AMICO_RS00005 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AMICO_RS00010 SM00480 DNA polymerase III beta subunit AMICO_RS00020 SM01228 AMICO_RS00020 AMICO_RS00045 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMICO_RS00050 SM01130 AMICO_RS00050 AMICO_RS00115 SM00481 DNA polymerase alpha chain like domain AMICO_RS00130 SM01133 AMICO_RS00130 AMICO_RS00150 SM00487 DEAD-like helicases superfamily AMICO_RS00150 SM00490 helicase superfamily c-terminal domain AMICO_RS00160 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00200 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00230 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00240 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS00270 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMICO_RS00310 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00340 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS00345 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00415 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS00470 SM01329 AMICO_RS00470 AMICO_RS00485 SM00917 LeuA allosteric (dimerisation) domain AMICO_RS00510 SM00900 AMICO_RS00510 AMICO_RS00605 SM00487 DEAD-like helicases superfamily AMICO_RS00605 SM00490 helicase superfamily c-terminal domain AMICO_RS00620 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS00620 SM00895 AMICO_RS00620 AMICO_RS00655 SM00919 Malic enzyme, NAD binding domain AMICO_RS00655 SM01274 AMICO_RS00655 AMICO_RS00710 SM00564 beta-propeller repeat AMICO_RS00760 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00765 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00805 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AMICO_RS00815 SM00271 DnaJ molecular chaperone homology domain AMICO_RS00825 SM01359 AMICO_RS00825 AMICO_RS00825 SM01360 AMICO_RS00825 AMICO_RS00830 SM00382 ATPases associated with a variety of cellular activities AMICO_RS00830 SM01086 C-terminal, D2-small domain, of ClpB protein AMICO_RS00840 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS00840 SM00387 Histidine kinase-like ATPases AMICO_RS00845 SM00448 cheY-homologous receiver domain AMICO_RS00935 SM00903 Flavin reductase like domain AMICO_RS01030 SM01005 Alanine racemase, C-terminal domain AMICO_RS01045 SM00899 AMICO_RS01045 AMICO_RS01050 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS01090 SM00448 cheY-homologous receiver domain AMICO_RS01100 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS01100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMICO_RS01145 SM00642 Alpha-amylase domain AMICO_RS01155 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMICO_RS01180 SM00382 ATPases associated with a variety of cellular activities AMICO_RS01225 SM00434 DNA Topoisomerase IV AMICO_RS01270 SM00382 ATPases associated with a variety of cellular activities AMICO_RS01360 SM00946 Prolyl-tRNA synthetase, C-terminal AMICO_RS01380 SM00450 Rhodanese Homology Domain AMICO_RS01425 SM00481 DNA polymerase alpha chain like domain AMICO_RS01440 SM00646 AMICO_RS01440 AMICO_RS01445 SM00909 Sporulation and spore germination AMICO_RS01480 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS01480 SM00924 MgtE intracellular N domain AMICO_RS01535 SM00421 helix_turn_helix, Lux Regulon AMICO_RS01570 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMICO_RS01570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMICO_RS01575 SM00649 Ribosomal protein L11/L12 AMICO_RS01660 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS01675 SM00478 endonuclease III AMICO_RS01675 SM00525 AMICO_RS01675 AMICO_RS01705 SM00382 ATPases associated with a variety of cellular activities AMICO_RS01740 SM00849 Metallo-beta-lactamase superfamily AMICO_RS01760 SM00382 ATPases associated with a variety of cellular activities AMICO_RS01770 SM00357 Cold shock protein domain AMICO_RS01775 SM00487 DEAD-like helicases superfamily AMICO_RS01775 SM00490 helicase superfamily c-terminal domain AMICO_RS01810 SM00382 ATPases associated with a variety of cellular activities AMICO_RS01855 SM00382 ATPases associated with a variety of cellular activities AMICO_RS01855 SM01072 Cell division protein 48 (CDC48) domain 2 AMICO_RS01855 SM01073 Cell division protein 48 (CDC48) N-terminal domain