locus-tag	class	description
Ami103574_RS00005	COG0833	amino acid
Ami103574_RS00015	COG0019	diaminopimelate decarboxylase activity
Ami103574_RS00020	COG2204	response regulator
Ami103574_RS00035	COG2807	transmembrane transport
Ami103574_RS00115	COG0305	Participates in initiation and elongation during chromosome replication
Ami103574_RS00160	COG1725	Transcriptional regulator
Ami103574_RS00165	COG1131	(ABC) transporter
Ami103574_RS00175	COG0010	Belongs to the arginase family
Ami103574_RS00180	COG0833	amino acid
Ami103574_RS00185	COG3829	transcription factor binding
Ami103574_RS00250	COG2878	Part of a membrane complex involved in electron transport
Ami103574_RS00250	COG1245	4Fe-4S binding domain
Ami103574_RS00255	COG4657	Part of a membrane complex involved in electron transport
Ami103574_RS00260	COG4660	Part of a membrane complex involved in electron transport
Ami103574_RS00265	COG4659	FMN binding
Ami103574_RS00270	COG4658	electron transport chain
Ami103574_RS00275	COG4656	Part of a membrane complex involved in electron transport
Ami103574_RS00280	COG0583	DNA-binding transcription factor activity
Ami103574_RS00285	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS00290	COG0640	Transcriptional regulator
Ami103574_RS00295	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
Ami103574_RS00300	COG2357	RelA SpoT domain protein
Ami103574_RS00335	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Ami103574_RS00345	COG1615	UPF0182 protein
Ami103574_RS00385	COG3290	protein histidine kinase activity
Ami103574_RS00385	COG3829	transcription factor binding
Ami103574_RS00395	COG0280	phosphate acetyltransferase
Ami103574_RS00400	COG3246	L-lysine catabolic process to acetate
Ami103574_RS00405	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Ami103574_RS00415	COG2610	gluconate transmembrane transporter activity
Ami103574_RS00420	COG1250	3-hydroxyacyl-CoA dehydrogenase
Ami103574_RS00425	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Ami103574_RS00425	COG2199	diguanylate cyclase activity
Ami103574_RS00430	COG0582	viral genome integration into host DNA
Ami103574_RS00435	COG2814	Major facilitator Superfamily
Ami103574_RS00440	COG0765	amino acid transport
Ami103574_RS00445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Ami103574_RS00450	COG0626	cystathionine gamma-synthase activity
Ami103574_RS00455	COG1126	abc transporter atp-binding protein
Ami103574_RS00470	COG4978	Transcriptional regulator
Ami103574_RS00470	COG0789	Transcriptional regulator
Ami103574_RS00475	COG1811	Na channel or pump
Ami103574_RS00480	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Ami103574_RS00510	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
Ami103574_RS00515	COG1773	rubredoxin
Ami103574_RS00520	COG0426	domain, Protein
Ami103574_RS00525	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
Ami103574_RS00540	COG0840	transmembrane signaling receptor activity
Ami103574_RS00545	COG2827	Endonuclease containing a URI domain
Ami103574_RS00550	COG0835	chemotaxis
Ami103574_RS00550	COG0784	Response regulator, receiver
Ami103574_RS00555	COG3457	Alanine racemase
Ami103574_RS00565	COG5012	cobalamin binding
Ami103574_RS00575	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Ami103574_RS00585	COG3804	dihydrodipicolinate reductase
Ami103574_RS00590	COG3829	transcription factor binding
Ami103574_RS00615	COG2200	EAL domain
Ami103574_RS00630	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Ami103574_RS00655	COG0328	RNA-DNA hybrid ribonuclease activity
Ami103574_RS00660	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Ami103574_RS00665	COG2076	Multidrug Resistance protein
Ami103574_RS00690	COG1725	Transcriptional regulator
Ami103574_RS00700	COG0577	efflux transmembrane transporter activity
Ami103574_RS00705	COG1136	(ABC) transporter
Ami103574_RS00710	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ami103574_RS00720	COG1475	DNA binding
Ami103574_RS00725	COG1192	Involved in chromosome partitioning
Ami103574_RS00735	COG0357	Ribosomal RNA small subunit methyltransferase G
Ami103574_RS00740	COG0445	tRNA wobble uridine modification
Ami103574_RS00745	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Ami103574_RS00750	COG1847	R3H domain protein
Ami103574_RS00755	COG0706	membrane insertase activity
Ami103574_RS00760	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
Ami103574_RS00770	COG0230	Belongs to the bacterial ribosomal protein bL34 family
Ami103574_RS00780	COG0592	DNA-directed DNA polymerase activity
Ami103574_RS00790	COG0187	DNA topoisomerase II activity
Ami103574_RS00795	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
Ami103574_RS00800	COG2172	sigma factor antagonist activity
Ami103574_RS00805	COG1191	sigma factor activity
Ami103574_RS00810	COG0180	Tryptophanyl-tRNA synthetase
Ami103574_RS00825	COG0671	phosphoesterase, PA-phosphatase related
Ami103574_RS00830	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
Ami103574_RS00845	COG0183	Belongs to the thiolase family
Ami103574_RS00850	COG1979	alcohol dehydrogenase
Ami103574_RS00865	COG3246	L-lysine catabolic process to acetate
Ami103574_RS00880	COG1250	3-hydroxyacyl-CoA dehydrogenase
Ami103574_RS00890	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
Ami103574_RS00895	COG0583	DNA-binding transcription factor activity
Ami103574_RS00910	COG1606	tRNA processing
Ami103574_RS00930	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Ami103574_RS00935	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Ami103574_RS00940	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Ami103574_RS00950	COG2205	protein histidine kinase activity
Ami103574_RS00955	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS00985	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ami103574_RS00985	COG1116	anion transmembrane transporter activity
Ami103574_RS00990	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ami103574_RS01000	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
Ami103574_RS01010	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Ami103574_RS01015	COG0626	cystathionine gamma-synthase activity
Ami103574_RS01020	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Ami103574_RS01060	COG0386	Belongs to the glutathione peroxidase family
Ami103574_RS01065	COG1846	Transcriptional regulator
Ami103574_RS01085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Ami103574_RS01090	COG0360	Binds together with S18 to 16S ribosomal RNA
Ami103574_RS01095	COG0629	single-stranded DNA binding
Ami103574_RS01100	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Ami103574_RS01115	COG0248	Ppx GppA phosphatase
Ami103574_RS01120	COG2199	diguanylate cyclase activity
Ami103574_RS01120	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Ami103574_RS01125	COG0840	transmembrane signaling receptor activity
Ami103574_RS01130	COG0582	viral genome integration into host DNA
Ami103574_RS01140	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
Ami103574_RS01145	COG0359	binds to the 23S rRNA
Ami103574_RS01150	COG0305	Participates in initiation and elongation during chromosome replication
Ami103574_RS01160	COG0739	heme binding
Ami103574_RS01170	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ami103574_RS01170	COG1773	rubredoxin
Ami103574_RS01175	COG1592	Rubrerythrin
Ami103574_RS01195	COG3608	succinylglutamate desuccinylase aspartoacylase
Ami103574_RS01215	COG0444	Belongs to the ABC transporter superfamily
Ami103574_RS01220	COG4608	Belongs to the ABC transporter superfamily
Ami103574_RS01225	COG0534	Mate efflux family protein
Ami103574_RS01235	COG3118	belongs to the thioredoxin family
Ami103574_RS01260	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Ami103574_RS01265	COG2873	o-acetylhomoserine
Ami103574_RS01270	COG2207	Transcriptional regulator
Ami103574_RS01270	COG4753	response regulator
Ami103574_RS01280	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ami103574_RS01285	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ami103574_RS01295	COG1882	Formate acetyltransferase
Ami103574_RS01300	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Ami103574_RS01305	COG1404	Belongs to the peptidase S8 family
Ami103574_RS01310	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS01315	COG5002	protein histidine kinase activity
Ami103574_RS01335	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
Ami103574_RS01340	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Ami103574_RS01350	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Ami103574_RS01370	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Ami103574_RS01375	COG0251	oxidation-reduction process
Ami103574_RS01380	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Ami103574_RS01390	COG0710	3-dehydroquinate dehydratase activity
Ami103574_RS01395	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Ami103574_RS01400	COG0077	Prephenate dehydratase
Ami103574_RS01400	COG1605	Chorismate mutase
Ami103574_RS01405	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Ami103574_RS01410	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Ami103574_RS01415	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Ami103574_RS01420	COG0287	Prephenate dehydrogenase
Ami103574_RS01425	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Ami103574_RS01430	COG5002	protein histidine kinase activity
Ami103574_RS01430	COG5001	Diguanylate cyclase
Ami103574_RS01430	COG3447	MASE1 domain protein
Ami103574_RS01440	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Ami103574_RS01445	COG0066	3-isopropylmalate dehydratase activity
Ami103574_RS01450	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Ami103574_RS01455	COG0066	3-isopropylmalate dehydratase activity
Ami103574_RS01460	COG0473	3-isopropylmalate dehydrogenase activity
Ami103574_RS01465	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Ami103574_RS01470	COG0028	Belongs to the TPP enzyme family
Ami103574_RS01475	COG0440	acetolactate synthase activity
Ami103574_RS01480	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Ami103574_RS01485	COG0129	dihydroxy-acid dehydratase activity
Ami103574_RS01520	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Ami103574_RS01525	COG2226	methyltransferase
Ami103574_RS01535	COG1132	(ABC) transporter
Ami103574_RS01540	COG0601	transmembrane transport
Ami103574_RS01550	COG0444	Belongs to the ABC transporter superfamily
Ami103574_RS01555	COG4608	Belongs to the ABC transporter superfamily
Ami103574_RS01560	COG0747	negative chemotaxis
Ami103574_RS01565	COG2986	histidine ammonia-lyase
Ami103574_RS01575	COG1228	amidohydrolase
Ami103574_RS01595	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Ami103574_RS01610	COG1114	Component of the transport system for branched-chain amino acids
Ami103574_RS01615	COG2233	PERMEase
Ami103574_RS01640	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
Ami103574_RS01645	COG2223	nitrite transmembrane transporter activity
Ami103574_RS01650	COG2936	dipeptidyl-peptidase activity
Ami103574_RS01655	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Ami103574_RS01685	COG1136	(ABC) transporter
Ami103574_RS01685	COG0577	efflux transmembrane transporter activity
Ami103574_RS01695	COG3266	domain, Protein
