locus-tag class description AMJAP_RS00005 PF00308 Bacterial dnaA protein AMJAP_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AMJAP_RS00005 PF11638 DnaA N-terminal domain AMJAP_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AMJAP_RS00010 PF02767 DNA polymerase III beta subunit, central domain AMJAP_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AMJAP_RS00015 PF02463 RecF/RecN/SMC N terminal domain AMJAP_RS00020 PF01751 Toprim domain AMJAP_RS00020 PF18053 DNA gyrase B subunit insert domain AMJAP_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus AMJAP_RS00020 PF00204 DNA gyrase B AMJAP_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS00045 PF00665 Integrase core domain AMJAP_RS00115 PF05746 DALR anticodon binding domain AMJAP_RS00115 PF02092 Glycyl-tRNA synthetase beta subunit AMJAP_RS00120 PF02091 Glycyl-tRNA synthetase alpha subunit AMJAP_RS00135 PF02386 Cation transport protein AMJAP_RS00140 PF02254 TrkA-N domain AMJAP_RS00140 PF02080 TrkA-C domain AMJAP_RS00145 PF01189 16S rRNA methyltransferase RsmB/F AMJAP_RS00145 PF01029 NusB family AMJAP_RS00150 PF02911 Formyl transferase, C-terminal domain AMJAP_RS00150 PF00551 Formyl transferase AMJAP_RS00155 PF01327 Polypeptide deformylase AMJAP_RS00165 PF17782 DprA winged helix domain AMJAP_RS00165 PF02481 DNA recombination-mediator protein A AMJAP_RS00170 PF00731 AIR carboxylase AMJAP_RS00175 PF01300 Telomere recombination AMJAP_RS00180 PF01218 Coproporphyrinogen III oxidase AMJAP_RS00185 PF01488 Shikimate / quinate 5-dehydrogenase AMJAP_RS00185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMJAP_RS00185 PF08501 Shikimate dehydrogenase substrate binding domain AMJAP_RS00190 PF05362 Lon protease (S16) C-terminal proteolytic domain AMJAP_RS00190 PF13654 AAA domain AMJAP_RS00240 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS00245 PF01432 Peptidase family M3 AMJAP_RS00250 PF09526 Probable metal-binding protein (DUF2387) AMJAP_RS00255 PF13302 Acetyltransferase (GNAT) domain AMJAP_RS00255 PF13673 Acetyltransferase (GNAT) domain AMJAP_RS00255 PF00117 Glutamine amidotransferase class-I AMJAP_RS00255 PF00958 GMP synthase C terminal domain AMJAP_RS00255 PF03352 Methyladenine glycosylase AMJAP_RS00260 PF07995 Glucose / Sorbosone dehydrogenase AMJAP_RS00265 PF00892 EamA-like transporter family AMJAP_RS00270 PF00950 ABC 3 transport family AMJAP_RS00275 PF00005 ABC transporter AMJAP_RS00280 PF01475 Ferric uptake regulator family AMJAP_RS00285 PF01297 Zinc-uptake complex component A periplasmic AMJAP_RS00315 PF03466 LysR substrate binding domain AMJAP_RS00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS00350 PF00462 Glutaredoxin AMJAP_RS00350 PF08534 Redoxin AMJAP_RS00355 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AMJAP_RS00365 PF00403 Heavy-metal-associated domain AMJAP_RS00375 PF13411 MerR HTH family regulatory protein AMJAP_RS00385 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMJAP_RS00385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMJAP_RS00390 PF00860 Permease family AMJAP_RS00400 PF03144 Elongation factor Tu domain 2 AMJAP_RS00400 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS00400 PF03764 Elongation factor G, domain IV AMJAP_RS00400 PF14492 Elongation Factor G, domain II AMJAP_RS00400 PF00679 Elongation factor G C-terminus AMJAP_RS00405 PF13188 PAS domain AMJAP_RS00405 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS00405 PF00158 Sigma-54 interaction domain AMJAP_RS00415 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS00415 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS00415 PF00970 Oxidoreductase FAD-binding domain AMJAP_RS00420 PF00005 ABC transporter AMJAP_RS00420 PF02687 FtsX-like permease family AMJAP_RS00420 PF12704 MacB-like periplasmic core domain AMJAP_RS00460 PF01268 Formate--tetrahydrofolate ligase AMJAP_RS00470 PF12833 Helix-turn-helix domain AMJAP_RS00470 PF02311 AraC-like ligand binding domain AMJAP_RS00485 PF12852 Cupin AMJAP_RS00485 PF12833 Helix-turn-helix domain AMJAP_RS00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS00490 PF03466 LysR substrate binding domain AMJAP_RS00500 PF00106 short chain dehydrogenase AMJAP_RS00510 PF00582 Universal stress protein family AMJAP_RS00515 PF05088 Bacterial NAD-glutamate dehydrogenase AMJAP_RS00520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS00535 PF00158 Sigma-54 interaction domain AMJAP_RS00535 PF00072 Response regulator receiver domain AMJAP_RS00535 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS00540 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS00550 PF03600 Citrate transporter AMJAP_RS00550 PF02080 TrkA-C domain AMJAP_RS00565 PF13183 4Fe-4S dicluster domain AMJAP_RS00565 PF02754 Cysteine-rich domain AMJAP_RS00570 PF01565 FAD binding domain AMJAP_RS00575 PF01565 FAD binding domain AMJAP_RS00575 PF02913 FAD linked oxidases, C-terminal domain AMJAP_RS00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS00585 PF03466 LysR substrate binding domain AMJAP_RS00610 PF04362 Bacterial Fe(2+) trafficking AMJAP_RS00615 PF10576 Iron-sulfur binding domain of endonuclease III AMJAP_RS00615 PF00633 Helix-hairpin-helix motif AMJAP_RS00615 PF14815 NUDIX domain AMJAP_RS00615 PF00730 HhH-GPD superfamily base excision DNA repair protein AMJAP_RS00625 PF00475 Imidazoleglycerol-phosphate dehydratase AMJAP_RS00630 PF00117 Glutamine amidotransferase class-I AMJAP_RS00635 PF00977 Histidine biosynthesis protein AMJAP_RS00640 PF00155 Aminotransferase class I and II AMJAP_RS00650 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS00655 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS00660 PF00563 EAL domain AMJAP_RS00660 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS00660 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS00670 PF00490 Delta-aminolevulinic acid dehydratase AMJAP_RS00675 PF13089 Polyphosphate kinase N-terminal domain AMJAP_RS00675 PF02503 Polyphosphate kinase middle domain AMJAP_RS00675 PF13090 Polyphosphate kinase C-terminal domain 2 AMJAP_RS00675 PF17941 Polyphosphate kinase C-terminal domain 1 AMJAP_RS00680 PF00005 ABC transporter AMJAP_RS00685 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMJAP_RS00690 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS00695 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS00700 PF11066 Protein of unknown function (DUF2867) AMJAP_RS00700 PF13460 NAD(P)H-binding AMJAP_RS00705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS00705 PF03466 LysR substrate binding domain AMJAP_RS00710 PF17191 RecG wedge domain AMJAP_RS00710 PF00271 Helicase conserved C-terminal domain AMJAP_RS00710 PF00270 DEAD/DEAH box helicase AMJAP_RS00725 PF00037 4Fe-4S binding domain AMJAP_RS00730 PF01467 Cytidylyltransferase-like AMJAP_RS00735 PF01435 Peptidase family M48 AMJAP_RS00740 PF00171 Aldehyde dehydrogenase family AMJAP_RS00760 PF02881 SRP54-type protein, helical bundle domain AMJAP_RS00760 PF00448 SRP54-type protein, GTPase domain AMJAP_RS00765 PF00005 ABC transporter AMJAP_RS00770 PF18075 FtsX extracellular domain AMJAP_RS00775 PF04545 Sigma-70, region 4 AMJAP_RS00775 PF04542 Sigma-70 region 2 AMJAP_RS00775 PF00140 Sigma-70 factor, region 1.2 AMJAP_RS00780 PF04241 Protein of unknown function (DUF423) AMJAP_RS00785 PF05690 Thiazole biosynthesis protein ThiG AMJAP_RS00785 PF02597 ThiS family AMJAP_RS00790 PF05690 Thiazole biosynthesis protein ThiG AMJAP_RS00795 PF02390 Putative methyltransferase AMJAP_RS00810 PF01329 Pterin 4 alpha carbinolamine dehydratase AMJAP_RS00825 PF00072 Response regulator receiver domain AMJAP_RS00825 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS00830 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS00830 PF16750 Sensor domain of 2-component histidine kinase AMJAP_RS00830 PF00672 HAMP domain AMJAP_RS00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS00835 PF00563 EAL domain AMJAP_RS00835 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS00835 PF08448 PAS fold AMJAP_RS00840 PF04996 Succinylarginine dihydrolase AMJAP_RS00845 PF00171 Aldehyde dehydrogenase family AMJAP_RS00850 PF04958 Arginine N-succinyltransferase beta subunit AMJAP_RS00865 PF00202 Aminotransferase class-III AMJAP_RS00870 PF00543 Nitrogen regulatory protein P-II AMJAP_RS00875 PF00909 Ammonium Transporter Family AMJAP_RS00880 PF00543 Nitrogen regulatory protein P-II AMJAP_RS00885 PF04380 Membrane fusogenic activity AMJAP_RS00890 PF00989 PAS fold AMJAP_RS00895 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMJAP_RS00895 PF01078 Magnesium chelatase, subunit ChlI AMJAP_RS00900 PF00563 EAL domain AMJAP_RS00900 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS00900 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS00905 PF13361 UvrD-like helicase C-terminal domain AMJAP_RS00905 PF00580 UvrD/REP helicase N-terminal domain AMJAP_RS00910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMJAP_RS00915 PF00563 EAL domain AMJAP_RS00915 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS00915 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS00935 PF00849 RNA pseudouridylate synthase AMJAP_RS00940 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS00940 PF00563 EAL domain AMJAP_RS00940 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS00945 PF03734 L,D-transpeptidase catalytic domain AMJAP_RS00945 PF01471 Putative peptidoglycan binding domain AMJAP_RS00955 PF12833 Helix-turn-helix domain AMJAP_RS00960 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS00965 PF02803 Thiolase, C-terminal domain AMJAP_RS00965 PF00108 Thiolase, N-terminal domain AMJAP_RS00970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS00970 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS00970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS00975 PF00106 short chain dehydrogenase AMJAP_RS00980 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS00980 PF00501 AMP-binding enzyme AMJAP_RS00985 PF01569 PAP2 superfamily AMJAP_RS00990 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMJAP_RS01000 PF00563 EAL domain AMJAP_RS01000 PF08668 HDOD domain AMJAP_RS01010 PF00920 Dehydratase family AMJAP_RS01040 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS01040 PF00072 Response regulator receiver domain AMJAP_RS01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS01050 PF00696 Amino acid kinase family AMJAP_RS01050 PF00583 Acetyltransferase (GNAT) family AMJAP_RS01055 PF01546 Peptidase family M20/M25/M40 AMJAP_RS01055 PF07687 Peptidase dimerisation domain AMJAP_RS01060 PF01384 Phosphate transporter family AMJAP_RS01065 PF01865 Protein of unknown function DUF47 AMJAP_RS01070 PF03710 Glutamate-ammonia ligase adenylyltransferase AMJAP_RS01070 PF08335 GlnD PII-uridylyltransferase AMJAP_RS01075 PF01063 Amino-transferase class IV AMJAP_RS01080 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AMJAP_RS01090 PF00535 Glycosyl transferase family 2 AMJAP_RS01105 PF01531 Glycosyl transferase family 11 AMJAP_RS01110 PF00535 Glycosyl transferase family 2 AMJAP_RS01115 PF03279 Bacterial lipid A biosynthesis acyltransferase AMJAP_RS01120 PF00664 ABC transporter transmembrane region AMJAP_RS01120 PF00005 ABC transporter AMJAP_RS01125 PF01467 Cytidylyltransferase-like AMJAP_RS01125 PF00294 pfkB family carbohydrate kinase AMJAP_RS01135 PF00248 Aldo/keto reductase family AMJAP_RS01140 PF01266 FAD dependent oxidoreductase AMJAP_RS01145 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMJAP_RS01150 PF13580 SIS domain AMJAP_RS01155 PF01491 Frataxin-like domain AMJAP_RS01165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMJAP_RS01165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMJAP_RS01170 PF01678 Diaminopimelate epimerase AMJAP_RS01180 PF00589 Phage integrase family AMJAP_RS01180 PF02899 Phage integrase, N-terminal SAM-like domain AMJAP_RS01200 PF12833 Helix-turn-helix domain AMJAP_RS01215 PF01575 MaoC like domain AMJAP_RS01225 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS01225 PF00501 AMP-binding enzyme AMJAP_RS01230 PF00989 PAS fold AMJAP_RS01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS01230 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS01235 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS01235 PF00072 Response regulator receiver domain AMJAP_RS01240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMJAP_RS01240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMJAP_RS01250 PF04055 Radical SAM superfamily AMJAP_RS01250 PF06969 HemN C-terminal domain AMJAP_RS01255 PF01725 Ham1 family AMJAP_RS01265 PF07021 Methionine biosynthesis protein MetW AMJAP_RS01265 PF00561 alpha/beta hydrolase fold AMJAP_RS01270 PF00561 alpha/beta hydrolase fold AMJAP_RS01275 PF02594 Uncharacterised ACR, YggU family COG1872 AMJAP_RS01280 PF02325 YGGT family AMJAP_RS01285 PF03807 NADP oxidoreductase coenzyme F420-dependent AMJAP_RS01285 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMJAP_RS01290 PF01168 Alanine racemase, N-terminal domain AMJAP_RS01295 PF00437 Type II/IV secretion system protein AMJAP_RS01300 PF00437 Type II/IV secretion system protein AMJAP_RS01305 PF01979 Amidohydrolase family AMJAP_RS01310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMJAP_RS01310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMJAP_RS01315 PF00156 Phosphoribosyl transferase domain AMJAP_RS01320 PF03652 Holliday junction resolvase AMJAP_RS01325 PF02622 Uncharacterized ACR, COG1678 AMJAP_RS01335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMJAP_RS01335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMJAP_RS01340 PF04452 RNA methyltransferase AMJAP_RS01345 PF02772 S-adenosylmethionine synthetase, central domain AMJAP_RS01345 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMJAP_RS01345 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMJAP_RS01350 PF02779 Transketolase, pyrimidine binding domain AMJAP_RS01350 PF02780 Transketolase, C-terminal domain AMJAP_RS01350 PF00456 Transketolase, thiamine diphosphate binding domain AMJAP_RS01355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMJAP_RS01355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMJAP_RS01360 PF00162 Phosphoglycerate kinase AMJAP_RS01365 PF01116 Fructose-bisphosphate aldolase class-II AMJAP_RS01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS01375 PF03466 LysR substrate binding domain AMJAP_RS01400 PF03167 Uracil DNA glycosylase superfamily AMJAP_RS01410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS01410 PF03466 LysR substrate binding domain AMJAP_RS01450 PF03880 DbpA RNA binding domain AMJAP_RS01450 PF00270 DEAD/DEAH box helicase AMJAP_RS01450 PF00271 Helicase conserved C-terminal domain AMJAP_RS01455 PF02146 Sir2 family AMJAP_RS01460 PF01274 Malate synthase AMJAP_RS01475 PF00924 Mechanosensitive ion channel AMJAP_RS01475 PF12795 Mechanosensitive ion channel porin domain AMJAP_RS01475 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMJAP_RS01485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMJAP_RS01485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMJAP_RS01490 PF06865 Pyrimidine/purine nucleoside phosphorylase AMJAP_RS01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS01495 PF03466 LysR substrate binding domain AMJAP_RS01500 PF07690 Major Facilitator Superfamily AMJAP_RS01505 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMJAP_RS01510 PF03653 Uncharacterised protein family (UPF0093) AMJAP_RS01520 PF01209 ubiE/COQ5 methyltransferase family AMJAP_RS01530 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS01530 PF07724 AAA domain (Cdc48 subfamily) AMJAP_RS01535 PF00227 Proteasome subunit AMJAP_RS01545 PF05746 DALR anticodon binding domain AMJAP_RS01545 PF03485 Arginyl tRNA synthetase N terminal domain AMJAP_RS01545 PF00750 tRNA synthetases class I (R) AMJAP_RS01550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMJAP_RS01550 PF18074 Primosomal protein N C-terminal domain AMJAP_RS01550 PF17764 3′ DNA-binding domain (3′BD) AMJAP_RS01550 PF00271 Helicase conserved C-terminal domain AMJAP_RS01550 PF00270 DEAD/DEAH box helicase AMJAP_RS01555 PF01197 Ribosomal protein L31 AMJAP_RS01560 PF03949 Malic enzyme, NAD binding domain AMJAP_RS01560 PF00390 Malic enzyme, N-terminal domain AMJAP_RS01565 PF17092 Penicillin-binding protein OB-like domain AMJAP_RS01565 PF00905 Penicillin binding protein transpeptidase domain AMJAP_RS01565 PF00912 Transglycosylase AMJAP_RS01570 PF11104 Type IV pilus assembly protein PilM; AMJAP_RS01575 PF05137 Fimbrial assembly protein (PilN) AMJAP_RS01580 PF04350 Pilus assembly protein, PilO AMJAP_RS01585 PF04351 Pilus assembly protein, PilP AMJAP_RS01590 PF03958 Bacterial type II/III secretion system short domain AMJAP_RS01590 PF00263 Bacterial type II and III secretion system protein AMJAP_RS01590 PF11741 AMIN domain AMJAP_RS01590 PF07660 Secretin and TonB N terminus short domain AMJAP_RS01595 PF01202 Shikimate kinase AMJAP_RS01600 PF01761 3-dehydroquinate synthase AMJAP_RS01610 PF04898 Glutamate synthase central domain AMJAP_RS01610 PF00310 Glutamine amidotransferases class-II AMJAP_RS01610 PF01645 Conserved region in glutamate synthase AMJAP_RS01610 PF01493 GXGXG motif AMJAP_RS01615 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS01615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMJAP_RS01620 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMJAP_RS01625 PF00484 Carbonic anhydrase AMJAP_RS01630 PF01053 Cys/Met metabolism PLP-dependent enzyme AMJAP_RS01635 PF18073 Rubredoxin metal binding domain AMJAP_RS01640 PF07238 PilZ domain AMJAP_RS01645 PF00005 ABC transporter AMJAP_RS01645 PF12848 ABC transporter AMJAP_RS01650 PF00464 Serine hydroxymethyltransferase AMJAP_RS01655 PF03477 ATP cone domain AMJAP_RS01660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMJAP_RS01660 PF01872 RibD C-terminal domain AMJAP_RS01665 PF00677 Lumazine binding domain AMJAP_RS01670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMJAP_RS01670 PF00925 GTP cyclohydrolase II AMJAP_RS01675 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMJAP_RS01680 PF01029 NusB family AMJAP_RS01685 PF02769 AIR synthase related protein, C-terminal domain AMJAP_RS01685 PF00586 AIR synthase related protein, N-terminal domain AMJAP_RS01690 PF04608 Phosphatidylglycerophosphatase A AMJAP_RS01700 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS01700 PF00072 Response regulator receiver domain AMJAP_RS01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS01710 PF00925 GTP cyclohydrolase II AMJAP_RS01715 PF02780 Transketolase, C-terminal domain AMJAP_RS01715 PF02779 Transketolase, pyrimidine binding domain AMJAP_RS01715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMJAP_RS01720 PF00348 Polyprenyl synthetase AMJAP_RS01725 PF02609 Exonuclease VII small subunit AMJAP_RS01730 PF01618 MotA/TolQ/ExbB proton channel family AMJAP_RS01735 PF00691 OmpA family AMJAP_RS01735 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMJAP_RS01740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMJAP_RS01775 PF00202 Aminotransferase class-III AMJAP_RS01785 PF00034 Cytochrome c AMJAP_RS01800 PF00209 Sodium:neurotransmitter symporter family AMJAP_RS01805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMJAP_RS01805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMJAP_RS01845 PF01668 SmpB protein AMJAP_RS01850 PF00209 Sodium:neurotransmitter symporter family AMJAP_RS01855 PF03364 Polyketide cyclase / dehydrase and lipid transport AMJAP_RS01860 PF03658 RnfH family Ubiquitin AMJAP_RS01865 PF04355 SmpA / OmlA family AMJAP_RS01870 PF01475 Ferric uptake regulator family AMJAP_RS01875 PF02463 RecF/RecN/SMC N terminal domain AMJAP_RS01880 PF01025 GrpE AMJAP_RS01885 PF00012 Hsp70 protein AMJAP_RS01890 PF00226 DnaJ domain AMJAP_RS01890 PF00684 DnaJ central domain AMJAP_RS01890 PF01556 DnaJ C terminal domain AMJAP_RS01895 PF06426 Serine acetyltransferase, N-terminal AMJAP_RS01895 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS01900 PF05173 Dihydrodipicolinate reductase, C-terminus AMJAP_RS01900 PF01113 Dihydrodipicolinate reductase, N-terminus AMJAP_RS01905 PF11944 Protein of unknown function (DUF3461) AMJAP_RS01910 PF01784 NIF3 (NGG1p interacting factor 3) AMJAP_RS01915 PF01914 MarC family integral membrane protein AMJAP_RS01920 PF01679 Proteolipid membrane potential modulator AMJAP_RS01935 PF12801 4Fe-4S binding domain AMJAP_RS01935 PF04205 FMN-binding domain AMJAP_RS01945 PF01618 MotA/TolQ/ExbB proton channel family AMJAP_RS01950 PF02472 Biopolymer transport protein ExbD/TolR AMJAP_RS01960 PF07715 TonB-dependent Receptor Plug Domain AMJAP_RS01960 PF00593 TonB dependent receptor AMJAP_RS01965 PF00293 NUDIX domain AMJAP_RS01970 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS01980 PF01910 Thiamine-binding protein AMJAP_RS01985 PF00571 CBS domain AMJAP_RS01985 PF01595 Cyclin M transmembrane N-terminal domain AMJAP_RS01985 PF03471 Transporter associated domain AMJAP_RS01995 PF02978 Signal peptide binding domain AMJAP_RS01995 PF02881 SRP54-type protein, helical bundle domain AMJAP_RS01995 PF00448 SRP54-type protein, GTPase domain AMJAP_RS02000 PF00886 Ribosomal protein S16 AMJAP_RS02005 PF05239 PRC-barrel domain AMJAP_RS02005 PF01782 RimM N-terminal domain AMJAP_RS02010 PF01746 tRNA (Guanine-1)-methyltransferase AMJAP_RS02015 PF01245 Ribosomal protein L19 AMJAP_RS02025 PF02899 Phage integrase, N-terminal SAM-like domain AMJAP_RS02025 PF00589 Phage integrase family AMJAP_RS02030 PF10411 Disulfide bond isomerase protein N-terminus AMJAP_RS02030 PF13098 Thioredoxin-like domain AMJAP_RS02035 PF00742 Homoserine dehydrogenase AMJAP_RS02035 PF01842 ACT domain AMJAP_RS02035 PF03447 Homoserine dehydrogenase, NAD binding domain AMJAP_RS02040 PF14821 Threonine synthase N terminus AMJAP_RS02040 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS02050 PF17768 RecJ OB domain AMJAP_RS02050 PF01368 DHH family AMJAP_RS02050 PF02272 DHHA1 domain AMJAP_RS02060 PF01261 Xylose isomerase-like TIM barrel AMJAP_RS02065 PF04717 Type VI secretion system, phage-baseplate injector AMJAP_RS02070 PF13091 PLD-like domain AMJAP_RS02070 PF13396 Phospholipase_D-nuclease N-terminal AMJAP_RS02100 PF00916 Sulfate permease family AMJAP_RS02100 PF01740 STAS domain AMJAP_RS02105 PF00293 NUDIX domain AMJAP_RS02110 PF06853 Protein of unknown function (DUF1249) AMJAP_RS02115 PF00149 Calcineurin-like phosphoesterase AMJAP_RS02120 PF05728 Uncharacterised protein family (UPF0227) AMJAP_RS02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS02125 PF00204 DNA gyrase B AMJAP_RS02125 PF00986 DNA gyrase B subunit, carboxyl terminus AMJAP_RS02125 PF01751 Toprim domain AMJAP_RS02130 PF00521 DNA gyrase/topoisomerase IV, subunit A AMJAP_RS02130 PF03989 DNA gyrase C-terminal domain, beta-propeller AMJAP_RS02135 PF00575 S1 RNA binding domain AMJAP_RS02155 PF01810 LysE type translocator AMJAP_RS02160 PF01925 Sulfite exporter TauE/SafE AMJAP_RS02170 PF00171 Aldehyde dehydrogenase family AMJAP_RS02175 PF01467 Cytidylyltransferase-like AMJAP_RS02185 PF02590 Predicted SPOUT methyltransferase AMJAP_RS02190 PF00905 Penicillin binding protein