locus-tag class description Ami3637_RS00010 PF00005 ABC transporter Ami3637_RS00010 PF00664 ABC transporter transmembrane region Ami3637_RS00025 PF02735 Ku70/Ku80 beta-barrel domain Ami3637_RS00035 PF01588 Putative tRNA binding domain Ami3637_RS00035 PF09334 tRNA synthetases class I (M) Ami3637_RS00035 PF08264 Anticodon-binding domain of tRNA Ami3637_RS00065 PF00158 Sigma-54 interaction domain Ami3637_RS00065 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS00065 PF00989 PAS fold Ami3637_RS00080 PF13382 Adenine deaminase C-terminal domain Ami3637_RS00080 PF01979 Amidohydrolase family Ami3637_RS00085 PF01979 Amidohydrolase family Ami3637_RS00085 PF13382 Adenine deaminase C-terminal domain Ami3637_RS00090 PF02082 Transcriptional regulator Ami3637_RS00110 PF00270 DEAD/DEAH box helicase Ami3637_RS00110 PF00271 Helicase conserved C-terminal domain Ami3637_RS00110 PF03880 DbpA RNA binding domain Ami3637_RS00115 PF01638 HxlR-like helix-turn-helix Ami3637_RS00145 PF07581 The GLUG motif Ami3637_RS00145 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Ami3637_RS00155 PF03576 Peptidase family S58 Ami3637_RS00160 PF13520 Amino acid permease Ami3637_RS00170 PF00158 Sigma-54 interaction domain Ami3637_RS00170 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS00170 PF13426 PAS domain Ami3637_RS00175 PF00155 Aminotransferase class I and II Ami3637_RS00180 PF01177 Asp/Glu/Hydantoin racemase Ami3637_RS00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS00185 PF03466 LysR substrate binding domain Ami3637_RS00200 PF00324 Amino acid permease Ami3637_RS00205 PF00171 Aldehyde dehydrogenase family Ami3637_RS00210 PF13411 MerR HTH family regulatory protein Ami3637_RS00225 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS00225 PF08361 MAATS-type transcriptional repressor, C-terminal region Ami3637_RS00230 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ami3637_RS00230 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS00255 PF04397 LytTr DNA-binding domain Ami3637_RS00255 PF00072 Response regulator receiver domain Ami3637_RS00260 PF01965 DJ-1/PfpI family Ami3637_RS00275 PF10437 Bacterial lipoate protein ligase C-terminus Ami3637_RS00275 PF03099 Biotin/lipoate A/B protein ligase family Ami3637_RS00280 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS00280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ami3637_RS00290 PF01047 MarR family Ami3637_RS00340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS00340 PF03466 LysR substrate binding domain Ami3637_RS00385 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS00385 PF05569 BlaR1 peptidase M56 Ami3637_RS00390 PF03965 Penicillinase repressor Ami3637_RS00400 PF05958 tRNA (Uracil-5-)-methyltransferase Ami3637_RS00405 PF01702 Queuine tRNA-ribosyltransferase Ami3637_RS00410 PF02547 Queuosine biosynthesis protein Ami3637_RS00415 PF08486 Stage II sporulation protein Ami3637_RS00425 PF07499 RuvA, C-terminal domain Ami3637_RS00425 PF01330 RuvA N terminal domain Ami3637_RS00430 PF02075 Crossover junction endodeoxyribonuclease RuvC Ami3637_RS00435 PF02863 Arginine repressor, C-terminal domain Ami3637_RS00435 PF01316 Arginine repressor, DNA binding domain Ami3637_RS00440 PF13476 AAA domain Ami3637_RS00455 PF01202 Shikimate kinase Ami3637_RS00460 PF02401 LytB protein Ami3637_RS00460 PF00575 S1 RNA binding domain Ami3637_RS00465 PF16193 AAA C-terminal domain Ami3637_RS00465 PF12002 MgsA AAA+ ATPase C terminal Ami3637_RS00465 PF05496 Holliday junction DNA helicase RuvB P-loop domain Ami3637_RS00515 PF00437 Type II/IV secretion system protein Ami3637_RS00520 PF02254 TrkA-N domain Ami3637_RS00520 PF00999 Sodium/hydrogen exchanger family Ami3637_RS00525 PF16736 Single Cache-like Ami3637_RS00525 PF00989 PAS fold Ami3637_RS00525 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS00530 PF00072 Response regulator receiver domain Ami3637_RS00530 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS00535 PF02690 Na+/Pi-cotransporter Ami3637_RS00545 PF00574 Clp protease Ami3637_RS00555 PF00391 PEP-utilising enzyme, mobile domain Ami3637_RS00555 PF02896 PEP-utilising enzyme, TIM barrel domain Ami3637_RS00555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ami3637_RS00565 PF00889 Elongation factor TS Ami3637_RS00575 PF07650 KH domain Ami3637_RS00575 PF01926 50S ribosome-binding GTPase Ami3637_RS00580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ami3637_RS00585 PF02130 Uncharacterized protein family UPF0054 Ami3637_RS00590 PF02562 PhoH-like protein Ami3637_RS00595 PF06898 Putative stage IV sporulation protein YqfD Ami3637_RS00605 PF00291 Pyridoxal-phosphate dependent enzyme Ami3637_RS00610 PF02082 Transcriptional regulator Ami3637_RS00620 PF01165 Ribosomal protein S21 Ami3637_RS00625 PF01230 HIT domain Ami3637_RS00630 PF00919 Uncharacterized protein family UPF0004 Ami3637_RS00630 PF01938 TRAM domain Ami3637_RS00630 PF04055 Radical SAM superfamily Ami3637_RS00635 PF08000 Bacterial PH domain Ami3637_RS00640 PF01522 Polysaccharide deacetylase Ami3637_RS00640 PF14883 Hypothetical glycosyl hydrolase family 13 Ami3637_RS00645 PF01520 N-acetylmuramoyl-L-alanine amidase Ami3637_RS00645 PF05036 Sporulation related domain Ami3637_RS00650 PF01880 Desulfoferrodoxin Ami3637_RS00650 PF06397 Desulfoferrodoxin, N-terminal domain Ami3637_RS00655 PF04452 RNA methyltransferase Ami3637_RS00665 PF06445 GyrI-like small molecule binding domain Ami3637_RS00665 PF13411 MerR HTH family regulatory protein Ami3637_RS00675 PF06962 Putative rRNA methylase Ami3637_RS00680 PF01451 Low molecular weight phosphotyrosine protein phosphatase Ami3637_RS00700 PF02834 LigT like Phosphoesterase Ami3637_RS00705 PF00586 AIR synthase related protein, N-terminal domain Ami3637_RS00705 PF02769 AIR synthase related protein, C-terminal domain Ami3637_RS00715 PF01455 HupF/HypC family Ami3637_RS00720 PF07503 HypF finger Ami3637_RS00720 PF01300 Telomere recombination Ami3637_RS00720 PF00708 Acylphosphatase Ami3637_RS00720 PF17788 HypF Kae1-like domain Ami3637_RS00725 PF00708 Acylphosphatase Ami3637_RS00730 PF02492 CobW/HypB/UreG, nucleotide-binding domain Ami3637_RS00745 PF00374 Nickel-dependent hydrogenase Ami3637_RS00745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Ami3637_RS00755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Ami3637_RS00760 PF00146 NADH dehydrogenase Ami3637_RS00765 PF13244 Domain of unknown function (DUF4040) Ami3637_RS00765 PF00361 Proton-conducting membrane transporter Ami3637_RS00765 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Ami3637_RS00770 PF00005 ABC transporter Ami3637_RS00770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami3637_RS00775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Ami3637_RS00775 PF00005 ABC transporter Ami3637_RS00780 PF12911 N-terminal TM domain of oligopeptide transport permease C Ami3637_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS00790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Ami3637_RS00810 PF02583 Metal-sensitive transcriptional repressor Ami3637_RS00820 PF09308 LuxQ, periplasmic Ami3637_RS00820 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS00820 PF00072 Response regulator receiver domain Ami3637_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS00830 PF00145 C-5 cytosine-specific DNA methylase Ami3637_RS00845 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Ami3637_RS00850 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Ami3637_RS00855 PF13581 Histidine kinase-like ATPase domain Ami3637_RS00855 PF13426 PAS domain Ami3637_RS00855 PF07568 Histidine kinase Ami3637_RS00860 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS00860 PF00072 Response regulator receiver domain Ami3637_RS00870 PF00072 Response regulator receiver domain Ami3637_RS00870 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS00880 PF00936 BMC domain Ami3637_RS00885 PF06130 Phosphate propanoyltransferase Ami3637_RS00890 PF00171 Aldehyde dehydrogenase family Ami3637_RS00890 PF00465 Iron-containing alcohol dehydrogenase Ami3637_RS00895 PF00936 BMC domain Ami3637_RS00910 PF10531 SLBB domain Ami3637_RS00910 PF13375 RnfC Barrel sandwich hybrid domain Ami3637_RS00910 PF13237 4Fe-4S dicluster domain Ami3637_RS00910 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami3637_RS00925 PF03319 Ethanolamine utilisation protein EutN/carboxysome Ami3637_RS00930 PF01923 Cobalamin adenosyltransferase Ami3637_RS00935 PF00936 BMC domain Ami3637_RS00945 PF10662 Ethanolamine utilisation - propanediol utilisation Ami3637_RS00950 PF00936 BMC domain Ami3637_RS00955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami3637_RS00955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami3637_RS00965 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Ami3637_RS00965 PF02152 Dihydroneopterin aldolase Ami3637_RS00970 PF00809 Pterin binding enzyme Ami3637_RS00975 PF01966 HD domain Ami3637_RS00980 PF01227 GTP cyclohydrolase I Ami3637_RS00990 PF00012 Hsp70 protein Ami3637_RS01000 PF01628 HrcA protein C terminal domain Ami3637_RS01005 PF00005 ABC transporter Ami3637_RS01010 PF00005 ABC transporter Ami3637_RS01010 PF12399 Branched-chain amino acid ATP-binding cassette transporter Ami3637_RS01015 PF11862 Domain of unknown function (DUF3382) Ami3637_RS01015 PF02653 Branched-chain amino acid transport system / permease component Ami3637_RS01020 PF02653 Branched-chain amino acid transport system / permease component Ami3637_RS01040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ami3637_RS01040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ami3637_RS01045 PF01235 Sodium:alanine symporter family Ami3637_RS01080 PF06969 HemN C-terminal domain Ami3637_RS01080 PF04055 Radical SAM superfamily Ami3637_RS01100 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS01100 PF06421 GTP-binding protein LepA C-terminus Ami3637_RS01100 PF00679 Elongation factor G C-terminus Ami3637_RS01100 PF03144 Elongation factor Tu domain 2 Ami3637_RS01115 PF03418 Germination protease Ami3637_RS01120 PF01649 Ribosomal protein S20 Ami3637_RS01125 PF12833 Helix-turn-helix domain Ami3637_RS01125 PF02311 AraC-like ligand binding domain Ami3637_RS01130 PF00696 Amino acid kinase family Ami3637_RS01135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ami3637_RS01135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ami3637_RS01145 PF05651 Putative sugar diacid recognition Ami3637_RS01145 PF17853 GGDEF-like domain Ami3637_RS01145 PF13556 PucR C-terminal helix-turn-helix domain Ami3637_RS01150 PF13520 Amino acid permease Ami3637_RS01155 PF03447 Homoserine dehydrogenase, NAD binding domain Ami3637_RS01155 PF00742 Homoserine dehydrogenase Ami3637_RS01155 PF01842 ACT domain Ami3637_RS01165 PF00892 EamA-like transporter family Ami3637_RS01170 PF03553 Na+/H+ antiporter family Ami3637_RS01185 PF08439 Oligopeptidase F Ami3637_RS01185 PF01432 Peptidase family M3 Ami3637_RS01190 PF01513 ATP-NAD kinase Ami3637_RS01195 PF00849 RNA pseudouridylate synthase Ami3637_RS01195 PF01479 S4 domain Ami3637_RS01200 PF00672 HAMP domain Ami3637_RS01200 PF02743 Cache domain Ami3637_RS01200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS01215 PF01743 Poly A polymerase head domain Ami3637_RS01215 PF12627 Probable RNA and SrmB- binding site of polymerase A Ami3637_RS01215 PF13735 tRNA nucleotidyltransferase domain 2 putative Ami3637_RS01225 PF16124 RecQ zinc-binding Ami3637_RS01225 PF00271 Helicase conserved C-terminal domain Ami3637_RS01225 PF00570 HRDC domain Ami3637_RS01225 PF00270 DEAD/DEAH box helicase Ami3637_RS01225 PF09382 RQC domain Ami3637_RS01245 PF00704 Glycosyl hydrolases family 18 Ami3637_RS01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS01265 PF03466 LysR substrate binding domain Ami3637_RS01280 PF03551 Transcriptional regulator PadR-like family Ami3637_RS01290 PF04892 VanZ like family Ami3637_RS01305 PF03853 YjeF-related protein N-terminus Ami3637_RS01325 PF00881 Nitroreductase family Ami3637_RS01330 PF01638 HxlR-like helix-turn-helix Ami3637_RS01335 PF00395 S-layer homology domain Ami3637_RS01355 PF02698 DUF218 domain Ami3637_RS01365 PF12627 Probable RNA and SrmB- binding site of polymerase A Ami3637_RS01365 PF01743 Poly A polymerase head domain Ami3637_RS01365 PF01966 HD domain Ami3637_RS01375 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami3637_RS01375 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami3637_RS01380 PF01555 DNA methylase Ami3637_RS01385 PF01555 DNA methylase Ami3637_RS01385 PF18273 Type III R-M EcoP15I C-terminal domain Ami3637_RS01390 PF04055 Radical SAM superfamily Ami3637_RS01390 PF11842 Domain of unknown function (DUF3362) Ami3637_RS01390 PF08497 Radical SAM N-terminal Ami3637_RS01415 PF00188 Cysteine-rich secretory protein family Ami3637_RS01420 PF00293 NUDIX domain Ami3637_RS01425 PF00892 EamA-like transporter family Ami3637_RS01435 PF04055 Radical SAM superfamily Ami3637_RS01440 PF00133 tRNA synthetases class I (I, L, M and V) Ami3637_RS01440 PF08264 Anticodon-binding domain of tRNA Ami3637_RS01450 PF02631 RecX family Ami3637_RS01465 PF01371 Trp repressor protein Ami3637_RS01470 PF01636 Phosphotransferase enzyme family Ami3637_RS01490 PF00171 Aldehyde dehydrogenase family Ami3637_RS01495 PF01923 Cobalamin adenosyltransferase Ami3637_RS01500 PF03319 Ethanolamine utilisation protein EutN/carboxysome Ami3637_RS01510 PF06130 Phosphate propanoyltransferase Ami3637_RS01515 PF00936 BMC domain Ami3637_RS01520 PF00936 BMC domain Ami3637_RS01525 PF02288 Dehydratase medium subunit Ami3637_RS01530 PF18427 DD-reactivating factor swiveling domain Ami3637_RS01530 PF08841 Diol dehydratase reactivase ATPase-like domain Ami3637_RS01535 PF02287 Dehydratase small subunit Ami3637_RS01540 PF02288 Dehydratase medium subunit Ami3637_RS01545 PF02286 Dehydratase large subunit Ami3637_RS01550 PF00936 BMC domain Ami3637_RS01555 PF12833 Helix-turn-helix domain Ami3637_RS01565 PF03572 Peptidase family S41 Ami3637_RS01565 PF00595 PDZ domain Ami3637_RS01570 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Ami3637_RS01570 PF17768 RecJ OB domain Ami3637_RS01570 PF02272 DHHA1 domain Ami3637_RS01570 PF01368 DHH family Ami3637_RS01575 PF01476 LysM domain Ami3637_RS01575 PF01551 Peptidase family M23 Ami3637_RS01575 PF08525 Opacity-associated protein A N-terminal motif Ami3637_RS01580 PF02687 FtsX-like permease family Ami3637_RS01580 PF18075 FtsX extracellular domain Ami3637_RS01585 PF00005 ABC transporter Ami3637_RS01605 PF02780 Transketolase, C-terminal domain Ami3637_RS01605 PF02779 Transketolase, pyrimidine binding domain Ami3637_RS01610 PF00456 Transketolase, thiamine diphosphate binding domain Ami3637_RS01615 PF03808 Glycosyl transferase WecB/TagA/CpsF family Ami3637_RS01635 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Ami3637_RS01640 PF03853 YjeF-related protein N-terminus Ami3637_RS01640 PF01256 Carbohydrate kinase Ami3637_RS01645 PF01769 Divalent cation transporter Ami3637_RS01645 PF03448 MgtE intracellular N domain Ami3637_RS01645 PF00571 CBS domain Ami3637_RS01660 PF01467 Cytidylyltransferase-like Ami3637_RS01665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Ami3637_RS01665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Ami3637_RS01670 PF02436 Conserved carboxylase domain Ami3637_RS01670 PF00682 HMGL-like Ami3637_RS01670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ami3637_RS01670 PF02785 Biotin carboxylase C-terminal domain Ami3637_RS01670 PF00364 Biotin-requiring enzyme Ami3637_RS01670 PF00289 Biotin carboxylase, N-terminal domain Ami3637_RS01675 PF05552 Conserved TM helix Ami3637_RS01675 PF00924 Mechanosensitive ion channel Ami3637_RS01685 PF03747 ADP-ribosylglycohydrolase Ami3637_RS01690 PF00294 pfkB family carbohydrate kinase Ami3637_RS01695 PF00294 pfkB family carbohydrate kinase Ami3637_RS01700 PF00005 ABC transporter Ami3637_RS01700 PF08402 TOBE domain Ami3637_RS01705 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS01710 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS01715 PF13188 PAS domain Ami3637_RS01715 PF08448 PAS fold Ami3637_RS01715 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS01715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS01715 PF00072 Response regulator receiver domain Ami3637_RS01720 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS01720 PF00072 Response regulator receiver domain Ami3637_RS01720 PF00158 Sigma-54 interaction domain Ami3637_RS01725 PF13520 Amino acid permease Ami3637_RS01730 PF13416 Bacterial extracellular solute-binding protein Ami3637_RS01735 PF01255 Putative undecaprenyl diphosphate synthase Ami3637_RS01775 PF13439 Glycosyltransferase Family 4 Ami3637_RS01775 PF00534 Glycosyl transferases group 1 Ami3637_RS01780 PF13439 Glycosyltransferase Family 4 Ami3637_RS01780 PF00534 Glycosyl transferases group 1 Ami3637_RS01820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Ami3637_RS01820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Ami3637_RS01820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Ami3637_RS01825 PF03808 Glycosyl transferase WecB/TagA/CpsF family Ami3637_RS01830 PF02397 Bacterial sugar transferase Ami3637_RS01855 PF00395 S-layer homology domain Ami3637_RS01855 PF00963 Cohesin domain Ami3637_RS01870 PF10997 Alternate to MurJ Ami3637_RS01900 PF04055 Radical SAM superfamily Ami3637_RS01900 PF06969 HemN C-terminal domain Ami3637_RS01910 PF05167 Uncharacterised ACR (DUF711) Ami3637_RS01930 PF05853 beta-keto acid cleavage enzyme Ami3637_RS01935 PF03668 P-loop ATPase protein family Ami3637_RS01945 PF01565 FAD binding domain Ami3637_RS01945 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Ami3637_RS01960 PF02308 MgtC family Ami3637_RS01975 PF00072 Response regulator receiver domain Ami3637_RS01980 PF00072 Response regulator receiver domain Ami3637_RS01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS01985 PF00672 HAMP domain Ami3637_RS01985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Ami3637_RS01985 PF00072 Response regulator receiver domain Ami3637_RS01985 PF01627 Hpt domain Ami3637_RS01985 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS01990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Ami3637_RS01990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Ami3637_RS02065 PF00437 Type II/IV secretion