locus-tag class description AMICO_RS00005 PF00308 Bacterial dnaA protein AMICO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMICO_RS00005 PF11638 DnaA N-terminal domain AMICO_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMICO_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMICO_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMICO_RS00015 PF02463 RecF/RecN/SMC N terminal domain AMICO_RS00020 PF13932 GidA associated domain AMICO_RS00020 PF01134 Glucose inhibited division protein A AMICO_RS00035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMICO_RS00035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMICO_RS00040 PF02569 Pantoate-beta-alanine ligase AMICO_RS00045 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMICO_RS00045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMICO_RS00050 PF00701 Dihydrodipicolinate synthetase family AMICO_RS00055 PF01113 Dihydrodipicolinate reductase, N-terminus AMICO_RS00055 PF05173 Dihydrodipicolinate reductase, C-terminus AMICO_RS00060 PF00132 Bacterial transferase hexapeptide (six repeats) AMICO_RS00060 PF14602 Hexapeptide repeat of succinyl-transferase AMICO_RS00060 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AMICO_RS00065 PF00696 Amino acid kinase family AMICO_RS00065 PF13840 ACT domain AMICO_RS00065 PF01842 ACT domain AMICO_RS00080 PF10609 NUBPL iron-transfer P-loop NTPase AMICO_RS00095 PF01475 Ferric uptake regulator family AMICO_RS00105 PF02633 Creatinine amidohydrolase AMICO_RS00110 PF01979 Amidohydrolase family AMICO_RS00130 PF01791 DeoC/LacD family aldolase AMICO_RS00135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMICO_RS00135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMICO_RS00150 PF00270 DEAD/DEAH box helicase AMICO_RS00150 PF08148 DSHCT (NUC185) domain AMICO_RS00150 PF00271 Helicase conserved C-terminal domain AMICO_RS00155 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS00160 PF00005 ABC transporter AMICO_RS00160 PF00571 CBS domain AMICO_RS00180 PF00459 Inositol monophosphatase family AMICO_RS00185 PF02690 Na+/Pi-cotransporter AMICO_RS00190 PF02237 Biotin protein ligase C terminal domain AMICO_RS00190 PF03099 Biotin/lipoate A/B protein ligase family AMICO_RS00190 PF08279 HTH domain AMICO_RS00200 PF00005 ABC transporter AMICO_RS00205 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS00210 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS00225 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS00230 PF00005 ABC transporter AMICO_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS00250 PF03061 Thioesterase superfamily AMICO_RS00255 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AMICO_RS00255 PF04101 Glycosyltransferase family 28 C-terminal domain AMICO_RS00265 PF01032 FecCD transport family AMICO_RS00270 PF00005 ABC transporter AMICO_RS00285 PF00156 Phosphoribosyl transferase domain AMICO_RS00290 PF00403 Heavy-metal-associated domain AMICO_RS00310 PF00005 ABC transporter AMICO_RS00325 PF01891 Cobalt uptake substrate-specific transmembrane region AMICO_RS00335 PF02567 Phenazine biosynthesis-like protein AMICO_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS00345 PF00005 ABC transporter AMICO_RS00350 PF00291 Pyridoxal-phosphate dependent enzyme AMICO_RS00360 PF00155 Aminotransferase class I and II AMICO_RS00365 PF12801 4Fe-4S binding domain AMICO_RS00375 PF01842 ACT domain AMICO_RS00375 PF03315 Serine dehydratase beta chain AMICO_RS00380 PF03313 Serine dehydratase alpha chain AMICO_RS00390 PF03129 Anticodon binding domain AMICO_RS00390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMICO_RS00390 PF04073 Aminoacyl-tRNA editing domain AMICO_RS00400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMICO_RS00405 PF06196 Protein of unknown function (DUF997) AMICO_RS00410 PF00474 Sodium:solute symporter family AMICO_RS00415 PF01614 Bacterial transcriptional regulator AMICO_RS00415 PF09339 IclR helix-turn-helix domain AMICO_RS00420 PF02548 Ketopantoate hydroxymethyltransferase AMICO_RS00425 PF02558 Ketopantoate reductase PanE/ApbA AMICO_RS00425 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMICO_RS00430 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS00440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS00440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS00450 PF00881 Nitroreductase family AMICO_RS00455 PF01180 Dihydroorotate dehydrogenase AMICO_RS00460 PF00291 Pyridoxal-phosphate dependent enzyme AMICO_RS00465 PF00132 Bacterial transferase hexapeptide (six repeats) AMICO_RS00470 PF00180 Isocitrate/isopropylmalate dehydrogenase AMICO_RS00475 PF00694 Aconitase C-terminal domain AMICO_RS00480 PF00330 Aconitase family (aconitate hydratase) AMICO_RS00485 PF00682 HMGL-like AMICO_RS00485 PF08502 LeuA allosteric (dimerisation) domain AMICO_RS00490 PF10672 S-adenosylmethionine-dependent methyltransferase AMICO_RS00490 PF17785 PUA-like domain AMICO_RS00500 PF13237 4Fe-4S dicluster domain AMICO_RS00500 PF13375 RnfC Barrel sandwich hybrid domain AMICO_RS00500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMICO_RS00500 PF10531 SLBB domain AMICO_RS00505 PF03116 NQR2, RnfD, RnfE family AMICO_RS00510 PF04205 FMN-binding domain AMICO_RS00515 PF02508 Rnf-Nqr subunit, membrane protein AMICO_RS00520 PF02508 Rnf-Nqr subunit, membrane protein AMICO_RS00525 PF04060 Putative Fe-S cluster AMICO_RS00525 PF13187 4Fe-4S dicluster domain AMICO_RS00540 PF02424 ApbE family AMICO_RS00545 PF01235 Sodium:alanine symporter family AMICO_RS00550 PF03699 Uncharacterised protein family (UPF0182) AMICO_RS00555 PF01980 tRNA-methyltransferase O AMICO_RS00555 PF18389 TrmO C-terminal domain AMICO_RS00560 PF01042 Endoribonuclease L-PSP AMICO_RS00565 PF03313 Serine dehydratase alpha chain AMICO_RS00570 PF00155 Aminotransferase class I and II AMICO_RS00575 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AMICO_RS00575 PF02867 Ribonucleotide reductase, barrel domain AMICO_RS00580 PF09827 CRISPR associated protein Cas2 AMICO_RS00585 PF01930 Domain of unknown function DUF83 AMICO_RS00585 PF01867 CRISPR associated protein Cas1 AMICO_RS00605 PF18019 HD domain AMICO_RS00610 PF09559 Cas6 Crispr AMICO_RS00620 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS00620 PF07729 FCD domain AMICO_RS00625 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS00635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS00645 PF05683 Fumarase C-terminus AMICO_RS00650 PF10415 Fumarase C C-terminus AMICO_RS00650 PF00206 Lyase AMICO_RS00655 PF00390 Malic enzyme, N-terminal domain AMICO_RS00655 PF03949 Malic enzyme, NAD binding domain AMICO_RS00680 PF00155 Aminotransferase class I and II AMICO_RS00685 PF03401 Tripartite tricarboxylate transporter family receptor AMICO_RS00695 PF01970 Tripartite tricarboxylate transporter TctA family AMICO_RS00700 PF07836 DmpG-like communication domain AMICO_RS00700 PF00682 HMGL-like AMICO_RS00705 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMICO_RS00705 PF02772 S-adenosylmethionine synthetase, central domain AMICO_RS00705 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMICO_RS00720 PF00581 Rhodanese-like domain AMICO_RS00720 PF01206 Sulfurtransferase TusA AMICO_RS00735 PF01546 Peptidase family M20/M25/M40 AMICO_RS00745 PF13458 Periplasmic binding protein AMICO_RS00750 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS00755 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS00755 PF11862 Domain of unknown function (DUF3382) AMICO_RS00760 PF00005 ABC transporter AMICO_RS00760 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMICO_RS00765 PF00005 ABC transporter AMICO_RS00770 PF00155 Aminotransferase class I and II AMICO_RS00780 PF02082 Transcriptional regulator AMICO_RS00785 PF00266 Aminotransferase class-V AMICO_RS00790 PF01592 NifU-like N terminal domain AMICO_RS00800 PF03352 Methyladenine glycosylase AMICO_RS00805 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AMICO_RS00805 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AMICO_RS00810 PF16916 Dimerisation domain of Zinc Transporter AMICO_RS00810 PF01545 Cation efflux family AMICO_RS00815 PF01556 DnaJ C terminal domain AMICO_RS00815 PF00226 DnaJ domain AMICO_RS00820 PF00905 Penicillin binding protein transpeptidase domain AMICO_RS00820 PF00912 Transglycosylase AMICO_RS00820 PF06832 Penicillin-Binding Protein C-terminus Family AMICO_RS00825 PF01835 MG2 domain AMICO_RS00825 PF07703 Alpha-2-macroglobulin bait region domain AMICO_RS00825 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AMICO_RS00825 PF00207 Alpha-2-macroglobulin family AMICO_RS00825 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AMICO_RS00825 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AMICO_RS00825 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AMICO_RS00825 PF17962 Bacterial macroglobulin domain 6 AMICO_RS00830 PF02861 Clp amino terminal domain, pathogenicity island component AMICO_RS00830 PF07724 AAA domain (Cdc48 subfamily) AMICO_RS00830 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS00830 PF10431 C-terminal, D2-small domain, of ClpB protein AMICO_RS00830 PF17871 AAA lid domain AMICO_RS00835 PF03577 Peptidase family C69 AMICO_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS00840 PF17203 Single cache domain 3 AMICO_RS00840 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AMICO_RS00840 PF00989 PAS fold AMICO_RS00845 PF00072 Response regulator receiver domain AMICO_RS00870 PF03577 Peptidase family C69 AMICO_RS00885 PF00708 Acylphosphatase AMICO_RS00895 PF12544 Lysine-2,3-aminomutase AMICO_RS00895 PF04055 Radical SAM superfamily AMICO_RS00905 PF07478 D-ala D-ala ligase C-terminus AMICO_RS00905 PF01820 D-ala D-ala ligase N-terminus AMICO_RS00910 PF07478 D-ala D-ala ligase C-terminus AMICO_RS00920 PF04454 Encapsulating protein for peroxidase AMICO_RS00935 PF01613 Flavin reductase like domain AMICO_RS00940 PF01432 Peptidase family M3 AMICO_RS00940 PF08439 Oligopeptidase F AMICO_RS00945 PF03466 LysR substrate binding domain AMICO_RS00945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMICO_RS00950 PF01546 Peptidase family M20/M25/M40 AMICO_RS00950 PF07687 Peptidase dimerisation domain AMICO_RS00955 PF00464 Serine hydroxymethyltransferase AMICO_RS00965 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS00975 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS00975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS00980 PF07969 Amidohydrolase family AMICO_RS00985 PF07687 Peptidase dimerisation domain AMICO_RS00985 PF01546 Peptidase family M20/M25/M40 AMICO_RS00990 PF00696 Amino acid kinase family AMICO_RS00995 PF07969 Amidohydrolase family AMICO_RS01000 PF13556 PucR C-terminal helix-turn-helix domain AMICO_RS01000 PF17853 GGDEF-like domain AMICO_RS01000 PF05651 Putative sugar diacid recognition AMICO_RS01010 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS01020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS01020 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS01025 PF07969 Amidohydrolase family AMICO_RS01030 PF01168 Alanine racemase, N-terminal domain AMICO_RS01030 PF00842 Alanine racemase, C-terminal domain AMICO_RS01040 PF07664 Ferrous iron transport protein B C terminus AMICO_RS01040 PF17910 FeoB cytosolic helical domain AMICO_RS01040 PF02421 Ferrous iron transport protein B AMICO_RS01040 PF07670 Nucleoside recognition AMICO_RS01050 PF04055 Radical SAM superfamily AMICO_RS01055 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS01065 PF02535 ZIP Zinc transporter AMICO_RS01070 PF02659 Putative manganese efflux pump AMICO_RS01090 PF00486 Transcriptional regulatory protein, C terminal AMICO_RS01090 PF00072 Response regulator receiver domain AMICO_RS01095 PF09861 Lactate racemase N-terminal domain AMICO_RS01100 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMICO_RS01105 PF00155 Aminotransferase class I and II AMICO_RS01110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMICO_RS01110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMICO_RS01115 PF03553 Na+/H+ antiporter family AMICO_RS01120 PF01678 Diaminopimelate epimerase AMICO_RS01130 PF00534 Glycosyl transferases group 1 AMICO_RS01130 PF08323 Starch synthase catalytic domain AMICO_RS01135 PF00343 Carbohydrate phosphorylase AMICO_RS01135 PF11897 Protein of unknown function (DUF3417) AMICO_RS01140 PF02446 4-alpha-glucanotransferase AMICO_RS01145 PF00128 Alpha amylase, catalytic domain AMICO_RS01145 PF02806 Alpha amylase, C-terminal all-beta domain AMICO_RS01145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMICO_RS01155 PF00696 Amino acid kinase family AMICO_RS01155 PF01472 PUA domain AMICO_RS01160 PF00171 Aldehyde dehydrogenase family AMICO_RS01165 PF04474 Protein of unknown function (DUF554) AMICO_RS01170 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS01175 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS01180 PF00005 ABC transporter AMICO_RS01185 PF02608 ABC transporter substrate-binding protein PnrA-like AMICO_RS01190 PF00156 Phosphoribosyl transferase domain AMICO_RS01205 PF00534 Glycosyl transferases group 1 AMICO_RS01210 PF00982 Glycosyltransferase family 20 AMICO_RS01220 