transpeptidase domain AMJAP_RS02190 PF03717 Penicillin-binding Protein dimerisation domain AMJAP_RS02195 PF01098 Cell cycle protein AMJAP_RS02200 PF13406 Transglycosylase SLT domain AMJAP_RS02205 PF05036 Sporulation related domain AMJAP_RS02205 PF03330 Lytic transglycolase AMJAP_RS02210 PF07943 Penicillin-binding protein 5, C-terminal domain AMJAP_RS02210 PF00768 D-alanyl-D-alanine carboxypeptidase AMJAP_RS02215 PF01063 Amino-transferase class IV AMJAP_RS02220 PF04359 Protein of unknown function (DUF493) AMJAP_RS02225 PF03099 Biotin/lipoate A/B protein ligase family AMJAP_RS02230 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMJAP_RS02230 PF04055 Radical SAM superfamily AMJAP_RS02240 PF00535 Glycosyl transferase family 2 AMJAP_RS02245 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AMJAP_RS02250 PF01569 PAP2 superfamily AMJAP_RS02265 PF03466 LysR substrate binding domain AMJAP_RS02265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS02275 PF06144 DNA polymerase III, delta subunit AMJAP_RS02275 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AMJAP_RS02285 PF00133 tRNA synthetases class I (I, L, M and V) AMJAP_RS02285 PF08264 Anticodon-binding domain of tRNA AMJAP_RS02285 PF13603 Leucyl-tRNA synthetase, Domain 2 AMJAP_RS02295 PF00795 Carbon-nitrogen hydrolase AMJAP_RS02300 PF03471 Transporter associated domain AMJAP_RS02300 PF00571 CBS domain AMJAP_RS02305 PF02130 Uncharacterized protein family UPF0054 AMJAP_RS02310 PF02562 PhoH-like protein AMJAP_RS02315 PF04055 Radical SAM superfamily AMJAP_RS02315 PF01938 TRAM domain AMJAP_RS02315 PF00919 Uncharacterized protein family UPF0004 AMJAP_RS02325 PF05656 Protein of unknown function (DUF805) AMJAP_RS02330 PF08448 PAS fold AMJAP_RS02330 PF00563 EAL domain AMJAP_RS02330 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS02335 PF10135 Rod binding protein AMJAP_RS02335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMJAP_RS02340 PF04055 Radical SAM superfamily AMJAP_RS02345 PF08207 Elongation factor P (EF-P) KOW-like domain AMJAP_RS02345 PF01132 Elongation factor P (EF-P) OB domain AMJAP_RS02345 PF09285 Elongation factor P, C-terminal AMJAP_RS02350 PF00152 tRNA synthetases class II (D, K and N) AMJAP_RS02355 PF00563 EAL domain AMJAP_RS02355 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS02355 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS02365 PF00155 Aminotransferase class I and II AMJAP_RS02370 PF08502 LeuA allosteric (dimerisation) domain AMJAP_RS02370 PF00682 HMGL-like AMJAP_RS02380 PF00583 Acetyltransferase (GNAT) family AMJAP_RS02390 PF00072 Response regulator receiver domain AMJAP_RS02395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS02395 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS02405 PF16658 Class II release factor RF3, C-terminal domain AMJAP_RS02405 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS02405 PF03144 Elongation factor Tu domain 2 AMJAP_RS02410 PF01026 TatD related DNase AMJAP_RS02420 PF02801 Beta-ketoacyl synthase, C-terminal domain AMJAP_RS02420 PF00109 Beta-ketoacyl synthase, N-terminal domain AMJAP_RS02425 PF13488 Glycine zipper AMJAP_RS02425 PF00691 OmpA family AMJAP_RS02450 PF01842 ACT domain AMJAP_RS02450 PF01909 Nucleotidyltransferase domain AMJAP_RS02450 PF01966 HD domain AMJAP_RS02450 PF08335 GlnD PII-uridylyltransferase AMJAP_RS02455 PF00557 Metallopeptidase family M24 AMJAP_RS02460 PF00318 Ribosomal protein S2 AMJAP_RS02465 PF00889 Elongation factor TS AMJAP_RS02470 PF00696 Amino acid kinase family AMJAP_RS02475 PF01765 Ribosome recycling factor AMJAP_RS02480 PF01255 Putative undecaprenyl diphosphate synthase AMJAP_RS02490 PF02163 Peptidase family M50 AMJAP_RS02490 PF17820 PDZ domain AMJAP_RS02490 PF13180 PDZ domain AMJAP_RS02495 PF07244 Surface antigen variable number repeat AMJAP_RS02495 PF01103 Surface antigen AMJAP_RS02505 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS02505 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMJAP_RS02510 PF07977 FabA-like domain AMJAP_RS02515 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS02515 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMJAP_RS02520 PF02684 Lipid-A-disaccharide synthetase AMJAP_RS02525 PF01351 Ribonuclease HII AMJAP_RS02530 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMJAP_RS02530 PF01336 OB-fold nucleic acid binding domain AMJAP_RS02530 PF02811 PHP domain AMJAP_RS02530 PF14579 Helix-hairpin-helix motif AMJAP_RS02530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMJAP_RS02535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMJAP_RS02540 PF01171 PP-loop family AMJAP_RS02540 PF09179 TilS substrate binding domain AMJAP_RS02540 PF11734 TilS substrate C-terminal domain AMJAP_RS02545 PF06418 CTP synthase N-terminus AMJAP_RS02545 PF00117 Glutamine amidotransferase class-I AMJAP_RS02550 PF00113 Enolase, C-terminal TIM barrel domain AMJAP_RS02550 PF03952 Enolase, N-terminal domain AMJAP_RS02555 PF04977 Septum formation initiator AMJAP_RS02560 PF01142 tRNA pseudouridine synthase D (TruD) AMJAP_RS02565 PF01975 Survival protein SurE AMJAP_RS02580 PF01476 LysM domain AMJAP_RS02580 PF01551 Peptidase family M23 AMJAP_RS02585 PF04545 Sigma-70, region 4 AMJAP_RS02585 PF04542 Sigma-70 region 2 AMJAP_RS02585 PF00140 Sigma-70 factor, region 1.2 AMJAP_RS02585 PF04539 Sigma-70 region 3 AMJAP_RS02590 PF05190 MutS family domain IV AMJAP_RS02590 PF00488 MutS domain V AMJAP_RS02590 PF05192 MutS domain III AMJAP_RS02590 PF01624 MutS domain I AMJAP_RS02590 PF05188 MutS domain II AMJAP_RS02595 PF00535 Glycosyl transferase family 2 AMJAP_RS02620 PF10531 SLBB domain AMJAP_RS02620 PF02563 Polysaccharide biosynthesis/export protein AMJAP_RS02630 PF00005 ABC transporter AMJAP_RS02640 PF16363 GDP-mannose 4,6 dehydratase AMJAP_RS02645 PF04321 RmlD substrate binding domain AMJAP_RS02650 PF00483 Nucleotidyl transferase AMJAP_RS02655 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMJAP_RS02660 PF00535 Glycosyl transferase family 2 AMJAP_RS02670 PF05159 Capsule polysaccharide biosynthesis protein AMJAP_RS02675 PF00106 short chain dehydrogenase AMJAP_RS02680 PF05159 Capsule polysaccharide biosynthesis protein AMJAP_RS02685 PF00155 Aminotransferase class I and II AMJAP_RS02690 PF08659 KR domain AMJAP_RS02690 PF00550 Phosphopantetheine attachment site AMJAP_RS02690 PF02801 Beta-ketoacyl synthase, C-terminal domain AMJAP_RS02690 PF00109 Beta-ketoacyl synthase, N-terminal domain AMJAP_RS02690 PF00698 Acyl transferase domain AMJAP_RS02690 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS02690 PF14765 Polyketide synthase dehydratase AMJAP_RS02690 PF16197 Ketoacyl-synthetase C-terminal extension AMJAP_RS02695 PF00067 Cytochrome P450 AMJAP_RS02705 PF02464 Competence-damaged protein AMJAP_RS02710 PF00154 recA bacterial DNA recombination protein AMJAP_RS02715 PF02631 RecX family AMJAP_RS02720 PF01411 tRNA synthetases class II (A) AMJAP_RS02720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMJAP_RS02720 PF02272 DHHA1 domain AMJAP_RS02725 PF01842 ACT domain AMJAP_RS02725 PF13840 ACT domain AMJAP_RS02725 PF00696 Amino acid kinase family AMJAP_RS02730 PF02599 Global regulator protein family AMJAP_RS02760 PF00664 ABC transporter transmembrane region AMJAP_RS02760 PF00005 ABC transporter AMJAP_RS02760 PF03412 Peptidase C39 family AMJAP_RS02765 PF00664 ABC transporter transmembrane region AMJAP_RS02765 PF00005 ABC transporter AMJAP_RS02765 PF03412 Peptidase C39 family AMJAP_RS02775 PF02926 THUMP domain AMJAP_RS02775 PF02568 Thiamine biosynthesis protein (ThiI) AMJAP_RS02780 PF04277 Oxaloacetate decarboxylase, gamma chain AMJAP_RS02785 PF00682 HMGL-like AMJAP_RS02785 PF02436 Conserved carboxylase domain AMJAP_RS02785 PF00364 Biotin-requiring enzyme AMJAP_RS02790 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AMJAP_RS02795 PF00850 Histone deacetylase domain AMJAP_RS02800 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS02800 PF00072 Response regulator receiver domain AMJAP_RS02830 PF01584 CheW-like domain AMJAP_RS02830 PF00072 Response regulator receiver domain AMJAP_RS02835 PF03705 CheR methyltransferase, all-alpha domain AMJAP_RS02835 PF01739 CheR methyltransferase, SAM binding domain AMJAP_RS02840 PF00460 Flagella basal body rod protein AMJAP_RS02845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMJAP_RS02845 PF00460 Flagella basal body rod protein AMJAP_RS02850 PF03963 Flagellar hook capping protein - N-terminal region AMJAP_RS02855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMJAP_RS02855 PF00460 Flagella basal body rod protein AMJAP_RS02855 PF07559 Flagellar basal body protein FlaE AMJAP_RS02860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMJAP_RS02860 PF00460 Flagella basal body rod protein AMJAP_RS02865 PF00460 Flagella basal body rod protein AMJAP_RS02865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMJAP_RS02870 PF02107 Flagellar L-ring protein AMJAP_RS02875 PF02119 Flagellar P-ring protein AMJAP_RS02880 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AMJAP_RS02880 PF10135 Rod binding protein AMJAP_RS02890 PF00669 Bacterial flagellin N-terminal helical region AMJAP_RS02900 PF02561 Flagellar protein FliS AMJAP_RS02905 PF02465 Flagellar hook-associated protein 2 N-terminus AMJAP_RS02905 PF07196 Flagellin hook IN motif AMJAP_RS02905 PF07195 Flagellar hook-associated protein 2 C-terminus AMJAP_RS02915 PF00669 Bacterial flagellin N-terminal helical region AMJAP_RS02915 PF00700 Bacterial flagellin C-terminal helical region AMJAP_RS02915 PF07196 Flagellin hook IN motif AMJAP_RS02920 PF00158 Sigma-54 interaction domain AMJAP_RS02920 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS02920 PF06490 Flagellar regulatory protein FleQ AMJAP_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS02925 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS02925 PF13188 PAS domain AMJAP_RS02930 PF00072 Response regulator receiver domain AMJAP_RS02930 PF00158 Sigma-54 interaction domain AMJAP_RS02930 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS02935 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS02935 PF16177 Acetyl-coenzyme A synthetase N-terminus AMJAP_RS02935 PF00501 AMP-binding enzyme AMJAP_RS02940 PF00072 Response regulator receiver domain AMJAP_RS02940 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS02950 PF00072 Response regulator receiver domain AMJAP_RS02950 PF09456 RcsC Alpha-Beta-Loop (ABL) AMJAP_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS02950 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS02960 PF00474 Sodium:solute symporter family AMJAP_RS02970 PF11490 DNA polymerase III polC-type N-terminus II AMJAP_RS02970 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMJAP_RS02970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMJAP_RS02970 PF14579 Helix-hairpin-helix motif AMJAP_RS02970 PF02811 PHP domain AMJAP_RS02970 PF00929 Exonuclease AMJAP_RS02975 PF02049 Flagellar hook-basal body complex protein FliE AMJAP_RS02980 PF08345 Flagellar M-ring protein C-terminal AMJAP_RS02980 PF01514 Secretory protein of YscJ/FliF family AMJAP_RS02985 PF14841 FliG middle domain AMJAP_RS02985 PF14842 FliG N-terminal domain AMJAP_RS02985 PF01706 FliG C-terminal domain AMJAP_RS02995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMJAP_RS02995 PF18269 T3SS EscN ATPase C-terminal domain AMJAP_RS03005 PF02120 Flagellar hook-length control protein FliK AMJAP_RS03015 PF02154 Flagellar motor switch protein FliM AMJAP_RS03015 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMJAP_RS03020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMJAP_RS03025 PF04347 Flagellar biosynthesis protein, FliO AMJAP_RS03030 PF00813 FliP family AMJAP_RS03035 PF01313 Bacterial export proteins, family 3 AMJAP_RS03040 PF01311 Bacterial export proteins, family 1 AMJAP_RS03045 PF01312 FlhB HrpN YscU SpaS Family AMJAP_RS03050 PF00771 FHIPEP family AMJAP_RS03055 PF00448 SRP54-type protein, GTPase domain AMJAP_RS03060 PF10609 NUBPL iron-transfer P-loop NTPase AMJAP_RS03065 PF04542 Sigma-70 region 2 AMJAP_RS03065 PF04539 Sigma-70 region 3 AMJAP_RS03065 PF04545 Sigma-70, region 4 AMJAP_RS03070 PF00072 Response regulator receiver domain AMJAP_RS03075 PF04344 Chemotaxis phosphatase, CheZ AMJAP_RS03080 PF07194 P2 response regulator binding domain AMJAP_RS03080 PF01584 CheW-like domain AMJAP_RS03080 PF01627 Hpt domain AMJAP_RS03080 PF02895 Signal transducing histidine kinase, homodimeric domain AMJAP_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS03090 PF01618 MotA/TolQ/ExbB proton channel family AMJAP_RS03095 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMJAP_RS03095 PF00691 OmpA family AMJAP_RS03100 PF13614 AAA domain AMJAP_RS03115 PF01312 FlhB HrpN YscU SpaS Family AMJAP_RS03125 PF00005 ABC transporter AMJAP_RS03130 PF03379 CcmB protein AMJAP_RS03135 PF01578 Cytochrome C assembly protein AMJAP_RS03145 PF03100 CcmE AMJAP_RS03150 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMJAP_RS03150 PF01578 Cytochrome C assembly protein AMJAP_RS03155 PF08534 Redoxin AMJAP_RS03160 PF03918 Cytochrome C biogenesis protein AMJAP_RS03170 PF04354 ZipA, C-terminal FtsZ-binding domain AMJAP_RS03170 PF04354 ZipA, C-terminal FtsZ-binding domain AMJAP_RS03175 PF12826 Helix-hairpin-helix motif AMJAP_RS03175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMJAP_RS03175 PF00533 BRCA1 C Terminus (BRCT) domain AMJAP_RS03175 PF03120 NAD-dependent DNA ligase OB-fold domain AMJAP_RS03175 PF01653 NAD-dependent DNA ligase adenylation domain AMJAP_RS03185 PF06794 Uncharacterised protein family (UPF0270) AMJAP_RS03200 PF01266 FAD dependent oxidoreductase AMJAP_RS03200 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_RS03205 PF16363 GDP-mannose 4,6 dehydratase AMJAP_RS03210 PF01370 NAD dependent epimerase/dehydratase family AMJAP_RS03215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMJAP_RS03240 PF01531 Glycosyl transferase family 11 AMJAP_RS03245 PF01370 NAD dependent epimerase/dehydratase family AMJAP_RS03250 PF00535 Glycosyl transferase family 2 AMJAP_RS03255 PF00535 Glycosyl transferase family 2 AMJAP_RS03265 PF01370 NAD dependent epimerase/dehydratase family AMJAP_RS03270 PF02397 Bacterial sugar transferase AMJAP_RS03275 PF02719 Polysaccharide biosynthesis protein AMJAP_RS03285 PF04545 Sigma-70, region 4 AMJAP_RS03285 PF04539 Sigma-70 region 3 AMJAP_RS03285 PF04542 Sigma-70 region 2 AMJAP_RS03285 PF03979 Sigma-70 factor, region 1.1 AMJAP_RS03285 PF04546 Sigma-70, non-essential region AMJAP_RS03285 PF00140 Sigma-70 factor, region 1.2 AMJAP_RS03290 PF13662 Toprim domain AMJAP_RS03290 PF08278 DNA primase DnaG DnaB-binding AMJAP_RS03290 PF10410 DnaB-helicase binding domain of primase AMJAP_RS03290 PF08275 DNA primase catalytic core, N-terminal domain AMJAP_RS03290 PF01807 CHC2 zinc finger AMJAP_RS03300 PF01165 Ribosomal protein S21 AMJAP_RS03305 PF00814 Glycoprotease family AMJAP_RS03310 PF02660 Glycerol-3-phosphate acyltransferase AMJAP_RS03325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMJAP_RS03330 PF04011 LemA family AMJAP_RS03335 PF01435 Peptidase family M48 AMJAP_RS03345 PF01966 HD domain AMJAP_RS03345 PF01743 Poly A polymerase head domain AMJAP_RS03345 PF12627 Probable RNA and SrmB- binding site of polymerase A AMJAP_RS03350 PF00581 Rhodanese-like domain AMJAP_RS03355 PF00149 Calcineurin-like phosphoesterase AMJAP_RS03360 PF04379 ApaG domain AMJAP_RS03365 PF00398 Ribosomal RNA adenine dimethylase AMJAP_RS03370 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMJAP_RS03375 PF00639 PPIC-type PPIASE domain AMJAP_RS03375 PF09312 SurA N-terminal domain AMJAP_RS03380 PF04453 LPS transport system D AMJAP_RS03380 PF03968 OstA-like protein AMJAP_RS03385 PF01636 Phosphotransferase enzyme family AMJAP_RS03390 PF00483 Nucleotidyl transferase AMJAP_RS03395 PF05099 Tellurite resistance protein TerB AMJAP_RS03395 PF00226 DnaJ domain AMJAP_RS03405 PF00834 Ribulose-phosphate 3 epimerase family AMJAP_RS03410 PF13419 Haloacid dehalogenase-like hydrolase AMJAP_RS03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS03415 PF03466 LysR substrate binding domain AMJAP_RS03420 PF00425 chorismate binding enzyme AMJAP_RS03420 PF04715 Anthranilate synthase component I, N terminal region AMJAP_RS03430 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AMJAP_RS03430 PF08479 POTRA domain, ShlB-type AMJAP_RS03455 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMJAP_RS03465 PF05947 Type VI secretion system, TssF AMJAP_RS03475 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS03475 PF17871 AAA lid domain AMJAP_RS03475 PF10431 C-terminal, D2-small domain, of ClpB protein AMJAP_RS03475 PF07724 AAA domain (Cdc48 subfamily) AMJAP_RS03480 PF00158 Sigma-54 interaction domain AMJAP_RS03480 PF01590 GAF domain AMJAP_RS03480 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS03485 PF04717 Type VI secretion system, phage-baseplate injector AMJAP_RS03525 PF05638 Type VI secretion system effector, Hcp AMJAP_RS03535 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AMJAP_RS03545 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMJAP_RS03545 PF00691 OmpA family AMJAP_RS03550 PF06744 Type VI secretion protein IcmF C-terminal AMJAP_RS03550 PF14331 ImcF-related N-terminal domain AMJAP_RS03550 PF06761 Intracellular multiplication and human macrophage-killing AMJAP_RS03565 PF00069 Protein kinase domain AMJAP_RS03565 PF03793 PASTA domain AMJAP_RS03575 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMJAP_RS03575 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMJAP_RS03580 PF01047 MarR family AMJAP_RS03590 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS03595 PF00005 ABC transporter AMJAP_RS03595 PF00571 CBS domain AMJAP_RS03600 PF05675 Protein of unknown function (DUF817) AMJAP_RS03620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS03620 PF03466 LysR substrate binding domain AMJAP_RS03625 PF00171 Aldehyde dehydrogenase family AMJAP_RS03630 PF01244 Membrane dipeptidase (Peptidase family M19) AMJAP_RS03635 PF02028 BCCT, betaine/carnitine/choline family transporter AMJAP_RS03650 PF09905 DNA-binding protein VF530 AMJAP_RS03660 PF02152 Dihydroneopterin aldolase AMJAP_RS03700 PF00117 Glutamine amidotransferase class-I AMJAP_RS03705 PF02885 Glycosyl transferase family, helical bundle domain AMJAP_RS03705 PF00591 Glycosyl transferase family, a/b domain AMJAP_RS03710 PF00218 Indole-3-glycerol phosphate synthase AMJAP_RS03715 PF02566 OsmC-like protein AMJAP_RS03720 PF00857 Isochorismatase family AMJAP_RS03725 PF01965 DJ-1/PfpI family AMJAP_RS03725 PF12833 Helix-turn-helix domain AMJAP_RS03735 PF01250 Ribosomal protein S6 AMJAP_RS03740 PF01084 Ribosomal protein S18 AMJAP_RS03745 PF01281 Ribosomal protein L9, N-terminal domain AMJAP_RS03745 PF03948 Ribosomal protein L9, C-terminal domain AMJAP_RS03750 PF03796 DnaB-like helicase C terminal domain AMJAP_RS03750 PF00772 DnaB-like helicase N terminal domain AMJAP_RS03760 PF01209 ubiE/COQ5 methyltransferase family AMJAP_RS03775 PF00202 Aminotransferase class-III AMJAP_RS03785 PF01980 tRNA-methyltransferase O AMJAP_RS03785 PF18389 TrmO C-terminal domain AMJAP_RS03795 PF00156 Phosphoribosyl transferase domain AMJAP_RS03800 PF04055 Radical SAM superfamily AMJAP_RS03800 PF06968 Biotin and Thiamin Synthesis associated domain AMJAP_RS03805 PF00155 Aminotransferase class I and II AMJAP_RS03810 PF00561 alpha/beta hydrolase fold AMJAP_RS03815 PF12697 Alpha/beta hydrolase family AMJAP_RS03815 PF08241 Methyltransferase domain AMJAP_RS03850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMJAP_RS03850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMJAP_RS03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS03865 PF03466 LysR substrate binding domain AMJAP_RS03875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS03875 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMJAP_RS03880 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS03890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS03890 PF04324 BFD-like [2Fe-2S] binding domain AMJAP_RS03895 PF01266 FAD dependent oxidoreductase AMJAP_RS03900 PF01042 Endoribonuclease L-PSP AMJAP_RS03905 PF12697 Alpha/beta hydrolase family AMJAP_RS03910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMJAP_RS03910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS03920 PF13742 OB-fold nucleic acid binding domain AMJAP_RS03920 PF02601 Exonuclease VII, large subunit AMJAP_RS03925 PF00571 CBS domain AMJAP_RS03925 PF00478 IMP dehydrogenase / GMP reductase domain AMJAP_RS03930 PF00117 Glutamine amidotransferase class-I AMJAP_RS03930 PF02540 NAD synthase AMJAP_RS03930 PF00958 GMP synthase C terminal domain AMJAP_RS03935 PF01757 Acyltransferase family AMJAP_RS03940 PF01757 Acyltransferase family AMJAP_RS03945 PF14437 MafB19-like deaminase AMJAP_RS03950 PF00246 Zinc carboxypeptidase AMJAP_RS03955 PF01464 Transglycosylase SLT domain AMJAP_RS03955 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMJAP_RS03960 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AMJAP_RS03960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMJAP_RS03960 PF02769 AIR synthase related protein, C-terminal domain AMJAP_RS03975 PF00691 OmpA family AMJAP_RS03975 PF01389 OmpA-like transmembrane domain AMJAP_RS03980 PF03795 YCII-related domain AMJAP_RS03985 PF04279 Intracellular septation protein A AMJAP_RS03990 PF02811 PHP domain AMJAP_RS03995 PF01300 Telomere recombination AMJAP_RS04000 PF00816 H-NS histone family AMJAP_RS04005 PF00849 RNA pseudouridylate synthase AMJAP_RS04005 PF01479 S4 domain AMJAP_RS04010 PF00106 short chain dehydrogenase AMJAP_RS04015 PF13419 Haloacid dehalogenase-like hydrolase AMJAP_RS04025 PF00521 DNA gyrase/topoisomerase IV, subunit A AMJAP_RS04025 PF03989 DNA gyrase C-terminal domain, beta-propeller AMJAP_RS04030 PF00266 Aminotransferase class-V AMJAP_RS04035 PF00800 Prephenate dehydratase AMJAP_RS04035 PF01842 ACT domain AMJAP_RS04035 PF01817 Chorismate mutase type II AMJAP_RS04040 PF00155 Aminotransferase class I and II AMJAP_RS04045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMJAP_RS04050 PF02224 Cytidylate kinase AMJAP_RS04055 PF00575 S1 RNA binding domain AMJAP_RS04060 PF00216 Bacterial DNA-binding protein AMJAP_RS04070 PF18073 Rubredoxin metal binding domain AMJAP_RS04075 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMJAP_RS04090 PF02580 D-Tyr-tRNA(Tyr) deacylase AMJAP_RS04095 PF00561 alpha/beta hydrolase fold AMJAP_RS04100 PF00679 Elongation factor G C-terminus AMJAP_RS04100 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS04100 PF03144 Elongation factor Tu domain 2 AMJAP_RS04105 PF03951 Glutamine synthetase, beta-Grasp domain AMJAP_RS04105 PF00120 Glutamine synthetase, catalytic domain AMJAP_RS04115 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS04115 PF00989 PAS fold AMJAP_RS04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS04120 PF00158 Sigma-54 interaction domain AMJAP_RS04120 PF00072 Response regulator receiver domain AMJAP_RS04120 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS04125 PF00588 SpoU rRNA Methylase family AMJAP_RS04130 