Ami103574_RS01695	COG2911	Protein conserved in bacteria
Ami103574_RS01695	COG1361	Conserved repeat domain
Ami103574_RS01750	COG0840	transmembrane signaling receptor activity
Ami103574_RS01760	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ami103574_RS01770	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Ami103574_RS01795	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ami103574_RS01800	COG1228	amidohydrolase
Ami103574_RS01815	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Ami103574_RS01820	COG1802	Transcriptional regulator
Ami103574_RS01825	COG1776	CheC inhibitor of MCP methylation
Ami103574_RS01825	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Ami103574_RS01845	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Ami103574_RS01850	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Ami103574_RS01855	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Ami103574_RS01870	COG0793	Belongs to the peptidase S41A family
Ami103574_RS01875	COG4868	Belongs to the UPF0371 family
Ami103574_RS01915	COG2373	Large extracellular alpha-helical protein
Ami103574_RS01925	COG3266	domain, Protein
Ami103574_RS01925	COG1361	Conserved repeat domain
Ami103574_RS01925	COG2911	Protein conserved in bacteria
Ami103574_RS01935	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Ami103574_RS01940	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Ami103574_RS01940	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Ami103574_RS01945	COG0728	peptidoglycan biosynthetic process
Ami103574_RS01960	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
Ami103574_RS01970	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Ami103574_RS01975	COG0110	maltose O-acetyltransferase activity
Ami103574_RS01980	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Ami103574_RS02005	COG0438	transferase activity, transferring glycosyl groups
Ami103574_RS02015	COG1088	dTDP-glucose 4,6-dehydratase activity
Ami103574_RS02025	COG1134	teichoic acid transport
Ami103574_RS02035	COG1216	Glycosyl transferase, family 2
Ami103574_RS02055	COG0110	maltose O-acetyltransferase activity
Ami103574_RS02065	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Ami103574_RS02080	COG1216	Glycosyl transferase, family 2
Ami103574_RS02080	COG1442	glycosyl transferase family 8
Ami103574_RS02095	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Ami103574_RS02130	COG0166	Belongs to the GPI family
Ami103574_RS02135	COG1250	3-hydroxyacyl-CoA dehydrogenase
Ami103574_RS02145	COG1316	TRANSCRIPTIONal
Ami103574_RS02155	COG3872	metal-dependent enzyme
Ami103574_RS02160	COG2890	protein-(glutamine-N5) methyltransferase activity
Ami103574_RS02170	COG0254	rRNA binding
Ami103574_RS02175	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Ami103574_RS02180	COG0009	L-threonylcarbamoyladenylate synthase
Ami103574_RS02185	COG0698	ribose 5-phosphate isomerase
Ami103574_RS02195	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Ami103574_RS02200	COG1136	(ABC) transporter
Ami103574_RS02210	COG0577	efflux transmembrane transporter activity
Ami103574_RS02210	COG1136	(ABC) transporter
Ami103574_RS02220	COG5002	protein histidine kinase activity
Ami103574_RS02225	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Ami103574_RS02225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Ami103574_RS02230	COG3481	metal-dependent phosphohydrolase, HD sub domain
Ami103574_RS02235	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Ami103574_RS02240	COG1040	competence protein
Ami103574_RS02250	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
Ami103574_RS02260	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Ami103574_RS02275	COG3829	transcription factor binding
Ami103574_RS02280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ami103574_RS02300	COG1473	amidohydrolase
Ami103574_RS02305	COG0531	amino acid
Ami103574_RS02325	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Ami103574_RS02335	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Ami103574_RS02340	COG0726	polysaccharide deacetylase
Ami103574_RS02350	COG1803	Methylglyoxal synthase
Ami103574_RS02365	COG1396	sequence-specific DNA binding
Ami103574_RS02370	COG1396	sequence-specific DNA binding
Ami103574_RS02385	COG2359	stage V sporulation protein S
Ami103574_RS02395	COG1484	DNA-dependent DNA replication
Ami103574_RS02460	COG0629	single-stranded DNA binding
Ami103574_RS02655	COG1595	DNA-templated transcription, initiation
Ami103574_RS02710	COG2088	sporulation resulting in formation of a cellular spore
Ami103574_RS02720	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Ami103574_RS02805	COG2207	Transcriptional regulator
Ami103574_RS02850	COG0798	PFAM Bile acid sodium symporter
Ami103574_RS02875	COG0741	lytic transglycosylase activity
Ami103574_RS02875	COG0791	NLP P60 protein
Ami103574_RS02960	COG2720	vancomycin resistance protein
Ami103574_RS02965	COG1181	Belongs to the D-alanine--D-alanine ligase family
Ami103574_RS02990	COG2337	Toxic component of a toxin-antitoxin (TA) module
Ami103574_RS03035	COG4932	domain protein
Ami103574_RS03035	COG5492	domain, Protein
Ami103574_RS03040	COG0840	transmembrane signaling receptor activity
Ami103574_RS03060	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Ami103574_RS03065	COG1971	Probably functions as a manganese efflux pump
Ami103574_RS03080	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Ami103574_RS03090	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
Ami103574_RS03095	COG1686	Belongs to the peptidase S11 family
Ami103574_RS03100	COG0322	excinuclease ABC activity
Ami103574_RS03105	COG3906	Belongs to the UPF0473 family
Ami103574_RS03115	COG1558	bacterial-type flagellum-dependent cell motility
Ami103574_RS03125	COG1766	The M ring may be actively involved in energy transduction
Ami103574_RS03130	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Ami103574_RS03140	COG1157	protein secretion by the type III secretion system
Ami103574_RS03165	COG4786	Flagellar basal body rod
Ami103574_RS03175	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Ami103574_RS03180	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Ami103574_RS03180	COG1776	CheC inhibitor of MCP methylation
Ami103574_RS03185	COG2201	protein-glutamate methylesterase activity
Ami103574_RS03195	COG1338	Plays a role in the flagellum-specific transport system
Ami103574_RS03210	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Ami103574_RS03235	COG4786	Flagellar basal body rod
Ami103574_RS03235	COG1256	bacterial-type flagellum assembly
Ami103574_RS03250	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
Ami103574_RS03255	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
Ami103574_RS03275	COG2201	protein-glutamate methylesterase activity
Ami103574_RS03290	COG3693	PFAM glycoside hydrolase, family 10
Ami103574_RS03295	COG1815	bacterial-type flagellum-dependent cell motility
Ami103574_RS03300	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Ami103574_RS03305	COG1191	sigma factor activity
Ami103574_RS03310	COG4786	Flagellar basal body rod
Ami103574_RS03315	COG4786	Flagellar basal body rod
Ami103574_RS03325	COG1776	CheC inhibitor of MCP methylation
Ami103574_RS03340	COG1192	Involved in chromosome partitioning
Ami103574_RS03345	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
Ami103574_RS03360	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Ami103574_RS03390	COG0693	protein deglycase activity
Ami103574_RS03395	COG0613	PHP domain protein
Ami103574_RS03405	COG2155	Conserved Protein
Ami103574_RS03410	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Ami103574_RS03415	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Ami103574_RS03420	COG0051	transcription antitermination factor activity, RNA binding
Ami103574_RS03430	COG0088	Forms part of the polypeptide exit tunnel
Ami103574_RS03435	COG0089	rRNA binding
Ami103574_RS03440	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Ami103574_RS03445	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Ami103574_RS03450	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Ami103574_RS03455	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Ami103574_RS03460	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Ami103574_RS03465	COG0255	Belongs to the universal ribosomal protein uL29 family
Ami103574_RS03470	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Ami103574_RS03475	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Ami103574_RS03480	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Ami103574_RS03485	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Ami103574_RS03490	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Ami103574_RS03495	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Ami103574_RS03505	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Ami103574_RS03510	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Ami103574_RS03515	COG1841	ribosomal large subunit assembly
Ami103574_RS03520	COG0200	Binds to the 23S rRNA
Ami103574_RS03525	COG0201	protein transport
Ami103574_RS03530	COG0563	adenylate kinase activity
Ami103574_RS03540	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Ami103574_RS03545	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Ami103574_RS03550	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Ami103574_RS03555	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Ami103574_RS03560	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Ami103574_RS03565	COG0202	RNA polymerase activity
Ami103574_RS03570	COG0203	ribosomal protein L17
Ami103574_RS03575	COG1122	ATPase activity
Ami103574_RS03580	COG1122	ATPase activity
Ami103574_RS03585	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
Ami103574_RS03595	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Ami103574_RS03620	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
Ami103574_RS03625	COG1288	antiporter activity
Ami103574_RS03635	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
Ami103574_RS03645	COG0674	pyruvate-flavodoxin oxidoreductase activity
Ami103574_RS03645	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Ami103574_RS03645	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Ami103574_RS03645	COG1013	pyruvate-flavodoxin oxidoreductase activity
Ami103574_RS03655	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
Ami103574_RS03655	COG0493	'glutamate synthase
Ami103574_RS03660	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Ami103574_RS03665	COG1827	regulation of RNA biosynthetic process
Ami103574_RS03670	COG1473	amidohydrolase
Ami103574_RS03680	COG0484	heat shock protein binding
Ami103574_RS03690	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Ami103574_RS03705	COG1404	Belongs to the peptidase S8 family
Ami103574_RS03715	COG3279	Response regulator of the LytR AlgR family
Ami103574_RS03750	COG0544	peptidyl-prolyl cis-trans isomerase activity
Ami103574_RS03755	COG0740	serine-type endopeptidase activity
Ami103574_RS03760	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Ami103574_RS03765	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Ami103574_RS03770	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Ami103574_RS03785	COG4869	propanediol catabolic process