PF01996 F420-0:Gamma-glutamyl ligase AMICO_RS01220 PF00881 Nitroreductase family AMICO_RS01225 PF03989 DNA gyrase C-terminal domain, beta-propeller AMICO_RS01225 PF00521 DNA gyrase/topoisomerase IV, subunit A AMICO_RS01230 PF02666 Phosphatidylserine decarboxylase AMICO_RS01235 PF01066 CDP-alcohol phosphatidyltransferase AMICO_RS01240 PF08543 Phosphomethylpyrimidine kinase AMICO_RS01240 PF02581 Thiamine monophosphate synthase AMICO_RS01245 PF02110 Hydroxyethylthiazole kinase family AMICO_RS01250 PF02581 Thiamine monophosphate synthase AMICO_RS01260 PF09084 NMT1/THI5 like AMICO_RS01265 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS01270 PF00005 ABC transporter AMICO_RS01275 PF09515 Thiamine transporter protein (Thia_YuaJ) AMICO_RS01300 PF01039 Carboxyl transferase domain AMICO_RS01310 PF00364 Biotin-requiring enzyme AMICO_RS01315 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMICO_RS01325 PF17746 SfsA N-terminal OB domain AMICO_RS01325 PF03749 Sugar fermentation stimulation protein RE domain AMICO_RS01345 PF00654 Voltage gated chloride channel AMICO_RS01350 PF00375 Sodium:dicarboxylate symporter family AMICO_RS01355 PF01734 Patatin-like phospholipase AMICO_RS01355 PF00027 Cyclic nucleotide-binding domain AMICO_RS01360 PF09180 Prolyl-tRNA synthetase, C-terminal AMICO_RS01360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMICO_RS01360 PF03129 Anticodon binding domain AMICO_RS01365 PF02541 Ppx/GppA phosphatase family AMICO_RS01365 PF01761 3-dehydroquinate synthase AMICO_RS01370 PF02690 Na+/Pi-cotransporter AMICO_RS01375 PF01895 PhoU domain AMICO_RS01380 PF00581 Rhodanese-like domain AMICO_RS01415 PF00742 Homoserine dehydrogenase AMICO_RS01415 PF03447 Homoserine dehydrogenase, NAD binding domain AMICO_RS01425 PF02811 PHP domain AMICO_RS01430 PF01212 Beta-eliminating lyase AMICO_RS01435 PF01523 Putative modulator of DNA gyrase AMICO_RS01440 PF01520 N-acetylmuramoyl-L-alanine amidase AMICO_RS01440 PF11741 AMIN domain AMICO_RS01450 PF03725 3' exoribonuclease family, domain 2 AMICO_RS01450 PF01138 3' exoribonuclease family, domain 1 AMICO_RS01455 PF01725 Ham1 family AMICO_RS01460 PF03840 Preprotein translocase SecG subunit AMICO_RS01470 PF00572 Ribosomal protein L13 AMICO_RS01475 PF00380 Ribosomal protein S9/S16 AMICO_RS01480 PF00571 CBS domain AMICO_RS01480 PF01769 Divalent cation transporter AMICO_RS01480 PF03448 MgtE intracellular N domain AMICO_RS01495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMICO_RS01500 PF00873 AcrB/AcrD/AcrF family AMICO_RS01535 PF00072 Response regulator receiver domain AMICO_RS01535 PF00196 Bacterial regulatory proteins, luxR family AMICO_RS01550 PF03144 Elongation factor Tu domain 2 AMICO_RS01550 PF03143 Elongation factor Tu C-terminal domain AMICO_RS01550 PF00009 Elongation factor Tu GTP binding domain AMICO_RS01555 PF00471 Ribosomal protein L33 AMICO_RS01570 PF02357 Transcription termination factor nusG AMICO_RS01570 PF00467 KOW motif AMICO_RS01575 PF03946 Ribosomal protein L11, N-terminal domain AMICO_RS01575 PF00298 Ribosomal protein L11, RNA binding domain AMICO_RS01580 PF00687 Ribosomal protein L1p/L10e family AMICO_RS01585 PF00466 Ribosomal protein L10 AMICO_RS01590 PF00542 Ribosomal protein L7/L12 C-terminal domain AMICO_RS01590 PF16320 Ribosomal protein L7/L12 dimerisation domain AMICO_RS01595 PF04493 Endonuclease V AMICO_RS01635 PF09962 Uncharacterized conserved protein (DUF2196) AMICO_RS01645 PF03706 Lysylphosphatidylglycerol synthase TM region AMICO_RS01645 PF09924 Uncharacterised conserved protein (DUF2156) AMICO_RS01665 PF00892 EamA-like transporter family AMICO_RS01675 PF00730 HhH-GPD superfamily base excision DNA repair protein AMICO_RS01675 PF00633 Helix-hairpin-helix motif AMICO_RS01675 PF14815 NUDIX domain AMICO_RS01690 PF00593 TonB dependent receptor AMICO_RS01690 PF07715 TonB-dependent Receptor Plug Domain AMICO_RS01700 PF01032 FecCD transport family AMICO_RS01705 PF00005 ABC transporter AMICO_RS01715 PF02472 Biopolymer transport protein ExbD/TolR AMICO_RS01720 PF01618 MotA/TolQ/ExbB proton channel family AMICO_RS01725 PF00209 Sodium:neurotransmitter symporter family AMICO_RS01730 PF17284 Spermidine synthase tetramerisation domain AMICO_RS01735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMICO_RS01735 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMICO_RS01740 PF00753 Metallo-beta-lactamase superfamily AMICO_RS01745 PF02685 Glucokinase AMICO_RS01755 PF01209 ubiE/COQ5 methyltransferase family AMICO_RS01760 PF16326 ABC transporter C-terminal domain AMICO_RS01760 PF12848 ABC transporter AMICO_RS01760 PF00005 ABC transporter AMICO_RS01765 PF07690 Major Facilitator Superfamily AMICO_RS01770 PF00313 'Cold-shock' DNA-binding domain AMICO_RS01775 PF00270 DEAD/DEAH box helicase AMICO_RS01775 PF00271 Helicase conserved C-terminal domain AMICO_RS01780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMICO_RS01785 PF00873 AcrB/AcrD/AcrF family AMICO_RS01795 PF00892 EamA-like transporter family AMICO_RS01800 PF05651 Putative sugar diacid recognition AMICO_RS01800 PF13556 PucR C-terminal helix-turn-helix domain AMICO_RS01800 PF17853 GGDEF-like domain AMICO_RS01805 PF12683 Protein of unknown function (DUF3798) AMICO_RS01810 PF00005 ABC transporter AMICO_RS01830 PF01996 F420-0:Gamma-glutamyl ligase AMICO_RS01830 PF00881 Nitroreductase family AMICO_RS01835 PF12631 MnmE helical domain AMICO_RS01835 PF10396 GTP-binding protein TrmE N-terminus AMICO_RS01835 PF01926 50S ribosome-binding GTPase AMICO_RS01840 PF00155 Aminotransferase class I and II AMICO_RS01850 PF10145 Phage-related minor tail protein AMICO_RS01850 PF01464 Transglycosylase SLT domain AMICO_RS01850 PF01551 Peptidase family M23 AMICO_RS01855 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS01855 PF01434 Peptidase family M41 AMICO_RS01855 PF06480 FtsH Extracellular AMICO_RS01855 PF17862 AAA+ lid domain AMICO_RS01860 PF00155 Aminotransferase class I and II AMICO_RS01865 PF01676 Metalloenzyme superfamily AMICO_RS01865 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AMICO_RS01870 PF01966 HD domain AMICO_RS01875 PF00849 RNA pseudouridylate synthase AMICO_RS01885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMICO_RS01885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMICO_RS01890 PF01336 OB-fold nucleic acid binding domain AMICO_RS01890 PF00152 tRNA synthetases class II (D, K and N) AMICO_RS01895 PF13193 AMP-binding enzyme C-terminal domain AMICO_RS01895 PF00501 AMP-binding enzyme AMICO_RS01900 PF00294 pfkB family carbohydrate kinase AMICO_RS01900 PF01467 Cytidylyltransferase-like AMICO_RS01915 PF00155 Aminotransferase class I and II AMICO_RS01925 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS01925 PF07729 FCD domain AMICO_RS01930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMICO_RS01935 PF04298 Putative neutral zinc metallopeptidase AMICO_RS01945 PF01029 NusB family AMICO_RS01945 PF01189 16S rRNA methyltransferase RsmB/F AMICO_RS01950 PF00069 Protein kinase domain AMICO_RS01950 PF03793 PASTA domain AMICO_RS01955 PF00834 Ribulose-phosphate 3 epimerase family AMICO_RS01965 PF18693 TRAM domain AMICO_RS01965 PF00919 Uncharacterized protein family UPF0004 AMICO_RS01965 PF04055 Radical SAM superfamily AMICO_RS01970 PF04608 Phosphatidylglycerophosphatase A AMICO_RS01975 PF00994 Probable molybdopterin binding domain AMICO_RS01975 PF18146 Damage-inducible protein CinA KH domain AMICO_RS01975 PF02464 Competence-damaged protein AMICO_RS01980 PF02834 LigT like Phosphoesterase AMICO_RS01985 PF00154 recA bacterial DNA recombination protein AMICO_RS02005 PF02146 Sir2 family AMICO_RS02010 PF00860 Permease family AMICO_RS02020 PF13533 Biotin-lipoyl like AMICO_RS02025 PF00873 AcrB/AcrD/AcrF family AMICO_RS02030 PF01880 Desulfoferrodoxin AMICO_RS02030 PF06397 Desulfoferrodoxin, N-terminal domain AMICO_RS02035 PF00210 Ferritin-like domain AMICO_RS02045 PF00258 Flavodoxin AMICO_RS02045 PF00753 Metallo-beta-lactamase superfamily AMICO_RS02060 PF00710 Asparaginase, N-terminal AMICO_RS02060 PF17763 Glutaminase/Asparaginase C-terminal domain AMICO_RS02065 PF11700 Vacuole effluxer Atg22 like AMICO_RS02080 PF00196 Bacterial regulatory proteins, luxR family AMICO_RS02080 PF00072 Response regulator receiver domain AMICO_RS02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS02085 PF07730 Histidine kinase AMICO_RS02085 PF05384 Sensor protein DegS AMICO_RS02090 PF10996 Beta-Casp domain AMICO_RS02090 PF00753 Metallo-beta-lactamase superfamily AMICO_RS02090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMICO_RS02100 PF00579 tRNA synthetases class I (W and Y) AMICO_RS02100 PF01479 S4 domain AMICO_RS02105 PF03279 Bacterial lipid A biosynthesis acyltransferase AMICO_RS02115 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS02120 PF00005 ABC transporter AMICO_RS02125 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMICO_RS02125 PF00753 Metallo-beta-lactamase superfamily AMICO_RS02130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMICO_RS02130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMICO_RS02130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMICO_RS02130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMICO_RS02145 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS02145 PF07729 FCD domain AMICO_RS02150 PF02824 TGS domain AMICO_RS02150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS02150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMICO_RS02150 PF03129 Anticodon binding domain AMICO_RS02160 PF10609 NUBPL iron-transfer P-loop NTPase AMICO_RS02165 PF00753 Metallo-beta-lactamase superfamily AMICO_RS02165 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMICO_RS02175 PF06071 Protein of unknown function (DUF933) AMICO_RS02175 PF01926 50S ribosome-binding GTPase AMICO_RS02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS02195 PF00512 His Kinase A (phospho-acceptor) domain AMICO_RS02200 PF01226 Formate/nitrite transporter AMICO_RS02210 PF16193 AAA C-terminal domain AMICO_RS02210 PF12002 MgsA AAA+ ATPase C terminal AMICO_RS02210 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS02215 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS02215 PF07729 FCD domain AMICO_RS02220 PF01923 Cobalamin adenosyltransferase AMICO_RS02225 PF01614 Bacterial transcriptional regulator AMICO_RS02225 PF09339 IclR helix-turn-helix domain AMICO_RS02235 PF03737 Aldolase/RraA AMICO_RS02245 PF16868 NMT1-like family AMICO_RS02260 PF03328 HpcH/HpaI aldolase/citrate lyase family AMICO_RS02265 PF04223 Citrate lyase, alpha subunit (CitF) AMICO_RS02280 PF02384 N-6 DNA Methylase AMICO_RS02285 PF01420 Type I restriction modification DNA specificity domain AMICO_RS02290 PF11867 Domain of unknown function (DUF3387) AMICO_RS02290 PF18766 SWI2/SNF2 ATPase AMICO_RS02290 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMICO_RS02300 PF00795 Carbon-nitrogen hydrolase AMICO_RS02305 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS02310 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMICO_RS02315 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS02325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS02335 PF01053 Cys/Met metabolism PLP-dependent enzyme AMICO_RS02340 PF00689 Cation transporting ATPase, C-terminus AMICO_RS02340 PF00690 Cation transporter/ATPase, N-terminus AMICO_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS02360 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS02365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMICO_RS02385 PF01641 SelR domain AMICO_RS02390 PF00106 short chain dehydrogenase AMICO_RS02410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMICO_RS02410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMICO_RS02415 PF05552 Conserved TM helix AMICO_RS02415 PF00924 Mechanosensitive ion channel AMICO_RS02460 PF00005 ABC transporter AMICO_RS02465 PF00005 ABC transporter AMICO_RS02465 PF02687 FtsX-like permease family AMICO_RS02465 PF12704 MacB-like periplasmic core domain AMICO_RS02475 PF03447 Homoserine dehydrogenase, NAD binding domain AMICO_RS02475 PF01842 ACT domain AMICO_RS02475 PF00742 Homoserine dehydrogenase AMICO_RS02485 PF00313 'Cold-shock' DNA-binding domain AMICO_RS02495 PF02682 Carboxyltransferase domain, subdomain C and D AMICO_RS02500 PF02626 Carboxyltransferase domain, subdomain A and B AMICO_RS02505 PF03746 LamB/YcsF family AMICO_RS02510 PF07286 Protein of unknown function (DUF1445) AMICO_RS02515 PF00596 Class II Aldolase and Adducin N-terminal domain AMICO_RS02565 PF07729 FCD domain AMICO_RS02565 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS02585 PF00549 CoA-ligase AMICO_RS02585 PF08442 ATP-grasp domain AMICO_RS02590 PF02629 CoA binding domain AMICO_RS02590 PF00549 CoA-ligase AMICO_RS02600 PF00155 Aminotransferase class I and II AMICO_RS02605 PF03447 Homoserine dehydrogenase, NAD binding domain AMICO_RS02605 PF00742 Homoserine dehydrogenase AMICO_RS02605 PF01842 ACT domain AMICO_RS02625 PF01042 Endoribonuclease L-PSP AMICO_RS02630 PF03601 Conserved hypothetical protein 698 AMICO_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMICO_RS02635 PF03466 LysR substrate binding