases class II (D, K and N) Ami103574_RS13090 PF01336 OB-fold nucleic acid binding domain Ami103574_RS13095 PF01208 Uroporphyrinogen decarboxylase (URO-D) Ami103574_RS13105 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS13105 PF17158 Membrane-associated sensor, integral membrane domain Ami103574_RS13125 PF01668 SmpB protein Ami103574_RS13130 PF10502 Signal peptidase, peptidase S26 Ami103574_RS13135 PF10502 Signal peptidase, peptidase S26 Ami103574_RS13140 PF00849 RNA pseudouridylate synthase Ami103574_RS13140 PF01479 S4 domain Ami103574_RS13160 PF01116 Fructose-bisphosphate aldolase class-II Ami103574_RS13180 PF00210 Ferritin-like domain Ami103574_RS13185 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain Ami103574_RS13185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Ami103574_RS13185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Ami103574_RS13190 PF17755 UvrA DNA-binding domain Ami103574_RS13190 PF17760 UvrA interaction domain Ami103574_RS13195 PF12344 Ultra-violet resistance protein B Ami103574_RS13195 PF00271 Helicase conserved C-terminal domain Ami103574_RS13195 PF04851 Type III restriction enzyme, res subunit Ami103574_RS13195 PF02151 UvrB/uvrC motif Ami103574_RS13195 PF17757 UvrB interaction domain Ami103574_RS13200 PF00285 Citrate synthase, C-terminal domain Ami103574_RS13210 PF14525 AraC-binding-like domain Ami103574_RS13210 PF12833 Helix-turn-helix domain Ami103574_RS13230 PF00005 ABC transporter Ami103574_RS13235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami103574_RS13235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ami103574_RS13235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ami103574_RS13235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ami103574_RS13235 PF10371 Domain of unknown function Ami103574_RS13250 PF02132 RecR protein Ami103574_RS13250 PF13662 Toprim domain Ami103574_RS13255 PF02575 YbaB/EbfC DNA-binding family Ami103574_RS13260 PF12169 DNA polymerase III subunits gamma and tau domain III Ami103574_RS13270 PF03352 Methyladenine glycosylase Ami103574_RS13270 PF13302 Acetyltransferase (GNAT) domain Ami103574_RS13270 PF13673 Acetyltransferase (GNAT) domain Ami103574_RS13270 PF00117 Glutamine amidotransferase class-I Ami103574_RS13270 PF00958 GMP synthase C terminal domain Ami103574_RS13290 PF03120 NAD-dependent DNA ligase OB-fold domain Ami103574_RS13290 PF12826 Helix-hairpin-helix motif Ami103574_RS13290 PF00533 BRCA1 C Terminus (BRCT) domain Ami103574_RS13290 PF01653 NAD-dependent DNA ligase adenylation domain Ami103574_RS13295 PF13361 UvrD-like helicase C-terminal domain Ami103574_RS13295 PF00580 UvrD/REP helicase N-terminal domain Ami103574_RS13300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami103574_RS13300 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami103574_RS13305 PF04055 Radical SAM superfamily Ami103574_RS13305 PF06968 Biotin and Thiamin Synthesis associated domain Ami103574_RS13315 PF00005 ABC transporter Ami103574_RS13325 PF00936 BMC domain Ami103574_RS13330 PF00171 Aldehyde dehydrogenase family Ami103574_RS13330 PF00465 Iron-containing alcohol dehydrogenase Ami103574_RS13335 PF00936 BMC domain Ami103574_RS13355 PF10662 Ethanolamine utilisation - propanediol utilisation Ami103574_RS13360 PF00936 BMC domain Ami103574_RS13365 PF04055 Radical SAM superfamily Ami103574_RS13365 PF13187 4Fe-4S dicluster domain Ami103574_RS13370 PF02901 Pyruvate formate lyase-like Ami103574_RS13370 PF01228 Glycine radical Ami103574_RS13375 PF00230 Major intrinsic protein Ami103574_RS13380 PF00936 BMC domain Ami103574_RS13385 PF00672 HAMP domain Ami103574_RS13385 PF06580 Histidine kinase Ami103574_RS13385 PF02743 Cache