PF02556 Preprotein translocase subunit SecB AMJAP_RS04135 PF00462 Glutaredoxin AMJAP_RS04140 PF00581 Rhodanese-like domain AMJAP_RS04145 PF01676 Metalloenzyme superfamily AMJAP_RS04145 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMJAP_RS04150 PF01551 Peptidase family M23 AMJAP_RS04155 PF13180 PDZ domain AMJAP_RS04155 PF03572 Peptidase family S41 AMJAP_RS04170 PF00440 Bacterial regulatory proteins, tetR family AMJAP_RS04175 PF00696 Amino acid kinase family AMJAP_RS04180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMJAP_RS04180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMJAP_RS04180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMJAP_RS04180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMJAP_RS04185 PF00692 dUTPase AMJAP_RS04190 PF02441 Flavoprotein AMJAP_RS04190 PF04127 DNA / pantothenate metabolism flavoprotein AMJAP_RS04195 PF04002 RadC-like JAB domain AMJAP_RS04200 PF00830 Ribosomal L28 family AMJAP_RS04205 PF00471 Ribosomal protein L33 AMJAP_RS04210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMJAP_RS04210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMJAP_RS04210 PF06827 Zinc finger found in FPG and IleRS AMJAP_RS04220 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS04220 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS04220 PF00563 EAL domain AMJAP_RS04225 PF01569 PAP2 superfamily AMJAP_RS04235 PF08543 Phosphomethylpyrimidine kinase AMJAP_RS04240 PF13667 ThiC-associated domain AMJAP_RS04240 PF01964 Radical SAM ThiC family AMJAP_RS04260 PF00753 Metallo-beta-lactamase superfamily AMJAP_RS04275 PF03969 AFG1-like ATPase AMJAP_RS04280 PF03099 Biotin/lipoate A/B protein ligase family AMJAP_RS04285 PF00365 Phosphofructokinase AMJAP_RS04345 PF09997 Predicted membrane protein (DUF2238) AMJAP_RS04365 PF01565 FAD binding domain AMJAP_RS04365 PF02913 FAD linked oxidases, C-terminal domain AMJAP_RS04370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS04380 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS04385 PF07729 FCD domain AMJAP_RS04385 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS04390 PF17831 Pyruvate dehydrogenase E1 component middle domain AMJAP_RS04390 PF00456 Transketolase, thiamine diphosphate binding domain AMJAP_RS04395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMJAP_RS04395 PF02817 e3 binding domain AMJAP_RS04395 PF00364 Biotin-requiring enzyme AMJAP_RS04400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMJAP_RS04400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMJAP_RS04400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMJAP_RS04405 PF01370 NAD dependent epimerase/dehydratase family AMJAP_RS04410 PF10996 Beta-Casp domain AMJAP_RS04410 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMJAP_RS04410 PF00753 Metallo-beta-lactamase superfamily AMJAP_RS04430 PF02397 Bacterial sugar transferase AMJAP_RS04435 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMJAP_RS04440 PF00534 Glycosyl transferases group 1 AMJAP_RS04445 PF13439 Glycosyltransferase Family 4 AMJAP_RS04445 PF00534 Glycosyl transferases group 1 AMJAP_RS04475 PF01050 Mannose-6-phosphate isomerase AMJAP_RS04475 PF00483 Nucleotidyl transferase AMJAP_RS04480 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS04485 PF01507 Phosphoadenosine phosphosulfate reductase family AMJAP_RS04490 PF02080 TrkA-C domain AMJAP_RS04490 PF03600 Citrate transporter AMJAP_RS04495 PF00459 Inositol monophosphatase family AMJAP_RS04500 PF16363 GDP-mannose 4,6 dehydratase AMJAP_RS04515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMJAP_RS04515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMJAP_RS04515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMJAP_RS04515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMJAP_RS04525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMJAP_RS04525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMJAP_RS04525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMJAP_RS04530 PF00342 Phosphoglucose isomerase AMJAP_RS04535 PF00483 Nucleotidyl transferase AMJAP_RS04550 PF13614 AAA domain AMJAP_RS04565 PF00994 Probable molybdopterin binding domain AMJAP_RS04570 PF00994 Probable molybdopterin binding domain AMJAP_RS04570 PF03454 MoeA C-terminal region (domain IV) AMJAP_RS04570 PF03453 MoeA N-terminal region (domain I and II) AMJAP_RS04575 PF02597 ThiS family AMJAP_RS04580 PF12804 MobA-like NTP transferase domain AMJAP_RS04585 PF03788 LrgA family AMJAP_RS04590 PF04172 LrgB-like family AMJAP_RS04595 PF03969 AFG1-like ATPase AMJAP_RS04600 PF00572 Ribosomal protein L13 AMJAP_RS04605 PF00380 Ribosomal protein S9/S16 AMJAP_RS04610 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMJAP_RS04610 PF00355 Rieske [2Fe-2S] domain AMJAP_RS04615 PF00033 Cytochrome b/b6/petB AMJAP_RS04615 PF00032 Cytochrome b(C-terminal)/b6/petD AMJAP_RS04620 PF02167 Cytochrome C1 family AMJAP_RS04625 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS04625 PF00043 Glutathione S-transferase, C-terminal domain AMJAP_RS04630 PF04386 Stringent starvation protein B AMJAP_RS04635 PF04972 BON domain AMJAP_RS04640 PF13580 SIS domain AMJAP_RS04645 PF02021 Uncharacterised protein family UPF0102 AMJAP_RS04650 PF04348 LppC putative lipoprotein AMJAP_RS04655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMJAP_RS04685 PF02543 Carbamoyltransferase N-terminus AMJAP_RS04685 PF16861 Carbamoyltransferase C-terminus AMJAP_RS04695 PF02381 MraZ protein, putative antitoxin-like AMJAP_RS04700 PF01795 MraW methylase family AMJAP_RS04710 PF00905 Penicillin binding protein transpeptidase domain AMJAP_RS04710 PF03717 Penicillin-binding Protein dimerisation domain AMJAP_RS04715 PF08245 Mur ligase middle domain AMJAP_RS04715 PF02875 Mur ligase family, glutamate ligase domain AMJAP_RS04715 PF01225 Mur ligase family, catalytic domain AMJAP_RS04720 PF01225 Mur ligase family, catalytic domain AMJAP_RS04720 PF08245 Mur ligase middle domain AMJAP_RS04720 PF02875 Mur ligase family, glutamate ligase domain AMJAP_RS04725 PF00953 Glycosyl transferase family 4 AMJAP_RS04725 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMJAP_RS04730 PF02875 Mur ligase family, glutamate ligase domain AMJAP_RS04730 PF08245 Mur ligase middle domain AMJAP_RS04735 PF01098 Cell cycle protein AMJAP_RS04740 PF04101 Glycosyltransferase family 28 C-terminal domain AMJAP_RS04740 PF03033 Glycosyltransferase family 28 N-terminal domain AMJAP_RS04745 PF01225 Mur ligase family, catalytic domain AMJAP_RS04745 PF08245 Mur ligase middle domain AMJAP_RS04745 PF02875 Mur ligase family, glutamate ligase domain AMJAP_RS04750 PF01820 D-ala D-ala ligase N-terminus AMJAP_RS04750 PF07478 D-ala D-ala ligase C-terminus AMJAP_RS04755 PF03799 Cell division protein FtsQ AMJAP_RS04755 PF08478 POTRA domain, FtsQ-type AMJAP_RS04760 PF02491 SHS2 domain inserted in FTSA AMJAP_RS04765 PF12327 FtsZ family, C-terminal domain AMJAP_RS04765 PF00091 Tubulin/FtsZ family, GTPase domain AMJAP_RS04770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMJAP_RS04775 PF07517 SecA DEAD-like domain AMJAP_RS04775 PF01043 SecA preprotein cross-linking domain AMJAP_RS04775 PF07516 SecA Wing and Scaffold domain AMJAP_RS04775 PF02810 SEC-C motif AMJAP_RS04780 PF01960 ArgJ family AMJAP_RS04785 PF02581 Thiamine monophosphate synthase AMJAP_RS04790 PF03884 DNA gyrase inhibitor YacG AMJAP_RS04795 PF01121 Dephospho-CoA kinase AMJAP_RS04800 PF01478 Type IV leader peptidase family AMJAP_RS04800 PF06750 Bacterial Peptidase A24 N-terminal domain AMJAP_RS04805 PF00482 Type II secretion system (T2SS), protein F AMJAP_RS04810 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMJAP_RS04810 PF00437 Type II/IV secretion system protein AMJAP_RS04815 PF07963 Prokaryotic N-terminal methylation motif AMJAP_RS04815 PF00114 Pilin (bacterial filament) AMJAP_RS04825 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMJAP_RS04825 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMJAP_RS04830 PF01510 N-acetylmuramoyl-L-alanine amidase AMJAP_RS04835 PF17113 Regulatory signalling modulator protein AmpE AMJAP_RS04840 PF08402 TOBE domain AMJAP_RS04840 PF00005 ABC transporter AMJAP_RS04845 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS04850 PF13416 Bacterial extracellular solute-binding protein AMJAP_RS04860 PF01554 MatE AMJAP_RS04865 PF00106 short chain dehydrogenase AMJAP_RS04875 PF02810 SEC-C motif AMJAP_RS04880 PF00929 Exonuclease AMJAP_RS04880 PF08411 Exonuclease C-terminal AMJAP_RS04890 PF00675 Insulinase (Peptidase family M16) AMJAP_RS04890 PF05193 Peptidase M16 inactive domain AMJAP_RS04900 PF02080 TrkA-C domain AMJAP_RS04900 PF02254 TrkA-N domain AMJAP_RS04905 PF00892 EamA-like transporter family AMJAP_RS04915 PF03883 Peroxide stress protein YaaA AMJAP_RS04925 PF00579 tRNA synthetases class I (W and Y) AMJAP_RS04930 PF00581 Rhodanese-like domain AMJAP_RS04935 PF04237 YjbR AMJAP_RS04940 PF04261 Dyp-type peroxidase family AMJAP_RS04950 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS04970 PF00793 DAHP synthetase I family AMJAP_RS04980 PF01243 Pyridoxamine 5'-phosphate oxidase AMJAP_RS05025 PF02867 Ribonucleotide reductase, barrel domain AMJAP_RS05025 PF03477 ATP cone domain AMJAP_RS05025 PF00317 Ribonucleotide reductase, all-alpha domain AMJAP_RS05030 PF00268 Ribonucleotide reductase, small chain AMJAP_RS05035 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS05045 PF09905 DNA-binding protein VF530 AMJAP_RS05055 PF00730 HhH-GPD superfamily base excision DNA repair protein AMJAP_RS05055 PF10576 Iron-sulfur binding domain of endonuclease III AMJAP_RS05055 PF00633 Helix-hairpin-helix motif AMJAP_RS05070 PF02508 Rnf-Nqr subunit, membrane protein AMJAP_RS05075 PF04205 FMN-binding domain AMJAP_RS05080 PF03116 NQR2, RnfD, RnfE family AMJAP_RS05085 PF13375 RnfC Barrel sandwich hybrid domain AMJAP_RS05085 PF10531 SLBB domain AMJAP_RS05085 PF12838 4Fe-4S dicluster domain AMJAP_RS05085 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMJAP_RS05090 PF04060 Putative Fe-S cluster AMJAP_RS05095 PF02508 Rnf-Nqr subunit, membrane protein AMJAP_RS05100 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS05105 PF01507 Phosphoadenosine phosphosulfate reductase family AMJAP_RS05110 PF01925 Sulfite exporter TauE/SafE AMJAP_RS05115 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMJAP_RS05115 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMJAP_RS05125 PF01507 Phosphoadenosine phosphosulfate reductase family AMJAP_RS05130 PF14824 Sirohaem biosynthesis protein central AMJAP_RS05130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMJAP_RS05130 PF10414 Sirohaem synthase dimerisation region AMJAP_RS05145 PF00561 alpha/beta hydrolase fold AMJAP_RS05150 PF01541 GIY-YIG catalytic domain AMJAP_RS05160 PF01979 Amidohydrolase family AMJAP_RS05165 PF17763 Glutaminase/Asparaginase C-terminal domain AMJAP_RS05165 PF00710 Asparaginase, N-terminal AMJAP_RS05180 PF01636 Phosphotransferase enzyme family AMJAP_RS05185 PF04893 Yip1 domain AMJAP_RS05190 PF01177 Asp/Glu/Hydantoin racemase AMJAP_RS05195 PF17151 Periplasmic sensor domain AMJAP_RS05195 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS05200 PF00768 D-alanyl-D-alanine carboxypeptidase AMJAP_RS05210 PF00155 Aminotransferase class I and II AMJAP_RS05215 PF00795 Carbon-nitrogen hydrolase AMJAP_RS05235 PF08482 ATP-dependent helicase C-terminal AMJAP_RS05235 PF04408 Helicase associated domain (HA2) AMJAP_RS05235 PF00271 Helicase conserved C-terminal domain AMJAP_RS05235 PF00270 DEAD/DEAH box helicase AMJAP_RS05240 PF13419 Haloacid dehalogenase-like hydrolase AMJAP_RS05245 PF17954 Quercetinase C-terminal cupin domain AMJAP_RS05245 PF02678 Pirin AMJAP_RS05255 PF01645 Conserved region in glutamate synthase AMJAP_RS05260 PF02678 Pirin AMJAP_RS05260 PF05726 Pirin C-terminal cupin domain AMJAP_RS05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS05265 PF03466 LysR substrate binding domain AMJAP_RS05270 PF13409 Glutathione S-transferase, N-terminal domain AMJAP_RS05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS05295 PF03466 LysR substrate binding domain AMJAP_RS05320 PF01479 S4 domain AMJAP_RS05320 PF00849 RNA pseudouridylate synthase AMJAP_RS05340 PF00800 Prephenate dehydratase AMJAP_RS05340 PF01817 Chorismate mutase type II AMJAP_RS05345 PF12105 SpoU, rRNA methylase, C-terminal AMJAP_RS05345 PF00588 SpoU rRNA Methylase family AMJAP_RS05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS05350 PF02743 Cache domain AMJAP_RS05350 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS05355 PF00158 Sigma-54 interaction domain AMJAP_RS05355 PF00072 Response regulator receiver domain AMJAP_RS05355 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS05385 PF00534 Glycosyl transferases group 1 AMJAP_RS05385 PF13579 Glycosyl transferase 4-like domain AMJAP_RS05395 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS05400 PF00682 HMGL-like AMJAP_RS05400 PF08502 LeuA allosteric (dimerisation) domain AMJAP_RS05405 PF00795 Carbon-nitrogen hydrolase AMJAP_RS05415 PF01638 HxlR-like helix-turn-helix AMJAP_RS05420 PF00270 DEAD/DEAH box helicase AMJAP_RS05420 PF00271 Helicase conserved C-terminal domain AMJAP_RS05425 PF12137 RNA polymerase recycling family C-terminal AMJAP_RS05425 PF18337 RapA N-terminal Tudor like domain AMJAP_RS05425 PF18339 RapA N-terminal Tudor like domain 1 AMJAP_RS05425 PF00176 SNF2 family N-terminal domain AMJAP_RS05425 PF00271 Helicase conserved C-terminal domain AMJAP_RS05430 PF00271 Helicase conserved C-terminal domain AMJAP_RS05430 PF00270 DEAD/DEAH box helicase AMJAP_RS05435 PF00034 Cytochrome c AMJAP_RS05440 PF00563 EAL domain AMJAP_RS05440 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS05440 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS05450 PF12801 4Fe-4S binding domain AMJAP_RS05450 PF04205 FMN-binding domain AMJAP_RS05455 PF18793 Nitrous oxide reductase propeller repeat 2 AMJAP_RS05455 PF18764 Nitrous oxide reductase propeller repeat AMJAP_RS05460 PF05048 Periplasmic copper-binding protein (NosD) AMJAP_RS05465 PF00005 ABC transporter AMJAP_RS05470 PF12679 ABC-2 family transporter protein AMJAP_RS05475 PF05573 NosL AMJAP_RS05490 PF12848 ABC transporter AMJAP_RS05490 PF00005 ABC transporter AMJAP_RS05500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS05510 PF08448 PAS fold AMJAP_RS05510 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS05520 PF00027 Cyclic nucleotide-binding domain AMJAP_RS05520 PF00520 Ion transport protein AMJAP_RS05555 PF04989 Cephalosporin hydroxylase AMJAP_RS05570 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS05585 PF12169 DNA polymerase III subunits gamma and tau domain III AMJAP_RS05585 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMJAP_RS05585 PF12170 DNA polymerase III tau subunit V interacting with alpha AMJAP_RS05590 PF02575 YbaB/EbfC DNA-binding family AMJAP_RS05595 PF13662 Toprim domain AMJAP_RS05595 PF02132 RecR protein AMJAP_RS05600 PF01612 3'-5' exonuclease AMJAP_RS05600 PF00570 HRDC domain AMJAP_RS05605 PF05166 YcgL domain AMJAP_RS05610 PF03692 Putative zinc- or iron-chelating domain AMJAP_RS05625 PF03572 Peptidase family S41 AMJAP_RS05625 PF17804 Tail specific protease N-terminal domain AMJAP_RS05625 PF00595 PDZ domain AMJAP_RS05625 PF11818 C-terminal domain of tail specific protease (DUF3340) AMJAP_RS05630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMJAP_RS05630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS05635 PF02127 Aminopeptidase I zinc metalloprotease (M18) AMJAP_RS05640 PF00849 RNA pseudouridylate synthase AMJAP_RS05640 PF01479 S4 domain AMJAP_RS05645 PF02810 SEC-C motif AMJAP_RS05645 PF07517 SecA DEAD-like domain AMJAP_RS05645 PF01043 SecA preprotein cross-linking domain AMJAP_RS05645 PF07516 SecA Wing and Scaffold domain AMJAP_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS05675 PF00005 ABC transporter AMJAP_RS05675 PF03459 TOBE domain AMJAP_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS05695 PF08402 TOBE domain AMJAP_RS05695 PF00005 ABC transporter AMJAP_RS05700 PF17876 Cold shock domain AMJAP_RS05700 PF08206 Ribonuclease B OB domain AMJAP_RS05700 PF00773 RNB domain AMJAP_RS05700 PF08461 Ribonuclease R winged-helix domain AMJAP_RS05700 PF00575 S1 RNA binding domain AMJAP_RS05705 PF00360 Phytochrome region AMJAP_RS05705 PF00563 EAL domain AMJAP_RS05705 PF01590 GAF domain AMJAP_RS05705 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS05710 PF07976 Phenol hydroxylase, C-terminal dimerisation domain AMJAP_RS05710 PF01494 FAD binding domain AMJAP_RS05725 PF04116 Fatty acid hydroxylase superfamily AMJAP_RS05785 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AMJAP_RS05785 PF18381 YcaO cyclodehydratase C-terminal domain AMJAP_RS05820 PF01722 BolA-like protein AMJAP_RS05830 PF00664 ABC transporter transmembrane region AMJAP_RS05830 PF00005 ABC transporter AMJAP_RS05835 PF05433 Glycine zipper 2TM domain AMJAP_RS05845 PF16124 RecQ zinc-binding AMJAP_RS05845 PF00570 HRDC domain AMJAP_RS05845 PF09382 RQC domain AMJAP_RS05845 PF00270 DEAD/DEAH box helicase AMJAP_RS05845 PF00271 Helicase conserved C-terminal domain AMJAP_RS05875 PF00005 ABC transporter AMJAP_RS05875 PF00664 ABC transporter transmembrane region AMJAP_RS05875 PF03412 Peptidase C39 family AMJAP_RS05880 PF00529 HlyD membrane-fusion protein of T1SS AMJAP_RS05880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMJAP_RS05885 PF02321 Outer membrane efflux protein AMJAP_RS05890 PF01171 PP-loop family AMJAP_RS05900 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS05910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMJAP_RS05940 PF02872 5'-nucleotidase, C-terminal domain AMJAP_RS05940 PF00149 Calcineurin-like phosphoesterase AMJAP_RS05950 PF04315 Elongation factor P hydroxylase AMJAP_RS05960 PF02630 SCO1/SenC AMJAP_RS05970 PF01966 HD domain AMJAP_RS05975 PF01253 Translation initiation factor SUI1 AMJAP_RS05995 PF01636 Phosphotransferase enzyme family AMJAP_RS06000 PF01928 CYTH domain AMJAP_RS06005 PF01588 Putative tRNA binding domain AMJAP_RS06005 PF09334 tRNA synthetases class I (M) AMJAP_RS06015 PF05958 tRNA (Uracil-5-)-methyltransferase AMJAP_RS06020 PF01553 Acyltransferase AMJAP_RS06020 PF00501 AMP-binding enzyme AMJAP_RS06025 PF03976 Polyphosphate kinase 2 (PPK2) AMJAP_RS06040 PF00005 ABC transporter AMJAP_RS06055 PF10609 NUBPL iron-transfer P-loop NTPase AMJAP_RS06060 PF00692 dUTPase AMJAP_RS06075 PF00563 EAL domain AMJAP_RS06075 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06075 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS06075 PF13188 PAS domain AMJAP_RS06085 PF02321 Outer membrane efflux protein AMJAP_RS06090 PF00873 AcrB/AcrD/AcrF family AMJAP_RS06095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMJAP_RS06100 PF00440 Bacterial regulatory proteins, tetR family AMJAP_RS06100 PF16925 Tetracyclin repressor-like, C-terminal domain AMJAP_RS06105 PF00155 Aminotransferase class I and II AMJAP_RS06110 PF17757 UvrB interaction domain AMJAP_RS06110 PF00271 Helicase conserved C-terminal domain AMJAP_RS06110 PF02151 UvrB/uvrC motif AMJAP_RS06110 PF04851 Type III restriction enzyme, res subunit AMJAP_RS06110 PF12344 Ultra-violet resistance protein B AMJAP_RS06115 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMJAP_RS06115 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS06125 PF00072 Response regulator receiver domain AMJAP_RS06130 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS06130 PF00072 Response regulator receiver domain AMJAP_RS06130 PF00158 Sigma-54 interaction domain AMJAP_RS06135 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS06135 PF00158 Sigma-54 interaction domain AMJAP_RS06135 PF00072 Response regulator receiver domain AMJAP_RS06160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMJAP_RS06160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMJAP_RS06170 PF02311 AraC-like ligand binding domain AMJAP_RS06170 PF12833 Helix-turn-helix domain AMJAP_RS06180 PF12833 Helix-turn-helix domain AMJAP_RS06190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMJAP_RS06200 PF04909 Amidohydrolase AMJAP_RS06205 PF04303 PrpF protein AMJAP_RS06210 PF03737 Aldolase/RraA AMJAP_RS06215 PF04909 Amidohydrolase AMJAP_RS06220 PF03466 LysR substrate binding domain AMJAP_RS06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS06225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMJAP_RS06230 PF00248 Aldo/keto reductase family AMJAP_RS06235 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS06245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS06260 PF01494 FAD binding domain AMJAP_RS06265 PF03466 LysR substrate binding domain AMJAP_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS06290 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS06295 PF03466 LysR substrate binding domain AMJAP_RS06300 PF00106 short chain dehydrogenase AMJAP_RS06305 PF01323 DSBA-like thioredoxin domain AMJAP_RS06310 PF03334 Na+/H+ antiporter subunit AMJAP_RS06315 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AMJAP_RS06320 PF01899 Na+/H+ ion antiporter subunit AMJAP_RS06325 PF00361 Proton-conducting membrane transporter AMJAP_RS06330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMJAP_RS06335 PF00361 Proton-conducting membrane transporter AMJAP_RS06335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMJAP_RS06335 PF13244 Domain of unknown function (DUF4040) AMJAP_RS06335 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMJAP_RS06345 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06370 PF00072 Response regulator receiver domain AMJAP_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS06370 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS06370 PF09308 LuxQ, periplasmic AMJAP_RS06375 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06375 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS06375 PF00563 EAL domain AMJAP_RS06390 PF12706 Beta-lactamase superfamily domain AMJAP_RS06395 PF00211 Adenylate and Guanylate cyclase catalytic domain AMJAP_RS06400 PF01966 HD domain AMJAP_RS06415 PF12833 Helix-turn-helix domain AMJAP_RS06415 PF01965 DJ-1/PfpI family AMJAP_RS06420 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMJAP_RS06425 PF01266 FAD dependent oxidoreductase AMJAP_RS06470 PF00892 EamA-like transporter family AMJAP_RS06475 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS06480 PF05088 Bacterial NAD-glutamate dehydrogenase AMJAP_RS06485 PF00474 Sodium:solute symporter family AMJAP_RS06490 PF00171 Aldehyde dehydrogenase family AMJAP_RS06490 PF14850 DNA-binding domain of Proline dehydrogenase AMJAP_RS06490 PF01619 Proline dehydrogenase AMJAP_RS06490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMJAP_RS06495 PF00563 EAL domain AMJAP_RS06495 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06495 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS06505 PF01022 Bacterial regulatory protein, arsR family AMJAP_RS06520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMJAP_RS06520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMJAP_RS06535 PF04226 Transglycosylase associated protein AMJAP_RS06545 