system protein Ami3637_RS02070 PF13614 AAA domain Ami3637_RS02145 PF00258 Flavodoxin Ami3637_RS02145 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS02150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Ami3637_RS02150 PF02770 Acyl-CoA dehydrogenase, middle domain Ami3637_RS02150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Ami3637_RS02195 PF04239 Protein of unknown function (DUF421) Ami3637_RS02205 PF12822 ECF transporter, substrate-specific component Ami3637_RS02210 PF01479 S4 domain Ami3637_RS02215 PF00216 Bacterial DNA-binding protein Ami3637_RS02220 PF03819 MazG nucleotide pyrophosphohydrolase domain Ami3637_RS02225 PF01943 Polysaccharide biosynthesis protein Ami3637_RS02225 PF14667 Polysaccharide biosynthesis C-terminal domain Ami3637_RS02230 PF01979 Amidohydrolase family Ami3637_RS02235 PF15714 Stage V sporulation protein T C-terminal, transcription factor Ami3637_RS02235 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ami3637_RS02240 PF17757 UvrB interaction domain Ami3637_RS02240 PF00271 Helicase conserved C-terminal domain Ami3637_RS02240 PF02559 CarD-like/TRCF domain Ami3637_RS02240 PF00270 DEAD/DEAH box helicase Ami3637_RS02240 PF03461 TRCF domain Ami3637_RS02245 PF01195 Peptidyl-tRNA hydrolase Ami3637_RS02250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Ami3637_RS02250 PF14572 Phosphoribosyl synthetase-associated domain Ami3637_RS02255 PF00132 Bacterial transferase hexapeptide (six repeats) Ami3637_RS02255 PF12804 MobA-like NTP transferase domain Ami3637_RS02260 PF02875 Mur ligase family, glutamate ligase domain Ami3637_RS02260 PF01225 Mur ligase family, catalytic domain Ami3637_RS02260 PF08245 Mur ligase middle domain Ami3637_RS02265 PF09182 Bacterial purine repressor, N-terminal Ami3637_RS02265 PF00156 Phosphoribosyl transferase domain Ami3637_RS02270 PF04026 SpoVG Ami3637_RS02275 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS02280 PF00085 Thioredoxin Ami3637_RS02290 PF01464 Transglycosylase SLT domain Ami3637_RS02300 PF01098 Cell cycle protein Ami3637_RS02305 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS02315 PF00144 Beta-lactamase Ami3637_RS02320 PF00156 Phosphoribosyl transferase domain Ami3637_RS02330 PF08281 Sigma-70, region 4 Ami3637_RS02330 PF04542 Sigma-70 region 2 Ami3637_RS02340 PF10417 C-terminal domain of 1-Cys peroxiredoxin Ami3637_RS02340 PF00578 AhpC/TSA family Ami3637_RS02360 PF01180 Dihydroorotate dehydrogenase Ami3637_RS02365 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ami3637_RS02370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Ami3637_RS02375 PF01979 Amidohydrolase family Ami3637_RS02380 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Ami3637_RS02380 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Ami3637_RS02395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ami3637_RS02395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ami3637_RS02400 PF00128 Alpha amylase, catalytic domain Ami3637_RS02400 PF00395 S-layer homology domain Ami3637_RS02400 PF02903 Alpha amylase, N-terminal ig-like domain Ami3637_RS02430 PF06452 Carbohydrate family 9 binding domain-like Ami3637_RS02430 PF00395 S-layer homology domain Ami3637_RS02430 PF02018 Carbohydrate binding domain Ami3637_RS02430 PF00331 Glycosyl hydrolase family 10 Ami3637_RS02465 PF01546 Peptidase family M20/M25/M40 Ami3637_RS02485 PF13361 UvrD-like helicase C-terminal domain Ami3637_RS02485 PF00580 UvrD/REP helicase N-terminal domain Ami3637_RS02485 PF12705 PD-(D/E)XK nuclease superfamily Ami3637_RS02490 PF13361 UvrD-like helicase C-terminal domain Ami3637_RS02490 PF00580 UvrD/REP helicase N-terminal domain Ami3637_RS02490 PF12705 PD-(D/E)XK nuclease superfamily Ami3637_RS02500 PF00395 S-layer homology domain Ami3637_RS02550 PF07687 Peptidase dimerisation domain Ami3637_RS02550 PF01546 Peptidase family M20/M25/M40 Ami3637_RS02580 PF10518 TAT (twin-arginine translocation) pathway signal sequence Ami3637_RS02580 PF00149 Calcineurin-like phosphoesterase Ami3637_RS02600 PF11799 impB/mucB/samB family C-terminal domain Ami3637_RS02600 PF00817 impB/mucB/samB family Ami3637_RS02605 PF00271 Helicase conserved C-terminal domain Ami3637_RS02605 PF00270 DEAD/DEAH box helicase Ami3637_RS02610 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS02610 PF03707 Bacterial signalling protein N terminal repeat Ami3637_RS02610 PF00563 EAL domain Ami3637_RS02620 PF12557 Cob(I)alamin adenosyltransferase N terminal Ami3637_RS02620 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Ami3637_RS02625 PF01475 Ferric uptake regulator family Ami3637_RS02630 PF00950 ABC 3 transport family Ami3637_RS02640 PF01297 Zinc-uptake complex component A periplasmic Ami3637_RS02670 PF02163 Peptidase family M50 Ami3637_RS02675 PF01476 LysM domain Ami3637_RS02675 PF00877 NlpC/P60 family Ami3637_RS02680 PF13091 PLD-like domain Ami3637_RS02680 PF13396 Phospholipase_D-nuclease N-terminal Ami3637_RS02710 PF01584 CheW-like domain Ami3637_RS02725 PF00491 Arginase family Ami3637_RS02730 PF01022 Bacterial regulatory protein, arsR family Ami3637_RS02735 PF03773 Predicted permease Ami3637_RS02755 PF00491 Arginase family Ami3637_RS02760 PF00999 Sodium/hydrogen exchanger family Ami3637_RS02770 PF01979 Amidohydrolase family Ami3637_RS02775 PF08443 RimK-like ATP-grasp domain Ami3637_RS02775 PF18030 RimK PreATP-grasp domain Ami3637_RS02810 PF00871 Acetokinase family Ami3637_RS02815 PF01515 Phosphate acetyl/butaryl transferase Ami3637_RS02830 PF01938 TRAM domain Ami3637_RS02830 PF00919 Uncharacterized protein family UPF0004 Ami3637_RS02830 PF04055 Radical SAM superfamily Ami3637_RS02865 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) Ami3637_RS02870 PF04865 Baseplate J-like protein Ami3637_RS02995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Ami3637_RS02995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Ami3637_RS03000 PF02660 Glycerol-3-phosphate acyltransferase Ami3637_RS03005 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Ami3637_RS03005 PF01926 50S ribosome-binding GTPase Ami3637_RS03010 PF02881 SRP54-type protein, helical bundle domain Ami3637_RS03010 PF00448 SRP54-type protein, GTPase domain Ami3637_RS03015 PF02463 RecF/RecN/SMC N terminal domain Ami3637_RS03015 PF06470 SMC proteins Flexible Hinge Domain Ami3637_RS03020 PF00035 Double-stranded RNA binding motif Ami3637_RS03020 PF14622 Ribonuclease-III-like Ami3637_RS03055 PF07969 Amidohydrolase family Ami3637_RS03060 PF07687 Peptidase dimerisation domain Ami3637_RS03060 PF01546 Peptidase family M20/M25/M40 Ami3637_RS03065 PF00324 Amino acid permease Ami3637_RS03075 PF00155 Aminotransferase class I and II Ami3637_RS03080 PF01678 Diaminopimelate epimerase Ami3637_RS03085 PF07943 Penicillin-binding protein 5, C-terminal domain Ami3637_RS03085 PF00768 D-alanyl-D-alanine carboxypeptidase Ami3637_RS03090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ami3637_RS03090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ami3637_RS03100 PF00842 Alanine racemase, C-terminal domain Ami3637_RS03100 PF01168 Alanine racemase, N-terminal domain Ami3637_RS03105 PF07687 Peptidase dimerisation domain Ami3637_RS03105 PF01546 Peptidase family M20/M25/M40 Ami3637_RS03125 PF07670 Nucleoside recognition Ami3637_RS03130 PF07670 Nucleoside recognition Ami3637_RS03135 PF17676 LD-carboxypeptidase C-terminal domain Ami3637_RS03135 PF02016 LD-carboxypeptidase N-terminal domain Ami3637_RS03140 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS03140 PF00158 Sigma-54 interaction domain Ami3637_RS03140 PF01590 GAF domain Ami3637_RS03150 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami3637_RS03165 PF01522 Polysaccharide deacetylase Ami3637_RS03165 PF13739 Deacetylase PdaC Ami3637_RS03165 PF11738 Protein of unknown function (DUF3298) Ami3637_RS03180 PF00781 Diacylglycerol kinase catalytic domain Ami3637_RS03190 PF02875 Mur ligase family, glutamate ligase domain Ami3637_RS03190 PF08245 Mur ligase middle domain Ami3637_RS03195 PF00133 tRNA synthetases class I (I, L, M and V) Ami3637_RS03195 PF10458 Valyl tRNA synthetase tRNA binding arm Ami3637_RS03195 PF08264 Anticodon-binding domain of tRNA Ami3637_RS03205 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS03210 PF02602 Uroporphyrinogen-III synthase HemD Ami3637_RS03210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami3637_RS03215 PF03900 Porphobilinogen deaminase, C-terminal domain Ami3637_RS03215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Ami3637_RS03220 PF10414 Sirohaem synthase dimerisation region Ami3637_RS03220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami3637_RS03225 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Ami3637_RS03225 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Ami3637_RS03225 PF01488 Shikimate / quinate 5-dehydrogenase Ami3637_RS03230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami3637_RS03235 PF06180 Cobalt chelatase (CbiK) Ami3637_RS03245 PF00202 Aminotransferase class-III Ami3637_RS03250 PF00490 Delta-aminolevulinic acid dehydratase Ami3637_RS03255 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Ami3637_RS03255 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Ami3637_RS03260 PF04961 Formiminotransferase-cyclodeaminase Ami3637_RS03265 PF01268 Formate--tetrahydrofolate ligase Ami3637_RS03270 PF01351 Ribonuclease HII Ami3637_RS03275 PF01926 50S ribosome-binding GTPase Ami3637_RS03280 PF01245 Ribosomal protein L19 Ami3637_RS03285 PF02899 Phage integrase, N-terminal SAM-like domain Ami3637_RS03285 PF00589 Phage integrase family Ami3637_RS03295 PF00293 NUDIX domain Ami3637_RS03300 PF03807 NADP oxidoreductase coenzyme F420-dependent Ami3637_RS03300 PF14748 Pyrroline-5-carboxylate reductase dimerisation Ami3637_RS03305 PF00696 Amino acid kinase family Ami3637_RS03310 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS03310 PF17932 Tetracyclin repressor-like, C-terminal domain Ami3637_RS03320 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ami3637_RS03330 PF02492 CobW/HypB/UreG, nucleotide-binding domain Ami3637_RS03335 PF12848 ABC transporter Ami3637_RS03335 PF00005 ABC transporter Ami3637_RS03345 PF04232 Stage V sporulation protein S (SpoVS) Ami3637_RS03360 PF00171 Aldehyde dehydrogenase family Ami3637_RS03400 PF00936 BMC domain Ami3637_RS03405 PF06130 Phosphate propanoyltransferase Ami3637_RS03410 PF00171 Aldehyde dehydrogenase family Ami3637_RS03410 PF00465 Iron-containing alcohol dehydrogenase Ami3637_RS03415 PF00936 BMC domain Ami3637_RS03430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami3637_RS03430 PF13375 RnfC Barrel sandwich hybrid domain Ami3637_RS03430 PF10531 SLBB domain Ami3637_RS03430 PF13237 4Fe-4S dicluster domain Ami3637_RS03450 PF10662 Ethanolamine utilisation - propanediol utilisation Ami3637_RS03455 PF00936 BMC domain Ami3637_RS03460 PF13187 4Fe-4S dicluster domain Ami3637_RS03460 PF04055 Radical SAM superfamily Ami3637_RS03465 PF02901 Pyruvate formate lyase-like Ami3637_RS03465 PF01228 Glycine radical Ami3637_RS03470 PF00465 Iron-containing alcohol dehydrogenase Ami3637_RS03470 PF00171 Aldehyde dehydrogenase family Ami3637_RS03475 PF00936 BMC domain Ami3637_RS03480 PF00936 BMC domain Ami3637_RS03495 PF00150 Cellulase (glycosyl hydrolase family 5) Ami3637_RS03495 PF03424 Carbohydrate binding domain (family 17/28) Ami3637_RS03495 PF00395 S-layer homology domain Ami3637_RS03500 PF13411 MerR HTH family regulatory protein Ami3637_RS03500 PF06445 GyrI-like small molecule binding domain Ami3637_RS03515 PF06445 GyrI-like small molecule binding domain Ami3637_RS03515 PF12833 Helix-turn-helix domain Ami3637_RS03520 PF00109 Beta-ketoacyl synthase, N-terminal domain Ami3637_RS03520 PF02801 Beta-ketoacyl synthase, C-terminal domain Ami3637_RS03525 PF08331 Domain of unknown function (DUF1730) Ami3637_RS03540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ami3637_RS03555 PF03466 LysR substrate binding domain Ami3637_RS03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS03560 PF00005 ABC transporter Ami3637_RS03560 PF00664 ABC transporter transmembrane region Ami3637_RS03565 PF00005 ABC transporter Ami3637_RS03565 PF00664 ABC transporter transmembrane region Ami3637_RS03580 PF00155 Aminotransferase class I and II Ami3637_RS03590 PF00704 Glycosyl hydrolases family 18 Ami3637_RS03630 PF01026 TatD related DNase Ami3637_RS03635 PF00005 ABC transporter Ami3637_RS03645 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS03650 PF02515 CoA-transferase family III Ami3637_RS03655 PF00484 Carbonic anhydrase Ami3637_RS03660 PF13416 Bacterial extracellular solute-binding protein Ami3637_RS03665 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS03675 PF00005 ABC transporter Ami3637_RS03675 PF08402 TOBE domain Ami3637_RS03710 PF08281 Sigma-70, region 4 Ami3637_RS03710 PF04542 Sigma-70 region 2 Ami3637_RS03720 PF00892 EamA-like transporter family Ami3637_RS03740 PF03063 Prismane/CO dehydrogenase family Ami3637_RS03785 PF02548 Ketopantoate hydroxymethyltransferase Ami3637_RS03795 PF01544 CorA-like Mg2+ transporter protein Ami3637_RS03810 PF00072 Response regulator receiver domain Ami3637_RS03810 PF04397 LytTr DNA-binding domain Ami3637_RS03815 PF06580 Histidine kinase Ami3637_RS03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS03825 PF01966 HD domain Ami3637_RS03830 PF00150 Cellulase (glycosyl hydrolase family 5) Ami3637_RS03830 PF03424 Carbohydrate binding domain (family 17/28) Ami3637_RS03830 PF00395 S-layer homology domain Ami3637_RS03835 PF00395 S-layer homology domain Ami3637_RS03835 PF00150 Cellulase (glycosyl hydrolase family 5) Ami3637_RS03835 PF03424 Carbohydrate binding domain (family 17/28) Ami3637_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS03860 PF00005 ABC transporter Ami3637_RS03870 PF00465 Iron-containing alcohol dehydrogenase Ami3637_RS03890 PF01381 Helix-turn-helix Ami3637_RS03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS03905 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS03905 PF00672 HAMP domain Ami3637_RS03910 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS03910 PF00072 Response regulator receiver domain Ami3637_RS03930 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS03930 PF08448 PAS fold Ami3637_RS03935 PF00011 Hsp20/alpha crystallin family Ami3637_RS03940 PF01738 Dienelactone hydrolase family Ami3637_RS03950 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS03960 PF08281 Sigma-70, region 4 Ami3637_RS03960 PF04542 Sigma-70 region 2 Ami3637_RS03965 PF13490 Putative zinc-finger Ami3637_RS03970 PF00672 HAMP domain Ami3637_RS03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS03970 PF18698 Histidine kinase sensor domain Ami3637_RS03970 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS03975 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS03975 PF00072 Response regulator receiver domain Ami3637_RS03990 PF00403 Heavy-metal-associated domain Ami3637_RS03995 PF00403 Heavy-metal-associated domain Ami3637_RS04015 PF01066 CDP-alcohol phosphatidyltransferase Ami3637_RS04020 PF00324 Amino acid permease Ami3637_RS04030 PF00324 Amino acid permease Ami3637_RS04040 PF00005 ABC transporter Ami3637_RS04045 PF13411 MerR HTH family regulatory protein Ami3637_RS04050 PF00704 Glycosyl hydrolases family 18 Ami3637_RS04050 PF00041 Fibronectin type III domain Ami3637_RS04055 PF00704 Glycosyl hydrolases family 18 Ami3637_RS04055 PF00041 Fibronectin type III domain Ami3637_RS04065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS04065 PF00672 HAMP domain Ami3637_RS04065 PF02743 Cache domain Ami3637_RS04080 PF04542 Sigma-70 region 2 Ami3637_RS04080 PF08281 Sigma-70, region 4 Ami3637_RS04100 PF00334 Nucleoside diphosphate kinase Ami3637_RS04105 PF00731 AIR carboxylase Ami3637_RS04115 PF01699 Sodium/calcium exchanger protein Ami3637_RS04125 PF13411 MerR HTH family regulatory protein Ami3637_RS04145 PF13520 Amino acid permease Ami3637_RS04150 PF00324 Amino acid permease Ami3637_RS04155 PF14492 Elongation Factor G, domain II Ami3637_RS04155 PF03764 Elongation factor G, domain IV Ami3637_RS04155 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS04155 PF00679 Elongation factor G C-terminus Ami3637_RS04165 PF00005 ABC transporter Ami3637_RS04165 PF00664 ABC transporter transmembrane region Ami3637_RS04170 PF13677 Membrane MotB of proton-channel complex MotA/MotB Ami3637_RS04170 PF00691 OmpA family Ami3637_RS04175 PF01618 MotA/TolQ/ExbB proton channel family Ami3637_RS04180 PF00291 Pyridoxal-phosphate dependent enzyme Ami3637_RS04195 PF13411 MerR HTH family regulatory protein Ami3637_RS04195 PF07739 TipAS antibiotic-recognition domain Ami3637_RS04205 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS04205 PF07702 UTRA domain Ami3637_RS04215 PF01638 HxlR-like helix-turn-helix Ami3637_RS04245 PF07690 Major Facilitator Superfamily Ami3637_RS04250 PF01047 MarR family Ami3637_RS04300 PF02743 Cache domain Ami3637_RS04300 PF00672 HAMP domain Ami3637_RS04300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS04305 PF01966 HD domain Ami3637_RS04310 PF12848 ABC transporter Ami3637_RS04310 PF16326 ABC transporter C-terminal domain Ami3637_RS04310 PF00005 ABC transporter Ami3637_RS04320 PF03358 NADPH-dependent FMN reductase Ami3637_RS04335 PF00005 ABC transporter Ami3637_RS04345 PF08281 Sigma-70, region 4 Ami3637_RS04345 PF04542 Sigma-70 region 2 Ami3637_RS04360 PF00797 N-acetyltransferase Ami3637_RS04365 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS04370 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS04370 PF00072 Response regulator receiver domain Ami3637_RS04375 PF00535 Glycosyl transferase family 2 Ami3637_RS04380 PF00072 Response regulator receiver domain Ami3637_RS04380 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS04385 PF00672 HAMP domain Ami3637_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS04385 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS04390 PF12704 MacB-like periplasmic core domain Ami3637_RS04390 PF02687 FtsX-like permease family Ami3637_RS04390 PF00005 ABC transporter Ami3637_RS04400 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS04400 PF00155 Aminotransferase class I and II Ami3637_RS04435 PF00395 S-layer homology domain Ami3637_RS04435 PF02903 Alpha amylase, N-terminal ig-like domain