Ami103574_RS03850	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Ami103574_RS03855	COG2385	sporulation resulting in formation of a cellular spore
Ami103574_RS03870	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Ami103574_RS03915	COG1342	Belongs to the UPF0251 family
Ami103574_RS03920	COG0840	transmembrane signaling receptor activity
Ami103574_RS03925	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Ami103574_RS03935	COG3706	GGDEF domain
Ami103574_RS03960	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
Ami103574_RS03990	COG5002	protein histidine kinase activity
Ami103574_RS03995	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS04015	COG1388	LysM domain
Ami103574_RS04015	COG3858	chitin binding
Ami103574_RS04030	COG0551	DNA topoisomerase type I activity
Ami103574_RS04030	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Ami103574_RS04040	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
Ami103574_RS04050	COG0646	methionine synthase
Ami103574_RS04050	COG1410	methionine synthase
Ami103574_RS04055	COG0488	(ABC) transporter
Ami103574_RS04060	COG1132	(ABC) transporter
Ami103574_RS04065	COG1132	(ABC) transporter
Ami103574_RS04080	COG1408	metallophosphoesterase
Ami103574_RS04090	COG1595	DNA-templated transcription, initiation
Ami103574_RS04100	COG1131	(ABC) transporter
Ami103574_RS04145	COG4115	mRNA cleavage
Ami103574_RS04195	COG3266	domain, Protein
Ami103574_RS04195	COG2911	Protein conserved in bacteria
Ami103574_RS04195	COG1361	Conserved repeat domain
Ami103574_RS04240	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Ami103574_RS04290	COG2359	stage V sporulation protein S
Ami103574_RS04295	COG2002	toxin-antitoxin pair type II binding
Ami103574_RS04510	COG5492	domain, Protein
Ami103574_RS04510	COG4932	domain protein
Ami103574_RS04535	COG3546	catalase activity
Ami103574_RS04605	COG3299	homolog of phage Mu protein gp47
Ami103574_RS04640	COG4942	peptidase
Ami103574_RS04660	COG0708	Exodeoxyribonuclease III
Ami103574_RS04690	COG3655	Transcriptional regulator
Ami103574_RS04710	COG0824	Thioesterase
Ami103574_RS04715	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Ami103574_RS04720	COG0583	DNA-binding transcription factor activity
Ami103574_RS04745	COG0531	amino acid
Ami103574_RS04760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ami103574_RS04770	COG0693	protein deglycase activity
Ami103574_RS04790	COG3328	transposase activity
Ami103574_RS04815	COG1857	crispr-associated protein
Ami103574_RS04830	COG1518	maintenance of DNA repeat elements
Ami103574_RS04835	COG2176	DNA-directed DNA polymerase activity
Ami103574_RS04860	COG2226	methyltransferase
Ami103574_RS04865	COG5001	Diguanylate cyclase
Ami103574_RS04870	COG1733	regulation of RNA biosynthetic process
Ami103574_RS04885	COG0277	FAD linked oxidase domain protein
Ami103574_RS04890	COG1846	Transcriptional regulator
Ami103574_RS04900	COG0275	rRNA processing
Ami103574_RS04905	COG3246	L-lysine catabolic process to acetate
Ami103574_RS04910	COG0583	DNA-binding transcription factor activity
Ami103574_RS04915	COG0183	Belongs to the thiolase family
Ami103574_RS04940	COG0493	'glutamate synthase
Ami103574_RS04940	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Ami103574_RS04950	COG0431	NADPH-dependent FMN reductase
Ami103574_RS04950	COG1053	succinate dehydrogenase
Ami103574_RS04950	COG3976	FMN-binding domain protein
Ami103574_RS04980	COG1028	Short-chain dehydrogenase reductase Sdr
Ami103574_RS04995	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Ami103574_RS05015	COG0789	Transcriptional regulator
Ami103574_RS05040	COG0577	efflux transmembrane transporter activity
Ami103574_RS05040	COG1136	(ABC) transporter
Ami103574_RS05045	COG2205	protein histidine kinase activity
Ami103574_RS05050	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS05055	COG1846	Transcriptional regulator
Ami103574_RS05070	COG2226	methyltransferase
Ami103574_RS05075	COG1959	2 iron, 2 sulfur cluster binding
Ami103574_RS05085	COG1132	(ABC) transporter
Ami103574_RS05105	COG2094	Belongs to the DNA glycosylase MPG family
Ami103574_RS05125	COG3695	enzyme binding
Ami103574_RS05135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ami103574_RS05140	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
Ami103574_RS05145	COG1687	branched-chain amino acid
Ami103574_RS05160	COG1733	regulation of RNA biosynthetic process
Ami103574_RS05165	COG0531	amino acid
Ami103574_RS05185	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Ami103574_RS05190	COG1360	Flagellar Motor Protein
Ami103574_RS05200	COG1113	amino acid transport
Ami103574_RS05220	COG2508	Transcriptional regulator
Ami103574_RS05230	COG1361	Conserved repeat domain
Ami103574_RS05245	COG1691	(AIR) carboxylase
Ami103574_RS05255	COG3620	sequence-specific DNA binding
Ami103574_RS05275	COG0789	Transcriptional regulator
Ami103574_RS05290	COG1116	anion transmembrane transporter activity
Ami103574_RS05295	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ami103574_RS05300	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ami103574_RS05305	COG0739	heme binding
Ami103574_RS05310	COG0598	Magnesium transport protein CorA
Ami103574_RS05315	COG1151	hydroxylamine reductase activity
Ami103574_RS05355	COG3842	ATPase activity
Ami103574_RS05360	COG1176	ABC-type spermidine putrescine transport system, permease component I
Ami103574_RS05365	COG1177	transmembrane transport
Ami103574_RS05370	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
Ami103574_RS05375	COG0288	reversible hydration of carbon dioxide
Ami103574_RS05380	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ami103574_RS05385	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ami103574_RS05390	COG1116	anion transmembrane transporter activity
Ami103574_RS05395	COG0084	hydrolase, TatD family'
Ami103574_RS05415	COG3279	Response regulator of the LytR AlgR family
Ami103574_RS05420	COG5492	domain, Protein
Ami103574_RS05430	COG0024	Methionine aminopeptidase
Ami103574_RS05450	COG0346	lactoylglutathione lyase activity
Ami103574_RS05475	COG3443	Belongs to the bacterial solute-binding protein 9 family
Ami103574_RS05475	COG0803	Belongs to the bacterial solute-binding protein 9 family
Ami103574_RS05480	COG1121	(ABC) transporter
Ami103574_RS05485	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Ami103574_RS05500	COG5001	Diguanylate cyclase
Ami103574_RS05530	COG3829	transcription factor binding
Ami103574_RS05535	COG0833	amino acid
Ami103574_RS05540	COG4187	Peptidase family M20/M25/M40
Ami103574_RS05545	COG1132	(ABC) transporter
Ami103574_RS05550	COG1132	(ABC) transporter
Ami103574_RS05570	COG1331	Highly conserved protein containing a thioredoxin domain
Ami103574_RS05575	COG1331	Highly conserved protein containing a thioredoxin domain
Ami103574_RS05590	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS05600	COG0789	Transcriptional regulator
Ami103574_RS05600	COG4978	Transcriptional regulator
Ami103574_RS05630	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
Ami103574_RS05635	COG1012	belongs to the aldehyde dehydrogenase family
Ami103574_RS05635	COG1454	alcohol dehydrogenase
Ami103574_RS05640	COG1882	Formate acetyltransferase
Ami103574_RS05645	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Ami103574_RS05675	COG4656	Part of a membrane complex involved in electron transport
Ami103574_RS05695	COG1454	alcohol dehydrogenase
Ami103574_RS05695	COG1012	belongs to the aldehyde dehydrogenase family
Ami103574_RS05700	COG4869	propanediol catabolic process
Ami103574_RS05745	COG0583	DNA-binding transcription factor activity
Ami103574_RS05755	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
Ami103574_RS05770	COG2359	stage V sporulation protein S
Ami103574_RS05780	COG0488	(ABC) transporter
Ami103574_RS05785	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Ami103574_RS05790	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Ami103574_RS05805	COG4974	Belongs to the 'phage' integrase family
Ami103574_RS05815	COG0765	amino acid transport
Ami103574_RS05820	COG1126	abc transporter atp-binding protein
Ami103574_RS05840	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Ami103574_RS05845	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Ami103574_RS05850	COG2759	Belongs to the formate--tetrahydrofolate ligase family
Ami103574_RS05855	COG3404	Formiminotransferase-cyclodeaminase
Ami103574_RS05860	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Ami103574_RS05865	COG0113	porphobilinogen synthase activity
Ami103574_RS05870	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Ami103574_RS05880	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS05900	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Ami103574_RS05910	COG0181	hydroxymethylbilane synthase activity
Ami103574_RS05920	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Ami103574_RS05945	COG2226	methyltransferase
Ami103574_RS05950	COG1309	transcriptional regulator
Ami103574_RS05960	COG1476	TRANSCRIPTIONal
Ami103574_RS05980	COG0242	peptide deformylase activity
Ami103574_RS06005	COG2086	electron transfer activity
Ami103574_RS06010	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
Ami103574_RS06020	COG0436	Aminotransferase
Ami103574_RS06035	COG1132	(ABC) transporter
Ami103574_RS06040	COG3706	GGDEF domain
Ami103574_RS06055	COG0525	valine-tRNA ligase activity
Ami103574_RS06060	COG0285	dihydrofolate synthase activity
Ami103574_RS06065	COG1597	lipid kinase activity
Ami103574_RS06070	COG0482	sulfurtransferase activity
Ami103574_RS06080	COG0726	polysaccharide deacetylase
Ami103574_RS06090	COG1619	proteins homologs of microcin C7 resistance protein MccF
Ami103574_RS06095	COG0700	Nucleoside recognition
Ami103574_RS06100	COG2715	membrane protein required for spore maturation
Ami103574_RS06120	COG1473	amidohydrolase
Ami103574_RS06125	COG0833	amino acid
Ami103574_RS06130	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Ami103574_RS06135	COG1574	metal-dependent hydrolase with the TIM-barrel fold
Ami103574_RS06155	COG0416	fatty acid biosynthetic process
Ami103574_RS06160	COG0571	ribonuclease III activity
Ami103574_RS06165	COG1196	nuclear chromosome segregation
Ami103574_RS06170	COG0552	protein localization to endoplasmic reticulum
Ami103574_RS06175	COG1160	GTP binding
Ami103574_RS06180	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Ami103574_RS06185	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Ami103574_RS06190	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Ami103574_RS06215	COG0436	Aminotransferase
Ami103574_RS06240	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
Ami103574_RS06250	COG2814	Major facilitator Superfamily
Ami103574_RS06260	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
Ami103574_RS06265	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Ami103574_RS06270	COG1388	LysM domain
Ami103574_RS06270	COG0791	NLP P60 protein
Ami103574_RS06275	COG1994	Peptidase M50
Ami103574_RS06280	COG1733	regulation of RNA biosynthetic process
Ami103574_RS06285	COG0542	response to heat
Ami103574_RS06300	COG1121	(ABC) transporter
