locus-tag class description AMED_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AMED_0001 IPR020591 Chromosomal replication control, initiator DnaA-like AMED_0001 IPR013317 Chromosomal replication initiator protein DnaA AMED_0001 IPR001957 Chromosomal replication control, initiator DnaA AMED_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0001 IPR003593 AAA+ ATPase domain AMED_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal AMED_0001 IPR010921 Trp repressor/replication initiator AMED_0002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal AMED_0002 IPR001001 DNA polymerase III, beta sliding clamp AMED_0002 IPR022637 DNA polymerase III, beta sliding clamp, central AMED_0002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal AMED_0003 IPR006114 6-phosphogluconate dehydrogenase, C-terminal AMED_0003 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_0003 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type AMED_0003 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_0003 IPR006183 6-phosphogluconate dehydrogenase AMED_0003 IPR036291 NAD(P)-binding domain superfamily AMED_0003 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_0004 IPR001238 DNA-binding, RecF AMED_0004 IPR018078 DNA-binding, RecF, conserved site AMED_0004 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0004 IPR003395 RecF/RecN/SMC, N-terminal AMED_0004 IPR042174 DNA-binding RecF, domain 2 AMED_0005 IPR023007 Uncharacterised protein family UPF0232, actinobacteria AMED_0005 IPR007922 Protein of unknown function DUF721/UPF0232 AMED_0006 IPR002288 DNA gyrase B subunit, C-terminal AMED_0006 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_0006 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_0006 IPR001241 DNA topoisomerase, type IIA AMED_0006 IPR006171 TOPRIM domain AMED_0006 IPR011557 DNA gyrase, subunit B AMED_0006 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMED_0006 IPR018522 DNA topoisomerase, type IIA, conserved site AMED_0006 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AMED_0006 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AMED_0006 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0006 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0007 IPR005743 DNA gyrase, subunit A AMED_0007 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMED_0007 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AMED_0007 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMED_0007 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AMED_0007 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AMED_0007 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AMED_0008 IPR021949 Domain of unknown function DUF3566. transmembrane AMED_0010 IPR010998 Integrase/recombinase, N-terminal AMED_0010 IPR002104 Integrase, catalytic domain AMED_0010 IPR013762 Integrase-like, catalytic domain superfamily AMED_0010 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_0025 IPR003593 AAA+ ATPase domain AMED_0025 IPR003439 ABC transporter-like AMED_0025 IPR017871 ABC transporter, conserved site AMED_0025 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_0025 IPR025302 Domain of unknown function DUF4162 AMED_0025 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0026 IPR000412 ABC-2 transporter AMED_0026 IPR013525 ABC-2 type transporter AMED_0027 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0027 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0027 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0027 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0027 IPR000792 Transcription regulator LuxR, C-terminal AMED_0028 IPR017972 Cytochrome P450, conserved site AMED_0028 IPR001128 Cytochrome P450 AMED_0028 IPR002397 Cytochrome P450, B-class AMED_0028 IPR036396 Cytochrome P450 superfamily AMED_0029 IPR000073 Alpha/beta hydrolase fold-1 AMED_0029 IPR029058 Alpha/Beta hydrolase fold AMED_0030 IPR000659 Pyridoxamine 5'-phosphate oxidase AMED_0030 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AMED_0030 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AMED_0030 IPR012349 FMN-binding split barrel AMED_0030 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_0035 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AMED_0035 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMED_0035 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AMED_0035 IPR029000 Cyclophilin-like domain superfamily AMED_0036 IPR022764 Peptidase S54, rhomboid domain AMED_0036 IPR035952 Rhomboid-like superfamily AMED_0036 IPR013026 Tetratricopeptide repeat-containing domain AMED_0036 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0036 IPR019734 Tetratricopeptide repeat AMED_0038 IPR009619 Cell division protein CrgA AMED_0039 IPR042003 Sortase E AMED_0039 IPR005754 Sortase family AMED_0039 IPR023365 Sortase domain superfamily AMED_0043 IPR003439 ABC transporter-like AMED_0043 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0043 IPR005978 Nodulation ABC transporter, NodI AMED_0043 IPR015851 ABC transporter, NodI AMED_0043 IPR017871 ABC transporter, conserved site AMED_0043 IPR003593 AAA+ ATPase domain AMED_0045 IPR011006 CheY-like superfamily AMED_0045 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0045 IPR001789 Signal transduction response regulator, receiver domain AMED_0045 IPR000792 Transcription regulator LuxR, C-terminal AMED_0046 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type AMED_0046 IPR023753 FAD/NAD(P)-binding domain AMED_0046 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0047 IPR029062 Class I glutamine amidotransferase-like AMED_0047 IPR017926 Glutamine amidotransferase AMED_0047 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AMED_0048 IPR003593 AAA+ ATPase domain AMED_0048 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0048 IPR003439 ABC transporter-like AMED_0048 IPR017871 ABC transporter, conserved site AMED_0051 IPR000719 Protein kinase domain AMED_0051 IPR005543 PASTA domain AMED_0051 IPR017441 Protein kinase, ATP binding site AMED_0051 IPR008271 Serine/threonine-protein kinase, active site AMED_0051 IPR011009 Protein kinase-like domain superfamily AMED_0052 IPR000719 Protein kinase domain AMED_0052 IPR008271 Serine/threonine-protein kinase, active site AMED_0052 IPR011009 Protein kinase-like domain superfamily AMED_0053 IPR001460 Penicillin-binding protein, transpeptidase AMED_0053 IPR012338 Beta-lactamase/transpeptidase-like AMED_0054 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AMED_0054 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AMED_0055 IPR001932 PPM-type phosphatase domain AMED_0055 IPR036457 PPM-type phosphatase domain superfamily AMED_0055 IPR015655 Protein phosphatase 2C family AMED_0056 IPR000253 Forkhead-associated (FHA) domain AMED_0056 IPR008984 SMAD/FHA domain superfamily AMED_0056 IPR032030 YscD, cytoplasmic domain AMED_0057 IPR022128 Domain of unknown function DUF3662 AMED_0057 IPR042287 FhaA, N-terminal AMED_0057 IPR008984 SMAD/FHA domain superfamily AMED_0057 IPR000253 Forkhead-associated (FHA) domain AMED_0060 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMED_0062 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0062 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMED_0062 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0062 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0066 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_0066 IPR023730 HTH-type transcriptional repressor NanR AMED_0066 IPR036390 Winged helix DNA-binding domain superfamily AMED_0066 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0066 IPR000524 Transcription regulator HTH, GntR AMED_0066 IPR011711 GntR, C-terminal AMED_0067 IPR011980 Nickel ABC transporter, substrate-binding protein NikA AMED_0067 IPR030678 Peptide/nickel binding protein, MppA-type AMED_0067 IPR023765 Solute-binding protein family 5, conserved site AMED_0067 IPR000914 Solute-binding protein family 5 domain AMED_0067 IPR039424 Solute-binding protein family 5 AMED_0068 IPR035906 MetI-like superfamily AMED_0068 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0069 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMED_0069 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0069 IPR035906 MetI-like superfamily AMED_0070 IPR017871 ABC transporter, conserved site AMED_0070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0070 IPR003593 AAA+ ATPase domain AMED_0070 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_0070 IPR003439 ABC transporter-like AMED_0071 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0071 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_0071 IPR017871 ABC transporter, conserved site AMED_0071 IPR003593 AAA+ ATPase domain AMED_0071 IPR003439 ABC transporter-like AMED_0072 IPR017656 Putative phosphonoacetaldehyde dehydrogenase AMED_0072 IPR015590 Aldehyde dehydrogenase domain AMED_0072 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_0072 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_0072 IPR016161 Aldehyde/histidinol dehydrogenase AMED_0072 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_0072 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_0073 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0073 IPR036291 NAD(P)-binding domain superfamily AMED_0073 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_0073 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0074 IPR020556 Amidase, conserved site AMED_0074 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMED_0074 IPR036928 Amidase signature (AS) superfamily AMED_0074 IPR000120 Amidase AMED_0074 IPR023631 Amidase signature domain AMED_0075 IPR003346 Transposase, IS116/IS110/IS902 AMED_0075 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal AMED_0078 IPR011206 Citrate lyase beta subunit-like AMED_0078 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_0078 IPR040442 Pyruvate kinase-like domain superfamily AMED_0078 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AMED_0079 IPR040442 Pyruvate kinase-like domain superfamily AMED_0079 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_0079 IPR011206 Citrate lyase beta subunit-like AMED_0079 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AMED_0081 IPR036291 NAD(P)-binding domain superfamily AMED_0081 IPR016040 NAD(P)-binding domain AMED_0082 IPR005946 Ribose-phosphate pyrophosphokinase AMED_0082 IPR029057 Phosphoribosyltransferase-like AMED_0082 IPR000836 Phosphoribosyltransferase domain AMED_0082 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AMED_0083 IPR006094 FAD linked oxidase, N-terminal AMED_0083 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMED_0083 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase AMED_0083 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_0083 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_0083 IPR036318 FAD-binding, type PCMH-like superfamily AMED_0083 IPR016166 FAD-binding domain, PCMH-type AMED_0083 IPR007173 D-arabinono-1,4-lactone oxidase AMED_0083 IPR006093 Oxygen oxidoreductase covalent FAD-binding site AMED_0085 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_0085 IPR009057 Homeobox-like domain superfamily AMED_0085 IPR001647 DNA-binding HTH domain, TetR-type AMED_0085 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_0085 IPR039538 BetI-type transcriptional repressor, C-terminal AMED_0085 IPR017757 Transcriptional repressor BetI AMED_0086 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMED_0086 IPR001360 Glycoside hydrolase family 1 AMED_0086 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase AMED_0086 IPR018120 Glycoside hydrolase family 1, active site AMED_0086 IPR017853 Glycoside hydrolase superfamily AMED_0087 IPR036259 MFS transporter superfamily AMED_0087 IPR039672 Lactose permease-like AMED_0087 IPR018043 Sodium:galactoside symporter, conserved site AMED_0093 IPR032694 Copper transport protein C/D AMED_0093 IPR007348 CopC domain AMED_0093 IPR008457 Copper resistance protein D AMED_0093 IPR014756 Immunoglobulin E-set AMED_0093 IPR032693 YtkA-like domain AMED_0096 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0096 IPR035906 MetI-like superfamily AMED_0097 IPR003593 AAA+ ATPase domain AMED_0097 IPR003439 ABC transporter-like AMED_0097 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0097 IPR000644 CBS domain AMED_0097 IPR017871 ABC transporter, conserved site AMED_0097 IPR005892 Glycine betaine transport ATP-binding subunit AMED_0098 IPR035906 MetI-like superfamily AMED_0098 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0099 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AMED_0103 IPR004033 UbiE/COQ5 methyltransferase AMED_0103 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_0103 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0104 IPR036291 NAD(P)-binding domain superfamily AMED_0104 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0104 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0105 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMED_0105 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMED_0105 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMED_0105 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMED_0105 IPR036291 NAD(P)-binding domain superfamily AMED_0105 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AMED_0105 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_0105 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMED_0106 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_0106 IPR000101 Gamma-glutamyltranspeptidase AMED_0108 IPR032806 H repeat-associated protein, N-terminal AMED_0108 IPR002559 Transposase, IS4-like AMED_0111 IPR011701 Major facilitator superfamily AMED_0111 IPR020846 Major facilitator superfamily domain AMED_0111 IPR036259 MFS transporter superfamily AMED_0113 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0113 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_0114 IPR000792 Transcription regulator LuxR, C-terminal AMED_0114 IPR001789 Signal transduction response regulator, receiver domain AMED_0114 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0114 IPR011006 CheY-like superfamily AMED_0115 IPR006368 GDP-mannose 4,6-dehydratase AMED_0115 IPR036291 NAD(P)-binding domain superfamily AMED_0115 IPR016040 NAD(P)-binding domain AMED_0120 IPR001296 Glycosyl transferase, family 1 AMED_0130 IPR010979 Ribosomal protein S13-like, H2TH AMED_0130 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMED_0130 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMED_0130 IPR010663 Zinc finger, FPG/IleRS-type AMED_0131 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0131 IPR003018 GAF domain AMED_0131 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AMED_0131 IPR010559 Signal transduction histidine kinase, internal region AMED_0132 IPR029045 ClpP/crotonase-like domain superfamily AMED_0132 IPR023171 Na/H antiporter domain superfamily AMED_0132 IPR004670 Na+/H+ antiporter NhaA AMED_0132 IPR002142 Peptidase S49 AMED_0134 IPR001789 Signal transduction response regulator, receiver domain AMED_0134 IPR011006 CheY-like superfamily AMED_0134 IPR007492 LytTR DNA-binding domain AMED_0136 IPR038377 Sodium/glucose symporter superfamily AMED_0136 IPR001734 Sodium/solute symporter AMED_0137 IPR001763 Rhodanese-like domain AMED_0137 IPR036873 Rhodanese-like domain superfamily AMED_0137 IPR036868 TusA-like domain superfamily AMED_0137 IPR001455 TusA-like domain AMED_0140 IPR020846 Major facilitator superfamily domain AMED_0140 IPR011701 Major facilitator superfamily AMED_0140 IPR036259 MFS transporter superfamily AMED_0140 IPR023721 Multidrug resistance protein MdtD AMED_0141 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_0141 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_0141 IPR017811 Mycothiol S-conjugate amidase Mca AMED_0142 IPR036396 Cytochrome P450 superfamily AMED_0142 IPR017972 Cytochrome P450, conserved site AMED_0142 IPR002397 Cytochrome P450, B-class AMED_0142 IPR001128 Cytochrome P450 AMED_0145 IPR000943 RNA polymerase sigma-70 AMED_0145 IPR007627 RNA polymerase sigma-70 region 2 AMED_0145 IPR007624 RNA polymerase sigma-70 region 3 AMED_0145 IPR007630 RNA polymerase sigma-70 region 4 AMED_0145 IPR013325 RNA polymerase sigma factor, region 2 AMED_0145 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0145 IPR014284 RNA polymerase sigma-70 like domain AMED_0145 IPR012845 RNA polymerase sigma factor, FliA/WhiG AMED_0147 IPR001519 Ferritin AMED_0147 IPR041719 Ferritin, prokaryotic-type AMED_0147 IPR008331 Ferritin/DPS protein domain AMED_0147 IPR009078 Ferritin-like superfamily AMED_0147 IPR009040 Ferritin-like diiron domain AMED_0147 IPR012347 Ferritin-like AMED_0148 IPR003876 Arginine deiminase AMED_0163 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AMED_0164 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AMED_0165 IPR017871 ABC transporter, conserved site AMED_0165 IPR003439 ABC transporter-like AMED_0165 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_0165 IPR011527 ABC transporter type 1, transmembrane domain AMED_0165 IPR003593 AAA+ ATPase domain AMED_0165 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AMED_0165 IPR039421 Type I protein exporter AMED_0165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0166 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0166 IPR003018 GAF domain AMED_0166 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_0166 IPR029016 GAF-like domain superfamily AMED_0166 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0167 IPR011006 CheY-like superfamily AMED_0167 IPR000792 Transcription regulator LuxR, C-terminal AMED_0167 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0167 IPR001789 Signal transduction response regulator, receiver domain AMED_0176 IPR007527 Zinc finger, SWIM-type AMED_0179 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0179 IPR004566 Pantothenate kinase AMED_0179 IPR006083 Phosphoribulokinase/uridine kinase AMED_0180 IPR002589 Macro domain AMED_0181 IPR001086 Prephenate dehydratase AMED_0181 IPR018528 Prephenate dehydratase, conserved site AMED_0181 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AMED_0181 IPR002912 ACT domain AMED_0182 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_0182 IPR029033 Histidine phosphatase superfamily AMED_0189 IPR016185 Pre-ATP-grasp domain superfamily AMED_0189 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AMED_0191 IPR000073 Alpha/beta hydrolase fold-1 AMED_0191 IPR029058 Alpha/Beta hydrolase fold AMED_0191 IPR000639 Epoxide hydrolase-like AMED_0191 IPR023489 Haloalkane dehalogenase, subfamily 1 AMED_0192 IPR004636 Acetylornithine/Succinylornithine transaminase family AMED_0192 IPR005814 Aminotransferase class-III AMED_0192 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0192 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0192 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0193 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_0193 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMED_0193 