Ami3637_RS04435 PF00128 Alpha amylase, catalytic domain Ami3637_RS04450 PF01938 TRAM domain Ami3637_RS04450 PF05958 tRNA (Uracil-5-)-methyltransferase Ami3637_RS04455 PF03061 Thioesterase superfamily Ami3637_RS04465 PF13472 GDSL-like Lipase/Acylhydrolase family Ami3637_RS04475 PF13443 Cro/C1-type HTH DNA-binding domain Ami3637_RS04520 PF00465 Iron-containing alcohol dehydrogenase Ami3637_RS04525 PF03372 Endonuclease/Exonuclease/phosphatase family Ami3637_RS04555 PF13185 GAF domain Ami3637_RS04555 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS04570 PF03466 LysR substrate binding domain Ami3637_RS04575 PF00892 EamA-like transporter family Ami3637_RS04595 PF08331 Domain of unknown function (DUF1730) Ami3637_RS04625 PF05067 Manganese containing catalase Ami3637_RS04630 PF12652 CotJB protein Ami3637_RS04715 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami3637_RS04725 PF06874 Firmicute fructose-1,6-bisphosphatase Ami3637_RS04730 PF01131 DNA topoisomerase Ami3637_RS04730 PF01751 Toprim domain Ami3637_RS04735 PF02436 Conserved carboxylase domain Ami3637_RS04735 PF00682 HMGL-like Ami3637_RS04735 PF00364 Biotin-requiring enzyme Ami3637_RS04740 PF01476 LysM domain Ami3637_RS04740 PF00704 Glycosyl hydrolases family 18 Ami3637_RS04745 PF00963 Cohesin domain Ami3637_RS04745 PF00395 S-layer homology domain Ami3637_RS04755 PF01790 Prolipoprotein diacylglyceryl transferase Ami3637_RS04760 PF09997 Predicted membrane protein (DUF2238) Ami3637_RS04785 PF01546 Peptidase family M20/M25/M40 Ami3637_RS04805 PF13556 PucR C-terminal helix-turn-helix domain Ami3637_RS04805 PF07905 Purine catabolism regulatory protein-like family Ami3637_RS04805 PF17853 GGDEF-like domain Ami3637_RS04810 PF01545 Cation efflux family Ami3637_RS04810 PF16916 Dimerisation domain of Zinc Transporter Ami3637_RS04815 PF00963 Cohesin domain Ami3637_RS04815 PF00395 S-layer homology domain Ami3637_RS04820 PF02225 PA domain Ami3637_RS04820 PF04389 Peptidase family M28 Ami3637_RS04830 PF17770 Ribonuclease J C-terminal domain Ami3637_RS04830 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS04830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Ami3637_RS04835 PF14883 Hypothetical glycosyl hydrolase family 13 Ami3637_RS04835 PF01522 Polysaccharide deacetylase Ami3637_RS04840 PF00072 Response regulator receiver domain Ami3637_RS04840 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS04845 PF18698 Histidine kinase sensor domain Ami3637_RS04845 PF00672 HAMP domain Ami3637_RS04845 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS04845 PF00989 PAS fold Ami3637_RS04855 PF00005 ABC transporter Ami3637_RS04865 PF01969 Protein of unknown function DUF111 Ami3637_RS04880 PF05198 Translation initiation factor IF-3, N-terminal domain Ami3637_RS04880 PF00707 Translation initiation factor IF-3, C-terminal domain Ami3637_RS04890 PF13520 Amino acid permease Ami3637_RS04905 PF03591 AzlC protein Ami3637_RS04915 PF00563 EAL domain Ami3637_RS04915 PF01590 GAF domain Ami3637_RS04915 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS04915 PF00360 Phytochrome region Ami3637_RS04920 PF01144 Coenzyme A transferase Ami3637_RS04925 PF01144 Coenzyme A transferase Ami3637_RS04935 PF10609 NUBPL iron-transfer P-loop NTPase Ami3637_RS04940 PF00072 Response regulator receiver domain Ami3637_RS04940 PF01966 HD domain Ami3637_RS04950 PF00258 Flavodoxin Ami3637_RS04965 PF07664 Ferrous iron transport protein B C terminus Ami3637_RS04965 PF17910 FeoB cytosolic helical domain Ami3637_RS04965 PF02421 Ferrous iron transport protein B Ami3637_RS04965 PF07670 Nucleoside recognition Ami3637_RS04980 PF08668 HDOD domain Ami3637_RS04980 PF00563 EAL domain Ami3637_RS04995 PF08486 Stage II sporulation protein Ami3637_RS05000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ami3637_RS05005 PF00437 Type II/IV secretion system protein Ami3637_RS05045 PF04203 Sortase domain Ami3637_RS05060 PF06130 Phosphate propanoyltransferase Ami3637_RS05075 PF01926 50S ribosome-binding GTPase Ami3637_RS05080 PF02190 ATP-dependent protease La (LON) substrate-binding domain Ami3637_RS05080 PF05362 Lon protease (S16) C-terminal proteolytic domain Ami3637_RS05080 PF00004 ATPase family associated with various cellular activities (AAA) Ami3637_RS05085 PF06689 ClpX C4-type zinc finger Ami3637_RS05085 PF10431 C-terminal, D2-small domain, of ClpB protein Ami3637_RS05085 PF07724 AAA domain (Cdc48 subfamily) Ami3637_RS05095 PF05697 Bacterial trigger factor protein (TF) Ami3637_RS05095 PF05698 Bacterial trigger factor protein (TF) C-terminus Ami3637_RS05095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Ami3637_RS05100 PF01928 CYTH domain Ami3637_RS05130 PF04397 LytTr DNA-binding domain Ami3637_RS05130 PF00072 Response regulator receiver domain Ami3637_RS05140 PF13860 FlgD Ig-like domain Ami3637_RS05140 PF05922 Peptidase inhibitor I9 Ami3637_RS05140 PF02225 PA domain Ami3637_RS05140 PF00082 Subtilase family Ami3637_RS05165 PF01113 Dihydrodipicolinate reductase, N-terminus Ami3637_RS05165 PF05173 Dihydrodipicolinate reductase, C-terminus Ami3637_RS05175 PF00226 DnaJ domain Ami3637_RS05175 PF00684 DnaJ central domain Ami3637_RS05175 PF01556 DnaJ C terminal domain Ami3637_RS05185 PF07687 Peptidase dimerisation domain Ami3637_RS05185 PF01546 Peptidase family M20/M25/M40 Ami3637_RS05190 PF08279 HTH domain Ami3637_RS05190 PF02829 3H domain Ami3637_RS05195 PF10996 Beta-Casp domain Ami3637_RS05195 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Ami3637_RS05195 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS05200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ami3637_RS05205 PF00175 Oxidoreductase NAD-binding domain Ami3637_RS05205 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ami3637_RS05215 PF00037 4Fe-4S binding domain Ami3637_RS05215 PF04060 Putative Fe-S cluster Ami3637_RS05215 PF13187 4Fe-4S dicluster domain Ami3637_RS05225 PF02378 Phosphotransferase system, EIIC Ami3637_RS05235 PF03606 C4-dicarboxylate anaerobic carrier Ami3637_RS05240 PF07969 Amidohydrolase family Ami3637_RS05260 PF01553 Acyltransferase Ami3637_RS05275 PF02390 Putative methyltransferase Ami3637_RS05285 PF02361 Cobalt transport protein Ami3637_RS05300 PF01196 Ribosomal protein L17 Ami3637_RS05310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Ami3637_RS05310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Ami3637_RS05310 PF01000 RNA polymerase Rpb3/RpoA insert domain Ami3637_RS05315 PF00163 Ribosomal protein S4/S9 N-terminal domain Ami3637_RS05315 PF01479 S4 domain Ami3637_RS05320 PF00411 Ribosomal protein S11 Ami3637_RS05325 PF00416 Ribosomal protein S13/S18 Ami3637_RS05330 PF00444 Ribosomal protein L36 Ami3637_RS05335 PF01176 Translation initiation factor 1A / IF-1 Ami3637_RS05340 PF00557 Metallopeptidase family M24 Ami3637_RS05345 PF05191 Adenylate kinase, active site lid Ami3637_RS05350 PF00344 SecY translocase Ami3637_RS05355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ami3637_RS05360 PF00327 Ribosomal protein L30p/L7e Ami3637_RS05365 PF03719 Ribosomal protein S5, C-terminal domain Ami3637_RS05365 PF00333 Ribosomal protein S5, N-terminal domain Ami3637_RS05370 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ami3637_RS05375 PF00347 Ribosomal protein L6 Ami3637_RS05380 PF00410 Ribosomal protein S8 Ami3637_RS05385 PF00253 Ribosomal protein S14p/S29e Ami3637_RS05390 PF00281 Ribosomal protein L5 Ami3637_RS05390 PF00673 ribosomal L5P family C-terminus Ami3637_RS05395 PF00467 KOW motif Ami3637_RS05395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Ami3637_RS05400 PF00238 Ribosomal protein L14p/L23e Ami3637_RS05405 PF00366 Ribosomal protein S17 Ami3637_RS05410 PF00831 Ribosomal L29 protein Ami3637_RS05415 PF00252 Ribosomal protein L16p/L10e Ami3637_RS05420 PF07650 KH domain Ami3637_RS05420 PF00189 Ribosomal protein S3, C-terminal domain Ami3637_RS05425 PF00237 Ribosomal protein L22p/L17e Ami3637_RS05430 PF00203 Ribosomal protein S19 Ami3637_RS05435 PF00181 Ribosomal Proteins L2, RNA binding domain Ami3637_RS05435 PF03947 Ribosomal Proteins L2, C-terminal domain Ami3637_RS05440 PF00276 Ribosomal protein L23 Ami3637_RS05445 PF00573 Ribosomal protein L4/L1 family Ami3637_RS05450 PF00297 Ribosomal protein L3 Ami3637_RS05455 PF00338 Ribosomal protein S10p/S20e Ami3637_RS05460 PF00294 pfkB family carbohydrate kinase Ami3637_RS05470 PF04070 Domain of unknown function (DUF378) Ami3637_RS05480 PF02811 PHP domain Ami3637_RS05485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ami3637_RS05485 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ami3637_RS05485 PF14579 Helix-hairpin-helix motif Ami3637_RS05485 PF02811 PHP domain Ami3637_RS05490 PF01965 DJ-1/PfpI family Ami3637_RS05515 PF02608 ABC transporter substrate-binding protein PnrA-like Ami3637_RS05520 PF00156 Phosphoribosyl transferase domain Ami3637_RS05540 PF07195 Flagellar hook-associated protein 2 C-terminus Ami3637_RS05540 PF02465 Flagellar hook-associated protein 2 N-terminus Ami3637_RS05550 PF13614 AAA domain Ami3637_RS05560 PF00072 Response regulator receiver domain Ami3637_RS05565 PF03975 CheD chemotactic sensory transduction Ami3637_RS05570 PF04509 CheC-like family Ami3637_RS05580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami3637_RS05580 PF00460 Flagella basal body rod protein Ami3637_RS05585 PF00460 Flagella basal body rod protein Ami3637_RS05585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami3637_RS05600 PF00460 Flagella basal body rod protein Ami3637_RS05605 PF00963 Cohesin domain Ami3637_RS05605 PF00395 S-layer homology domain Ami3637_RS05610 PF01627 Hpt domain Ami3637_RS05610 PF09078 CheY binding Ami3637_RS05610 PF01584 CheW-like domain Ami3637_RS05610 PF02895 Signal transducing histidine kinase, homodimeric domain Ami3637_RS05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS05615 PF01739 CheR methyltransferase, SAM binding domain Ami3637_RS05615 PF03705 CheR methyltransferase, all-alpha domain Ami3637_RS05620 PF00072 Response regulator receiver domain Ami3637_RS05620 PF01339 CheB methylesterase Ami3637_RS05625 PF02491 SHS2 domain inserted in FTSA Ami3637_RS05640 PF00460 Flagella basal body rod protein Ami3637_RS05640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami3637_RS05655 PF02623 FliW protein Ami3637_RS05660 PF02599 Global regulator protein family Ami3637_RS05665 PF00700 Bacterial flagellin C-terminal helical region Ami3637_RS05665 PF00669 Bacterial flagellin N-terminal helical region Ami3637_RS05675 PF00202 Aminotransferase class-III Ami3637_RS05695 PF00535 Glycosyl transferase family 2 Ami3637_RS05700 PF04055 Radical SAM superfamily Ami3637_RS05700 PF06463 Molybdenum Cofactor Synthesis C Ami3637_RS05705 PF04055 Radical SAM superfamily Ami3637_RS05705 PF06463 Molybdenum Cofactor Synthesis C Ami3637_RS05710 PF06463 Molybdenum Cofactor Synthesis C Ami3637_RS05710 PF04055 Radical SAM superfamily Ami3637_RS05715 PF04055 Radical SAM superfamily Ami3637_RS05715 PF06463 Molybdenum Cofactor Synthesis C Ami3637_RS05730 PF01370 NAD dependent epimerase/dehydratase family Ami3637_RS05735 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Ami3637_RS05740 PF00132 Bacterial transferase hexapeptide (six repeats) Ami3637_RS05745 PF16363 GDP-mannose 4,6 dehydratase Ami3637_RS05750 PF00483 Nucleotidyl transferase Ami3637_RS05770 PF01312 FlhB HrpN YscU SpaS Family Ami3637_RS05780 PF01313 Bacterial export proteins, family 3 Ami3637_RS05785 PF00813 FliP family Ami3637_RS05785 PF04347 Flagellar biosynthesis protein, FliO Ami3637_RS05795 PF00072 Response regulator receiver domain Ami3637_RS05800 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Ami3637_RS05800 PF04509 CheC-like family Ami3637_RS05810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Ami3637_RS05810 PF02154 Flagellar motor switch protein FliM Ami3637_RS05820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami3637_RS05820 PF00460 Flagella basal body rod protein Ami3637_RS05830 PF13861 FlgD Tudor-like domain Ami3637_RS05830 PF13860 FlgD Ig-like domain Ami3637_RS05830 PF03963 Flagellar hook capping protein - N-terminal region Ami3637_RS05845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami3637_RS05845 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ami3637_RS05845 PF18269 T3SS EscN ATPase C-terminal domain Ami3637_RS05855 PF14841 FliG middle domain Ami3637_RS05855 PF01706 FliG C-terminal domain Ami3637_RS05855 PF14842 FliG N-terminal domain Ami3637_RS05860 PF08345 Flagellar M-ring protein C-terminal Ami3637_RS05860 PF01514 Secretory protein of YscJ/FliF family Ami3637_RS05865 PF02049 Flagellar hook-basal body complex protein FliE Ami3637_RS05870 PF00460 Flagella basal body rod protein Ami3637_RS05870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Ami3637_RS05885 PF06949 Protein of unknown function (DUF1292) Ami3637_RS05890 PF01541 GIY-YIG catalytic domain Ami3637_RS05890 PF12826 Helix-hairpin-helix motif Ami3637_RS05890 PF02151 UvrB/uvrC motif Ami3637_RS05890 PF08459 UvrC Helix-hairpin-helix N-terminal Ami3637_RS05895 PF07943 Penicillin-binding protein 5, C-terminal domain Ami3637_RS05895 PF00768 D-alanyl-D-alanine carboxypeptidase Ami3637_RS05900 PF01676 Metalloenzyme superfamily Ami3637_RS05900 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Ami3637_RS05905 PF00266 Aminotransferase class-V Ami3637_RS05910 PF01842 ACT domain Ami3637_RS05910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ami3637_RS05910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ami3637_RS05920 PF01725 Ham1 family Ami3637_RS05925 PF01138 3' exoribonuclease family, domain 1 Ami3637_RS05925 PF03725 3' exoribonuclease family, domain 2 Ami3637_RS05930 PF02659 Putative manganese efflux pump Ami3637_RS05940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ami3637_RS05940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ami3637_RS06005 PF02142 MGS-like domain Ami3637_RS06015 PF01522 Polysaccharide deacetylase Ami3637_RS06025 PF00749 tRNA synthetases class I (E and Q), catalytic domain Ami3637_RS06035 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS06035 PF17151 Periplasmic sensor domain Ami3637_RS06040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Ami3637_RS06040 PF05221 S-adenosyl-L-homocysteine hydrolase Ami3637_RS06060 PF01380 SIS domain Ami3637_RS06065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ami3637_RS06065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ami3637_RS06065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ami3637_RS06065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ami3637_RS06075 PF02457 DisA bacterial checkpoint controller nucleotide-binding Ami3637_RS06080 PF02867 Ribonucleotide reductase, barrel domain Ami3637_RS06080 PF00317 Ribonucleotide reductase, all-alpha domain Ami3637_RS06080 PF03477 ATP cone domain Ami3637_RS06085 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Ami3637_RS06085 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Ami3637_RS06090 PF00156 Phosphoribosyl transferase domain Ami3637_RS06095 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Ami3637_RS06095 PF14490 Helix-hairpin-helix containing domain Ami3637_RS06095 PF13538 UvrD-like helicase C-terminal domain Ami3637_RS06105 PF02540 NAD synthase Ami3637_RS06105 PF00795 Carbon-nitrogen hydrolase Ami3637_RS06110 PF03707 Bacterial signalling protein N terminal repeat Ami3637_RS06110 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS06110 PF00563 EAL domain Ami3637_RS06115 PF00672 HAMP domain Ami3637_RS06115 PF13426 PAS domain Ami3637_RS06115 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS06115 PF14827 Double sensory domain of two-component sensor kinase Ami3637_RS06130 PF02687 FtsX-like permease family Ami3637_RS06130 PF12704 MacB-like periplasmic core domain Ami3637_RS06140 PF00005 ABC transporter Ami3637_RS06155 PF02502 Ribose/Galactose Isomerase Ami3637_RS06160 PF03481 Putative GTP-binding controlling metal-binding Ami3637_RS06160 PF01300 Telomere recombination Ami3637_RS06170 PF01197 Ribosomal protein L31 Ami3637_RS06175 PF07690 Major Facilitator Superfamily Ami3637_RS06180 PF17827 PrmC N-terminal domain Ami3637_RS06180 PF05175 Methyltransferase small domain Ami3637_RS06185 PF07136 Protein of unknown function (DUF1385) Ami3637_RS06190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami3637_RS06190 PF07498 Rho termination factor, N-terminal domain Ami3637_RS06190 PF07497 Rho termination factor, RNA-binding domain Ami3637_RS06200 PF03816 Cell envelope-related transcriptional attenuator domain Ami3637_RS06205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ami3637_RS06205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Ami3637_RS06210 PF00342 Phosphoglucose isomerase Ami3637_RS06215 PF02719 Polysaccharide biosynthesis protein Ami3637_RS06225 PF02397 Bacterial sugar transferase Ami3637_RS06245 PF00665 Integrase core domain Ami3637_RS06245 PF13276 HTH-like domain Ami3637_RS06245 PF13333 Integrase core domain Ami3637_RS06250 PF16363 GDP-mannose 4,6 dehydratase Ami3637_RS06270 PF00483 Nucleotidyl transferase Ami3637_RS06280 PF00535 Glycosyl transferase family 2 Ami3637_RS06290 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Ami3637_RS06295 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ami3637_RS06320 PF05523 WxcM-like, C-terminal Ami3637_RS06325 PF00132 Bacterial transferase hexapeptide (six repeats) Ami3637_RS06325 PF12464 Maltose acetyltransferase Ami3637_RS06340 PF00535 Glycosyl transferase family 2 Ami3637_RS06355 PF01061 ABC-2 type transporter Ami3637_RS06360 PF16363 GDP-mannose 4,6 dehydratase Ami3637_RS06370 PF01370 NAD dependent epimerase/dehydratase family Ami3637_RS06375 PF00294 pfkB family carbohydrate kinase Ami3637_RS06375 PF01467 Cytidylyltransferase-like Ami3637_RS06380 PF13580 SIS domain Ami3637_RS06385 PF00534 Glycosyl transferases group 1 Ami3637_RS06385 PF13439 Glycosyltransferase Family 4 Ami3637_RS06405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Ami3637_RS06410 PF00550 Phosphopantetheine attachment site Ami3637_RS06425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ami3637_RS06425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ami3637_RS06445 PF02397 Bacterial sugar transferase Ami3637_RS06455 PF02350 UDP-N-acetylglucosamine 2-epimerase