Ami103574_RS06305	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Ami103574_RS06325	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Ami103574_RS06330	COG2610	gluconate transmembrane transporter activity
Ami103574_RS06335	COG3246	L-lysine catabolic process to acetate
Ami103574_RS06340	COG1250	3-hydroxyacyl-CoA dehydrogenase
Ami103574_RS06360	COG0583	DNA-binding transcription factor activity
Ami103574_RS06385	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Ami103574_RS06400	COG2081	HI0933 family
Ami103574_RS06405	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
Ami103574_RS06410	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
Ami103574_RS06410	COG4124	Belongs to the glycosyl hydrolase 26 family
Ami103574_RS06425	COG2195	Cleaves the N-terminal amino acid of tripeptides
Ami103574_RS06440	COG4565	transcriptional regulatory protein
Ami103574_RS06455	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Ami103574_RS06500	COG3693	PFAM glycoside hydrolase, family 10
Ami103574_RS06520	COG1074	ATP-dependent DNA helicase activity
Ami103574_RS06530	COG4187	Peptidase family M20/M25/M40
Ami103574_RS06545	COG0616	signal peptide processing
Ami103574_RS06550	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
Ami103574_RS06555	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Ami103574_RS06560	COG0228	four-way junction DNA binding
Ami103574_RS06570	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Ami103574_RS06575	COG0336	Belongs to the RNA methyltransferase TrmD family
Ami103574_RS06585	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Ami103574_RS06590	COG1799	cell septum assembly
Ami103574_RS06600	COG3599	regulation of cell shape
Ami103574_RS06605	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Ami103574_RS06610	COG0564	pseudouridine synthase activity
Ami103574_RS06630	COG1561	YicC-like family, N-terminal region
Ami103574_RS06635	COG0194	GDP metabolic process
Ami103574_RS06640	COG1758	RNA polymerase activity
Ami103574_RS06650	COG0052	Belongs to the universal ribosomal protein uS2 family
Ami103574_RS06655	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Ami103574_RS06660	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Ami103574_RS06665	COG0528	UMP kinase activity
Ami103574_RS06670	COG0233	cytoplasmic translational termination
Ami103574_RS06675	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Ami103574_RS06680	COG0575	Belongs to the CDS family
Ami103574_RS06685	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Ami103574_RS06690	COG0750	zinc metalloprotease
Ami103574_RS06695	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Ami103574_RS06710	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
Ami103574_RS06720	COG0779	Required for maturation of 30S ribosomal subunits
Ami103574_RS06725	COG0195	Participates in both transcription termination and antitermination
Ami103574_RS06735	COG1358	cellular component organization or biogenesis
Ami103574_RS06740	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Ami103574_RS06745	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Ami103574_RS06750	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
Ami103574_RS06755	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Ami103574_RS06760	COG0196	riboflavin kinase activity
Ami103574_RS06765	COG4251	negative regulation of phosphorylation
Ami103574_RS06765	COG2203	Gaf domain
Ami103574_RS06765	COG3706	GGDEF domain
Ami103574_RS06765	COG5001	Diguanylate cyclase
Ami103574_RS06770	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Ami103574_RS06775	COG1185	polyribonucleotide nucleotidyltransferase activity
Ami103574_RS06780	COG1476	TRANSCRIPTIONal
Ami103574_RS06785	COG1368	sulfuric ester hydrolase activity
Ami103574_RS06795	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS06800	COG5002	protein histidine kinase activity
Ami103574_RS06805	COG1136	(ABC) transporter
Ami103574_RS06805	COG0577	efflux transmembrane transporter activity
Ami103574_RS06815	COG3275	phosphorelay sensor kinase activity
Ami103574_RS06820	COG3279	Response regulator of the LytR AlgR family
Ami103574_RS06835	COG0427	acetyl-CoA hydrolase
Ami103574_RS06895	COG1247	-acetyltransferase
Ami103574_RS06910	COG1131	(ABC) transporter
Ami103574_RS06935	COG3829	transcription factor binding
Ami103574_RS06940	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Ami103574_RS06945	COG0833	amino acid
Ami103574_RS06950	COG4187	Peptidase family M20/M25/M40
Ami103574_RS06960	COG1024	Enoyl-CoA hydratase
Ami103574_RS06975	COG0494	nUDIX hydrolase
Ami103574_RS06985	COG2205	protein histidine kinase activity
Ami103574_RS06985	COG0784	Response regulator, receiver
Ami103574_RS06990	COG3437	response regulator, receiver
Ami103574_RS07005	COG1285	pathogenesis
Ami103574_RS07015	COG0137	argininosuccinate synthase activity
Ami103574_RS07020	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Ami103574_RS07030	COG3457	Alanine racemase
Ami103574_RS07035	COG1660	Displays ATPase and GTPase activities
Ami103574_RS07040	COG3246	L-lysine catabolic process to acetate
Ami103574_RS07045	COG1481	regulation of sporulation
Ami103574_RS07050	COG2848	UPF0210 protein
Ami103574_RS07060	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Ami103574_RS07090	COG3279	Response regulator of the LytR AlgR family
Ami103574_RS07100	COG1361	Conserved repeat domain
Ami103574_RS07125	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Ami103574_RS07130	COG0438	transferase activity, transferring glycosyl groups
Ami103574_RS07170	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Ami103574_RS07175	COG0166	Belongs to the GPI family
Ami103574_RS07195	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Ami103574_RS07200	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
Ami103574_RS07205	COG1176	ABC-type spermidine putrescine transport system, permease component I
Ami103574_RS07210	COG1177	transmembrane transport
Ami103574_RS07215	COG3842	ATPase activity
Ami103574_RS07220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Ami103574_RS07225	COG1397	ADP-ribosylglycohydrolase
Ami103574_RS07235	COG0668	transmembrane transport
Ami103574_RS07240	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
Ami103574_RS07245	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ami103574_RS07250	COG2239	Acts as a magnesium transporter
Ami103574_RS07255	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Ami103574_RS07255	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Ami103574_RS07260	COG2337	Toxic component of a toxin-antitoxin (TA) module
Ami103574_RS07285	COG3959	Transketolase, thiamine diphosphate binding domain
Ami103574_RS07290	COG3958	Transketolase
Ami103574_RS07305	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Ami103574_RS07305	COG0512	Glutamine amidotransferase of anthranilate synthase
Ami103574_RS07310	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Ami103574_RS07315	COG0134	indole-3-glycerol-phosphate synthase activity
Ami103574_RS07325	COG0133	tryptophan synthase activity
Ami103574_RS07330	COG0159	tryptophan synthase activity
Ami103574_RS07345	COG2884	Cell division ATP-binding protein ftsE
Ami103574_RS07350	COG2177	Part of the ABC transporter FtsEX involved in
Ami103574_RS07355	COG0739	heme binding
Ami103574_RS07360	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
Ami103574_RS07360	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Ami103574_RS07375	COG3409	Peptidoglycan-binding domain 1 protein
Ami103574_RS07375	COG0793	Belongs to the peptidase S41A family
Ami103574_RS07380	COG2972	Histidine kinase
Ami103574_RS07385	COG2207	Transcriptional regulator
Ami103574_RS07430	COG4869	propanediol catabolic process
Ami103574_RS07440	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
Ami103574_RS07450	COG1012	belongs to the aldehyde dehydrogenase family
Ami103574_RS07455	COG4656	Part of a membrane complex involved in electron transport
Ami103574_RS07480	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
Ami103574_RS07485	COG4496	protein, YerC YecD
Ami103574_RS07495	COG2137	regulation of response to DNA damage stimulus
Ami103574_RS07510	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Ami103574_RS07515	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Ami103574_RS07525	COG0697	spore germination
Ami103574_RS07530	COG0494	nUDIX hydrolase
Ami103574_RS07535	COG2340	Cysteine-rich secretory protein family
Ami103574_RS07570	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
Ami103574_RS07575	COG1132	(ABC) transporter
Ami103574_RS07580	COG0617	tRNA 3'-terminal CCA addition
Ami103574_RS07590	COG2949	membrane
Ami103574_RS07615	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Ami103574_RS07615	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Ami103574_RS07675	COG1937	Protein conserved in bacteria
Ami103574_RS07685	COG0601	transmembrane transport
Ami103574_RS07690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Ami103574_RS07695	COG0444	Belongs to the ABC transporter superfamily
Ami103574_RS07700	COG1124	(ABC) transporter
Ami103574_RS07705	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Ami103574_RS07705	COG2111	Na H antiporter
Ami103574_RS07715	COG3260	NADH ubiquinone oxidoreductase 20
Ami103574_RS07725	COG0649	NAD binding
Ami103574_RS07745	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
Ami103574_RS07780	COG3340	Belongs to the peptidase S51 family
Ami103574_RS07785	COG2211	Major facilitator Superfamily
Ami103574_RS07790	COG0789	Transcriptional regulator
Ami103574_RS07790	COG4978	Transcriptional regulator
Ami103574_RS07795	COG2264	protein methyltransferase activity
Ami103574_RS07800	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Ami103574_RS07805	COG2033	superoxide reductase activity
Ami103574_RS07815	COG0726	polysaccharide deacetylase
Ami103574_RS07845	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Ami103574_RS07850	COG0537	adenosine 5'-monophosphoramidase activity
Ami103574_RS07855	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Ami103574_RS07865	COG1959	2 iron, 2 sulfur cluster binding
Ami103574_RS07885	COG1702	phosphate starvation-inducible protein PhoH
Ami103574_RS07890	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Ami103574_RS07895	COG0295	cytidine deaminase activity
Ami103574_RS07900	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Ami103574_RS07910	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Ami103574_RS07920	COG0574	Belongs to the PEP-utilizing enzyme family
Ami103574_RS07920	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Ami103574_RS07935	COG2720	vancomycin resistance protein
Ami103574_RS07955	COG0740	serine-type endopeptidase activity
Ami103574_RS07965	COG1283	sodium-dependent phosphate transmembrane transporter activity
Ami103574_RS07970	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS07975	COG5002	protein histidine kinase activity
Ami103574_RS07980	COG4651	solute:proton antiporter activity
Ami103574_RS07980	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Ami103574_RS08025	COG3829	transcription factor binding
Ami103574_RS08025	COG3290	protein histidine kinase activity
Ami103574_RS08030	COG2814	Major facilitator Superfamily
Ami103574_RS08035	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