IPR033729 Serine-tRNA ligase catalytic core domain AMED_0193 IPR002317 Serine-tRNA ligase, type1 AMED_0193 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMED_0193 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AMED_0193 IPR015866 Serine-tRNA synthetase, type1, N-terminal AMED_0195 IPR030862 L-2-hydroxyglutarate dehydrogenase AMED_0195 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0195 IPR006076 FAD dependent oxidoreductase AMED_0199 IPR000792 Transcription regulator LuxR, C-terminal AMED_0199 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0199 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0199 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0199 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0200 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB AMED_0200 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0200 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMED_0201 IPR005886 UDP-glucose 4-epimerase AMED_0201 IPR036291 NAD(P)-binding domain superfamily AMED_0201 IPR001509 NAD-dependent epimerase/dehydratase AMED_0203 IPR011004 Trimeric LpxA-like superfamily AMED_0203 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AMED_0203 IPR001451 Hexapeptide repeat AMED_0203 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AMED_0203 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AMED_0204 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_0204 IPR013325 RNA polymerase sigma factor, region 2 AMED_0204 IPR007630 RNA polymerase sigma-70 region 4 AMED_0204 IPR039425 RNA polymerase sigma-70 like AMED_0204 IPR007627 RNA polymerase sigma-70 region 2 AMED_0204 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0204 IPR014284 RNA polymerase sigma-70 like domain AMED_0204 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0206 IPR012189 Peptidase M28E, aminopeptidase AP1 AMED_0206 IPR007484 Peptidase M28 AMED_0206 IPR007280 Peptidase, C-terminal, archaeal/bacterial AMED_0208 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMED_0208 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0208 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0208 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0209 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AMED_0209 IPR001451 Hexapeptide repeat AMED_0209 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AMED_0209 IPR011004 Trimeric LpxA-like superfamily AMED_0209 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AMED_0211 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0211 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0211 IPR036291 NAD(P)-binding domain superfamily AMED_0211 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_0212 IPR000873 AMP-dependent synthetase/ligase AMED_0212 IPR025110 AMP-binding enzyme, C-terminal domain AMED_0212 IPR020845 AMP-binding, conserved site AMED_0212 IPR042099 AMP-dependent synthetase-like superfamily AMED_0220 IPR002123 Phospholipid/glycerol acyltransferase AMED_0220 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AMED_0221 IPR023214 HAD superfamily AMED_0221 IPR000150 Cof family AMED_0221 IPR036412 HAD-like superfamily AMED_0221 IPR006379 HAD-superfamily hydrolase, subfamily IIB AMED_0222 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_0222 IPR011251 Luciferase-like domain AMED_0222 IPR036661 Luciferase-like domain superfamily AMED_0224 IPR015899 UDP-galactopyranose mutase, C-terminal AMED_0224 IPR004379 UDP-galactopyranose mutase AMED_0225 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMED_0225 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMED_0226 IPR000537 UbiA prenyltransferase family AMED_0226 IPR039653 Prenyltransferase AMED_0229 IPR036291 NAD(P)-binding domain superfamily AMED_0229 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0229 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0230 IPR006094 FAD linked oxidase, N-terminal AMED_0230 IPR016166 FAD-binding domain, PCMH-type AMED_0230 IPR036318 FAD-binding, type PCMH-like superfamily AMED_0230 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_0230 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_0230 IPR007173 D-arabinono-1,4-lactone oxidase AMED_0231 IPR007267 GtrA-like protein AMED_0232 IPR029044 Nucleotide-diphospho-sugar transferases AMED_0232 IPR040492 Galactofuranosyltransferase GlfT2, N-terminal AMED_0238 IPR029044 Nucleotide-diphospho-sugar transferases AMED_0239 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0239 IPR003439 ABC transporter-like AMED_0239 IPR003593 AAA+ ATPase domain AMED_0240 IPR013525 ABC-2 type transporter AMED_0241 IPR019695 Bacterial proteasome activator AMED_0242 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0242 IPR011340 Cysteine desulfurase-related AMED_0242 IPR000192 Aminotransferase class V domain AMED_0242 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0242 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0243 IPR013149 Alcohol dehydrogenase, C-terminal AMED_0243 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0243 IPR013968 Polyketide synthase, ketoreductase domain AMED_0243 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0243 IPR001227 Acyl transferase domain superfamily AMED_0243 IPR036736 ACP-like superfamily AMED_0243 IPR020807 Polyketide synthase, dehydratase domain AMED_0243 IPR014043 Acyl transferase AMED_0243 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0243 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0243 IPR011032 GroES-like superfamily AMED_0243 IPR018201 Beta-ketoacyl synthase, active site AMED_0243 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0243 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0243 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0243 IPR036291 NAD(P)-binding domain superfamily AMED_0243 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0243 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0243 IPR009081 Phosphopantetheine binding ACP domain AMED_0243 IPR016039 Thiolase-like AMED_0243 IPR020843 Polyketide synthase, enoylreductase domain AMED_0244 IPR007484 Peptidase M28 AMED_0244 IPR003137 PA domain AMED_0244 IPR041756 Peptidase M28, SGAP-like AMED_0245 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMED_0253 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0253 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0253 IPR036291 NAD(P)-binding domain superfamily AMED_0255 IPR024187 Signal transduction response regulator, citrate/malate metabolism AMED_0255 IPR001789 Signal transduction response regulator, receiver domain AMED_0255 IPR036390 Winged helix DNA-binding domain superfamily AMED_0255 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0255 IPR011006 CheY-like superfamily AMED_0256 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0256 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0256 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_0256 IPR013767 PAS fold AMED_0256 IPR005467 Histidine kinase domain AMED_0256 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AMED_0256 IPR035965 PAS domain superfamily AMED_0256 IPR029151 Periplasmic sensor-like domain superfamily AMED_0256 IPR033463 Single cache domain 3 AMED_0256 IPR000014 PAS domain AMED_0256 IPR039506 SpoOB, alpha-helical domain AMED_0257 IPR017871 ABC transporter, conserved site AMED_0257 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0257 IPR003593 AAA+ ATPase domain AMED_0257 IPR003439 ABC transporter-like AMED_0262 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMED_0262 IPR029787 Nucleotide cyclase AMED_0262 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0262 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0262 IPR041664 Orc1-like, AAA ATPase domain AMED_0263 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_0263 IPR004236 Peptidase S1A, alpha-lytic prodomain AMED_0263 IPR001316 Peptidase S1A, streptogrisin AMED_0263 IPR009003 Peptidase S1, PA clan AMED_0263 IPR035070 Streptogrisin prodomain AMED_0263 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_0263 IPR003610 Carbohydrate-binding module family 5/12 AMED_0263 IPR033116 Serine proteases, trypsin family, serine active site AMED_0264 IPR038658 Sporulation-specific cell division protein SsgB superfamily AMED_0264 IPR006776 Sporulation-specific cell division protein SsgB AMED_0265 IPR000485 AsnC-type HTH domain AMED_0265 IPR011008 Dimeric alpha-beta barrel AMED_0265 IPR011991 ArsR-like helix-turn-helix domain AMED_0265 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_0265 IPR036390 Winged helix DNA-binding domain superfamily AMED_0265 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0265 IPR019888 Transcription regulator AsnC-type AMED_0265 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_0266 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMED_0266 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMED_0266 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMED_0266 IPR016039 Thiolase-like AMED_0267 IPR003660 HAMP domain AMED_0267 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMED_0267 IPR029787 Nucleotide cyclase AMED_0268 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP AMED_0268 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_0268 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0269 IPR011711 GntR, C-terminal AMED_0269 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_0269 IPR000524 Transcription regulator HTH, GntR AMED_0269 IPR036390 Winged helix DNA-binding domain superfamily AMED_0269 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0272 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0272 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0272 IPR024892 Putative phenylalanine aminotransferase AMED_0272 IPR005861 Histidinol-phosphate aminotransferase family AMED_0272 IPR004839 Aminotransferase, class I/classII AMED_0272 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMED_0272 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0273 IPR002925 Dienelactone hydrolase AMED_0273 IPR029058 Alpha/Beta hydrolase fold AMED_0274 IPR025110 AMP-binding enzyme, C-terminal domain AMED_0274 IPR020845 AMP-binding, conserved site AMED_0274 IPR005914 Acetoacetyl-CoA synthase AMED_0274 IPR000873 AMP-dependent synthetase/ligase AMED_0274 IPR042099 AMP-dependent synthetase-like superfamily AMED_0275 IPR012340 Nucleic acid-binding, OB-fold AMED_0275 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMED_0275 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_0275 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMED_0275 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_0275 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region AMED_0275 IPR002313 Lysine-tRNA ligase, class II AMED_0275 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMED_0277 IPR017853 Glycoside hydrolase superfamily AMED_0277 IPR001579 Glycoside hydrolase, chitinase active site AMED_0277 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_0277 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_0277 IPR013783 Immunoglobulin-like fold AMED_0277 IPR036116 Fibronectin type III superfamily AMED_0277 IPR011583 Chitinase II AMED_0277 IPR003961 Fibronectin type III AMED_0277 IPR018366 Carbohydrate-binding type-2, conserved site AMED_0277 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_0277 IPR029070 Chitinase insertion domain superfamily AMED_0277 IPR001919 Carbohydrate-binding type-2 domain AMED_0278 IPR017853 Glycoside hydrolase superfamily AMED_0279 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0279 IPR005814 Aminotransferase class-III AMED_0279 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0279 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0280 IPR036390 Winged helix DNA-binding domain superfamily AMED_0280 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0280 IPR000847 Transcription regulator HTH, LysR AMED_0280 IPR005119 LysR, substrate-binding AMED_0284 IPR010611 3D domain AMED_0284 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 AMED_0284 IPR011098 G5 domain AMED_0284 IPR036908 RlpA-like domain superfamily AMED_0286 IPR023210 NADP-dependent oxidoreductase domain AMED_0286 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_0289 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0289 IPR000943 RNA polymerase sigma-70 AMED_0289 IPR007627 RNA polymerase sigma-70 region 2 AMED_0289 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0289 IPR013325 RNA polymerase sigma factor, region 2 AMED_0289 IPR007624 RNA polymerase sigma-70 region 3 AMED_0289 IPR007630 RNA polymerase sigma-70 region 4 AMED_0289 IPR014322 RNA polymerase sigma-B/F/G type AMED_0289 IPR014284 RNA polymerase sigma-70 like domain AMED_0290 IPR010193 Serine-protein kinase RsbW AMED_0290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0290 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0291 IPR034768 WhiB-like iron-sulfur binding domain AMED_0291 IPR003482 Transcription factor WhiB AMED_0299 IPR003593 AAA+ ATPase domain AMED_0299 IPR003439 ABC transporter-like AMED_0299 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0299 IPR025302 Domain of unknown function DUF4162 AMED_0299 IPR017871 ABC transporter, conserved site AMED_0310 IPR003099 Prephenate dehydrogenase AMED_0310 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_0310 IPR036291 NAD(P)-binding domain superfamily AMED_0311 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMED_0311 IPR023753 FAD/NAD(P)-binding domain AMED_0311 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0311 IPR013785 Aldolase-type TIM barrel AMED_0315 IPR000835 MarR-type HTH domain AMED_0315 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0315 IPR036390 Winged helix DNA-binding domain superfamily AMED_0316 IPR013094 Alpha/beta hydrolase fold-3 AMED_0316 IPR029058 Alpha/Beta hydrolase fold AMED_0321 IPR024083 Fumarase/histidase, N-terminal AMED_0321 IPR020557 Fumarate lyase, conserved site AMED_0321 IPR008948 L-Aspartase-like AMED_0321 IPR022761 Fumarate lyase, N-terminal AMED_0321 IPR000362 Fumarate lyase family AMED_0321 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase AMED_0321 IPR019468 Adenylosuccinate lyase C-terminal AMED_0322 IPR010617 Endosomal/lysomomal potassium channel TMEM175 AMED_0323 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_0323 IPR007061 Protein of unknown function DUF664 AMED_0325 IPR020590 Guanylate kinase, conserved site AMED_0325 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMED_0325 IPR017665 Guanylate kinase AMED_0325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0325 IPR008144 Guanylate kinase-like domain AMED_0330 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_0330 IPR029033 Histidine phosphatase superfamily AMED_0336 IPR007822 Lanthionine synthetase C-like AMED_0336 IPR000719 Protein kinase domain AMED_0336 IPR011009 Protein kinase-like domain superfamily AMED_0338 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AMED_0338 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AMED_0338 IPR039697 Iron-type alcohol dehydrogenase-like AMED_0339 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_0339 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_0339 IPR000399 TPP-binding enzyme, conserved site AMED_0339 IPR012782 Acetolactate synthase, catabolic AMED_0339 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_0339 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_0339 IPR029061 Thiamin diphosphate-binding fold AMED_0341 IPR012340 Nucleic acid-binding, OB-fold AMED_0341 IPR002059 Cold-shock protein, DNA-binding AMED_0341 IPR012156 Cold shock, CspA AMED_0341 IPR019844 Cold-shock (CSD) domain AMED_0341 IPR011129 Cold shock domain AMED_0343 IPR002504 NAD kinase AMED_0343 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMED_0343 IPR039065 AcoX-like AMED_0343 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMED_0343 IPR011391 Acetoin catabolism kinase AcoX AMED_0344 IPR001017 Dehydrogenase, E1 component AMED_0344 IPR029061 Thiamin diphosphate-binding fold AMED_0345 IPR029016 GAF-like domain superfamily AMED_0347 IPR018313 Solute-binding protein family 3, conserved site AMED_0347 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_0347 IPR001320 Ionotropic glutamate receptor AMED_0348 IPR031634 Protein kinase G, rubredoxin domain AMED_0348 IPR000719 Protein kinase domain AMED_0348 IPR008271 Serine/threonine-protein kinase, active site AMED_0348 IPR011009 Protein kinase-like domain superfamily AMED_0348 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0348 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain AMED_0351 IPR002104 Integrase, catalytic domain AMED_0351 IPR010998 Integrase/recombinase, N-terminal AMED_0351 IPR004107 Integrase, SAM-like, N-terminal AMED_0351 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_0352 IPR041657 Helix-turn-helix domain, group 17 AMED_0352 IPR010093 SinI-like, DNA-binding domain AMED_0353 IPR022081 Domain of unknown function DUF3631 AMED_0360 IPR000424 Primosome PriB/single-strand DNA-binding AMED_0360 IPR011344 Single-stranded DNA-binding protein AMED_0360 IPR012340 Nucleic acid-binding, OB-fold AMED_0370 IPR006776 Sporulation-specific cell division protein SsgB AMED_0370 IPR038658 Sporulation-specific cell division protein SsgB superfamily AMED_0371 IPR000086 NUDIX hydrolase domain AMED_0371 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMED_0371 IPR036412 HAD-like superfamily AMED_0371 IPR023214 HAD superfamily AMED_0371 IPR015797 NUDIX hydrolase-like domain superfamily AMED_0371 IPR020476 NUDIX hydrolase AMED_0371 IPR020084 NUDIX hydrolase, conserved site AMED_0379 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0379 IPR041698 Methyltransferase domain 25 AMED_0381 IPR038765 Papain-like cysteine peptidase superfamily AMED_0381 IPR001447 Arylamine N-acetyltransferase AMED_0382 IPR005330 MHYT domain AMED_0382 IPR001633 EAL domain AMED_0382 IPR035919 EAL domain superfamily AMED_0382 IPR000160 GGDEF domain AMED_0382 IPR029787 Nucleotide cyclase AMED_0387 IPR006043 Xanthine/uracil/vitamin C permease AMED_0387 IPR006042 Xanthine/uracil permease AMED_0387 IPR017588 Uric acid permease UacT-like AMED_0388 IPR038071 UROD/MetE-like superfamily AMED_0388 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AMED_0390 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0390 IPR005471 Transcription regulator IclR, N-terminal AMED_0390 IPR029016 GAF-like domain superfamily AMED_0390 IPR036390 Winged helix DNA-binding domain superfamily AMED_0390 IPR014757 Transcription regulator IclR, C-terminal AMED_0391 IPR028202 Reductase, C-terminal AMED_0391 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0391 IPR023753 FAD/NAD(P)-binding domain AMED_0391 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_0392 IPR012733 4-hydroxybenzoate 3-monooxygenase AMED_0392 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0392 IPR002938 FAD-binding domain AMED_0393 IPR004176 Clp, N-terminal AMED_0393 IPR036628 Clp, N-terminal domain