Ami3637_RS06460 PF01370 NAD dependent epimerase/dehydratase family Ami3637_RS06465 PF02719 Polysaccharide biosynthesis protein Ami3637_RS06465 PF08485 Polysaccharide biosynthesis protein C-terminal Ami3637_RS06485 PF00534 Glycosyl transferases group 1 Ami3637_RS06495 PF03023 Lipid II flippase MurJ Ami3637_RS06500 PF06452 Carbohydrate family 9 binding domain-like Ami3637_RS06500 PF00331 Glycosyl hydrolase family 10 Ami3637_RS06500 PF02018 Carbohydrate binding domain Ami3637_RS06500 PF00395 S-layer homology domain Ami3637_RS06525 PF00474 Sodium:solute symporter family Ami3637_RS06535 PF06452 Carbohydrate family 9 binding domain-like Ami3637_RS06535 PF02018 Carbohydrate binding domain Ami3637_RS06535 PF00331 Glycosyl hydrolase family 10 Ami3637_RS06535 PF00395 S-layer homology domain Ami3637_RS06540 PF00654 Voltage gated chloride channel Ami3637_RS06550 PF00005 ABC transporter Ami3637_RS06550 PF12558 ATP-binding cassette cobalt transporter Ami3637_RS06555 PF07155 ECF-type riboflavin transporter, S component Ami3637_RS06565 PF08903 Domain of unknown function (DUF1846) Ami3637_RS06570 PF00689 Cation transporting ATPase, C-terminus Ami3637_RS06570 PF00690 Cation transporter/ATPase, N-terminus Ami3637_RS06575 PF01471 Putative peptidoglycan binding domain Ami3637_RS06575 PF17820 PDZ domain Ami3637_RS06575 PF03572 Peptidase family S41 Ami3637_RS06585 PF01820 D-ala D-ala ligase N-terminus Ami3637_RS06585 PF07478 D-ala D-ala ligase C-terminus Ami3637_RS06590 PF01430 Hsp33 protein Ami3637_RS06595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ami3637_RS06595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ami3637_RS06595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ami3637_RS06595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ami3637_RS06600 PF13180 PDZ domain Ami3637_RS06605 PF09551 Stage II sporulation protein R (spore_II_R) Ami3637_RS06615 PF04509 CheC-like family Ami3637_RS06620 PF07729 FCD domain Ami3637_RS06620 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS06625 PF00288 GHMP kinases N terminal domain Ami3637_RS06625 PF08544 GHMP kinases C terminal Ami3637_RS06630 PF08544 GHMP kinases C terminal Ami3637_RS06630 PF00288 GHMP kinases N terminal domain Ami3637_RS06640 PF14437 MafB19-like deaminase Ami3637_RS06645 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS06645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ami3637_RS06670 PF02417 Chromate transporter Ami3637_RS06695 PF01381 Helix-turn-helix Ami3637_RS06705 PF00155 Aminotransferase class I and II Ami3637_RS06740 PF01037 Lrp/AsnC ligand binding domain Ami3637_RS06755 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS06755 PF05569 BlaR1 peptidase M56 Ami3637_RS06790 PF00005 ABC transporter Ami3637_RS06790 PF02687 FtsX-like permease family Ami3637_RS06790 PF12704 MacB-like periplasmic core domain Ami3637_RS06795 PF13533 Biotin-lipoyl like Ami3637_RS06815 PF10397 Adenylosuccinate lyase C-terminus Ami3637_RS06815 PF00206 Lyase Ami3637_RS06830 PF00899 ThiF family Ami3637_RS06835 PF00860 Permease family Ami3637_RS06840 PF05525 Branched-chain amino acid transport protein Ami3637_RS06845 PF01183 Glycosyl hydrolases family 25 Ami3637_RS06855 PF04055 Radical SAM superfamily Ami3637_RS06860 PF02901 Pyruvate formate lyase-like Ami3637_RS06860 PF01228 Glycine radical Ami3637_RS06870 PF07969 Amidohydrolase family Ami3637_RS06875 PF01168 Alanine racemase, N-terminal domain Ami3637_RS06875 PF00842 Alanine racemase, C-terminal domain Ami3637_RS06885 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS06885 PF07729 FCD domain Ami3637_RS06890 PF07837 Formiminotransferase domain, N-terminal subdomain Ami3637_RS06890 PF02971 Formiminotransferase domain Ami3637_RS06905 PF17392 Urocanase C-terminal domain Ami3637_RS06905 PF17391 Urocanase N-terminal domain Ami3637_RS06905 PF01175 Urocanase Rossmann-like domain Ami3637_RS06910 PF00221 Aromatic amino acid lyase Ami3637_RS06945 PF00171 Aldehyde dehydrogenase family Ami3637_RS06980 PF00291 Pyridoxal-phosphate dependent enzyme Ami3637_RS06980 PF13291 ACT domain Ami3637_RS07005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Ami3637_RS07005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Ami3637_RS07010 PF10369 Small subunit of acetolactate synthase Ami3637_RS07015 PF00205 Thiamine pyrophosphate enzyme, central domain Ami3637_RS07015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ami3637_RS07015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami3637_RS07020 PF00682 HMGL-like Ami3637_RS07020 PF08502 LeuA allosteric (dimerisation) domain Ami3637_RS07030 PF00694 Aconitase C-terminal domain Ami3637_RS07035 PF00330 Aconitase family (aconitate hydratase) Ami3637_RS07040 PF00694 Aconitase C-terminal domain Ami3637_RS07045 PF00330 Aconitase family (aconitate hydratase) Ami3637_RS07055 PF00563 EAL domain Ami3637_RS07055 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS07055 PF13426 PAS domain Ami3637_RS07060 PF00793 DAHP synthetase I family Ami3637_RS07060 PF18152 DAHP synthase ferredoxin-like domain Ami3637_RS07065 PF01842 ACT domain Ami3637_RS07065 PF02153 Prephenate dehydrogenase Ami3637_RS07070 PF01761 3-dehydroquinate synthase Ami3637_RS07075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ami3637_RS07080 PF01264 Chorismate synthase Ami3637_RS07090 PF08501 Shikimate dehydrogenase substrate binding domain Ami3637_RS07095 PF01487 Type I 3-dehydroquinase Ami3637_RS07105 PF05656 Protein of unknown function (DUF805) Ami3637_RS07115 PF01202 Shikimate kinase Ami3637_RS07120 PF01042 Endoribonuclease L-PSP Ami3637_RS07125 PF04073 Aminoacyl-tRNA editing domain Ami3637_RS07140 PF00583 Acetyltransferase (GNAT) family Ami3637_RS07145 PF13302 Acetyltransferase (GNAT) domain Ami3637_RS07160 PF00398 Ribosomal RNA adenine dimethylase Ami3637_RS07165 PF13331 Domain of unknown function (DUF4093) Ami3637_RS07165 PF01751 Toprim domain Ami3637_RS07200 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS07200 PF00672 HAMP domain Ami3637_RS07200 PF13426 PAS domain Ami3637_RS07210 PF00072 Response regulator receiver domain Ami3637_RS07210 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS07220 PF02203 Tar ligand binding domain homologue Ami3637_RS07220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS07220 PF00672 HAMP domain Ami3637_RS07225 PF00082 Subtilase family Ami3637_RS07230 PF00082 Subtilase family Ami3637_RS07245 PF01546 Peptidase family M20/M25/M40 Ami3637_RS07250 PF03553 Na+/H+ antiporter family Ami3637_RS07270 PF00485 Phosphoribulokinase / Uridine kinase family Ami3637_RS07275 PF08525 Opacity-associated protein A N-terminal motif Ami3637_RS07275 PF01476 LysM domain Ami3637_RS07275 PF01551 Peptidase family M23 Ami3637_RS07295 PF00772 DnaB-like helicase N terminal domain Ami3637_RS07295 PF03796 DnaB-like helicase C terminal domain Ami3637_RS07300 PF03948 Ribosomal protein L9, C-terminal domain Ami3637_RS07300 PF01281 Ribosomal protein L9, N-terminal domain Ami3637_RS07305 PF02272 DHHA1 domain Ami3637_RS07305 PF01368 DHH family Ami3637_RS07315 PF01084 Ribosomal protein S18 Ami3637_RS07320 PF00436 Single-strand binding protein family Ami3637_RS07325 PF01250 Ribosomal protein S6 Ami3637_RS07330 PF00294 pfkB family carbohydrate kinase Ami3637_RS07330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Ami3637_RS07350 PF02608 ABC transporter substrate-binding protein PnrA-like Ami3637_RS07360 PF01156 Inosine-uridine preferring nucleoside hydrolase Ami3637_RS07375 PF02540 NAD synthase Ami3637_RS07385 PF00293 NUDIX domain Ami3637_RS07390 PF01569 PAP2 superfamily Ami3637_RS07400 PF00464 Serine hydroxymethyltransferase Ami3637_RS07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS07410 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS07415 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS07415 PF00072 Response regulator receiver domain Ami3637_RS07430 PF00005 ABC transporter Ami3637_RS07435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami3637_RS07435 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami3637_RS07440 PF00579 tRNA synthetases class I (W and Y) Ami3637_RS07445 PF04539 Sigma-70 region 3 Ami3637_RS07445 PF04542 Sigma-70 region 2 Ami3637_RS07445 PF04545 Sigma-70, region 4 Ami3637_RS07450 PF13581 Histidine kinase-like ATPase domain Ami3637_RS07455 PF00521 DNA gyrase/topoisomerase IV, subunit A Ami3637_RS07455 PF03989 DNA gyrase C-terminal domain, beta-propeller Ami3637_RS07460 PF00204 DNA gyrase B Ami3637_RS07460 PF01751 Toprim domain Ami3637_RS07460 PF00986 DNA gyrase B subunit, carboxyl terminus Ami3637_RS07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS07470 PF02463 RecF/RecN/SMC N terminal domain Ami3637_RS07475 PF00712 DNA polymerase III beta subunit, N-terminal domain Ami3637_RS07475 PF02768 DNA polymerase III beta subunit, C-terminal domain Ami3637_RS07475 PF02767 DNA polymerase III beta subunit, central domain Ami3637_RS07480 PF11638 DnaA N-terminal domain Ami3637_RS07480 PF08299 Bacterial dnaA protein helix-turn-helix Ami3637_RS07480 PF00308 Bacterial dnaA protein Ami3637_RS07485 PF00468 Ribosomal protein L34 Ami3637_RS07500 PF02096 60Kd inner membrane protein Ami3637_RS07500 PF14849 YidC periplasmic domain Ami3637_RS07505 PF14804 Jag N-terminus Ami3637_RS07505 PF01424 R3H domain Ami3637_RS07510 PF12631 MnmE helical domain Ami3637_RS07510 PF10396 GTP-binding protein TrmE N-terminus Ami3637_RS07510 PF01926 50S ribosome-binding GTPase Ami3637_RS07515 PF13932 GidA associated domain Ami3637_RS07515 PF01134 Glucose inhibited division protein A Ami3637_RS07520 PF02527 rRNA small subunit methyltransferase G Ami3637_RS07525 PF17762 HTH domain found in ParB protein Ami3637_RS07525 PF02195 ParB-like nuclease domain Ami3637_RS07530 PF13614 AAA domain Ami3637_RS07535 PF02195 ParB-like nuclease domain Ami3637_RS07535 PF17762 HTH domain found in ParB protein Ami3637_RS07540 PF06961 Protein of unknown function (DUF1294) Ami3637_RS07545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Ami3637_RS07550 PF00005 ABC transporter Ami3637_RS07555 PF02687 FtsX-like permease family Ami3637_RS07555 PF12704 MacB-like periplasmic core domain Ami3637_RS07560 PF07702 UTRA domain Ami3637_RS07560 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS07565 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS07590 PF00893 Small Multidrug Resistance protein Ami3637_RS07595 PF00266 Aminotransferase class-V Ami3637_RS07600 PF00075 RNase H Ami3637_RS07625 PF02590 Predicted SPOUT methyltransferase Ami3637_RS07640 PF01022 Bacterial regulatory protein, arsR family Ami3637_RS07650 PF03707 Bacterial signalling protein N terminal repeat Ami3637_RS07650 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS07650 PF00563 EAL domain Ami3637_RS07655 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Ami3637_RS07655 PF01276 Orn/Lys/Arg decarboxylase, major domain Ami3637_RS07660 PF17284 Spermidine synthase tetramerisation domain Ami3637_RS07665 PF00491 Arginase family Ami3637_RS07675 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS07675 PF05569 BlaR1 peptidase M56 Ami3637_RS07680 PF03965 Penicillinase repressor Ami3637_RS07685 PF03553 Na+/H+ antiporter family Ami3637_RS07690 PF00158 Sigma-54 interaction domain Ami3637_RS07690 PF13426 PAS domain Ami3637_RS07690 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS07695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Ami3637_RS07695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Ami3637_RS07705 PF00158 Sigma-54 interaction domain Ami3637_RS07705 PF13426 PAS domain Ami3637_RS07705 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS07720 PF00291 Pyridoxal-phosphate dependent enzyme Ami3637_RS07725 PF16552 D-ornithine 4,5-aminomutase alpha-subunit Ami3637_RS07730 PF02310 B12 binding domain Ami3637_RS07730 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Ami3637_RS07730 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Ami3637_RS07740 PF01168 Alanine racemase, N-terminal domain Ami3637_RS07745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS07745 PF02203 Tar ligand binding domain homologue Ami3637_RS07745 PF00672 HAMP domain Ami3637_RS07750 PF01541 GIY-YIG catalytic domain Ami3637_RS07755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Ami3637_RS07755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami3637_RS07755 PF00205 Thiamine pyrophosphate enzyme, central domain Ami3637_RS07760 PF00072 Response regulator receiver domain Ami3637_RS07760 PF01584 CheW-like domain Ami3637_RS07765 PF01967 MoaC family Ami3637_RS07770 PF01261 Xylose isomerase-like TIM barrel Ami3637_RS07840 PF00301 Rubredoxin Ami3637_RS07845 PF16916 Dimerisation domain of Zinc Transporter Ami3637_RS07845 PF01545 Cation efflux family Ami3637_RS07865 PF03577 Peptidase family C69 Ami3637_RS07875 PF00266 Aminotransferase class-V Ami3637_RS07880 PF02669 K+-transporting ATPase, c chain Ami3637_RS07895 PF03814 Potassium-transporting ATPase A subunit Ami3637_RS07905 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS07905 PF00072 Response regulator receiver domain Ami3637_RS07910 PF13493 Domain of unknown function (DUF4118) Ami3637_RS07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS07910 PF02702 Osmosensitive K+ channel His kinase sensor domain Ami3637_RS07910 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS07915 PF00999 Sodium/hydrogen exchanger family Ami3637_RS07915 PF02254 TrkA-N domain Ami3637_RS07930 PF01037 Lrp/AsnC ligand binding domain Ami3637_RS07940 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS07940 PF00072 Response regulator receiver domain Ami3637_RS07945 PF07943 Penicillin-binding protein 5, C-terminal domain Ami3637_RS07945 PF00768 D-alanyl-D-alanine carboxypeptidase Ami3637_RS07950 PF01168 Alanine racemase, N-terminal domain Ami3637_RS07955 PF00005 ABC transporter Ami3637_RS07960 PF01053 Cys/Met metabolism PLP-dependent enzyme Ami3637_RS07965 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami3637_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS07980 PF13426 PAS domain Ami3637_RS07980 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS07980 PF00158 Sigma-54 interaction domain Ami3637_RS07985 PF13520 Amino acid permease Ami3637_RS07990 PF07969 Amidohydrolase family Ami3637_RS08005 PF00963 Cohesin domain Ami3637_RS08005 PF00395 S-layer homology domain Ami3637_RS08010 PF07687 Peptidase dimerisation domain Ami3637_RS08010 PF01546 Peptidase family M20/M25/M40 Ami3637_RS08030 PF03606 C4-dicarboxylate anaerobic carrier Ami3637_RS08090 PF03699 Uncharacterised protein family (UPF0182) Ami3637_RS08100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami3637_RS08100 PF02403 Seryl-tRNA synthetase N-terminal domain Ami3637_RS08120 PF13533 Biotin-lipoyl like Ami3637_RS08140 PF00873 AcrB/AcrD/AcrF family Ami3637_RS08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS08150 PF00672 HAMP domain Ami3637_RS08150 PF02203 Tar ligand binding domain homologue Ami3637_RS08155 PF04607 Region found in RelA / SpoT proteins Ami3637_RS08165 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS08170 PF13478 XdhC Rossmann domain Ami3637_RS08170 PF02625 XdhC and CoxI family Ami3637_RS08180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami3637_RS08180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami3637_RS08185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS08185 PF02743 Cache domain Ami3637_RS08185 PF00672 HAMP domain Ami3637_RS08190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS08190 PF00672 HAMP domain Ami3637_RS08190 PF02743 Cache domain Ami3637_RS08195 PF01022 Bacterial regulatory protein, arsR family Ami3637_RS08200 PF00403 Heavy-metal-associated domain Ami3637_RS08210 PF07969 Amidohydrolase family Ami3637_RS08215 PF01979 Amidohydrolase family Ami3637_RS08225 PF03466 LysR substrate binding domain Ami3637_RS08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS08230 PF10531 SLBB domain Ami3637_RS08230 PF13375 RnfC Barrel sandwich hybrid domain Ami3637_RS08230 PF13237 4Fe-4S dicluster domain Ami3637_RS08230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Ami3637_RS08240 PF04205 FMN-binding domain Ami3637_RS08245 PF02508 Rnf-Nqr subunit, membrane protein Ami3637_RS08250 PF02508 Rnf-Nqr subunit, membrane protein Ami3637_RS08255 PF00037 4Fe-4S binding domain Ami3637_RS08255 PF04060 Putative Fe-S cluster Ami3637_RS08255 PF13187 4Fe-4S dicluster domain Ami3637_RS08310 PF02424 ApbE family Ami3637_RS08330 PF00005 ABC transporter Ami3637_RS08350 PF09383 NIL domain Ami3637_RS08350 PF00005 ABC transporter Ami3637_RS08370 PF00158 Sigma-54 interaction domain Ami3637_RS08370 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS08370 PF13426 PAS domain Ami3637_RS08380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ami3637_RS08380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Ami3637_RS08385 PF01235 Sodium:alanine symporter family Ami3637_RS08400 PF01734 Patatin-like phospholipase Ami3637_RS08405 PF00224 Pyruvate kinase, barrel domain Ami3637_RS08405 PF02887 Pyruvate kinase, alpha/beta domain Ami3637_RS08405 PF00391 PEP-utilising enzyme, mobile domain Ami3637_RS08435 PF00005 ABC transporter Ami3637_RS08450 PF12146 Serine aminopeptidase, S33 Ami3637_RS08455 PF00005 ABC transporter Ami3637_RS08465 PF02146 Sir2 family Ami3637_RS08470 PF01734 Patatin-like phospholipase Ami3637_RS08475 PF12849 PBP superfamily domain Ami3637_RS08480 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS08485 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS08490 PF00005 ABC transporter Ami3637_RS08495 PF01895 PhoU domain Ami3637_RS08500 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS08500 PF00072 Response regulator receiver domain Ami3637_RS08520 PF01975 Survival protein SurE Ami3637_RS08530 PF00108 Thiolase, N-terminal domain Ami3637_RS08530 PF02803 Thiolase, C-terminal domain Ami3637_RS08540 PF00497 Bacterial extracellular solute-binding proteins, family 3 Ami3637_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS08550 PF00005 ABC transporter Ami3637_RS08575 PF02441 Flavoprotein Ami3637_RS08575 PF04127 DNA / pantothenate metabolism flavoprotein Ami3637_RS08580 PF00749 tRNA synthetases class I (E and Q), catalytic domain Ami3637_RS08580 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Ami3637_RS08585 