domain AMICO_RS02640 PF00291 Pyridoxal-phosphate dependent enzyme AMICO_RS02645 PF00501 AMP-binding enzyme AMICO_RS02645 PF14535 AMP-binding enzyme C-terminal domain AMICO_RS02650 PF05958 tRNA (Uracil-5-)-methyltransferase AMICO_RS02650 PF01938 TRAM domain AMICO_RS02670 PF16921 Tex protein YqgF-like domain AMICO_RS02670 PF17674 HHH domain AMICO_RS02670 PF00575 S1 RNA binding domain AMICO_RS02670 PF09371 Tex-like protein N-terminal domain AMICO_RS02680 PF04232 Stage V sporulation protein S (SpoVS) AMICO_RS02685 PF03129 Anticodon binding domain AMICO_RS02685 PF13393 Histidyl-tRNA synthetase AMICO_RS02690 PF01336 OB-fold nucleic acid binding domain AMICO_RS02690 PF02938 GAD domain AMICO_RS02690 PF00152 tRNA synthetases class II (D, K and N) AMICO_RS02695 PF12706 Beta-lactamase superfamily domain AMICO_RS02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMICO_RS02715 PF03466 LysR substrate binding domain AMICO_RS02720 PF04073 Aminoacyl-tRNA editing domain AMICO_RS02720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMICO_RS02720 PF03129 Anticodon binding domain AMICO_RS02735 PF17763 Glutaminase/Asparaginase C-terminal domain AMICO_RS02735 PF00710 Asparaginase, N-terminal AMICO_RS02745 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AMICO_RS02750 PF00448 SRP54-type protein, GTPase domain AMICO_RS02750 PF02881 SRP54-type protein, helical bundle domain AMICO_RS02750 PF02978 Signal peptide binding domain AMICO_RS02755 PF00886 Ribosomal protein S16 AMICO_RS02765 PF01782 RimM N-terminal domain AMICO_RS02765 PF05239 PRC-barrel domain AMICO_RS02770 PF01746 tRNA (Guanine-1)-methyltransferase AMICO_RS02770 PF09936 SAM-dependent RNA methyltransferase AMICO_RS02775 PF01245 Ribosomal protein L19 AMICO_RS02790 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AMICO_RS02790 PF01676 Metalloenzyme superfamily AMICO_RS02800 PF13380 CoA binding domain AMICO_RS02800 PF13607 Succinyl-CoA ligase like flavodoxin domain AMICO_RS02805 PF02660 Glycerol-3-phosphate acyltransferase AMICO_RS02810 PF05848 CtsR N-terminal HTH domain AMICO_RS02810 PF17727 CtsR C-terminal dimerization domain AMICO_RS02815 PF10431 C-terminal, D2-small domain, of ClpB protein AMICO_RS02815 PF02861 Clp amino terminal domain, pathogenicity island component AMICO_RS02815 PF17871 AAA lid domain AMICO_RS02815 PF07724 AAA domain (Cdc48 subfamily) AMICO_RS02815 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS02855 PF02675 S-adenosylmethionine decarboxylase AMICO_RS02870 PF00209 Sodium:neurotransmitter symporter family AMICO_RS02880 PF00291 Pyridoxal-phosphate dependent enzyme AMICO_RS02885 PF08544 GHMP kinases C terminal AMICO_RS02885 PF00288 GHMP kinases N terminal domain AMICO_RS02890 PF01842 ACT domain AMICO_RS02890 PF13840 ACT domain AMICO_RS02890 PF00696 Amino acid kinase family AMICO_RS02900 PF00005 ABC transporter AMICO_RS02910 PF03023 Lipid II flippase MurJ AMICO_RS02920 PF00814 Glycoprotease family AMICO_RS02925 PF00166 Chaperonin 10 Kd subunit AMICO_RS02930 PF00118 TCP-1/cpn60 chaperonin family AMICO_RS02935 PF00958 GMP synthase C terminal domain AMICO_RS02935 PF00117 Glutamine amidotransferase class-I AMICO_RS02935 PF02540 NAD synthase AMICO_RS02940 PF01594 AI-2E family transporter AMICO_RS02950 PF03030 Inorganic H+ pyrophosphatase AMICO_RS02955 PF01807 CHC2 zinc finger AMICO_RS02955 PF08275 DNA primase catalytic core, N-terminal domain AMICO_RS02955 PF10410 DnaB-helicase binding domain of primase AMICO_RS02960 PF01479 S4 domain AMICO_RS02965 PF03952 Enolase, N-terminal domain AMICO_RS02965 PF00113 Enolase, C-terminal TIM barrel domain AMICO_RS02970 PF06971 Putative DNA-binding protein N-terminus AMICO_RS02970 PF02629 CoA binding domain AMICO_RS02975 PF02699 Preprotein translocase subunit AMICO_RS02980 PF02355 Protein export membrane protein AMICO_RS02980 PF07549 SecD/SecF GG Motif AMICO_RS02985 PF02355 Protein export membrane protein AMICO_RS02985 PF07549 SecD/SecF GG Motif AMICO_RS02990 PF04055 Radical SAM superfamily AMICO_RS02990 PF13186 Iron-sulfur cluster-binding domain AMICO_RS03000 PF17768 RecJ OB domain AMICO_RS03000 PF01368 DHH family AMICO_RS03000 PF02272 DHHA1 domain AMICO_RS03000 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMICO_RS03005 PF04607 Region found in RelA / SpoT proteins AMICO_RS03005 PF02824 TGS domain AMICO_RS03005 PF13291 ACT domain AMICO_RS03010 PF02580 D-Tyr-tRNA(Tyr) deacylase AMICO_RS03015 PF00753 Metallo-beta-lactamase superfamily AMICO_RS03020 PF04002 RadC-like JAB domain AMICO_RS03040 PF00905 Penicillin binding protein transpeptidase domain AMICO_RS03040 PF03717 Penicillin-binding Protein dimerisation domain AMICO_RS03045 PF03775 Septum formation inhibitor MinC, C-terminal domain AMICO_RS03050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMICO_RS03055 PF03776 Septum formation topological specificity factor MinE AMICO_RS03060 PF01098 Cell cycle protein AMICO_RS03075 PF00575 S1 RNA binding domain AMICO_RS03075 PF10150 Ribonuclease E/G family AMICO_RS03080 PF02463 RecF/RecN/SMC N terminal domain AMICO_RS03080 PF06470 SMC proteins Flexible Hinge Domain AMICO_RS03085 PF05175 Methyltransferase small domain AMICO_RS03090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMICO_RS03095 PF08264 Anticodon-binding domain of tRNA AMICO_RS03095 PF09334 tRNA synthetases class I (M) AMICO_RS03095 PF01588 Putative tRNA binding domain AMICO_RS03100 PF01026 TatD related DNase AMICO_RS03105 PF01702 Queuine tRNA-ribosyltransferase AMICO_RS03110 PF03481 Putative GTP-binding controlling metal-binding AMICO_RS03110 PF01300 Telomere recombination AMICO_RS03120 PF04563 RNA polymerase beta subunit AMICO_RS03120 PF04561 RNA polymerase Rpb2, domain 2 AMICO_RS03120 PF04565 RNA polymerase Rpb2, domain 3 AMICO_RS03120 PF10385 RNA polymerase beta subunit external 1 domain AMICO_RS03120 PF00562 RNA polymerase Rpb2, domain 6 AMICO_RS03120 PF04560 RNA polymerase Rpb2, domain 7 AMICO_RS03125 PF04998 RNA polymerase Rpb1, domain 5 AMICO_RS03125 PF04997 RNA polymerase Rpb1, domain 1 AMICO_RS03125 PF00623 RNA polymerase Rpb1, domain 2 AMICO_RS03125 PF04983 RNA polymerase Rpb1, domain 3 AMICO_RS03125 PF05000 RNA polymerase Rpb1, domain 4 AMICO_RS03135 PF00164 Ribosomal protein S12/S23 AMICO_RS03140 PF00177 Ribosomal protein S7p/S5e AMICO_RS03145 PF03144 Elongation factor Tu domain 2 AMICO_RS03145 PF00679 Elongation factor G C-terminus AMICO_RS03145 PF00009 Elongation factor Tu GTP binding domain AMICO_RS03145 PF03764 Elongation factor G, domain IV AMICO_RS03145 PF14492 Elongation Factor G, domain II AMICO_RS03150 PF00009 Elongation factor Tu GTP binding domain AMICO_RS03150 PF03143 Elongation factor Tu C-terminal domain AMICO_RS03150 PF03144 Elongation factor Tu domain 2 AMICO_RS03155 PF00338 Ribosomal protein S10p/S20e AMICO_RS03160 PF00297 Ribosomal protein L3 AMICO_RS03165 PF00573 Ribosomal protein L4/L1 family AMICO_RS03170 PF00276 Ribosomal protein L23 AMICO_RS03175 PF00181 Ribosomal Proteins L2, RNA binding domain AMICO_RS03175 PF03947 Ribosomal Proteins L2, C-terminal domain AMICO_RS03180 PF00203 Ribosomal protein S19 AMICO_RS03185 PF00237 Ribosomal protein L22p/L17e AMICO_RS03190 PF00189 Ribosomal protein S3, C-terminal domain AMICO_RS03190 PF07650 KH domain AMICO_RS03195 PF00252 Ribosomal protein L16p/L10e AMICO_RS03200 PF00831 Ribosomal L29 protein AMICO_RS03205 PF00366 Ribosomal protein S17 AMICO_RS03210 PF00238 Ribosomal protein L14p/L23e AMICO_RS03215 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMICO_RS03215 PF00467 KOW motif AMICO_RS03220 PF00673 ribosomal L5P family C-terminus AMICO_RS03220 PF00281 Ribosomal protein L5 AMICO_RS03225 PF00253 Ribosomal protein S14p/S29e AMICO_RS03230 PF00410 Ribosomal protein S8 AMICO_RS03235 PF00347 Ribosomal protein L6 AMICO_RS03240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMICO_RS03245 PF03719 Ribosomal protein S5, C-terminal domain AMICO_RS03245 PF00333 Ribosomal protein S5, N-terminal domain AMICO_RS03250 PF00327 Ribosomal protein L30p/L7e AMICO_RS03255 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMICO_RS03260 PF00344 SecY translocase AMICO_RS03265 PF05191 Adenylate kinase, active site lid AMICO_RS03270 PF00557 Metallopeptidase family M24 AMICO_RS03280 PF01176 Translation initiation factor 1A / IF-1 AMICO_RS03285 PF00416 Ribosomal protein S13/S18 AMICO_RS03290 PF00411 Ribosomal protein S11 AMICO_RS03295 PF01479 S4 domain AMICO_RS03295 PF00163 Ribosomal protein S4/S9 N-terminal domain AMICO_RS03300 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMICO_RS03300 PF01000 RNA polymerase Rpb3/RpoA insert domain AMICO_RS03300 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMICO_RS03305 PF01196 Ribosomal protein L17 AMICO_RS03310 PF00005 ABC transporter AMICO_RS03315 PF00005 ABC transporter AMICO_RS03320 PF02361 Cobalt transport protein AMICO_RS03325 PF01416 tRNA pseudouridine synthase AMICO_RS03350 PF00583 Acetyltransferase (GNAT) family AMICO_RS03385 PF04060 Putative Fe-S cluster AMICO_RS03400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMICO_RS03400 PF01502 Phosphoribosyl-AMP cyclohydrolase AMICO_RS03405 PF00977 Histidine biosynthesis protein AMICO_RS03410 PF00977 Histidine biosynthesis protein AMICO_RS03415 PF00117 Glutamine amidotransferase class-I AMICO_RS03420 PF00475 Imidazoleglycerol-phosphate dehydratase AMICO_RS03425 PF01634 ATP phosphoribosyltransferase AMICO_RS03430 PF03129 Anticodon binding domain AMICO_RS03430 PF13393 Histidyl-tRNA synthetase AMICO_RS03435 PF00815 Histidinol dehydrogenase AMICO_RS03440 PF18073 Rubredoxin metal binding domain AMICO_RS03450 PF16200 C-terminal region of band_7 AMICO_RS03450 PF01145 SPFH domain / Band 7 family AMICO_RS03455 PF08264 Anticodon-binding domain of tRNA AMICO_RS03455 PF00133 tRNA synthetases class I (I, L, M and V) AMICO_RS03455 PF13603 Leucyl-tRNA synthetase, Domain 2 AMICO_RS03455 PF09334 tRNA synthetases class I (M) AMICO_RS03465 PF01649 Ribosomal protein S20 AMICO_RS03470 PF13307 Helicase C-terminal domain AMICO_RS03470 PF04851 Type III restriction enzyme, res subunit AMICO_RS03475 PF00468 Ribosomal protein L34 AMICO_RS03480 PF00825 Ribonuclease P AMICO_RS03485 PF01809 Putative membrane protein insertion efficiency factor AMICO_RS03490 PF02096 60Kd inner membrane protein AMICO_RS03490 PF14849 YidC periplasmic domain AMICO_RS03495 PF01424 R3H domain AMICO_RS03495 PF14804 Jag N-terminus AMICO_RS03505 PF13180 PDZ domain AMICO_RS03505 PF17820 PDZ domain AMICO_RS03510 PF00512 His Kinase A (phospho-acceptor) domain AMICO_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS03510 PF00672 HAMP domain AMICO_RS03515 PF00072 Response regulator receiver domain AMICO_RS03515 PF00486 Transcriptional regulatory protein, C terminal AMICO_RS03520 PF00312 Ribosomal protein S15 AMICO_RS03525 PF01138 3' exoribonuclease family, domain 1 AMICO_RS03525 PF03725 3' exoribonuclease family, domain 2 AMICO_RS03525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMICO_RS03525 PF00575 S1 RNA binding domain AMICO_RS03525 PF00013 KH domain AMICO_RS03530 PF00692 dUTPase AMICO_RS03535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS03535 PF02824 TGS domain AMICO_RS03535 PF03129 Anticodon binding domain AMICO_RS03535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMICO_RS03540 PF00707 Translation initiation factor IF-3, C-terminal domain AMICO_RS03540 PF05198 Translation initiation factor IF-3, N-terminal domain AMICO_RS03545 PF01632 Ribosomal protein L35 AMICO_RS03550 PF00453 Ribosomal protein L20 AMICO_RS03555 PF02386 Cation transport protein AMICO_RS03560 PF02080 TrkA-C domain AMICO_RS03560 PF02254 TrkA-N domain AMICO_RS03565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMICO_RS03565 PF01409 tRNA synthetases class II core domain (F) AMICO_RS03570 PF03483 B3/4 domain AMICO_RS03570 PF03484 tRNA synthetase B5 domain AMICO_RS03570 PF03147 Ferredoxin-fold anticodon binding domain AMICO_RS03570 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMICO_RS03570 PF01588 Putative tRNA binding domain AMICO_RS03590 PF00488 MutS domain V AMICO_RS03590 PF01713 Smr domain AMICO_RS03600 PF07837 Formiminotransferase domain, N-terminal subdomain AMICO_RS03600 PF02971 Formiminotransferase domain AMICO_RS03605 PF09339 IclR helix-turn-helix domain AMICO_RS03605 PF01614 Bacterial transcriptional regulator AMICO_RS03620 PF01411 tRNA synthetases class II (A) AMICO_RS03620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS03620 PF02272 DHHA1 domain AMICO_RS03625 PF16868 NMT1-like family AMICO_RS03635 PF01197 Ribosomal protein L31 AMICO_RS03640 PF02511 Thymidylate synthase complementing protein AMICO_RS03645 PF07136 Protein of unknown function (DUF1385) AMICO_RS03650 PF00472 RF-1 domain AMICO_RS03650 PF03462 PCRF domain AMICO_RS03655 PF05175 Methyltransferase small domain AMICO_RS03655 PF17827 PrmC N-terminal domain AMICO_RS03660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS03665 PF00294 pfkB family carbohydrate kinase AMICO_RS03685 PF02811 PHP domain AMICO_RS03685 PF01336 OB-fold nucleic acid binding domain AMICO_RS03685 PF14579 Helix-hairpin-helix motif AMICO_RS03685 