superfamily AMED_0394 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating AMED_0394 IPR006183 6-phosphogluconate dehydrogenase AMED_0394 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_0394 IPR036291 NAD(P)-binding domain superfamily AMED_0394 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_0394 IPR006114 6-phosphogluconate dehydrogenase, C-terminal AMED_0394 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_0394 IPR006184 6-phosphogluconate-binding site AMED_0395 IPR001279 Metallo-beta-lactamase AMED_0395 IPR001018 Beta-lactamase, class-B, conserved site AMED_0395 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_0406 IPR000639 Epoxide hydrolase-like AMED_0406 IPR000073 Alpha/beta hydrolase fold-1 AMED_0406 IPR029058 Alpha/Beta hydrolase fold AMED_0406 IPR016292 Epoxide hydrolase AMED_0408 IPR018713 Domain of unknown function DUF2236 AMED_0410 IPR023631 Amidase signature domain AMED_0410 IPR020556 Amidase, conserved site AMED_0410 IPR000120 Amidase AMED_0410 IPR036928 Amidase signature (AS) superfamily AMED_0412 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AMED_0412 IPR005966 D-cysteine desulfhydrase AMED_0412 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_0412 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_0415 IPR004176 Clp, N-terminal AMED_0415 IPR036628 Clp, N-terminal domain superfamily AMED_0416 IPR038750 Uncharacterized protein YczE/YyaS-like AMED_0417 IPR004839 Aminotransferase, class I/classII AMED_0417 IPR000524 Transcription regulator HTH, GntR AMED_0417 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0417 IPR036390 Winged helix DNA-binding domain superfamily AMED_0417 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0417 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0417 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0419 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0419 IPR004839 Aminotransferase, class I/classII AMED_0419 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0419 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0420 IPR007383 Protein of unknown function DUF445 AMED_0424 IPR023000 Shikimate kinase, conserved site AMED_0424 IPR000623 Shikimate kinase/Threonine synthase-like 1 AMED_0424 IPR031322 Shikimate kinase/gluconokinase AMED_0424 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0425 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AMED_0426 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_0426 IPR001387 Cro/C1-type helix-turn-helix domain AMED_0428 IPR019662 Protein of unknown function DUF2516 AMED_0430 IPR023401 Ornithine cyclodeaminase, N-terminal AMED_0430 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMED_0430 IPR036291 NAD(P)-binding domain superfamily AMED_0431 IPR024083 Fumarase/histidase, N-terminal AMED_0431 IPR008948 L-Aspartase-like AMED_0431 IPR001106 Aromatic amino acid lyase AMED_0431 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AMED_0431 IPR005921 Histidine ammonia-lyase AMED_0436 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0436 IPR035906 MetI-like superfamily AMED_0438 IPR013216 Methyltransferase type 11 AMED_0438 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0439 IPR036390 Winged helix DNA-binding domain superfamily AMED_0439 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0439 IPR011991 ArsR-like helix-turn-helix domain AMED_0439 IPR000835 MarR-type HTH domain AMED_0441 IPR011032 GroES-like superfamily AMED_0441 IPR020843 Polyketide synthase, enoylreductase domain AMED_0441 IPR013149 Alcohol dehydrogenase, C-terminal AMED_0441 IPR041694 Oxidoreductase, N-terminal domain AMED_0441 IPR036291 NAD(P)-binding domain superfamily AMED_0444 IPR011032 GroES-like superfamily AMED_0444 IPR036291 NAD(P)-binding domain superfamily AMED_0444 IPR020843 Polyketide synthase, enoylreductase domain AMED_0444 IPR013149 Alcohol dehydrogenase, C-terminal AMED_0444 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0444 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_0445 IPR002912 ACT domain AMED_0445 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AMED_0445 IPR004810 Formyltetrahydrofolate deformylase AMED_0445 IPR036477 Formyl transferase, N-terminal domain superfamily AMED_0445 IPR002376 Formyl transferase, N-terminal AMED_0450 IPR016166 FAD-binding domain, PCMH-type AMED_0450 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AMED_0450 IPR006094 FAD linked oxidase, N-terminal AMED_0450 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AMED_0450 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily AMED_0450 IPR036318 FAD-binding, type PCMH-like superfamily AMED_0450 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_0450 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_0451 IPR005490 L,D-transpeptidase catalytic domain AMED_0451 IPR038063 L,D-transpeptidase catalytic domain-like AMED_0451 IPR041280 Bacterial Ig domain, transpeptidase-associated AMED_0452 IPR000639 Epoxide hydrolase-like AMED_0452 IPR000073 Alpha/beta hydrolase fold-1 AMED_0452 IPR029058 Alpha/Beta hydrolase fold AMED_0453 IPR001296 Glycosyl transferase, family 1 AMED_0453 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_0453 IPR017814 Mycothiol biosynthesis protein, MshA AMED_0454 IPR019660 Putative sensory transduction regulator YbjN AMED_0456 IPR005952 Phosphoglycerate mutase 1 AMED_0456 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_0456 IPR029033 Histidine phosphatase superfamily AMED_0458 IPR023210 NADP-dependent oxidoreductase domain AMED_0458 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_0459 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0459 IPR005467 Histidine kinase domain AMED_0459 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0459 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_0459 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_0459 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_0460 IPR039420 Transcriptional regulatory protein WalR-like AMED_0460 IPR001789 Signal transduction response regulator, receiver domain AMED_0460 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0460 IPR011006 CheY-like superfamily AMED_0460 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0460 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_0461 IPR003695 Ppx/GppA phosphatase AMED_0464 IPR036237 Xylose isomerase-like superfamily AMED_0464 IPR013022 Xylose isomerase-like, TIM barrel domain AMED_0466 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_0466 IPR036291 NAD(P)-binding domain superfamily AMED_0466 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMED_0466 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AMED_0466 IPR000304 Pyrroline-5-carboxylate reductase AMED_0467 IPR041657 Helix-turn-helix domain, group 17 AMED_0467 IPR010093 SinI-like, DNA-binding domain AMED_0467 IPR009061 Putative DNA-binding domain superfamily AMED_0468 IPR001509 NAD-dependent epimerase/dehydratase AMED_0468 IPR036291 NAD(P)-binding domain superfamily AMED_0469 IPR016676 Phospholipid/glycerol acyltransferase, predicted AMED_0469 IPR002123 Phospholipid/glycerol acyltransferase AMED_0470 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0470 IPR005467 Histidine kinase domain AMED_0471 IPR011006 CheY-like superfamily AMED_0471 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0471 IPR001789 Signal transduction response regulator, receiver domain AMED_0471 IPR000792 Transcription regulator LuxR, C-terminal AMED_0471 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0473 IPR036412 HAD-like superfamily AMED_0473 IPR023214 HAD superfamily AMED_0473 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AMED_0475 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_0475 IPR013325 RNA polymerase sigma factor, region 2 AMED_0475 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_0475 IPR007627 RNA polymerase sigma-70 region 2 AMED_0475 IPR014284 RNA polymerase sigma-70 like domain AMED_0475 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0475 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0475 IPR039425 RNA polymerase sigma-70 like AMED_0476 IPR042099 AMP-dependent synthetase-like superfamily AMED_0476 IPR020459 AMP-binding AMED_0476 IPR020845 AMP-binding, conserved site AMED_0476 IPR000873 AMP-dependent synthetase/ligase AMED_0476 IPR025110 AMP-binding enzyme, C-terminal domain AMED_0477 IPR036249 Thioredoxin-like superfamily AMED_0477 IPR008554 Glutaredoxin-like AMED_0479 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0479 IPR022876 Redox-sensing transcriptional repressor Rex AMED_0479 IPR009718 Rex DNA-binding, C-terminal domain AMED_0479 IPR036291 NAD(P)-binding domain superfamily AMED_0479 IPR003781 CoA-binding AMED_0479 IPR036390 Winged helix DNA-binding domain superfamily AMED_0480 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AMED_0480 IPR036291 NAD(P)-binding domain superfamily AMED_0480 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMED_0480 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AMED_0480 IPR018214 Glutamyl-tRNA reductase, conserved site AMED_0480 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AMED_0480 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AMED_0480 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AMED_0481 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AMED_0481 IPR022418 Porphobilinogen deaminase, C-terminal AMED_0481 IPR022417 Porphobilinogen deaminase, N-terminal AMED_0481 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AMED_0481 IPR000860 Porphobilinogen deaminase AMED_0482 IPR014776 Tetrapyrrole methylase, subdomain 2 AMED_0482 IPR036291 NAD(P)-binding domain superfamily AMED_0482 IPR012409 Sirohaem synthase AMED_0482 IPR006366 Uroporphyrin-III C-methyltransferase AMED_0482 IPR037115 Sirohaem synthase, dimerisation domain superfamily AMED_0482 IPR028281 Siroheme synthase, central domain AMED_0482 IPR019478 Sirohaem synthase, dimerisation domain AMED_0482 IPR006367 Sirohaem synthase, N-terminal AMED_0482 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AMED_0482 IPR000878 Tetrapyrrole methylase AMED_0482 IPR035996 Tetrapyrrole methylase superfamily AMED_0482 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_0483 IPR016040 NAD(P)-binding domain AMED_0483 IPR036291 NAD(P)-binding domain superfamily AMED_0483 IPR005886 UDP-glucose 4-epimerase AMED_0485 IPR013785 Aldolase-type TIM barrel AMED_0485 IPR030656 Delta-aminolevulinic acid dehydratase, active site AMED_0485 IPR001731 Delta-aminolevulinic acid dehydratase AMED_0489 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMED_0489 IPR006143 RND efflux pump, membrane fusion protein AMED_0489 IPR030190 Macrolide export protein MacA AMED_0490 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_0490 IPR017871 ABC transporter, conserved site AMED_0490 IPR003439 ABC transporter-like AMED_0490 IPR003838 ABC transporter permease protein domain AMED_0490 IPR003593 AAA+ ATPase domain AMED_0490 IPR025857 MacB-like periplasmic core domain AMED_0490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0491 IPR003439 ABC transporter-like AMED_0491 IPR003593 AAA+ ATPase domain AMED_0491 IPR003838 ABC transporter permease protein domain AMED_0491 IPR017871 ABC transporter, conserved site AMED_0491 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0491 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_0491 IPR025857 MacB-like periplasmic core domain AMED_0494 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AMED_0494 IPR005814 Aminotransferase class-III AMED_0494 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0494 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0494 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0495 IPR029033 Histidine phosphatase superfamily AMED_0495 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_0496 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMED_0496 IPR036249 Thioredoxin-like superfamily AMED_0496 IPR017937 Thioredoxin, conserved site AMED_0496 IPR013766 Thioredoxin domain AMED_0497 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AMED_0499 IPR003557 Cytochrome c-type biogenesis protein CcmC AMED_0499 IPR002541 Cytochrome c assembly protein AMED_0499 IPR017562 Cytochrome c-type biogenesis protein CcsA AMED_0500 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMED_0500 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0503 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0503 IPR019888 Transcription regulator AsnC-type AMED_0503 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_0503 IPR011008 Dimeric alpha-beta barrel AMED_0503 IPR036390 Winged helix DNA-binding domain superfamily AMED_0503 IPR011991 ArsR-like helix-turn-helix domain AMED_0503 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_0503 IPR000485 AsnC-type HTH domain AMED_0506 IPR026046 UbiA prenyltransferase domain containing protein 1 AMED_0506 IPR000537 UbiA prenyltransferase family AMED_0506 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase AMED_0508 IPR042099 AMP-dependent synthetase-like superfamily AMED_0508 IPR000873 AMP-dependent synthetase/ligase AMED_0508 IPR020845 AMP-binding, conserved site AMED_0508 IPR025110 AMP-binding enzyme, C-terminal domain AMED_0509 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_0509 IPR001753 Enoyl-CoA hydratase/isomerase AMED_0509 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB AMED_0509 IPR029045 ClpP/crotonase-like domain superfamily AMED_0510 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_0510 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase AMED_0510 IPR029061 Thiamin diphosphate-binding fold AMED_0510 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_0511 IPR024571 ERAP1-like C-terminal domain AMED_0511 IPR042097 Aminopeptidase N-like , N-terminal AMED_0511 IPR034016 Aminopeptidase N-type AMED_0511 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMED_0511 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMED_0513 IPR000760 Inositol monophosphatase-like AMED_0513 IPR020550 Inositol monophosphatase, conserved site AMED_0513 IPR020583 Inositol monophosphatase, metal-binding site AMED_0513 IPR033942 Inositol monophosphatase AMED_0513 IPR022337 Inositol monophosphatase, SuhB AMED_0514 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_0514 IPR001296 Glycosyl transferase, family 1 AMED_0515 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_0515 IPR001296 Glycosyl transferase, family 1 AMED_0518 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0518 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_0518 IPR004033 UbiE/COQ5 methyltransferase AMED_0519 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0519 IPR002938 FAD-binding domain AMED_0519 IPR011777 Geranylgeranyl reductase family AMED_0520 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily AMED_0520 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid AMED_0520 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 AMED_0521 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AMED_0521 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AMED_0522 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily AMED_0522 IPR010218 NADH dehydrogenase, subunit C AMED_0522 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AMED_0523 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AMED_0523 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AMED_0523 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily AMED_0523 IPR029014 [NiFe]-hydrogenase, large subunit AMED_0523 IPR001135 NADH-quinone oxidoreductase, subunit D AMED_0524 IPR002023 NADH-quinone oxidoreductase subunit E-like AMED_0524 IPR042128 NuoE domain AMED_0524 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal AMED_0524 IPR036249 Thioredoxin-like superfamily AMED_0525 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AMED_0525 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AMED_0525 IPR011537 NADH ubiquinone oxidoreductase, F subunit AMED_0525 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AMED_0525 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AMED_0525 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AMED_0525 IPR019554 Soluble ligand binding domain AMED_0526 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AMED_0526 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AMED_0526 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_0526 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AMED_0526 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_0526 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_0526 IPR006656 Molybdopterin oxidoreductase AMED_0526 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_0526 IPR006657 Molybdopterin dinucleotide-binding domain AMED_0527 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AMED_0527 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AMED_0528 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_0528 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_0528 IPR010226 NADH-quinone oxidoreductase, chain I AMED_0529 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ AMED_0529 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 AMED_0530 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K AMED_0530 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMED_0531 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMED_0531 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMED_0531 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AMED_0531 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AMED_0532 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMED_0532 IPR003918 NADH:ubiquinone oxidoreductase AMED_0532 IPR010227 NADH-quinone oxidoreductase, chain M/4 AMED_0533 IPR003918 NADH:ubiquinone oxidoreductase AMED_0533 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMED_0533 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AMED_0537 IPR033749 Polyprenyl synthetase, conserved site AMED_0537 IPR000092 Polyprenyl synthetase AMED_0537 IPR008949 Isoprenoid synthase domain superfamily AMED_0540 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_0540 IPR029061 Thiamin diphosphate-binding fold AMED_0541 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit AMED_0541 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_0541 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain AMED_0541 IPR029061 Thiamin diphosphate-binding fold AMED_0541 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain AMED_0541 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AMED_0541 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AMED_0542 IPR029045 ClpP/crotonase-like domain superfamily AMED_0542 IPR001753 Enoyl-CoA hydratase/isomerase AMED_0542 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_0543 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_0543 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_0543 IPR011008 Dimeric alpha-beta barrel AMED_0543 IPR000485 AsnC-type HTH domain AMED_0543 IPR011991 ArsR-like