AMICO_RS01870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS01875 SM00363 S4 RNA-binding domain AMICO_RS01885 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMICO_RS01915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS01925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS01925 SM00895 AMICO_RS01925 AMICO_RS01950 SM00740 AMICO_RS01950 AMICO_RS01965 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS01975 SM00852 Probable molybdopterin binding domain AMICO_RS01985 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02040 SM00903 Flavin reductase like domain AMICO_RS02045 SM00849 Metallo-beta-lactamase superfamily AMICO_RS02060 SM00870 AMICO_RS02060 AMICO_RS02080 SM00421 helix_turn_helix, Lux Regulon AMICO_RS02080 SM00448 cheY-homologous receiver domain AMICO_RS02090 SM00849 Metallo-beta-lactamase superfamily AMICO_RS02090 SM01027 Beta-Casp domain AMICO_RS02100 SM00363 S4 RNA-binding domain AMICO_RS02120 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02125 SM00849 Metallo-beta-lactamase superfamily AMICO_RS02145 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS02145 SM00895 AMICO_RS02145 AMICO_RS02150 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02165 SM00849 Metallo-beta-lactamase superfamily AMICO_RS02195 SM00387 Histidine kinase-like ATPases AMICO_RS02210 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02215 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS02215 SM00895 AMICO_RS02215 AMICO_RS02225 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS02290 SM00487 DEAD-like helicases superfamily AMICO_RS02305 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS02305 SM00895 AMICO_RS02305 AMICO_RS02460 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02485 SM00357 Cold shock protein domain AMICO_RS02495 SM00796 Allophanate hydrolase subunit 1 AMICO_RS02500 SM00797 Allophanate hydrolase subunit 2 AMICO_RS02515 SM01007 Class II Aldolase and Adducin N-terminal domain AMICO_RS02565 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS02565 SM00895 AMICO_RS02565 AMICO_RS02590 SM00881 CoA binding domain AMICO_RS02670 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS02670 SM00732 Likely ribonuclease with RNase H fold. AMICO_RS02695 SM00849 Metallo-beta-lactamase superfamily AMICO_RS02705 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS02710 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS02735 SM00870 AMICO_RS02735 AMICO_RS02750 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02750 SM00962 SRP54-type protein, GTPase domain AMICO_RS02750 SM00963 SRP54-type protein, helical bundle domain AMICO_RS02805 SM01207 AMICO_RS02805 AMICO_RS02815 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02815 SM01086 C-terminal, D2-small domain, of ClpB protein AMICO_RS02900 SM00382 ATPases associated with a variety of cellular activities AMICO_RS02925 SM00883 Chaperonin 10 Kd subunit AMICO_RS02955 SM00400 zinc finger AMICO_RS02955 SM00493 AMICO_RS02955 AMICO_RS02960 SM00363 S4 RNA-binding domain AMICO_RS02965 SM01192 AMICO_RS02965 AMICO_RS02965 SM01193 AMICO_RS02965 AMICO_RS02970 SM00881 CoA binding domain AMICO_RS02975 SM01323 AMICO_RS02975 AMICO_RS03005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS03005 SM00954 Region found in RelA / SpoT proteins AMICO_RS03015 SM00849 Metallo-beta-lactamase superfamily AMICO_RS03025 SM00268 Actin AMICO_RS03065 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS03075 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS03080 SM00968 SMC proteins Flexible Hinge Domain AMICO_RS03125 SM00663 RNA polymerase I subunit A N-terminus AMICO_RS03145 SM00838 Elongation factor G C-terminus AMICO_RS03145 SM00889 Elongation factor G, domain IV AMICO_RS03155 SM01403 AMICO_RS03155 AMICO_RS03175 SM01382 AMICO_RS03175 AMICO_RS03175 SM01383 AMICO_RS03175 AMICO_RS03190 SM00322 K homology RNA-binding domain AMICO_RS03210 SM01374 AMICO_RS03210 AMICO_RS03215 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMICO_RS03280 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS03295 SM00363 S4 RNA-binding domain AMICO_RS03295 SM01390 AMICO_RS03295 AMICO_RS03300 SM00662 RNA polymerases D AMICO_RS03310 SM00382 ATPases associated with a variety of cellular activities AMICO_RS03315 SM00382 ATPases associated with a variety of