domain Ami103574_RS13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS13390 PF12833 Helix-turn-helix domain Ami103574_RS13390 PF00072 Response regulator receiver domain Ami103574_RS13395 PF04227 Indigoidine synthase A like protein Ami103574_RS13400 PF12850 Calcineurin-like phosphoesterase superfamily domain Ami103574_RS13405 PF03143 Elongation factor Tu C-terminal domain Ami103574_RS13405 PF03144 Elongation factor Tu domain 2 Ami103574_RS13405 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS13410 PF14492 Elongation Factor G, domain II Ami103574_RS13410 PF03764 Elongation factor G, domain IV Ami103574_RS13410 PF00679 Elongation factor G C-terminus Ami103574_RS13410 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS13410 PF03144 Elongation factor Tu domain 2 Ami103574_RS13415 PF00177 Ribosomal protein S7p/S5e Ami103574_RS13420 PF00164 Ribosomal protein S12/S23 Ami103574_RS13425 PF04997 RNA polymerase Rpb1, domain 1 Ami103574_RS13425 PF00623 RNA polymerase Rpb1, domain 2 Ami103574_RS13425 PF04998 RNA polymerase Rpb1, domain 5 Ami103574_RS13425 PF04983 RNA polymerase Rpb1, domain 3 Ami103574_RS13425 PF05000 RNA polymerase Rpb1, domain 4 Ami103574_RS13430 PF04561 RNA polymerase Rpb2, domain 2 Ami103574_RS13430 PF04565 RNA polymerase Rpb2, domain 3 Ami103574_RS13430 PF04563 RNA polymerase beta subunit Ami103574_RS13430 PF10385 RNA polymerase beta subunit external 1 domain Ami103574_RS13430 PF00562 RNA polymerase Rpb2, domain 6 Ami103574_RS13430 PF04560 RNA polymerase Rpb2, domain 7 Ami103574_RS13435 PF00542 Ribosomal protein L7/L12 C-terminal domain Ami103574_RS13435 PF16320 Ribosomal protein L7/L12 dimerisation domain Ami103574_RS13440 PF00466 Ribosomal protein L10 Ami103574_RS13445 PF00687 Ribosomal protein L1p/L10e family Ami103574_RS13450 PF03946 Ribosomal protein L11, N-terminal domain Ami103574_RS13450 PF00298 Ribosomal protein L11, RNA binding domain Ami103574_RS13455 PF00467 KOW motif Ami103574_RS13455 PF02357 Transcription termination factor nusG Ami103574_RS13460 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Ami103574_RS13465 PF00471 Ribosomal protein L33 Ami103574_RS13480 PF03062 MBOAT, membrane-bound O-acyltransferase family Ami103574_RS13495 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS13495 PF03143 Elongation factor Tu C-terminal domain Ami103574_RS13495 PF03144 Elongation factor Tu domain 2 Ami103574_RS13505 PF08281 Sigma-70, region 4 Ami103574_RS13505 PF04542 Sigma-70 region 2 Ami103574_RS13510 PF00588 SpoU rRNA Methylase family Ami103574_RS13510 PF08032 RNA 2'-O ribose methyltransferase substrate binding Ami103574_RS13515 PF00186 Dihydrofolate reductase Ami103574_RS13520 PF00303 Thymidylate synthase Ami103574_RS13525 PF00636 Ribonuclease III domain Ami103574_RS13530 PF09190 DALR domain Ami103574_RS13530 PF01406 tRNA synthetases class I (C) catalytic domain Ami103574_RS13540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ami103574_RS13545 PF00293 NUDIX domain Ami103574_RS13550 PF03129 Anticodon binding domain Ami103574_RS13550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami103574_RS13550 PF04073 Aminoacyl-tRNA editing domain Ami103574_RS13555 PF02542 YgbB family Ami103574_RS13555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ami103574_RS13565 PF02559 CarD-like/TRCF domain Ami103574_RS13570 PF00690 Cation transporter/ATPase, N-terminus Ami103574_RS13570 PF00689 Cation transporting ATPase, C-terminus Ami103574_RS13575 PF16736 Single Cache-like Ami103574_RS13575 PF00989 PAS fold Ami103574_RS13575 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS13575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS13580 PF00072 Response regulator