helix-turn-helix domain AMED_0543 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0543 IPR036390 Winged helix DNA-binding domain superfamily AMED_0543 IPR019888 Transcription regulator AsnC-type AMED_0547 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMED_0547 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMED_0547 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_0547 IPR028358 GDP-mannose 6-dehydrogenase AMED_0547 IPR036291 NAD(P)-binding domain superfamily AMED_0547 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMED_0547 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMED_0547 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMED_0548 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_0548 IPR001296 Glycosyl transferase, family 1 AMED_0548 IPR017814 Mycothiol biosynthesis protein, MshA AMED_0551 IPR033738 Asparagine synthase, N-terminal domain AMED_0551 IPR001962 Asparagine synthase AMED_0551 IPR006426 Asparagine synthase, glutamine-hydrolyzing AMED_0551 IPR017932 Glutamine amidotransferase type 2 domain AMED_0551 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_0552 IPR013149 Alcohol dehydrogenase, C-terminal AMED_0552 IPR011032 GroES-like superfamily AMED_0552 IPR036291 NAD(P)-binding domain superfamily AMED_0556 IPR001296 Glycosyl transferase, family 1 AMED_0556 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_0560 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AMED_0560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0560 IPR005814 Aminotransferase class-III AMED_0560 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0561 IPR014710 RmlC-like jelly roll fold AMED_0561 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AMED_0561 IPR011051 RmlC-like cupin domain superfamily AMED_0563 IPR029044 Nucleotide-diphospho-sugar transferases AMED_0563 IPR001173 Glycosyltransferase 2-like AMED_0565 IPR032589 Domain of unknown function DUF4910 AMED_0565 IPR032610 Domain of unknown function DUF2172 AMED_0565 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0565 IPR032622 UCP01524, winged helix-turn-helix domain AMED_0565 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like AMED_0566 IPR036291 NAD(P)-binding domain superfamily AMED_0566 IPR005886 UDP-glucose 4-epimerase AMED_0566 IPR016040 NAD(P)-binding domain AMED_0568 IPR005835 Nucleotidyl transferase domain AMED_0568 IPR029044 Nucleotide-diphospho-sugar transferases AMED_0568 IPR013446 Glucose-1-phosphate cytidylyltransferase AMED_0569 IPR038576 Methyltransferase putative zinc binding domain superfamily AMED_0569 IPR013630 Methyltransferase putative zinc binding domain AMED_0569 IPR013691 C-methyltransferase AMED_0569 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0571 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_0571 IPR011251 Luciferase-like domain AMED_0571 IPR036661 Luciferase-like domain superfamily AMED_0573 IPR022919 Peptidase M48, protease HtpX, putative AMED_0573 IPR001915 Peptidase M48 AMED_0574 IPR036661 Luciferase-like domain superfamily AMED_0574 IPR011251 Luciferase-like domain AMED_0574 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AMED_0575 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AMED_0575 IPR036661 Luciferase-like domain superfamily AMED_0575 IPR011251 Luciferase-like domain AMED_0576 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AMED_0576 IPR029044 Nucleotide-diphospho-sugar transferases AMED_0576 IPR005835 Nucleotidyl transferase domain AMED_0579 IPR007551 Protein of unknown function DUF520 AMED_0579 IPR035570 UPF0234, N-terminal AMED_0579 IPR036183 YajQ-like superfamily AMED_0579 IPR035571 UPF0234-like, C-terminal AMED_0581 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMED_0581 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0581 IPR013216 Methyltransferase type 11 AMED_0582 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_0582 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0582 IPR027543 Lon protease, bacterial AMED_0582 IPR008268 Peptidase S16, active site AMED_0582 IPR015947 PUA-like superfamily AMED_0582 IPR027065 Lon protease AMED_0582 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_0582 IPR003593 AAA+ ATPase domain AMED_0582 IPR004815 Lon protease, bacterial/eukaryotic-type AMED_0582 IPR008269 Peptidase S16, Lon proteolytic domain AMED_0582 IPR003111 Lon, substrate-binding domain AMED_0582 IPR003959 ATPase, AAA-type, core AMED_0585 IPR000160 GGDEF domain AMED_0585 IPR001633 EAL domain AMED_0585 IPR029787 Nucleotide cyclase AMED_0585 IPR005330 MHYT domain AMED_0585 IPR035919 EAL domain superfamily AMED_0586 IPR018264 Ribosomal protein L33, conserved site AMED_0586 IPR011332 Zinc-binding ribosomal protein AMED_0586 IPR038584 Ribosomal protein L33 superfamily AMED_0586 IPR001705 Ribosomal protein L33 AMED_0587 IPR029069 HotDog domain superfamily AMED_0587 IPR039569 N-terminal of MaoC-like dehydratase AMED_0587 IPR016709 Uncharacterised protein family UPF0336 AMED_0591 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0591 IPR036390 Winged helix DNA-binding domain superfamily AMED_0591 IPR000524 Transcription regulator HTH, GntR AMED_0592 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_0592 IPR011251 Luciferase-like domain AMED_0592 IPR036661 Luciferase-like domain superfamily AMED_0593 IPR005807 SecE subunit of protein translocation complex, bacterial-like AMED_0593 IPR038379 SecE superfamily AMED_0593 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AMED_0594 IPR036735 NusG, N-terminal domain superfamily AMED_0594 IPR014722 Ribosomal protein L2, domain 2 AMED_0594 IPR008991 Translation protein SH3-like domain superfamily AMED_0594 IPR001062 Transcription antitermination protein, NusG AMED_0594 IPR006645 NusG, N-terminal AMED_0594 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMED_0595 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMED_0595 IPR020785 Ribosomal protein L11, conserved site AMED_0595 IPR006519 Ribosomal protein L11, bacterial-type AMED_0595 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMED_0595 IPR020784 Ribosomal protein L11, N-terminal AMED_0595 IPR000911 Ribosomal protein L11/L12 AMED_0595 IPR020783 Ribosomal protein L11, C-terminal AMED_0596 IPR023674 Ribosomal protein L1-like AMED_0596 IPR023673 Ribosomal protein L1, conserved site AMED_0596 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMED_0596 IPR002143 Ribosomal protein L1 AMED_0596 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMED_0596 IPR005878 Ribosomal protein L1, bacterial-type AMED_0597 IPR000073 Alpha/beta hydrolase fold-1 AMED_0597 IPR019913 Pyrimidine utilisation protein RutD AMED_0597 IPR029058 Alpha/Beta hydrolase fold AMED_0599 IPR001790 Ribosomal protein L10P AMED_0599 IPR002363 Ribosomal protein L10, eubacterial, conserved site AMED_0599 IPR022973 Ribosomal protein L10 AMED_0600 IPR000206 Ribosomal protein L7/L12 AMED_0600 IPR013823 Ribosomal protein L7/L12, C-terminal AMED_0600 IPR008932 Ribosomal protein L7/L12, oligomerisation AMED_0600 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily AMED_0600 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMED_0601 IPR003593 AAA+ ATPase domain AMED_0601 IPR003439 ABC transporter-like AMED_0601 IPR017871 ABC transporter, conserved site AMED_0601 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AMED_0601 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0603 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMED_0603 IPR030802 ABC transporter permease MalE AMED_0608 IPR005693 Virulence factor Mce protein AMED_0608 IPR003399 Mce/MlaD AMED_0613 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase AMED_0613 IPR000683 Oxidoreductase, N-terminal AMED_0613 IPR036291 NAD(P)-binding domain superfamily AMED_0613 IPR004104 Oxidoreductase, C-terminal AMED_0616 IPR017972 Cytochrome P450, conserved site AMED_0616 IPR036396 Cytochrome P450 superfamily AMED_0616 IPR002397 Cytochrome P450, B-class AMED_0616 IPR001128 Cytochrome P450 AMED_0617 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0617 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0617 IPR011032 GroES-like superfamily AMED_0617 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0617 IPR006162 Phosphopantetheine attachment site AMED_0617 IPR001227 Acyl transferase domain superfamily AMED_0617 IPR018201 Beta-ketoacyl synthase, active site AMED_0617 IPR016039 Thiolase-like AMED_0617 IPR036291 NAD(P)-binding domain superfamily AMED_0617 IPR009081 Phosphopantetheine binding ACP domain AMED_0617 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0617 IPR036736 ACP-like superfamily AMED_0617 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0617 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0617 IPR020807 Polyketide synthase, dehydratase domain AMED_0617 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0617 IPR020843 Polyketide synthase, enoylreductase domain AMED_0617 IPR013968 Polyketide synthase, ketoreductase domain AMED_0617 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0617 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0617 IPR014043 Acyl transferase AMED_0618 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0618 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0618 IPR009081 Phosphopantetheine binding ACP domain AMED_0618 IPR006162 Phosphopantetheine attachment site AMED_0618 IPR016039 Thiolase-like AMED_0618 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0618 IPR013968 Polyketide synthase, ketoreductase domain AMED_0618 IPR001227 Acyl transferase domain superfamily AMED_0618 IPR036736 ACP-like superfamily AMED_0618 IPR018201 Beta-ketoacyl synthase, active site AMED_0618 IPR014043 Acyl transferase AMED_0618 IPR020807 Polyketide synthase, dehydratase domain AMED_0618 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0618 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0618 IPR036291 NAD(P)-binding domain superfamily AMED_0618 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0618 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0618 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0619 IPR011032 GroES-like superfamily AMED_0619 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0619 IPR013968 Polyketide synthase, ketoreductase domain AMED_0619 IPR014043 Acyl transferase AMED_0619 IPR020843 Polyketide synthase, enoylreductase domain AMED_0619 IPR036736 ACP-like superfamily AMED_0619 IPR001227 Acyl transferase domain superfamily AMED_0619 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0619 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0619 IPR018201 Beta-ketoacyl synthase, active site AMED_0619 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0619 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0619 IPR011032 GroES-like superfamily AMED_0619 IPR018201 Beta-ketoacyl synthase, active site AMED_0619 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0619 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0619 IPR036291 NAD(P)-binding domain superfamily AMED_0619 IPR016039 Thiolase-like AMED_0619 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0619 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_0619 IPR009081 Phosphopantetheine binding ACP domain AMED_0619 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0619 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0619 IPR015083 Polyketide synthase, docking domain AMED_0619 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0619 IPR020807 Polyketide synthase, dehydratase domain AMED_0619 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0619 IPR006162 Phosphopantetheine attachment site AMED_0619 IPR014043 Acyl transferase AMED_0619 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0619 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0619 IPR036291 NAD(P)-binding domain superfamily AMED_0619 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0619 IPR020807 Polyketide synthase, dehydratase domain AMED_0619 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0619 IPR020843 Polyketide synthase, enoylreductase domain AMED_0619 IPR013968 Polyketide synthase, ketoreductase domain AMED_0619 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0619 IPR015083 Polyketide synthase, docking domain AMED_0619 IPR009081 Phosphopantetheine binding ACP domain AMED_0619 IPR006162 Phosphopantetheine attachment site AMED_0619 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_0619 IPR016039 Thiolase-like AMED_0619 IPR001227 Acyl transferase domain superfamily AMED_0619 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0619 IPR036736 ACP-like superfamily AMED_0620 IPR018201 Beta-ketoacyl synthase, active site AMED_0620 IPR036736 ACP-like superfamily AMED_0620 IPR001227 Acyl transferase domain superfamily AMED_0620 IPR018201 Beta-ketoacyl synthase, active site AMED_0620 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0620 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0620 IPR016039 Thiolase-like AMED_0620 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_0620 IPR006162 Phosphopantetheine attachment site AMED_0620 IPR009081 Phosphopantetheine binding ACP domain AMED_0620 IPR015083 Polyketide synthase, docking domain AMED_0620 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0620 IPR036291 NAD(P)-binding domain superfamily AMED_0620 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0620 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0620 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0620 IPR013968 Polyketide synthase, ketoreductase domain AMED_0620 IPR020843 Polyketide synthase, enoylreductase domain AMED_0620 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0620 IPR014043 Acyl transferase AMED_0620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0620 IPR011032 GroES-like superfamily AMED_0620 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0620 IPR011032 GroES-like superfamily AMED_0620 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0620 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0620 IPR036291 NAD(P)-binding domain superfamily AMED_0620 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0620 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_0620 IPR006162 Phosphopantetheine attachment site AMED_0620 IPR016039 Thiolase-like AMED_0620 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0620 IPR020807 Polyketide synthase, dehydratase domain AMED_0620 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0620 IPR020843 Polyketide synthase, enoylreductase domain AMED_0620 IPR009081 Phosphopantetheine binding ACP domain AMED_0620 IPR013968 Polyketide synthase, ketoreductase domain AMED_0620 IPR001227 Acyl transferase domain superfamily AMED_0620 IPR036736 ACP-like superfamily AMED_0620 IPR014043 Acyl transferase AMED_0620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0620 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0620 IPR015083 Polyketide synthase, docking domain AMED_0620 IPR020807 Polyketide synthase, dehydratase domain AMED_0621 IPR036736 ACP-like superfamily AMED_0621 IPR001227 Acyl transferase domain superfamily AMED_0621 IPR016039 Thiolase-like AMED_0621 IPR006162 Phosphopantetheine attachment site AMED_0621 IPR009081 Phosphopantetheine binding ACP domain AMED_0621 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_0621 IPR013968 Polyketide synthase, ketoreductase domain AMED_0621 IPR020843 Polyketide synthase, enoylreductase domain AMED_0621 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_0621 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_0621 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_0621 IPR036291 NAD(P)-binding domain superfamily AMED_0621 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_0621 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_0621 IPR020807 Polyketide synthase, dehydratase domain AMED_0621 IPR018201 Beta-ketoacyl synthase, active site AMED_0621 IPR011032 GroES-like superfamily AMED_0621 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0621 IPR014043 Acyl transferase AMED_0621 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_0621 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_0622 IPR001447 Arylamine N-acetyltransferase AMED_0622 IPR038765 Papain-like cysteine peptidase superfamily AMED_0624 IPR030960 3-dehydroquinate synthase domain AMED_0625 IPR013785 Aldolase-type TIM barrel AMED_0625 IPR002480 DAHP synthetase, class II AMED_0626 IPR022893 Shikimate dehydrogenase family AMED_0626 IPR041121 SDH, C-terminal AMED_0626 IPR036291 NAD(P)-binding domain superfamily AMED_0626 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AMED_0627 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0627 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0627 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMED_0627 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0628 IPR004104 Oxidoreductase, C-terminal AMED_0628 IPR036291 NAD(P)-binding domain superfamily AMED_0628 IPR000683 Oxidoreductase, N-terminal AMED_0629 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_0629 IPR023214 HAD superfamily AMED_0629 IPR041492 Haloacid dehalogenase-like hydrolase AMED_0629 IPR036412 HAD-like superfamily AMED_0629 IPR006439 HAD hydrolase, subfamily IA AMED_0629 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMED_0629 IPR037512 Phosphoglycolate phosphatase, prokaryotic AMED_0630 IPR000600 ROK family AMED_0631 IPR017810 Mycothiol biosynthesis protein, MshB AMED_0631 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_0631 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_0632 IPR033140 Lipase, GDXG, putative serine active site AMED_0632 IPR029058 Alpha/Beta hydrolase fold AMED_0632 IPR002168 Lipase, GDXG, putative histidine active site AMED_0632 IPR013094 Alpha/beta hydrolase fold-3 AMED_0633 IPR011701 Major facilitator superfamily AMED_0633 IPR036259 MFS transporter superfamily AMED_0633 IPR020846 Major facilitator superfamily domain AMED_0636 IPR036396 Cytochrome P450 superfamily AMED_0636 IPR002397 Cytochrome P450, B-class AMED_0636 IPR001128 Cytochrome P450 AMED_0636 IPR017972 Cytochrome P450, conserved site AMED_0637 IPR001128 Cytochrome P450 AMED_0637 IPR002397 Cytochrome P450, B-class AMED_0637 IPR017972 Cytochrome P450, conserved site AMED_0637 IPR036396 Cytochrome P450 superfamily AMED_0638 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMED_0638 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0638 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0638 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0639 IPR030953 Glycosyltransferase, activator-dependent family AMED_0639 IPR010610 Domain of unknown function DUF1205 AMED_0640 IPR011051 RmlC-like cupin domain superfamily AMED_0640 IPR014710 RmlC-like jelly roll fold AMED_0640 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AMED_0641 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_0641 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_0641 IPR015424 Pyridoxal phosphate-dependent transferase AMED_0641 