PF07308 Protein of unknown function (DUF1456) AMJAP_RS06560 PF02567 Phenazine biosynthesis-like protein AMJAP_RS06565 PF12833 Helix-turn-helix domain AMJAP_RS06565 PF02311 AraC-like ligand binding domain AMJAP_RS06580 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06580 PF07694 5TMR of 5TMR-LYT AMJAP_RS06595 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS06595 PF07729 FCD domain AMJAP_RS06600 PF08943 CsiD AMJAP_RS06605 PF01266 FAD dependent oxidoreductase AMJAP_RS06610 PF03466 LysR substrate binding domain AMJAP_RS06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS06615 PF03401 Tripartite tricarboxylate transporter family receptor AMJAP_RS06620 PF01970 Tripartite tricarboxylate transporter TctA family AMJAP_RS06630 PF01042 Endoribonuclease L-PSP AMJAP_RS06635 PF01266 FAD dependent oxidoreductase AMJAP_RS06645 PF00892 EamA-like transporter family AMJAP_RS06650 PF00551 Formyl transferase AMJAP_RS06660 PF00689 Cation transporting ATPase, C-terminus AMJAP_RS06660 PF00690 Cation transporter/ATPase, N-terminus AMJAP_RS06670 PF00877 NlpC/P60 family AMJAP_RS06680 PF04231 Endonuclease I AMJAP_RS06685 PF11849 Domain of unknown function (DUF3369) AMJAP_RS06690 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS06690 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06690 PF00563 EAL domain AMJAP_RS06695 PF00005 ABC transporter AMJAP_RS06695 PF00664 ABC transporter transmembrane region AMJAP_RS06700 PF03649 Uncharacterised protein family (UPF0014) AMJAP_RS06705 PF00892 EamA-like transporter family AMJAP_RS06710 PF01810 LysE type translocator AMJAP_RS06715 PF03060 Nitronate monooxygenase AMJAP_RS06720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS06725 PF07726 ATPase family associated with various cellular activities (AAA) AMJAP_RS06725 PF17863 AAA lid domain AMJAP_RS06735 PF11992 Domain of unknown function (DUF3488) AMJAP_RS06735 PF13559 Domain of unknown function (DUF4129) AMJAP_RS06735 PF01841 Transglutaminase-like superfamily AMJAP_RS06745 PF12729 Four helix bundle sensory module for signal transduction AMJAP_RS06745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS06745 PF00672 HAMP domain AMJAP_RS06760 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS06760 PF00072 Response regulator receiver domain AMJAP_RS06760 PF09456 RcsC Alpha-Beta-Loop (ABL) AMJAP_RS06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS06765 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS06765 PF00072 Response regulator receiver domain AMJAP_RS06775 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS06775 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06775 PF00563 EAL domain AMJAP_RS06785 PF00005 ABC transporter AMJAP_RS06810 PF00072 Response regulator receiver domain AMJAP_RS06810 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS06815 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS06815 PF00672 HAMP domain AMJAP_RS06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS06820 PF06629 MltA-interacting protein MipA AMJAP_RS06830 PF00873 AcrB/AcrD/AcrF family AMJAP_RS06835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMJAP_RS06860 PF01011 PQQ enzyme repeat AMJAP_RS06860 PF13360 PQQ-like domain AMJAP_RS06875 PF07694 5TMR of 5TMR-LYT AMJAP_RS06875 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS06880 PF03466 LysR substrate binding domain AMJAP_RS06885 PF01810 LysE type translocator AMJAP_RS06890 PF08447 PAS fold AMJAP_RS06890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS06895 PF00171 Aldehyde dehydrogenase family AMJAP_RS06900 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS06900 PF00563 EAL domain AMJAP_RS06900 PF13426 PAS domain AMJAP_RS06910 PF00472 RF-1 domain AMJAP_RS06920 PF08042 PqqA family AMJAP_RS06925 PF12706 Beta-lactamase superfamily domain AMJAP_RS06930 PF03070 TENA/THI-4/PQQC family AMJAP_RS06935 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AMJAP_RS06940 PF13186 Iron-sulfur cluster-binding domain AMJAP_RS06940 PF04055 Radical SAM superfamily AMJAP_RS06945 PF00326 Prolyl oligopeptidase family AMJAP_RS06950 PF08274 PhnA Zinc-Ribbon AMJAP_RS06950 PF03831 PhnA domain AMJAP_RS06955 PF13495 Phage integrase, N-terminal SAM-like domain AMJAP_RS06955 PF00589 Phage integrase family AMJAP_RS07015 PF00561 alpha/beta hydrolase fold AMJAP_RS07025 PF03475 3-alpha domain AMJAP_RS07025 PF03473 MOSC domain AMJAP_RS07055 PF02036 SCP-2 sterol transfer family AMJAP_RS07060 PF01136 Peptidase family U32 AMJAP_RS07065 PF01136 Peptidase family U32 AMJAP_RS07075 PF01613 Flavin reductase like domain AMJAP_RS07120 PF07726 ATPase family associated with various cellular activities (AAA) AMJAP_RS07120 PF17863 AAA lid domain AMJAP_RS07135 PF00892 EamA-like transporter family AMJAP_RS07150 PF00677 Lumazine binding domain AMJAP_RS07155 PF01370 NAD dependent epimerase/dehydratase family AMJAP_RS07155 PF08338 Domain of unknown function (DUF1731) AMJAP_RS07165 PF05088 Bacterial NAD-glutamate dehydrogenase AMJAP_RS07175 PF01180 Dihydroorotate dehydrogenase AMJAP_RS07180 PF04957 Ribosome modulation factor AMJAP_RS07185 PF01170 Putative RNA methylase family UPF0020 AMJAP_RS07185 PF02926 THUMP domain AMJAP_RS07185 PF10672 S-adenosylmethionine-dependent methyltransferase AMJAP_RS07190 PF00909 Ammonium Transporter Family AMJAP_RS07195 PF00285 Citrate synthase, C-terminal domain AMJAP_RS07200 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMJAP_RS07205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMJAP_RS07210 PF02910 Fumarate reductase flavoprotein C-term AMJAP_RS07210 PF00890 FAD binding domain AMJAP_RS07215 PF13085 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS07220 PF16870 2-oxoglutarate dehydrogenase C-terminal AMJAP_RS07220 PF00676 Dehydrogenase E1 component AMJAP_RS07220 PF16078 2-oxoglutarate dehydrogenase N-terminus AMJAP_RS07220 PF02779 Transketolase, pyrimidine binding domain AMJAP_RS07225 PF00364 Biotin-requiring enzyme AMJAP_RS07225 PF02817 e3 binding domain AMJAP_RS07225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMJAP_RS07230 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS07230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_RS07235 PF00549 CoA-ligase AMJAP_RS07235 PF08442 ATP-grasp domain AMJAP_RS07240 PF00549 CoA-ligase AMJAP_RS07240 PF02629 CoA binding domain AMJAP_RS07270 PF01810 LysE type translocator AMJAP_RS07280 PF03880 DbpA RNA binding domain AMJAP_RS07280 PF00271 Helicase conserved C-terminal domain AMJAP_RS07280 PF00270 DEAD/DEAH box helicase AMJAP_RS07280 PF12343 Cold shock protein DEAD box A AMJAP_RS07290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMJAP_RS07295 PF07885 Ion channel AMJAP_RS07315 PF00551 Formyl transferase AMJAP_RS07320 PF00586 AIR synthase related protein, N-terminal domain AMJAP_RS07320 PF02769 AIR synthase related protein, C-terminal domain AMJAP_RS07330 PF01594 AI-2E family transporter AMJAP_RS07335 PF00308 Bacterial dnaA protein AMJAP_RS07345 PF00849 RNA pseudouridylate synthase AMJAP_RS07355 PF00899 ThiF family AMJAP_RS07360 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS07365 PF00266 Aminotransferase class-V AMJAP_RS07375 PF03358 NADPH-dependent FMN reductase AMJAP_RS07380 PF03960 ArsC family AMJAP_RS07385 PF03631 Virulence factor BrkB AMJAP_RS07390 PF00708 Acylphosphatase AMJAP_RS07400 PF03992 Antibiotic biosynthesis monooxygenase AMJAP_RS07410 PF04073 Aminoacyl-tRNA editing domain AMJAP_RS07410 PF03129 Anticodon binding domain AMJAP_RS07410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMJAP_RS07430 PF00924 Mechanosensitive ion channel AMJAP_RS07430 PF05552 Conserved TM helix AMJAP_RS07440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS07440 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS07440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS07445 PF02515 CoA-transferase family III AMJAP_RS07450 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS07450 PF00501 AMP-binding enzyme AMJAP_RS07475 PF00034 Cytochrome c AMJAP_RS07500 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS07500 PF00072 Response regulator receiver domain AMJAP_RS07505 PF00989 PAS fold AMJAP_RS07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS07505 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS07510 PF00501 AMP-binding enzyme AMJAP_RS07510 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS07520 PF01435 Peptidase family M48 AMJAP_RS07525 PF01206 Sulfurtransferase TusA AMJAP_RS07530 PF01594 AI-2E family transporter AMJAP_RS07535 PF00578 AhpC/TSA family AMJAP_RS07540 PF00701 Dihydrodipicolinate synthetase family AMJAP_RS07550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMJAP_RS07550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMJAP_RS07555 PF00849 RNA pseudouridylate synthase AMJAP_RS07560 PF05958 tRNA (Uracil-5-)-methyltransferase AMJAP_RS07565 PF00591 Glycosyl transferase family, a/b domain AMJAP_RS07565 PF02885 Glycosyl transferase family, helical bundle domain AMJAP_RS07570 PF00999 Sodium/hydrogen exchanger family AMJAP_RS07570 PF02254 TrkA-N domain AMJAP_RS07575 PF01521 Iron-sulphur cluster biosynthesis AMJAP_RS07575 PF01106 NifU-like domain AMJAP_RS07580 PF05362 Lon protease (S16) C-terminal proteolytic domain AMJAP_RS07580 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS07580 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMJAP_RS07585 PF00216 Bacterial DNA-binding protein AMJAP_RS07595 PF00639 PPIC-type PPIASE domain AMJAP_RS07595 PF09312 SurA N-terminal domain AMJAP_RS07625 PF00005 ABC transporter AMJAP_RS07625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMJAP_RS07630 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS07630 PF12911 N-terminal TM domain of oligopeptide transport permease C AMJAP_RS07635 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS07640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMJAP_RS07650 PF01476 LysM domain AMJAP_RS07650 PF01464 Transglycosylase SLT domain AMJAP_RS07655 PF00753 Metallo-beta-lactamase superfamily AMJAP_RS07655 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMJAP_RS07660 PF01209 ubiE/COQ5 methyltransferase family AMJAP_RS07665 PF00075 RNase H AMJAP_RS07670 PF00929 Exonuclease AMJAP_RS07675 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AMJAP_RS07680 PF09297 NADH pyrophosphatase zinc ribbon domain AMJAP_RS07680 PF00293 NUDIX domain AMJAP_RS07680 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AMJAP_RS07690 PF01343 Peptidase family S49 AMJAP_RS07690 PF08496 Peptidase family S49 N-terminal AMJAP_RS07700 PF17969 L,D-transpeptidase C-terminal domain AMJAP_RS07700 PF03734 L,D-transpeptidase catalytic domain AMJAP_RS07705 PF00933 Glycosyl hydrolase family 3 N terminal domain AMJAP_RS07710 PF00924 Mechanosensitive ion channel AMJAP_RS07725 PF02559 CarD-like/TRCF domain AMJAP_RS07725 PF00270 DEAD/DEAH box helicase AMJAP_RS07725 PF00271 Helicase conserved C-terminal domain AMJAP_RS07725 PF17757 UvrB interaction domain AMJAP_RS07725 PF03461 TRCF domain AMJAP_RS07730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMJAP_RS07730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMJAP_RS07735 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AMJAP_RS07735 PF11973 NQRA C-terminal domain AMJAP_RS07740 PF03116 NQR2, RnfD, RnfE family AMJAP_RS07745 PF04205 FMN-binding domain AMJAP_RS07750 PF02508 Rnf-Nqr subunit, membrane protein AMJAP_RS07755 PF02508 Rnf-Nqr subunit, membrane protein AMJAP_RS07760 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS07760 PF00970 Oxidoreductase FAD-binding domain AMJAP_RS07760 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS07765 PF02424 ApbE family AMJAP_RS07775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_RS07775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS07795 PF02687 FtsX-like permease family AMJAP_RS07795 PF12704 MacB-like periplasmic core domain AMJAP_RS07800 PF00005 ABC transporter AMJAP_RS07810 PF00753 Metallo-beta-lactamase superfamily AMJAP_RS07810 PF03772 Competence protein AMJAP_RS07815 PF01618 MotA/TolQ/ExbB proton channel family AMJAP_RS07820 PF02472 Biopolymer transport protein ExbD/TolR AMJAP_RS07825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMJAP_RS07830 PF03966 Trm112p-like protein AMJAP_RS07835 PF02348 Cytidylyltransferase AMJAP_RS07855 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMJAP_RS07860 PF01565 FAD binding domain AMJAP_RS07860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMJAP_RS07865 PF00575 S1 RNA binding domain AMJAP_RS07865 PF10150 Ribonuclease E/G family AMJAP_RS07865 PF12111 Polyribonucleotide phosphorylase C terminal AMJAP_RS07870 PF01479 S4 domain AMJAP_RS07870 PF00849 RNA pseudouridylate synthase AMJAP_RS07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS07880 PF03466 LysR substrate binding domain AMJAP_RS07895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS07900 PF00582 Universal stress protein family AMJAP_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS07905 PF03466 LysR substrate binding domain AMJAP_RS07910 PF00563 EAL domain AMJAP_RS07910 PF08668 HDOD domain AMJAP_RS07915 PF01926 50S ribosome-binding GTPase AMJAP_RS07940 PF03264 NapC/NirT cytochrome c family, N-terminal region AMJAP_RS07945 PF00012 Hsp70 protein AMJAP_RS07950 PF03466 LysR substrate binding domain AMJAP_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS07965 PF03334 Na+/H+ antiporter subunit AMJAP_RS07975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMJAP_RS07980 PF00361 Proton-conducting membrane transporter AMJAP_RS07985 PF00361 Proton-conducting membrane transporter AMJAP_RS07995 PF13244 Domain of unknown function (DUF4040) AMJAP_RS07995 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMJAP_RS07995 PF00361 Proton-conducting membrane transporter AMJAP_RS07995 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMJAP_RS08005 PF18381 YcaO cyclodehydratase C-terminal domain AMJAP_RS08005 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AMJAP_RS08015 PF03928 Haem-degrading AMJAP_RS08025 PF07498 Rho termination factor, N-terminal domain AMJAP_RS08025 PF07497 Rho termination factor, RNA-binding domain AMJAP_RS08025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMJAP_RS08040 PF00270 DEAD/DEAH box helicase AMJAP_RS08040 PF00271 Helicase conserved C-terminal domain AMJAP_RS08055 PF04960 Glutaminase AMJAP_RS08070 PF00120 Glutamine synthetase, catalytic domain AMJAP_RS08070 PF12437 Glutamine synthetase type III N terminal AMJAP_RS08070 PF18318 Glutamine synthetase C-terminal domain AMJAP_RS08075 PF03600 Citrate transporter AMJAP_RS08080 PF00171 Aldehyde dehydrogenase family AMJAP_RS08095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_RS08095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS08095 PF00403 Heavy-metal-associated domain AMJAP_RS08100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMJAP_RS08100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMJAP_RS08125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS08125 PF05697 Bacterial trigger factor protein (TF) AMJAP_RS08125 PF05698 Bacterial trigger factor protein (TF) C-terminus AMJAP_RS08130 PF00574 Clp protease AMJAP_RS08135 PF07724 AAA domain (Cdc48 subfamily) AMJAP_RS08135 PF10431 C-terminal, D2-small domain, of ClpB protein AMJAP_RS08135 PF06689 ClpX C4-type zinc finger AMJAP_RS08140 PF01709 Transcriptional regulator AMJAP_RS08150 PF05230 MASE2 domain AMJAP_RS08150 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS08160 PF04828 Glutathione-dependent formaldehyde-activating enzyme AMJAP_RS08210 PF01259 SAICAR synthetase AMJAP_RS08215 PF07690 Major Facilitator Superfamily AMJAP_RS08220 PF03618 Kinase/pyrophosphorylase AMJAP_RS08225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMJAP_RS08225 PF02896 PEP-utilising enzyme, TIM barrel domain AMJAP_RS08225 PF00391 PEP-utilising enzyme, mobile domain AMJAP_RS08230 PF01479 S4 domain AMJAP_RS08230 PF00849 RNA pseudouridylate synthase AMJAP_RS08235 PF00535 Glycosyl transferase family 2 AMJAP_RS08275 PF01863 Protein of unknown function DUF45 AMJAP_RS08285 PF03061 Thioesterase superfamily AMJAP_RS08295 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS08295 PF00155 Aminotransferase class I and II AMJAP_RS08300 PF12833 Helix-turn-helix domain AMJAP_RS08315 PF02080 TrkA-C domain AMJAP_RS08315 PF03600 Citrate transporter AMJAP_RS08320 PF03061 Thioesterase superfamily AMJAP_RS08325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS08325 PF03466 LysR substrate binding domain AMJAP_RS08330 PF13183 4Fe-4S dicluster domain AMJAP_RS08330 PF01565 FAD binding domain AMJAP_RS08330 PF02913 FAD linked oxidases, C-terminal domain AMJAP_RS08345 PF03737 Aldolase/RraA AMJAP_RS08350 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS08350 PF10518 TAT (twin-arginine translocation) pathway signal sequence AMJAP_RS08350 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AMJAP_RS08360 PF13419 Haloacid dehalogenase-like hydrolase AMJAP_RS08365 PF01343 Peptidase family S49 AMJAP_RS08375 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AMJAP_RS08380 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AMJAP_RS08385 PF02545 Maf-like protein AMJAP_RS08390 PF02620 Large ribosomal RNA subunit accumulation protein YceD AMJAP_RS08395 PF01783 Ribosomal L32p protein family AMJAP_RS08400 PF02504 Fatty acid synthesis protein AMJAP_RS08405 PF00698 Acyl transferase domain AMJAP_RS08415 PF00550 Phosphopantetheine attachment site AMJAP_RS08420 PF00109 Beta-ketoacyl synthase, N-terminal domain AMJAP_RS08420 PF02801 Beta-ketoacyl synthase, C-terminal domain AMJAP_RS08425 PF01063 Amino-transferase class IV AMJAP_RS08430 PF02618 YceG-like family AMJAP_RS08435 PF02223 Thymidylate kinase AMJAP_RS08440 PF09115 DNA polymerase III, delta subunit, C terminal AMJAP_RS08450 PF01026 TatD related DNase AMJAP_RS08460 PF00056 lactate/malate dehydrogenase, NAD binding domain AMJAP_RS08460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMJAP_RS08465 PF01894 Uncharacterised protein family UPF0047 AMJAP_RS08470 PF01584 CheW-like domain AMJAP_RS08475 PF01261 Xylose isomerase-like TIM barrel AMJAP_RS08480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMJAP_RS08480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMJAP_RS08485 PF04358 DsrC like protein AMJAP_RS08490 PF04077 DsrH like protein AMJAP_RS08495 PF02635 DsrE/DsrF-like family AMJAP_RS08500 PF02635 DsrE/DsrF-like family AMJAP_RS08505 PF01027 Inhibitor of apoptosis-promoting Bax1 AMJAP_RS08510 PF00849 RNA pseudouridylate synthase AMJAP_RS08520 PF01048 Phosphorylase superfamily AMJAP_RS08525 PF00266 Aminotransferase class-V AMJAP_RS08530 PF00578 AhpC/TSA family AMJAP_RS08535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMJAP_RS08535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMJAP_RS08555 PF01541 GIY-YIG catalytic domain AMJAP_RS08555 PF08459 UvrC Helix-hairpin-helix N-terminal AMJAP_RS08555 PF02151 UvrB/uvrC motif AMJAP_RS08560 PF01066 CDP-alcohol phosphatidyltransferase AMJAP_RS08585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMJAP_RS08585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMJAP_RS08600 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS08600 PF00072 Response regulator receiver domain AMJAP_RS08665 PF00501 AMP-binding enzyme AMJAP_RS08665 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS08675 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS08675 PF00989 PAS fold AMJAP_RS08685 PF01738 Dienelactone hydrolase family AMJAP_RS08690 PF07311 Dodecin AMJAP_RS08695 PF00717 Peptidase S24-like AMJAP_RS08700 PF00817 impB/mucB/samB family AMJAP_RS08700 PF11799 impB/mucB/samB family C-terminal domain AMJAP_RS08700 PF11798 IMS family HHH motif AMJAP_RS08700 PF13438 Domain of unknown function (DUF4113) AMJAP_RS08710 PF02163 Peptidase family M50 AMJAP_RS08710 PF17820 PDZ domain AMJAP_RS08720 PF00563 EAL domain AMJAP_RS08720 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS08720 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS08725 PF00106 short chain dehydrogenase AMJAP_RS08740 PF06628 Catalase-related immune-responsive AMJAP_RS08740 PF00199 Catalase AMJAP_RS08750 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS08750 PF00501 AMP-binding enzyme AMJAP_RS08750 PF16177 Acetyl-coenzyme A synthetase N-terminus AMJAP_RS08755 PF02261 Aspartate decarboxylase AMJAP_RS08760 PF02607 B12 binding domain AMJAP_RS08760 PF02574 Homocysteine S-methyltransferase AMJAP_RS08760 PF02310 B12 binding domain AMJAP_RS08760 PF00809 Pterin binding enzyme AMJAP_RS08760 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMJAP_RS08775 PF00912 Transglycosylase AMJAP_RS08790 PF05193 Peptidase M16 inactive domain AMJAP_RS08790 PF00675 Insulinase (Peptidase family M16) AMJAP_RS08790 PF08367 Peptidase M16C associated AMJAP_RS08800 PF01494 FAD binding domain AMJAP_RS08805 PF00563 EAL domain AMJAP_RS08805 PF08668 HDOD domain AMJAP_RS08810 PF02403 Seryl-tRNA synthetase N-terminal domain AMJAP_RS08810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMJAP_RS08815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMJAP_RS08820 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS08820 PF16193 AAA C-terminal domain AMJAP_RS08820 PF12002 MgsA AAA+ ATPase C terminal AMJAP_RS08825 PF03548 Outer membrane lipoprotein carrier protein LolA AMJAP_RS08830 PF17854 FtsK alpha domain AMJAP_RS08830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMJAP_RS08830 PF09397 Ftsk gamma domain AMJAP_RS08830 PF01580 FtsK/SpoIIIE family AMJAP_RS08835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS08840 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMJAP_RS08845 PF04376 Arginine-tRNA-protein transferase, N terminus AMJAP_RS08845 PF04377 Arginine-tRNA-protein transferase, C terminus AMJAP_RS08850 PF01176 Translation initiation factor 1A / IF-1 AMJAP_RS08855 PF02861 Clp amino terminal domain, pathogenicity island component AMJAP_RS08855 PF17871 AAA lid domain AMJAP_RS08855 PF07724 AAA domain (Cdc48 subfamily) AMJAP_RS08855 PF10431 C-terminal, D2-small domain, of ClpB protein AMJAP_RS08855 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS08860 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMJAP_RS08865 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS08870 PF00849 RNA pseudouridylate synthase AMJAP_RS08875 PF02391 MoaE protein AMJAP_RS08880 PF00293 NUDIX domain AMJAP_RS08890 PF04356 Protein of unknown function (DUF489) AMJAP_RS08895 PF00206 Lyase AMJAP_RS08895 PF08328 Adenylosuccinate lyase C-terminal AMJAP_RS08900 PF00561 alpha/beta hydrolase fold AMJAP_RS08905 PF00588 SpoU rRNA Methylase family AMJAP_RS08910 PF08007 Cupin superfamily protein AMJAP_RS08915 PF03466 LysR substrate binding domain AMJAP_RS08915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS08920 PF00463 Isocitrate lyase family AMJAP_RS08930 PF00463 Isocitrate lyase family AMJAP_RS08935 PF06779 Uncharacterised MFS-type transporter YbfB AMJAP_RS08940 PF03922 OmpW family AMJAP_RS08950 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS08955 PF00664 ABC transporter transmembrane region AMJAP_RS08955 