PF00390 Malic enzyme, N-terminal domain Ami3637_RS08585 PF03949 Malic enzyme, NAD binding domain Ami3637_RS08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS08590 PF00672 HAMP domain Ami3637_RS08590 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS08590 PF01627 Hpt domain Ami3637_RS08590 PF00072 Response regulator receiver domain Ami3637_RS08590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Ami3637_RS08600 PF01985 CRS1 / YhbY (CRM) domain Ami3637_RS08605 PF01416 tRNA pseudouridine synthase Ami3637_RS08610 PF14437 MafB19-like deaminase Ami3637_RS08615 PF00953 Glycosyl transferase family 4 Ami3637_RS08620 PF02350 UDP-N-acetylglucosamine 2-epimerase Ami3637_RS08625 PF01554 MatE Ami3637_RS08635 PF00119 ATP synthase A chain Ami3637_RS08640 PF00137 ATP synthase subunit C Ami3637_RS08645 PF00430 ATP synthase B/B' CF(0) Ami3637_RS08650 PF00213 ATP synthase delta (OSCP) subunit Ami3637_RS08655 PF00306 ATP synthase alpha/beta chain, C terminal domain Ami3637_RS08655 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ami3637_RS08655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami3637_RS08660 PF00231 ATP synthase Ami3637_RS08665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Ami3637_RS08665 PF02874 ATP synthase alpha/beta family, beta-barrel domain Ami3637_RS08670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Ami3637_RS08670 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Ami3637_RS08680 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS08680 PF07694 5TMR of 5TMR-LYT Ami3637_RS08700 PF04023 FeoA domain Ami3637_RS08700 PF07664 Ferrous iron transport protein B C terminus Ami3637_RS08700 PF17910 FeoB cytosolic helical domain Ami3637_RS08700 PF02421 Ferrous iron transport protein B Ami3637_RS08700 PF07670 Nucleoside recognition Ami3637_RS08705 PF01551 Peptidase family M23 Ami3637_RS08705 PF10145 Phage-related minor tail protein Ami3637_RS08705 PF01464 Transglycosylase SLT domain Ami3637_RS08710 PF01842 ACT domain Ami3637_RS08710 PF03315 Serine dehydratase beta chain Ami3637_RS08720 PF01008 Initiation factor 2 subunit family Ami3637_RS08730 PF02616 Segregation and condensation protein ScpA Ami3637_RS08750 PF07943 Penicillin-binding protein 5, C-terminal domain Ami3637_RS08750 PF00768 D-alanyl-D-alanine carboxypeptidase Ami3637_RS08765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS08785 PF03788 LrgA family Ami3637_RS08790 PF04172 LrgB-like family Ami3637_RS08800 PF07729 FCD domain Ami3637_RS08800 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS08810 PF00731 AIR carboxylase Ami3637_RS08815 PF01259 SAICAR synthetase Ami3637_RS08820 PF00156 Phosphoribosyl transferase domain Ami3637_RS08825 PF00586 AIR synthase related protein, N-terminal domain Ami3637_RS08825 PF02769 AIR synthase related protein, C-terminal domain Ami3637_RS08830 PF00551 Formyl transferase Ami3637_RS08835 PF02142 MGS-like domain Ami3637_RS08835 PF01808 AICARFT/IMPCHase bienzyme Ami3637_RS08850 PF05569 BlaR1 peptidase M56 Ami3637_RS08850 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS08940 PF00072 Response regulator receiver domain Ami3637_RS08940 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS08950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS08950 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS08950 PF00989 PAS fold Ami3637_RS08950 PF16736 Single Cache-like Ami3637_RS08960 PF00873 AcrB/AcrD/AcrF family Ami3637_RS08970 PF13677 Membrane MotB of proton-channel complex MotA/MotB Ami3637_RS08970 PF00691 OmpA family Ami3637_RS08975 PF01479 S4 domain Ami3637_RS08975 PF00849 RNA pseudouridylate synthase Ami3637_RS08995 PF00072 Response regulator receiver domain Ami3637_RS09000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Ami3637_RS09000 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS09005 PF06445 GyrI-like small molecule binding domain Ami3637_RS09005 PF13411 MerR HTH family regulatory protein Ami3637_RS09010 PF18665 Tetracyclin repressor-like, C-terminal domain Ami3637_RS09010 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS09025 PF07690 Major Facilitator Superfamily Ami3637_RS09030 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS09030 PF00158 Sigma-54 interaction domain Ami3637_RS09030 PF13426 PAS domain Ami3637_RS09040 PF01546 Peptidase family M20/M25/M40 Ami3637_RS09045 PF00324 Amino acid permease Ami3637_RS09060 PF00395 S-layer homology domain Ami3637_RS09060 PF00963 Cohesin domain Ami3637_RS09080 PF00072 Response regulator receiver domain Ami3637_RS09080 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS09085 PF07689 KaiB domain Ami3637_RS09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS09085 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS09090 PF02687 FtsX-like permease family Ami3637_RS09090 PF12704 MacB-like periplasmic core domain Ami3637_RS09090 PF00005 ABC transporter Ami3637_RS09100 PF13932 GidA associated domain Ami3637_RS09100 PF01134 Glucose inhibited division protein A Ami3637_RS09100 PF13932 GidA associated domain Ami3637_RS09100 PF01134 Glucose inhibited division protein A Ami3637_RS09110 PF07085 DRTGG domain Ami3637_RS09110 PF02833 DHHA2 domain Ami3637_RS09110 PF01368 DHH family Ami3637_RS09110 PF00571 CBS domain Ami3637_RS09115 PF01546 Peptidase family M20/M25/M40 Ami3637_RS09115 PF07687 Peptidase dimerisation domain Ami3637_RS09120 PF07687 Peptidase dimerisation domain Ami3637_RS09120 PF01546 Peptidase family M20/M25/M40 Ami3637_RS09130 PF14698 Argininosuccinate lyase C-terminal Ami3637_RS09130 PF00206 Lyase Ami3637_RS09140 PF00111 2Fe-2S iron-sulfur cluster binding domain Ami3637_RS09140 PF01799 [2Fe-2S] binding domain Ami3637_RS09145 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Ami3637_RS09145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Ami3637_RS09145 PF01799 [2Fe-2S] binding domain Ami3637_RS09155 PF03061 Thioesterase superfamily Ami3637_RS09160 PF00158 Sigma-54 interaction domain Ami3637_RS09175 PF04055 Radical SAM superfamily Ami3637_RS09175 PF12544 Lysine-2,3-aminomutase Ami3637_RS09185 PF00488 MutS domain V Ami3637_RS09185 PF01713 Smr domain Ami3637_RS09190 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Ami3637_RS09195 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Ami3637_RS09195 PF02310 B12 binding domain Ami3637_RS09200 PF01144 Coenzyme A transferase Ami3637_RS09205 PF01144 Coenzyme A transferase Ami3637_RS09210 PF01584 CheW-like domain Ami3637_RS09210 PF00072 Response regulator receiver domain Ami3637_RS09230 PF01476 LysM domain Ami3637_RS09230 PF01520 N-acetylmuramoyl-L-alanine amidase Ami3637_RS09245 PF02773 S-adenosylmethionine synthetase, C-terminal domain Ami3637_RS09245 PF02772 S-adenosylmethionine synthetase, central domain Ami3637_RS09245 PF00438 S-adenosylmethionine synthetase, N-terminal domain Ami3637_RS09250 PF00696 Amino acid kinase family Ami3637_RS09250 PF13840 ACT domain Ami3637_RS09255 PF04204 Homoserine O-succinyltransferase Ami3637_RS09260 PF12801 4Fe-4S binding domain Ami3637_RS09265 PF03471 Transporter associated domain Ami3637_RS09265 PF00571 CBS domain Ami3637_RS09265 PF01595 Cyclin M transmembrane N-terminal domain Ami3637_RS09270 PF07517 SecA DEAD-like domain Ami3637_RS09270 PF07516 SecA Wing and Scaffold domain Ami3637_RS09270 PF01043 SecA preprotein cross-linking domain Ami3637_RS09270 PF02810 SEC-C motif Ami3637_RS09280 PF09371 Tex-like protein N-terminal domain Ami3637_RS09280 PF16921 Tex protein YqgF-like domain Ami3637_RS09280 PF17674 HHH domain Ami3637_RS09280 PF00575 S1 RNA binding domain Ami3637_RS09290 PF13419 Haloacid dehalogenase-like hydrolase Ami3637_RS09295 PF00534 Glycosyl transferases group 1 Ami3637_RS09295 PF13439 Glycosyltransferase Family 4 Ami3637_RS09300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ami3637_RS09300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Ami3637_RS09305 PF03060 Nitronate monooxygenase Ami3637_RS09310 PF00698 Acyl transferase domain Ami3637_RS09325 PF07977 FabA-like domain Ami3637_RS09330 PF03060 Nitronate monooxygenase Ami3637_RS09340 PF12705 PD-(D/E)XK nuclease superfamily Ami3637_RS09345 PF12705 PD-(D/E)XK nuclease superfamily Ami3637_RS09365 PF00293 NUDIX domain Ami3637_RS09365 PF09297 NADH pyrophosphatase zinc ribbon domain Ami3637_RS09400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS09400 PF00672 HAMP domain Ami3637_RS09400 PF02743 Cache domain Ami3637_RS09405 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS09405 PF00072 Response regulator receiver domain Ami3637_RS09540 PF00004 ATPase family associated with various cellular activities (AAA) Ami3637_RS09540 PF17758 Proteasomal ATPase OB N-terminal domain Ami3637_RS09540 PF16450 Proteasomal ATPase OB C-terminal domain Ami3637_RS09545 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS09545 PF00072 Response regulator receiver domain Ami3637_RS09550 PF07568 Histidine kinase Ami3637_RS09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS09550 PF12282 Signal transduction histidine kinase Ami3637_RS09555 PF10662 Ethanolamine utilisation - propanediol utilisation Ami3637_RS09560 PF00936 BMC domain Ami3637_RS09565 PF00072 Response regulator receiver domain Ami3637_RS09565 PF03861 ANTAR domain Ami3637_RS09570 PF07568 Histidine kinase Ami3637_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS09570 PF12282 Signal transduction histidine kinase Ami3637_RS09580 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Ami3637_RS09590 PF00936 BMC domain Ami3637_RS09595 PF00936 BMC domain Ami3637_RS09605 PF00936 BMC domain Ami3637_RS09610 PF00936 BMC domain Ami3637_RS09620 PF06130 Phosphate propanoyltransferase Ami3637_RS09630 PF03319 Ethanolamine utilisation protein EutN/carboxysome Ami3637_RS09690 PF02225 PA domain Ami3637_RS09690 PF04389 Peptidase family M28 Ami3637_RS09700 PF00501 AMP-binding enzyme Ami3637_RS09700 PF13193 AMP-binding enzyme C-terminal domain Ami3637_RS09705 PF00501 AMP-binding enzyme Ami3637_RS09710 PF01168 Alanine racemase, N-terminal domain Ami3637_RS09715 PF00892 EamA-like transporter family Ami3637_RS09720 PF00072 Response regulator receiver domain Ami3637_RS09720 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS09730 PF00005 ABC transporter Ami3637_RS09740 PF00072 Response regulator receiver domain Ami3637_RS09740 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS09745 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS09745 PF16736 Single Cache-like Ami3637_RS09745 PF00989 PAS fold Ami3637_RS09755 PF02557 D-alanyl-D-alanine carboxypeptidase Ami3637_RS09760 PF04397 LytTr DNA-binding domain Ami3637_RS09760 PF00072 Response regulator receiver domain Ami3637_RS09780 PF03551 Transcriptional regulator PadR-like family Ami3637_RS09805 PF06445 GyrI-like small molecule binding domain Ami3637_RS09805 PF13411 MerR HTH family regulatory protein Ami3637_RS09810 PF04474 Protein of unknown function (DUF554) Ami3637_RS09815 PF02915 Rubrerythrin Ami3637_RS09825 PF01106 NifU-like domain Ami3637_RS09835 PF01546 Peptidase family M20/M25/M40 Ami3637_RS09840 PF12822 ECF transporter, substrate-specific component Ami3637_RS09850 PF00814 Glycoprotease family Ami3637_RS09855 PF00583 Acetyltransferase (GNAT) family Ami3637_RS09865 PF00814 Glycoprotease family Ami3637_RS09870 PF12848 ABC transporter Ami3637_RS09870 PF16326 ABC transporter C-terminal domain Ami3637_RS09870 PF00005 ABC transporter Ami3637_RS09875 PF00550 Phosphopantetheine attachment site Ami3637_RS09880 PF02629 CoA binding domain Ami3637_RS09880 PF06971 Putative DNA-binding protein N-terminus Ami3637_RS09885 PF13187 4Fe-4S dicluster domain Ami3637_RS09900 PF04474 Protein of unknown function (DUF554) Ami3637_RS09905 PF00166 Chaperonin 10 Kd subunit Ami3637_RS09910 PF00118 TCP-1/cpn60 chaperonin family Ami3637_RS09915 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS09915 PF00072 Response regulator receiver domain Ami3637_RS09930 PF01235 Sodium:alanine symporter family Ami3637_RS09940 PF02557 D-alanyl-D-alanine carboxypeptidase Ami3637_RS09945 PF00478 IMP dehydrogenase / GMP reductase domain Ami3637_RS09945 PF00571 CBS domain Ami3637_RS09950 PF00117 Glutamine amidotransferase class-I Ami3637_RS09950 PF00958 GMP synthase C terminal domain Ami3637_RS09980 PF00395 S-layer homology domain Ami3637_RS09990 PF02796 Helix-turn-helix domain of resolvase Ami3637_RS09990 PF00239 Resolvase, N terminal domain Ami3637_RS10035 PF00561 alpha/beta hydrolase fold Ami3637_RS10115 PF00324 Amino acid permease Ami3637_RS10120 PF03466 LysR substrate binding domain Ami3637_RS10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS10125 PF01048 Phosphorylase superfamily Ami3637_RS10135 PF00291 Pyridoxal-phosphate dependent enzyme Ami3637_RS10165 PF06445 GyrI-like small molecule binding domain Ami3637_RS10165 PF12833 Helix-turn-helix domain Ami3637_RS10190 PF01594 AI-2E family transporter Ami3637_RS10200 PF18277 AbrB C-terminal domain Ami3637_RS10200 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ami3637_RS10210 PF01638 HxlR-like helix-turn-helix Ami3637_RS10215 PF00805 Pentapeptide repeats (8 copies) Ami3637_RS10220 PF02583 Metal-sensitive transcriptional repressor Ami3637_RS10225 PF00403 Heavy-metal-associated domain Ami3637_RS10230 PF02569 Pantoate-beta-alanine ligase Ami3637_RS10235 PF04073 Aminoacyl-tRNA editing domain Ami3637_RS10240 PF01554 MatE Ami3637_RS10245 PF00672 HAMP domain Ami3637_RS10245 PF02743 Cache domain Ami3637_RS10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS10255 PF02743 Cache domain Ami3637_RS10255 PF00672 HAMP domain Ami3637_RS10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS10260 PF09383 NIL domain Ami3637_RS10260 PF00005 ABC transporter Ami3637_RS10265 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS10270 PF03180 NLPA lipoprotein Ami3637_RS10280 PF01177 Asp/Glu/Hydantoin racemase Ami3637_RS10290 PF00572 Ribosomal protein L13 Ami3637_RS10295 PF00380 Ribosomal protein S9/S16 Ami3637_RS10300 PF00183 Hsp90 protein Ami3637_RS10310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Ami3637_RS10310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ami3637_RS10310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ami3637_RS10310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Ami3637_RS10320 PF00005 ABC transporter Ami3637_RS10325 PF00005 ABC transporter Ami3637_RS10325 PF12399 Branched-chain amino acid ATP-binding cassette transporter Ami3637_RS10330 PF11862 Domain of unknown function (DUF3382) Ami3637_RS10330 PF02653 Branched-chain amino acid transport system / permease component Ami3637_RS10335 PF02653 Branched-chain amino acid transport system / permease component Ami3637_RS10350 PF02261 Aspartate decarboxylase Ami3637_RS10355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ami3637_RS10360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Ami3637_RS10370 PF00890 FAD binding domain Ami3637_RS10370 PF02910 Fumarate reductase flavoprotein C-term Ami3637_RS10380 PF13085 2Fe-2S iron-sulfur cluster binding domain Ami3637_RS10380 PF13183 4Fe-4S dicluster domain Ami3637_RS10385 PF01661 Macro domain Ami3637_RS10405 PF01266 FAD dependent oxidoreductase Ami3637_RS10405 PF00355 Rieske [2Fe-2S] domain Ami3637_RS10410 PF01979 Amidohydrolase family Ami3637_RS10440 PF02654 Cobalamin-5-phosphate synthase Ami3637_RS10450 PF00005 ABC transporter Ami3637_RS10450 PF00664 ABC transporter transmembrane region Ami3637_RS10455 PF00664 ABC transporter transmembrane region Ami3637_RS10455 PF00005 ABC transporter Ami3637_RS10460 PF03099 Biotin/lipoate A/B protein ligase family Ami3637_RS10460 PF02237 Biotin protein ligase C terminal domain Ami3637_RS10460 PF08279 HTH domain Ami3637_RS10465 PF02632 BioY family Ami3637_RS10480 PF08264 Anticodon-binding domain of tRNA Ami3637_RS10480 PF01588 Putative tRNA binding domain Ami3637_RS10480 PF09334 tRNA synthetases class I (M) Ami3637_RS10485 PF00270 DEAD/DEAH box helicase Ami3637_RS10485 PF00271 Helicase conserved C-terminal domain Ami3637_RS10490 PF08281 Sigma-70, region 4 Ami3637_RS10490 PF04542 Sigma-70 region 2 Ami3637_RS10495 PF01425 Amidase Ami3637_RS10500 PF00672 HAMP domain Ami3637_RS10500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS10500 PF02203 Tar ligand binding domain homologue Ami3637_RS10510 PF00535 Glycosyl transferase family 2 Ami3637_RS10525 PF01026 TatD related DNase Ami3637_RS10540 PF07228 Stage II sporulation protein E (SpoIIE) Ami3637_RS10550 PF16326 ABC transporter C-terminal domain Ami3637_RS10550 PF12848 ABC transporter Ami3637_RS10550 PF00005 ABC transporter Ami3637_RS10555 PF01171 PP-loop family Ami3637_RS10555 PF11734 TilS substrate C-terminal domain Ami3637_RS10560 PF01434 Peptidase family M41 Ami3637_RS10560 PF00004 ATPase family associated with various cellular activities (AAA) Ami3637_RS10560 PF17862 AAA+ lid domain Ami3637_RS10565 PF13556 PucR C-terminal helix-turn-helix domain Ami3637_RS10565 PF06018 CodY GAF-like domain Ami3637_RS10565 PF17853 GGDEF-like domain Ami3637_RS10585 PF00364 Biotin-requiring enzyme Ami3637_RS10595 PF03309 Type III pantothenate kinase Ami3637_RS10600 PF01207 Dihydrouridine synthase (Dus) Ami3637_RS10605 PF01272 Transcription elongation factor, GreA/GreB, C-term Ami3637_RS10605 PF03449 Transcription elongation factor, N-terminal Ami3637_RS10615 PF01336 OB-fold nucleic acid binding domain Ami3637_RS10615 PF00152 tRNA synthetases class II (D, K and N) Ami3637_RS10620 PF17763 Glutaminase/Asparaginase C-terminal domain Ami3637_RS10620 PF00710 Asparaginase, N-terminal Ami3637_RS10630 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS10630 PF03764 Elongation factor G, domain IV Ami3637_RS10630 PF14492 Elongation Factor G, domain II Ami3637_RS10630 PF00679 Elongation factor G C-terminus Ami3637_RS10630 PF03144 Elongation factor Tu domain 2 Ami3637_RS10635 PF18073 Rubredoxin metal binding domain Ami3637_RS10640 PF13520 Amino acid permease Ami3637_RS10645 PF00072 Response regulator receiver domain Ami3637_RS10645 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS10650 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS10650 PF00672 HAMP domain Ami3637_RS10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS10655 PF02559 CarD-like/TRCF domain Ami3637_RS10665 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ami3637_RS10665 