IPR005814 Aminotransferase class-III AMED_0642 IPR000683 Oxidoreductase, N-terminal AMED_0642 IPR036291 NAD(P)-binding domain superfamily AMED_0644 IPR011251 Luciferase-like domain AMED_0644 IPR036661 Luciferase-like domain superfamily AMED_0645 IPR005212 NDP-hexose 2,3-dehydratase AMED_0645 IPR038153 NDP-hexose 2,3-dehydratase-like superfamily AMED_0646 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0646 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase AMED_0646 IPR002938 FAD-binding domain AMED_0648 IPR020802 Polyketide synthase, thioesterase domain AMED_0648 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS AMED_0648 IPR001031 Thioesterase AMED_0648 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_0648 IPR029058 Alpha/Beta hydrolase fold AMED_0649 IPR036396 Cytochrome P450 superfamily AMED_0649 IPR017972 Cytochrome P450, conserved site AMED_0649 IPR002397 Cytochrome P450, B-class AMED_0649 IPR001128 Cytochrome P450 AMED_0650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0650 IPR013216 Methyltransferase type 11 AMED_0650 IPR020803 Polyketide synthase, methyltransferase domain AMED_0651 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_0651 IPR005474 Transketolase, N-terminal AMED_0651 IPR029061 Thiamin diphosphate-binding fold AMED_0652 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_0652 IPR029061 Thiamin diphosphate-binding fold AMED_0652 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_0653 IPR001128 Cytochrome P450 AMED_0653 IPR002397 Cytochrome P450, B-class AMED_0653 IPR017972 Cytochrome P450, conserved site AMED_0653 IPR036396 Cytochrome P450 superfamily AMED_0654 IPR018509 Dehydroquinase, class II, conserved site AMED_0654 IPR001874 Dehydroquinase, class II AMED_0654 IPR036441 Dehydroquinase, class II superfamily AMED_0655 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0655 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0655 IPR000792 Transcription regulator LuxR, C-terminal AMED_0655 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0655 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0656 IPR007645 RNA polymerase Rpb2, domain 3 AMED_0656 IPR015712 DNA-directed RNA polymerase, subunit 2 AMED_0656 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily AMED_0656 IPR007644 RNA polymerase, beta subunit, protrusion AMED_0656 IPR007121 RNA polymerase, beta subunit, conserved site AMED_0656 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AMED_0656 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AMED_0656 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AMED_0656 IPR007641 RNA polymerase Rpb2, domain 7 AMED_0656 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AMED_0656 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AMED_0656 IPR014724 RNA polymerase Rpb2, OB-fold AMED_0656 IPR007642 RNA polymerase Rpb2, domain 2 AMED_0657 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AMED_0657 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AMED_0657 IPR007080 RNA polymerase Rpb1, domain 1 AMED_0657 IPR000722 RNA polymerase, alpha subunit AMED_0657 IPR006592 RNA polymerase, N-terminal AMED_0657 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AMED_0657 IPR007083 RNA polymerase Rpb1, domain 4 AMED_0657 IPR007066 RNA polymerase Rpb1, domain 3 AMED_0657 IPR007081 RNA polymerase Rpb1, domain 5 AMED_0659 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily AMED_0659 IPR000755 D-alanyl-D-alanine dipeptidase AMED_0660 IPR000485 AsnC-type HTH domain AMED_0660 IPR011008 Dimeric alpha-beta barrel AMED_0660 IPR019888 Transcription regulator AsnC-type AMED_0660 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_0660 IPR036390 Winged helix DNA-binding domain superfamily AMED_0660 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_0660 IPR011991 ArsR-like helix-turn-helix domain AMED_0660 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0661 IPR020846 Major facilitator superfamily domain AMED_0661 IPR011701 Major facilitator superfamily AMED_0661 IPR036259 MFS transporter superfamily AMED_0663 IPR014710 RmlC-like jelly roll fold AMED_0663 IPR000182 GNAT domain AMED_0663 IPR016181 Acyl-CoA N-acyltransferase AMED_0663 IPR000595 Cyclic nucleotide-binding domain AMED_0663 IPR018488 Cyclic nucleotide-binding, conserved site AMED_0663 IPR018490 Cyclic nucleotide-binding-like AMED_0672 IPR005679 Ribosomal protein S12, bacterial-type AMED_0672 IPR012340 Nucleic acid-binding, OB-fold AMED_0672 IPR006032 Ribosomal protein S12/S23 AMED_0673 IPR020606 Ribosomal protein S7, conserved site AMED_0673 IPR036823 Ribosomal protein S7 domain superfamily AMED_0673 IPR000235 Ribosomal protein S5/S7 AMED_0673 IPR005717 Ribosomal protein S7, bacterial/organellar-type AMED_0673 IPR023798 Ribosomal protein S7 domain AMED_0674 IPR005517 Translation elongation factor EFG/EF2, domain IV AMED_0674 IPR004540 Translation elongation factor EFG/EF2 AMED_0674 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_0674 IPR000795 Transcription factor, GTP-binding domain AMED_0674 IPR005225 Small GTP-binding protein domain AMED_0674 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_0674 IPR009000 Translation protein, beta-barrel domain superfamily AMED_0674 IPR031157 Tr-type G domain, conserved site AMED_0674 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_0674 IPR000640 Elongation factor EFG, domain V-like AMED_0674 IPR035649 EFG, domain V AMED_0674 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0674 IPR041095 Elongation Factor G, domain II AMED_0674 IPR009022 Elongation factor G, domain III AMED_0674 IPR035647 EF-G domain III/V-like AMED_0675 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0675 IPR005225 Small GTP-binding protein domain AMED_0675 IPR000795 Transcription factor, GTP-binding domain AMED_0675 IPR031157 Tr-type G domain, conserved site AMED_0675 IPR033720 Elongation factor Tu, domain 2 AMED_0675 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_0675 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AMED_0675 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AMED_0675 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMED_0675 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMED_0675 IPR009000 Translation protein, beta-barrel domain superfamily AMED_0676 IPR027486 Ribosomal protein S10 domain AMED_0676 IPR036838 Ribosomal protein S10 domain superfamily AMED_0676 IPR018268 Ribosomal protein S10, conserved site AMED_0676 IPR001848 Ribosomal protein S10 AMED_0677 IPR019927 Ribosomal protein L3, bacterial/organelle-type AMED_0677 IPR009000 Translation protein, beta-barrel domain superfamily AMED_0677 IPR019926 Ribosomal protein L3, conserved site AMED_0677 IPR000597 Ribosomal protein L3 AMED_0678 IPR002136 Ribosomal protein L4/L1e AMED_0678 IPR023574 Ribosomal protein L4 domain superfamily AMED_0678 IPR013005 50S ribosomal protein uL4 AMED_0679 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMED_0679 IPR012678 Ribosomal protein L23/L15e core domain superfamily AMED_0679 IPR013025 Ribosomal protein L25/L23 AMED_0679 IPR001014 Ribosomal protein L23/L25, conserved site AMED_0680 IPR022666 Ribosomal Proteins L2, RNA binding domain AMED_0680 IPR022671 Ribosomal protein L2, conserved site AMED_0680 IPR012340 Nucleic acid-binding, OB-fold AMED_0680 IPR014722 Ribosomal protein L2, domain 2 AMED_0680 IPR014726 Ribosomal protein L2, domain 3 AMED_0680 IPR008991 Translation protein SH3-like domain superfamily AMED_0680 IPR002171 Ribosomal protein L2 AMED_0680 IPR005880 Ribosomal protein L2, bacterial/organellar-type AMED_0680 IPR022669 Ribosomal protein L2, C-terminal AMED_0681 IPR002222 Ribosomal protein S19/S15 AMED_0681 IPR005732 Ribosomal protein S19, bacterial-type AMED_0681 IPR020934 Ribosomal protein S19 conserved site AMED_0681 IPR023575 Ribosomal protein S19, superfamily AMED_0682 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AMED_0682 IPR018260 Ribosomal protein L22/L17, conserved site AMED_0682 IPR001063 Ribosomal protein L22/L17 AMED_0682 IPR036394 Ribosomal protein L22/L17 superfamily AMED_0683 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AMED_0683 IPR004044 K Homology domain, type 2 AMED_0683 IPR001351 Ribosomal protein S3, C-terminal AMED_0683 IPR009019 K homology domain superfamily, prokaryotic type AMED_0683 IPR015946 K homology domain-like, alpha/beta AMED_0683 IPR004087 K Homology domain AMED_0683 IPR005704 Ribosomal protein S3, bacterial-type AMED_0683 IPR018280 Ribosomal protein S3, conserved site AMED_0684 IPR000114 Ribosomal protein L16 AMED_0684 IPR016180 Ribosomal protein L10e/L16 AMED_0684 IPR020798 Ribosomal protein L16, conserved site AMED_0684 IPR036920 Ribosomal protein L10e/L16 superfamily AMED_0685 IPR001854 Ribosomal protein L29/L35 AMED_0685 IPR036049 Ribosomal protein L29/L35 superfamily AMED_0685 IPR018254 Ribosomal protein L29, conserved site AMED_0686 IPR012340 Nucleic acid-binding, OB-fold AMED_0686 IPR000266 Ribosomal protein S17/S11 AMED_0686 IPR019984 30S ribosomal protein S17 AMED_0686 IPR019979 Ribosomal protein S17, conserved site AMED_0687 IPR019972 Ribosomal protein L14P, conserved site AMED_0687 IPR005745 Ribosomal protein L14P, bacterial-type AMED_0687 IPR000218 Ribosomal protein L14P AMED_0687 IPR036853 Ribosomal protein L14 superfamily AMED_0688 IPR008991 Translation protein SH3-like domain superfamily AMED_0688 IPR003256 Ribosomal protein L24 AMED_0688 IPR014722 Ribosomal protein L2, domain 2 AMED_0688 IPR041988 Ribosomal Protein L26/L24, KOW domain AMED_0688 IPR005824 KOW AMED_0688 IPR005825 Ribosomal protein L24/L26, conserved site AMED_0689 IPR022803 Ribosomal protein L5 domain superfamily AMED_0689 IPR031309 Ribosomal protein L5, C-terminal AMED_0689 IPR031310 Ribosomal protein L5, N-terminal AMED_0689 IPR020930 Ribosomal protein L5, bacterial-type AMED_0689 IPR002132 Ribosomal protein L5 AMED_0690 IPR018271 Ribosomal protein S14, conserved site AMED_0690 IPR023053 Ribosomal protein S14, type Z AMED_0690 IPR001209 Ribosomal protein S14 AMED_0691 IPR035987 Ribosomal protein S8 superfamily AMED_0691 IPR000630 Ribosomal protein S8 AMED_0692 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AMED_0692 IPR000702 Ribosomal protein L6 AMED_0692 IPR020040 Ribosomal protein L6, alpha-beta domain AMED_0692 IPR019906 Ribosomal protein L6, bacterial-type AMED_0692 IPR002358 Ribosomal protein L6, conserved site AMED_0693 IPR005484 Ribosomal protein L18 AMED_0693 IPR004389 Ribosomal protein L18, bacterial-type AMED_0694 IPR013810 Ribosomal protein S5, N-terminal AMED_0694 IPR005712 Ribosomal protein S5, bacterial-type AMED_0694 IPR005324 Ribosomal protein S5, C-terminal AMED_0694 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_0694 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_0694 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMED_0694 IPR000851 Ribosomal protein S5 AMED_0695 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMED_0695 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMED_0695 IPR005996 Ribosomal protein L30, bacterial-type AMED_0695 IPR018038 Ribosomal protein L30, conserved site AMED_0696 IPR036227 Ribosomal L18e/L15P superfamily AMED_0696 IPR030878 Ribosomal protein L15 AMED_0696 IPR005749 Ribosomal protein L15, bacterial-type AMED_0696 IPR001196 Ribosomal protein L15, conserved site AMED_0696 IPR021131 Ribosomal protein L18e/L15P AMED_0698 IPR001123 Amino acid exporter protein, LeuE-type AMED_0699 IPR026593 Protein translocase subunit SecY AMED_0699 IPR002208 SecY/SEC61-alpha family AMED_0699 IPR030659 SecY conserved site AMED_0699 IPR023201 SecY domain superfamily AMED_0700 IPR033690 Adenylate kinase, conserved site AMED_0700 IPR000850 Adenylate kinase/UMP-CMP kinase AMED_0700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0701 IPR036005 Creatinase/aminopeptidase-like AMED_0701 IPR000994 Peptidase M24 AMED_0701 IPR001714 Peptidase M24, methionine aminopeptidase AMED_0701 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AMED_0702 IPR012340 Nucleic acid-binding, OB-fold AMED_0702 IPR006196 RNA-binding domain, S1, IF1 type AMED_0702 IPR004368 Translation initiation factor IF-1 AMED_0703 IPR035977 Ribosomal protein L36 superfamily AMED_0703 IPR000473 Ribosomal protein L36 AMED_0704 IPR018269 Ribosomal protein S13, conserved site AMED_0704 IPR027437 30s ribosomal protein S13, C-terminal AMED_0704 IPR001892 Ribosomal protein S13 AMED_0704 IPR010979 Ribosomal protein S13-like, H2TH AMED_0704 IPR019980 Ribosomal protein S13, bacterial-type AMED_0706 IPR001971 Ribosomal protein S11 AMED_0706 IPR036967 Ribosomal protein S11 superfamily AMED_0706 IPR018102 Ribosomal S11, conserved site AMED_0706 IPR019981 Ribosomal protein S11, bacterial-type AMED_0707 IPR036986 RNA-binding S4 domain superfamily AMED_0707 IPR002942 RNA-binding S4 domain AMED_0707 IPR018079 Ribosomal protein S4, conserved site AMED_0707 IPR005709 Ribosomal protein S4, bacterial-type AMED_0707 IPR001912 Ribosomal protein S4/S9, N-terminal AMED_0707 IPR022801 Ribosomal protein S4/S9 AMED_0708 IPR011260 RNA polymerase, alpha subunit, C-terminal AMED_0708 IPR036643 DNA-directed RNA polymerase, insert domain superfamily AMED_0708 IPR036603 RNA polymerase, RBP11-like subunit AMED_0708 IPR011773 DNA-directed RNA polymerase, alpha subunit AMED_0708 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AMED_0708 IPR011262 DNA-directed RNA polymerase, insert domain AMED_0709 IPR000456 Ribosomal protein L17 AMED_0709 IPR036373 Ribosomal protein L17 superfamily AMED_0710 IPR020095 Pseudouridine synthase I, TruA, C-terminal AMED_0710 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AMED_0710 IPR001406 Pseudouridine synthase I, TruA AMED_0710 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMED_0714 IPR007795 Type VII secretion system EccB AMED_0717 IPR023834 Type VII secretion system peptidase S8A, mycosin AMED_0717 IPR000209 Peptidase S8/S53 domain AMED_0717 IPR036852 Peptidase S8/S53 domain superfamily AMED_0717 IPR015500 Peptidase S8, subtilisin-related AMED_0717 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_0719 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0719 IPR002543 FtsK domain AMED_0719 IPR023837 EccCb-like, Actinobacteria AMED_0719 IPR023836 EccCa-like, Actinobacteria AMED_0719 IPR003593 AAA+ ATPase domain AMED_0720 IPR012725 Chaperone DnaK AMED_0720 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMED_0720 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMED_0720 IPR018181 Heat shock protein 70, conserved site AMED_0720 IPR013126 Heat shock protein 70 family AMED_0724 IPR025637 Domain of unknown function DUF4333 AMED_0726 IPR005823 Ribosomal protein L13, bacterial-type AMED_0726 IPR005822 Ribosomal protein L13 AMED_0726 IPR036899 Ribosomal protein L13 superfamily AMED_0726 IPR023563 Ribosomal protein L13, conserved site AMED_0727 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_0727 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_0727 IPR000754 Ribosomal protein S9 AMED_0727 IPR023035 Ribosomal protein S9, bacterial/plastid AMED_0727 IPR020574 Ribosomal protein S9, conserved site AMED_0728 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMED_0728 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMED_0728 IPR016066 Alpha-D-phosphohexomutase, conserved site AMED_0728 IPR006352 Phosphoglucosamine mutase, bacterial type AMED_0728 IPR005841 Alpha-D-phosphohexomutase superfamily AMED_0728 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMED_0728 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMED_0728 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMED_0728 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMED_0730 IPR042099 AMP-dependent synthetase-like superfamily AMED_0730 IPR000873 AMP-dependent synthetase/ligase AMED_0736 IPR001347 Sugar isomerase (SIS) AMED_0736 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AMED_0736 IPR035490 GlmS/FrlB, SIS domain 2 AMED_0736 IPR035466 GlmS/AgaS, SIS domain 1 AMED_0736 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_0736 IPR017932 Glutamine amidotransferase type 2 domain AMED_0737 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AMED_0737 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AMED_0737 IPR029056 Ribokinase-like AMED_0737 IPR004443 YjeF N-terminal domain AMED_0737 IPR036652 YjeF N-terminal domain superfamily AMED_0737 IPR017953 Carbohydrate kinase, predicted, conserved site AMED_0738 IPR037171 NagB/RpiA transferase-like AMED_0738 IPR036390 Winged helix DNA-binding domain superfamily AMED_0738 IPR014036 DeoR C-terminal sensor domain AMED_0738 IPR001034 DeoR-type HTH domain AMED_0738 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMED_0738 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0739 IPR006000 Xylulokinase AMED_0739 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMED_0739 IPR018483 Carbohydrate kinase, FGGY, conserved site AMED_0739 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMED_0739 IPR000577 Carbohydrate kinase, FGGY AMED_0740 IPR040582 MalK, OB fold domain AMED_0740 IPR003593 AAA+ ATPase domain AMED_0740 IPR008995 Molybdate/tungstate binding, C-terminal AMED_0740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0740 IPR017871 ABC transporter, conserved site AMED_0740 IPR003439 ABC transporter-like AMED_0741 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_0741 IPR029066 PLP-binding barrel AMED_0741 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AMED_0741 IPR001608 Alanine racemase, N-terminal AMED_0741 IPR011079 Alanine racemase, C-terminal AMED_0741 IPR000821 Alanine racemase AMED_0742 IPR011053 Single hybrid motif AMED_0742 IPR000089 Biotin/lipoyl attachment AMED_0742 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMED_0742 IPR029058 Alpha/Beta hydrolase fold AMED_0742 IPR000073 Alpha/beta hydrolase fold-1 AMED_0743 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0743 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AMED_0745 IPR041010 Acetyl-coA carboxylase zinc finger domain AMED_0745 IPR029045 ClpP/crotonase-like domain superfamily AMED_0745 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMED_0745 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMED_0745 IPR001095 Acetyl-CoA carboxylase, alpha subunit AMED_0745 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AMED_0745 IPR034733 Acetyl-CoA carboxylase AMED_0746 IPR042099 AMP-dependent synthetase-like superfamily AMED_0746 IPR000873 AMP-dependent synthetase/ligase AMED_0746 IPR020845 AMP-binding, conserved site AMED_0746 IPR025110 AMP-binding enzyme, C-terminal domain AMED_0746 IPR020459 AMP-binding AMED_0747 IPR000905 Gcp-like domain AMED_0747 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB AMED_0748 IPR006464 N-acetyltransferase RimI/Ard1 AMED_0748 IPR000182 GNAT domain AMED_0748 IPR016181 Acyl-CoA N-acyltransferase AMED_0749 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AMED_0749 IPR017860 Peptidase M22, conserved site AMED_0749 IPR017861 Kae1/TsaD family AMED_0749 IPR000905 Gcp-like domain AMED_0750 