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMICO_RS03685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMICO_RS03690 PF00391 PEP-utilising enzyme, mobile domain AMICO_RS03690 PF00224 Pyruvate kinase, barrel domain AMICO_RS03690 PF02887 Pyruvate kinase, alpha/beta domain AMICO_RS03700 PF01261 Xylose isomerase-like TIM barrel AMICO_RS03705 PF01168 Alanine racemase, N-terminal domain AMICO_RS03710 PF02457 DisA bacterial checkpoint controller nucleotide-binding AMICO_RS03720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMICO_RS03720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMICO_RS03720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMICO_RS03720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMICO_RS03725 PF00483 Nucleotidyl transferase AMICO_RS03730 PF01380 SIS domain AMICO_RS03740 PF13382 Adenine deaminase C-terminal domain AMICO_RS03740 PF01979 Amidohydrolase family AMICO_RS03755 PF12804 MobA-like NTP transferase domain AMICO_RS03755 PF00132 Bacterial transferase hexapeptide (six repeats) AMICO_RS03760 PF14572 Phosphoribosyl synthetase-associated domain AMICO_RS03760 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMICO_RS03765 PF14693 Ribosomal protein TL5, C-terminal domain AMICO_RS03765 PF01386 Ribosomal L25p family AMICO_RS03770 PF01195 Peptidyl-tRNA hydrolase AMICO_RS03775 PF17757 UvrB interaction domain AMICO_RS03775 PF03461 TRCF domain AMICO_RS03775 PF02559 CarD-like/TRCF domain AMICO_RS03775 PF00271 Helicase conserved C-terminal domain AMICO_RS03775 PF00270 DEAD/DEAH box helicase AMICO_RS03780 PF03819 MazG nucleotide pyrophosphohydrolase domain AMICO_RS03785 PF02436 Conserved carboxylase domain AMICO_RS03785 PF00364 Biotin-requiring enzyme AMICO_RS03785 PF00682 HMGL-like AMICO_RS03790 PF02562 PhoH-like protein AMICO_RS03800 PF02130 Uncharacterized protein family UPF0054 AMICO_RS03805 PF00571 CBS domain AMICO_RS03805 PF01595 Cyclin M transmembrane N-terminal domain AMICO_RS03805 PF03471 Transporter associated domain AMICO_RS03810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMICO_RS03815 PF01926 50S ribosome-binding GTPase AMICO_RS03815 PF07650 KH domain AMICO_RS03825 PF02091 Glycyl-tRNA synthetase alpha subunit AMICO_RS03830 PF02092 Glycyl-tRNA synthetase beta subunit AMICO_RS03830 PF05746 DALR anticodon binding domain AMICO_RS03835 PF03618 Kinase/pyrophosphorylase AMICO_RS03840 PF03618 Kinase/pyrophosphorylase AMICO_RS03845 PF02896 PEP-utilising enzyme, TIM barrel domain AMICO_RS03845 PF00391 PEP-utilising enzyme, mobile domain AMICO_RS03845 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMICO_RS03850 PF00391 PEP-utilising enzyme, mobile domain AMICO_RS03850 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMICO_RS03850 PF02896 PEP-utilising enzyme, TIM barrel domain AMICO_RS03855 PF17092 Penicillin-binding protein OB-like domain AMICO_RS03855 PF00912 Transglycosylase AMICO_RS03855 PF00905 Penicillin binding protein transpeptidase domain AMICO_RS03885 PF00437 Type II/IV secretion system protein AMICO_RS03885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMICO_RS03960 PF00156 Phosphoribosyl transferase domain AMICO_RS03965 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS03965 PF17862 AAA+ lid domain AMICO_RS03965 PF06480 FtsH Extracellular AMICO_RS03965 PF01434 Peptidase family M41 AMICO_RS03970 PF12344 Ultra-violet resistance protein B AMICO_RS03970 PF04851 Type III restriction enzyme, res subunit AMICO_RS03970 PF00271 Helicase conserved C-terminal domain AMICO_RS03970 PF17757 UvrB interaction domain AMICO_RS03970 PF02151 UvrB/uvrC motif AMICO_RS03975 PF17755 UvrA DNA-binding domain AMICO_RS03975 PF17760 UvrA interaction domain AMICO_RS03975 PF00005 ABC transporter AMICO_RS03980 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMICO_RS03980 PF00588 SpoU rRNA Methylase family AMICO_RS03985 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMICO_RS03985 PF03807 NADP oxidoreductase coenzyme F420-dependent AMICO_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS04000 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS04000 PF12911 N-terminal TM domain of oligopeptide transport permease C AMICO_RS04005 PF00005 ABC transporter AMICO_RS04005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS04010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS04010 PF00005 ABC transporter AMICO_RS04015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMICO_RS04025 PF01648 4'-phosphopantetheinyl transferase superfamily AMICO_RS04030 PF01256 Carbohydrate kinase AMICO_RS04030 PF03853 YjeF-related protein N-terminus AMICO_RS04035 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMICO_RS04040 PF00814 Glycoprotease family AMICO_RS04050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMICO_RS04050 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMICO_RS04050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMICO_RS04055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMICO_RS04075 PF05958 tRNA (Uracil-5-)-methyltransferase AMICO_RS04075 PF01938 TRAM domain AMICO_RS04090 PF01496 V-type ATPase 116kDa subunit family AMICO_RS04095 PF00137 ATP synthase subunit C AMICO_RS04100 PF01991 ATP synthase (E/31 kDa) subunit AMICO_RS04115 PF16886 ATPsynthase alpha/beta subunit N-term extension AMICO_RS04115 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMICO_RS04115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMICO_RS04120 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMICO_RS04120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMICO_RS04125 PF01813 ATP synthase subunit D AMICO_RS04130 PF02381 MraZ protein, putative antitoxin-like AMICO_RS04135 PF01795 MraW methylase family AMICO_RS04145 PF03717 Penicillin-binding Protein dimerisation domain AMICO_RS04145 PF00905 Penicillin binding protein transpeptidase domain AMICO_RS04150 PF08245 Mur ligase middle domain AMICO_RS04150 PF02875 Mur ligase family, glutamate ligase domain AMICO_RS04150 PF01225 Mur ligase family, catalytic domain AMICO_RS04155 PF01225 Mur ligase family, catalytic domain AMICO_RS04155 PF02875 Mur ligase family, glutamate ligase domain AMICO_RS04155 PF08245 Mur ligase middle domain AMICO_RS04160 PF00953 Glycosyl transferase family 4 AMICO_RS04165 PF08245 Mur ligase middle domain AMICO_RS04165 PF02875 Mur ligase family, glutamate ligase domain AMICO_RS04170 PF01098 Cell cycle protein AMICO_RS04175 PF04101 Glycosyltransferase family 28 C-terminal domain AMICO_RS04175 PF03033 Glycosyltransferase family 28 N-terminal domain AMICO_RS04180 PF02875 Mur ligase family, glutamate ligase domain AMICO_RS04180 PF08245 Mur ligase middle domain AMICO_RS04180 PF01225 Mur ligase family, catalytic domain AMICO_RS04185 PF01565 FAD binding domain AMICO_RS04185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMICO_RS04195 PF02491 SHS2 domain inserted in FTSA AMICO_RS04200 PF00091 Tubulin/FtsZ family, GTPase domain AMICO_RS04200 PF12327 FtsZ family, C-terminal domain AMICO_RS04220 PF04055 Radical SAM superfamily AMICO_RS04220 PF06463 Molybdenum Cofactor Synthesis C AMICO_RS04225 PF01967 MoaC family AMICO_RS04235 PF03668 P-loop ATPase protein family AMICO_RS04240 PF01933 Uncharacterised protein family UPF0052 AMICO_RS04245 PF10298 WhiA N-terminal LAGLIDADG-like domain AMICO_RS04245 PF02650 WhiA C-terminal HTH domain AMICO_RS04245 PF14527 WhiA LAGLIDADG-like domain AMICO_RS04250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMICO_RS04250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMICO_RS04255 PF00162 Phosphoglycerate kinase AMICO_RS04260 PF00121 Triosephosphate isomerase AMICO_RS04270 PF02421 Ferrous iron transport protein B AMICO_RS04270 PF17910 FeoB cytosolic helical domain AMICO_RS04270 PF07670 Nucleoside recognition AMICO_RS04270 PF07664 Ferrous iron transport protein B C terminus AMICO_RS04290 PF03816 Cell envelope-related transcriptional attenuator domain AMICO_RS04295 PF01467 Cytidylyltransferase-like AMICO_RS04300 PF09269 Domain of unknown function (DUF1967) AMICO_RS04300 PF01018 GTP1/OBG AMICO_RS04300 PF01926 50S ribosome-binding GTPase AMICO_RS04305 PF01016 Ribosomal L27 protein AMICO_RS04315 PF00829 Ribosomal prokaryotic L21 protein AMICO_RS04320 PF02463 RecF/RecN/SMC N terminal domain AMICO_RS04325 PF01513 ATP-NAD kinase AMICO_RS04330 PF01728 FtsJ-like methyltransferase AMICO_RS04330 PF01479 S4 domain AMICO_RS04335 PF02779 Transketolase, pyrimidine binding domain AMICO_RS04335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMICO_RS04335 PF02780 Transketolase, C-terminal domain AMICO_RS04340 PF00348 Polyprenyl synthetase AMICO_RS04345 PF02609 Exonuclease VII small subunit AMICO_RS04350 PF00830 Ribosomal L28 family AMICO_RS04365 PF01523 Putative modulator of DNA gyrase AMICO_RS04375 PF02618 YceG-like family AMICO_RS04385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMICO_RS04385 PF01871 AMMECR1 AMICO_RS04390 PF02547 Queuosine biosynthesis protein AMICO_RS04395 PF08486 Stage II sporulation protein AMICO_RS04395 PF04122 Putative cell wall binding repeat 2 AMICO_RS04400 PF11146 Protein of unknown function (DUF2905) AMICO_RS04405 PF17864 RuvB AAA lid domain AMICO_RS04405 PF05491 RuvB C-terminal winged helix domain AMICO_RS04405 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMICO_RS04410 PF01330 RuvA N terminal domain AMICO_RS04410 PF07499 RuvA, C-terminal domain AMICO_RS04415 PF02075 Crossover junction endodeoxyribonuclease RuvC AMICO_RS04420 PF01709 Transcriptional regulator AMICO_RS04425 PF02540 NAD synthase AMICO_RS04430 PF01402 Ribbon-helix-helix protein, copG family AMICO_RS04430 PF08753 NikR C terminal nickel binding domain AMICO_RS04440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMICO_RS04440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMICO_RS04445 PF04551 GcpE protein AMICO_RS04450 PF17820 PDZ domain AMICO_RS04450 PF02163 Peptidase family M50 AMICO_RS04455 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMICO_RS04455 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMICO_RS04455 PF13288 DXP reductoisomerase C-terminal domain AMICO_RS04465 PF01255 Putative undecaprenyl diphosphate synthase AMICO_RS04470 PF03167 Uracil DNA glycosylase superfamily AMICO_RS04485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMICO_RS04490 PF02350 UDP-N-acetylglucosamine 2-epimerase AMICO_RS04495 PF00953 Glycosyl transferase family 4 AMICO_RS04505 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMICO_RS04520 PF01039 Carboxyl transferase domain AMICO_RS04530 PF01642 Methylmalonyl-CoA mutase AMICO_RS04530 PF02310 B12 binding domain AMICO_RS04535 PF02310 B12 binding domain AMICO_RS04535 PF01642 Methylmalonyl-CoA mutase AMICO_RS04545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMICO_RS04545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMICO_RS04555 PF08245 Mur ligase middle domain AMICO_RS04555 PF02875 Mur ligase family, glutamate ligase domain AMICO_RS04560 PF00133 tRNA synthetases class I (I, L, M and V) AMICO_RS04560 PF08264 Anticodon-binding domain of tRNA AMICO_RS04560 PF10458 Valyl tRNA synthetase tRNA binding arm AMICO_RS04565 PF01926 50S ribosome-binding GTPase AMICO_RS04570 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMICO_RS04570 PF05362 Lon protease (S16) C-terminal proteolytic domain AMICO_RS04570 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS04575 PF06689 ClpX C4-type zinc finger AMICO_RS04575 PF07724 AAA domain (Cdc48 subfamily) AMICO_RS04575 PF10431 C-terminal, D2-small domain, of ClpB protein AMICO_RS04580 PF00574 Clp protease AMICO_RS04585 PF05698 Bacterial trigger factor protein (TF) C-terminus AMICO_RS04585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMICO_RS04585 PF05697 Bacterial trigger factor protein (TF) AMICO_RS04590 PF00313 'Cold-shock' DNA-binding domain AMICO_RS04595 PF01979 Amidohydrolase family AMICO_RS04600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMICO_RS04600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMICO_RS04620 PF04011 LemA family AMICO_RS04635 PF00005 ABC transporter AMICO_RS04635 PF08402 TOBE domain AMICO_RS04640 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS04660 PF03313 Serine dehydratase alpha chain AMICO_RS04670 PF00330 Aconitase family (aconitate hydratase) AMICO_RS04680 PF03313 Serine dehydratase alpha chain AMICO_RS04685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS04685 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS04700 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMICO_RS04725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS04740 PF13619 KTSC domain AMICO_RS04800 PF13091 PLD-like domain AMICO_RS04800 PF13396 Phospholipase_D-nuclease N-terminal AMICO_RS04805 PF00149 Calcineurin-like phosphoesterase AMICO_RS04860 PF03796 DnaB-like helicase C terminal domain AMICO_RS04860 PF00772 DnaB-like helicase N terminal domain AMICO_RS04885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMICO_RS04885 PF13378 Enolase C-terminal domain-like AMICO_RS04910 PF05670 NFACT protein RNA binding domain AMICO_RS04915 PF01479 S4 domain AMICO_RS04915 PF00849 RNA pseudouridylate synthase AMICO_RS04920 PF08264 Anticodon-binding domain of tRNA AMICO_RS04920 