Ami103574_RS08040	COG3246	L-lysine catabolic process to acetate
Ami103574_RS08055	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Ami103574_RS08060	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Ami103574_RS08060	COG0539	negative regulation of cytoplasmic translation
Ami103574_RS08065	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Ami103574_RS08070	COG0497	DNA recombination
Ami103574_RS08075	COG1438	arginine binding
Ami103574_RS08080	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Ami103574_RS08085	COG0632	four-way junction helicase activity
Ami103574_RS08095	COG2385	sporulation resulting in formation of a cellular spore
Ami103574_RS08105	COG0343	queuine tRNA-ribosyltransferase activity
Ami103574_RS08110	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Ami103574_RS08160	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS08180	COG2814	Major facilitator Superfamily
Ami103574_RS08205	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Ami103574_RS08215	COG2169	Transcriptional regulator
Ami103574_RS08225	COG1522	sequence-specific DNA binding
Ami103574_RS08235	COG2207	Transcriptional regulator
Ami103574_RS08235	COG3708	Transcriptional regulator
Ami103574_RS08265	COG0739	heme binding
Ami103574_RS08270	COG3693	PFAM glycoside hydrolase, family 10
Ami103574_RS08280	COG1366	Belongs to the anti-sigma-factor antagonist family
Ami103574_RS08285	COG2208	phosphoserine phosphatase activity
Ami103574_RS08300	COG2274	protein secretion by the type I secretion system
Ami103574_RS08310	COG0789	Transcriptional regulator
Ami103574_RS08330	COG1297	OPT oligopeptide transporter protein
Ami103574_RS08335	COG2195	Cleaves the N-terminal amino acid of tripeptides
Ami103574_RS08350	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Ami103574_RS08355	COG2972	Histidine kinase
Ami103574_RS08355	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS08360	COG3279	Response regulator of the LytR AlgR family
Ami103574_RS08370	COG0697	spore germination
Ami103574_RS08375	COG1917	Cupin 2, conserved barrel domain protein
Ami103574_RS08375	COG2207	Transcriptional regulator
Ami103574_RS08395	COG3384	dioxygenase
Ami103574_RS08400	COG1741	Belongs to the pirin family
Ami103574_RS08405	COG1162	GTPase activity
Ami103574_RS08425	COG0583	DNA-binding transcription factor activity
Ami103574_RS08450	COG1194	a g-specific adenine glycosylase
Ami103574_RS08455	COG3290	protein histidine kinase activity
Ami103574_RS08455	COG0840	transmembrane signaling receptor activity
Ami103574_RS08460	COG0840	transmembrane signaling receptor activity
Ami103574_RS08485	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Ami103574_RS08490	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Ami103574_RS08505	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Ami103574_RS08515	COG0742	ribosomal rna small subunit methyltransferase
Ami103574_RS08535	COG1323	Belongs to the UPF0348 family
Ami103574_RS08540	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Ami103574_RS08545	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Ami103574_RS08580	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Ami103574_RS08585	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Ami103574_RS08590	COG1058	Belongs to the CinA family
Ami103574_RS08590	COG1546	Belongs to the CinA family
Ami103574_RS08595	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Ami103574_RS08600	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Ami103574_RS08605	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Ami103574_RS08610	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Ami103574_RS08625	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Ami103574_RS08635	COG1555	photosystem II stabilization
Ami103574_RS08635	COG1596	polysaccharide export
Ami103574_RS08645	COG0750	zinc metalloprotease
Ami103574_RS08650	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS08655	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Ami103574_RS08670	COG1104	cysteine desulfurase activity
Ami103574_RS08705	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Ami103574_RS08710	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Ami103574_RS08715	COG1570	exodeoxyribonuclease VII activity
Ami103574_RS08725	COG0142	geranyltranstransferase activity
Ami103574_RS08730	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Ami103574_RS08735	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
Ami103574_RS08740	COG0436	Aminotransferase
Ami103574_RS08745	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Ami103574_RS08750	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Ami103574_RS08755	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Ami103574_RS08760	COG4974	Belongs to the 'phage' integrase family
Ami103574_RS08765	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
Ami103574_RS08770	COG0398	Pfam SNARE associated Golgi protein
Ami103574_RS08785	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Ami103574_RS08860	COG4472	Bacterial protein of unknown function (DUF965)
Ami103574_RS08865	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Ami103574_RS08890	COG3854	ATPases associated with a variety of cellular activities
Ami103574_RS08895	COG1253	flavin adenine dinucleotide binding
Ami103574_RS08905	COG4122	O-methyltransferase activity
Ami103574_RS08910	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Ami103574_RS08915	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Ami103574_RS08920	COG3679	Belongs to the UPF0342 family
Ami103574_RS08925	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
Ami103574_RS08930	COG0495	leucyl-tRNA aminoacylation
Ami103574_RS08935	COG0799	negative regulation of ribosome biogenesis
Ami103574_RS08940	COG1713	HD superfamily hydrolase involved in NAD metabolism
Ami103574_RS08955	COG0124	histidyl-tRNA synthetase
Ami103574_RS08960	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Ami103574_RS08965	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ami103574_RS08970	COG1490	D-aminoacyl-tRNA deacylase activity
Ami103574_RS08975	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Ami103574_RS08980	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Ami103574_RS08980	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Ami103574_RS08990	COG1862	Preprotein translocase
Ami103574_RS09010	COG0237	dephospho-CoA kinase activity
Ami103574_RS09015	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Ami103574_RS09015	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Ami103574_RS09030	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
Ami103574_RS09035	COG1253	flavin adenine dinucleotide binding
Ami103574_RS09040	COG0789	Transcriptional regulator
Ami103574_RS09045	COG1131	(ABC) transporter
Ami103574_RS09055	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Ami103574_RS09065	COG3191	aminopeptidase activity
Ami103574_RS09085	COG0217	transcriptional regulatory protein
Ami103574_RS09115	COG2384	SAM-dependent methyltransferase
Ami103574_RS09120	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
Ami103574_RS09125	COG0358	DNA primase activity
Ami103574_RS09130	COG0232	Belongs to the dGTPase family. Type 2 subfamily
Ami103574_RS09135	COG0306	phosphate transporter
Ami103574_RS09150	COG0693	protein deglycase activity
Ami103574_RS09150	COG0753	catalase activity
Ami103574_RS09160	COG1492	cobalamin metabolic process
Ami103574_RS09165	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Ami103574_RS09185	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
Ami103574_RS09190	COG1797	cobyrinic acid a,c-diamide synthase activity
Ami103574_RS09210	COG0612	Peptidase, M16
Ami103574_RS09215	COG0726	polysaccharide deacetylase
Ami103574_RS09230	COG1696	Membrane protein involved in D-alanine export
Ami103574_RS09270	COG0659	secondary active sulfate transmembrane transporter activity
Ami103574_RS09290	COG2268	Band 7 protein
Ami103574_RS09300	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
Ami103574_RS09325	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
Ami103574_RS09350	COG0006	proline dipeptidase activity
Ami103574_RS09365	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Ami103574_RS09375	COG1404	Belongs to the peptidase S8 family
Ami103574_RS09380	COG0419	ATPase involved in DNA repair
Ami103574_RS09385	COG0420	3'-5' exonuclease activity
Ami103574_RS09390	COG1649	PFAM Uncharacterised BCR, COG1649
Ami103574_RS09395	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Ami103574_RS09400	COG3153	acetyltransferase
Ami103574_RS09400	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Ami103574_RS09415	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Ami103574_RS09415	COG2199	diguanylate cyclase activity
Ami103574_RS09430	COG4475	Protein of unknown function (DUF436)
Ami103574_RS09470	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
Ami103574_RS09475	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Ami103574_RS09490	COG1022	Amp-dependent synthetase and ligase
Ami103574_RS09495	COG0813	purine-nucleoside phosphorylase activity
Ami103574_RS09500	COG0840	transmembrane signaling receptor activity
Ami103574_RS09510	COG4869	propanediol catabolic process
Ami103574_RS09515	COG1454	alcohol dehydrogenase
Ami103574_RS09515	COG1012	belongs to the aldehyde dehydrogenase family
Ami103574_RS09525	COG4656	Part of a membrane complex involved in electron transport
Ami103574_RS09530	COG1250	3-hydroxyacyl-CoA dehydrogenase
Ami103574_RS09535	COG4716	Myosin-crossreactive antigen
Ami103574_RS09540	COG0484	heat shock protein binding
Ami103574_RS09545	COG0443	Heat shock 70 kDa protein
Ami103574_RS09550	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Ami103574_RS09555	COG1420	regulation of RNA biosynthetic process
Ami103574_RS09560	COG0410	ABC transporter
Ami103574_RS09575	COG0559	Belongs to the binding-protein-dependent transport system permease family
Ami103574_RS09605	COG3655	Transcriptional regulator
Ami103574_RS09620	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Ami103574_RS09630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Ami103574_RS09645	COG0481	GTPase activity
Ami103574_RS09660	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
Ami103574_RS09665	COG0268	Binds directly to 16S ribosomal RNA
Ami103574_RS09670	COG1917	Cupin 2, conserved barrel domain protein
Ami103574_RS09670	COG2207	Transcriptional regulator
Ami103574_RS09685	COG2235	arginine
Ami103574_RS09690	COG3835	regulator
Ami103574_RS09700	COG0460	homoserine dehydrogenase
Ami103574_RS09705	COG3949	Membrane
Ami103574_RS09710	COG2962	Rard protein
Ami103574_RS09725	COG1164	Oligoendopeptidase f
Ami103574_RS09730	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Ami103574_RS09735	COG0564	pseudouridine synthase activity
Ami103574_RS09740	COG3706	GGDEF domain
Ami103574_RS09745	COG0346	lactoylglutathione lyase activity
Ami103574_RS09850	COG2323	membrane
Ami103574_RS09860	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
Ami103574_RS09865	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Ami103574_RS09870	COG2267	carboxylic ester hydrolase activity
Ami103574_RS09875	COG0776	regulation of translation
Ami103574_RS09880	COG3956	TIGRFAM MazG family protein