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain AMED_0750 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like AMED_0754 IPR029044 Nucleotide-diphospho-sugar transferases AMED_0756 IPR026669 Arsenite methyltransferase-like AMED_0756 IPR025714 Methyltransferase domain AMED_0756 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0757 IPR011991 ArsR-like helix-turn-helix domain AMED_0757 IPR036390 Winged helix DNA-binding domain superfamily AMED_0757 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0757 IPR001845 HTH ArsR-type DNA-binding domain AMED_0758 IPR023485 Phosphotyrosine protein phosphatase I AMED_0758 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMED_0759 IPR004706 Arsenical-resistance protein Acr3 AMED_0759 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AMED_0759 IPR038770 Sodium/solute symporter superfamily AMED_0760 IPR011991 ArsR-like helix-turn-helix domain AMED_0760 IPR001845 HTH ArsR-type DNA-binding domain AMED_0760 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0760 IPR036390 Winged helix DNA-binding domain superfamily AMED_0761 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_0761 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_0761 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_0762 IPR037124 GroES chaperonin superfamily AMED_0762 IPR020818 GroES chaperonin family AMED_0762 IPR018369 Chaperonin GroES, conserved site AMED_0762 IPR011032 GroES-like superfamily AMED_0763 IPR001844 Chaperonin Cpn60 AMED_0763 IPR002423 Chaperonin Cpn60/TCP-1 family AMED_0763 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMED_0763 IPR027409 GroEL-like apical domain superfamily AMED_0763 IPR018370 Chaperonin Cpn60, conserved site AMED_0763 IPR027413 GroEL-like equatorial domain superfamily AMED_0764 IPR003482 Transcription factor WhiB AMED_0764 IPR034768 WhiB-like iron-sulfur binding domain AMED_0767 IPR000792 Transcription regulator LuxR, C-terminal AMED_0767 IPR001789 Signal transduction response regulator, receiver domain AMED_0767 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0767 IPR011006 CheY-like superfamily AMED_0768 IPR039425 RNA polymerase sigma-70 like AMED_0768 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0768 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_0768 IPR007627 RNA polymerase sigma-70 region 2 AMED_0768 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_0768 IPR013325 RNA polymerase sigma factor, region 2 AMED_0768 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0768 IPR014284 RNA polymerase sigma-70 like domain AMED_0770 IPR035165 Protein of unknown function DUF5319 AMED_0771 IPR013785 Aldolase-type TIM barrel AMED_0771 IPR000644 CBS domain AMED_0771 IPR005990 Inosine-5'-monophosphate dehydrogenase AMED_0771 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AMED_0771 IPR001093 IMP dehydrogenase/GMP reductase AMED_0773 IPR013785 Aldolase-type TIM barrel AMED_0773 IPR001093 IMP dehydrogenase/GMP reductase AMED_0773 IPR005992 IMP dehydrogenase-related 2 AMED_0775 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0775 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_0777 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_0777 IPR016166 FAD-binding domain, PCMH-type AMED_0777 IPR012951 Berberine/berberine-like AMED_0777 IPR006094 FAD linked oxidase, N-terminal AMED_0777 IPR036318 FAD-binding, type PCMH-like superfamily AMED_0778 IPR016161 Aldehyde/histidinol dehydrogenase AMED_0778 IPR017656 Putative phosphonoacetaldehyde dehydrogenase AMED_0778 IPR015590 Aldehyde dehydrogenase domain AMED_0778 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_0778 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_0778 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_0779 IPR036291 NAD(P)-binding domain superfamily AMED_0779 IPR011032 GroES-like superfamily AMED_0779 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_0779 IPR027399 Alcohol dehydrogenase GroES-associated AMED_0779 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0779 IPR013149 Alcohol dehydrogenase, C-terminal AMED_0782 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_0782 IPR025777 GMP synthetase ATP pyrophosphatase domain AMED_0782 IPR022955 GMP synthase AMED_0782 IPR022310 NAD/GMP synthase AMED_0782 IPR001674 GMP synthase, C-terminal AMED_0782 IPR017926 Glutamine amidotransferase AMED_0782 IPR029062 Class I glutamine amidotransferase-like AMED_0782 IPR004739 GMP synthase, glutamine amidotransferase AMED_0785 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0785 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0785 IPR036291 NAD(P)-binding domain superfamily AMED_0788 IPR011006 CheY-like superfamily AMED_0788 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0788 IPR000792 Transcription regulator LuxR, C-terminal AMED_0788 IPR001789 Signal transduction response regulator, receiver domain AMED_0789 IPR004779 Carboxylate/Amino Acid/Amine Transporter AMED_0789 IPR000620 EamA domain AMED_0790 IPR000847 Transcription regulator HTH, LysR AMED_0790 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0790 IPR036390 Winged helix DNA-binding domain superfamily AMED_0790 IPR005119 LysR, substrate-binding AMED_0791 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_0791 IPR016236 Serine/threonine-protein kinase PknK, predicted AMED_0791 IPR041664 Orc1-like, AAA ATPase domain AMED_0791 IPR017441 Protein kinase, ATP binding site AMED_0791 IPR000719 Protein kinase domain AMED_0791 IPR011009 Protein kinase-like domain superfamily AMED_0791 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0792 IPR008271 Serine/threonine-protein kinase, active site AMED_0792 IPR011009 Protein kinase-like domain superfamily AMED_0792 IPR005543 PASTA domain AMED_0792 IPR017441 Protein kinase, ATP binding site AMED_0792 IPR000719 Protein kinase domain AMED_0796 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal AMED_0796 IPR036979 Chorismate mutase domain superfamily AMED_0796 IPR036263 Chorismate mutase type II superfamily AMED_0796 IPR002701 Chorismate mutase II, prokaryotic-type AMED_0798 IPR014016 UvrD-like helicase, ATP-binding domain AMED_0798 IPR034739 UvrD/AddA helicase, N-terminal AMED_0798 IPR000212 DNA helicase, UvrD/REP type AMED_0798 IPR014017 UvrD-like DNA helicase, C-terminal AMED_0798 IPR005751 ATP-dependent DNA helicase PcrA AMED_0798 IPR013986 DExx box DNA helicase domain superfamily AMED_0798 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0799 IPR036779 LysM domain superfamily AMED_0799 IPR016047 Peptidase M23 AMED_0799 IPR018392 LysM domain AMED_0799 IPR011055 Duplicated hybrid motif AMED_0802 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AMED_0802 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMED_0802 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AMED_0802 IPR013815 ATP-grasp fold, subdomain 1 AMED_0802 IPR016102 Succinyl-CoA synthetase-like AMED_0802 IPR005809 Succinate--CoA synthetase, beta subunit AMED_0802 IPR011761 ATP-grasp fold AMED_0803 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMED_0803 IPR003781 CoA-binding AMED_0803 IPR016102 Succinyl-CoA synthetase-like AMED_0803 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMED_0803 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMED_0803 IPR005810 Succinyl-CoA ligase, alpha subunit AMED_0803 IPR036291 NAD(P)-binding domain superfamily AMED_0806 IPR002376 Formyl transferase, N-terminal AMED_0806 IPR004607 Phosphoribosylglycinamide formyltransferase AMED_0806 IPR036477 Formyl transferase, N-terminal domain superfamily AMED_0807 IPR036914 Methylglyoxal synthase-like domain superfamily AMED_0807 IPR016193 Cytidine deaminase-like AMED_0807 IPR024051 AICAR transformylase, duplicated domain superfamily AMED_0807 IPR002695 Bifunctional purine biosynthesis protein PurH-like AMED_0807 IPR011607 Methylglyoxal synthase-like domain AMED_0815 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMED_0815 IPR023073 DNA polymerase, error-prone AMED_0815 IPR004013 PHP domain AMED_0815 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_0815 IPR029460 DNA polymerase, helix-hairpin-helix motif AMED_0815 IPR016195 Polymerase/histidinol phosphatase-like AMED_0815 IPR040982 DNA polymerase III alpha subunit finger domain AMED_0815 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AMED_0815 IPR004805 DNA polymerase III, alpha subunit AMED_0816 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMED_0816 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0816 IPR013216 Methyltransferase type 11 AMED_0819 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AMED_0819 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMED_0819 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMED_0819 IPR036291 NAD(P)-binding domain superfamily AMED_0821 IPR011701 Major facilitator superfamily AMED_0821 IPR020846 Major facilitator superfamily domain AMED_0821 IPR036259 MFS transporter superfamily AMED_0822 IPR036390 Winged helix DNA-binding domain superfamily AMED_0822 IPR011991 ArsR-like helix-turn-helix domain AMED_0822 IPR001845 HTH ArsR-type DNA-binding domain AMED_0822 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0823 IPR011701 Major facilitator superfamily AMED_0823 IPR020846 Major facilitator superfamily domain AMED_0823 IPR036259 MFS transporter superfamily AMED_0825 IPR029028 Alpha/beta knot methyltransferases AMED_0825 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_0825 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase AMED_0825 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMED_0825 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal AMED_0830 IPR013216 Methyltransferase type 11 AMED_0830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0830 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMED_0833 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AMED_0833 IPR004790 Isocitrate dehydrogenase NADP-dependent AMED_0833 IPR024084 Isopropylmalate dehydrogenase-like domain AMED_0837 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_0837 IPR001279 Metallo-beta-lactamase AMED_0840 IPR002306 Tryptophan-tRNA ligase AMED_0840 IPR024109 Tryptophan-tRNA ligase, bacterial-type AMED_0840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_0840 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_0840 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMED_0841 IPR011009 Protein kinase-like domain superfamily AMED_0841 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0842 IPR017039 Virulence factor BrkB AMED_0842 IPR005274 Inner membrane protein YhjD AMED_0844 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0844 IPR011991 ArsR-like helix-turn-helix domain AMED_0844 IPR036390 Winged helix DNA-binding domain superfamily AMED_0844 IPR002577 Helix-turn-helix, HxlR type AMED_0845 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMED_0845 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMED_0845 IPR012338 Beta-lactamase/transpeptidase-like AMED_0847 IPR036852 Peptidase S8/S53 domain superfamily AMED_0847 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_0847 IPR022398 Peptidase S8, subtilisin, His-active site AMED_0847 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_0847 IPR000209 Peptidase S8/S53 domain AMED_0847 IPR015500 Peptidase S8, subtilisin-related AMED_0847 IPR034202 Subtilisin Carlsberg-like catalytic domain AMED_0849 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AMED_0849 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_0849 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_0849 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_0849 IPR009051 Alpha-helical ferredoxin AMED_0849 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_0849 IPR012675 Beta-grasp domain superfamily AMED_0849 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AMED_0850 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0850 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMED_0850 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_0850 IPR011281 Succinate dehydrogenase, flavoprotein subunit AMED_0850 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AMED_0850 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AMED_0850 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_0850 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMED_0852 IPR039023 Succinate dehydrogenase membrane subunit SdhC, prokaryotes AMED_0852 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AMED_0852 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AMED_0852 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AMED_0853 IPR013785 Aldolase-type TIM barrel AMED_0853 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_0853 IPR002241 Glycoside hydrolase, family 27 AMED_0853 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_0853 IPR013780 Glycosyl hydrolase, all-beta AMED_0853 IPR017853 Glycoside hydrolase superfamily AMED_0854 IPR013785 Aldolase-type TIM barrel AMED_0854 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain AMED_0854 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_0854 IPR019563 Glycosyl-hydrolase 97, catalytic domain AMED_0854 IPR029486 Glycosyl-hydrolase 97, N-terminal domain AMED_0854 IPR013780 Glycosyl hydrolase, all-beta AMED_0854 IPR017853 Glycoside hydrolase superfamily AMED_0855 IPR003760 ABC transporter substrate-binding protein PnrA-like AMED_0855 IPR028082 Periplasmic binding protein-like I AMED_0856 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0856 IPR003593 AAA+ ATPase domain AMED_0856 IPR003439 ABC transporter-like AMED_0856 IPR017871 ABC transporter, conserved site AMED_0858 IPR001851 ABC transporter, permease AMED_0859 IPR016193 Cytidine deaminase-like AMED_0859 IPR002125 Cytidine and deoxycytidylate deaminase domain AMED_0860 IPR017459 Glycosyl transferase family 3, N-terminal domain AMED_0860 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMED_0860 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMED_0860 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily AMED_0860 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal AMED_0860 IPR000312 Glycosyl transferase, family 3 AMED_0860 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic AMED_0860 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site AMED_0860 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase AMED_0862 IPR001365 Adenosine/AMP deaminase domain AMED_0862 IPR028893 Adenosine deaminase AMED_0862 IPR032466 Metal-dependent hydrolase AMED_0862 IPR006330 Adenosine/adenine deaminase AMED_0863 IPR036259 MFS transporter superfamily AMED_0863 IPR020846 Major facilitator superfamily domain AMED_0863 IPR011701 Major facilitator superfamily AMED_0865 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal AMED_0865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0865 IPR001650 Helicase, C-terminal AMED_0865 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_0865 IPR011545 DEAD/DEAH box helicase domain AMED_0868 IPR036390 Winged helix DNA-binding domain superfamily AMED_0868 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0868 IPR002577 Helix-turn-helix, HxlR type AMED_0870 IPR013154 Alcohol dehydrogenase, N-terminal AMED_0870 IPR011032 GroES-like superfamily AMED_0870 IPR013149 Alcohol dehydrogenase, C-terminal AMED_0870 IPR036291 NAD(P)-binding domain superfamily AMED_0870 IPR020843 Polyketide synthase, enoylreductase domain AMED_0870 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_0872 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0872 IPR035906 MetI-like superfamily AMED_0873 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_0873 IPR035906 MetI-like superfamily AMED_0874 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS AMED_0874 IPR029058 Alpha/Beta hydrolase fold AMED_0874 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_0874 IPR020802 Polyketide synthase, thioesterase domain AMED_0874 IPR001031 Thioesterase AMED_0875 IPR036396 Cytochrome P450 superfamily AMED_0875 IPR002397 Cytochrome P450, B-class AMED_0875 IPR017972 Cytochrome P450, conserved site AMED_0875 IPR001128 Cytochrome P450 AMED_0876 IPR001128 Cytochrome P450 AMED_0876 IPR036396 Cytochrome P450 superfamily AMED_0876 IPR017972 Cytochrome P450, conserved site AMED_0876 IPR002397 Cytochrome P450, B-class AMED_0880 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_0880 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_0880 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_0880 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_0880 IPR016161 Aldehyde/histidinol dehydrogenase AMED_0880 IPR015590 Aldehyde dehydrogenase domain AMED_0881 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMED_0881 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_0881 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_0881 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_0881 IPR016161 Aldehyde/histidinol dehydrogenase AMED_0881 IPR015590 Aldehyde dehydrogenase domain AMED_0882 IPR002915 DeoC/FbaB/ lacD aldolase AMED_0882 IPR023649 Deoxyribose-phosphate aldolase type II AMED_0882 IPR011343 Deoxyribose-phosphate aldolase AMED_0882 IPR013785 Aldolase-type TIM barrel AMED_0885 IPR000836 Phosphoribosyltransferase domain AMED_0885 IPR029057 Phosphoribosyltransferase-like AMED_0885 IPR034332 Uracil phosphoribosyltransferase, bacterial-type AMED_0885 IPR005765 Uracil phosphoribosyl transferase AMED_0887 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0887 IPR039425 RNA polymerase sigma-70 like AMED_0887 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0887 IPR014284 RNA polymerase sigma-70 like domain AMED_0887 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_0887 IPR013325 RNA polymerase sigma factor, region 2 AMED_0887 IPR007627 RNA polymerase sigma-70 region 2 AMED_0887 IPR007630 RNA polymerase sigma-70 region 4 AMED_0890 IPR010211 Redox-sensitive transcriptional activator SoxR AMED_0890 IPR000551 MerR-type HTH domain AMED_0890 IPR015358 Transcription regulator MerR, DNA binding AMED_0890 IPR009061 Putative DNA-binding domain superfamily AMED_0891 IPR020471 Aldo/keto reductase AMED_0891 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_0891 IPR023210 NADP-dependent oxidoreductase domain AMED_0893 IPR013785 Aldolase-type TIM barrel AMED_0893 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AMED_0893 IPR037396 FMN hydroxy acid dehydrogenase domain AMED_0893 IPR000262 FMN-dependent dehydrogenase AMED_0893 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AMED_0895 IPR006153 Cation/H+ exchanger AMED_0895 IPR038770 Sodium/solute symporter superfamily AMED_0896 IPR011006 CheY-like superfamily AMED_0896 IPR001789 Signal transduction response regulator, receiver domain AMED_0896 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0896 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_0896 IPR039420 Transcriptional regulatory protein WalR-like AMED_0897 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_0897 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_0897 