PF00005 ABC transporter AMJAP_RS08975 PF01406 tRNA synthetases class I (C) catalytic domain AMJAP_RS08975 PF09190 DALR domain AMJAP_RS08980 PF10371 Domain of unknown function AMJAP_RS08980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMJAP_RS08980 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AMJAP_RS08980 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AMJAP_RS08980 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AMJAP_RS08990 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AMJAP_RS08990 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMJAP_RS08995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMJAP_RS09000 PF00149 Calcineurin-like phosphoesterase AMJAP_RS09005 PF14552 Tautomerase enzyme AMJAP_RS09020 PF00583 Acetyltransferase (GNAT) family AMJAP_RS09025 PF02254 TrkA-N domain AMJAP_RS09025 PF00999 Sodium/hydrogen exchanger family AMJAP_RS09035 PF03466 LysR substrate binding domain AMJAP_RS09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS09040 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS09040 PF00107 Zinc-binding dehydrogenase AMJAP_RS09055 PF04303 PrpF protein AMJAP_RS09060 PF00330 Aconitase family (aconitate hydratase) AMJAP_RS09060 PF00694 Aconitase C-terminal domain AMJAP_RS09065 PF00285 Citrate synthase, C-terminal domain AMJAP_RS09075 PF07729 FCD domain AMJAP_RS09075 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS09085 PF04715 Anthranilate synthase component I, N terminal region AMJAP_RS09085 PF00425 chorismate binding enzyme AMJAP_RS09120 PF03942 DTW domain AMJAP_RS09125 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS09125 PF00563 EAL domain AMJAP_RS09125 PF00498 FHA domain AMJAP_RS09135 PF03591 AzlC protein AMJAP_RS09155 PF07690 Major Facilitator Superfamily AMJAP_RS09165 PF03466 LysR substrate binding domain AMJAP_RS09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS09170 PF01144 Coenzyme A transferase AMJAP_RS09175 PF01144 Coenzyme A transferase AMJAP_RS09180 PF13458 Periplasmic binding protein AMJAP_RS09185 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS09185 PF17151 Periplasmic sensor domain AMJAP_RS09195 PF11412 Disulphide bond corrector protein DsbC AMJAP_RS09195 PF02683 Cytochrome C biogenesis protein transmembrane region AMJAP_RS09200 PF00793 DAHP synthetase I family AMJAP_RS09205 PF03971 Monomeric isocitrate dehydrogenase AMJAP_RS09210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS09220 PF08447 PAS fold AMJAP_RS09220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS09250 PF00330 Aconitase family (aconitate hydratase) AMJAP_RS09250 PF06434 Aconitate hydratase 2 N-terminus AMJAP_RS09250 PF11791 Aconitate B N-terminal domain AMJAP_RS09255 PF00330 Aconitase family (aconitate hydratase) AMJAP_RS09255 PF00694 Aconitase C-terminal domain AMJAP_RS09265 PF00563 EAL domain AMJAP_RS09265 PF13426 PAS domain AMJAP_RS09265 PF08448 PAS fold AMJAP_RS09265 PF08447 PAS fold AMJAP_RS09265 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS09265 PF05231 MASE1 AMJAP_RS09270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS09275 PF02311 AraC-like ligand binding domain AMJAP_RS09275 PF12833 Helix-turn-helix domain AMJAP_RS09280 PF01613 Flavin reductase like domain AMJAP_RS09290 PF00011 Hsp20/alpha crystallin family AMJAP_RS09295 PF01661 Macro domain AMJAP_RS09310 PF01875 Memo-like protein AMJAP_RS09320 PF01207 Dihydrouridine synthase (Dus) AMJAP_RS09325 PF01053 Cys/Met metabolism PLP-dependent enzyme AMJAP_RS09330 PF00156 Phosphoribosyl transferase domain AMJAP_RS09335 PF02674 Colicin V production protein AMJAP_RS09345 PF08245 Mur ligase middle domain AMJAP_RS09350 PF17848 Acetyl-coA carboxylase zinc finger domain AMJAP_RS09350 PF01039 Carboxyl transferase domain AMJAP_RS09355 PF00290 Tryptophan synthase alpha chain AMJAP_RS09360 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS09365 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMJAP_RS09370 PF01416 tRNA pseudouridine synthase AMJAP_RS09380 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMJAP_RS09380 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMJAP_RS09385 PF00180 Isocitrate/isopropylmalate dehydrogenase AMJAP_RS09390 PF00694 Aconitase C-terminal domain AMJAP_RS09395 PF00330 Aconitase family (aconitate hydratase) AMJAP_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS09410 PF00561 alpha/beta hydrolase fold AMJAP_RS09415 PF02675 S-adenosylmethionine decarboxylase AMJAP_RS09445 PF05233 PHB accumulation regulatory domain AMJAP_RS09445 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMJAP_RS09455 PF12832 MFS_1 like family AMJAP_RS09460 PF17284 Spermidine synthase tetramerisation domain AMJAP_RS09465 PF01264 Chorismate synthase AMJAP_RS09470 PF05175 Methyltransferase small domain AMJAP_RS09480 PF01227 GTP cyclohydrolase I AMJAP_RS09485 PF01734 Patatin-like phospholipase AMJAP_RS09510 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMJAP_RS09510 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMJAP_RS09515 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMJAP_RS09520 PF00270 DEAD/DEAH box helicase AMJAP_RS09520 PF00271 Helicase conserved C-terminal domain AMJAP_RS09525 PF13307 Helicase C-terminal domain AMJAP_RS09525 PF06733 DEAD_2 AMJAP_RS09530 PF00717 Peptidase S24-like AMJAP_RS09530 PF01726 LexA DNA binding domain AMJAP_RS09535 PF03846 Cell division inhibitor SulA AMJAP_RS09550 PF01396 Topoisomerase DNA binding C4 zinc finger AMJAP_RS09550 PF08272 Topoisomerase I zinc-ribbon-like AMJAP_RS09550 PF01131 DNA topoisomerase AMJAP_RS09550 PF01751 Toprim domain AMJAP_RS09570 PF00582 Universal stress protein family AMJAP_RS09575 PF00005 ABC transporter AMJAP_RS09575 PF12848 ABC transporter AMJAP_RS09575 PF16326 ABC transporter C-terminal domain AMJAP_RS09580 PF14718 Soluble lytic murein transglycosylase L domain AMJAP_RS09580 PF01464 Transglycosylase SLT domain AMJAP_RS09585 PF01026 TatD related DNase AMJAP_RS09595 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AMJAP_RS09600 PF01554 MatE AMJAP_RS09615 PF00563 EAL domain AMJAP_RS09615 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS09615 PF08495 FIST N domain AMJAP_RS09615 PF10442 FIST C domain AMJAP_RS09625 PF01206 Sulfurtransferase TusA AMJAP_RS09635 PF18125 RlmM ferredoxin-like domain AMJAP_RS09635 PF01728 FtsJ-like methyltransferase AMJAP_RS09645 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMJAP_RS09660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AMJAP_RS09660 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AMJAP_RS09665 PF13746 4Fe-4S dicluster domain AMJAP_RS09665 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMJAP_RS09665 PF12801 4Fe-4S binding domain AMJAP_RS09675 PF00403 Heavy-metal-associated domain AMJAP_RS09690 PF04055 Radical SAM superfamily AMJAP_RS09690 PF06969 HemN C-terminal domain AMJAP_RS09695 PF13545 Crp-like helix-turn-helix domain AMJAP_RS09695 PF00027 Cyclic nucleotide-binding domain AMJAP_RS09700 PF00156 Phosphoribosyl transferase domain AMJAP_RS09715 PF04381 Putative exonuclease, RdgC AMJAP_RS09730 PF01758 Sodium Bile acid symporter family AMJAP_RS09735 PF01545 Cation efflux family AMJAP_RS09735 PF16916 Dimerisation domain of Zinc Transporter AMJAP_RS09740 PF01205 Uncharacterized protein family UPF0029 AMJAP_RS09740 PF09186 Domain of unknown function (DUF1949) AMJAP_RS09745 PF01740 STAS domain AMJAP_RS09745 PF00916 Sulfate permease family AMJAP_RS09750 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS09755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS09755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_RS09760 PF03372 Endonuclease/Exonuclease/phosphatase family AMJAP_RS09770 PF00581 Rhodanese-like domain AMJAP_RS09770 PF11127 Protein of unknown function (DUF2892) AMJAP_RS09775 PF00072 Response regulator receiver domain AMJAP_RS09775 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS09800 PF01022 Bacterial regulatory protein, arsR family AMJAP_RS09805 PF00583 Acetyltransferase (GNAT) family AMJAP_RS09805 PF13607 Succinyl-CoA ligase like flavodoxin domain AMJAP_RS09805 PF13380 CoA binding domain AMJAP_RS09830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMJAP_RS09830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMJAP_RS09830 PF11890 Domain of unknown function (DUF3410) AMJAP_RS09840 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS09870 PF01751 Toprim domain AMJAP_RS09870 PF01131 DNA topoisomerase AMJAP_RS09890 PF00462 Glutaredoxin AMJAP_RS09895 PF13538 UvrD-like helicase C-terminal domain AMJAP_RS09900 PF12705 PD-(D/E)XK nuclease superfamily AMJAP_RS09900 PF00580 UvrD/REP helicase N-terminal domain AMJAP_RS09900 PF13361 UvrD-like helicase C-terminal domain AMJAP_RS09905 PF17946 RecC C-terminal domain AMJAP_RS09915 PF07690 Major Facilitator Superfamily AMJAP_RS09930 PF01575 MaoC like domain AMJAP_RS09935 PF02445 Quinolinate synthetase A protein AMJAP_RS09940 PF06508 Queuosine biosynthesis protein QueC AMJAP_RS09950 PF00691 OmpA family AMJAP_RS09955 PF07676 WD40-like Beta Propeller Repeat AMJAP_RS09955 PF04052 TolB amino-terminal domain AMJAP_RS09965 PF02472 Biopolymer transport protein ExbD/TolR AMJAP_RS09970 PF01618 MotA/TolQ/ExbB proton channel family AMJAP_RS09980 PF05491 RuvB C-terminal winged helix domain AMJAP_RS09980 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMJAP_RS09980 PF17864 RuvB AAA lid domain AMJAP_RS09985 PF01330 RuvA N terminal domain AMJAP_RS09985 PF07499 RuvA, C-terminal domain AMJAP_RS09990 PF03458 UPF0126 domain AMJAP_RS09995 PF02075 Crossover junction endodeoxyribonuclease RuvC AMJAP_RS10000 PF02938 GAD domain AMJAP_RS10000 PF01336 OB-fold nucleic acid binding domain AMJAP_RS10000 PF00152 tRNA synthetases class II (D, K and N) AMJAP_RS10030 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS10055 PF11940 Domain of unknown function (DUF3458) Ig-like fold AMJAP_RS10055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AMJAP_RS10055 PF01433 Peptidase family M1 domain AMJAP_RS10065 PF07023 Protein of unknown function (DUF1315) AMJAP_RS10070 PF01694 Rhomboid family AMJAP_RS10070 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AMJAP_RS10075 PF00149 Calcineurin-like phosphoesterase AMJAP_RS10080 PF01513 ATP-NAD kinase AMJAP_RS10090 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS10135 PF07348 Syd protein (SUKH-2) AMJAP_RS10150 PF01641 SelR domain AMJAP_RS10155 PF00155 Aminotransferase class I and II AMJAP_RS10165 PF08668 HDOD domain AMJAP_RS10175 PF17785 PUA-like domain AMJAP_RS10175 PF10672 S-adenosylmethionine-dependent methyltransferase AMJAP_RS10180 PF01435 Peptidase family M48 AMJAP_RS10195 PF11842 Domain of unknown function (DUF3362) AMJAP_RS10195 PF08497 Radical SAM N-terminal AMJAP_RS10195 PF04055 Radical SAM superfamily AMJAP_RS10220 PF07152 YaeQ protein AMJAP_RS10225 PF03692 Putative zinc- or iron-chelating domain AMJAP_RS10250 PF00155 Aminotransferase class I and II AMJAP_RS10260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS10260 PF03466 LysR substrate binding domain AMJAP_RS10285 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMJAP_RS10285 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMJAP_RS10300 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS10300 PF00155 Aminotransferase class I and II AMJAP_RS10310 PF05971 RNA methyltransferase AMJAP_RS10325 PF01047 MarR family AMJAP_RS10330 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMJAP_RS10335 PF00171 Aldehyde dehydrogenase family AMJAP_RS10340 PF07690 Major Facilitator Superfamily AMJAP_RS10355 PF06906 Protein of unknown function (DUF1272) AMJAP_RS10365 PF00924 Mechanosensitive ion channel AMJAP_RS10365 PF05552 Conserved TM helix AMJAP_RS10380 PF00171 Aldehyde dehydrogenase family AMJAP_RS10385 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMJAP_RS10390 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMJAP_RS10395 PF03328 HpcH/HpaI aldolase/citrate lyase family AMJAP_RS10400 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMJAP_RS10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS10425 PF00183 Hsp90 protein AMJAP_RS10445 PF10672 S-adenosylmethionine-dependent methyltransferase AMJAP_RS10445 PF17785 PUA-like domain AMJAP_RS10465 PF06039 Malate:quinone oxidoreductase (Mqo) AMJAP_RS10470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS10470 PF17200 Single Cache domain 2 AMJAP_RS10470 PF00672 HAMP domain AMJAP_RS10475 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AMJAP_RS10475 PF12241 Trans-2-enoyl-CoA reductase catalytic region AMJAP_RS10475 PF07055 Enoyl reductase FAD binding domain AMJAP_RS10480 PF16199 Radical_SAM C-terminal domain AMJAP_RS10480 PF04055 Radical SAM superfamily AMJAP_RS10485 PF07977 FabA-like domain AMJAP_RS10490 PF00501 AMP-binding enzyme AMJAP_RS10490 PF16177 Acetyl-coenzyme A synthetase N-terminus AMJAP_RS10490 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS10495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMJAP_RS10495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMJAP_RS10500 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS10505 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS10510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS10510 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS10510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS10515 PF00171 Aldehyde dehydrogenase family AMJAP_RS10525 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AMJAP_RS10530 PF02311 AraC-like ligand binding domain AMJAP_RS10530 PF12833 Helix-turn-helix domain AMJAP_RS10535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMJAP_RS10540 PF13404 AsnC-type helix-turn-helix domain AMJAP_RS10540 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS10545 PF13520 Amino acid permease AMJAP_RS10560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMJAP_RS10565 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMJAP_RS10575 PF08218 Citrate lyase ligase C-terminal domain AMJAP_RS10580 PF00108 Thiolase, N-terminal domain AMJAP_RS10580 PF02803 Thiolase, C-terminal domain AMJAP_RS10590 PF02653 Branched-chain amino acid transport system / permease component AMJAP_RS10600 PF00005 ABC transporter AMJAP_RS10605 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMJAP_RS10605 PF00005 ABC transporter AMJAP_RS10615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS10615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS10615 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS10620 PF01039 Carboxyl transferase domain AMJAP_RS10625 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS10630 PF02785 Biotin carboxylase C-terminal domain AMJAP_RS10630 PF18140 Propionyl-coenzyme A carboxylase BT domain AMJAP_RS10630 PF00289 Biotin carboxylase, N-terminal domain AMJAP_RS10630 PF00364 Biotin-requiring enzyme AMJAP_RS10630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMJAP_RS10635 PF00682 HMGL-like AMJAP_RS10645 PF00501 AMP-binding enzyme AMJAP_RS10645 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS10650 PF01209 ubiE/COQ5 methyltransferase family AMJAP_RS10655 PF00270 DEAD/DEAH box helicase AMJAP_RS10655 PF00271 Helicase conserved C-terminal domain AMJAP_RS10660 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMJAP_RS10660 PF02558 Ketopantoate reductase PanE/ApbA AMJAP_RS10670 PF01925 Sulfite exporter TauE/SafE AMJAP_RS10675 PF01740 STAS domain AMJAP_RS10675 PF00916 Sulfate permease family AMJAP_RS10680 PF01171 PP-loop family AMJAP_RS10680 PF11734 TilS substrate C-terminal domain AMJAP_RS10680 PF14437 MafB19-like deaminase AMJAP_RS10685 PF00817 impB/mucB/samB family AMJAP_RS10685 PF11798 IMS family HHH motif AMJAP_RS10710 PF01556 DnaJ C terminal domain AMJAP_RS10710 PF00226 DnaJ domain AMJAP_RS10710 PF00684 DnaJ central domain AMJAP_RS10720 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMJAP_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS10730 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS10740 PF00158 Sigma-54 interaction domain AMJAP_RS10740 PF00072 Response regulator receiver domain AMJAP_RS10745 PF04073 Aminoacyl-tRNA editing domain AMJAP_RS10760 PF03466 LysR substrate binding domain AMJAP_RS10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS10765 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS10765 PF00043 Glutathione S-transferase, C-terminal domain AMJAP_RS10770 PF12843 Putative quorum-sensing-regulated virulence factor AMJAP_RS10780 PF17176 tRNA-binding domain AMJAP_RS10780 PF05127 Helicase AMJAP_RS10780 PF08351 Domain of unknown function (DUF1726) AMJAP_RS10780 PF13718 GNAT acetyltransferase 2 AMJAP_RS10785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMJAP_RS10785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMJAP_RS10805 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS10805 PF00043 Glutathione S-transferase, C-terminal domain AMJAP_RS10815 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMJAP_RS10825 PF08668 HDOD domain AMJAP_RS10825 PF00563 EAL domain AMJAP_RS10835 PF07286 Protein of unknown function (DUF1445) AMJAP_RS10840 PF03746 LamB/YcsF family AMJAP_RS10845 PF02682 Carboxyltransferase domain, subdomain C and D AMJAP_RS10850 PF02626 Carboxyltransferase domain, subdomain A and B AMJAP_RS10860 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS10865 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS10865 PF13404 AsnC-type helix-turn-helix domain AMJAP_RS10870 PF03466 LysR substrate binding domain AMJAP_RS10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS10875 PF01063 Amino-transferase class IV AMJAP_RS10890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMJAP_RS10905 PF13649 Methyltransferase domain AMJAP_RS10915 PF00570 HRDC domain AMJAP_RS10915 PF16124 RecQ zinc-binding AMJAP_RS10915 PF00271 Helicase conserved C-terminal domain AMJAP_RS10915 PF09382 RQC domain AMJAP_RS10915 PF00270 DEAD/DEAH box helicase AMJAP_RS10920 PF00202 Aminotransferase class-III AMJAP_RS10925 PF00171 Aldehyde dehydrogenase family AMJAP_RS10930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS10930 PF03466 LysR substrate binding domain AMJAP_RS10935 PF00582 Universal stress protein family AMJAP_RS10940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS10950 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS10955 PF03466 LysR substrate binding domain AMJAP_RS10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS10960 PF01266 FAD dependent oxidoreductase AMJAP_RS10965 PF03553 Na+/H+ antiporter family AMJAP_RS10970 PF00892 EamA-like transporter family AMJAP_RS10980 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS10990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS10990 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMJAP_RS11000 PF01068 ATP dependent DNA ligase domain AMJAP_RS11000 PF14743 DNA ligase OB-like domain AMJAP_RS11005 PF00171 Aldehyde dehydrogenase family AMJAP_RS11010 PF00202 Aminotransferase class-III AMJAP_RS11015 PF03466 LysR substrate binding domain AMJAP_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11035 PF13409 Glutathione S-transferase, N-terminal domain AMJAP_RS11050 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS11055 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS11060 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS11070 PF03466 LysR substrate binding domain AMJAP_RS11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11075 PF02540 NAD synthase AMJAP_RS11075 PF00117 Glutamine amidotransferase class-I AMJAP_RS11075 PF00958 GMP synthase C terminal domain AMJAP_RS11080 PF02540 NAD synthase AMJAP_RS11080 PF00958 GMP synthase C terminal domain AMJAP_RS11080 PF00117 Glutamine amidotransferase class-I AMJAP_RS11085 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS11090 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS11095 PF08402 TOBE domain AMJAP_RS11095 PF00005 ABC transporter AMJAP_RS11100 PF13416 Bacterial extracellular solute-binding protein AMJAP_RS11105 PF00120 Glutamine synthetase, catalytic domain AMJAP_RS11115 PF00202 Aminotransferase class-III AMJAP_RS11130 PF00171 Aldehyde dehydrogenase family AMJAP_RS11140 PF01810 LysE type translocator AMJAP_RS11145 PF00072 Response regulator receiver domain AMJAP_RS11155 PF00155 Aminotransferase class I and II AMJAP_RS11155 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS11160 PF00491 Arginase family AMJAP_RS11165 PF03466 LysR substrate binding domain AMJAP_RS11165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11170 PF00893 Small Multidrug Resistance protein AMJAP_RS11195 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS11195 PF00072 Response regulator receiver domain AMJAP_RS11205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS11215 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS11220 PF07085 DRTGG domain AMJAP_RS11220 PF01515 Phosphate acetyl/butaryl transferase AMJAP_RS11225 PF08349 Protein of unknown function (DUF1722) AMJAP_RS11230 PF00875 DNA photolyase AMJAP_RS11230 PF03441 FAD binding domain of DNA photolyase AMJAP_RS11235 PF01471 Putative peptidoglycan binding domain AMJAP_RS11235 PF13401 AAA domain AMJAP_RS11250 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS11285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AMJAP_RS11285 PF00437 Type II/IV secretion system protein AMJAP_RS11290 PF00482 Type II secretion system (T2SS), protein F AMJAP_RS11295 PF07963 Prokaryotic N-terminal methylation motif AMJAP_RS11295 PF08334 Type II secretion system (T2SS), protein G AMJAP_RS11315 PF03934 Type II secretion system (T2SS), protein K AMJAP_RS11320 PF00989 PAS fold AMJAP_RS11320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS11320 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS11320 PF08447 PAS fold AMJAP_RS11325 PF00158 Sigma-54 interaction domain AMJAP_RS11325 PF00072 Response regulator receiver domain AMJAP_RS11325 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS11330 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS11330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS11330 PF00989 PAS fold AMJAP_RS11340 PF02630 SCO1/SenC AMJAP_RS11375 PF05922 Peptidase inhibitor I9 AMJAP_RS11375 PF00082 Subtilase family AMJAP_RS11395 PF03958 Bacterial type II/III secretion system short domain AMJAP_RS11395 PF00263 Bacterial type II and III secretion system protein AMJAP_RS11405 PF12973 ChrR Cupin-like domain AMJAP_RS11410 PF04545 Sigma-70, region 4 AMJAP_RS11410 PF04542 Sigma-70 region 2 AMJAP_RS11415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS11415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMJAP_RS11465 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS11465 PF14497 Glutathione S-transferase, C-terminal domain AMJAP_RS11480 PF03466 LysR substrate binding domain AMJAP_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11490 PF07848 PaaX-like protein AMJAP_RS11490 PF08223 PaaX-like protein C-terminal domain AMJAP_RS11495 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS11500 PF00171 Aldehyde dehydrogenase family AMJAP_RS11505 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS11510 