cellular activities AMICO_RS03360 SM00935 Outer membrane protein (OmpH-like) AMICO_RS03395 SM00481 DNA polymerase alpha chain like domain AMICO_RS03440 SM00382 ATPases associated with a variety of cellular activities AMICO_RS03450 SM00244 prohibitin homologues AMICO_RS03470 SM00487 DEAD-like helicases superfamily AMICO_RS03470 SM00491 AMICO_RS03470 AMICO_RS03485 SM01234 AMICO_RS03485 AMICO_RS03495 SM00393 Putative single-stranded nucleic acids-binding domain AMICO_RS03495 SM01245 AMICO_RS03495 AMICO_RS03505 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMICO_RS03510 SM00387 Histidine kinase-like ATPases AMICO_RS03510 SM00388 His Kinase A (phosphoacceptor) domain AMICO_RS03515 SM00448 cheY-homologous receiver domain AMICO_RS03515 SM00862 Transcriptional regulatory protein, C terminal AMICO_RS03520 SM01387 AMICO_RS03520 AMICO_RS03525 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS03525 SM00322 K homology RNA-binding domain AMICO_RS03535 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS03570 SM00873 B3/4 domain AMICO_RS03570 SM00874 tRNA synthetase B5 domain AMICO_RS03570 SM00896 Ferredoxin-fold anticodon binding domain AMICO_RS03590 SM00463 Small MutS-related domain AMICO_RS03590 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMICO_RS03590 SM00534 ATPase domain of DNA mismatch repair MUTS family AMICO_RS03600 SM01221 AMICO_RS03600 AMICO_RS03600 SM01222 AMICO_RS03600 AMICO_RS03605 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS03620 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS03650 SM00937 AMICO_RS03650 AMICO_RS03670 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS03685 SM00481 DNA polymerase alpha chain like domain AMICO_RS03700 SM00518 AP endonuclease family 2 AMICO_RS03760 SM01400 AMICO_RS03760 AMICO_RS03775 SM00487 DEAD-like helicases superfamily AMICO_RS03775 SM00490 helicase superfamily c-terminal domain AMICO_RS03775 SM00982 AMICO_RS03775 AMICO_RS03775 SM01058 CarD-like/TRCF domain AMICO_RS03805 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS03805 SM01091 Transporter associated domain AMICO_RS03885 SM00382 ATPases associated with a variety of cellular activities AMICO_RS03935 SM00965 Secretin and TonB N terminus short domain AMICO_RS03965 SM00382 ATPases associated with a variety of cellular activities AMICO_RS03970 SM00487 DEAD-like helicases superfamily AMICO_RS03970 SM00490 helicase superfamily c-terminal domain AMICO_RS03980 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMICO_RS04005 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04010 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04115 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04195 SM00842 Cell division protein FtsA AMICO_RS04200 SM00864 Tubulin/FtsZ family, GTPase domain AMICO_RS04200 SM00865 Tubulin/FtsZ family, C-terminal domain AMICO_RS04210 SM00852 Probable molybdopterin binding domain AMICO_RS04215 SM00852 Probable molybdopterin binding domain AMICO_RS04220 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS04250 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMICO_RS04265 SM00899 AMICO_RS04265 AMICO_RS04320 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04330 SM00363 S4 RNA-binding domain AMICO_RS04335 SM00861 Transketolase, pyrimidine binding domain AMICO_RS04355 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AMICO_RS04405 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMICO_RS04470 SM00986 Uracil DNA glycosylase superfamily AMICO_RS04470 SM00987 UreE urease accessory protein, C-terminal domain AMICO_RS04525 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04570 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04570 SM00464 Found in ATP-dependent protease La (LON) AMICO_RS04575 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04575 SM00994 ClpX C4-type zinc finger AMICO_RS04575 SM01086 C-terminal, D2-small domain, of ClpB protein AMICO_RS04590 SM00357 Cold shock protein domain AMICO_RS04635 SM00382 ATPases associated with a variety of cellular activities AMICO_RS04730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMICO_RS04800 SM00155 Phospholipase D. Active site motifs. AMICO_RS04815 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS04885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMICO_RS04915 