PF02542 YgbB family Ami3637_RS10670 PF04073 Aminoacyl-tRNA editing domain Ami3637_RS10670 PF03129 Anticodon binding domain Ami3637_RS10670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Ami3637_RS10675 PF03458 UPF0126 domain Ami3637_RS10680 PF13344 Haloacid dehalogenase-like hydrolase Ami3637_RS10680 PF00293 NUDIX domain Ami3637_RS10685 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ami3637_RS10690 PF01551 Peptidase family M23 Ami3637_RS10695 PF01406 tRNA synthetases class I (C) catalytic domain Ami3637_RS10695 PF09190 DALR domain Ami3637_RS10700 PF00636 Ribonuclease III domain Ami3637_RS10705 PF00303 Thymidylate synthase Ami3637_RS10710 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS10715 PF00186 Dihydrofolate reductase Ami3637_RS10720 PF00588 SpoU rRNA Methylase family Ami3637_RS10720 PF08032 RNA 2'-O ribose methyltransferase substrate binding Ami3637_RS10725 PF08281 Sigma-70, region 4 Ami3637_RS10725 PF04542 Sigma-70 region 2 Ami3637_RS10740 PF01575 MaoC like domain Ami3637_RS10750 PF00561 alpha/beta hydrolase fold Ami3637_RS10760 PF03144 Elongation factor Tu domain 2 Ami3637_RS10760 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS10760 PF03143 Elongation factor Tu C-terminal domain Ami3637_RS10775 PF03062 MBOAT, membrane-bound O-acyltransferase family Ami3637_RS10800 PF00471 Ribosomal protein L33 Ami3637_RS10805 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Ami3637_RS10810 PF02357 Transcription termination factor nusG Ami3637_RS10810 PF00467 KOW motif Ami3637_RS10815 PF03946 Ribosomal protein L11, N-terminal domain Ami3637_RS10815 PF00298 Ribosomal protein L11, RNA binding domain Ami3637_RS10820 PF00687 Ribosomal protein L1p/L10e family Ami3637_RS10825 PF00466 Ribosomal protein L10 Ami3637_RS10830 PF16320 Ribosomal protein L7/L12 dimerisation domain Ami3637_RS10830 PF00542 Ribosomal protein L7/L12 C-terminal domain Ami3637_RS10845 PF00164 Ribosomal protein S12/S23 Ami3637_RS10850 PF00177 Ribosomal protein S7p/S5e Ami3637_RS10860 PF03144 Elongation factor Tu domain 2 Ami3637_RS10860 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS10860 PF03143 Elongation factor Tu C-terminal domain Ami3637_RS10865 PF12850 Calcineurin-like phosphoesterase superfamily domain Ami3637_RS10880 PF04055 Radical SAM superfamily Ami3637_RS10880 PF06968 Biotin and Thiamin Synthesis associated domain Ami3637_RS10885 PF02632 BioY family Ami3637_RS10890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Ami3637_RS10890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Ami3637_RS10895 PF13361 UvrD-like helicase C-terminal domain Ami3637_RS10895 PF00580 UvrD/REP helicase N-terminal domain Ami3637_RS10900 PF12826 Helix-hairpin-helix motif Ami3637_RS10900 PF03120 NAD-dependent DNA ligase OB-fold domain Ami3637_RS10900 PF01653 NAD-dependent DNA ligase adenylation domain Ami3637_RS10900 PF00533 BRCA1 C Terminus (BRCT) domain Ami3637_RS10910 PF00395 S-layer homology domain Ami3637_RS10910 PF02903 Alpha amylase, N-terminal ig-like domain Ami3637_RS10910 PF00128 Alpha amylase, catalytic domain Ami3637_RS10930 PF12169 DNA polymerase III subunits gamma and tau domain III Ami3637_RS10935 PF02575 YbaB/EbfC DNA-binding family Ami3637_RS10940 PF13662 Toprim domain Ami3637_RS10940 PF02132 RecR protein Ami3637_RS10955 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ami3637_RS10955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ami3637_RS10955 PF10371 Domain of unknown function Ami3637_RS10955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami3637_RS10955 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ami3637_RS10960 PF00005 ABC transporter Ami3637_RS10970 PF00529 HlyD membrane-fusion protein of T1SS Ami3637_RS10970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Ami3637_RS10985 PF00285 Citrate synthase, C-terminal domain Ami3637_RS10990 PF12344 Ultra-violet resistance protein B Ami3637_RS10990 PF00271 Helicase conserved C-terminal domain Ami3637_RS10990 PF04851 Type III restriction enzyme, res subunit Ami3637_RS10990 PF17757 UvrB interaction domain Ami3637_RS10990 PF02151 UvrB/uvrC motif Ami3637_RS11000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Ami3637_RS11000 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain Ami3637_RS11000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Ami3637_RS11020 PF01116 Fructose-bisphosphate aldolase class-II Ami3637_RS11040 PF01479 S4 domain Ami3637_RS11040 PF00849 RNA pseudouridylate synthase Ami3637_RS11045 PF10502 Signal peptidase, peptidase S26 Ami3637_RS11050 PF01668 SmpB protein Ami3637_RS11070 PF02899 Phage integrase, N-terminal SAM-like domain Ami3637_RS11070 PF00589 Phage integrase family Ami3637_RS11095 PF04232 Stage V sporulation protein S (SpoVS) Ami3637_RS11115 PF06725 3D domain Ami3637_RS11115 PF01476 LysM domain Ami3637_RS11195 PF10668 Phage terminase small subunit Ami3637_RS11250 PF17481 Phage tail sheath protein beta-sandwich domain Ami3637_RS11250 PF17482 Phage tail sheath C-terminal domain Ami3637_RS11250 PF04984 Phage tail sheath protein subtilisin-like domain Ami3637_RS11255 PF09393 Phage tail tube protein Ami3637_RS11290 PF04865 Baseplate J-like protein Ami3637_RS11350 PF07581 The GLUG motif Ami3637_RS11350 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Ami3637_RS11365 PF03060 Nitronate monooxygenase Ami3637_RS11375 PF00155 Aminotransferase class I and II Ami3637_RS11375 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS11380 PF07687 Peptidase dimerisation domain Ami3637_RS11380 PF01546 Peptidase family M20/M25/M40 Ami3637_RS11385 PF01520 N-acetylmuramoyl-L-alanine amidase Ami3637_RS11385 PF04122 Putative cell wall binding repeat 2 Ami3637_RS11390 PF01047 MarR family Ami3637_RS11435 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Ami3637_RS11435 PF07581 The GLUG motif Ami3637_RS11440 PF07581 The GLUG motif Ami3637_RS11440 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Ami3637_RS11450 PF00892 EamA-like transporter family Ami3637_RS11455 PF01638 HxlR-like helix-turn-helix Ami3637_RS11490 PF01228 Glycine radical Ami3637_RS11490 PF02901 Pyruvate formate lyase-like Ami3637_RS11495 PF04055 Radical SAM superfamily Ami3637_RS11500 PF10114 Sensory domain found in PocR Ami3637_RS11500 PF12833 Helix-turn-helix domain Ami3637_RS11510 PF00248 Aldo/keto reductase family Ami3637_RS11515 PF12833 Helix-turn-helix domain Ami3637_RS11515 PF02311 AraC-like ligand binding domain Ami3637_RS11520 PF02607 B12 binding domain Ami3637_RS11520 PF02310 B12 binding domain Ami3637_RS11525 PF06253 Trimethylamine methyltransferase (MTTB) Ami3637_RS11530 PF06253 Trimethylamine methyltransferase (MTTB) Ami3637_RS11545 PF02607 B12 binding domain Ami3637_RS11545 PF02310 B12 binding domain Ami3637_RS11560 PF00970 Oxidoreductase FAD-binding domain Ami3637_RS11560 PF00111 2Fe-2S iron-sulfur cluster binding domain Ami3637_RS11560 PF00175 Oxidoreductase NAD-binding domain Ami3637_RS11570 PF06968 Biotin and Thiamin Synthesis associated domain Ami3637_RS11570 PF04055 Radical SAM superfamily Ami3637_RS11590 PF02492 CobW/HypB/UreG, nucleotide-binding domain Ami3637_RS11590 PF07683 Cobalamin synthesis protein cobW C-terminal domain Ami3637_RS11610 PF00672 HAMP domain Ami3637_RS11610 PF02203 Tar ligand binding domain homologue Ami3637_RS11610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS11615 PF01471 Putative peptidoglycan binding domain Ami3637_RS11615 PF07486 Cell Wall Hydrolase Ami3637_RS11630 PF05816 Toxic anion resistance protein (TelA) Ami3637_RS11640 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS11680 PF00350 Dynamin family Ami3637_RS11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS11690 PF08447 PAS fold Ami3637_RS11690 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS11690 PF00989 PAS fold Ami3637_RS11695 PF00072 Response regulator receiver domain Ami3637_RS11695 PF00158 Sigma-54 interaction domain Ami3637_RS11695 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS11700 PF13520 Amino acid permease Ami3637_RS11705 PF13520 Amino acid permease Ami3637_RS11710 PF00857 Isochorismatase family Ami3637_RS11715 PF13193 AMP-binding enzyme C-terminal domain Ami3637_RS11715 PF00501 AMP-binding enzyme Ami3637_RS11720 PF03062 MBOAT, membrane-bound O-acyltransferase family Ami3637_RS11725 PF00550 Phosphopantetheine attachment site Ami3637_RS11730 PF04914 DltD protein Ami3637_RS11750 PF00005 ABC transporter Ami3637_RS11765 PF00107 Zinc-binding dehydrogenase Ami3637_RS11765 PF08240 Alcohol dehydrogenase GroES-like domain Ami3637_RS11770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Ami3637_RS11770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Ami3637_RS11780 PF05025 RbsD / FucU transport protein family Ami3637_RS11785 PF00005 ABC transporter Ami3637_RS11790 PF02653 Branched-chain amino acid transport system / permease component Ami3637_RS11795 PF13407 Periplasmic binding protein domain Ami3637_RS11800 PF00132 Bacterial transferase hexapeptide (six repeats) Ami3637_RS11805 PF00072 Response regulator receiver domain Ami3637_RS11815 PF01212 Beta-eliminating lyase Ami3637_RS11820 PF00117 Glutamine amidotransferase class-I Ami3637_RS11820 PF06418 CTP synthase N-terminus Ami3637_RS11840 PF12116 Stage III sporulation protein D Ami3637_RS11850 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS11850 PF00072 Response regulator receiver domain Ami3637_RS11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS11860 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS11860 PF00672 HAMP domain Ami3637_RS11870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Ami3637_RS11880 PF00005 ABC transporter Ami3637_RS11885 PF12704 MacB-like periplasmic core domain Ami3637_RS11885 PF02687 FtsX-like permease family Ami3637_RS11885 PF00005 ABC transporter Ami3637_RS11890 PF02687 FtsX-like permease family Ami3637_RS11890 PF12704 MacB-like periplasmic core domain Ami3637_RS11915 PF03422 Carbohydrate binding module (family 6) Ami3637_RS11915 PF00457 Glycosyl hydrolases family 11 Ami3637_RS11915 PF01522 Polysaccharide deacetylase Ami3637_RS11930 PF01170 Putative RNA methylase family UPF0020 Ami3637_RS11930 PF02926 THUMP domain Ami3637_RS11935 PF00690 Cation transporter/ATPase, N-terminus Ami3637_RS11935 PF00689 Cation transporting ATPase, C-terminus Ami3637_RS11940 PF00117 Glutamine amidotransferase class-I Ami3637_RS11940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Ami3637_RS11945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Ami3637_RS11945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Ami3637_RS11945 PF02142 MGS-like domain Ami3637_RS11950 PF00072 Response regulator receiver domain Ami3637_RS11950 PF04397 LytTr DNA-binding domain Ami3637_RS11970 PF13520 Amino acid permease Ami3637_RS11980 PF07729 FCD domain Ami3637_RS11980 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS11985 PF01594 AI-2E family transporter Ami3637_RS11990 PF01228 Glycine radical Ami3637_RS11990 PF02901 Pyruvate formate lyase-like Ami3637_RS11995 PF04055 Radical SAM superfamily Ami3637_RS12025 PF02223 Thymidylate kinase Ami3637_RS12035 PF09115 DNA polymerase III, delta subunit, C terminal Ami3637_RS12045 PF05175 Methyltransferase small domain Ami3637_RS12065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Ami3637_RS12065 PF18277 AbrB C-terminal domain Ami3637_RS12075 PF01790 Prolipoprotein diacylglyceryl transferase Ami3637_RS12080 PF01926 50S ribosome-binding GTPase Ami3637_RS12080 PF06071 Protein of unknown function (DUF933) Ami3637_RS12085 PF01791 DeoC/LacD family aldolase Ami3637_RS12090 PF00899 ThiF family Ami3637_RS12095 PF02219 Methylenetetrahydrofolate reductase Ami3637_RS12105 PF02381 MraZ protein, putative antitoxin-like Ami3637_RS12120 PF05223 NTF2-like N-terminal transpeptidase domain Ami3637_RS12120 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS12120 PF03717 Penicillin-binding Protein dimerisation domain Ami3637_RS12130 PF03717 Penicillin-binding Protein dimerisation domain Ami3637_RS12130 PF03793 PASTA domain Ami3637_RS12130 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS12135 PF02875 Mur ligase family, glutamate ligase domain Ami3637_RS12135 PF01225 Mur ligase family, catalytic domain Ami3637_RS12135 PF08245 Mur ligase middle domain Ami3637_RS12140 PF01225 Mur ligase family, catalytic domain Ami3637_RS12140 PF02875 Mur ligase family, glutamate ligase domain Ami3637_RS12140 PF08245 Mur ligase middle domain Ami3637_RS12145 PF08245 Mur ligase middle domain Ami3637_RS12145 PF02875 Mur ligase family, glutamate ligase domain Ami3637_RS12145 PF01225 Mur ligase family, catalytic domain Ami3637_RS12150 PF00953 Glycosyl transferase family 4 Ami3637_RS12160 PF01098 Cell cycle protein Ami3637_RS12165 PF03033 Glycosyltransferase family 28 N-terminal domain Ami3637_RS12165 PF04101 Glycosyltransferase family 28 C-terminal domain Ami3637_RS12170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ami3637_RS12190 PF06947 Protein of unknown function (DUF1290) Ami3637_RS12195 PF00091 Tubulin/FtsZ family, GTPase domain Ami3637_RS12195 PF12327 FtsZ family, C-terminal domain Ami3637_RS12200 PF08032 RNA 2'-O ribose methyltransferase substrate binding Ami3637_RS12200 PF00588 SpoU rRNA Methylase family Ami3637_RS12205 PF01409 tRNA synthetases class II core domain (F) Ami3637_RS12205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Ami3637_RS12210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Ami3637_RS12210 PF03483 B3/4 domain Ami3637_RS12210 PF03147 Ferredoxin-fold anticodon binding domain Ami3637_RS12210 PF03484 tRNA synthetase B5 domain Ami3637_RS12210 PF01588 Putative tRNA binding domain Ami3637_RS12215 PF05164 Cell division protein ZapA Ami3637_RS12230 PF05746 DALR anticodon binding domain Ami3637_RS12230 PF03485 Arginyl tRNA synthetase N terminal domain Ami3637_RS12230 PF00750 tRNA synthetases class I (R) Ami3637_RS12295 PF12161 HsdM N-terminal domain Ami3637_RS12295 PF02384 N-6 DNA Methylase Ami3637_RS12300 PF01420 Type I restriction modification DNA specificity domain Ami3637_RS12305 PF12008 Type I restriction and modification enzyme - subunit R C terminal Ami3637_RS12305 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Ami3637_RS12305 PF18766 SWI2/SNF2 ATPase Ami3637_RS12325 PF09588 YqaJ-like viral recombinase domain Ami3637_RS12335 PF04002 RadC-like JAB domain Ami3637_RS12435 PF01139 tRNA-splicing ligase RtcB Ami3637_RS12440 PF10127 RNA repair pathway DNA polymerase beta family Ami3637_RS12445 PF01327 Polypeptide deformylase Ami3637_RS12450 PF00578 AhpC/TSA family Ami3637_RS12450 PF10417 C-terminal domain of 1-Cys peroxiredoxin Ami3637_RS12460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Ami3637_RS12460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Ami3637_RS12460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Ami3637_RS12485 PF13426 PAS domain Ami3637_RS12485 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS12485 PF00563 EAL domain Ami3637_RS12495 PF02203 Tar ligand binding domain homologue Ami3637_RS12495 PF00672 HAMP domain Ami3637_RS12495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS12500 PF01546 Peptidase family M20/M25/M40 Ami3637_RS12500 PF07687 Peptidase dimerisation domain Ami3637_RS12550 PF16326 ABC transporter C-terminal domain Ami3637_RS12550 PF12848 ABC transporter Ami3637_RS12550 PF00005 ABC transporter Ami3637_RS12565 PF00324 Amino acid permease Ami3637_RS12570 PF03030 Inorganic H+ pyrophosphatase Ami3637_RS12575 PF00936 BMC domain Ami3637_RS12580 PF10662 Ethanolamine utilisation - propanediol utilisation Ami3637_RS12585 PF03606 C4-dicarboxylate anaerobic carrier Ami3637_RS12595 PF14579 Helix-hairpin-helix motif Ami3637_RS12595 PF02811 PHP domain Ami3637_RS12595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ami3637_RS12595 PF01336 OB-fold nucleic acid binding domain Ami3637_RS12595 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ami3637_RS12600 PF00365 Phosphofructokinase Ami3637_RS12605 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS12605 PF17874 MalT-like TPR region Ami3637_RS12610 PF01502 Phosphoribosyl-AMP cyclohydrolase Ami3637_RS12610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Ami3637_RS12615 PF00977 Histidine biosynthesis protein Ami3637_RS12620 PF00977 Histidine biosynthesis protein Ami3637_RS12625 PF00117 Glutamine amidotransferase class-I Ami3637_RS12630 PF00475 Imidazoleglycerol-phosphate dehydratase Ami3637_RS12635 PF00155 Aminotransferase class I and II Ami3637_RS12640 PF00815 Histidinol dehydrogenase Ami3637_RS12645 PF01634 ATP phosphoribosyltransferase Ami3637_RS12650 PF13393 Histidyl-tRNA synthetase Ami3637_RS12660 PF07729 FCD domain Ami3637_RS12660 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS12665 PF00180 Isocitrate/isopropylmalate dehydrogenase Ami3637_RS12665 PF18324 Hypothetical protein TT1725 Ami3637_RS12670 PF00330 Aconitase family (aconitate hydratase) Ami3637_RS12675 PF10576 Iron-sulfur binding domain of endonuclease III Ami3637_RS12675 PF00730 HhH-GPD superfamily base excision DNA repair protein Ami3637_RS12675 PF00633 Helix-hairpin-helix motif Ami3637_RS12685 PF00873 AcrB/AcrD/AcrF family Ami3637_RS12690 PF00873 AcrB/AcrD/AcrF family Ami3637_RS12695 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS12695 PF16295 Tetracyclin repressor-like, C-terminal domain Ami3637_RS12700 PF07516 SecA Wing and Scaffold domain Ami3637_RS12700 PF01043 SecA preprotein cross-linking domain Ami3637_RS12700 PF07517 SecA DEAD-like domain Ami3637_RS12700 PF02810 SEC-C motif Ami3637_RS12705 PF03447 Homoserine dehydrogenase, NAD binding domain Ami3637_RS12705 PF01842 ACT domain Ami3637_RS12705 PF00742 Homoserine dehydrogenase Ami3637_RS12710 PF00588 SpoU rRNA Methylase family Ami3637_RS12715 PF04963 Sigma-54 factor, core binding domain Ami3637_RS12715 PF04552 Sigma-54, DNA binding domain Ami3637_RS12715 PF00309 Sigma-54 factor, Activator interacting domain (AID) Ami3637_RS12720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Ami3637_RS12720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ami3637_RS12730 PF00121 Triosephosphate isomerase Ami3637_RS12735 PF03952 Enolase, N-terminal domain Ami3637_RS12735 PF00113 Enolase, C-terminal TIM barrel domain Ami3637_RS12740 PF03840 Preprotein translocase