PF00133 tRNA synthetases class I (I, L, M and V) AMICO_RS04920 PF06827 Zinc finger found in FPG and IleRS AMICO_RS04950 PF00817 impB/mucB/samB family AMICO_RS04950 PF11798 IMS family HHH motif AMICO_RS04950 PF11799 impB/mucB/samB family C-terminal domain AMICO_RS04950 PF13438 Domain of unknown function (DUF4113) AMICO_RS04955 PF06574 FAD synthetase AMICO_RS04955 PF01687 Riboflavin kinase AMICO_RS04960 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMICO_RS04960 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMICO_RS04965 PF01368 DHH family AMICO_RS04965 PF02272 DHHA1 domain AMICO_RS04970 PF02033 Ribosome-binding factor A AMICO_RS04980 PF04760 Translation initiation factor IF-2, N-terminal region AMICO_RS04980 PF00009 Elongation factor Tu GTP binding domain AMICO_RS04980 PF11987 Translation-initiation factor 2 AMICO_RS04990 PF04296 Protein of unknown function (DUF448) AMICO_RS04995 PF13184 NusA-like KH domain AMICO_RS04995 PF08529 NusA N-terminal domain AMICO_RS04995 PF00575 S1 RNA binding domain AMICO_RS05000 PF17384 RimP C-terminal SH3 domain AMICO_RS05000 PF02576 RimP N-terminal domain AMICO_RS05005 PF00571 CBS domain AMICO_RS05005 PF00478 IMP dehydrogenase / GMP reductase domain AMICO_RS05010 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMICO_RS05015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMICO_RS05015 PF02542 YgbB family AMICO_RS05025 PF13662 Toprim domain AMICO_RS05025 PF02132 RecR protein AMICO_RS05030 PF02575 YbaB/EbfC DNA-binding family AMICO_RS05035 PF02590 Predicted SPOUT methyltransferase AMICO_RS05040 PF01813 ATP synthase subunit D AMICO_RS05045 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMICO_RS05045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMICO_RS05050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMICO_RS05050 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMICO_RS05050 PF16886 ATPsynthase alpha/beta subunit N-term extension AMICO_RS05075 PF18670 V-type ATPase subunit I, N-terminal domain AMICO_RS05075 PF01496 V-type ATPase 116kDa subunit family AMICO_RS05085 PF00571 CBS domain AMICO_RS05085 PF01743 Poly A polymerase head domain AMICO_RS05090 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMICO_RS05095 PF07687 Peptidase dimerisation domain AMICO_RS05095 PF01546 Peptidase family M20/M25/M40 AMICO_RS05100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMICO_RS05100 PF02403 Seryl-tRNA synthetase N-terminal domain AMICO_RS05105 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMICO_RS05110 PF00925 GTP cyclohydrolase II AMICO_RS05110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMICO_RS05115 PF00677 Lumazine binding domain AMICO_RS05120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMICO_RS05120 PF01872 RibD C-terminal domain AMICO_RS05125 PF08459 UvrC Helix-hairpin-helix N-terminal AMICO_RS05125 PF01541 GIY-YIG catalytic domain AMICO_RS05125 PF02151 UvrB/uvrC motif AMICO_RS05130 PF01406 tRNA synthetases class I (C) catalytic domain AMICO_RS05130 PF09190 DALR domain AMICO_RS05140 PF01546 Peptidase family M20/M25/M40 AMICO_RS05150 PF03848 Tellurite resistance protein TehB AMICO_RS05160 PF02915 Rubrerythrin AMICO_RS05175 PF04225 Opacity-associated protein A LysM-like domain AMICO_RS05175 PF01551 Peptidase family M23 AMICO_RS05180 PF00591 Glycosyl transferase family, a/b domain AMICO_RS05180 PF02885 Glycosyl transferase family, helical bundle domain AMICO_RS05180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMICO_RS05185 PF01048 Phosphorylase superfamily AMICO_RS05190 PF00589 Phage integrase family AMICO_RS05190 PF02899 Phage integrase, N-terminal SAM-like domain AMICO_RS05195 PF00293 NUDIX domain AMICO_RS05210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMICO_RS05210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMICO_RS05225 PF00551 Formyl transferase AMICO_RS05225 PF02911 Formyl transferase, C-terminal domain AMICO_RS05230 PF01327 Polypeptide deformylase AMICO_RS05235 PF00575 S1 RNA binding domain AMICO_RS05240 PF02401 LytB protein AMICO_RS05250 PF01119 DNA mismatch repair protein, C-terminal domain AMICO_RS05250 PF08676 MutL C terminal dimerisation domain AMICO_RS05255 PF00488 MutS domain V AMICO_RS05255 PF05192 MutS domain III AMICO_RS05255 PF05190 MutS family domain IV AMICO_RS05255 PF05188 MutS domain II AMICO_RS05255 PF01624 MutS domain I AMICO_RS05260 PF03652 Holliday junction resolvase AMICO_RS05265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS05265 PF01411 tRNA synthetases class II (A) AMICO_RS05265 PF02272 DHHA1 domain AMICO_RS05270 PF01979 Amidohydrolase family AMICO_RS05275 PF05221 S-adenosyl-L-homocysteine hydrolase AMICO_RS05275 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMICO_RS05280 PF01008 Initiation factor 2 subunit family AMICO_RS05285 PF13742 OB-fold nucleic acid binding domain AMICO_RS05285 PF02601 Exonuclease VII, large subunit AMICO_RS05290 PF01029 NusB family AMICO_RS05300 PF03780 Asp23 family, cell envelope-related function AMICO_RS05310 PF08207 Elongation factor P (EF-P) KOW-like domain AMICO_RS05310 PF09285 Elongation factor P, C-terminal AMICO_RS05310 PF01132 Elongation factor P (EF-P) OB domain AMICO_RS05315 PF00155 Aminotransferase class I and II AMICO_RS05320 PF01371 Trp repressor protein AMICO_RS05330 PF13654 AAA domain AMICO_RS05330 PF05362 Lon protease (S16) C-terminal proteolytic domain AMICO_RS05340 PF00689 Cation transporting ATPase, C-terminus AMICO_RS05340 PF00690 Cation transporter/ATPase, N-terminus AMICO_RS05345 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMICO_RS05350 PF01300 Telomere recombination AMICO_RS05350 PF07503 HypF finger AMICO_RS05350 PF00708 Acylphosphatase AMICO_RS05350 PF17788 HypF Kae1-like domain AMICO_RS05355 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMICO_RS05360 PF00206 Lyase AMICO_RS05360 PF10397 Adenylosuccinate lyase C-terminus AMICO_RS05370 PF00448 SRP54-type protein, GTPase domain AMICO_RS05370 PF02881 SRP54-type protein, helical bundle domain AMICO_RS05375 PF04468 PSP1 C-terminal conserved region AMICO_RS05380 PF09115 DNA polymerase III, delta subunit, C terminal AMICO_RS05385 PF02223 Thymidylate kinase AMICO_RS05390 PF05580 SpoIVB peptidase S55 AMICO_RS05390 PF17820 PDZ domain AMICO_RS05395 PF03462 PCRF domain AMICO_RS05395 PF00472 RF-1 domain AMICO_RS05400 PF02769 AIR synthase related protein, C-terminal domain AMICO_RS05400 PF00586 AIR synthase related protein, N-terminal domain AMICO_RS05405 PF07690 Major Facilitator Superfamily AMICO_RS05415 PF00156 Phosphoribosyl transferase domain AMICO_RS05420 PF14622 Ribonuclease-III-like AMICO_RS05420 PF00035 Double-stranded RNA binding motif AMICO_RS05425 PF02801 Beta-ketoacyl synthase, C-terminal domain AMICO_RS05425 PF00109 Beta-ketoacyl synthase, N-terminal domain AMICO_RS05430 PF00550 Phosphopantetheine attachment site AMICO_RS05440 PF00698 Acyl transferase domain AMICO_RS05445 PF03060 Nitronate monooxygenase AMICO_RS05450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMICO_RS05450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMICO_RS05455 PF02504 Fatty acid synthesis protein AMICO_RS05465 PF01783 Ribosomal L32p protein family AMICO_RS05475 PF00871 Acetokinase family AMICO_RS05480 PF05636 HIGH Nucleotidyl Transferase AMICO_RS05485 PF01467 Cytidylyltransferase-like AMICO_RS05495 PF01980 tRNA-methyltransferase O AMICO_RS05500 PF02390 Putative methyltransferase AMICO_RS05505 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMICO_RS05505 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMICO_RS05505 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMICO_RS05505 PF10371 Domain of unknown function AMICO_RS05505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMICO_RS05515 PF00398 Ribosomal RNA adenine dimethylase AMICO_RS05520 PF00216 Bacterial DNA-binding protein AMICO_RS05525 PF01926 50S ribosome-binding GTPase AMICO_RS05525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMICO_RS05530 PF17764 3′ DNA-binding domain (3′BD) AMICO_RS05530 PF00271 Helicase conserved C-terminal domain AMICO_RS05530 PF04851 Type III restriction enzyme, res subunit AMICO_RS05530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMICO_RS05530 PF18074 Primosomal protein N C-terminal domain AMICO_RS05535 PF04127 DNA / pantothenate metabolism flavoprotein AMICO_RS05535 PF02441 Flavoprotein AMICO_RS05545 PF00625 Guanylate kinase AMICO_RS05550 PF04025 Domain of unknown function (DUF370) AMICO_RS05555 PF08340 Domain of unknown function (DUF1732) AMICO_RS05555 PF03755 YicC-like family, N-terminal region AMICO_RS05560 PF16360 GTP-binding GTPase Middle Region AMICO_RS05560 PF01926 50S ribosome-binding GTPase AMICO_RS05560 PF13167 GTP-binding GTPase N-terminal AMICO_RS05565 PF00501 AMP-binding enzyme AMICO_RS05565 PF01553 Acyltransferase AMICO_RS05565 PF13193 AMP-binding enzyme C-terminal domain AMICO_RS05570 PF02224 Cytidylate kinase AMICO_RS05575 PF00849 RNA pseudouridylate synthase AMICO_RS05575 PF01479 S4 domain AMICO_RS05580 PF04079 Segregation and condensation complex subunit ScpB AMICO_RS05585 PF02616 Segregation and condensation protein ScpA AMICO_RS05590 PF00579 tRNA synthetases class I (W and Y) AMICO_RS05595 PF01784 NIF3 (NGG1p interacting factor 3) AMICO_RS05735 PF00589 Phage integrase family AMICO_RS05765 PF01695 IstB-like ATP binding protein AMICO_RS05775 PF00692 dUTPase AMICO_RS05835 PF02463 RecF/RecN/SMC N terminal domain AMICO_RS05855 PF00589 Phage integrase family AMICO_RS05855 PF13356 Arm DNA-binding domain AMICO_RS05855 PF14659 Phage integrase, N-terminal SAM-like domain AMICO_RS05870 PF00156 Phosphoribosyl transferase domain AMICO_RS05870 PF09182 Bacterial purine repressor, N-terminal AMICO_RS05875 PF00288 GHMP kinases N terminal domain AMICO_RS05875 PF08544 GHMP kinases C terminal AMICO_RS05885 PF09107 Elongation factor SelB, winged helix AMICO_RS05885 PF00009 Elongation factor Tu GTP binding domain AMICO_RS05885 PF09105 Elongation factor SelB, winged helix AMICO_RS05885 PF09106 Elongation factor SelB, winged helix AMICO_RS05885 PF03144 Elongation factor Tu domain 2 AMICO_RS05890 PF03841 L-seryl-tRNA selenium transferase AMICO_RS05905 PF04055 Radical SAM superfamily AMICO_RS05910 PF14492 Elongation Factor G, domain II AMICO_RS05910 PF06421 GTP-binding protein LepA C-terminus AMICO_RS05910 PF03144 Elongation factor Tu domain 2 AMICO_RS05910 PF00679 Elongation factor G C-terminus AMICO_RS05910 PF00009 Elongation factor Tu GTP binding domain AMICO_RS05915 PF01259 SAICAR synthetase AMICO_RS05920 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMICO_RS05930 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMICO_RS05930 PF00586 AIR synthase related protein, N-terminal domain AMICO_RS05930 PF02769 AIR synthase related protein, C-terminal domain AMICO_RS05935 PF00156 Phosphoribosyl transferase domain AMICO_RS05940 PF02769 AIR synthase related protein, C-terminal domain AMICO_RS05940 PF00586 AIR synthase related protein, N-terminal domain AMICO_RS05945 PF00551 Formyl transferase AMICO_RS05950 PF02142 MGS-like domain AMICO_RS05950 PF01808 AICARFT/IMPCHase bienzyme AMICO_RS05955 PF02844 Phosphoribosylglycinamide synthetase, N domain AMICO_RS05955 PF02843 Phosphoribosylglycinamide synthetase, C domain AMICO_RS05955 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMICO_RS05960 PF00731 AIR carboxylase AMICO_RS05970 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMICO_RS05975 PF00764 Arginosuccinate synthase AMICO_RS05980 PF01975 Survival protein SurE AMICO_RS05985 PF02163 Peptidase family M50 AMICO_RS05990 PF01368 DHH family AMICO_RS05990 PF02272 DHHA1 domain AMICO_RS05990 PF01743 Poly A polymerase head domain AMICO_RS05990 PF00571 CBS domain AMICO_RS05990 PF12627 Probable RNA and SrmB- binding site of polymerase A AMICO_RS06000 PF13361 UvrD-like helicase C-terminal domain AMICO_RS06000 PF00580 UvrD/REP helicase N-terminal domain AMICO_RS06005 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMICO_RS06010 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AMICO_RS06015 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMICO_RS06015 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMICO_RS06020 PF00155 Aminotransferase class I and II AMICO_RS06025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMICO_RS06025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMICO_RS06030 PF00860 Permease family AMICO_RS06035 PF01765 Ribosome recycling factor AMICO_RS06040 PF00696 Amino acid kinase family AMICO_RS06045 PF00889 Elongation factor TS AMICO_RS06050 PF00318 Ribosomal protein S2 AMICO_RS06055 PF02583 Metal-sensitive transcriptional repressor AMICO_RS06065 PF01161 Phosphatidylethanolamine-binding protein AMICO_RS06075 PF07687 Peptidase dimerisation domain AMICO_RS06075 PF01546 Peptidase family M20/M25/M40 AMICO_RS06080 PF00571 CBS domain AMICO_RS06080 PF03448 MgtE intracellular N domain AMICO_RS06080 PF01769 Divalent cation transporter AMICO_RS06105 PF00437 Type II/IV secretion system protein AMICO_RS06110 PF01339 CheB methylesterase AMICO_RS06110 PF00072 Response regulator receiver domain AMICO_RS06115 PF00263 Bacterial type II and