Ami103574_RS09890	COG0402	S-adenosylhomocysteine deaminase activity
Ami103574_RS09895	COG2002	toxin-antitoxin pair type II binding
Ami103574_RS09900	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Ami103574_RS09905	COG0193	aminoacyl-tRNA hydrolase activity
Ami103574_RS09915	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Ami103574_RS09920	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Ami103574_RS09925	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Ami103574_RS09930	COG2088	sporulation resulting in formation of a cellular spore
Ami103574_RS09935	COG0492	ferredoxin-NADP+ reductase activity
Ami103574_RS09940	COG3118	belongs to the thioredoxin family
Ami103574_RS09955	COG0741	lytic transglycosylase activity
Ami103574_RS09960	COG2252	PERMEase
Ami103574_RS09970	COG0768	penicillin binding
Ami103574_RS09985	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Ami103574_RS09995	COG1595	DNA-templated transcription, initiation
Ami103574_RS10000	COG0450	alkyl hydroperoxide reductase
Ami103574_RS10005	COG0697	spore germination
Ami103574_RS10015	COG2378	regulation of single-species biofilm formation
Ami103574_RS10020	COG0167	dihydroorotate dehydrogenase activity
Ami103574_RS10025	COG0543	2 iron, 2 sulfur cluster binding
Ami103574_RS10030	COG0284	orotidine-5'-phosphate decarboxylase activity
Ami103574_RS10035	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Ami103574_RS10050	COG0019	diaminopimelate decarboxylase activity
Ami103574_RS10095	COG1725	Transcriptional regulator
Ami103574_RS10100	COG1131	(ABC) transporter
Ami103574_RS10110	COG1982	Orn Lys Arg decarboxylase major
Ami103574_RS10115	COG2195	Cleaves the N-terminal amino acid of tripeptides
Ami103574_RS10120	COG2081	HI0933 family
Ami103574_RS10125	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ami103574_RS10145	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Ami103574_RS10145	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Ami103574_RS10155	COG1131	(ABC) transporter
Ami103574_RS10185	COG2205	protein histidine kinase activity
Ami103574_RS10190	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS10195	COG2608	mercury ion transmembrane transporter activity
Ami103574_RS10205	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS10215	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS10225	COG1136	(ABC) transporter
Ami103574_RS10230	COG2202	Pas domain
Ami103574_RS10230	COG2205	protein histidine kinase activity
Ami103574_RS10235	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS10310	COG1114	Component of the transport system for branched-chain amino acids
Ami103574_RS10325	COG1472	Belongs to the glycosyl hydrolase 3 family
Ami103574_RS10335	COG0789	Transcriptional regulator
Ami103574_RS10360	COG0789	Transcriptional regulator
Ami103574_RS10425	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Ami103574_RS10460	COG1013	pyruvate-flavodoxin oxidoreductase activity
Ami103574_RS10465	COG0674	pyruvate-flavodoxin oxidoreductase activity
Ami103574_RS10475	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Ami103574_RS10495	COG1489	DNA binding
Ami103574_RS10500	COG0352	thiamine-phosphate diphosphorylase activity
Ami103574_RS10500	COG0351	phosphomethylpyrimidine kinase
Ami103574_RS10505	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Ami103574_RS10515	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
Ami103574_RS10520	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Ami103574_RS10525	COG1686	Belongs to the peptidase S11 family
Ami103574_RS10535	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS10540	COG2205	protein histidine kinase activity
Ami103574_RS10560	COG0488	(ABC) transporter
Ami103574_RS10560	COG0488	(ABC) transporter
Ami103574_RS10565	COG0426	domain, Protein
Ami103574_RS10570	COG1960	acyl-CoA dehydrogenase activity
Ami103574_RS10585	COG0833	amino acid
Ami103574_RS10590	COG0784	Response regulator, receiver
Ami103574_RS10595	COG5002	protein histidine kinase activity
Ami103574_RS10600	COG0833	amino acid
Ami103574_RS10605	COG1012	belongs to the aldehyde dehydrogenase family
Ami103574_RS10645	COG3206	protein involved in exopolysaccharide biosynthesis
Ami103574_RS10655	COG1395	domain, Protein
Ami103574_RS10660	COG1396	sequence-specific DNA binding
Ami103574_RS10670	COG1396	sequence-specific DNA binding
Ami103574_RS10675	COG0232	Belongs to the dGTPase family. Type 2 subfamily
Ami103574_RS10685	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Ami103574_RS10745	COG2003	Belongs to the UPF0758 family
Ami103574_RS10960	COG1404	Belongs to the peptidase S8 family
Ami103574_RS10970	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Ami103574_RS10970	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Ami103574_RS10990	COG0281	malic enzyme
Ami103574_RS10995	COG1027	Aspartate ammonia-lyase
Ami103574_RS11000	COG0583	DNA-binding transcription factor activity
Ami103574_RS11015	COG0531	amino acid
Ami103574_RS11020	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Ami103574_RS11030	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ami103574_RS11040	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
Ami103574_RS11060	COG1024	Enoyl-CoA hydratase
Ami103574_RS11075	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Ami103574_RS11080	COG0095	Lipoate-protein ligase
Ami103574_RS11100	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Ami103574_RS11115	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ami103574_RS11130	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
Ami103574_RS11145	COG2333	competence protein COMEC
Ami103574_RS11145	COG0658	competence protein
Ami103574_RS11155	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
Ami103574_RS11160	COG1288	antiporter activity
Ami103574_RS11165	COG3829	transcription factor binding
Ami103574_RS11165	COG3290	protein histidine kinase activity
Ami103574_RS11190	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Ami103574_RS11200	COG0424	maF-like protein
Ami103574_RS11210	COG0281	malic enzyme
Ami103574_RS11215	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
Ami103574_RS11220	COG2086	electron transfer activity
Ami103574_RS11225	COG1960	acyl-CoA dehydrogenase activity
Ami103574_RS11245	COG0301	tRNA thio-modification
Ami103574_RS11255	COG1418	mRNA catabolic process
Ami103574_RS11260	COG0772	Belongs to the SEDS family
Ami103574_RS11265	COG2894	cell division
Ami103574_RS11285	COG1077	Cell shape determining protein MreB Mrl
Ami103574_RS11290	COG2003	Belongs to the UPF0758 family
Ami103574_RS11305	COG3300	MHYT domain
Ami103574_RS11305	COG5001	Diguanylate cyclase
Ami103574_RS11310	COG5001	Diguanylate cyclase
Ami103574_RS11310	COG3447	MASE1 domain protein
Ami103574_RS11310	COG5002	protein histidine kinase activity
Ami103574_RS11320	COG1126	abc transporter atp-binding protein
Ami103574_RS11325	COG4215	(ABC) transporter
Ami103574_RS11340	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Ami103574_RS11345	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Ami103574_RS11350	COG1873	PFAM PRC-barrel domain
Ami103574_RS11355	COG0544	peptidyl-prolyl cis-trans isomerase activity
Ami103574_RS11360	COG1191	sigma factor activity
Ami103574_RS11370	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Ami103574_RS11375	COG1748	Saccharopine dehydrogenase
Ami103574_RS11380	COG0493	'glutamate synthase
Ami103574_RS11385	COG0067	glutamate synthase
Ami103574_RS11385	COG0070	glutamate synthase
Ami103574_RS11385	COG0069	glutamate synthase activity
Ami103574_RS11400	COG1191	sigma factor activity
Ami103574_RS11415	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Ami103574_RS11420	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Ami103574_RS11425	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Ami103574_RS11435	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Ami103574_RS11440	COG0860	N-Acetylmuramoyl-L-alanine amidase
Ami103574_RS11440	COG2247	cell wall binding repeat
Ami103574_RS11445	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
Ami103574_RS11460	COG1357	PFAM Pentapeptide repeats (8 copies)
Ami103574_RS11475	COG0577	efflux transmembrane transporter activity
Ami103574_RS11475	COG1136	(ABC) transporter
Ami103574_RS11495	COG1136	(ABC) transporter
Ami103574_RS11500	COG0577	efflux transmembrane transporter activity
Ami103574_RS11500	COG1136	(ABC) transporter
Ami103574_RS11505	COG1136	(ABC) transporter
Ami103574_RS11505	COG0577	efflux transmembrane transporter activity
Ami103574_RS11515	COG3470	protein probably involved in high-affinity Fe2 transport
Ami103574_RS11520	COG0672	)-iron permease
Ami103574_RS11525	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ami103574_RS11530	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS11560	COG1454	alcohol dehydrogenase
Ami103574_RS11580	COG5002	protein histidine kinase activity
Ami103574_RS11580	COG3447	MASE1 domain protein
Ami103574_RS11580	COG5001	Diguanylate cyclase
Ami103574_RS11585	COG2199	diguanylate cyclase activity
Ami103574_RS11590	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Ami103574_RS11650	COG0488	(ABC) transporter
Ami103574_RS11680	COG3290	protein histidine kinase activity
Ami103574_RS11690	COG0772	Belongs to the SEDS family
Ami103574_RS11700	COG0583	DNA-binding transcription factor activity
Ami103574_RS11715	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Ami103574_RS11720	COG1162	GTPase activity
Ami103574_RS11725	COG2815	serine threonine protein kinase
Ami103574_RS11725	COG0515	serine threonine protein kinase
Ami103574_RS11735	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Ami103574_RS11735	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Ami103574_RS11740	COG2738	Putative neutral zinc metallopeptidase
Ami103574_RS11745	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Ami103574_RS11755	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Ami103574_RS11765	COG1242	4 iron, 4 sulfur cluster binding
Ami103574_RS11770	COG1435	thymidine kinase activity
Ami103574_RS11910	COG1739	Uncharacterized protein family UPF0029
Ami103574_RS11915	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Ami103574_RS11925	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
Ami103574_RS11930	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Ami103574_RS11935	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
Ami103574_RS11940	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Ami103574_RS11945	COG0758	DNA mediated transformation
Ami103574_RS11950	COG0606	chelatase, subunit chli
Ami103574_RS11955	COG0792	nuclease activity
Ami103574_RS11960	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Ami103574_RS11970	COG0561	phosphatase activity
Ami103574_RS11980	COG0569	domain protein
Ami103574_RS11980	COG0475	glutathione-regulated potassium exporter activity
Ami103574_RS11985	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Ami103574_RS11990	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Ami103574_RS11995	COG0517	IMP dehydrogenase activity
Ami103574_RS12000	COG0557	exoribonuclease II activity
Ami103574_RS12010	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Ami103574_RS12020	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Ami103574_RS12025	COG0148	phosphopyruvate hydratase activity