SM00363 S4 RNA-binding domain AMICO_RS04955 SM00904 Riboflavin kinase AMICO_RS04995 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS04995 SM00322 K homology RNA-binding domain AMICO_RS05005 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS05005 SM01240 AMICO_RS05005 AMICO_RS05020 SM00670 Large family of predicted nucleotide-binding domains AMICO_RS05025 SM00493 AMICO_RS05025 AMICO_RS05085 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS05125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMICO_RS05125 SM00465 GIY-YIG type nucleases (URI domain) AMICO_RS05130 SM00840 AMICO_RS05130 AMICO_RS05180 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMICO_RS05235 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS05250 SM00853 MutL C terminal dimerisation domain AMICO_RS05250 SM01340 AMICO_RS05250 AMICO_RS05255 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMICO_RS05255 SM00534 ATPase domain of DNA mismatch repair MUTS family AMICO_RS05260 SM00732 Likely ribonuclease with RNase H fold. AMICO_RS05265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMICO_RS05275 SM00996 S-adenosyl-L-homocysteine hydrolase AMICO_RS05275 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMICO_RS05310 SM00841 Elongation factor P, C-terminal AMICO_RS05310 SM01185 AMICO_RS05310 AMICO_RS05325 SM00478 endonuclease III AMICO_RS05325 SM00525 AMICO_RS05325 AMICO_RS05340 SM00831 Cation transporter/ATPase, N-terminus AMICO_RS05360 SM00998 Adenylosuccinate lyase C-terminus AMICO_RS05370 SM00382 ATPases associated with a variety of cellular activities AMICO_RS05370 SM00962 SRP54-type protein, GTPase domain AMICO_RS05370 SM00963 SRP54-type protein, helical bundle domain AMICO_RS05395 SM00937 AMICO_RS05395 AMICO_RS05420 SM00358 Double-stranded RNA binding motif AMICO_RS05420 SM00535 Ribonuclease III family AMICO_RS05425 SM00825 Beta-ketoacyl synthase AMICO_RS05435 SM00822 AMICO_RS05435 AMICO_RS05440 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMICO_RS05505 SM00890 Domain of unknown function AMICO_RS05515 SM00650 Ribosomal RNA adenine dimethylases AMICO_RS05520 SM00411 bacterial (prokaryotic) histone like domain AMICO_RS05545 SM00072 Guanylate kinase homologues. AMICO_RS05565 SM00563 Phosphate acyltransferases AMICO_RS05575 SM00363 S4 RNA-binding domain AMICO_RS05760 SM00421 helix_turn_helix, Lux Regulon AMICO_RS05765 SM00382 ATPases associated with a variety of cellular activities AMICO_RS05785 SM01040 BRO family, N-terminal domain AMICO_RS05805 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS05905 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS05925 SM01211 AMICO_RS05925 AMICO_RS05950 SM00798 AICARFT/IMPCHase bienzyme AMICO_RS05950 SM00851 MGS-like domain AMICO_RS05955 SM01209 AMICO_RS05955 AMICO_RS05955 SM01210 AMICO_RS05955 AMICO_RS05960 SM01001 AIR carboxylase AMICO_RS05970 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS05990 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS06080 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS06080 SM00924 MgtE intracellular N domain AMICO_RS06110 SM00448 cheY-homologous receiver domain AMICO_RS06120 SM00858 AMICO_RS06120 AMICO_RS06150 SM00421 helix_turn_helix, Lux Regulon AMICO_RS06150 SM00448 cheY-homologous receiver domain AMICO_RS06155 SM00387 Histidine kinase-like ATPases AMICO_RS06165 SM00882 Coenzyme A transferase AMICO_RS06170 SM00882 Coenzyme A transferase AMICO_RS06340 SM00529 Helix-turn-helix diphteria tox regulatory element AMICO_RS06340 SM00899 AMICO_RS06340 AMICO_RS06345 SM00899 AMICO_RS06345 AMICO_RS06350 SM00899 AMICO_RS06350 AMICO_RS06370 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS06420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMICO_RS06420 SM00475 5'-3' exonuclease AMICO_RS06420 SM00482 DNA polymerase A domain AMICO_RS06425 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS06425 SM01131 AMICO_RS06425 AMICO_RS06515 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS06580 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS06580 SM01091 Transporter associated domain AMICO_RS06630 SM01329 AMICO_RS06630 AMICO_RS06635 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS06635 SM00895 AMICO_RS06635 AMICO_RS06675 