III secretion system protein AMICO_RS06115 PF03958 Bacterial type II/III secretion system short domain AMICO_RS06135 PF01478 Type IV leader peptidase family AMICO_RS06150 PF00196 Bacterial regulatory proteins, luxR family AMICO_RS06150 PF00072 Response regulator receiver domain AMICO_RS06155 PF13185 GAF domain AMICO_RS06155 PF07730 Histidine kinase AMICO_RS06160 PF02803 Thiolase, C-terminal domain AMICO_RS06160 PF00108 Thiolase, N-terminal domain AMICO_RS06165 PF01144 Coenzyme A transferase AMICO_RS06170 PF01144 Coenzyme A transferase AMICO_RS06185 PF00202 Aminotransferase class-III AMICO_RS06195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMICO_RS06205 PF00873 AcrB/AcrD/AcrF family AMICO_RS06245 PF02652 L-lactate permease AMICO_RS06250 PF00155 Aminotransferase class I and II AMICO_RS06265 PF02915 Rubrerythrin AMICO_RS06270 PF14437 MafB19-like deaminase AMICO_RS06290 PF02374 Anion-transporting ATPase AMICO_RS06290 PF17886 HSP20-like domain found in ArsA AMICO_RS06300 PF01361 Tautomerase enzyme AMICO_RS06305 PF18113 Rubredoxin binding C-terminal domain AMICO_RS06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS06310 PF02127 Aminopeptidase I zinc metalloprotease (M18) AMICO_RS06315 PF05161 MOFRL family AMICO_RS06315 PF13660 Domain of unknown function (DUF4147) AMICO_RS06330 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMICO_RS06330 PF02358 Trehalose-phosphatase AMICO_RS06330 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMICO_RS06330 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMICO_RS06335 PF03636 Glycosyl hydrolase family 65, N-terminal domain AMICO_RS06335 PF03633 Glycosyl hydrolase family 65, C-terminal domain AMICO_RS06335 PF03632 Glycosyl hydrolase family 65 central catalytic domain AMICO_RS06335 PF02358 Trehalose-phosphatase AMICO_RS06355 PF02421 Ferrous iron transport protein B AMICO_RS06355 PF17910 FeoB cytosolic helical domain AMICO_RS06355 PF07664 Ferrous iron transport protein B C terminus AMICO_RS06355 PF07670 Nucleoside recognition AMICO_RS06360 PF00857 Isochorismatase family AMICO_RS06365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMICO_RS06365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMICO_RS06370 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMICO_RS06375 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMICO_RS06395 PF01177 Asp/Glu/Hydantoin racemase AMICO_RS06405 PF00293 NUDIX domain AMICO_RS06420 PF01367 5'-3' exonuclease, C-terminal SAM fold AMICO_RS06420 PF00476 DNA polymerase family A AMICO_RS06420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMICO_RS06425 PF00571 CBS domain AMICO_RS06425 PF02833 DHHA2 domain AMICO_RS06425 PF07085 DRTGG domain AMICO_RS06425 PF01368 DHH family AMICO_RS06430 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMICO_RS06435 PF12838 4Fe-4S dicluster domain AMICO_RS06440 PF00146 NADH dehydrogenase AMICO_RS06445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMICO_RS06445 PF00374 Nickel-dependent hydrogenase AMICO_RS06445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMICO_RS06450 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMICO_RS06450 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMICO_RS06455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMICO_RS06465 PF00361 Proton-conducting membrane transporter AMICO_RS06470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMICO_RS06480 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMICO_RS06480 PF00361 Proton-conducting membrane transporter AMICO_RS06480 PF13244 Domain of unknown function (DUF4040) AMICO_RS06480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMICO_RS06490 PF03334 Na+/H+ antiporter subunit AMICO_RS06495 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMICO_RS06500 PF01899 Na+/H+ ion antiporter subunit AMICO_RS06515 PF08497 Radical SAM N-terminal AMICO_RS06515 PF04055 Radical SAM superfamily AMICO_RS06515 PF11842 Domain of unknown function (DUF3362) AMICO_RS06525 PF02146 Sir2 family AMICO_RS06530 PF01544 CorA-like Mg2+ transporter protein AMICO_RS06560 PF02254 TrkA-N domain AMICO_RS06560 PF02080 TrkA-C domain AMICO_RS06565 PF02386 Cation transport protein AMICO_RS06570 PF03471 Transporter associated domain AMICO_RS06570 PF00999 Sodium/hydrogen exchanger family AMICO_RS06580 PF00571 CBS domain AMICO_RS06580 PF03471 Transporter associated domain AMICO_RS06580 PF01595 Cyclin M transmembrane N-terminal domain AMICO_RS06595 PF04172 LrgB-like family AMICO_RS06600 PF03788 LrgA family AMICO_RS06605 PF01042 Endoribonuclease L-PSP AMICO_RS06610 PF01970 Tripartite tricarboxylate transporter TctA family AMICO_RS06625 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMICO_RS06630 PF18324 Hypothetical protein TT1725 AMICO_RS06630 PF00180 Isocitrate/isopropylmalate dehydrogenase AMICO_RS06635 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS06635 PF07729 FCD domain AMICO_RS06640 PF00465 Iron-containing alcohol dehydrogenase AMICO_RS06645 PF09861 Lactate racemase N-terminal domain AMICO_RS06650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS06650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS06655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS06660 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS06665 PF00682 HMGL-like AMICO_RS06670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMICO_RS06670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMICO_RS06670 PF01842 ACT domain AMICO_RS06675 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS06675 PF07729 FCD domain AMICO_RS06690 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMICO_RS06700 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMICO_RS06700 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMICO_RS06705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMICO_RS06720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS06730 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS06740 PF02515 CoA-transferase family III AMICO_RS06745 PF00682 HMGL-like AMICO_RS06750 PF02615 Malate/L-lactate dehydrogenase AMICO_RS06775 PF12704 MacB-like periplasmic core domain AMICO_RS06775 PF02687 FtsX-like permease family AMICO_RS06775 PF00005 ABC transporter AMICO_RS06790 PF00258 Flavodoxin AMICO_RS06790 PF00753 Metallo-beta-lactamase superfamily AMICO_RS06795 PF04343 Protein of unknown function, DUF488 AMICO_RS06800 PF01381 Helix-turn-helix AMICO_RS06820 PF00271 Helicase conserved C-terminal domain AMICO_RS06820 PF00176 SNF2 family N-terminal domain AMICO_RS06825 PF07690 Major Facilitator Superfamily AMICO_RS06830 PF01427 D-ala-D-ala dipeptidase AMICO_RS06835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS06845 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS06865 PF00440 Bacterial regulatory proteins, tetR family AMICO_RS06880 PF00005 ABC transporter AMICO_RS06885 PF01668 SmpB protein AMICO_RS06900 PF00857 Isochorismatase family AMICO_RS06905 PF00390 Malic enzyme, N-terminal domain AMICO_RS06905 PF03949 Malic enzyme, NAD binding domain AMICO_RS06910 PF08240 Alcohol dehydrogenase GroES-like domain AMICO_RS06910 PF00107 Zinc-binding dehydrogenase AMICO_RS06925 PF08645 Polynucleotide kinase 3 phosphatase AMICO_RS06935 PF16363 GDP-mannose 4,6 dehydratase AMICO_RS06940 PF00483 Nucleotidyl transferase AMICO_RS06945 PF13580 SIS domain AMICO_RS06950 PF00072 Response regulator receiver domain AMICO_RS06950 PF00196 Bacterial regulatory proteins, luxR family AMICO_RS06955 PF01171 PP-loop family AMICO_RS06960 PF01458 Uncharacterized protein family (UPF0051) AMICO_RS06965 PF00005 ABC transporter AMICO_RS06970 PF00342 Phosphoglucose isomerase AMICO_RS06975 PF00462 Glutaredoxin AMICO_RS06980 PF00175 Oxidoreductase NAD-binding domain AMICO_RS06980 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AMICO_RS06980 PF00970 Oxidoreductase FAD-binding domain AMICO_RS06985 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS06985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMICO_RS06995 PF14492 Elongation Factor G, domain II AMICO_RS06995 PF03764 Elongation factor G, domain IV AMICO_RS06995 PF00679 Elongation factor G C-terminus AMICO_RS06995 PF03144 Elongation factor Tu domain 2 AMICO_RS06995 PF00009 Elongation factor Tu GTP binding domain AMICO_RS07000 PF02934 GatB/GatE catalytic domain AMICO_RS07000 PF02637 GatB domain AMICO_RS07005 PF01425 Amidase AMICO_RS07010 PF02686 Glu-tRNAGln amidotransferase C subunit AMICO_RS07015 PF01653 NAD-dependent DNA ligase adenylation domain AMICO_RS07015 PF12826 Helix-hairpin-helix motif AMICO_RS07015 PF03120 NAD-dependent DNA ligase OB-fold domain AMICO_RS07015 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMICO_RS07015 PF00533 BRCA1 C Terminus (BRCT) domain AMICO_RS07020 PF01336 OB-fold nucleic acid binding domain AMICO_RS07020 PF00152 tRNA synthetases class II (D, K and N) AMICO_RS07025 PF01207 Dihydrouridine synthase (Dus) AMICO_RS07030 PF03309 Type III pantothenate kinase AMICO_RS07035 PF00753 Metallo-beta-lactamase superfamily AMICO_RS07035 PF13567 Domain of unknown function (DUF4131) AMICO_RS07035 PF03772 Competence protein AMICO_RS07045 PF04055 Radical SAM superfamily AMICO_RS07045 PF01938 TRAM domain AMICO_RS07045 PF00919 Uncharacterized protein family UPF0004 AMICO_RS07055 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMICO_RS07055 PF01464 Transglycosylase SLT domain AMICO_RS07060 PF00301 Rubredoxin AMICO_RS07065 PF00557 Metallopeptidase family M24 AMICO_RS07065 PF01321 Creatinase/Prolidase N-terminal domain AMICO_RS07070 PF00586 AIR synthase related protein, N-terminal domain AMICO_RS07070 PF02769 AIR synthase related protein, C-terminal domain AMICO_RS07075 PF02677 Epoxyqueuosine reductase QueH AMICO_RS07080 PF02779 Transketolase, pyrimidine binding domain AMICO_RS07080 PF02780 Transketolase, C-terminal domain AMICO_RS07080 PF00456 Transketolase, thiamine diphosphate binding domain AMICO_RS07085 PF00842 Alanine racemase, C-terminal domain AMICO_RS07085 PF01168 Alanine racemase, N-terminal domain AMICO_RS07090 PF01235 Sodium:alanine symporter family AMICO_RS07095 PF02504 Fatty acid synthesis protein AMICO_RS07100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMICO_RS07105 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) AMICO_RS07110 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) AMICO_RS07115 PF04723 Glycine reductase complex selenoprotein A AMICO_RS07120 PF04723 Glycine reductase complex selenoprotein A AMICO_RS07125 PF09338 Glycine/sarcosine/betaine reductase component B subunits AMICO_RS07130 PF00085 Thioredoxin AMICO_RS07140 PF00209 Sodium:neurotransmitter symporter family AMICO_RS07145 PF01455 HupF/HypC family AMICO_RS07150 PF01924 Hydrogenase formation hypA family AMICO_RS07155 PF00586 AIR synthase related protein, N-terminal domain AMICO_RS07155 PF02769 AIR synthase related protein, C-terminal domain AMICO_RS07160 PF13277 YmdB-like protein AMICO_RS07165 PF01966 HD domain AMICO_RS07165 PF12072 Domain of unknown function (DUF3552) AMICO_RS07165 PF00013 KH domain AMICO_RS07170 PF02631 RecX family AMICO_RS07175 PF00271 Helicase conserved C-terminal domain AMICO_RS07175 PF00270 DEAD/DEAH box helicase AMICO_RS07175 PF17191 RecG wedge domain AMICO_RS07180 PF05103 DivIVA protein AMICO_RS07185 PF04472 Cell division protein SepF AMICO_RS07190 PF01168 Alanine racemase, N-terminal domain AMICO_RS07200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMICO_RS07200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMICO_RS07205 PF02649 Type I GTP cyclohydrolase folE2 AMICO_RS07210 PF01242 6-pyruvoyl tetrahydropterin synthase AMICO_RS07215 PF00120 Glutamine synthetase, catalytic domain AMICO_RS07215 PF18318 Glutamine synthetase C-terminal domain AMICO_RS07215 PF12437 Glutamine synthetase type III N terminal AMICO_RS07225 PF00772 DnaB-like helicase N terminal domain AMICO_RS07225 PF03796 DnaB-like helicase C terminal domain AMICO_RS07230 PF03948 Ribosomal protein L9, C-terminal domain AMICO_RS07230 PF01281 Ribosomal protein L9, N-terminal domain AMICO_RS07240 PF01084 Ribosomal protein S18 AMICO_RS07245 PF00436 Single-strand binding protein family AMICO_RS07250 PF01250 Ribosomal protein S6 AMICO_RS07260 PF03485 Arginyl tRNA synthetase N terminal domain AMICO_RS07260 PF05746 DALR anticodon binding domain AMICO_RS07260 PF00750 tRNA synthetases class I (R) AMICO_RS07270 PF07517 SecA DEAD-like domain AMICO_RS07270 PF01043 SecA preprotein cross-linking domain AMICO_RS07270 PF02810 SEC-C motif AMICO_RS07270 PF07516 SecA Wing and Scaffold domain AMICO_RS07275 PF01546 Peptidase family M20/M25/M40 AMICO_RS07275 PF07687 Peptidase dimerisation domain AMICO_RS07280 PF01066 CDP-alcohol phosphatidyltransferase AMICO_RS07285 PF00005 ABC transporter AMICO_RS07290 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMICO_RS07290 PF00005 ABC transporter AMICO_RS07295 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS07295 PF11862 Domain of unknown function (DUF3382) AMICO_RS07300 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS07310 PF03477 ATP cone domain AMICO_RS07320 PF01165 Ribosomal protein S21 AMICO_RS07325 PF01230 HIT domain AMICO_RS07330 PF00919 