Ami103574_RS12035	COG0126	phosphoglycerate kinase activity
Ami103574_RS12040	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Ami103574_RS12045	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
Ami103574_RS12055	COG0460	homoserine dehydrogenase
Ami103574_RS12060	COG0653	protein targeting
Ami103574_RS12070	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Ami103574_RS12085	COG5012	cobalamin binding
Ami103574_RS12105	COG5012	cobalamin binding
Ami103574_RS12110	COG1917	Cupin 2, conserved barrel domain protein
Ami103574_RS12110	COG2207	Transcriptional regulator
Ami103574_RS12130	COG0840	transmembrane signaling receptor activity
Ami103574_RS12135	COG0840	transmembrane signaling receptor activity
Ami103574_RS12155	COG4974	Belongs to the 'phage' integrase family
Ami103574_RS12160	COG0732	type I restriction modification DNA specificity domain
Ami103574_RS12175	COG0840	transmembrane signaling receptor activity
Ami103574_RS12185	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Ami103574_RS12215	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Ami103574_RS12220	COG0473	3-isopropylmalate dehydrogenase activity
Ami103574_RS12225	COG1802	Transcriptional regulator
Ami103574_RS12235	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
Ami103574_RS12240	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Ami103574_RS12245	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Ami103574_RS12250	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Ami103574_RS12255	COG0131	Imidazoleglycerol-phosphate dehydratase
Ami103574_RS12265	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Ami103574_RS12270	COG0107	imidazoleglycerol-phosphate synthase activity
Ami103574_RS12275	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Ami103574_RS12275	COG0140	phosphoribosyl-ATP diphosphatase activity
Ami103574_RS12285	COG1476	TRANSCRIPTIONal
Ami103574_RS12290	COG0205	6-phosphofructokinase activity
Ami103574_RS12300	COG1288	antiporter activity
Ami103574_RS12315	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
Ami103574_RS12320	COG0833	amino acid
Ami103574_RS12325	COG1477	protein flavinylation
Ami103574_RS12355	COG1252	NADH dehydrogenase
Ami103574_RS12440	COG1401	restriction endodeoxyribonuclease activity
Ami103574_RS12455	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Ami103574_RS12465	COG3835	regulator
Ami103574_RS12470	COG0789	Transcriptional regulator
Ami103574_RS12470	COG4978	Transcriptional regulator
Ami103574_RS12475	COG1720	tRNA m6t6A37 methyltransferase activity
Ami103574_RS12485	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
Ami103574_RS12490	COG2223	nitrite transmembrane transporter activity
Ami103574_RS12495	COG1028	Short-chain dehydrogenase reductase Sdr
Ami103574_RS12505	COG1592	Rubrerythrin
Ami103574_RS12540	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Ami103574_RS12545	COG1882	Formate acetyltransferase
Ami103574_RS12575	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
Ami103574_RS12575	COG0457	Tetratricopeptide repeat
Ami103574_RS12585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Ami103574_RS12590	COG0018	arginyl-trna synthetase
Ami103574_RS12595	COG1683	Conserved Protein
Ami103574_RS12600	COG1193	negative regulation of DNA recombination
Ami103574_RS12605	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
Ami103574_RS12610	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ami103574_RS12610	COG0072	phenylalanine-tRNA ligase activity
Ami103574_RS12615	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Ami103574_RS12620	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Ami103574_RS12625	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Ami103574_RS12630	COG3856	small basic protein
Ami103574_RS12650	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Ami103574_RS12655	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Ami103574_RS12660	COG0772	Belongs to the SEDS family
Ami103574_RS12665	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Ami103574_RS12670	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Ami103574_RS12675	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Ami103574_RS12680	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Ami103574_RS12685	COG0768	penicillin binding
Ami103574_RS12695	COG0275	rRNA processing
Ami103574_RS12700	COG2001	Belongs to the MraZ family
Ami103574_RS12715	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ami103574_RS12720	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ami103574_RS12725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ami103574_RS12730	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Ami103574_RS12740	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Ami103574_RS12755	COG0012	GTP binding
Ami103574_RS12760	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Ami103574_RS12770	COG2002	toxin-antitoxin pair type II binding
Ami103574_RS12790	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
Ami103574_RS12795	COG1774	PSP1 C-terminal conserved region
Ami103574_RS12800	COG0470	DNA polymerase III
Ami103574_RS12805	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Ami103574_RS12840	COG0628	permease
Ami103574_RS12855	COG1802	Transcriptional regulator
Ami103574_RS12870	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Ami103574_RS12875	COG0505	Belongs to the CarA family
Ami103574_RS12885	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Ami103574_RS12890	COG0116	Belongs to the methyltransferase superfamily
Ami103574_RS12905	COG0726	polysaccharide deacetylase
Ami103574_RS12925	COG1609	Transcriptional regulator
Ami103574_RS12930	COG5001	Diguanylate cyclase
Ami103574_RS12955	COG1045	serine acetyltransferase
Ami103574_RS12965	COG1172	Belongs to the binding-protein-dependent transport system permease family
Ami103574_RS12970	COG1129	ABC transporter
Ami103574_RS12975	COG1869	D-ribose catabolic process
Ami103574_RS12980	COG1609	Transcriptional regulator
Ami103574_RS13005	COG0531	amino acid
Ami103574_RS13010	COG2204	response regulator
Ami103574_RS13015	COG5002	protein histidine kinase activity
Ami103574_RS13030	COG2814	Major facilitator Superfamily
Ami103574_RS13035	COG1566	PFAM secretion protein HlyD family protein
Ami103574_RS13050	COG3853	Toxic anion resistance protein (TelA)
Ami103574_RS13060	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Ami103574_RS13070	COG2217	Heavy metal translocating P-type atpase
Ami103574_RS13075	COG0477	Major facilitator Superfamily
Ami103574_RS13090	COG0017	Asparaginyl-tRNA synthetase
Ami103574_RS13095	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Ami103574_RS13105	COG3706	GGDEF domain
Ami103574_RS13125	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Ami103574_RS13130	COG0681	Belongs to the peptidase S26 family
Ami103574_RS13135	COG0681	Belongs to the peptidase S26 family
Ami103574_RS13160	COG0191	fructose-bisphosphate aldolase activity
Ami103574_RS13180	COG1528	Iron-storage protein
Ami103574_RS13185	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
Ami103574_RS13195	COG0556	nucleotide-excision repair
Ami103574_RS13200	COG0372	Belongs to the citrate synthase family
Ami103574_RS13230	COG1129	ABC transporter
Ami103574_RS13230	COG0842	Transport permease protein
Ami103574_RS13235	COG1013	pyruvate-flavodoxin oxidoreductase activity
Ami103574_RS13235	COG0674	pyruvate-flavodoxin oxidoreductase activity
Ami103574_RS13235	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Ami103574_RS13235	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Ami103574_RS13255	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Ami103574_RS13260	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Ami103574_RS13270	COG0519	Catalyzes the synthesis of GMP from XMP
Ami103574_RS13290	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Ami103574_RS13300	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
Ami103574_RS13305	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
Ami103574_RS13315	COG1131	(ABC) transporter
Ami103574_RS13330	COG1012	belongs to the aldehyde dehydrogenase family
Ami103574_RS13330	COG1454	alcohol dehydrogenase
Ami103574_RS13365	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
Ami103574_RS13370	COG1882	Formate acetyltransferase
Ami103574_RS13375	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Ami103574_RS13385	COG2972	Histidine kinase
Ami103574_RS13395	COG2313	pseudouridylate synthase activity
Ami103574_RS13400	COG0622	Phosphoesterase
Ami103574_RS13405	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Ami103574_RS13410	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Ami103574_RS13415	COG0049	tRNA binding
Ami103574_RS13420	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Ami103574_RS13425	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Ami103574_RS13430	COG0085	RNA polymerase activity
Ami103574_RS13435	COG0222	ribosome binding
Ami103574_RS13445	COG0081	regulation of translation
Ami103574_RS13450	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Ami103574_RS13455	COG0250	Participates in transcription elongation, termination and antitermination
Ami103574_RS13460	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Ami103574_RS13465	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Ami103574_RS13495	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Ami103574_RS13510	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Ami103574_RS13525	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
Ami103574_RS13530	COG0215	cysteine-tRNA ligase activity
Ami103574_RS13540	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Ami103574_RS13545	COG1051	belongs to the nudix hydrolase family
Ami103574_RS13550	COG0442	prolyl-tRNA aminoacylation
Ami103574_RS13555	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Ami103574_RS13555	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Ami103574_RS13560	COG4956	integral membrane protein (PIN domain superfamily)
Ami103574_RS13570	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Ami103574_RS13575	COG5002	protein histidine kinase activity
Ami103574_RS13580	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS13585	COG0531	amino acid
Ami103574_RS13590	COG1716	ATPase activity
Ami103574_RS13590	COG5001	Diguanylate cyclase
Ami103574_RS13600	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Ami103574_RS13605	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Ami103574_RS13610	COG0252	asparaginase activity
Ami103574_RS13615	COG0017	Asparaginyl-tRNA synthetase
Ami103574_RS13645	COG2204	response regulator
Ami103574_RS13670	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Ami103574_RS13675	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Ami103574_RS13680	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Ami103574_RS13685	COG1592	Rubrerythrin
Ami103574_RS13695	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Ami103574_RS13700	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Ami103574_RS13710	COG4770	biotin carboxylase activity
Ami103574_RS13720	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Ami103574_RS13730	COG2508	Transcriptional regulator
Ami103574_RS13730	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