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS06675 SM00895 AMICO_RS06675 AMICO_RS06735 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS06775 SM00382 ATPases associated with a variety of cellular activities AMICO_RS06790 SM00849 Metallo-beta-lactamase superfamily AMICO_RS06800 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS06820 SM00487 DEAD-like helicases superfamily AMICO_RS06820 SM00490 helicase superfamily c-terminal domain AMICO_RS06860 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS06880 SM00382 ATPases associated with a variety of cellular activities AMICO_RS06905 SM00919 Malic enzyme, NAD binding domain AMICO_RS06905 SM01274 AMICO_RS06905 AMICO_RS06910 SM00829 Enoylreductase AMICO_RS06950 SM00421 helix_turn_helix, Lux Regulon AMICO_RS06950 SM00448 cheY-homologous receiver domain AMICO_RS06995 SM00838 Elongation factor G C-terminus AMICO_RS06995 SM00889 Elongation factor G, domain IV AMICO_RS07000 SM00845 GatB domain AMICO_RS07015 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMICO_RS07015 SM00292 breast cancer carboxy-terminal domain AMICO_RS07015 SM00532 Ligase N family AMICO_RS07040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMICO_RS07045 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS07055 SM00062 Bacterial periplasmic substrate-binding proteins AMICO_RS07055 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMICO_RS07080 SM00861 Transketolase, pyrimidine binding domain AMICO_RS07085 SM01005 Alanine racemase, C-terminal domain AMICO_RS07165 SM00322 K homology RNA-binding domain AMICO_RS07165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS07175 SM00487 DEAD-like helicases superfamily AMICO_RS07175 SM00490 helicase superfamily c-terminal domain AMICO_RS07215 SM01230 AMICO_RS07215 AMICO_RS07260 SM00836 DALR anticodon binding domain AMICO_RS07260 SM01016 Arginyl tRNA synthetase N terminal dom AMICO_RS07270 SM00957 SecA DEAD-like domain AMICO_RS07270 SM00958 SecA preprotein cross-linking domain AMICO_RS07285 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07290 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07330 SM00729 Elongator protein 3, MiaB family, Radical SAM AMICO_RS07340 SM00271 DnaJ molecular chaperone homology domain AMICO_RS07360 SM00855 Phosphoglycerate mutase family AMICO_RS07415 SM00788 Adenylosuccinate synthetase AMICO_RS07425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMICO_RS07425 SM00245 tail specific protease AMICO_RS07440 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07445 SM00861 Transketolase, pyrimidine binding domain AMICO_RS07480 SM00849 Metallo-beta-lactamase superfamily AMICO_RS07520 SM00257 Lysin motif AMICO_RS07525 SM00357 Cold shock protein domain AMICO_RS07525 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07525 SM00959 Rho termination factor, N-terminal domain AMICO_RS07610 SM00116 Domain in cystathionine beta-synthase and other proteins. AMICO_RS07625 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07695 SM00855 Phosphoglycerate mutase family AMICO_RS07730 SM00316 Ribosomal protein S1-like RNA-binding domain AMICO_RS07735 SM00448 cheY-homologous receiver domain AMICO_RS07745 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07745 SM01086 C-terminal, D2-small domain, of ClpB protein AMICO_RS07765 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMICO_RS07765 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMICO_RS07765 SM00493 AMICO_RS07765 AMICO_RS07780 SM00382 ATPases associated with a variety of cellular activities AMICO_RS07860 SM01221 AMICO_RS07860 AMICO_RS07860 SM01222 AMICO_RS07860 AMICO_RS07940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMICO_RS07940 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMICO_RS07945 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMICO_RS07960 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08000 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08025 SM00986 Uracil DNA glycosylase superfamily AMICO_RS08025 SM00987 UreE urease accessory protein, C-terminal domain AMICO_RS08040 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08115 SM00861 Transketolase, pyrimidine binding domain AMICO_RS08125 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS08125 SM00895 AMICO_RS08125 AMICO_RS08130 SM00506 