Uncharacterized protein family UPF0004 AMICO_RS07330 PF04055 Radical SAM superfamily AMICO_RS07330 PF01938 TRAM domain AMICO_RS07340 PF00684 DnaJ central domain AMICO_RS07340 PF01556 DnaJ C terminal domain AMICO_RS07340 PF00226 DnaJ domain AMICO_RS07345 PF00012 Hsp70 protein AMICO_RS07350 PF01025 GrpE AMICO_RS07355 PF01628 HrcA protein C terminal domain AMICO_RS07365 PF00809 Pterin binding enzyme AMICO_RS07370 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMICO_RS07380 PF00578 AhpC/TSA family AMICO_RS07385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMICO_RS07400 PF13722 5TM C-terminal transporter carbon starvation CstA AMICO_RS07400 PF02554 Carbon starvation protein CstA AMICO_RS07415 PF00709 Adenylosuccinate synthetase AMICO_RS07420 PF04748 Divergent polysaccharide deacetylase AMICO_RS07425 PF03572 Peptidase family S41 AMICO_RS07425 PF13180 PDZ domain AMICO_RS07430 PF01551 Peptidase family M23 AMICO_RS07430 PF04225 Opacity-associated protein A LysM-like domain AMICO_RS07435 PF02687 FtsX-like permease family AMICO_RS07435 PF18075 FtsX extracellular domain AMICO_RS07440 PF00005 ABC transporter AMICO_RS07445 PF02780 Transketolase, C-terminal domain AMICO_RS07445 PF02779 Transketolase, pyrimidine binding domain AMICO_RS07450 PF00456 Transketolase, thiamine diphosphate binding domain AMICO_RS07465 PF02545 Maf-like protein AMICO_RS07475 PF02673 Bacitracin resistance protein BacA AMICO_RS07480 PF00753 Metallo-beta-lactamase superfamily AMICO_RS07480 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMICO_RS07480 PF17770 Ribonuclease J C-terminal domain AMICO_RS07485 PF03449 Transcription elongation factor, N-terminal AMICO_RS07485 PF01272 Transcription elongation factor, GreA/GreB, C-term AMICO_RS07490 PF07478 D-ala D-ala ligase C-terminus AMICO_RS07490 PF01820 D-ala D-ala ligase N-terminus AMICO_RS07515 PF06418 CTP synthase N-terminus AMICO_RS07515 PF00117 Glutamine amidotransferase class-I AMICO_RS07520 PF01551 Peptidase family M23 AMICO_RS07525 PF07497 Rho termination factor, RNA-binding domain AMICO_RS07525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMICO_RS07525 PF07498 Rho termination factor, N-terminal domain AMICO_RS07530 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMICO_RS07550 PF00365 Phosphofructokinase AMICO_RS07565 PF00395 S-layer homology domain AMICO_RS07575 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMICO_RS07580 PF00534 Glycosyl transferases group 1 AMICO_RS07580 PF13439 Glycosyltransferase Family 4 AMICO_RS07585 PF00534 Glycosyl transferases group 1 AMICO_RS07585 PF13439 Glycosyltransferase Family 4 AMICO_RS07595 PF02348 Cytidylyltransferase AMICO_RS07605 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMICO_RS07610 PF00571 CBS domain AMICO_RS07610 PF01380 SIS domain AMICO_RS07615 PF00793 DAHP synthetase I family AMICO_RS07620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMICO_RS07625 PF00005 ABC transporter AMICO_RS07625 PF00664 ABC transporter transmembrane region AMICO_RS07635 PF02684 Lipid-A-disaccharide synthetase AMICO_RS07640 PF17930 LpxI N-terminal domain AMICO_RS07640 PF06230 LpxI C-terminal domain AMICO_RS07655 PF00132 Bacterial transferase hexapeptide (six repeats) AMICO_RS07655 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMICO_RS07660 PF07977 FabA-like domain AMICO_RS07665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMICO_RS07670 PF14602 Hexapeptide repeat of succinyl-transferase AMICO_RS07670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMICO_RS07670 PF00132 Bacterial transferase hexapeptide (six repeats) AMICO_RS07690 PF00140 Sigma-70 factor, region 1.2 AMICO_RS07690 PF04542 Sigma-70 region 2 AMICO_RS07690 PF04539 Sigma-70 region 3 AMICO_RS07690 PF04545 Sigma-70, region 4 AMICO_RS07695 PF00300 Histidine phosphatase superfamily (branch 1) AMICO_RS07700 PF00144 Beta-lactamase AMICO_RS07720 PF14698 Argininosuccinate lyase C-terminal AMICO_RS07720 PF00206 Lyase AMICO_RS07730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMICO_RS07730 PF03725 3' exoribonuclease family, domain 2 AMICO_RS07730 PF01138 3' exoribonuclease family, domain 1 AMICO_RS07730 PF00575 S1 RNA binding domain AMICO_RS07730 PF00013 KH domain AMICO_RS07735 PF00072 Response regulator receiver domain AMICO_RS07740 PF08222 CodY helix-turn-helix domain AMICO_RS07740 PF06018 CodY GAF-like domain AMICO_RS07745 PF10431 C-terminal, D2-small domain, of ClpB protein AMICO_RS07745 PF00004 ATPase family associated with various cellular activities (AAA) AMICO_RS07745 PF07724 AAA domain (Cdc48 subfamily) AMICO_RS07750 PF00227 Proteasome subunit AMICO_RS07755 PF02899 Phage integrase, N-terminal SAM-like domain AMICO_RS07755 PF00589 Phage integrase family AMICO_RS07760 PF01134 Glucose inhibited division protein A AMICO_RS07765 PF01131 DNA topoisomerase AMICO_RS07765 PF01396 Topoisomerase DNA binding C4 zinc finger AMICO_RS07765 PF01751 Toprim domain AMICO_RS07780 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMICO_RS07780 PF01078 Magnesium chelatase, subunit ChlI AMICO_RS07785 PF02021 Uncharacterised protein family UPF0102 AMICO_RS07790 PF01351 Ribonuclease HII AMICO_RS07795 PF01926 50S ribosome-binding GTPase AMICO_RS07800 PF10502 Signal peptidase, peptidase S26 AMICO_RS07820 PF03061 Thioesterase superfamily AMICO_RS07835 PF00571 CBS domain AMICO_RS07835 PF01769 Divalent cation transporter AMICO_RS07835 PF03448 MgtE intracellular N domain AMICO_RS07840 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMICO_RS07845 PF10502 Signal peptidase, peptidase S26 AMICO_RS07850 PF01268 Formate--tetrahydrofolate ligase AMICO_RS07855 PF04961 Formiminotransferase-cyclodeaminase AMICO_RS07860 PF02971 Formiminotransferase domain AMICO_RS07860 PF07837 Formiminotransferase domain, N-terminal subdomain AMICO_RS07865 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS07870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS07875 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS07880 PF07687 Peptidase dimerisation domain AMICO_RS07880 PF01546 Peptidase family M20/M25/M40 AMICO_RS07890 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMICO_RS07890 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMICO_RS07895 PF01268 Formate--tetrahydrofolate ligase AMICO_RS07900 PF01139 tRNA-splicing ligase RtcB AMICO_RS07910 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMICO_RS07915 PF04015 Domain of unknown function (DUF362) AMICO_RS07930 PF00374 Nickel-dependent hydrogenase AMICO_RS07935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMICO_RS07940 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMICO_RS07940 PF00037 4Fe-4S binding domain AMICO_RS07940 PF01568 Molydopterin dinucleotide binding domain AMICO_RS07940 PF00384 Molybdopterin oxidoreductase AMICO_RS07940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMICO_RS07945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMICO_RS07945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMICO_RS07945 PF00037 4Fe-4S binding domain AMICO_RS07960 PF12857 TOBE-like domain AMICO_RS07960 PF00005 ABC transporter AMICO_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS07970 PF12849 PBP superfamily domain AMICO_RS07980 PF01293 Phosphoenolpyruvate carboxykinase AMICO_RS07990 PF04055 Radical SAM superfamily AMICO_RS08000 PF00005 ABC transporter AMICO_RS08005 PF02653 Branched-chain amino acid transport system / permease component AMICO_RS08015 PF02608 ABC transporter substrate-binding protein PnrA-like AMICO_RS08020 PF00149 Calcineurin-like phosphoesterase AMICO_RS08020 PF02872 5'-nucleotidase, C-terminal domain AMICO_RS08025 PF03167 Uracil DNA glycosylase superfamily AMICO_RS08035 PF10437 Bacterial lipoate protein ligase C-terminus AMICO_RS08035 PF03099 Biotin/lipoate A/B protein ligase family AMICO_RS08040 PF08402 TOBE domain AMICO_RS08040 PF00005 ABC transporter AMICO_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS08055 PF03099 Biotin/lipoate A/B protein ligase family AMICO_RS08055 PF10437 Bacterial lipoate protein ligase C-terminus AMICO_RS08060 PF01571 Aminomethyltransferase folate-binding domain AMICO_RS08060 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMICO_RS08065 PF01597 Glycine cleavage H-protein AMICO_RS08070 PF02347 Glycine cleavage system P-protein AMICO_RS08075 PF02347 Glycine cleavage system P-protein AMICO_RS08080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS08080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMICO_RS08085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMICO_RS08085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS08090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMICO_RS08090 PF00364 Biotin-requiring enzyme AMICO_RS08090 PF02817 e3 binding domain AMICO_RS08095 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS08095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS08105 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS08115 PF02780 Transketolase, C-terminal domain AMICO_RS08115 PF02779 Transketolase, pyrimidine binding domain AMICO_RS08120 PF00676 Dehydrogenase E1 component AMICO_RS08125 PF07729 FCD domain AMICO_RS08125 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS08130 PF01661 Macro domain AMICO_RS08145 PF00156 Phosphoribosyl transferase domain AMICO_RS08150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMICO_RS08155 PF01180 Dihydroorotate dehydrogenase AMICO_RS08160 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AMICO_RS08165 PF01979 Amidohydrolase family AMICO_RS08170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMICO_RS08170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMICO_RS08175 PF00156 Phosphoribosyl transferase domain AMICO_RS08180 PF00155 Aminotransferase class I and II AMICO_RS08185 PF02548 Ketopantoate hydroxymethyltransferase AMICO_RS08190 PF01614 Bacterial transcriptional regulator AMICO_RS08190 PF09339 IclR helix-turn-helix domain AMICO_RS08205 PF00892 EamA-like transporter family AMICO_RS08210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMICO_RS08210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMICO_RS08220 PF13193 AMP-binding enzyme C-terminal domain AMICO_RS08220 PF00501 AMP-binding enzyme AMICO_RS08235 PF00731 AIR carboxylase AMICO_RS08245 PF01546 Peptidase family M20/M25/M40 AMICO_RS08245 PF07687 Peptidase dimerisation domain AMICO_RS08250 PF00085 Thioredoxin AMICO_RS08260 PF00578 AhpC/TSA family AMICO_RS08260 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMICO_RS08265 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMICO_RS08265 PF00578 AhpC/TSA family AMICO_RS08270 PF14492 Elongation Factor G, domain II AMICO_RS08270 PF00679 Elongation factor G C-terminus AMICO_RS08270 PF00009 Elongation factor Tu GTP binding domain AMICO_RS08270 PF03144 Elongation factor Tu domain 2 AMICO_RS08275 PF00990 Diguanylate cyclase, GGDEF domain AMICO_RS08280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMICO_RS08280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMICO_RS08305 PF04545 Sigma-70, region 4 AMICO_RS08305 PF04539 Sigma-70 region 3 AMICO_RS08305 PF04542 Sigma-70 region 2 AMICO_RS08305 PF00140 Sigma-70 factor, region 1.2 AMICO_RS08305 PF03979 Sigma-70 factor, region 1.1 AMICO_RS08310 PF03577 Peptidase family C69 AMICO_RS08335 PF03577 Peptidase family C69 AMICO_RS08345 PF01554 MatE AMICO_RS08355 PF03190 Protein of unknown function, DUF255 AMICO_RS08365 PF03591 AzlC protein AMICO_RS08370 PF13419 Haloacid dehalogenase-like hydrolase AMICO_RS08375 PF03447 Homoserine dehydrogenase, NAD binding domain AMICO_RS08375 PF00742 Homoserine dehydrogenase AMICO_RS08375 PF01842 ACT domain AMICO_RS08385 PF00580 UvrD/REP helicase N-terminal domain AMICO_RS08385 PF13361 UvrD-like helicase C-terminal domain AMICO_RS08385 PF12705 PD-(D/E)XK nuclease superfamily AMICO_RS08390 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMICO_RS08390 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AMICO_RS08400 PF00204 DNA gyrase B AMICO_RS08400 PF01751 Toprim domain AMICO_RS08400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS08400 PF00986 DNA gyrase B subunit, carboxyl terminus AMICO_RS08410 PF00883 Cytosol aminopeptidase family, catalytic domain AMICO_RS08410 PF02789 Cytosol aminopeptidase family, N-terminal domain AMICO_RS08415 PF03576 Peptidase family S58 AMICO_RS08425 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS08425 PF07729 FCD domain AMICO_RS08435 PF07687 Peptidase dimerisation domain AMICO_RS08435 PF01546 Peptidase family M20/M25/M40 AMICO_RS08440 PF00557 Metallopeptidase family M24 AMICO_RS08440 PF01321 Creatinase/Prolidase N-terminal domain AMICO_RS08445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMICO_RS08455 PF00005 ABC transporter AMICO_RS08455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS08460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS08460 PF00005 ABC transporter AMICO_RS08465 PF12911 N-terminal TM domain of oligopeptide transport permease C AMICO_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS08470 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS08475 PF13735 tRNA nucleotidyltransferase domain 2 putative