receiver domain Ami103574_RS13580 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS13585 PF13520 Amino acid permease Ami103574_RS13590 PF00563 EAL domain Ami103574_RS13590 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS13590 PF00498 FHA domain Ami103574_RS13600 PF18073 Rubredoxin metal binding domain Ami103574_RS13605 PF14492 Elongation Factor G, domain II Ami103574_RS13605 PF00679 Elongation factor G C-terminus Ami103574_RS13605 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS13605 PF03764 Elongation factor G, domain IV Ami103574_RS13605 PF03144 Elongation factor Tu domain 2 Ami103574_RS13610 PF00710 Asparaginase, N-terminal Ami103574_RS13610 PF17763 Glutaminase/Asparaginase C-terminal domain Ami103574_RS13615 PF01336 OB-fold nucleic acid binding domain Ami103574_RS13615 PF00152 tRNA synthetases class II (D, K and N) Ami103574_RS13630 PF00368 Hydroxymethylglutaryl-coenzyme A reductase Ami103574_RS13645 PF00158 Sigma-54 interaction domain Ami103574_RS13645 PF00072 Response regulator receiver domain Ami103574_RS13645 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS13665 PF02086 D12 class N6 adenine-specific DNA methyltransferase Ami103574_RS13670 PF01336 OB-fold nucleic acid binding domain Ami103574_RS13670 PF00152 tRNA synthetases class II (D, K and N) Ami103574_RS13675 PF03449 Transcription elongation factor, N-terminal Ami103574_RS13675 PF01272 Transcription elongation factor, GreA/GreB, C-term Ami103574_RS13680 PF06965 Na+/H+ antiporter 1 Ami103574_RS13685 PF02915 Rubrerythrin Ami103574_RS13695 PF01207 Dihydrouridine synthase (Dus) Ami103574_RS13700 PF03309 Type III pantothenate kinase Ami103574_RS13710 PF00364 Biotin-requiring enzyme Ami103574_RS13720 PF01039 Carboxyl transferase domain Ami103574_RS13730 PF17853 GGDEF-like domain Ami103574_RS13730 PF06018 CodY GAF-like domain Ami103574_RS13730 PF13556 PucR C-terminal helix-turn-helix domain Ami103574_RS13735 PF01434 Peptidase family M41 Ami103574_RS13735 PF17862 AAA+ lid domain Ami103574_RS13735 PF00004 ATPase family associated with various cellular activities (AAA) Ami103574_RS13740 PF11734 TilS substrate C-terminal domain Ami103574_RS13740 PF01171 PP-loop family Ami103574_RS13745 PF00005 ABC transporter Ami103574_RS13745 PF12848 ABC transporter Ami103574_RS13745 PF16326 ABC transporter C-terminal domain Ami103574_RS13750 PF12729 Four helix bundle sensory module for signal transduction Ami103574_RS13750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS13750 PF00672 HAMP domain Ami103574_RS13795 PF14667 Polysaccharide biosynthesis C-terminal domain Ami103574_RS13795 PF01943 Polysaccharide biosynthesis protein Ami103574_RS13815 PF00905 Penicillin binding protein transpeptidase domain Ami103574_RS13815 PF05569 BlaR1 peptidase M56 Ami103574_RS13830 PF07228 Stage II sporulation protein E (SpoIIE) Ami103574_RS13840 PF01026 TatD related DNase Ami103574_RS13855 PF02203 Tar ligand binding domain homologue Ami103574_RS13855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS13855 PF00672 HAMP domain Ami103574_RS13870 PF08264 Anticodon-binding domain of tRNA Ami103574_RS13870 PF09334 tRNA synthetases class I (M) Ami103574_RS13870 PF01588 Putative tRNA binding domain Ami103574_RS13880 PF02632 BioY family Ami103574_RS13885 PF08279 HTH domain Ami103574_RS13885 PF03099 Biotin/lipoate A/B protein ligase family Ami103574_RS13885 PF02237 Biotin protein ligase C terminal domain Ami103574_RS13900 PF04072 Leucine carboxyl methyltransferase Ami103574_RS13910 PF13280 WYL domain Ami103574_RS13910 PF08279 HTH domain Ami103574_RS13920 PF01169 Uncharacterized protein family UPF0016 Ami103574_RS13935 PF00005 ABC transporter Ami103574_RS13950 