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_0897 IPR005467 Histidine kinase domain AMED_0897 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0897 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0897 IPR003660 HAMP domain AMED_0899 IPR036621 Anticodon-binding domain superfamily AMED_0899 IPR015807 Histidine-tRNA ligase AMED_0899 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AMED_0899 IPR004154 Anticodon-binding AMED_0899 IPR033656 Histidyl-anticodon-binding AMED_0899 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AMED_0899 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_0901 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_0901 IPR023512 Deaminase MtaD/DadD AMED_0901 IPR006680 Amidohydrolase-related AMED_0901 IPR032466 Metal-dependent hydrolase AMED_0906 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMED_0906 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMED_0906 IPR016066 Alpha-D-phosphohexomutase, conserved site AMED_0906 IPR005841 Alpha-D-phosphohexomutase superfamily AMED_0906 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMED_0906 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMED_0906 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMED_0906 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMED_0907 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase AMED_0907 IPR006326 UDP-glycosyltransferase, MGT AMED_0908 IPR018099 Purine phosphorylase, family 2, conserved site AMED_0908 IPR011268 Purine nucleoside phosphorylase AMED_0908 IPR011269 Putative purine nucleotide phosphorylase AMED_0908 IPR035994 Nucleoside phosphorylase superfamily AMED_0908 IPR000845 Nucleoside phosphorylase domain AMED_0912 IPR011009 Protein kinase-like domain superfamily AMED_0912 IPR000719 Protein kinase domain AMED_0912 IPR008271 Serine/threonine-protein kinase, active site AMED_0913 IPR004608 Methylmalonyl-CoA mutase, beta chain AMED_0913 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AMED_0913 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic AMED_0914 IPR006159 Methylmalonyl-CoA mutase, C-terminal AMED_0914 IPR006158 Cobalamin (vitamin B12)-binding domain AMED_0914 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic AMED_0914 IPR036724 Cobalamin-binding domain superfamily AMED_0914 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic AMED_0914 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AMED_0915 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB AMED_0915 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_0917 IPR011793 Putative glutamate--cysteine ligase YbdK AMED_0917 IPR002933 Peptidase M20 AMED_0917 IPR017439 Amidohydrolase AMED_0917 IPR036264 Bacterial exopeptidase dimerisation domain AMED_0917 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_0917 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_0920 IPR023753 FAD/NAD(P)-binding domain AMED_0920 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_0920 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0920 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_0920 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_0924 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_0924 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_0924 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_0924 IPR041581 Glyoxalase-like domain, group 6 AMED_0925 IPR005999 Glycerol kinase AMED_0925 IPR018483 Carbohydrate kinase, FGGY, conserved site AMED_0925 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMED_0925 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMED_0925 IPR000577 Carbohydrate kinase, FGGY AMED_0926 IPR000425 Major intrinsic protein AMED_0926 IPR023271 Aquaporin-like AMED_0926 IPR022357 Major intrinsic protein, conserved site AMED_0927 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0927 IPR006076 FAD dependent oxidoreductase AMED_0927 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily AMED_0927 IPR031656 Alpha-glycerophosphate oxidase, C-terminal AMED_0927 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AMED_0934 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_0934 IPR001882 Biotin-binding site AMED_0934 IPR011764 Biotin carboxylation domain AMED_0934 IPR005482 Biotin carboxylase, C-terminal AMED_0934 IPR000089 Biotin/lipoyl attachment AMED_0934 IPR011761 ATP-grasp fold AMED_0934 IPR016185 Pre-ATP-grasp domain superfamily AMED_0934 IPR011054 Rudiment single hybrid motif AMED_0934 IPR005481 Biotin carboxylase-like, N-terminal domain AMED_0934 IPR011053 Single hybrid motif AMED_0937 IPR001991 Sodium:dicarboxylate symporter AMED_0937 IPR018107 Sodium:dicarboxylate symporter, conserved site AMED_0937 IPR036458 Sodium:dicarboxylate symporter superfamily AMED_0937 IPR023954 C4-dicarboxylate transport protein AMED_0938 IPR029001 Inosine triphosphate pyrophosphatase-like AMED_0938 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AMED_0939 IPR013783 Immunoglobulin-like fold AMED_0939 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_0939 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_0939 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_0939 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_0939 IPR019800 Glycoside hydrolase, family 3, active site AMED_0939 IPR026891 Fibronectin type III-like domain AMED_0939 IPR017853 Glycoside hydrolase superfamily AMED_0940 IPR004638 Drug resistance transporter EmrB-like AMED_0940 IPR011701 Major facilitator superfamily AMED_0940 IPR036259 MFS transporter superfamily AMED_0940 IPR020846 Major facilitator superfamily domain AMED_0943 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase AMED_0943 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMED_0943 IPR011251 Luciferase-like domain AMED_0943 IPR036661 Luciferase-like domain superfamily AMED_0944 IPR000835 MarR-type HTH domain AMED_0944 IPR023187 Transcriptional regulator MarR-type, conserved site AMED_0944 IPR012712 HTH-type transcriptional regulator HpaR/FarR AMED_0944 IPR036390 Winged helix DNA-binding domain superfamily AMED_0944 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0946 IPR034733 Acetyl-CoA carboxylase AMED_0946 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AMED_0946 IPR029045 ClpP/crotonase-like domain superfamily AMED_0946 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMED_0946 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMED_0948 IPR001789 Signal transduction response regulator, receiver domain AMED_0948 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0948 IPR011006 CheY-like superfamily AMED_0948 IPR000792 Transcription regulator LuxR, C-terminal AMED_0949 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0949 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_0953 IPR001647 DNA-binding HTH domain, TetR-type AMED_0953 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_0953 IPR009057 Homeobox-like domain superfamily AMED_0954 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0954 IPR002938 FAD-binding domain AMED_0955 IPR002577 Helix-turn-helix, HxlR type AMED_0955 IPR036390 Winged helix DNA-binding domain superfamily AMED_0955 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0957 IPR036291 NAD(P)-binding domain superfamily AMED_0957 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_0957 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_0958 IPR018062 HTH domain AraC-type, conserved site AMED_0958 IPR018060 DNA binding HTH domain, AraC-type AMED_0958 IPR009057 Homeobox-like domain superfamily AMED_0958 IPR002818 DJ-1/PfpI AMED_0958 IPR029062 Class I glutamine amidotransferase-like AMED_0960 IPR005119 LysR, substrate-binding AMED_0960 IPR000847 Transcription regulator HTH, LysR AMED_0960 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0960 IPR036390 Winged helix DNA-binding domain superfamily AMED_0963 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_0963 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_0963 IPR004033 UbiE/COQ5 methyltransferase AMED_0965 IPR014284 RNA polymerase sigma-70 like domain AMED_0965 IPR013325 RNA polymerase sigma factor, region 2 AMED_0965 IPR032710 NTF2-like domain superfamily AMED_0965 IPR007627 RNA polymerase sigma-70 region 2 AMED_0965 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_0965 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0965 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_0966 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_0966 IPR023753 FAD/NAD(P)-binding domain AMED_0966 IPR013785 Aldolase-type TIM barrel AMED_0966 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMED_0970 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_0970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0971 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0971 IPR011006 CheY-like superfamily AMED_0971 IPR000792 Transcription regulator LuxR, C-terminal AMED_0971 IPR001789 Signal transduction response regulator, receiver domain AMED_0972 IPR018392 LysM domain AMED_0972 IPR036779 LysM domain superfamily AMED_0972 IPR003646 SH3-like domain, bacterial-type AMED_0972 IPR038765 Papain-like cysteine peptidase superfamily AMED_0972 IPR000064 Endopeptidase, NLPC/P60 domain AMED_0973 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMED_0973 IPR003142 Biotin protein ligase, C-terminal AMED_0973 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AMED_0975 IPR000891 Pyruvate carboxyltransferase AMED_0975 IPR013785 Aldolase-type TIM barrel AMED_0978 IPR008928 Six-hairpin glycosidase superfamily AMED_0978 IPR005887 Alpha-1,2-mannosidase, putative AMED_0978 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_0978 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_0978 IPR012939 Glycosyl hydrolase family 92 AMED_0979 IPR000760 Inositol monophosphatase-like AMED_0979 IPR020583 Inositol monophosphatase, metal-binding site AMED_0979 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase AMED_0980 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_0980 IPR001789 Signal transduction response regulator, receiver domain AMED_0980 IPR039420 Transcriptional regulatory protein WalR-like AMED_0980 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0980 IPR011006 CheY-like superfamily AMED_0981 IPR003660 HAMP domain AMED_0981 IPR003594 Histidine kinase/HSP90-like ATPase AMED_0981 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_0981 IPR005467 Histidine kinase domain AMED_0981 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_0981 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_0981 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_0982 IPR000792 Transcription regulator LuxR, C-terminal AMED_0982 IPR001789 Signal transduction response regulator, receiver domain AMED_0982 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0982 IPR011006 CheY-like superfamily AMED_0983 IPR000792 Transcription regulator LuxR, C-terminal AMED_0983 IPR011006 CheY-like superfamily AMED_0983 IPR016032 Signal transduction response regulator, C-terminal effector AMED_0983 IPR001789 Signal transduction response regulator, receiver domain AMED_0985 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_0985 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_0985 IPR020846 Major facilitator superfamily domain AMED_0985 IPR011701 Major facilitator superfamily AMED_0985 IPR036390 Winged helix DNA-binding domain superfamily AMED_0985 IPR036259 MFS transporter superfamily AMED_0985 IPR005829 Sugar transporter, conserved site AMED_0990 IPR018584 Glycosyltransferase family 87 AMED_0991 IPR018584 Glycosyltransferase family 87 AMED_0992 IPR011761 ATP-grasp fold AMED_0992 IPR016185 Pre-ATP-grasp domain superfamily AMED_0992 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMED_0992 IPR013815 ATP-grasp fold, subdomain 1 AMED_0992 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AMED_0992 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain AMED_0992 IPR011054 Rudiment single hybrid motif AMED_0993 IPR035893 PurE domain superfamily AMED_0993 IPR033747 Class I PurE AMED_0993 IPR024694 PurE, prokaryotic type AMED_0993 IPR000031 PurE domain AMED_0996 IPR042099 AMP-dependent synthetase-like superfamily AMED_0996 IPR000873 AMP-dependent synthetase/ligase AMED_0996 IPR025110 AMP-binding enzyme, C-terminal domain AMED_0996 IPR020845 AMP-binding, conserved site AMED_0997 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_0997 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_0997 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_0997 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_0997 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_0997 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_0997 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_1004 IPR036291 NAD(P)-binding domain superfamily AMED_1004 IPR016040 NAD(P)-binding domain AMED_1005 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_1005 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain AMED_1006 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_1006 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain AMED_1007 IPR016040 NAD(P)-binding domain AMED_1007 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1007 IPR005888 dTDP-glucose 4,6-dehydratase AMED_1007 IPR036291 NAD(P)-binding domain superfamily AMED_1008 IPR029903 RmlD-like substrate binding domain AMED_1008 IPR036291 NAD(P)-binding domain superfamily AMED_1008 IPR005913 dTDP-4-dehydrorhamnose reductase family AMED_1009 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_1009 IPR001296 Glycosyl transferase, family 1 AMED_1010 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1012 IPR001296 Glycosyl transferase, family 1 AMED_1012 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_1012 IPR017814 Mycothiol biosynthesis protein, MshA AMED_1014 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1016 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1016 IPR005835 Nucleotidyl transferase domain AMED_1019 IPR036390 Winged helix DNA-binding domain superfamily AMED_1019 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1019 IPR000524 Transcription regulator HTH, GntR AMED_1022 IPR002847 Coenzyme F420:L-glutamate ligase-like domain AMED_1022 IPR008225 Coenzyme F420:L-glutamate ligase AMED_1022 IPR019943 Coenzyme F420 biosynthesis protein FbiB, C-terminal AMED_1022 IPR023661 Coenzyme F420:L-glutamate ligase, Actinobacteria AMED_1022 IPR029479 Nitroreductase AMED_1022 IPR000415 Nitroreductase-like AMED_1023 IPR010115 2-phospho-L-lactate transferase AMED_1023 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AMED_1026 IPR000813 7Fe ferredoxin AMED_1026 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_1026 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_1027 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1027 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1027 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1027 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ AMED_1027 IPR004839 Aminotransferase, class I/classII AMED_1029 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1029 IPR002938 FAD-binding domain AMED_1031 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family AMED_1031 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria AMED_1031 IPR001451 Hexapeptide repeat AMED_1031 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain AMED_1031 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily AMED_1031 IPR011004 Trimeric LpxA-like superfamily AMED_1033 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AMED_1033 IPR011650 Peptidase M20, dimerisation domain AMED_1033 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE AMED_1033 IPR002933 Peptidase M20 AMED_1033 IPR036264 Bacterial exopeptidase dimerisation domain AMED_1036 IPR002884 P domain AMED_1036 IPR008979 Galactose-binding-like domain superfamily AMED_1036 IPR007484 Peptidase M28 AMED_1036 IPR041756 Peptidase M28, SGAP-like AMED_1037 IPR001570 Peptidase M4, C-terminal AMED_1037 IPR013856 Peptidase M4 domain AMED_1037 IPR027268 Peptidase M4/M1, CTD superfamily AMED_1037 IPR007484 Peptidase M28 AMED_1037 IPR041756 Peptidase M28, SGAP-like AMED_1038 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_1038 IPR001387 Cro/C1-type helix-turn-helix domain AMED_1039 IPR007484 Peptidase M28 AMED_1039 IPR041756 Peptidase M28, SGAP-like AMED_1039 IPR013856 Peptidase M4 domain AMED_1039 IPR001570 Peptidase M4, C-terminal AMED_1039 IPR027268 Peptidase M4/M1, CTD superfamily AMED_1041 IPR031100 LOG family AMED_1041 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMED_1042 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMED_1042 IPR031100 LOG family AMED_1045 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1047 IPR002656 Acyltransferase 3 AMED_1047 IPR036514 SGNH hydrolase superfamily AMED_1050 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1050 IPR001173 Glycosyltransferase 2-like AMED_1051 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1051 IPR017871 ABC transporter, conserved site AMED_1051 IPR003439 ABC transporter-like AMED_1051 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_1051 IPR011917 ABC transporter, lipid A export, MsbA AMED_1051 IPR003593 AAA+ ATPase domain AMED_1051 IPR039421 Type I protein exporter AMED_1051 IPR011527 ABC transporter type 1, transmembrane domain AMED_1052 IPR039421 Type I protein exporter AMED_1052 IPR011527 ABC transporter type 1, transmembrane domain AMED_1052 IPR003593 AAA+ ATPase domain AMED_1052 IPR017871 ABC transporter, conserved site AMED_1052 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1052 IPR003439 ABC transporter-like AMED_1052 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_1052 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AMED_1053 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AMED_1054 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AMED_1059 IPR005019 Methyladenine glycosylase AMED_1059 IPR004597 DNA-3-methyladenine glycosylase I AMED_1059 IPR011257 DNA glycosylase AMED_1060 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB AMED_1060 IPR029045 ClpP/crotonase-like domain superfamily AMED_1060 IPR001753 Enoyl-CoA hydratase/isomerase AMED_1060 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_1062 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AMED_1062 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AMED_1062 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AMED_1062 IPR023042 Peptidase M17, leucine aminopeptidase AMED_1063 IPR036390 Winged helix DNA-binding domain superfamily AMED_1063 IPR005119 LysR, substrate-binding AMED_1063 IPR000847 Transcription regulator HTH, LysR AMED_1063 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1064 IPR011701 Major facilitator superfamily AMED_1064 IPR036259 MFS transporter superfamily AMED_1064 IPR020846 Major facilitator superfamily domain AMED_1066 IPR002935 Class I-like SAM-dependent O-methyltransferase AMED_1066 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1067 