Appr-1"-p processing enzyme AMICO_RS08150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMICO_RS08190 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS08235 SM01001 AIR carboxylase AMICO_RS08270 SM00838 Elongation factor G C-terminus AMICO_RS08275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMICO_RS08275 SM00267 diguanylate cyclase AMICO_RS08295 SM00091 PAS domain AMICO_RS08400 SM00387 Histidine kinase-like ATPases AMICO_RS08400 SM00433 TopoisomeraseII AMICO_RS08425 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS08455 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08460 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08495 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08495 SM00930 AMICO_RS08495 AMICO_RS08510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMICO_RS08525 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS08545 SM00858 AMICO_RS08545 AMICO_RS08565 SM00382 ATPases associated with a variety of cellular activities AMICO_RS08575 SM00448 cheY-homologous receiver domain AMICO_RS08575 SM00862 Transcriptional regulatory protein, C terminal AMICO_RS08580 SM00091 PAS domain AMICO_RS08580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMICO_RS08580 SM00387 Histidine kinase-like ATPases AMICO_RS08580 SM00388 His Kinase A (phosphoacceptor) domain AMICO_RS08600 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS08650 SM00098 Alkaline phosphatase homologues AMICO_RS08790 SM00984 UDP binding domain AMICO_RS08895 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS08970 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS08970 SM00895 AMICO_RS08970 AMICO_RS08995 SM01130 AMICO_RS08995 AMICO_RS09015 SM00895 AMICO_RS09015 AMICO_RS09025 SM00357 Cold shock protein domain AMICO_RS09030 SM01321 AMICO_RS09030 AMICO_RS09055 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09060 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09110 SM00919 Malic enzyme, NAD binding domain AMICO_RS09110 SM01274 AMICO_RS09110 AMICO_RS09130 SM01119 AMICO_RS09130 AMICO_RS09240 SM00267 diguanylate cyclase AMICO_RS09250 SM00347 helix_turn_helix multiple antibiotic resistance protein AMICO_RS09300 SM01133 AMICO_RS09300 AMICO_RS09310 SM01130 AMICO_RS09310 AMICO_RS09345 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS09355 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS09415 SM00470 ParB-like nuclease domain AMICO_RS09430 SM00318 Staphylococcal nuclease homologues AMICO_RS09470 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09510 SM00421 helix_turn_helix, Lux Regulon AMICO_RS09510 SM00448 cheY-homologous receiver domain AMICO_RS09515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMICO_RS09515 SM00091 PAS domain AMICO_RS09515 SM00387 Histidine kinase-like ATPases AMICO_RS09525 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AMICO_RS09530 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMICO_RS09530 SM00895 AMICO_RS09530 AMICO_RS09575 SM00346 helix_turn_helix isocitrate lyase regulation AMICO_RS09600 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09650 SM00421 helix_turn_helix, Lux Regulon AMICO_RS09650 SM00448 cheY-homologous receiver domain AMICO_RS09775 SM00354 helix_turn _helix lactose operon repressor AMICO_RS09785 SM00014 Acid phosphatase homologues AMICO_RS09790 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09795 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMICO_RS09830 SM00091 PAS domain AMICO_RS09830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS09835 SM00091 PAS domain AMICO_RS09835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS09855 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS09875 SM00852 Probable molybdopterin binding domain AMICO_RS09880 SM00382 ATPases associated with a variety of cellular activities AMICO_RS09880 SM00843 AMICO_RS09880 AMICO_RS09885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS09905 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS09945 SM00530 Helix-turn-helix XRE-family like proteins AMICO_RS09960 SM00267 diguanylate cyclase AMICO_RS09995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS10000 SM00091 PAS domain AMICO_RS10000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMICO_RS10010 SM00387 Histidine kinase-like ATPases