PF03466 LysR substrate binding domain Ami103574_RS13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS13965 PF00072 Response regulator receiver domain Ami103574_RS13965 PF04397 LytTr DNA-binding domain Ami103574_RS13975 PF02654 Cobalamin-5-phosphate synthase Ami103574_RS13985 PF03466 LysR substrate binding domain Ami103574_RS13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami103574_RS14005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ami103574_RS14020 PF02653 Branched-chain amino acid transport system / permease component Ami103574_RS14025 PF11862 Domain of unknown function (DUF3382) Ami103574_RS14025 PF02653 Branched-chain amino acid transport system / permease component Ami103574_RS14030 PF00005 ABC transporter Ami103574_RS14030 PF12399 Branched-chain amino acid ATP-binding cassette transporter Ami103574_RS14035 PF00005 ABC transporter Ami103574_RS14045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ami103574_RS14045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ami103574_RS14045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ami103574_RS14045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ami103574_RS14055 PF18357 Diphteria toxin repressor SH3 domain Ami103574_RS14055 PF01325 Iron dependent repressor, N-terminal DNA binding domain Ami103574_RS14055 PF02742 Iron dependent repressor, metal binding and dimerisation domain Ami103574_RS14065 PF00183 Hsp90 protein Ami103574_RS14070 PF00380 Ribosomal protein S9/S16 Ami103574_RS14075 PF00572 Ribosomal protein L13 Ami103574_RS14085 PF01177 Asp/Glu/Hydantoin racemase Ami103574_RS14090 PF03577 Peptidase family C69 Ami103574_RS14105 PF01381 Helix-turn-helix Ami103574_RS14110 PF03180 NLPA lipoprotein Ami103574_RS14115 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS14120 PF00005 ABC transporter Ami103574_RS14120 PF09383 NIL domain Ami103574_RS14125 PF02743 Cache domain Ami103574_RS14125 PF00672 HAMP domain Ami103574_RS14125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS14130 PF02743 Cache domain Ami103574_RS14130 PF00672 HAMP domain Ami103574_RS14130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS14135 PF01554 MatE Ami103574_RS14140 PF04073 Aminoacyl-tRNA editing domain Ami103574_RS14145 PF00403 Heavy-metal-associated domain Ami103574_RS14150 PF02583 Metal-sensitive transcriptional repressor Ami103574_RS14155 PF01638 HxlR-like helix-turn-helix Ami103574_RS14165 PF01594 AI-2E family transporter Ami103574_RS14180 PF01048 Phosphorylase superfamily Ami103574_RS14185 PF01420 Type I restriction modification DNA specificity domain Ami103574_RS14190 PF00491 Arginase family Ami103574_RS14195 PF13520 Amino acid permease Ami103574_RS14200 PF13426 PAS domain Ami103574_RS14200 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS14200 PF00158 Sigma-54 interaction domain Ami103574_RS14210 PF03551 Transcriptional regulator PadR-like family Ami103574_RS14235 PF01144 Coenzyme A transferase Ami103574_RS14240 PF01144 Coenzyme A transferase Ami103574_RS14245 PF07690 Major Facilitator Superfamily Ami103574_RS14250 PF00682 HMGL-like Ami103574_RS14250 PF08502 LeuA allosteric (dimerisation) domain Ami103574_RS14260 PF13426 PAS domain Ami103574_RS14260 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS14260 PF00158 Sigma-54 interaction domain Ami103574_RS14265 PF00117 Glutamine amidotransferase class-I Ami103574_RS14265 PF00958 GMP synthase C terminal domain Ami103574_RS14270 PF00571 CBS domain Ami103574_RS14270 PF00478 IMP dehydrogenase / GMP reductase domain Ami103574_RS14275 PF02557 D-alanyl-D-alanine carboxypeptidase Ami103574_RS14290 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS14290 PF00072 Response