SecG subunit Ami3637_RS12760 PF01680 SOR/SNZ family Ami3637_RS12765 PF01174 SNO glutamine amidotransferase family Ami3637_RS12770 PF07690 Major Facilitator Superfamily Ami3637_RS12775 PF01063 Amino-transferase class IV Ami3637_RS12795 PF17876 Cold shock domain Ami3637_RS12795 PF00575 S1 RNA binding domain Ami3637_RS12795 PF00773 RNB domain Ami3637_RS12795 PF08206 Ribonuclease B OB domain Ami3637_RS12800 PF00571 CBS domain Ami3637_RS12805 PF02386 Cation transport protein Ami3637_RS12810 PF02386 Cation transport protein Ami3637_RS12815 PF02080 TrkA-C domain Ami3637_RS12815 PF02254 TrkA-N domain Ami3637_RS12815 PF00999 Sodium/hydrogen exchanger family Ami3637_RS12820 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS12835 PF02021 Uncharacterised protein family UPF0102 Ami3637_RS12845 PF18255 DNA processing protein A sterile alpha motif domain Ami3637_RS12845 PF02481 DNA recombination-mediator protein A Ami3637_RS12850 PF01396 Topoisomerase DNA binding C4 zinc finger Ami3637_RS12850 PF01751 Toprim domain Ami3637_RS12850 PF01131 DNA topoisomerase Ami3637_RS12855 PF00227 Proteasome subunit Ami3637_RS12860 PF00004 ATPase family associated with various cellular activities (AAA) Ami3637_RS12860 PF07724 AAA domain (Cdc48 subfamily) Ami3637_RS12860 PF10431 C-terminal, D2-small domain, of ClpB protein Ami3637_RS12865 PF08222 CodY helix-turn-helix domain Ami3637_RS12865 PF06018 CodY GAF-like domain Ami3637_RS12875 PF13167 GTP-binding GTPase N-terminal Ami3637_RS12875 PF16360 GTP-binding GTPase Middle Region Ami3637_RS12875 PF01926 50S ribosome-binding GTPase Ami3637_RS12880 PF09186 Domain of unknown function (DUF1949) Ami3637_RS12880 PF01205 Uncharacterized protein family UPF0029 Ami3637_RS13025 PF00265 Thymidine kinase Ami3637_RS13030 PF04055 Radical SAM superfamily Ami3637_RS13030 PF16199 Radical_SAM C-terminal domain Ami3637_RS13040 PF17764 3′ DNA-binding domain (3′BD) Ami3637_RS13040 PF18074 Primosomal protein N C-terminal domain Ami3637_RS13040 PF00271 Helicase conserved C-terminal domain Ami3637_RS13040 PF04851 Type III restriction enzyme, res subunit Ami3637_RS13040 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Ami3637_RS13045 PF18074 Primosomal protein N C-terminal domain Ami3637_RS13045 PF17764 3′ DNA-binding domain (3′BD) Ami3637_RS13045 PF00271 Helicase conserved C-terminal domain Ami3637_RS13045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Ami3637_RS13045 PF04851 Type III restriction enzyme, res subunit Ami3637_RS13050 PF01327 Polypeptide deformylase Ami3637_RS13060 PF04298 Putative neutral zinc metallopeptidase Ami3637_RS13065 PF01029 NusB family Ami3637_RS13065 PF01189 16S rRNA methyltransferase RsmB/F Ami3637_RS13075 PF03793 PASTA domain Ami3637_RS13075 PF00069 Protein kinase domain Ami3637_RS13080 PF03793 PASTA domain Ami3637_RS13080 PF00069 Protein kinase domain Ami3637_RS13085 PF03193 RsgA GTPase Ami3637_RS13085 PF16745 RsgA N-terminal domain Ami3637_RS13090 PF00834 Ribulose-phosphate 3 epimerase family Ami3637_RS13095 PF00936 BMC domain Ami3637_RS13100 PF12848 ABC transporter Ami3637_RS13100 PF00005 ABC transporter Ami3637_RS13175 PF00155 Aminotransferase class I and II Ami3637_RS13175 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS13185 PF07687 Peptidase dimerisation domain Ami3637_RS13185 PF01546 Peptidase family M20/M25/M40 Ami3637_RS13190 PF01276 Orn/Lys/Arg decarboxylase, major domain Ami3637_RS13190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Ami3637_RS13200 PF00005 ABC transporter Ami3637_RS13205 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS13210 PF03590 Aspartate-ammonia ligase Ami3637_RS13215 PF08239 Bacterial SH3 domain Ami3637_RS13215 PF01520 N-acetylmuramoyl-L-alanine amidase Ami3637_RS13220 PF01343 Peptidase family S49 Ami3637_RS13225 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Ami3637_RS13230 PF02978 Signal peptide binding domain Ami3637_RS13230 PF02881 SRP54-type protein, helical bundle domain Ami3637_RS13230 PF00448 SRP54-type protein, GTPase domain Ami3637_RS13235 PF00886 Ribosomal protein S16 Ami3637_RS13245 PF01782 RimM N-terminal domain Ami3637_RS13245 PF05239 PRC-barrel domain Ami3637_RS13250 PF01746 tRNA (Guanine-1)-methyltransferase Ami3637_RS13260 PF01168 Alanine racemase, N-terminal domain Ami3637_RS13265 PF04472 Cell division protein SepF Ami3637_RS13275 PF05103 DivIVA protein Ami3637_RS13280 PF01252 Signal peptidase (SPase) II Ami3637_RS13285 PF00849 RNA pseudouridylate synthase Ami3637_RS13285 PF01479 S4 domain Ami3637_RS13300 PF05670 NFACT protein RNA binding domain Ami3637_RS13305 PF08340 Domain of unknown function (DUF1732) Ami3637_RS13305 PF03755 YicC-like family, N-terminal region Ami3637_RS13310 PF00625 Guanylate kinase Ami3637_RS13315 PF01192 RNA polymerase Rpb6 Ami3637_RS13325 PF00318 Ribosomal protein S2 Ami3637_RS13330 PF00889 Elongation factor TS Ami3637_RS13340 PF01966 HD domain Ami3637_RS13345 PF00696 Amino acid kinase family Ami3637_RS13350 PF01765 Ribosome recycling factor Ami3637_RS13355 PF01255 Putative undecaprenyl diphosphate synthase Ami3637_RS13365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ami3637_RS13365 PF13288 DXP reductoisomerase C-terminal domain Ami3637_RS13365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Ami3637_RS13370 PF17820 PDZ domain Ami3637_RS13370 PF02163 Peptidase family M50 Ami3637_RS13375 PF04551 GcpE protein Ami3637_RS13385 PF02811 PHP domain Ami3637_RS13385 PF14579 Helix-hairpin-helix motif Ami3637_RS13385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Ami3637_RS13385 PF11490 DNA polymerase III polC-type N-terminus II Ami3637_RS13385 PF00929 Exonuclease Ami3637_RS13385 PF07733 Bacterial DNA polymerase III alpha NTPase domain Ami3637_RS13390 PF14535 AMP-binding enzyme C-terminal domain Ami3637_RS13390 PF00501 AMP-binding enzyme Ami3637_RS13400 PF00501 AMP-binding enzyme Ami3637_RS13400 PF14535 AMP-binding enzyme C-terminal domain Ami3637_RS13410 PF17384 RimP C-terminal SH3 domain Ami3637_RS13410 PF02576 RimP N-terminal domain Ami3637_RS13415 PF00575 S1 RNA binding domain Ami3637_RS13415 PF08529 NusA N-terminal domain Ami3637_RS13415 PF13184 NusA-like KH domain Ami3637_RS13430 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS13430 PF11987 Translation-initiation factor 2 Ami3637_RS13430 PF04760 Translation initiation factor IF-2, N-terminal region Ami3637_RS13435 PF02033 Ribosome-binding factor A Ami3637_RS13440 PF02272 DHHA1 domain Ami3637_RS13440 PF01368 DHH family Ami3637_RS13450 PF01509 TruB family pseudouridylate synthase (N terminal domain) Ami3637_RS13450 PF16198 tRNA pseudouridylate synthase B C-terminal domain Ami3637_RS13455 PF06574 FAD synthetase Ami3637_RS13455 PF01687 Riboflavin kinase Ami3637_RS13460 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS13460 PF03707 Bacterial signalling protein N terminal repeat Ami3637_RS13460 PF00563 EAL domain Ami3637_RS13465 PF00312 Ribosomal protein S15 Ami3637_RS13475 PF00909 Ammonium Transporter Family Ami3637_RS13475 PF00672 HAMP domain Ami3637_RS13480 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS13480 PF00072 Response regulator receiver domain Ami3637_RS13485 PF00909 Ammonium Transporter Family Ami3637_RS13500 PF00884 Sulfatase Ami3637_RS13515 PF00465 Iron-containing alcohol dehydrogenase Ami3637_RS13525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Ami3637_RS13525 PF01872 RibD C-terminal domain Ami3637_RS13530 PF00677 Lumazine binding domain Ami3637_RS13535 PF00925 GTP cyclohydrolase II Ami3637_RS13535 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Ami3637_RS13540 PF00885 6,7-dimethyl-8-ribityllumazine synthase Ami3637_RS13550 PF03600 Citrate transporter Ami3637_RS13575 PF01177 Asp/Glu/Hydantoin racemase Ami3637_RS13580 PF02875 Mur ligase family, glutamate ligase domain Ami3637_RS13580 PF08245 Mur ligase middle domain Ami3637_RS13580 PF01225 Mur ligase family, catalytic domain Ami3637_RS13585 PF03600 Citrate transporter Ami3637_RS13595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Ami3637_RS13595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ami3637_RS13600 PF01820 D-ala D-ala ligase N-terminus Ami3637_RS13600 PF07478 D-ala D-ala ligase C-terminus Ami3637_RS13605 PF01427 D-ala-D-ala dipeptidase Ami3637_RS13610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ami3637_RS13610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ami3637_RS13615 PF00324 Amino acid permease Ami3637_RS13620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Ami3637_RS13620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Ami3637_RS13625 PF00696 Amino acid kinase family Ami3637_RS13630 PF01235 Sodium:alanine symporter family Ami3637_RS13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS13645 PF00324 Amino acid permease Ami3637_RS13695 PF01520 N-acetylmuramoyl-L-alanine amidase Ami3637_RS13705 PF03956 Lysine exporter LysO Ami3637_RS13710 PF10431 C-terminal, D2-small domain, of ClpB protein Ami3637_RS13710 PF07724 AAA domain (Cdc48 subfamily) Ami3637_RS13710 PF06689 ClpX C4-type zinc finger Ami3637_RS13720 PF00717 Peptidase S24-like Ami3637_RS13720 PF01726 LexA DNA binding domain Ami3637_RS13725 PF00707 Translation initiation factor IF-3, C-terminal domain Ami3637_RS13725 PF05198 Translation initiation factor IF-3, N-terminal domain Ami3637_RS13730 PF01632 Ribosomal protein L35 Ami3637_RS13735 PF00453 Ribosomal protein L20 Ami3637_RS13745 PF04542 Sigma-70 region 2 Ami3637_RS13745 PF04545 Sigma-70, region 4 Ami3637_RS13770 PF02686 Glu-tRNAGln amidotransferase C subunit Ami3637_RS13780 PF02934 GatB/GatE catalytic domain Ami3637_RS13780 PF02637 GatB domain Ami3637_RS13785 PF01336 OB-fold nucleic acid binding domain Ami3637_RS13785 PF00152 tRNA synthetases class II (D, K and N) Ami3637_RS13785 PF02938 GAD domain Ami3637_RS13800 PF05698 Bacterial trigger factor protein (TF) C-terminus Ami3637_RS13800 PF05697 Bacterial trigger factor protein (TF) Ami3637_RS13800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Ami3637_RS13805 PF05239 PRC-barrel domain Ami3637_RS13810 PF03477 ATP cone domain Ami3637_RS13815 PF02224 Cytidylate kinase Ami3637_RS13840 PF00324 Amino acid permease Ami3637_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS13845 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS13850 PF00072 Response regulator receiver domain Ami3637_RS13850 PF08769 Sporulation initiation factor Spo0A C terminal Ami3637_RS13855 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS13855 PF00072 Response regulator receiver domain Ami3637_RS13855 PF00158 Sigma-54 interaction domain Ami3637_RS13865 PF00005 ABC transporter Ami3637_RS13880 PF17152 Periplasmic sensor domain Ami3637_RS13880 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS13900 PF13408 Recombinase zinc beta ribbon domain Ami3637_RS13900 PF07508 Recombinase Ami3637_RS13900 PF00239 Resolvase, N terminal domain Ami3637_RS13910 PF04542 Sigma-70 region 2 Ami3637_RS13910 PF04545 Sigma-70, region 4 Ami3637_RS13920 PF04002 RadC-like JAB domain Ami3637_RS13945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ami3637_RS13950 PF01098 Cell cycle protein Ami3637_RS13955 PF01966 HD domain Ami3637_RS13955 PF00013 KH domain Ami3637_RS13955 PF12072 Domain of unknown function (DUF3552) Ami3637_RS13960 PF01554 MatE Ami3637_RS13965 PF00266 Aminotransferase class-V Ami3637_RS13970 PF02568 Thiamine biosynthesis protein (ThiI) Ami3637_RS13970 PF02926 THUMP domain Ami3637_RS13975 PF01740 STAS domain Ami3637_RS13980 PF13581 Histidine kinase-like ATPase domain Ami3637_RS13985 PF04545 Sigma-70, region 4 Ami3637_RS13985 PF04542 Sigma-70 region 2 Ami3637_RS13985 PF04539 Sigma-70 region 3 Ami3637_RS13990 PF02770 Acyl-CoA dehydrogenase, middle domain Ami3637_RS13990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Ami3637_RS13990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Ami3637_RS13995 PF01012 Electron transfer flavoprotein domain Ami3637_RS14000 PF00766 Electron transfer flavoprotein FAD-binding domain Ami3637_RS14000 PF01012 Electron transfer flavoprotein domain Ami3637_RS14000 PF13237 4Fe-4S dicluster domain Ami3637_RS14010 PF02545 Maf-like protein Ami3637_RS14015 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Ami3637_RS14020 PF07451 Stage V sporulation protein AD (SpoVAD) Ami3637_RS14050 PF00912 Transglycosylase Ami3637_RS14050 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS14065 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS14065 PF13567 Domain of unknown function (DUF4131) Ami3637_RS14065 PF03772 Competence protein Ami3637_RS14095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Ami3637_RS14095 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Ami3637_RS14095 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS14110 PF01810 LysE type translocator Ami3637_RS14120 PF00176 SNF2 family N-terminal domain Ami3637_RS14120 PF04434 SWIM zinc finger Ami3637_RS14120 PF00271 Helicase conserved C-terminal domain Ami3637_RS14125 PF00271 Helicase conserved C-terminal domain Ami3637_RS14125 PF00176 SNF2 family N-terminal domain Ami3637_RS14125 PF04434 SWIM zinc finger Ami3637_RS14135 PF01145 SPFH domain / Band 7 family Ami3637_RS14140 PF02743 Cache domain Ami3637_RS14140 PF00672 HAMP domain Ami3637_RS14140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS14145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ami3637_RS14145 PF00391 PEP-utilising enzyme, mobile domain Ami3637_RS14150 PF16925 Tetracyclin repressor-like, C-terminal domain Ami3637_RS14150 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS14155 PF00378 Enoyl-CoA hydratase/isomerase Ami3637_RS14165 PF02646 RmuC family Ami3637_RS14175 PF01676 Metalloenzyme superfamily Ami3637_RS14180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Ami3637_RS14180 PF02885 Glycosyl transferase family, helical bundle domain Ami3637_RS14180 PF00591 Glycosyl transferase family, a/b domain Ami3637_RS14195 PF16123 Hydroxyacylglutathione hydrolase C-terminus Ami3637_RS14195 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS14215 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS14215 PF13493 Domain of unknown function (DUF4118) Ami3637_RS14215 PF02702 Osmosensitive K+ channel His kinase sensor domain Ami3637_RS14220 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS14220 PF00072 Response regulator receiver domain Ami3637_RS14230 PF02254 TrkA-N domain Ami3637_RS14230 PF02080 TrkA-C domain Ami3637_RS14240 PF00768 D-alanyl-D-alanine carboxypeptidase Ami3637_RS14240 PF07943 Penicillin-binding protein 5, C-terminal domain Ami3637_RS14250 PF03749 Sugar fermentation stimulation protein RE domain Ami3637_RS14250 PF17746 SfsA N-terminal OB domain Ami3637_RS14310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ami3637_RS14320 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ami3637_RS14320 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ami3637_RS14325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami3637_RS14345 PF03466 LysR substrate binding domain Ami3637_RS14345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS14360 PF02673 Bacitracin resistance protein BacA Ami3637_RS14365 PF01381 Helix-turn-helix Ami3637_RS14375 PF00905 Penicillin binding protein transpeptidase domain Ami3637_RS14375 PF05569 BlaR1 peptidase M56 Ami3637_RS14380 PF01327 Polypeptide deformylase Ami3637_RS14395 PF02110 Hydroxyethylthiazole kinase family Ami3637_RS14405 PF13419 Haloacid dehalogenase-like hydrolase Ami3637_RS14410 PF08543 Phosphomethylpyrimidine kinase Ami3637_RS14410 PF02581 Thiamine monophosphate synthase Ami3637_RS14415 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase Ami3637_RS14415 PF04101 Glycosyltransferase family 28 C-terminal domain Ami3637_RS14430 PF01048 Phosphorylase superfamily Ami3637_RS14440 PF00501 AMP-binding enzyme Ami3637_RS14440 PF13193 AMP-binding enzyme C-terminal domain Ami3637_RS14460 PF02675 S-adenosylmethionine decarboxylase Ami3637_RS14465 PF03063 Prismane/CO dehydrogenase family Ami3637_RS14470 PF03063 Prismane/CO dehydrogenase family Ami3637_RS14480 PF04324 BFD-like [2Fe-2S] binding domain Ami3637_RS14480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ami3637_RS14480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Ami3637_RS14480 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS14480 PF18267 Rubredoxin NAD+ reductase C-terminal domain Ami3637_RS14485 PF03006 Haemolysin-III related Ami3637_RS14490 PF08448 PAS fold Ami3637_RS14490 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS14500 PF04260 Protein of unknown function (DUF436) Ami3637_RS14510 PF00155 Aminotransferase class I and II Ami3637_RS14510 PF00392 Bacterial regulatory proteins, gntR family Ami3637_RS14520 PF00072 Response regulator receiver domain Ami3637_RS14520 PF01966 HD domain Ami3637_RS14525 PF00005 ABC transporter Ami3637_RS14545 PF06445 GyrI-like small molecule binding domain Ami3637_RS14545 PF13411 MerR HTH family regulatory protein Ami3637_RS14550 PF18389 TrmO C-terminal domain Ami3637_RS14550 PF01980 tRNA-methyltransferase O Ami3637_RS14560 PF05067 Manganese containing catalase Ami3637_RS14565 PF00269 Small, acid-soluble spore proteins, alpha/beta type Ami3637_RS14570 PF02742 Iron dependent repressor, metal binding and dimerisation domain Ami3637_RS14570 PF01325 Iron dependent repressor, N-terminal DNA binding domain Ami3637_RS14580 PF17910 FeoB cytosolic helical domain Ami3637_RS14580 PF02421 Ferrous iron transport protein B Ami3637_RS14580 PF07670 Nucleoside recognition Ami3637_RS14580 PF07664 Ferrous iron transport protein B C terminus Ami3637_RS14585 PF00269 Small, acid-soluble spore proteins, alpha/beta type Ami3637_RS14600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS14600 PF02203 Tar ligand binding domain homologue Ami3637_RS14600 PF00672 HAMP domain Ami3637_RS14605 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Ami3637_RS14605 PF00391 PEP-utilising enzyme, mobile domain Ami3637_RS14625 PF01381 Helix-turn-helix Ami3637_RS14635 PF13520 Amino acid permease Ami3637_RS14675 PF05593 RHS Repeat Ami3637_RS14705 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family Ami3637_RS14760 PF05593 RHS Repeat Ami3637_RS14790 PF07905 Purine catabolism regulatory protein-like family Ami3637_RS14790 PF17853 GGDEF-like domain