AMICO_RS08475 PF01743 Poly A polymerase head domain AMICO_RS08475 PF12627 Probable RNA and SrmB- binding site of polymerase A AMICO_RS08480 PF02615 Malate/L-lactate dehydrogenase AMICO_RS08485 PF09861 Lactate racemase N-terminal domain AMICO_RS08490 PF01081 KDPG and KHG aldolase AMICO_RS08495 PF09383 NIL domain AMICO_RS08495 PF00005 ABC transporter AMICO_RS08500 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS08505 PF03180 NLPA lipoprotein AMICO_RS08510 PF13378 Enolase C-terminal domain-like AMICO_RS08510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMICO_RS08515 PF00294 pfkB family carbohydrate kinase AMICO_RS08525 PF09339 IclR helix-turn-helix domain AMICO_RS08525 PF01614 Bacterial transcriptional regulator AMICO_RS08530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08540 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS08545 PF08666 SAF domain AMICO_RS08545 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMICO_RS08550 PF12849 PBP superfamily domain AMICO_RS08555 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS08560 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS08565 PF00005 ABC transporter AMICO_RS08575 PF00072 Response regulator receiver domain AMICO_RS08575 PF00486 Transcriptional regulatory protein, C terminal AMICO_RS08580 PF13426 PAS domain AMICO_RS08580 PF00512 His Kinase A (phospho-acceptor) domain AMICO_RS08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS08580 PF00672 HAMP domain AMICO_RS08595 PF00149 Calcineurin-like phosphoesterase AMICO_RS08600 PF09339 IclR helix-turn-helix domain AMICO_RS08600 PF01614 Bacterial transcriptional regulator AMICO_RS08610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08610 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS08615 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS08620 PF00202 Aminotransferase class-III AMICO_RS08630 PF00291 Pyridoxal-phosphate dependent enzyme AMICO_RS08650 PF00245 Alkaline phosphatase AMICO_RS08665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08675 PF00694 Aconitase C-terminal domain AMICO_RS08680 PF00330 Aconitase family (aconitate hydratase) AMICO_RS08730 PF01370 NAD dependent epimerase/dehydratase family AMICO_RS08735 PF02719 Polysaccharide biosynthesis protein AMICO_RS08740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMICO_RS08745 PF02397 Bacterial sugar transferase AMICO_RS08760 PF02350 UDP-N-acetylglucosamine 2-epimerase AMICO_RS08775 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMICO_RS08775 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMICO_RS08790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMICO_RS08790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMICO_RS08790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMICO_RS08810 PF16363 GDP-mannose 4,6 dehydratase AMICO_RS08820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMICO_RS08825 PF00483 Nucleotidyl transferase AMICO_RS08900 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS08900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08905 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS08910 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS08915 PF00155 Aminotransferase class I and II AMICO_RS08920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMICO_RS08920 PF01842 ACT domain AMICO_RS08920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMICO_RS08925 PF07969 Amidohydrolase family AMICO_RS08935 PF02347 Glycine cleavage system P-protein AMICO_RS08940 PF02347 Glycine cleavage system P-protein AMICO_RS08945 PF01979 Amidohydrolase family AMICO_RS08945 PF00449 Urease alpha-subunit, N-terminal domain AMICO_RS08950 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS08965 PF06865 Pyrimidine/purine nucleoside phosphorylase AMICO_RS08970 PF07729 FCD domain AMICO_RS08970 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS08975 PF01594 AI-2E family transporter AMICO_RS08980 PF03841 L-seryl-tRNA selenium transferase AMICO_RS08985 PF00291 Pyridoxal-phosphate dependent enzyme AMICO_RS08990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMICO_RS08990 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS08995 PF00701 Dihydrodipicolinate synthetase family AMICO_RS09010 PF16868 NMT1-like family AMICO_RS09020 PF13847 Methyltransferase domain AMICO_RS09025 PF00313 'Cold-shock' DNA-binding domain AMICO_RS09035 PF01741 Large-conductance mechanosensitive channel, MscL AMICO_RS09040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMICO_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS09050 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS09050 PF12911 N-terminal TM domain of oligopeptide transport permease C AMICO_RS09055 PF00005 ABC transporter AMICO_RS09055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS09060 PF00005 ABC transporter AMICO_RS09060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS09070 PF00300 Histidine phosphatase superfamily (branch 1) AMICO_RS09070 PF13456 Reverse transcriptase-like AMICO_RS09075 PF04321 RmlD substrate binding domain AMICO_RS09085 PF00464 Serine hydroxymethyltransferase AMICO_RS09090 PF00155 Aminotransferase class I and II AMICO_RS09095 PF01370 NAD dependent epimerase/dehydratase family AMICO_RS09110 PF03949 Malic enzyme, NAD binding domain AMICO_RS09110 PF00390 Malic enzyme, N-terminal domain AMICO_RS09115 PF13193 AMP-binding enzyme C-terminal domain AMICO_RS09115 PF00501 AMP-binding enzyme AMICO_RS09120 PF00958 GMP synthase C terminal domain AMICO_RS09120 PF00117 Glutamine amidotransferase class-I AMICO_RS09120 PF02540 NAD synthase AMICO_RS09125 PF01969 Protein of unknown function DUF111 AMICO_RS09130 PF01168 Alanine racemase, N-terminal domain AMICO_RS09130 PF14031 Putative serine dehydratase domain AMICO_RS09135 PF01546 Peptidase family M20/M25/M40 AMICO_RS09135 PF07687 Peptidase dimerisation domain AMICO_RS09155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMICO_RS09155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMICO_RS09160 PF01546 Peptidase family M20/M25/M40 AMICO_RS09165 PF00012 Hsp70 protein AMICO_RS09175 PF02558 Ketopantoate reductase PanE/ApbA AMICO_RS09175 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AMICO_RS09190 PF16868 NMT1-like family AMICO_RS09205 PF00149 Calcineurin-like phosphoesterase AMICO_RS09230 PF02829 3H domain AMICO_RS09230 PF08279 HTH domain AMICO_RS09240 PF00990 Diguanylate cyclase, GGDEF domain AMICO_RS09245 PF01554 MatE AMICO_RS09255 PF04349 Periplasmic glucan biosynthesis protein, MdoG AMICO_RS09265 PF00535 Glycosyl transferase family 2 AMICO_RS09270 PF09297 NADH pyrophosphatase zinc ribbon domain AMICO_RS09270 PF00293 NUDIX domain AMICO_RS09270 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMICO_RS09280 PF08534 Redoxin AMICO_RS09295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMICO_RS09300 PF01791 DeoC/LacD family aldolase AMICO_RS09305 PF07687 Peptidase dimerisation domain AMICO_RS09305 PF01546 Peptidase family M20/M25/M40 AMICO_RS09310 PF00701 Dihydrodipicolinate synthetase family AMICO_RS09315 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS09315 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS09320 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS09320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS09325 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS09330 PF01177 Asp/Glu/Hydantoin racemase AMICO_RS09335 PF01979 Amidohydrolase family AMICO_RS09340 PF01979 Amidohydrolase family AMICO_RS09345 PF09339 IclR helix-turn-helix domain AMICO_RS09345 PF01614 Bacterial transcriptional regulator AMICO_RS09350 PF00266 Aminotransferase class-V AMICO_RS09360 PF00871 Acetokinase family AMICO_RS09365 PF01515 Phosphate acetyl/butaryl transferase AMICO_RS09370 PF01515 Phosphate acetyl/butaryl transferase AMICO_RS09375 PF00871 Acetokinase family AMICO_RS09400 PF02632 BioY family AMICO_RS09405 PF01205 Uncharacterized protein family UPF0029 AMICO_RS09405 PF09186 Domain of unknown function (DUF1949) AMICO_RS09410 PF01230 HIT domain AMICO_RS09415 PF02195 ParB-like nuclease domain AMICO_RS09415 PF17762 HTH domain found in ParB protein AMICO_RS09420 PF13614 AAA domain AMICO_RS09425 PF02527 rRNA small subunit methyltransferase G AMICO_RS09430 PF00565 Staphylococcal nuclease homologue AMICO_RS09455 PF07687 Peptidase dimerisation domain AMICO_RS09455 PF01546 Peptidase family M20/M25/M40 AMICO_RS09460 PF01546 Peptidase family M20/M25/M40 AMICO_RS09460 PF07687 Peptidase dimerisation domain AMICO_RS09465 PF00950 ABC 3 transport family AMICO_RS09470 PF00005 ABC transporter AMICO_RS09475 PF01297 Zinc-uptake complex component A periplasmic AMICO_RS09510 PF00072 Response regulator receiver domain AMICO_RS09510 PF00196 Bacterial regulatory proteins, luxR family AMICO_RS09515 PF13492 GAF domain AMICO_RS09515 PF07730 Histidine kinase AMICO_RS09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMICO_RS09525 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AMICO_RS09525 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AMICO_RS09530 PF00392 Bacterial regulatory proteins, gntR family AMICO_RS09530 PF07729 FCD domain AMICO_RS09540 PF00795 Carbon-nitrogen hydrolase AMICO_RS09545 PF03480 Bacterial extracellular solute-binding protein, family 7 AMICO_RS09550 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS09555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMICO_RS09555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMICO_RS09560 PF00326 Prolyl oligopeptidase family AMICO_RS09570 PF00248 Aldo/keto reductase family AMICO_RS09575 PF01614 Bacterial transcriptional regulator AMICO_RS09575 PF09339 IclR helix-turn-helix domain AMICO_RS09580 PF01979 Amidohydrolase family AMICO_RS09585 PF01175 Urocanase Rossmann-like domain AMICO_RS09585 PF17392 Urocanase C-terminal domain AMICO_RS09585 PF17391 Urocanase N-terminal domain AMICO_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component AMICO_RS09600 PF08402 TOBE domain AMICO_RS09600 PF00005 ABC transporter AMICO_RS09605 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMICO_RS09610 PF03328 HpcH/HpaI aldolase/citrate lyase family AMICO_RS09635 PF00403 Heavy-metal-associated domain AMICO_RS09650 PF00072 Response regulator receiver domain AMICO_RS09650 PF00196 Bacterial regulatory proteins, luxR family AMICO_RS09655 PF00464 Serine hydroxymethyltransferase AMICO_RS09660 PF07687 Peptidase dimerisation domain AMICO_RS09660 PF01546 Peptidase family M20/M25/M40 AMICO_RS09665 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AMICO_RS09670 PF01546 Peptidase family M20/M25/M40 AMICO_RS09670 PF07687 Peptidase dimerisation domain AMICO_RS09680 PF00221 Aromatic amino acid lyase AMICO_RS09685 PF03063 Prismane/CO dehydrogenase family AMICO_RS09695 PF02082 Transcriptional regulator AMICO_RS09700 PF00266 Aminotransferase class-V AMICO_RS09745 PF01734 Patatin-like phospholipase AMICO_RS09750 PF00924 Mechanosensitive ion channel AMICO_RS09750 PF12795 Mechanosensitive ion channel porin domain AMICO_RS09750 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMICO_RS09755 PF01478 Type IV leader peptidase family AMICO_RS09755 PF06750 Bacterial Peptidase A24 N-terminal domain AMICO_RS09760 PF08361 MAATS-type transcriptional repressor, C-terminal region AMICO_RS09760 PF00440 Bacterial regulatory proteins, tetR family AMICO_RS09775 PF00356 Bacterial regulatory proteins, lacI family AMICO_RS09785 PF01569 PAP2 superfamily AMICO_RS09790 PF00005 ABC transporter AMICO_RS09790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS09795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMICO_RS09795 PF00005 ABC transporter AMICO_RS09815 PF17645 Arylmalonate decarboxylase AMICO_RS09820 PF00872 Transposase, Mutator family AMICO_RS09825 PF00872 Transposase, Mutator family AMICO_RS09830 PF01966 HD domain AMICO_RS09835 PF00072 Response regulator receiver domain AMICO_RS09835 PF01966 HD domain AMICO_RS09855 PF12169 DNA polymerase III subunits gamma and tau domain III AMICO_RS09860 PF07698 7TM receptor with intracellular HD hydrolase AMICO_RS09860 PF07697 7TM-HD extracellular AMICO_RS09860 PF01966 HD domain AMICO_RS09870 PF01171 PP-loop family AMICO_RS09870 PF11734 TilS substrate C-terminal domain AMICO_RS09875 PF00994 Probable molybdopterin binding domain AMICO_RS09880 PF09397 Ftsk gamma domain AMICO_RS09880 PF01580 FtsK/SpoIIIE family AMICO_RS09880 PF17854 FtsK alpha domain AMICO_RS09880 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMICO_RS09895 PF00589 Phage integrase family AMICO_RS09905 PF01726 LexA DNA binding domain AMICO_RS09905 PF00717 Peptidase S24-like AMICO_RS09915 PF13344 Haloacid dehalogenase-like hydrolase AMICO_RS09915 PF00293 NUDIX domain AMICO_RS09945 PF01381 Helix-turn-helix AMICO_RS09950 PF01121 Dephospho-CoA kinase AMICO_RS09960 PF05230 MASE2 domain AMICO_RS09960 PF00990 Diguanylate cyclase, GGDEF domain AMICO_RS09980 PF17782 DprA winged helix domain AMICO_RS09980 PF02481 DNA recombination-mediator protein A AMICO_RS09995 PF11871 Domain of unknown function (DUF3391) AMICO_RS09995 PF01966 HD domain AMICO_RS10010 PF17200 Single Cache domain 2 AMICO_RS10010 PF07730 Histidine kinase