regulator receiver domain Ami103574_RS14295 PF00118 TCP-1/cpn60 chaperonin family Ami103574_RS14300 PF00166 Chaperonin 10 Kd subunit Ami103574_RS14305 PF04474 Protein of unknown function (DUF554) Ami103574_RS14320 PF13187 4Fe-4S dicluster domain Ami103574_RS14325 PF02629 CoA binding domain Ami103574_RS14325 PF06971 Putative DNA-binding protein N-terminus Ami103574_RS14330 PF00550 Phosphopantetheine attachment site Ami103574_RS14335 PF12848 ABC transporter Ami103574_RS14335 PF16326 ABC transporter C-terminal domain Ami103574_RS14335 PF00005 ABC transporter Ami103574_RS14340 PF00814 Glycoprotease family Ami103574_RS14350 PF00583 Acetyltransferase (GNAT) family Ami103574_RS14355 PF00814 Glycoprotease family Ami103574_RS14360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Ami103574_RS14370 PF00005 ABC transporter Ami103574_RS14385 PF12833 Helix-turn-helix domain Ami103574_RS14390 PF12822 ECF transporter, substrate-specific component Ami103574_RS14395 PF01546 Peptidase family M20/M25/M40 Ami103574_RS14405 PF01106 NifU-like domain Ami103574_RS14415 PF02915 Rubrerythrin Ami103574_RS14435 PF01168 Alanine racemase, N-terminal domain Ami103574_RS14440 PF13193 AMP-binding enzyme C-terminal domain Ami103574_RS14440 PF00501 AMP-binding enzyme Ami103574_RS14445 PF13193 AMP-binding enzyme C-terminal domain Ami103574_RS14445 PF00501 AMP-binding enzyme Ami103574_RS14455 PF04389 Peptidase family M28 Ami103574_RS14455 PF02225 PA domain Ami103574_RS14480 PF01638 HxlR-like helix-turn-helix Ami103574_RS14490 PF13302 Acetyltransferase (GNAT) domain Ami103574_RS14495 PF12848 ABC transporter Ami103574_RS14495 PF16326 ABC transporter C-terminal domain Ami103574_RS14495 PF00005 ABC transporter Ami103574_RS14520 PF04346 Ethanolamine utilisation protein, EutH Ami103574_RS14525 PF03319 Ethanolamine utilisation protein EutN/carboxysome Ami103574_RS14540 PF00936 BMC domain Ami103574_RS14545 PF00936 BMC domain Ami103574_RS14550 PF00936 BMC domain Ami103574_RS14555 PF00936 BMC domain Ami103574_RS14560 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Ami103574_RS14565 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Ami103574_RS14570 PF06277 Ethanolamine utilisation protein EutA Ami103574_RS14575 PF12282 Signal transduction histidine kinase Ami103574_RS14575 PF07568 Histidine kinase Ami103574_RS14575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS14580 PF03861 ANTAR domain Ami103574_RS14580 PF00072 Response regulator receiver domain Ami103574_RS14585 PF00936 BMC domain Ami103574_RS14590 PF10662 Ethanolamine utilisation - propanediol utilisation Ami103574_RS14595 PF03358 NADPH-dependent FMN reductase Ami103574_RS14610 PF01966 HD domain Ami103574_RS14610 PF00072 Response regulator receiver domain Ami103574_RS14620 PF00664 ABC transporter transmembrane region Ami103574_RS14620 PF00005 ABC transporter Ami103574_RS14620 PF08021 Siderophore-interacting FAD-binding domain Ami103574_RS14620 PF04954 Siderophore-interacting protein Ami103574_RS14625 PF00005 ABC transporter Ami103574_RS14625 PF00664 ABC transporter transmembrane region Ami103574_RS14640 PF00313 'Cold-shock' DNA-binding domain Ami103574_RS14655 PF00005 ABC transporter Ami103574_RS14660 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS14665 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS14665 PF00072 Response regulator receiver domain Ami103574_RS14670 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS14670 PF00072 Response regulator receiver domain Ami103574_RS14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS14675 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS14675 PF16736 Single Cache-like Ami103574_RS14675 PF00989 PAS fold