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS11515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMJAP_RS11515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMJAP_RS11515 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AMJAP_RS11520 PF03061 Thioesterase superfamily AMJAP_RS11525 PF02803 Thiolase, C-terminal domain AMJAP_RS11525 PF00108 Thiolase, N-terminal domain AMJAP_RS11530 PF00501 AMP-binding enzyme AMJAP_RS11530 PF14535 AMP-binding enzyme C-terminal domain AMJAP_RS11535 PF05138 Phenylacetic acid catabolic protein AMJAP_RS11540 PF06243 Phenylacetic acid degradation B AMJAP_RS11545 PF05138 Phenylacetic acid catabolic protein AMJAP_RS11550 PF01883 Iron-sulfur cluster assembly protein AMJAP_RS11555 PF00970 Oxidoreductase FAD-binding domain AMJAP_RS11555 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS11555 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS11560 PF01575 MaoC like domain AMJAP_RS11560 PF00171 Aldehyde dehydrogenase family AMJAP_RS11565 PF04317 YcjX-like family, DUF463 AMJAP_RS11605 PF11867 Domain of unknown function (DUF3387) AMJAP_RS11605 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMJAP_RS11605 PF18766 SWI2/SNF2 ATPase AMJAP_RS11620 PF12161 HsdM N-terminal domain AMJAP_RS11620 PF02384 N-6 DNA Methylase AMJAP_RS11630 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMJAP_RS11635 PF00072 Response regulator receiver domain AMJAP_RS11640 PF00005 ABC transporter AMJAP_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS11655 PF00005 ABC transporter AMJAP_RS11660 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMJAP_RS11660 PF04324 BFD-like [2Fe-2S] binding domain AMJAP_RS11660 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS11660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMJAP_RS11660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMJAP_RS11665 PF04324 BFD-like [2Fe-2S] binding domain AMJAP_RS11665 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMJAP_RS11665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMJAP_RS11665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMJAP_RS11665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS11670 PF13806 Rieske-like [2Fe-2S] domain AMJAP_RS11675 PF00384 Molybdopterin oxidoreductase AMJAP_RS11675 PF01568 Molydopterin dinucleotide binding domain AMJAP_RS11675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMJAP_RS11675 PF04324 BFD-like [2Fe-2S] binding domain AMJAP_RS11680 PF01219 Prokaryotic diacylglycerol kinase AMJAP_RS11695 PF01207 Dihydrouridine synthase (Dus) AMJAP_RS11700 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMJAP_RS11705 PF04333 MlaA lipoprotein AMJAP_RS11710 PF13609 Gram-negative porin AMJAP_RS11715 PF00271 Helicase conserved C-terminal domain AMJAP_RS11715 PF11898 Domain of unknown function (DUF3418) AMJAP_RS11715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AMJAP_RS11715 PF00270 DEAD/DEAH box helicase AMJAP_RS11715 PF04408 Helicase associated domain (HA2) AMJAP_RS11720 PF13230 Glutamine amidotransferases class-II AMJAP_RS11730 PF01551 Peptidase family M23 AMJAP_RS11730 PF04225 Opacity-associated protein A LysM-like domain AMJAP_RS11740 PF03547 Membrane transport protein AMJAP_RS11745 PF02803 Thiolase, C-terminal domain AMJAP_RS11745 PF00108 Thiolase, N-terminal domain AMJAP_RS11750 PF01619 Proline dehydrogenase AMJAP_RS11750 PF14850 DNA-binding domain of Proline dehydrogenase AMJAP_RS11750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMJAP_RS11750 PF00171 Aldehyde dehydrogenase family AMJAP_RS11755 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AMJAP_RS11755 PF03641 Possible lysine decarboxylase AMJAP_RS11755 PF11892 Domain of unknown function (DUF3412) AMJAP_RS11760 PF02146 Sir2 family AMJAP_RS11765 PF02562 PhoH-like protein AMJAP_RS11765 PF13638 PIN domain AMJAP_RS11770 PF01809 Putative membrane protein insertion efficiency factor AMJAP_RS11780 PF05552 Conserved TM helix AMJAP_RS11780 PF00924 Mechanosensitive ion channel AMJAP_RS11785 PF00271 Helicase conserved C-terminal domain AMJAP_RS11785 PF04851 Type III restriction enzyme, res subunit AMJAP_RS11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11790 PF03466 LysR substrate binding domain AMJAP_RS11805 PF08534 Redoxin AMJAP_RS11805 PF00462 Glutaredoxin AMJAP_RS11815 PF03591 AzlC protein AMJAP_RS11850 PF03466 LysR substrate binding domain AMJAP_RS11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11855 PF01810 LysE type translocator AMJAP_RS11860 PF12801 4Fe-4S binding domain AMJAP_RS11860 PF04205 FMN-binding domain AMJAP_RS11865 PF03466 LysR substrate binding domain AMJAP_RS11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS11870 PF03358 NADPH-dependent FMN reductase AMJAP_RS11875 PF01292 Prokaryotic cytochrome b561 AMJAP_RS11880 PF04264 YceI-like domain AMJAP_RS11885 PF03061 Thioesterase superfamily AMJAP_RS11890 PF03641 Possible lysine decarboxylase AMJAP_RS11895 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS11900 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AMJAP_RS11905 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS11920 PF02347 Glycine cleavage system P-protein AMJAP_RS11925 PF01597 Glycine cleavage H-protein AMJAP_RS11930 PF00464 Serine hydroxymethyltransferase AMJAP_RS11935 PF03315 Serine dehydratase beta chain AMJAP_RS11935 PF03313 Serine dehydratase alpha chain AMJAP_RS11945 PF01235 Sodium:alanine symporter family AMJAP_RS11950 PF01571 Aminomethyltransferase folate-binding domain AMJAP_RS11950 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMJAP_RS11955 PF04055 Radical SAM superfamily AMJAP_RS11960 PF01636 Phosphotransferase enzyme family AMJAP_RS11975 PF06339 Ectoine synthase AMJAP_RS11980 PF00202 Aminotransferase class-III AMJAP_RS11985 PF00583 Acetyltransferase (GNAT) family AMJAP_RS11990 PF01047 MarR family AMJAP_RS11995 PF01168 Alanine racemase, N-terminal domain AMJAP_RS11995 PF00842 Alanine racemase, C-terminal domain AMJAP_RS12000 PF01042 Endoribonuclease L-PSP AMJAP_RS12005 PF01266 FAD dependent oxidoreductase AMJAP_RS12010 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12015 PF03466 LysR substrate binding domain AMJAP_RS12020 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS12025 PF01235 Sodium:alanine symporter family AMJAP_RS12030 PF12146 Serine aminopeptidase, S33 AMJAP_RS12035 PF03466 LysR substrate binding domain AMJAP_RS12035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12040 PF00202 Aminotransferase class-III AMJAP_RS12045 PF01381 Helix-turn-helix AMJAP_RS12045 PF07883 Cupin domain AMJAP_RS12050 PF00171 Aldehyde dehydrogenase family AMJAP_RS12055 PF02515 CoA-transferase family III AMJAP_RS12060 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS12060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS12060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS12065 PF04304 Protein of unknown function (DUF454) AMJAP_RS12070 PF01717 Cobalamin-independent synthase, Catalytic domain AMJAP_RS12070 PF08267 Cobalamin-independent synthase, N-terminal domain AMJAP_RS12080 PF01177 Asp/Glu/Hydantoin racemase AMJAP_RS12100 PF04324 BFD-like [2Fe-2S] binding domain AMJAP_RS12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS12110 PF01266 FAD dependent oxidoreductase AMJAP_RS12115 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS12120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS12120 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMJAP_RS12130 PF03466 LysR substrate binding domain AMJAP_RS12130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12140 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMJAP_RS12145 PF01730 UreF AMJAP_RS12150 PF05194 UreE urease accessory protein, C-terminal domain AMJAP_RS12150 PF02814 UreE urease accessory protein, N-terminal domain AMJAP_RS12155 PF00449 Urease alpha-subunit, N-terminal domain AMJAP_RS12155 PF01979 Amidohydrolase family AMJAP_RS12160 PF00699 Urease beta subunit AMJAP_RS12165 PF00547 Urease, gamma subunit AMJAP_RS12170 PF01774 UreD urease accessory protein AMJAP_RS12175 PF00005 ABC transporter AMJAP_RS12180 PF00005 ABC transporter AMJAP_RS12180 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMJAP_RS12190 PF02653 Branched-chain amino acid transport system / permease component AMJAP_RS12215 PF12833 Helix-turn-helix domain AMJAP_RS12215 PF12852 Cupin AMJAP_RS12230 PF00072 Response regulator receiver domain AMJAP_RS12230 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS12235 PF09308 LuxQ, periplasmic AMJAP_RS12235 PF00072 Response regulator receiver domain AMJAP_RS12235 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS12245 PF03466 LysR substrate binding domain AMJAP_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12250 PF01425 Amidase AMJAP_RS12270 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS12270 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS12275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMJAP_RS12275 PF00355 Rieske [2Fe-2S] domain AMJAP_RS12280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMJAP_RS12290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS12305 PF03466 LysR substrate binding domain AMJAP_RS12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMJAP_RS12320 PF00037 4Fe-4S binding domain AMJAP_RS12320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMJAP_RS12325 PF01568 Molydopterin dinucleotide binding domain AMJAP_RS12325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMJAP_RS12325 PF00037 4Fe-4S binding domain AMJAP_RS12325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMJAP_RS12325 PF00384 Molybdopterin oxidoreductase AMJAP_RS12330 PF02634 FdhD/NarQ family AMJAP_RS12360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMJAP_RS12360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS12370 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS12375 PF00106 short chain dehydrogenase AMJAP_RS12390 PF01965 DJ-1/PfpI family AMJAP_RS12390 PF12833 Helix-turn-helix domain AMJAP_RS12395 PF00107 Zinc-binding dehydrogenase AMJAP_RS12395 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS12405 PF00571 CBS domain AMJAP_RS12410 PF00970 Oxidoreductase FAD-binding domain AMJAP_RS12410 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS12410 PF00042 Globin AMJAP_RS12415 PF00355 Rieske [2Fe-2S] domain AMJAP_RS12415 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMJAP_RS12420 PF03807 NADP oxidoreductase coenzyme F420-dependent AMJAP_RS12420 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMJAP_RS12430 PF02028 BCCT, betaine/carnitine/choline family transporter AMJAP_RS12440 PF01012 Electron transfer flavoprotein domain AMJAP_RS12440 PF00766 Electron transfer flavoprotein FAD-binding domain AMJAP_RS12445 PF13183 4Fe-4S dicluster domain AMJAP_RS12445 PF02754 Cysteine-rich domain AMJAP_RS12450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMJAP_RS12485 PF01965 DJ-1/PfpI family AMJAP_RS12485 PF12833 Helix-turn-helix domain AMJAP_RS12490 PF00072 Response regulator receiver domain AMJAP_RS12490 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS12500 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS12500 PF00672 HAMP domain AMJAP_RS12500 PF01627 Hpt domain AMJAP_RS12500 PF00072 Response regulator receiver domain AMJAP_RS12500 PF17149 Periplasmic sensor domain found in signal transduction proteins AMJAP_RS12510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS12525 PF12833 Helix-turn-helix domain AMJAP_RS12530 PF03315 Serine dehydratase beta chain AMJAP_RS12530 PF03313 Serine dehydratase alpha chain AMJAP_RS12535 PF00551 Formyl transferase AMJAP_RS12545 PF17806 Sarcosine oxidase A3 domain AMJAP_RS12545 PF01571 Aminomethyltransferase folate-binding domain AMJAP_RS12545 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMJAP_RS12545 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS12555 PF01266 FAD dependent oxidoreductase AMJAP_RS12560 PF00464 Serine hydroxymethyltransferase AMJAP_RS12565 PF12833 Helix-turn-helix domain AMJAP_RS12580 PF07859 alpha/beta hydrolase fold AMJAP_RS12585 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS12590 PF02649 Type I GTP cyclohydrolase folE2 AMJAP_RS12595 PF01979 Amidohydrolase family AMJAP_RS12600 PF01502 Phosphoribosyl-AMP cyclohydrolase AMJAP_RS12615 PF00698 Acyl transferase domain AMJAP_RS12615 PF08990 Erythronolide synthase docking AMJAP_RS12615 PF09277 Erythronolide synthase, docking AMJAP_RS12615 PF16197 Ketoacyl-synthetase C-terminal extension AMJAP_RS12615 PF02801 Beta-ketoacyl synthase, C-terminal domain AMJAP_RS12615 PF08659 KR domain AMJAP_RS12615 PF00109 Beta-ketoacyl synthase, N-terminal domain AMJAP_RS12615 PF14765 Polyketide synthase dehydratase AMJAP_RS12615 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS12615 PF00550 Phosphopantetheine attachment site AMJAP_RS12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12620 PF03466 LysR substrate binding domain AMJAP_RS12625 PF01323 DSBA-like thioredoxin domain AMJAP_RS12630 PF04337 Protein of unknown function, DUF480 AMJAP_RS12635 PF03473 MOSC domain AMJAP_RS12635 PF03475 3-alpha domain AMJAP_RS12640 PF00158 Sigma-54 interaction domain AMJAP_RS12640 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS12640 PF01590 GAF domain AMJAP_RS12655 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AMJAP_RS12670 PF00171 Aldehyde dehydrogenase family AMJAP_RS12675 PF01494 FAD binding domain AMJAP_RS12680 PF00082 Subtilase family AMJAP_RS12685 PF00005 ABC transporter AMJAP_RS12685 PF00664 ABC transporter transmembrane region AMJAP_RS12695 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AMJAP_RS12710 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS12710 PF00072 Response regulator receiver domain AMJAP_RS12715 PF17149 Periplasmic sensor domain found in signal transduction proteins AMJAP_RS12715 PF01627 Hpt domain AMJAP_RS12715 PF00072 Response regulator receiver domain AMJAP_RS12715 PF00672 HAMP domain AMJAP_RS12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS12715 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS12720 PF00171 Aldehyde dehydrogenase family AMJAP_RS12730 PF01427 D-ala-D-ala dipeptidase AMJAP_RS12735 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS12740 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS12740 PF00563 EAL domain AMJAP_RS12740 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS12750 PF00271 Helicase conserved C-terminal domain AMJAP_RS12750 PF00270 DEAD/DEAH box helicase AMJAP_RS12755 PF07690 Major Facilitator Superfamily AMJAP_RS12760 PF07690 Major Facilitator Superfamily AMJAP_RS12765 PF00672 HAMP domain AMJAP_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS12765 PF07730 Histidine kinase AMJAP_RS12765 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AMJAP_RS12770 PF00072 Response regulator receiver domain AMJAP_RS12770 PF00196 Bacterial regulatory proteins, luxR family AMJAP_RS12775 PF07690 Major Facilitator Superfamily AMJAP_RS12780 PF00069 Protein kinase domain AMJAP_RS12780 PF03793 PASTA domain AMJAP_RS12785 PF04055 Radical SAM superfamily AMJAP_RS12805 PF12804 MobA-like NTP transferase domain AMJAP_RS12810 PF03453 MoeA N-terminal region (domain I and II) AMJAP_RS12810 PF03454 MoeA C-terminal region (domain IV) AMJAP_RS12810 PF00994 Probable molybdopterin binding domain AMJAP_RS12815 PF00994 Probable molybdopterin binding domain AMJAP_RS12820 PF13545 Crp-like helix-turn-helix domain AMJAP_RS12820 PF00027 Cyclic nucleotide-binding domain AMJAP_RS12825 PF04055 Radical SAM superfamily AMJAP_RS12825 PF06463 Molybdenum Cofactor Synthesis C AMJAP_RS12830 PF00484 Carbonic anhydrase AMJAP_RS12835 PF00639 PPIC-type PPIASE domain AMJAP_RS12835 PF09312 SurA N-terminal domain AMJAP_RS12840 PF02665 Nitrate reductase gamma subunit AMJAP_RS12845 PF02613 Nitrate reductase delta subunit AMJAP_RS12850 PF14711 Respiratory nitrate reductase beta C-terminal AMJAP_RS12850 PF13247 4Fe-4S dicluster domain AMJAP_RS12855 PF01568 Molydopterin dinucleotide binding domain AMJAP_RS12855 PF00384 Molybdopterin oxidoreductase AMJAP_RS12855 PF14710 Respiratory nitrate reductase alpha N-terminal AMJAP_RS12880 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS12880 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS12880 PF00563 EAL domain AMJAP_RS12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS12885 PF03466 LysR substrate binding domain AMJAP_RS12900 PF01425 Amidase AMJAP_RS12915 PF00005 ABC transporter AMJAP_RS12915 PF12848 ABC transporter AMJAP_RS12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS12940 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS12940 PF00072 Response regulator receiver domain AMJAP_RS12965 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS12970 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMJAP_RS12970 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMJAP_RS12975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMJAP_RS12975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMJAP_RS12980 PF00005 ABC transporter AMJAP_RS12985 PF00296 Luciferase-like monooxygenase AMJAP_RS13005 PF13614 AAA domain AMJAP_RS13010 PF00672 HAMP domain AMJAP_RS13010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS13010 PF12729 Four helix bundle sensory module for signal transduction AMJAP_RS13020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS13020 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS13020 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMJAP_RS13020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS13025 PF00766 Electron transfer flavoprotein FAD-binding domain AMJAP_RS13025 PF01012 Electron transfer flavoprotein domain AMJAP_RS13030 PF01012 Electron transfer flavoprotein domain AMJAP_RS13035 PF12833 Helix-turn-helix domain AMJAP_RS13035 PF02311 AraC-like ligand binding domain AMJAP_RS13045 PF00501 AMP-binding enzyme AMJAP_RS13045 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS13050 PF13188 PAS domain AMJAP_RS13050 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS13050 PF08448 PAS fold AMJAP_RS13050 PF00072 Response regulator receiver domain AMJAP_RS13055 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS13055 PF00072 Response regulator receiver domain AMJAP_RS13065 PF01061 ABC-2 type transporter AMJAP_RS13070 PF00005 ABC transporter AMJAP_RS13085 PF01613 Flavin reductase like domain AMJAP_RS13090 PF01609 Transposase DDE domain AMJAP_RS13090 PF05598 Transposase domain (DUF772) AMJAP_RS13095 PF00582 Universal stress protein family AMJAP_RS13105 PF14870 Photosynthesis system II assembly factor YCF48 AMJAP_RS13110 PF07044 Protein of unknown function (DUF1329) AMJAP_RS13125 PF00561 alpha/beta hydrolase fold AMJAP_RS13130 PF01565 FAD binding domain AMJAP_RS13130 PF09330 D-lactate dehydrogenase, membrane binding AMJAP_RS13135 PF00106 short chain dehydrogenase AMJAP_RS13140 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AMJAP_RS13140 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMJAP_RS13145 PF00682 HMGL-like AMJAP_RS13145 PF07836 DmpG-like communication domain AMJAP_RS13155 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS13155 PF00501 AMP-binding enzyme AMJAP_RS13165 PF02678 Pirin AMJAP_RS13165 PF05726 Pirin C-terminal cupin domain AMJAP_RS13175 PF00881 Nitroreductase family AMJAP_RS13180 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS13180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMJAP_RS13180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMJAP_RS13185 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS13190 PF02803 Thiolase, C-terminal domain AMJAP_RS13190 PF00108 Thiolase, N-terminal domain AMJAP_RS13195 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMJAP_RS13195 PF12833 Helix-turn-helix domain AMJAP_RS13210 PF12327 FtsZ family, C-terminal domain AMJAP_RS13210 PF00091 Tubulin/FtsZ family, GTPase domain AMJAP_RS13215 PF02491 SHS2 domain inserted in FTSA AMJAP_RS13225 PF02646 RmuC family AMJAP_RS13255 PF13617 YnbE-like lipoprotein AMJAP_RS13280 PF02347 Glycine cleavage system P-protein AMJAP_RS13290 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS13300 PF03466 LysR substrate binding domain AMJAP_RS13310 PF03466 LysR substrate binding domain AMJAP_RS13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS13315 PF02678 Pirin AMJAP_RS13315 PF17954 Quercetinase C-terminal cupin domain AMJAP_RS13320 PF00857 Isochorismatase family AMJAP_RS13325 PF03193 RsgA GTPase AMJAP_RS13335 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS13335 PF10431 C-terminal, D2-small domain, of ClpB protein AMJAP_RS13335 PF07724 AAA domain (Cdc48 subfamily) AMJAP_RS13340 PF00270 DEAD/DEAH box helicase AMJAP_RS13340 PF00271 Helicase conserved C-terminal domain AMJAP_RS13355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS13355 PF03466 LysR substrate binding domain AMJAP_RS13360 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS13370 PF13476 AAA domain AMJAP_RS13375 PF00149 Calcineurin-like phosphoesterase AMJAP_RS13375 PF12320 Type 5 capsule protein repressor C-terminal domain AMJAP_RS13380 PF03458 UPF0126 domain AMJAP_RS13395 PF12833 Helix-turn-helix domain AMJAP_RS13395 PF02311 AraC-like ligand binding domain AMJAP_RS13400 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMJAP_RS13405 PF00005 ABC transporter AMJAP_RS13420 PF01476 LysM domain AMJAP_RS13420 PF08525 Opacity-associated protein A N-terminal motif AMJAP_RS13420 PF01551 Peptidase family M23 AMJAP_RS13440 PF01292 Prokaryotic cytochrome b561 AMJAP_RS13450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMJAP_RS13455 PF00583 Acetyltransferase (GNAT) family AMJAP_RS13455 PF09500 Putative thioesterase (yiiD_Cterm) AMJAP_RS13460 PF00881 Nitroreductase family AMJAP_RS13465 PF14489 QueF-like protein AMJAP_RS13465 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AMJAP_RS13470 PF01061 ABC-2 type transporter AMJAP_RS13475 PF00005 ABC transporter AMJAP_RS13485 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS13485 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS13485 PF00563 EAL domain AMJAP_RS13525 PF04143 Sulphur transport AMJAP_RS13530 PF01037 Lrp/AsnC ligand binding domain AMJAP_RS13535 PF07670 Nucleoside recognition AMJAP_RS13540 PF00892 EamA-like transporter family AMJAP_RS13555 PF00216 Bacterial DNA-binding protein AMJAP_RS13560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMJAP_RS13560 PF01588 Putative tRNA binding domain AMJAP_RS13560 PF03147 Ferredoxin-fold anticodon binding domain AMJAP_RS13560 PF03483 B3/4 domain AMJAP_RS13560 PF03484 tRNA synthetase B5 domain AMJAP_RS13565 PF01409 tRNA synthetases class II core domain (F) AMJAP_RS13565 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMJAP_RS13570 PF00453 Ribosomal protein L20 AMJAP_RS13575 PF01632 Ribosomal protein L35 AMJAP_RS13580 PF05198 Translation initiation factor IF-3, N-terminal domain AMJAP_RS13580 PF00707 Translation initiation factor IF-3, C-terminal domain AMJAP_RS13585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMJAP_RS13585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMJAP_RS13585 PF02824 