Ami3637_RS14790 PF13556 PucR C-terminal helix-turn-helix domain Ami3637_RS14795 PF02423 Ornithine cyclodeaminase/mu-crystallin family Ami3637_RS14800 PF00155 Aminotransferase class I and II Ami3637_RS14805 PF06018 CodY GAF-like domain Ami3637_RS14805 PF17853 GGDEF-like domain Ami3637_RS14805 PF13556 PucR C-terminal helix-turn-helix domain Ami3637_RS14810 PF00155 Aminotransferase class I and II Ami3637_RS14865 PF13538 UvrD-like helicase C-terminal domain Ami3637_RS14900 PF13091 PLD-like domain Ami3637_RS14900 PF13087 AAA domain Ami3637_RS14945 PF04073 Aminoacyl-tRNA editing domain Ami3637_RS14950 PF00117 Glutamine amidotransferase class-I Ami3637_RS14950 PF03352 Methyladenine glycosylase Ami3637_RS14950 PF13302 Acetyltransferase (GNAT) domain Ami3637_RS14950 PF13673 Acetyltransferase (GNAT) domain Ami3637_RS14950 PF00958 GMP synthase C terminal domain Ami3637_RS14965 PF00583 Acetyltransferase (GNAT) family Ami3637_RS14980 PF00149 Calcineurin-like phosphoesterase Ami3637_RS15010 PF13187 4Fe-4S dicluster domain Ami3637_RS15010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Ami3637_RS15010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ami3637_RS15015 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Ami3637_RS15015 PF00175 Oxidoreductase NAD-binding domain Ami3637_RS15020 PF17179 4Fe-4S dicluster domain Ami3637_RS15030 PF03352 Methyladenine glycosylase Ami3637_RS15030 PF00958 GMP synthase C terminal domain Ami3637_RS15030 PF13673 Acetyltransferase (GNAT) domain Ami3637_RS15030 PF00117 Glutamine amidotransferase class-I Ami3637_RS15030 PF13302 Acetyltransferase (GNAT) domain Ami3637_RS15090 PF00999 Sodium/hydrogen exchanger family Ami3637_RS15120 PF13520 Amino acid permease Ami3637_RS15125 PF07943 Penicillin-binding protein 5, C-terminal domain Ami3637_RS15125 PF00768 D-alanyl-D-alanine carboxypeptidase Ami3637_RS15130 PF04542 Sigma-70 region 2 Ami3637_RS15130 PF08281 Sigma-70, region 4 Ami3637_RS15135 PF11738 Protein of unknown function (DUF3298) Ami3637_RS15135 PF13739 Deacetylase PdaC Ami3637_RS15145 PF00893 Small Multidrug Resistance protein Ami3637_RS15165 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS15170 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS15175 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS15200 PF03459 TOBE domain Ami3637_RS15200 PF17912 MalK OB fold domain Ami3637_RS15200 PF00005 ABC transporter Ami3637_RS15230 PF04199 Putative cyclase Ami3637_RS15240 PF06968 Biotin and Thiamin Synthesis associated domain Ami3637_RS15240 PF04055 Radical SAM superfamily Ami3637_RS15255 PF00528 Binding-protein-dependent transport system inner membrane component Ami3637_RS15260 PF00005 ABC transporter Ami3637_RS15270 PF02492 CobW/HypB/UreG, nucleotide-binding domain Ami3637_RS15275 PF01638 HxlR-like helix-turn-helix Ami3637_RS15285 PF04060 Putative Fe-S cluster Ami3637_RS15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS15295 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS15295 PF00672 HAMP domain Ami3637_RS15300 PF00486 Transcriptional regulatory protein, C terminal Ami3637_RS15300 PF00072 Response regulator receiver domain Ami3637_RS15315 PF12837 4Fe-4S binding domain Ami3637_RS15315 PF12801 4Fe-4S binding domain Ami3637_RS15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS15330 PF03466 LysR substrate binding domain Ami3637_RS15340 PF01522 Polysaccharide deacetylase Ami3637_RS15340 PF13739 Deacetylase PdaC Ami3637_RS15340 PF11738 Protein of unknown function (DUF3298) Ami3637_RS15345 PF14268 YoaP-like Ami3637_RS15345 PF00583 Acetyltransferase (GNAT) family Ami3637_RS15350 PF00578 AhpC/TSA family Ami3637_RS15355 PF00072 Response regulator receiver domain Ami3637_RS15355 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS15360 PF11208 Protein of unknown function (DUF2992) Ami3637_RS15385 PF00149 Calcineurin-like phosphoesterase Ami3637_RS15385 PF12320 Type 5 capsule protein repressor C-terminal domain Ami3637_RS15390 PF13476 AAA domain Ami3637_RS15400 PF00082 Subtilase family Ami3637_RS15405 PF00072 Response regulator receiver domain Ami3637_RS15405 PF01966 HD domain Ami3637_RS15420 PF16658 Class II release factor RF3, C-terminal domain Ami3637_RS15420 PF00009 Elongation factor Tu GTP binding domain Ami3637_RS15420 PF03144 Elongation factor Tu domain 2 Ami3637_RS15435 PF12671 Putative amidase domain Ami3637_RS15445 PF02661 Fic/DOC family Ami3637_RS15455 PF02127 Aminopeptidase I zinc metalloprotease (M18) Ami3637_RS15460 PF00557 Metallopeptidase family M24 Ami3637_RS15460 PF01321 Creatinase/Prolidase N-terminal domain Ami3637_RS15470 PF00877 NlpC/P60 family Ami3637_RS15480 PF00877 NlpC/P60 family Ami3637_RS15480 PF01476 LysM domain Ami3637_RS15480 PF08239 Bacterial SH3 domain Ami3637_RS15485 PF01464 Transglycosylase SLT domain Ami3637_RS15490 PF02535 ZIP Zinc transporter Ami3637_RS15500 PF00005 ABC transporter Ami3637_RS15500 PF04954 Siderophore-interacting protein Ami3637_RS15500 PF08021 Siderophore-interacting FAD-binding domain Ami3637_RS15500 PF00664 ABC transporter transmembrane region Ami3637_RS15505 PF00664 ABC transporter transmembrane region Ami3637_RS15505 PF00005 ABC transporter Ami3637_RS15510 PF02673 Bacitracin resistance protein BacA Ami3637_RS15520 PF17874 MalT-like TPR region Ami3637_RS15520 PF00196 Bacterial regulatory proteins, luxR family Ami3637_RS15535 PF04371 Porphyromonas-type peptidyl-arginine deiminase Ami3637_RS15545 PF00155 Aminotransferase class I and II Ami3637_RS15560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS15560 PF12729 Four helix bundle sensory module for signal transduction Ami3637_RS15560 PF00672 HAMP domain Ami3637_RS15570 PF03785 Peptidase family C25, C terminal ig-like domain Ami3637_RS15570 PF01364 Peptidase family C25 Ami3637_RS15570 PF08126 Propeptide_C25 Ami3637_RS15570 PF18630 Peptidase M60 C-terminal domain Ami3637_RS15575 PF00324 Amino acid permease Ami3637_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Ami3637_RS15580 PF00512 His Kinase A (phospho-acceptor) domain Ami3637_RS15580 PF00989 PAS fold Ami3637_RS15580 PF08447 PAS fold Ami3637_RS15585 PF00158 Sigma-54 interaction domain Ami3637_RS15585 PF00072 Response regulator receiver domain Ami3637_RS15585 PF02954 Bacterial regulatory protein, Fis family Ami3637_RS15595 PF12729 Four helix bundle sensory module for signal transduction Ami3637_RS15595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS15595 PF00672 HAMP domain Ami3637_RS15610 PF01554 MatE Ami3637_RS15640 PF02899 Phage integrase, N-terminal SAM-like domain Ami3637_RS15640 PF00589 Phage integrase family Ami3637_RS15660 PF00561 alpha/beta hydrolase fold Ami3637_RS15680 PF03358 NADPH-dependent FMN reductase Ami3637_RS15685 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS15710 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS15715 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS15715 PF07694 5TMR of 5TMR-LYT Ami3637_RS15720 PF00072 Response regulator receiver domain Ami3637_RS15725 PF03073 TspO/MBR family Ami3637_RS15760 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Ami3637_RS15765 PF00148 Nitrogenase component 1 type Oxidoreductase Ami3637_RS15765 PF08369 Proto-chlorophyllide reductase 57 kD subunit Ami3637_RS15785 PF13635 Domain of unknown function (DUF4143) Ami3637_RS15785 PF13173 AAA domain Ami3637_RS15800 PF03062 MBOAT, membrane-bound O-acyltransferase family Ami3637_RS15810 PF00331 Glycosyl hydrolase family 10 Ami3637_RS15810 PF02018 Carbohydrate binding domain Ami3637_RS15810 PF00395 S-layer homology domain Ami3637_RS15810 PF06452 Carbohydrate family 9 binding domain-like Ami3637_RS15820 PF05193 Peptidase M16 inactive domain Ami3637_RS15820 PF00675 Insulinase (Peptidase family M16) Ami3637_RS15830 PF11760 Cobalamin synthesis G N-terminal Ami3637_RS15830 PF01890 Cobalamin synthesis G C-terminus Ami3637_RS15830 PF11761 Cobalamin biosynthesis central region Ami3637_RS15835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami3637_RS15840 PF07685 CobB/CobQ-like glutamine amidotransferase domain Ami3637_RS15840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Ami3637_RS15845 PF01888 CbiD Ami3637_RS15850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami3637_RS15855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Ami3637_RS15855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Ami3637_RS15865 PF00155 Aminotransferase class I and II Ami3637_RS15870 PF07685 CobB/CobQ-like glutamine amidotransferase domain Ami3637_RS15875 PF02570 Precorrin-8X methylmutase Ami3637_RS15895 PF01384 Phosphate transporter family Ami3637_RS15900 PF13286 Phosphohydrolase-associated domain Ami3637_RS15900 PF01966 HD domain Ami3637_RS15905 PF01807 CHC2 zinc finger Ami3637_RS15905 PF10410 DnaB-helicase binding domain of primase Ami3637_RS15905 PF08275 DNA primase catalytic core, N-terminal domain Ami3637_RS15910 PF08275 DNA primase catalytic core, N-terminal domain Ami3637_RS15910 PF01807 CHC2 zinc finger Ami3637_RS15910 PF10410 DnaB-helicase binding domain of primase Ami3637_RS15910 PF08278 DNA primase DnaG DnaB-binding Ami3637_RS15915 PF08275 DNA primase catalytic core, N-terminal domain Ami3637_RS15915 PF01807 CHC2 zinc finger Ami3637_RS15915 PF10410 DnaB-helicase binding domain of primase Ami3637_RS15920 PF03979 Sigma-70 factor, region 1.1 Ami3637_RS15920 PF04545 Sigma-70, region 4 Ami3637_RS15920 PF04539 Sigma-70 region 3 Ami3637_RS15920 PF00140 Sigma-70 factor, region 1.2 Ami3637_RS15920 PF04542 Sigma-70 region 2 Ami3637_RS15925 PF04816 tRNA (adenine(22)-N(1))-methyltransferase Ami3637_RS15930 PF01784 NIF3 (NGG1p interacting factor 3) Ami3637_RS15945 PF01554 MatE Ami3637_RS15960 PF01709 Transcriptional regulator Ami3637_RS15975 PF01226 Formate/nitrite transporter Ami3637_RS15990 PF03576 Peptidase family S58 Ami3637_RS15995 PF01061 ABC-2 type transporter Ami3637_RS16000 PF03471 Transporter associated domain Ami3637_RS16000 PF01595 Cyclin M transmembrane N-terminal domain Ami3637_RS16000 PF00571 CBS domain Ami3637_RS16005 PF02811 PHP domain Ami3637_RS16010 PF08281 Sigma-70, region 4 Ami3637_RS16010 PF04542 Sigma-70 region 2 Ami3637_RS16020 PF01367 5'-3' exonuclease, C-terminal SAM fold Ami3637_RS16020 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Ami3637_RS16020 PF00476 DNA polymerase family A Ami3637_RS16025 PF01121 Dephospho-CoA kinase Ami3637_RS16045 PF02699 Preprotein translocase subunit Ami3637_RS16055 PF02355 Protein export membrane protein Ami3637_RS16055 PF07549 SecD/SecF GG Motif Ami3637_RS16060 PF02824 TGS domain Ami3637_RS16060 PF13291 ACT domain Ami3637_RS16060 PF04607 Region found in RelA / SpoT proteins Ami3637_RS16065 PF02580 D-Tyr-tRNA(Tyr) deacylase Ami3637_RS16070 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS16075 PF04055 Radical SAM superfamily Ami3637_RS16080 PF13393 Histidyl-tRNA synthetase Ami3637_RS16080 PF03129 Anticodon binding domain Ami3637_RS16085 PF02938 GAD domain Ami3637_RS16085 PF00152 tRNA synthetases class II (D, K and N) Ami3637_RS16085 PF01336 OB-fold nucleic acid binding domain Ami3637_RS16090 PF01467 Cytidylyltransferase-like Ami3637_RS16095 PF01966 HD domain Ami3637_RS16105 PF08264 Anticodon-binding domain of tRNA Ami3637_RS16105 PF00133 tRNA synthetases class I (I, L, M and V) Ami3637_RS16105 PF13603 Leucyl-tRNA synthetase, Domain 2 Ami3637_RS16105 PF09334 tRNA synthetases class I (M) Ami3637_RS16110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Ami3637_RS16110 PF17770 Ribonuclease J C-terminal domain Ami3637_RS16110 PF00753 Metallo-beta-lactamase superfamily Ami3637_RS16115 PF06133 Control of competence regulator ComK, YlbF/YmcA Ami3637_RS16120 PF01132 Elongation factor P (EF-P) OB domain Ami3637_RS16120 PF08207 Elongation factor P (EF-P) KOW-like domain Ami3637_RS16120 PF09285 Elongation factor P, C-terminal Ami3637_RS16125 PF02618 YceG-like family Ami3637_RS16130 PF01596 O-methyltransferase Ami3637_RS16140 PF00571 CBS domain Ami3637_RS16140 PF03471 Transporter associated domain Ami3637_RS16140 PF01595 Cyclin M transmembrane N-terminal domain Ami3637_RS16165 PF06686 Stage III sporulation protein AC/AD protein family Ami3637_RS16170 PF00248 Aldo/keto reductase family Ami3637_RS16180 PF06135 IreB regulatory phosphoprotein Ami3637_RS16185 PF03652 Holliday junction resolvase Ami3637_RS16200 PF13411 MerR HTH family regulatory protein Ami3637_RS16210 PF00248 Aldo/keto reductase family Ami3637_RS16215 PF01042 Endoribonuclease L-PSP Ami3637_RS16225 PF02525 Flavodoxin-like fold Ami3637_RS16245 PF02915 Rubrerythrin Ami3637_RS16250 PF09924 Uncharacterised conserved protein (DUF2156) Ami3637_RS16250 PF03706 Lysylphosphatidylglycerol synthase TM region Ami3637_RS16255 PF09924 Uncharacterised conserved protein (DUF2156) Ami3637_RS16255 PF03706 Lysylphosphatidylglycerol synthase TM region Ami3637_RS16260 PF09924 Uncharacterised conserved protein (DUF2156) Ami3637_RS16260 PF03706 Lysylphosphatidylglycerol synthase TM region Ami3637_RS16275 PF00578 AhpC/TSA family Ami3637_RS16285 PF12801 4Fe-4S binding domain Ami3637_RS16285 PF04205 FMN-binding domain Ami3637_RS16290 PF14693 Ribosomal protein TL5, C-terminal domain Ami3637_RS16290 PF01386 Ribosomal L25p family Ami3637_RS16310 PF01476 LysM domain Ami3637_RS16315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Ami3637_RS16320 PF09335 SNARE associated Golgi protein Ami3637_RS16325 PF06838 Methionine gamma-lyase Ami3637_RS16330 PF00589 Phage integrase family Ami3637_RS16330 PF02899 Phage integrase, N-terminal SAM-like domain Ami3637_RS16340 PF08676 MutL C terminal dimerisation domain Ami3637_RS16340 PF01119 DNA mismatch repair protein, C-terminal domain Ami3637_RS16345 PF00488 MutS domain V Ami3637_RS16345 PF01624 MutS domain I Ami3637_RS16345 PF05188 MutS domain II Ami3637_RS16345 PF05192 MutS domain III Ami3637_RS16345 PF05190 MutS family domain IV Ami3637_RS16350 PF00155 Aminotransferase class I and II Ami3637_RS16365 PF00348 Polyprenyl synthetase Ami3637_RS16375 PF13742 OB-fold nucleic acid binding domain Ami3637_RS16375 PF02601 Exonuclease VII, large subunit Ami3637_RS16380 PF00814 Glycoprotease family Ami3637_RS16385 PF01029 NusB family Ami3637_RS16390 PF03780 Asp23 family, cell envelope-related function Ami3637_RS16415 PF01592 NifU-like N terminal domain Ami3637_RS16420 PF00266 Aminotransferase class-V Ami3637_RS16430 PF05979 Bacterial protein of unknown function (DUF896) Ami3637_RS16435 PF18010 Cry35Ab1 HTH C-terminal domain Ami3637_RS16435 PF00239 Resolvase, N terminal domain Ami3637_RS16440 PF00202 Aminotransferase class-III Ami3637_RS16445 PF00072 Response regulator receiver domain Ami3637_RS16445 PF08769 Sporulation initiation factor Spo0A C terminal Ami3637_RS16450 PF05580 SpoIVB peptidase S55 Ami3637_RS16450 PF17820 PDZ domain Ami3637_RS16460 PF10531 SLBB domain Ami3637_RS16470 PF04055 Radical SAM superfamily Ami3637_RS16470 PF06969 HemN C-terminal domain Ami3637_RS16490 PF01926 50S ribosome-binding GTPase Ami3637_RS16490 PF01018 GTP1/OBG Ami3637_RS16490 PF09269 Domain of unknown function (DUF1967) Ami3637_RS16495 PF01016 Ribosomal L27 protein Ami3637_RS16500 PF00829 Ribosomal prokaryotic L21 protein Ami3637_RS16505 PF00154 recA bacterial DNA recombination protein Ami3637_RS16515 PF01066 CDP-alcohol phosphatidyltransferase Ami3637_RS16520 PF00919 Uncharacterized protein family UPF0004 Ami3637_RS16520 PF18693 TRAM domain Ami3637_RS16520 PF04055 Radical SAM superfamily Ami3637_RS16595 PF01476 LysM domain Ami3637_RS16670 PF00589 Phage integrase family Ami3637_RS16675 PF02899 Phage integrase, N-terminal SAM-like domain Ami3637_RS16675 PF00589 Phage integrase family Ami3637_RS16740 PF00436 Single-strand binding protein family Ami3637_RS16750 PF13614 AAA domain Ami3637_RS16800 PF00239 Resolvase, N terminal domain Ami3637_RS16800 PF02796 Helix-turn-helix domain of resolvase Ami3637_RS16815 PF00701 Dihydrodipicolinate synthetase family Ami3637_RS16820 PF01783 Ribosomal L32p protein family Ami3637_RS16825 PF00871 Acetokinase family Ami3637_RS16830 PF05636 HIGH Nucleotidyl Transferase Ami3637_RS16845 PF01467 Cytidylyltransferase-like Ami3637_RS16855 PF00269 Small, acid-soluble spore proteins, alpha/beta type Ami3637_RS16860 PF17191 RecG wedge domain Ami3637_RS16860 PF00271 Helicase conserved C-terminal domain Ami3637_RS16860 PF00270 DEAD/DEAH box helicase Ami3637_RS16870 PF00830 Ribosomal L28 family Ami3637_RS16875 PF04055 Radical SAM superfamily Ami3637_RS16880 PF03477 ATP cone domain Ami3637_RS16880 PF13597 Anaerobic ribonucleoside-triphosphate reductase Ami3637_RS16900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Ami3637_RS16900 PF03466 LysR substrate binding domain Ami3637_RS16905 PF03601 Conserved hypothetical protein 698 Ami3637_RS16915 PF02203 Tar ligand binding domain homologue Ami3637_RS16915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS16915 PF00672 HAMP domain Ami3637_RS16920 PF02203 Tar ligand binding domain homologue Ami3637_RS16920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS16920 PF00672 HAMP domain Ami3637_RS16925 PF00672 HAMP domain Ami3637_RS16925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Ami3637_RS16925 PF17202 Single cache domain 3 Ami3637_RS16930 PF17932 Tetracyclin repressor-like, C-terminal domain Ami3637_RS16930 PF00440 Bacterial regulatory proteins, tetR family Ami3637_RS16935 PF00730 HhH-GPD superfamily base excision DNA repair protein Ami3637_RS16935 PF14815 NUDIX domain Ami3637_RS16945 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Ami3637_RS16945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Ami3637_RS16945 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Ami3637_RS16945 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Ami3637_RS16945 PF10371 Domain of unknown function Ami3637_RS16945 PF12838 4Fe-4S dicluster domain Ami3637_RS16955 PF00994 Probable molybdopterin binding domain Ami3637_RS16960 PF04055 Radical SAM superfamily Ami3637_RS16960 PF06463 Molybdenum Cofactor Synthesis C Ami3637_RS16965 PF08448 PAS fold Ami3637_RS16965 PF00990 Diguanylate cyclase, GGDEF domain Ami3637_RS17000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Ami3637_RS17000 PF07992 Pyridine nucleotide-disulphide oxidoreductase Ami3637_RS17015 PF04012 PspA/IM30 family Ami3637_RS17020 PF00395 S-layer homology domain