Ami103574_RS14685 PF00009 Elongation factor Tu GTP binding domain Ami103574_RS14690 PF01507 Phosphoadenosine phosphosulfate reductase family Ami103574_RS14705 PF00356 Bacterial regulatory proteins, lacI family Ami103574_RS14710 PF08402 TOBE domain Ami103574_RS14710 PF00005 ABC transporter Ami103574_RS14715 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS14720 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS14730 PF00005 ABC transporter Ami103574_RS14730 PF00664 ABC transporter transmembrane region Ami103574_RS14735 PF00005 ABC transporter Ami103574_RS14740 PF01032 FecCD transport family Ami103574_RS14745 PF01032 FecCD transport family Ami103574_RS14750 PF01497 Periplasmic binding protein Ami103574_RS14760 PF12833 Helix-turn-helix domain Ami103574_RS14765 PF07731 Multicopper oxidase Ami103574_RS14765 PF00394 Multicopper oxidase Ami103574_RS14765 PF07732 Multicopper oxidase Ami103574_RS14780 PF01638 HxlR-like helix-turn-helix Ami103574_RS14800 PF02901 Pyruvate formate lyase-like Ami103574_RS14800 PF01228 Glycine radical Ami103574_RS14805 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal Ami103574_RS14805 PF18524 High potential iron-sulfur protein like Ami103574_RS14810 PF04055 Radical SAM superfamily Ami103574_RS14815 PF00293 NUDIX domain Ami103574_RS14815 PF09297 NADH pyrophosphatase zinc ribbon domain Ami103574_RS14835 PF12705 PD-(D/E)XK nuclease superfamily Ami103574_RS14840 PF03060 Nitronate monooxygenase Ami103574_RS14845 PF07977 FabA-like domain Ami103574_RS14850 PF00109 Beta-ketoacyl synthase, N-terminal domain Ami103574_RS14850 PF02801 Beta-ketoacyl synthase, C-terminal domain Ami103574_RS14860 PF00698 Acyl transferase domain Ami103574_RS14865 PF03060 Nitronate monooxygenase Ami103574_RS14870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ami103574_RS14870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ami103574_RS14875 PF00534 Glycosyl transferases group 1 Ami103574_RS14875 PF13439 Glycosyltransferase Family 4 Ami103574_RS14880 PF13419 Haloacid dehalogenase-like hydrolase Ami103574_RS14890 PF09371 Tex-like protein N-terminal domain Ami103574_RS14890 PF16921 Tex protein YqgF-like domain Ami103574_RS14890 PF00575 S1 RNA binding domain Ami103574_RS14890 PF17674 HHH domain Ami103574_RS14900 PF02810 SEC-C motif Ami103574_RS14900 PF07517 SecA DEAD-like domain Ami103574_RS14900 PF01043 SecA preprotein cross-linking domain Ami103574_RS14900 PF07516 SecA Wing and Scaffold domain Ami103574_RS14905 PF00571 CBS domain Ami103574_RS14905 PF01595 Cyclin M transmembrane N-terminal domain Ami103574_RS14905 PF03471 Transporter associated domain Ami103574_RS14910 PF04204 Homoserine O-succinyltransferase Ami103574_RS14915 PF13840 ACT domain Ami103574_RS14915 PF00696 Amino acid kinase family Ami103574_RS14920 PF02773 S-adenosylmethionine synthetase, C-terminal domain Ami103574_RS14920 PF02772 S-adenosylmethionine synthetase, central domain Ami103574_RS14920 PF00438 S-adenosylmethionine synthetase, N-terminal domain Ami103574_RS14935 PF01520 N-acetylmuramoyl-L-alanine amidase Ami103574_RS14940 PF02272 DHHA1 domain Ami103574_RS14940 PF01411 tRNA synthetases class II (A) Ami103574_RS14940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Ami103574_RS14945 PF01144 Coenzyme A transferase Ami103574_RS14950 PF01144 Coenzyme A transferase Ami103574_RS14955 PF02310 B12 binding domain Ami103574_RS14955 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Ami103574_RS14960 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Ami103574_RS14965 PF00488 MutS domain V Ami103574_RS14965 PF01713 Smr domain Ami103574_RS14975 PF12544 Lysine-2,3-aminomutase Ami103574_RS14975 PF04055 Radical SAM superfamily