TGS domain AMJAP_RS13585 PF03129 Anticodon binding domain AMJAP_RS13590 PF07840 FadR C-terminal domain AMJAP_RS13590 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS13595 PF02754 Cysteine-rich domain AMJAP_RS13600 PF02589 LUD domain AMJAP_RS13600 PF13183 4Fe-4S dicluster domain AMJAP_RS13600 PF11870 Domain of unknown function (DUF3390) AMJAP_RS13605 PF02589 LUD domain AMJAP_RS13610 PF00034 Cytochrome c AMJAP_RS13610 PF03150 Di-haem cytochrome c peroxidase AMJAP_RS13615 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS13615 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS13615 PF00563 EAL domain AMJAP_RS13630 PF00136 DNA polymerase family B AMJAP_RS13630 PF03104 DNA polymerase family B, exonuclease domain AMJAP_RS13645 PF08544 GHMP kinases C terminal AMJAP_RS13645 PF00288 GHMP kinases N terminal domain AMJAP_RS13650 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AMJAP_RS13650 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AMJAP_RS13655 PF01070 FMN-dependent dehydrogenase AMJAP_RS13675 PF00764 Arginosuccinate synthase AMJAP_RS13685 PF00929 Exonuclease AMJAP_RS13690 PF00578 AhpC/TSA family AMJAP_RS13690 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMJAP_RS13695 PF00462 Glutaredoxin AMJAP_RS13700 PF00202 Aminotransferase class-III AMJAP_RS13705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMJAP_RS13705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMJAP_RS13710 PF03466 LysR substrate binding domain AMJAP_RS13710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS13720 PF02627 Carboxymuconolactone decarboxylase family AMJAP_RS13725 PF01474 Class-II DAHP synthetase family AMJAP_RS13745 PF07556 Protein of unknown function (DUF1538) AMJAP_RS13750 PF07556 Protein of unknown function (DUF1538) AMJAP_RS13770 PF00571 CBS domain AMJAP_RS13770 PF01743 Poly A polymerase head domain AMJAP_RS13775 PF01842 ACT domain AMJAP_RS13775 PF00551 Formyl transferase AMJAP_RS13780 PF00591 Glycosyl transferase family, a/b domain AMJAP_RS13780 PF02885 Glycosyl transferase family, helical bundle domain AMJAP_RS13780 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMJAP_RS13795 PF00881 Nitroreductase family AMJAP_RS13810 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS13810 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS13810 PF00563 EAL domain AMJAP_RS13815 PF00258 Flavodoxin AMJAP_RS13830 PF05683 Fumarase C-terminus AMJAP_RS13830 PF05681 Fumarate hydratase (Fumerase) AMJAP_RS13835 PF01040 UbiA prenyltransferase family AMJAP_RS13840 PF01136 Peptidase family U32 AMJAP_RS13840 PF16325 Peptidase family U32 C-terminal domain AMJAP_RS13850 PF13417 Glutathione S-transferase, N-terminal domain AMJAP_RS13850 PF00043 Glutathione S-transferase, C-terminal domain AMJAP_RS13860 PF00118 TCP-1/cpn60 chaperonin family AMJAP_RS13865 PF00166 Chaperonin 10 Kd subunit AMJAP_RS13870 PF04186 FxsA cytoplasmic membrane protein AMJAP_RS13880 PF07690 Major Facilitator Superfamily AMJAP_RS13885 PF04461 Protein of unknown function (DUF520) AMJAP_RS13890 PF02558 Ketopantoate reductase PanE/ApbA AMJAP_RS13890 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMJAP_RS13895 PF03976 Polyphosphate kinase 2 (PPK2) AMJAP_RS13900 PF07715 TonB-dependent Receptor Plug Domain AMJAP_RS13900 PF00593 TonB dependent receptor AMJAP_RS13905 PF01923 Cobalamin adenosyltransferase AMJAP_RS13915 PF01497 Periplasmic binding protein AMJAP_RS13930 PF00107 Zinc-binding dehydrogenase AMJAP_RS13930 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS13935 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS13935 PF07729 FCD domain AMJAP_RS13945 PF01784 NIF3 (NGG1p interacting factor 3) AMJAP_RS13950 PF13180 PDZ domain AMJAP_RS13955 PF00815 Histidinol dehydrogenase AMJAP_RS13960 PF01634 ATP phosphoribosyltransferase AMJAP_RS13965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMJAP_RS13985 PF02470 MlaD protein AMJAP_RS13990 PF02405 Permease MlaE AMJAP_RS13995 PF00005 ABC transporter AMJAP_RS14000 PF01699 Sodium/calcium exchanger protein AMJAP_RS14005 PF00571 CBS domain AMJAP_RS14005 PF01380 SIS domain AMJAP_RS14020 PF03968 OstA-like protein AMJAP_RS14025 PF00005 ABC transporter AMJAP_RS14025 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMJAP_RS14030 PF04963 Sigma-54 factor, core binding domain AMJAP_RS14030 PF04552 Sigma-54, DNA binding domain AMJAP_RS14030 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMJAP_RS14035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMJAP_RS14040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMJAP_RS14045 PF03668 P-loop ATPase protein family AMJAP_RS14050 PF00381 PTS HPr component phosphorylation site AMJAP_RS14055 PF00571 CBS domain AMJAP_RS14055 PF01769 Divalent cation transporter AMJAP_RS14055 PF03448 MgtE intracellular N domain AMJAP_RS14060 PF04751 Protein of unknown function (DUF615) AMJAP_RS14070 PF00575 S1 RNA binding domain AMJAP_RS14070 PF10150 Ribonuclease E/G family AMJAP_RS14075 PF02545 Maf-like protein AMJAP_RS14080 PF04093 rod shape-determining protein MreD AMJAP_RS14085 PF04085 rod shape-determining protein MreC AMJAP_RS14095 PF02686 Glu-tRNAGln amidotransferase C subunit AMJAP_RS14100 PF01425 Amidase AMJAP_RS14105 PF02934 GatB/GatE catalytic domain AMJAP_RS14105 PF02637 GatB domain AMJAP_RS14110 PF01625 Peptide methionine sulfoxide reductase AMJAP_RS14115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMJAP_RS14115 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMJAP_RS14125 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMJAP_RS14165 PF00313 'Cold-shock' DNA-binding domain AMJAP_RS14170 PF04102 SlyX AMJAP_RS14175 PF04445 Putative SAM-dependent methyltransferase AMJAP_RS14180 PF02673 Bacitracin resistance protein BacA AMJAP_RS14185 PF00814 Glycoprotease family AMJAP_RS14190 PF02441 Flavoprotein AMJAP_RS14195 PF02875 Mur ligase family, glutamate ligase domain AMJAP_RS14195 PF08245 Mur ligase middle domain AMJAP_RS14195 PF01225 Mur ligase family, catalytic domain AMJAP_RS14200 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AMJAP_RS14205 PF00719 Inorganic pyrophosphatase AMJAP_RS14210 PF05661 Protein of unknown function (DUF808) AMJAP_RS14220 PF00881 Nitroreductase family AMJAP_RS14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS14225 PF03466 LysR substrate binding domain AMJAP_RS14250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMJAP_RS14250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMJAP_RS14255 PF00860 Permease family AMJAP_RS14265 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AMJAP_RS14275 PF01220 Dehydroquinase class II AMJAP_RS14280 PF00364 Biotin-requiring enzyme AMJAP_RS14285 PF02785 Biotin carboxylase C-terminal domain AMJAP_RS14285 PF00289 Biotin carboxylase, N-terminal domain AMJAP_RS14285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMJAP_RS14300 PF01207 Dihydrouridine synthase (Dus) AMJAP_RS14305 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS14310 PF02142 MGS-like domain AMJAP_RS14310 PF01808 AICARFT/IMPCHase bienzyme AMJAP_RS14315 PF02843 Phosphoribosylglycinamide synthetase, C domain AMJAP_RS14315 PF02844 Phosphoribosylglycinamide synthetase, N domain AMJAP_RS14315 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMJAP_RS14330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AMJAP_RS14330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMJAP_RS14335 PF00676 Dehydrogenase E1 component AMJAP_RS14340 PF02779 Transketolase, pyrimidine binding domain AMJAP_RS14340 PF02780 Transketolase, C-terminal domain AMJAP_RS14345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMJAP_RS14345 PF02817 e3 binding domain AMJAP_RS14345 PF00364 Biotin-requiring enzyme AMJAP_RS14350 PF08298 PrkA AAA domain AMJAP_RS14350 PF06798 PrkA serine protein kinase C-terminal domain AMJAP_RS14355 PF04285 Protein of unknown function (DUF444) AMJAP_RS14360 PF04293 SpoVR like protein AMJAP_RS14365 PF01230 HIT domain AMJAP_RS14375 PF01515 Phosphate acetyl/butaryl transferase AMJAP_RS14380 PF00871 Acetokinase family AMJAP_RS14390 PF00873 AcrB/AcrD/AcrF family AMJAP_RS14415 PF03831 PhnA domain AMJAP_RS14415 PF08274 PhnA Zinc-Ribbon AMJAP_RS14425 PF00588 SpoU rRNA Methylase family AMJAP_RS14425 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMJAP_RS14430 PF00762 Ferrochelatase AMJAP_RS14435 PF05191 Adenylate kinase, active site lid AMJAP_RS14440 PF00311 Phosphoenolpyruvate carboxylase AMJAP_RS14450 PF03819 MazG nucleotide pyrophosphohydrolase domain AMJAP_RS14455 PF02824 TGS domain AMJAP_RS14455 PF04607 Region found in RelA / SpoT proteins AMJAP_RS14455 PF13291 ACT domain AMJAP_RS14460 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS14470 PF01648 4'-phosphopantetheinyl transferase superfamily AMJAP_RS14475 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMJAP_RS14480 PF02565 Recombination protein O C terminal AMJAP_RS14480 PF11967 Recombination protein O N terminal AMJAP_RS14485 PF01926 50S ribosome-binding GTPase AMJAP_RS14485 PF07650 KH domain AMJAP_RS14490 PF00035 Double-stranded RNA binding motif AMJAP_RS14490 PF14622 Ribonuclease-III-like AMJAP_RS14500 PF10502 Signal peptidase, peptidase S26 AMJAP_RS14505 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS14505 PF03144 Elongation factor Tu domain 2 AMJAP_RS14505 PF00679 Elongation factor G C-terminus AMJAP_RS14505 PF06421 GTP-binding protein LepA C-terminus AMJAP_RS14510 PF13180 PDZ domain AMJAP_RS14520 PF03873 Anti sigma-E protein RseA, C-terminal domain AMJAP_RS14520 PF03872 Anti sigma-E protein RseA, N-terminal domain AMJAP_RS14525 PF04542 Sigma-70 region 2 AMJAP_RS14525 PF08281 Sigma-70, region 4 AMJAP_RS14530 PF00890 FAD binding domain AMJAP_RS14530 PF02910 Fumarate reductase flavoprotein C-term AMJAP_RS14540 PF03937 Flavinator of succinate dehydrogenase AMJAP_RS14570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMJAP_RS14570 PF01926 50S ribosome-binding GTPase AMJAP_RS14575 PF13360 PQQ-like domain AMJAP_RS14580 PF09976 Tetratricopeptide repeat-like domain AMJAP_RS14585 PF03129 Anticodon binding domain AMJAP_RS14585 PF13393 Histidyl-tRNA synthetase AMJAP_RS14600 PF04055 Radical SAM superfamily AMJAP_RS14605 PF00334 Nucleoside diphosphate kinase AMJAP_RS14610 PF04384 Iron-sulphur cluster assembly AMJAP_RS14615 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS14620 PF00012 Hsp70 protein AMJAP_RS14625 PF07743 HSCB C-terminal oligomerisation domain AMJAP_RS14630 PF01521 Iron-sulphur cluster biosynthesis AMJAP_RS14635 PF01592 NifU-like N terminal domain AMJAP_RS14640 PF00266 Aminotransferase class-V AMJAP_RS14645 PF02082 Transcriptional regulator AMJAP_RS14650 PF00588 SpoU rRNA Methylase family AMJAP_RS14655 PF00459 Inositol monophosphatase family AMJAP_RS14660 PF00709 Adenylosuccinate synthetase AMJAP_RS14665 PF13393 Histidyl-tRNA synthetase AMJAP_RS14675 PF01145 SPFH domain / Band 7 family AMJAP_RS14680 PF01145 SPFH domain / Band 7 family AMJAP_RS14680 PF12221 Bacterial membrane protein N terminal AMJAP_RS14685 PF01926 50S ribosome-binding GTPase AMJAP_RS14685 PF16360 GTP-binding GTPase Middle Region AMJAP_RS14685 PF13167 GTP-binding GTPase N-terminal AMJAP_RS14690 PF17209 Hfq protein AMJAP_RS14700 PF08676 MutL C terminal dimerisation domain AMJAP_RS14700 PF01119 DNA mismatch repair protein, C-terminal domain AMJAP_RS14705 PF11741 AMIN domain AMJAP_RS14705 PF01520 N-acetylmuramoyl-L-alanine amidase AMJAP_RS14710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMJAP_RS14715 PF03853 YjeF-related protein N-terminus AMJAP_RS14715 PF01256 Carbohydrate kinase AMJAP_RS14720 PF08331 Domain of unknown function (DUF1730) AMJAP_RS14725 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS14725 PF08448 PAS fold AMJAP_RS14725 PF00563 EAL domain AMJAP_RS14730 PF00929 Exonuclease AMJAP_RS14735 PF03193 RsgA GTPase AMJAP_RS14745 PF00581 Rhodanese-like domain AMJAP_RS14750 PF02666 Phosphatidylserine decarboxylase AMJAP_RS14760 PF08207 Elongation factor P (EF-P) KOW-like domain AMJAP_RS14760 PF09285 Elongation factor P, C-terminal AMJAP_RS14760 PF01132 Elongation factor P (EF-P) OB domain AMJAP_RS14770 PF03167 Uracil DNA glycosylase superfamily AMJAP_RS14780 PF01336 OB-fold nucleic acid binding domain AMJAP_RS14780 PF00152 tRNA synthetases class II (D, K and N) AMJAP_RS14785 PF00472 RF-1 domain AMJAP_RS14785 PF03462 PCRF domain AMJAP_RS14790 PF03600 Citrate transporter AMJAP_RS14795 PF00258 Flavodoxin AMJAP_RS14805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMJAP_RS14815 PF04143 Sulphur transport AMJAP_RS14825 PF03739 Lipopolysaccharide export system permease LptF/LptG AMJAP_RS14830 PF03739 Lipopolysaccharide export system permease LptF/LptG AMJAP_RS14835 PF02789 Cytosol aminopeptidase family, N-terminal domain AMJAP_RS14835 PF00883 Cytosol aminopeptidase family, catalytic domain AMJAP_RS14840 PF04364 DNA polymerase III chi subunit, HolC AMJAP_RS14850 PF10458 Valyl tRNA synthetase tRNA binding arm AMJAP_RS14850 PF08264 Anticodon-binding domain of tRNA AMJAP_RS14850 PF00133 tRNA synthetases class I (I, L, M and V) AMJAP_RS14880 PF06062 Uncharacterised protein family (UPF0231) AMJAP_RS14890 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS14890 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS14890 PF00563 EAL domain AMJAP_RS14895 PF00155 Aminotransferase class I and II AMJAP_RS14895 PF00392 Bacterial regulatory proteins, gntR family AMJAP_RS14900 PF13746 4Fe-4S dicluster domain AMJAP_RS14900 PF12801 4Fe-4S binding domain AMJAP_RS14900 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AMJAP_RS14915 PF01145 SPFH domain / Band 7 family AMJAP_RS14915 PF16200 C-terminal region of band_7 AMJAP_RS14925 PF00440 Bacterial regulatory proteins, tetR family AMJAP_RS14935 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS14935 PF00072 Response regulator receiver domain AMJAP_RS14955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS14960 PF02230 Phospholipase/Carboxylesterase AMJAP_RS14965 PF01243 Pyridoxamine 5'-phosphate oxidase AMJAP_RS14965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMJAP_RS14970 PF03881 Fructosamine kinase AMJAP_RS14975 PF04403 Paraquat-inducible protein A AMJAP_RS14980 PF04403 Paraquat-inducible protein A AMJAP_RS14985 PF02470 MlaD protein AMJAP_RS15000 PF00485 Phosphoribulokinase / Uridine kinase family AMJAP_RS15010 PF13533 Biotin-lipoyl like AMJAP_RS15015 PF00873 AcrB/AcrD/AcrF family AMJAP_RS15025 PF00155 Aminotransferase class I and II AMJAP_RS15030 PF03960 ArsC family AMJAP_RS15035 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AMJAP_RS15035 PF14602 Hexapeptide repeat of succinyl-transferase AMJAP_RS15040 PF07687 Peptidase dimerisation domain AMJAP_RS15040 PF01546 Peptidase family M20/M25/M40 AMJAP_RS15045 PF13847 Methyltransferase domain AMJAP_RS15065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS15065 PF03466 LysR substrate binding domain AMJAP_RS15070 PF03601 Conserved hypothetical protein 698 AMJAP_RS15075 PF03449 Transcription elongation factor, N-terminal AMJAP_RS15075 PF01272 Transcription elongation factor, GreA/GreB, C-term AMJAP_RS15105 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AMJAP_RS15105 PF12833 Helix-turn-helix domain AMJAP_RS15115 PF07044 Protein of unknown function (DUF1329) AMJAP_RS15130 PF02664 S-Ribosylhomocysteinase (LuxS) AMJAP_RS15140 PF05656 Protein of unknown function (DUF805) AMJAP_RS15160 PF00586 AIR synthase related protein, N-terminal domain AMJAP_RS15160 PF02769 AIR synthase related protein, C-terminal domain AMJAP_RS15170 PF01625 Peptide methionine sulfoxide reductase AMJAP_RS15170 PF01641 SelR domain AMJAP_RS15185 PF04336 Acyl carrier protein phosphodiesterase AMJAP_RS15190 PF00108 Thiolase, N-terminal domain AMJAP_RS15190 PF02803 Thiolase, C-terminal domain AMJAP_RS15195 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS15195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMJAP_RS15195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMJAP_RS15200 PF01553 Acyltransferase AMJAP_RS15205 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS15215 PF13193 AMP-binding enzyme C-terminal domain AMJAP_RS15215 PF00501 AMP-binding enzyme AMJAP_RS15225 PF02770 Acyl-CoA dehydrogenase, middle domain AMJAP_RS15225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMJAP_RS15225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_RS15225 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMJAP_RS15245 PF13458 Periplasmic binding protein AMJAP_RS15250 PF02653 Branched-chain amino acid transport system / permease component AMJAP_RS15255 PF02653 Branched-chain amino acid transport system / permease component AMJAP_RS15255 PF11862 Domain of unknown function (DUF3382) AMJAP_RS15260 PF00005 ABC transporter AMJAP_RS15260 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMJAP_RS15265 PF00005 ABC transporter AMJAP_RS15275 PF00158 Sigma-54 interaction domain AMJAP_RS15275 PF13185 GAF domain AMJAP_RS15275 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS15280 PF01144 Coenzyme A transferase AMJAP_RS15305 PF01042 Endoribonuclease L-PSP AMJAP_RS15310 PF13380 CoA binding domain AMJAP_RS15315 PF00899 ThiF family AMJAP_RS15320 PF13847 Methyltransferase domain AMJAP_RS15320 PF17827 PrmC N-terminal domain AMJAP_RS15325 PF00472 RF-1 domain AMJAP_RS15325 PF03462 PCRF domain AMJAP_RS15330 PF01488 Shikimate / quinate 5-dehydrogenase AMJAP_RS15330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AMJAP_RS15330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AMJAP_RS15340 PF03550 Outer membrane lipoprotein LolB AMJAP_RS15350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMJAP_RS15350 PF14572 Phosphoribosyl synthetase-associated domain AMJAP_RS15355 PF14693 Ribosomal protein TL5, C-terminal domain AMJAP_RS15355 PF01386 Ribosomal L25p family AMJAP_RS15360 PF01195 Peptidyl-tRNA hydrolase AMJAP_RS15365 PF01926 50S ribosome-binding GTPase AMJAP_RS15365 PF06071 Protein of unknown function (DUF933) AMJAP_RS15430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMJAP_RS15435 PF01043 SecA preprotein cross-linking domain AMJAP_RS15435 PF07517 SecA DEAD-like domain AMJAP_RS15460 PF02321 Outer membrane efflux protein AMJAP_RS15465 PF00773 RNB domain AMJAP_RS15465 PF08206 Ribonuclease B OB domain AMJAP_RS15465 PF08461 Ribonuclease R winged-helix domain AMJAP_RS15465 PF00575 S1 RNA binding domain AMJAP_RS15465 PF17876 Cold shock domain AMJAP_RS15470 PF07549 SecD/SecF GG Motif AMJAP_RS15470 PF02355 Protein export membrane protein AMJAP_RS15475 PF07549 SecD/SecF GG Motif AMJAP_RS15475 PF13721 SecD export protein N-terminal TM region AMJAP_RS15475 PF02355 Protein export membrane protein AMJAP_RS15480 PF02699 Preprotein translocase subunit AMJAP_RS15485 PF01702 Queuine tRNA-ribosyltransferase AMJAP_RS15490 PF02547 Queuosine biosynthesis protein AMJAP_RS15505 PF17773 UPF0176 acylphosphatase like domain AMJAP_RS15505 PF00581 Rhodanese-like domain AMJAP_RS15510 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS15510 PF00072 Response regulator receiver domain AMJAP_RS15515 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS15515 PF13426 PAS domain AMJAP_RS15515 PF00672 HAMP domain AMJAP_RS15520 PF00092 von Willebrand factor type A domain AMJAP_RS15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS15525 PF03466 LysR substrate binding domain AMJAP_RS15530 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS15530 PF00970 Oxidoreductase FAD-binding domain AMJAP_RS15540 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS15555 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMJAP_RS15570 PF05114 Protein of unknown function (DUF692) AMJAP_RS15580 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS15580 PF00043 Glutathione S-transferase, C-terminal domain AMJAP_RS15585 PF02798 Glutathione S-transferase, N-terminal domain AMJAP_RS15585 PF00043 Glutathione S-transferase, C-terminal domain AMJAP_RS15590 PF16868 NMT1-like family AMJAP_RS15610 PF00378 Enoyl-CoA hydratase/isomerase AMJAP_RS15615 PF13380 CoA binding domain AMJAP_RS15615 PF13607 Succinyl-CoA ligase like flavodoxin domain AMJAP_RS15625 PF03466 LysR substrate binding domain AMJAP_RS15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS15630 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS15630 PF06505 Activator of aromatic catabolism AMJAP_RS15630 PF00158 Sigma-54 interaction domain AMJAP_RS15630 PF02830 V4R domain AMJAP_RS15635 PF00296 Luciferase-like monooxygenase AMJAP_RS15660 PF01361 Tautomerase enzyme AMJAP_RS15675 PF07836 DmpG-like communication domain AMJAP_RS15675 PF00682 HMGL-like AMJAP_RS15680 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMJAP_RS15680 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AMJAP_RS15690 PF00171 Aldehyde dehydrogenase family AMJAP_RS15695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMJAP_RS15700 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS15705 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AMJAP_RS15710 PF13409 Glutathione S-transferase, N-terminal domain AMJAP_RS15715 PF03466 LysR substrate binding domain AMJAP_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS15720 PF00970 Oxidoreductase FAD-binding domain AMJAP_RS15720 PF00111 2Fe-2S iron-sulfur cluster binding domain AMJAP_RS15720 PF00175 Oxidoreductase NAD-binding domain AMJAP_RS15725 PF04663 Phenol hydroxylase conserved region AMJAP_RS15730 PF02332 Methane/Phenol/Toluene Hydroxylase AMJAP_RS15730 PF04945 YHS domain AMJAP_RS15735 PF02406 MmoB/DmpM family AMJAP_RS15740 PF02332 Methane/Phenol/Toluene Hydroxylase AMJAP_RS15745 PF06099 Phenol hydroxylase subunit AMJAP_RS15750 PF02830 V4R domain AMJAP_RS15750 PF00158 Sigma-54 interaction domain AMJAP_RS15750 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS15750 PF06505 Activator of aromatic catabolism AMJAP_RS15755 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS15755 PF00563 EAL domain AMJAP_RS15755 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS15760 PF00756 Putative esterase AMJAP_RS15765 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS15765 PF00107 Zinc-binding dehydrogenase AMJAP_RS15770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS15770 PF03466 LysR substrate binding domain AMJAP_RS15785 PF00005 ABC transporter AMJAP_RS15785 PF00664 ABC transporter transmembrane region AMJAP_RS15800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS15805 PF00072 Response regulator receiver domain AMJAP_RS15805 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS15815 PF00563 EAL domain AMJAP_RS15815 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS15815 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS15820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMJAP_RS15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS15820 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS15820 PF00672 HAMP domain AMJAP_RS15820 PF01627 Hpt domain AMJAP_RS15820 PF00072 Response regulator receiver domain AMJAP_RS15845 PF01678 Diaminopimelate epimerase AMJAP_RS15850 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS15855 PF00005 ABC transporter AMJAP_RS15855 PF03466 LysR