Ami103574_RS13735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Ami103574_RS13740	COG0037	tRNA processing
Ami103574_RS13745	COG0488	(ABC) transporter
Ami103574_RS13795	COG2244	polysaccharide biosynthetic process
Ami103574_RS13830	COG2208	phosphoserine phosphatase activity
Ami103574_RS13840	COG0084	hydrolase, TatD family'
Ami103574_RS13855	COG0840	transmembrane signaling receptor activity
Ami103574_RS13870	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ami103574_RS13870	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ami103574_RS13880	COG1268	BioY protein
Ami103574_RS13885	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Ami103574_RS13885	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Ami103574_RS13900	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Ami103574_RS13910	COG2378	regulation of single-species biofilm formation
Ami103574_RS13920	COG2119	membrane
Ami103574_RS13935	COG1120	ATPase activity
Ami103574_RS13950	COG0583	DNA-binding transcription factor activity
Ami103574_RS13965	COG3279	Response regulator of the LytR AlgR family
Ami103574_RS13985	COG0583	DNA-binding transcription factor activity
Ami103574_RS14020	COG0559	Belongs to the binding-protein-dependent transport system permease family
Ami103574_RS14035	COG0410	ABC transporter
Ami103574_RS14065	COG0326	Molecular chaperone. Has ATPase activity
Ami103574_RS14070	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ami103574_RS14075	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Ami103574_RS14105	COG1476	TRANSCRIPTIONal
Ami103574_RS14110	COG1464	Belongs to the NlpA lipoprotein family
Ami103574_RS14115	COG2011	ABC-type metal ion transport system permease component
Ami103574_RS14120	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Ami103574_RS14125	COG0840	transmembrane signaling receptor activity
Ami103574_RS14130	COG0840	transmembrane signaling receptor activity
Ami103574_RS14135	COG0534	Mate efflux family protein
Ami103574_RS14140	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Ami103574_RS14150	COG1937	Protein conserved in bacteria
Ami103574_RS14155	COG1733	regulation of RNA biosynthetic process
Ami103574_RS14165	COG0628	permease
Ami103574_RS14180	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Ami103574_RS14190	COG0010	Belongs to the arginase family
Ami103574_RS14200	COG3829	transcription factor binding
Ami103574_RS14210	COG1695	Transcriptional regulator
Ami103574_RS14240	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Ami103574_RS14250	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Ami103574_RS14270	COG0517	IMP dehydrogenase activity
Ami103574_RS14270	COG0516	GMP reductase activity
Ami103574_RS14275	COG1876	peptidase activity
Ami103574_RS14295	COG0459	protein refolding
Ami103574_RS14300	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Ami103574_RS14305	COG1811	Na channel or pump
Ami103574_RS14325	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
Ami103574_RS14330	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Ami103574_RS14335	COG0488	(ABC) transporter
Ami103574_RS14350	COG0456	acetyltransferase
Ami103574_RS14355	COG1214	PFAM Peptidase M22, glycoprotease
Ami103574_RS14360	COG0802	atpase or kinase
Ami103574_RS14370	COG1129	ABC transporter
Ami103574_RS14390	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
Ami103574_RS14395	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Ami103574_RS14405	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
Ami103574_RS14415	COG1592	Rubrerythrin
Ami103574_RS14415	COG1773	rubredoxin
Ami103574_RS14435	COG3457	Alanine racemase
Ami103574_RS14440	COG0318	PFAM AMP-dependent synthetase and ligase
Ami103574_RS14445	COG0318	PFAM AMP-dependent synthetase and ligase
Ami103574_RS14455	COG2234	aminopeptidase activity
Ami103574_RS14480	COG1733	regulation of RNA biosynthetic process
Ami103574_RS14490	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Ami103574_RS14495	COG0488	(ABC) transporter
Ami103574_RS14500	COG4820	ethanolamine utilization protein (EutJ)
Ami103574_RS14520	COG3192	ethanolamine utilization protein
Ami103574_RS14565	COG4303	Ethanolamine ammonia lyase large subunit
Ami103574_RS14625	COG1132	(ABC) transporter
Ami103574_RS14640	COG1278	Cold shock
Ami103574_RS14660	COG2205	protein histidine kinase activity
Ami103574_RS14665	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS14670	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS14675	COG5002	protein histidine kinase activity
Ami103574_RS14690	COG0175	sulfate reduction
Ami103574_RS14705	COG1609	Transcriptional regulator
Ami103574_RS14710	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Ami103574_RS14715	COG4208	sulfate ABC transporter
Ami103574_RS14720	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Ami103574_RS14725	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Ami103574_RS14730	COG1132	(ABC) transporter
Ami103574_RS14735	COG1120	ATPase activity
Ami103574_RS14740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Ami103574_RS14745	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Ami103574_RS14750	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Ami103574_RS14760	COG2207	Transcriptional regulator
Ami103574_RS14760	COG1609	Transcriptional regulator
Ami103574_RS14765	COG2132	Multicopper oxidase
Ami103574_RS14835	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
Ami103574_RS14845	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Ami103574_RS14850	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Ami103574_RS14855	COG1028	Short-chain dehydrogenase reductase Sdr
Ami103574_RS14860	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Ami103574_RS14870	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Ami103574_RS14875	COG0438	transferase activity, transferring glycosyl groups
Ami103574_RS14880	COG0546	phosphoglycolate phosphatase activity
Ami103574_RS14890	COG2183	response to ionizing radiation
Ami103574_RS14900	COG0653	protein targeting
Ami103574_RS14905	COG1253	flavin adenine dinucleotide binding
Ami103574_RS14910	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
Ami103574_RS14915	COG0527	aspartate kinase activity
Ami103574_RS14920	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Ami103574_RS14935	COG0860	N-Acetylmuramoyl-L-alanine amidase
Ami103574_RS14940	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Ami103574_RS14950	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Ami103574_RS14955	COG5012	cobalamin binding
Ami103574_RS14960	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Ami103574_RS14965	COG1193	negative regulation of DNA recombination
Ami103574_RS14975	COG1509	lysine 2,3-aminomutase activity
Ami103574_RS14980	COG0604	alcohol dehydrogenase
Ami103574_RS14985	COG0604	alcohol dehydrogenase
Ami103574_RS14995	COG1607	acyl-coa hydrolase
Ami103574_RS15000	COG0165	Argininosuccinate lyase
Ami103574_RS15010	COG2195	Cleaves the N-terminal amino acid of tripeptides
Ami103574_RS15030	COG1132	(ABC) transporter
Ami103574_RS15040	COG0445	tRNA wobble uridine modification
Ami103574_RS15040	COG0445	tRNA wobble uridine modification
Ami103574_RS15055	COG2204	response regulator
Ami103574_RS15090	COG0833	amino acid
Ami103574_RS15095	COG4187	Peptidase family M20/M25/M40
Ami103574_RS15105	COG3829	transcription factor binding
Ami103574_RS15110	COG0789	Transcriptional regulator
Ami103574_RS15110	COG4978	Transcriptional regulator
Ami103574_RS15115	COG3437	response regulator, receiver
Ami103574_RS15135	COG1187	pseudouridine synthase activity
Ami103574_RS15140	COG1360	Flagellar Motor Protein
Ami103574_RS15145	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Ami103574_RS15150	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ami103574_RS15160	COG5002	protein histidine kinase activity
Ami103574_RS15160	COG3850	Histidine kinase
Ami103574_RS15190	COG3209	COG3209 Rhs family protein
Ami103574_RS15210	COG0840	transmembrane signaling receptor activity
Ami103574_RS15220	COG0151	Belongs to the GarS family
Ami103574_RS15225	COG0138	bifunctional purine biosynthesis protein purh
Ami103574_RS15230	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Ami103574_RS15235	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Ami103574_RS15240	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Ami103574_RS15245	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Ami103574_RS15250	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
Ami103574_RS15255	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Ami103574_RS15265	COG1346	cytolysis
Ami103574_RS15285	COG1686	Belongs to the peptidase S11 family
Ami103574_RS15305	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Ami103574_RS15320	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Ami103574_RS15325	COG1760	l-serine dehydratase
Ami103574_RS15330	COG1760	l-serine dehydratase
Ami103574_RS15335	COG0741	lytic transglycosylase activity
Ami103574_RS15340	COG0372	Belongs to the citrate synthase family
Ami103574_RS15345	COG3706	GGDEF domain
Ami103574_RS15350	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Ami103574_RS15355	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Ami103574_RS15360	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Ami103574_RS15365	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Ami103574_RS15370	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Ami103574_RS15375	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Ami103574_RS15380	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Ami103574_RS15385	COG0356	it plays a direct role in the translocation of protons across the membrane
Ami103574_RS15395	COG0534	Mate efflux family protein
Ami103574_RS15400	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Ami103574_RS15405	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Ami103574_RS15420	COG1534	Rna-binding protein
Ami103574_RS15425	COG0784	Response regulator, receiver
Ami103574_RS15425	COG5002	protein histidine kinase activity
Ami103574_RS15435	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Ami103574_RS15445	COG1126	abc transporter atp-binding protein
Ami103574_RS15450	COG0765	amino acid transport
Ami103574_RS15455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Ami103574_RS15465	COG0183	Belongs to the thiolase family
Ami103574_RS15475	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Ami103574_RS15480	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Ami103574_RS15485	COG5002	protein histidine kinase activity
Ami103574_RS15490	COG0745	RESPONSE REGULATOR receiver
Ami103574_RS15500	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Ami103574_RS15505	COG0581	inorganic phosphate transmembrane transporter activity
Ami103574_RS15510	COG0573	inorganic phosphate transmembrane transporter activity
Ami103574_RS15520	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Ami103574_RS15530	COG1122	ATPase activity
Ami103574_RS15535	COG0310	cobalt ion transport
Ami103574_RS15545	COG0469	pyruvate kinase activity
Ami103574_RS15565	COG0019	diaminopimelate decarboxylase activity
Ami103574_RS15575	COG2204	response regulator
Ami103574_RS15620	COG2801	Transposase and inactivated derivatives