Ami103574_RS14990 PF00158 Sigma-54 interaction domain Ami103574_RS14995 PF03061 Thioesterase superfamily Ami103574_RS15000 PF00206 Lyase Ami103574_RS15000 PF14698 Argininosuccinate lyase C-terminal Ami103574_RS15010 PF01546 Peptidase family M20/M25/M40 Ami103574_RS15010 PF07687 Peptidase dimerisation domain Ami103574_RS15015 PF00571 CBS domain Ami103574_RS15015 PF02833 DHHA2 domain Ami103574_RS15015 PF07085 DRTGG domain Ami103574_RS15015 PF01368 DHH family Ami103574_RS15025 PF00005 ABC transporter Ami103574_RS15025 PF00664 ABC transporter transmembrane region Ami103574_RS15030 PF00664 ABC transporter transmembrane region Ami103574_RS15030 PF00005 ABC transporter Ami103574_RS15040 PF13932 GidA associated domain Ami103574_RS15040 PF01134 Glucose inhibited division protein A Ami103574_RS15040 PF01134 Glucose inhibited division protein A Ami103574_RS15040 PF13932 GidA associated domain Ami103574_RS15055 PF00158 Sigma-54 interaction domain Ami103574_RS15055 PF00072 Response regulator receiver domain Ami103574_RS15055 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS15090 PF00324 Amino acid permease Ami103574_RS15095 PF01546 Peptidase family M20/M25/M40 Ami103574_RS15105 PF13426 PAS domain Ami103574_RS15105 PF00158 Sigma-54 interaction domain Ami103574_RS15105 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS15110 PF06445 GyrI-like small molecule binding domain Ami103574_RS15110 PF13411 MerR HTH family regulatory protein Ami103574_RS15115 PF00072 Response regulator receiver domain Ami103574_RS15135 PF00849 RNA pseudouridylate synthase Ami103574_RS15135 PF01479 S4 domain Ami103574_RS15140 PF00691 OmpA family Ami103574_RS15140 PF13677 Membrane MotB of proton-channel complex MotA/MotB Ami103574_RS15145 PF01618 MotA/TolQ/ExbB proton channel family Ami103574_RS15150 PF00873 AcrB/AcrD/AcrF family Ami103574_RS15160 PF00672 HAMP domain Ami103574_RS15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS15160 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS15190 PF05593 RHS Repeat Ami103574_RS15190 PF03527 RHS protein Ami103574_RS15200 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS15200 PF00072 Response regulator receiver domain Ami103574_RS15210 PF02743 Cache domain Ami103574_RS15210 PF00672 HAMP domain Ami103574_RS15210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami103574_RS15215 PF01797 Transposase IS200 like Ami103574_RS15220 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Ami103574_RS15220 PF02843 Phosphoribosylglycinamide synthetase, C domain Ami103574_RS15220 PF02844 Phosphoribosylglycinamide synthetase, N domain Ami103574_RS15225 PF01808 AICARFT/IMPCHase bienzyme Ami103574_RS15225 PF02142 MGS-like domain Ami103574_RS15230 PF00551 Formyl transferase Ami103574_RS15235 PF00586 AIR synthase related protein, N-terminal domain Ami103574_RS15235 PF02769 AIR synthase related protein, C-terminal domain Ami103574_RS15240 PF00156 Phosphoribosyl transferase domain Ami103574_RS15245 PF01259 SAICAR synthetase Ami103574_RS15250 PF00731 AIR carboxylase Ami103574_RS15255 PF00586 AIR synthase related protein, N-terminal domain Ami103574_RS15255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Ami103574_RS15255 PF02769 AIR synthase related protein, C-terminal domain Ami103574_RS15265 PF04172 LrgB-like family Ami103574_RS15270 PF03788 LrgA family Ami103574_RS15285 PF07943 Penicillin-binding protein 5, C-terminal domain Ami103574_RS15285 PF00768 D-alanyl-D-alanine carboxypeptidase Ami103574_RS15305 PF04079 Segregation and condensation complex subunit ScpB Ami103574_RS15310 PF02616 Segregation and condensation protein ScpA Ami103574_RS15320 PF01008 Initiation factor 2 subunit family