substrate binding domain AMJAP_RS15865 PF17151 Periplasmic sensor domain AMJAP_RS15865 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS15870 PF01810 LysE type translocator AMJAP_RS15875 PF05175 Methyltransferase small domain AMJAP_RS15880 PF07715 TonB-dependent Receptor Plug Domain AMJAP_RS15880 PF00593 TonB dependent receptor AMJAP_RS15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS15890 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS15890 PF00072 Response regulator receiver domain AMJAP_RS15890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMJAP_RS15890 PF00672 HAMP domain AMJAP_RS15890 PF01627 Hpt domain AMJAP_RS15925 PF04893 Yip1 domain AMJAP_RS15930 PF01040 UbiA prenyltransferase family AMJAP_RS15935 PF02628 Cytochrome oxidase assembly protein AMJAP_RS15955 PF00510 Cytochrome c oxidase subunit III AMJAP_RS15960 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMJAP_RS15965 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMJAP_RS15970 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMJAP_RS15970 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMJAP_RS15975 PF01794 Ferric reductase like transmembrane component AMJAP_RS15980 PF00174 Oxidoreductase molybdopterin binding domain AMJAP_RS15985 PF01066 CDP-alcohol phosphatidyltransferase AMJAP_RS15990 PF02568 Thiamine biosynthesis protein (ThiI) AMJAP_RS15990 PF00958 GMP synthase C terminal domain AMJAP_RS15990 PF00117 Glutamine amidotransferase class-I AMJAP_RS15995 PF01494 FAD binding domain AMJAP_RS16000 PF03466 LysR substrate binding domain AMJAP_RS16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMJAP_RS16025 PF10369 Small subunit of acetolactate synthase AMJAP_RS16030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMJAP_RS16030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMJAP_RS16030 PF00205 Thiamine pyrophosphate enzyme, central domain AMJAP_RS16040 PF00579 tRNA synthetases class I (W and Y) AMJAP_RS16045 PF01551 Peptidase family M23 AMJAP_RS16045 PF04225 Opacity-associated protein A LysM-like domain AMJAP_RS16055 PF01521 Iron-sulphur cluster biosynthesis AMJAP_RS16060 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMJAP_RS16060 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMJAP_RS16065 PF00654 Voltage gated chloride channel AMJAP_RS16070 PF02581 Thiamine monophosphate synthase AMJAP_RS16075 PF00202 Aminotransferase class-III AMJAP_RS16095 PF00027 Cyclic nucleotide-binding domain AMJAP_RS16095 PF13545 Crp-like helix-turn-helix domain AMJAP_RS16105 PF08406 CbbQ/NirQ/NorQ C-terminal AMJAP_RS16105 PF07728 AAA domain (dynein-related subfamily) AMJAP_RS16115 PF00510 Cytochrome c oxidase subunit III AMJAP_RS16125 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMJAP_RS16130 PF00034 Cytochrome c AMJAP_RS16145 PF00912 Transglycosylase AMJAP_RS16145 PF00905 Penicillin binding protein transpeptidase domain AMJAP_RS16145 PF14814 Bifunctional transglycosylase second domain AMJAP_RS16155 PF00005 ABC transporter AMJAP_RS16160 PF01032 FecCD transport family AMJAP_RS16165 PF03544 Gram-negative bacterial TonB protein C-terminal AMJAP_RS16175 PF03749 Sugar fermentation stimulation protein RE domain AMJAP_RS16175 PF17746 SfsA N-terminal OB domain AMJAP_RS16180 PF00155 Aminotransferase class I and II AMJAP_RS16185 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMJAP_RS16190 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMJAP_RS16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS16200 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS16205 PF00158 Sigma-54 interaction domain AMJAP_RS16205 PF00072 Response regulator receiver domain AMJAP_RS16205 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS16210 PF01743 Poly A polymerase head domain AMJAP_RS16210 PF12626 Polymerase A arginine-rich C-terminus AMJAP_RS16210 PF12627 Probable RNA and SrmB- binding site of polymerase A AMJAP_RS16215 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMJAP_RS16220 PF02548 Ketopantoate hydroxymethyltransferase AMJAP_RS16225 PF02569 Pantoate-beta-alanine ligase AMJAP_RS16230 PF00108 Thiolase, N-terminal domain AMJAP_RS16230 PF02803 Thiolase, C-terminal domain AMJAP_RS16240 PF00849 RNA pseudouridylate synthase AMJAP_RS16240 PF01479 S4 domain AMJAP_RS16245 PF05175 Methyltransferase small domain AMJAP_RS16245 PF08468 Methyltransferase small domain N-terminal AMJAP_RS16260 PF02683 Cytochrome C biogenesis protein transmembrane region AMJAP_RS16260 PF00578 AhpC/TSA family AMJAP_RS16260 PF17991 Thioredoxin like C-terminal domain AMJAP_RS16275 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMJAP_RS16275 PF01138 3' exoribonuclease family, domain 1 AMJAP_RS16275 PF03725 3' exoribonuclease family, domain 2 AMJAP_RS16275 PF00013 KH domain AMJAP_RS16275 PF00575 S1 RNA binding domain AMJAP_RS16280 PF00312 Ribosomal protein S15 AMJAP_RS16285 PF09157 Pseudouridine synthase II TruB, C-terminal AMJAP_RS16285 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMJAP_RS16285 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMJAP_RS16290 PF02033 Ribosome-binding factor A AMJAP_RS16295 PF04760 Translation initiation factor IF-2, N-terminal region AMJAP_RS16295 PF08364 Bacterial translation initiation factor IF-2 associated region AMJAP_RS16295 PF11987 Translation-initiation factor 2 AMJAP_RS16295 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS16300 PF00575 S1 RNA binding domain AMJAP_RS16300 PF08529 NusA N-terminal domain AMJAP_RS16300 PF13184 NusA-like KH domain AMJAP_RS16305 PF17384 RimP C-terminal SH3 domain AMJAP_RS16305 PF02576 RimP N-terminal domain AMJAP_RS16320 PF03840 Preprotein translocase SecG subunit AMJAP_RS16325 PF00121 Triosephosphate isomerase AMJAP_RS16330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMJAP_RS16330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMJAP_RS16330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMJAP_RS16330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMJAP_RS16335 PF00809 Pterin binding enzyme AMJAP_RS16340 PF17862 AAA+ lid domain AMJAP_RS16340 PF01434 Peptidase family M41 AMJAP_RS16340 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS16340 PF06480 FtsH Extracellular AMJAP_RS16345 PF01728 FtsJ-like methyltransferase AMJAP_RS16350 PF01985 CRS1 / YhbY (CRM) domain AMJAP_RS16355 PF01272 Transcription elongation factor, GreA/GreB, C-term AMJAP_RS16355 PF03449 Transcription elongation factor, N-terminal AMJAP_RS16360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMJAP_RS16360 PF02142 MGS-like domain AMJAP_RS16360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMJAP_RS16365 PF00117 Glutamine amidotransferase class-I AMJAP_RS16365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMJAP_RS16400 PF10431 C-terminal, D2-small domain, of ClpB protein AMJAP_RS16400 PF07724 AAA domain (Cdc48 subfamily) AMJAP_RS16400 PF00004 ATPase family associated with various cellular activities (AAA) AMJAP_RS16400 PF17871 AAA lid domain AMJAP_RS16400 PF02861 Clp amino terminal domain, pathogenicity island component AMJAP_RS16410 PF07664 Ferrous iron transport protein B C terminus AMJAP_RS16410 PF17910 FeoB cytosolic helical domain AMJAP_RS16410 PF02421 Ferrous iron transport protein B AMJAP_RS16410 PF07670 Nucleoside recognition AMJAP_RS16410 PF04023 FeoA domain AMJAP_RS16420 PF02578 Multi-copper polyphenol oxidoreductase laccase AMJAP_RS16425 PF00849 RNA pseudouridylate synthase AMJAP_RS16425 PF01479 S4 domain AMJAP_RS16430 PF13525 Outer membrane lipoprotein AMJAP_RS16435 PF02540 NAD synthase AMJAP_RS16440 PF01266 FAD dependent oxidoreductase AMJAP_RS16445 PF07963 Prokaryotic N-terminal methylation motif AMJAP_RS16445 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMJAP_RS16450 PF05567 Neisseria PilC beta-propeller domain AMJAP_RS16475 PF07963 Prokaryotic N-terminal methylation motif AMJAP_RS16480 PF07963 Prokaryotic N-terminal methylation motif AMJAP_RS16480 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor AMJAP_RS16485 PF05567 Neisseria PilC beta-propeller domain AMJAP_RS16505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS16510 PF01252 Signal peptidase (SPase) II AMJAP_RS16515 PF06827 Zinc finger found in FPG and IleRS AMJAP_RS16515 PF00133 tRNA synthetases class I (I, L, M and V) AMJAP_RS16515 PF08264 Anticodon-binding domain of tRNA AMJAP_RS16520 PF06574 FAD synthetase AMJAP_RS16520 PF01687 Riboflavin kinase AMJAP_RS16525 PF03023 Lipid II flippase MurJ AMJAP_RS16530 PF01649 Ribosomal protein S20 AMJAP_RS16535 PF00696 Amino acid kinase family AMJAP_RS16535 PF01472 PUA domain AMJAP_RS16540 PF01018 GTP1/OBG AMJAP_RS16540 PF01926 50S ribosome-binding GTPase AMJAP_RS16545 PF01016 Ribosomal L27 protein AMJAP_RS16550 PF00829 Ribosomal prokaryotic L21 protein AMJAP_RS16555 PF00348 Polyprenyl synthetase AMJAP_RS16560 PF07977 FabA-like domain AMJAP_RS16565 PF02801 Beta-ketoacyl synthase, C-terminal domain AMJAP_RS16565 PF00109 Beta-ketoacyl synthase, N-terminal domain AMJAP_RS16575 PF01967 MoaC family AMJAP_RS16585 PF04055 Radical SAM superfamily AMJAP_RS16585 PF06463 Molybdenum Cofactor Synthesis C AMJAP_RS16595 PF04321 RmlD substrate binding domain AMJAP_RS16605 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS16605 PF03707 Bacterial signalling protein N terminal repeat AMJAP_RS16605 PF00563 EAL domain AMJAP_RS16610 PF00436 Single-strand binding protein family AMJAP_RS16615 PF17755 UvrA DNA-binding domain AMJAP_RS16615 PF17760 UvrA interaction domain AMJAP_RS16620 PF01196 Ribosomal protein L17 AMJAP_RS16625 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMJAP_RS16625 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMJAP_RS16625 PF01000 RNA polymerase Rpb3/RpoA insert domain AMJAP_RS16630 PF01479 S4 domain AMJAP_RS16630 PF00163 Ribosomal protein S4/S9 N-terminal domain AMJAP_RS16635 PF00411 Ribosomal protein S11 AMJAP_RS16640 PF00416 Ribosomal protein S13/S18 AMJAP_RS16645 PF00444 Ribosomal protein L36 AMJAP_RS16650 PF00344 SecY translocase AMJAP_RS16655 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMJAP_RS16660 PF00327 Ribosomal protein L30p/L7e AMJAP_RS16665 PF00333 Ribosomal protein S5, N-terminal domain AMJAP_RS16665 PF03719 Ribosomal protein S5, C-terminal domain AMJAP_RS16670 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMJAP_RS16675 PF00347 Ribosomal protein L6 AMJAP_RS16680 PF00410 Ribosomal protein S8 AMJAP_RS16685 PF00253 Ribosomal protein S14p/S29e AMJAP_RS16690 PF00673 ribosomal L5P family C-terminus AMJAP_RS16690 PF00281 Ribosomal protein L5 AMJAP_RS16695 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMJAP_RS16695 PF00467 KOW motif AMJAP_RS16700 PF00238 Ribosomal protein L14p/L23e AMJAP_RS16705 PF00366 Ribosomal protein S17 AMJAP_RS16710 PF00831 Ribosomal L29 protein AMJAP_RS16715 PF00252 Ribosomal protein L16p/L10e AMJAP_RS16720 PF00189 Ribosomal protein S3, C-terminal domain AMJAP_RS16720 PF07650 KH domain AMJAP_RS16725 PF00237 Ribosomal protein L22p/L17e AMJAP_RS16730 PF00203 Ribosomal protein S19 AMJAP_RS16735 PF03947 Ribosomal Proteins L2, C-terminal domain AMJAP_RS16735 PF00181 Ribosomal Proteins L2, RNA binding domain AMJAP_RS16740 PF00276 Ribosomal protein L23 AMJAP_RS16745 PF00573 Ribosomal protein L4/L1 family AMJAP_RS16750 PF00297 Ribosomal protein L3 AMJAP_RS16755 PF00338 Ribosomal protein S10p/S20e AMJAP_RS16760 PF03143 Elongation factor Tu C-terminal domain AMJAP_RS16760 PF03144 Elongation factor Tu domain 2 AMJAP_RS16760 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS16765 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS16765 PF03764 Elongation factor G, domain IV AMJAP_RS16765 PF00679 Elongation factor G C-terminus AMJAP_RS16765 PF14492 Elongation Factor G, domain II AMJAP_RS16765 PF03144 Elongation factor Tu domain 2 AMJAP_RS16770 PF00177 Ribosomal protein S7p/S5e AMJAP_RS16775 PF00164 Ribosomal protein S12/S23 AMJAP_RS16780 PF05000 RNA polymerase Rpb1, domain 4 AMJAP_RS16780 PF04998 RNA polymerase Rpb1, domain 5 AMJAP_RS16780 PF04983 RNA polymerase Rpb1, domain 3 AMJAP_RS16780 PF00623 RNA polymerase Rpb1, domain 2 AMJAP_RS16780 PF04997 RNA polymerase Rpb1, domain 1 AMJAP_RS16785 PF04560 RNA polymerase Rpb2, domain 7 AMJAP_RS16785 PF04565 RNA polymerase Rpb2, domain 3 AMJAP_RS16785 PF04561 RNA polymerase Rpb2, domain 2 AMJAP_RS16785 PF10385 RNA polymerase beta subunit external 1 domain AMJAP_RS16785 PF04563 RNA polymerase beta subunit AMJAP_RS16785 PF00562 RNA polymerase Rpb2, domain 6 AMJAP_RS16790 PF00542 Ribosomal protein L7/L12 C-terminal domain AMJAP_RS16790 PF16320 Ribosomal protein L7/L12 dimerisation domain AMJAP_RS16795 PF00466 Ribosomal protein L10 AMJAP_RS16800 PF00687 Ribosomal protein L1p/L10e family AMJAP_RS16805 PF03946 Ribosomal protein L11, N-terminal domain AMJAP_RS16805 PF00298 Ribosomal protein L11, RNA binding domain AMJAP_RS16810 PF02357 Transcription termination factor nusG AMJAP_RS16810 PF00467 KOW motif AMJAP_RS16815 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMJAP_RS16825 PF03143 Elongation factor Tu C-terminal domain AMJAP_RS16825 PF00009 Elongation factor Tu GTP binding domain AMJAP_RS16825 PF03144 Elongation factor Tu domain 2 AMJAP_RS16855 PF03309 Type III pantothenate kinase AMJAP_RS16860 PF02237 Biotin protein ligase C terminal domain AMJAP_RS16860 PF03099 Biotin/lipoate A/B protein ligase family AMJAP_RS16860 PF08279 HTH domain AMJAP_RS16865 PF00186 Dihydrofolate reductase AMJAP_RS16870 PF00303 Thymidylate synthase AMJAP_RS16875 PF00293 NUDIX domain AMJAP_RS16880 PF01790 Prolipoprotein diacylglyceryl transferase AMJAP_RS16890 PF02896 PEP-utilising enzyme, TIM barrel domain AMJAP_RS16890 PF05524 PEP-utilising enzyme, N-terminal AMJAP_RS16890 PF01590 GAF domain AMJAP_RS16890 PF00391 PEP-utilising enzyme, mobile domain AMJAP_RS16895 PF00293 NUDIX domain AMJAP_RS16910 PF00248 Aldo/keto reductase family AMJAP_RS16915 PF17785 PUA-like domain AMJAP_RS16915 PF10672 S-adenosylmethionine-dependent methyltransferase AMJAP_RS16920 PF01597 Glycine cleavage H-protein AMJAP_RS16925 PF01571 Aminomethyltransferase folate-binding domain AMJAP_RS16925 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMJAP_RS16930 PF01494 FAD binding domain AMJAP_RS16935 PF01494 FAD binding domain AMJAP_RS16940 PF00557 Metallopeptidase family M24 AMJAP_RS16940 PF05195 Aminopeptidase P, N-terminal domain AMJAP_RS16945 PF03695 Uncharacterised protein family (UPF0149) AMJAP_RS16955 PF05164 Cell division protein ZapA AMJAP_RS16965 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMJAP_RS16980 PF00206 Lyase AMJAP_RS16980 PF14698 Argininosuccinate lyase C-terminal AMJAP_RS16985 PF03900 Porphobilinogen deaminase, C-terminal domain AMJAP_RS16985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMJAP_RS16990 PF02602 Uroporphyrinogen-III synthase HemD AMJAP_RS16995 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AMJAP_RS17000 PF07219 HemY protein N-terminus AMJAP_RS17000 PF07719 Tetratricopeptide repeat AMJAP_RS17015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMJAP_RS17020 PF07498 Rho termination factor, N-terminal domain AMJAP_RS17020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMJAP_RS17020 PF07497 Rho termination factor, RNA-binding domain AMJAP_RS17025 PF00085 Thioredoxin AMJAP_RS17030 PF02541 Ppx/GppA phosphatase family AMJAP_RS17035 PF01293 Phosphoenolpyruvate carboxykinase AMJAP_RS17040 PF01430 Hsp33 protein AMJAP_RS17045 PF01479 S4 domain AMJAP_RS17050 PF13419 Haloacid dehalogenase-like hydrolase AMJAP_RS17055 PF00293 NUDIX domain AMJAP_RS17060 PF00459 Inositol monophosphatase family AMJAP_RS17070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMJAP_RS17070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMJAP_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS17075 PF05231 MASE1 AMJAP_RS17075 PF07730 Histidine kinase AMJAP_RS17080 PF13472 GDSL-like Lipase/Acylhydrolase family AMJAP_RS17085 PF00005 ABC transporter AMJAP_RS17100 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMJAP_RS17105 PF00585 C-terminal regulatory domain of Threonine dehydratase AMJAP_RS17105 PF00291 Pyridoxal-phosphate dependent enzyme AMJAP_RS17145 PF00158 Sigma-54 interaction domain AMJAP_RS17145 PF00072 Response regulator receiver domain AMJAP_RS17145 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS17150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS17155 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AMJAP_RS17160 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS17165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS17165 PF00672 HAMP domain AMJAP_RS17170 PF00072 Response regulator receiver domain AMJAP_RS17170 PF00158 Sigma-54 interaction domain AMJAP_RS17170 PF02954 Bacterial regulatory protein, Fis family AMJAP_RS17175 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS17175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS17175 PF02743 Cache domain AMJAP_RS17180 PF00224 Pyruvate kinase, barrel domain AMJAP_RS17180 PF02887 Pyruvate kinase, alpha/beta domain AMJAP_RS17185 PF04262 Glutamate-cysteine ligase AMJAP_RS17195 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AMJAP_RS17205 PF00563 EAL domain AMJAP_RS17205 PF01590 GAF domain AMJAP_RS17205 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS17205 PF00360 Phytochrome region AMJAP_RS17215 PF00005 ABC transporter AMJAP_RS17220 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS17225 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS17230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMJAP_RS17235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMJAP_RS17235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AMJAP_RS17245 PF12848 ABC transporter AMJAP_RS17245 PF00005 ABC transporter AMJAP_RS17265 PF00072 Response regulator receiver domain AMJAP_RS17265 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS17270 PF02560 Cyanate lyase C-terminal domain AMJAP_RS17275 PF00069 Protein kinase domain AMJAP_RS17275 PF03793 PASTA domain AMJAP_RS17290 PF00156 Phosphoribosyl transferase domain AMJAP_RS17295 PF03372 Endonuclease/Exonuclease/phosphatase family AMJAP_RS17300 PF01138 3' exoribonuclease family, domain 1 AMJAP_RS17300 PF03725 3' exoribonuclease family, domain 2 AMJAP_RS17305 PF08340 Domain of unknown function (DUF1732) AMJAP_RS17305 PF03755 YicC-like family, N-terminal region AMJAP_RS17310 PF00625 Guanylate kinase AMJAP_RS17315 PF01192 RNA polymerase Rpb6 AMJAP_RS17320 PF02824 TGS domain AMJAP_RS17320 PF04607 Region found in RelA / SpoT proteins AMJAP_RS17320 PF13291 ACT domain AMJAP_RS17345 PF00902 Sec-independent protein translocase protein (TatC) AMJAP_RS17350 PF02416 mttA/Hcf106 family AMJAP_RS17355 PF02416 mttA/Hcf106 family AMJAP_RS17360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMJAP_RS17365 PF01502 Phosphoribosyl-AMP cyclohydrolase AMJAP_RS17370 PF03109 ABC1 family AMJAP_RS17375 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS17385 PF00034 Cytochrome c AMJAP_RS17390 PF01926 50S ribosome-binding GTPase AMJAP_RS17395 PF00476 DNA polymerase family A AMJAP_RS17395 PF01367 5'-3' exonuclease, C-terminal SAM fold AMJAP_RS17395 PF01612 3'-5' exonuclease AMJAP_RS17395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMJAP_RS17405 PF01636 Phosphotransferase enzyme family AMJAP_RS17410 PF13361 UvrD-like helicase C-terminal domain AMJAP_RS17410 PF00580 UvrD/REP helicase N-terminal domain AMJAP_RS17415 PF07670 Nucleoside recognition AMJAP_RS17425 PF12849 PBP superfamily domain AMJAP_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component AMJAP_RS17440 PF00005 ABC transporter AMJAP_RS17445 PF01895 PhoU domain AMJAP_RS17455 PF00990 Diguanylate cyclase, GGDEF domain AMJAP_RS17455 PF01590 GAF domain AMJAP_RS17455 PF00563 EAL domain AMJAP_RS17455 PF00360 Phytochrome region AMJAP_RS17465 PF04345 Chorismate lyase AMJAP_RS17470 PF01040 UbiA prenyltransferase family AMJAP_RS17475 PF00072 Response regulator receiver domain AMJAP_RS17475 PF00486 Transcriptional regulatory protein, C terminal AMJAP_RS17480 PF00989 PAS fold AMJAP_RS17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS17480 PF00512 His Kinase A (phospho-acceptor) domain AMJAP_RS17480 PF11808 Phosphate regulon sensor protein PhoR AMJAP_RS17495 PF14765 Polyketide synthase dehydratase AMJAP_RS17495 PF16197 Ketoacyl-synthetase C-terminal extension AMJAP_RS17495 PF08240 Alcohol dehydrogenase GroES-like domain AMJAP_RS17495 PF08990 Erythronolide synthase docking AMJAP_RS17495 PF08659 KR domain AMJAP_RS17495 PF02801 Beta-ketoacyl synthase, C-terminal domain AMJAP_RS17495 PF00109 Beta-ketoacyl synthase, N-terminal domain AMJAP_RS17495 PF00698 Acyl transferase domain AMJAP_RS17495 PF00550 Phosphopantetheine attachment site AMJAP_RS17505 PF01627 Hpt domain AMJAP_RS17505 PF01584 CheW-like domain AMJAP_RS17505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMJAP_RS17505 PF00072 Response regulator receiver domain AMJAP_RS17510 PF00672 HAMP domain AMJAP_RS17510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_RS17510 PF12729 Four helix bundle sensory module for signal transduction AMJAP_RS17520 PF00072 Response regulator receiver domain AMJAP_RS17525 PF00072 Response regulator receiver domain AMJAP_RS17550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMJAP_RS17570 PF03480 Bacterial extracellular solute-binding protein, family 7 AMJAP_RS17575 PF01418 Helix-turn-helix domain, rpiR family AMJAP_RS17575 PF01380 SIS domain AMJAP_RS17575 PF02685 Glucokinase AMJAP_RS17585 PF01645 Conserved region in glutamate synthase AMJAP_RS17600 PF01380 SIS domain AMJAP_RS17605 PF00132 Bacterial transferase hexapeptide (six repeats) AMJAP_RS17605 PF12804 MobA-like NTP transferase domain AMJAP_RS17605 PF14602 Hexapeptide repeat of succinyl-transferase AMJAP_RS17615 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AMJAP_RS17615 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMJAP_RS17620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMJAP_RS17620 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMJAP_RS17625 PF00231 ATP synthase AMJAP_RS17630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMJAP_RS17630 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMJAP_RS17630 PF00306 ATP synthase alpha/beta chain, C terminal domain AMJAP_RS17635 PF00213 ATP synthase delta (OSCP) subunit AMJAP_RS17640 PF00430 ATP synthase B/B' CF(0) AMJAP_RS17645 PF00137 ATP synthase subunit C AMJAP_RS17650 PF00119 ATP synthase A chain AMJAP_RS17660 PF17762 HTH domain found in ParB protein AMJAP_RS17660 PF02195 ParB-like nuclease domain AMJAP_RS17665 PF13614 AAA domain AMJAP_RS17670 PF02527 rRNA small subunit methyltransferase G AMJAP_RS17675 PF01134 Glucose inhibited division protein A AMJAP_RS17675 PF13932 GidA associated domain AMJAP_RS17680 PF00085 Thioredoxin AMJAP_RS17685 PF10396 GTP-binding protein TrmE N-terminus AMJAP_RS17685 PF12631 MnmE helical domain AMJAP_RS17685 PF01926 50S ribosome-binding GTPase AMJAP_RS17690 PF02096 60Kd inner membrane protein AMJAP_RS17690 PF14849 YidC periplasmic domain AMJAP_RS17695 PF00825 Ribonuclease P AMJAP_RS17700 PF00468 Ribosomal protein L34