Ami103574_RS15325 PF03313 Serine dehydratase alpha chain Ami103574_RS15330 PF01842 ACT domain Ami103574_RS15330 PF03315 Serine dehydratase beta chain Ami103574_RS15335 PF01464 Transglycosylase SLT domain Ami103574_RS15340 PF00285 Citrate synthase, C-terminal domain Ami103574_RS15345 PF17158 Membrane-associated sensor, integral membrane domain Ami103574_RS15345 PF00990 Diguanylate cyclase, GGDEF domain Ami103574_RS15350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Ami103574_RS15350 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Ami103574_RS15355 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ami103574_RS15355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami103574_RS15360 PF00231 ATP synthase Ami103574_RS15365 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ami103574_RS15365 PF00306 ATP synthase alpha/beta chain, C terminal domain Ami103574_RS15365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami103574_RS15370 PF00213 ATP synthase delta (OSCP) subunit Ami103574_RS15375 PF00430 ATP synthase B/B' CF(0) Ami103574_RS15380 PF00137 ATP synthase subunit C Ami103574_RS15385 PF00119 ATP synthase A chain Ami103574_RS15395 PF01554 MatE Ami103574_RS15400 PF02350 UDP-N-acetylglucosamine 2-epimerase Ami103574_RS15405 PF00953 Glycosyl transferase family 4 Ami103574_RS15410 PF14437 MafB19-like deaminase Ami103574_RS15415 PF01416 tRNA pseudouridine synthase Ami103574_RS15420 PF01985 CRS1 / YhbY (CRM) domain Ami103574_RS15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS15425 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS15425 PF00072 Response regulator receiver domain Ami103574_RS15425 PF09308 LuxQ, periplasmic Ami103574_RS15430 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Ami103574_RS15430 PF00749 tRNA synthetases class I (E and Q), catalytic domain Ami103574_RS15435 PF04127 DNA / pantothenate metabolism flavoprotein Ami103574_RS15435 PF02441 Flavoprotein Ami103574_RS15445 PF00005 ABC transporter Ami103574_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS15455 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami103574_RS15465 PF02803 Thiolase, C-terminal domain Ami103574_RS15465 PF00108 Thiolase, N-terminal domain Ami103574_RS15475 PF01975 Survival protein SurE Ami103574_RS15485 PF00512 His Kinase A (phospho-acceptor) domain Ami103574_RS15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami103574_RS15485 PF00989 PAS fold Ami103574_RS15485 PF16736 Single Cache-like Ami103574_RS15490 PF00072 Response regulator receiver domain Ami103574_RS15490 PF00486 Transcriptional regulatory protein, C terminal Ami103574_RS15495 PF01895 PhoU domain Ami103574_RS15500 PF00005 ABC transporter Ami103574_RS15505 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS15510 PF00528 Binding-protein-dependent transport system inner membrane component Ami103574_RS15515 PF12849 PBP superfamily domain Ami103574_RS15520 PF02146 Sir2 family Ami103574_RS15525 PF02361 Cobalt transport protein Ami103574_RS15530 PF00005 ABC transporter Ami103574_RS15535 PF01891 Cobalt uptake substrate-specific transmembrane region Ami103574_RS15545 PF02887 Pyruvate kinase, alpha/beta domain Ami103574_RS15545 PF00224 Pyruvate kinase, barrel domain Ami103574_RS15565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ami103574_RS15565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ami103574_RS15575 PF00158 Sigma-54 interaction domain Ami103574_RS15575 PF00072 Response regulator receiver domain Ami103574_RS15575 PF02954 Bacterial regulatory protein, Fis family Ami103574_RS15620 PF13276 HTH-like domain Ami103574_RS15620 PF00665 Integrase core domain Ami103574_RS15620 PF13333 Integrase core domain