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1067 IPR007627 RNA polymerase sigma-70 region 2 AMED_1067 IPR014284 RNA polymerase sigma-70 like domain AMED_1067 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_1067 IPR013325 RNA polymerase sigma factor, region 2 AMED_1067 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1067 IPR039425 RNA polymerase sigma-70 like AMED_1069 IPR001478 PDZ domain AMED_1069 IPR036034 PDZ superfamily AMED_1069 IPR001940 Peptidase S1C AMED_1069 IPR009003 Peptidase S1, PA clan AMED_1070 IPR003369 Sec-independent protein translocase protein TatA/B/E AMED_1070 IPR018448 Twin-arginine translocation protein TatB AMED_1071 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMED_1071 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1071 IPR000808 Mrp, conserved site AMED_1071 IPR019591 Mrp/NBP35 ATP-binding protein AMED_1071 IPR002744 MIP18 family-like AMED_1071 IPR034904 Fe-S cluster assembly domain superfamily AMED_1073 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AMED_1073 IPR006669 Magnesium transporter MgtE AMED_1073 IPR000644 CBS domain AMED_1073 IPR006668 Magnesium transporter, MgtE intracellular domain AMED_1073 IPR038076 MgtE, N-terminal domain superfamily AMED_1073 IPR038048 Magnesium transporter MgtE, transmembrane domain AMED_1073 IPR006667 SLC41 divalent cation transporters, integral membrane domain AMED_1074 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMED_1074 IPR011009 Protein kinase-like domain superfamily AMED_1075 IPR018080 Band 7/stomatin-like, conserved site AMED_1075 IPR036013 Band 7/SPFH domain superfamily AMED_1075 IPR001107 Band 7 domain AMED_1075 IPR001972 Stomatin family AMED_1078 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_1078 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_1078 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_1078 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_1078 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_1078 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_1078 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_1080 IPR006059 Bacterial extracellular solute-binding protein AMED_1081 IPR035906 MetI-like superfamily AMED_1081 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1082 IPR035906 MetI-like superfamily AMED_1082 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1083 IPR040582 MalK, OB fold domain AMED_1083 IPR003439 ABC transporter-like AMED_1083 IPR008995 Molybdate/tungstate binding, C-terminal AMED_1083 IPR017871 ABC transporter, conserved site AMED_1083 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1083 IPR003593 AAA+ ATPase domain AMED_1086 IPR009057 Homeobox-like domain superfamily AMED_1086 IPR001647 DNA-binding HTH domain, TetR-type AMED_1086 IPR041642 HTH-type transcriptional repressor KstR, C-terminal AMED_1087 IPR020846 Major facilitator superfamily domain AMED_1087 IPR036259 MFS transporter superfamily AMED_1087 IPR005829 Sugar transporter, conserved site AMED_1087 IPR011701 Major facilitator superfamily AMED_1088 IPR000792 Transcription regulator LuxR, C-terminal AMED_1088 IPR011006 CheY-like superfamily AMED_1088 IPR001789 Signal transduction response regulator, receiver domain AMED_1088 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1089 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1089 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_1091 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1091 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_1091 IPR007627 RNA polymerase sigma-70 region 2 AMED_1091 IPR039425 RNA polymerase sigma-70 like AMED_1091 IPR014284 RNA polymerase sigma-70 like domain AMED_1091 IPR007630 RNA polymerase sigma-70 region 4 AMED_1091 IPR013325 RNA polymerase sigma factor, region 2 AMED_1091 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1096 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AMED_1096 IPR004488 Magnesium/cobalt transport protein CorA AMED_1099 IPR023214 HAD superfamily AMED_1099 IPR036412 HAD-like superfamily AMED_1099 IPR015797 NUDIX hydrolase-like domain superfamily AMED_1099 IPR020476 NUDIX hydrolase AMED_1099 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMED_1099 IPR020084 NUDIX hydrolase, conserved site AMED_1099 IPR000086 NUDIX hydrolase domain AMED_1102 IPR016195 Polymerase/histidinol phosphatase-like AMED_1102 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMED_1102 IPR004013 PHP domain AMED_1103 IPR002771 Multiple antibiotic resistance (MarC)-related AMED_1108 IPR011545 DEAD/DEAH box helicase domain AMED_1108 IPR030880 DEAD-box ATP-dependent RNA helicase CshA AMED_1108 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_1108 IPR001650 Helicase, C-terminal AMED_1108 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1108 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMED_1108 IPR014014 RNA helicase, DEAD-box type, Q motif AMED_1113 IPR009057 Homeobox-like domain superfamily AMED_1113 IPR001647 DNA-binding HTH domain, TetR-type AMED_1113 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1115 IPR029058 Alpha/Beta hydrolase fold AMED_1115 IPR000073 Alpha/beta hydrolase fold-1 AMED_1116 IPR009057 Homeobox-like domain superfamily AMED_1116 IPR001647 DNA-binding HTH domain, TetR-type AMED_1116 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1116 IPR019915 Transcription regulator, pyrimidine utilisation, RutR AMED_1116 IPR013573 Transcription regulator YcdC, C-terminal AMED_1117 IPR000073 Alpha/beta hydrolase fold-1 AMED_1117 IPR029058 Alpha/Beta hydrolase fold AMED_1117 IPR000639 Epoxide hydrolase-like AMED_1117 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase AMED_1119 IPR036873 Rhodanese-like domain superfamily AMED_1119 IPR000594 THIF-type NAD/FAD binding fold AMED_1119 IPR035985 Ubiquitin-activating enzyme AMED_1119 IPR001763 Rhodanese-like domain AMED_1121 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_1121 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_1121 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AMED_1121 IPR006656 Molybdopterin oxidoreductase AMED_1121 IPR006657 Molybdopterin dinucleotide-binding domain AMED_1121 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMED_1122 IPR023753 FAD/NAD(P)-binding domain AMED_1122 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMED_1122 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMED_1122 IPR007419 BFD-like [2Fe-2S]-binding domain AMED_1122 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMED_1122 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMED_1122 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMED_1122 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMED_1122 IPR017121 Nitrite reductase [NAD(P)H], large subunit AMED_1122 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1122 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_1122 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMED_1123 IPR036259 MFS transporter superfamily AMED_1123 IPR011701 Major facilitator superfamily AMED_1123 IPR004737 Nitrate transporter AMED_1124 IPR007419 BFD-like [2Fe-2S]-binding domain AMED_1124 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMED_1124 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1124 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMED_1124 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_1124 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMED_1124 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMED_1124 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMED_1124 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMED_1124 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMED_1124 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type AMED_1124 IPR023753 FAD/NAD(P)-binding domain AMED_1125 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMED_1125 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1125 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMED_1125 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMED_1125 IPR023753 FAD/NAD(P)-binding domain AMED_1125 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMED_1125 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMED_1125 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMED_1125 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMED_1125 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type AMED_1125 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_1125 IPR007419 BFD-like [2Fe-2S]-binding domain AMED_1130 IPR013196 Helix-turn-helix, type 11 AMED_1130 IPR001034 DeoR-type HTH domain AMED_1130 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1130 IPR036390 Winged helix DNA-binding domain superfamily AMED_1130 IPR026881 WYL domain AMED_1130 IPR028349 Protein PafC AMED_1133 IPR013986 DExx box DNA helicase domain superfamily AMED_1133 IPR014017 UvrD-like DNA helicase, C-terminal AMED_1133 IPR000212 DNA helicase, UvrD/REP type AMED_1133 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1133 IPR034739 UvrD/AddA helicase, N-terminal AMED_1133 IPR014016 UvrD-like helicase, ATP-binding domain AMED_1134 IPR013986 DExx box DNA helicase domain superfamily AMED_1134 IPR014017 UvrD-like DNA helicase, C-terminal AMED_1134 IPR005751 ATP-dependent DNA helicase PcrA AMED_1134 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1134 IPR000212 DNA helicase, UvrD/REP type AMED_1134 IPR034739 UvrD/AddA helicase, N-terminal AMED_1134 IPR014016 UvrD-like helicase, ATP-binding domain AMED_1138 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMED_1141 IPR025646 Domain of unknown function DUF4350 AMED_1142 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1142 IPR041628 ChlI/MoxR, AAA lid domain AMED_1142 IPR011703 ATPase, AAA-3 AMED_1147 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMED_1151 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMED_1151 IPR011765 Peptidase M16, N-terminal AMED_1151 IPR001431 Peptidase M16, zinc-binding site AMED_1151 IPR007863 Peptidase M16, C-terminal AMED_1152 IPR022925 NADH pyrophosphatase NudC AMED_1152 IPR020084 NUDIX hydrolase, conserved site AMED_1152 IPR015375 NADH pyrophosphatase-like, N-terminal AMED_1152 IPR000086 NUDIX hydrolase domain AMED_1152 IPR015376 Zinc ribbon, NADH pyrophosphatase AMED_1152 IPR015797 NUDIX hydrolase-like domain superfamily AMED_1153 IPR036390 Winged helix DNA-binding domain superfamily AMED_1153 IPR000835 MarR-type HTH domain AMED_1153 IPR000600 ROK family AMED_1153 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1155 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1155 IPR035906 MetI-like superfamily AMED_1156 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1156 IPR035906 MetI-like superfamily AMED_1157 IPR019802 Glycoside hydrolase, family 4, conserved site AMED_1157 IPR036291 NAD(P)-binding domain superfamily AMED_1157 IPR001088 Glycoside hydrolase, family 4 AMED_1157 IPR022616 Glycosyl hydrolase, family 4, C-terminal AMED_1157 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AMED_1160 IPR011991 ArsR-like helix-turn-helix domain AMED_1160 IPR001845 HTH ArsR-type DNA-binding domain AMED_1160 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1160 IPR036390 Winged helix DNA-binding domain superfamily AMED_1162 IPR003474 Gluconate transporter AMED_1163 IPR006001 Carbohydrate kinase, thermoresistant glucokinase AMED_1163 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1165 IPR004485 Cobalamin biosynthesis CobD/CbiB AMED_1168 IPR002994 Surfeit locus 1/Shy1 AMED_1169 IPR023485 Phosphotyrosine protein phosphatase I AMED_1169 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMED_1169 IPR017867 Protein-tyrosine phosphatase, low molecular weight AMED_1171 IPR008240 Chorismate mutase, periplasmic AMED_1171 IPR002701 Chorismate mutase II, prokaryotic-type AMED_1171 IPR036263 Chorismate mutase type II superfamily AMED_1172 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMED_1172 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMED_1173 IPR003743 C4-type zinc ribbon domain AMED_1174 IPR002156 Ribonuclease H domain AMED_1174 IPR014636 RNase H, phosphoglycerate mutase domain-containing AMED_1174 IPR012337 Ribonuclease H-like superfamily AMED_1174 IPR029033 Histidine phosphatase superfamily AMED_1174 IPR036397 Ribonuclease H superfamily AMED_1174 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_1177 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1177 IPR000792 Transcription regulator LuxR, C-terminal AMED_1177 IPR001789 Signal transduction response regulator, receiver domain AMED_1177 IPR011006 CheY-like superfamily AMED_1179 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_1179 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1179 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1179 IPR013325 RNA polymerase sigma factor, region 2 AMED_1179 IPR014284 RNA polymerase sigma-70 like domain AMED_1179 IPR039425 RNA polymerase sigma-70 like AMED_1179 IPR007627 RNA polymerase sigma-70 region 2 AMED_1179 IPR007630 RNA polymerase sigma-70 region 4 AMED_1182 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1182 IPR023753 FAD/NAD(P)-binding domain AMED_1182 IPR028202 Reductase, C-terminal AMED_1182 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_1189 IPR038765 Papain-like cysteine peptidase superfamily AMED_1189 IPR000064 Endopeptidase, NLPC/P60 domain AMED_1193 IPR013668 Ribonuclease R winged-helix domain AMED_1193 IPR004476 Ribonuclease II/ribonuclease R AMED_1193 IPR013223 Ribonuclease B, N-terminal OB domain AMED_1193 IPR012340 Nucleic acid-binding, OB-fold AMED_1193 IPR040476 RNase II/RNase R, cold shock domain AMED_1193 IPR011129 Cold shock domain AMED_1193 IPR001900 Ribonuclease II/R AMED_1194 IPR002491 ABC transporter periplasmic binding domain AMED_1194 IPR023544 ABC transporter, vitamin B12-binding protein AMED_1195 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_1195 IPR016161 Aldehyde/histidinol dehydrogenase AMED_1195 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_1195 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_1195 IPR017656 Putative phosphonoacetaldehyde dehydrogenase AMED_1195 IPR015590 Aldehyde dehydrogenase domain AMED_1195 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_1196 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1196 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1196 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1196 IPR005814 Aminotransferase class-III AMED_1196 IPR004632 4-aminobutyrate aminotransferase, bacterial AMED_1200 IPR036390 Winged helix DNA-binding domain superfamily AMED_1200 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1200 IPR000524 Transcription regulator HTH, GntR AMED_1200 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_1200 IPR011711 GntR, C-terminal AMED_1201 IPR016161 Aldehyde/histidinol dehydrogenase AMED_1201 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_1201 IPR017749 1-pyrroline dehydrogenase AMED_1201 IPR015657 Aminobutyraldehyde dehydrogenase AMED_1201 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_1201 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_1201 IPR015590 Aldehyde dehydrogenase domain AMED_1202 IPR013611 Transport-associated OB, type 2 AMED_1202 IPR003593 AAA+ ATPase domain AMED_1202 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1202 IPR017871 ABC transporter, conserved site AMED_1202 IPR008995 Molybdate/tungstate binding, C-terminal AMED_1202 IPR003439 ABC transporter-like AMED_1203 IPR006059 Bacterial extracellular solute-binding protein AMED_1203 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AMED_1204 IPR035906 MetI-like superfamily AMED_1204 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1205 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1205 IPR035906 MetI-like superfamily AMED_1206 IPR002410 Peptidase S33 AMED_1206 IPR029058 Alpha/Beta hydrolase fold AMED_1206 IPR000073 Alpha/beta hydrolase fold-1 AMED_1206 IPR005944 Proline iminopeptidase AMED_1207 IPR003824 Undecaprenyl-diphosphatase UppP AMED_1209 IPR040442 Pyruvate kinase-like domain superfamily AMED_1209 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_1209 IPR003700 Ketopantoate hydroxymethyltransferase AMED_1210 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_1210 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMED_1210 IPR002313 Lysine-tRNA ligase, class II AMED_1210 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMED_1210 IPR012340 Nucleic acid-binding, OB-fold AMED_1210 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_1210 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region AMED_1210 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMED_1212 IPR007061 Protein of unknown function DUF664 AMED_1212 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_1215 IPR014445 Glutamine-dependent NAD(+) synthetase AMED_1215 IPR036526 Carbon-nitrogen hydrolase superfamily AMED_1215 IPR003010 Carbon-nitrogen hydrolase AMED_1215 IPR022310 NAD/GMP synthase AMED_1215 IPR003694 NAD(+) synthetase AMED_1215 IPR000132 Nitrilase/cyanide hydratase, conserved site AMED_1215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1216 IPR036670 SecA, preprotein cross-linking domain superfamily AMED_1216 IPR011130 SecA, preprotein cross-linking domain AMED_1216 IPR011116 SecA Wing/Scaffold AMED_1216 IPR036266 SecA, Wing/Scaffold superfamily AMED_1216 IPR011115 SecA DEAD-like, N-terminal AMED_1216 IPR026389 Protein translocase subunit SecA, Actinobacteria-type AMED_1216 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1216 IPR020937 SecA conserved site AMED_1216 IPR000185 Protein translocase subunit SecA AMED_1216 IPR014018 SecA motor DEAD AMED_1217 IPR029058 Alpha/Beta hydrolase fold AMED_1217 IPR000073 Alpha/beta hydrolase fold-1 AMED_1220 IPR027303 Glutamine synthetase, glycine-rich site AMED_1220 IPR008146 Glutamine synthetase, catalytic domain AMED_1220 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_1220 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMED_1220 IPR008147 Glutamine synthetase, beta-Grasp domain AMED_1220 IPR004809 Glutamine synthetase type I AMED_1221 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMED_1221 IPR023631 Amidase signature domain AMED_1221 IPR020556 Amidase, conserved site AMED_1221 IPR000120 Amidase AMED_1221 IPR036928 Amidase signature (AS) superfamily AMED_1222 IPR000485 AsnC-type HTH domain AMED_1222 IPR011991 ArsR-like helix-turn-helix domain AMED_1222 IPR011008 Dimeric alpha-beta barrel AMED_1222 IPR019888 Transcription regulator AsnC-type AMED_1222 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_1222 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_1222 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1222 IPR036390 Winged helix DNA-binding domain superfamily AMED_1224 IPR022310 NAD/GMP synthase AMED_1224 IPR025777 GMP synthetase ATP pyrophosphatase domain AMED_1224 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1224 IPR022955 GMP synthase AMED_1224 IPR004739 GMP synthase, glutamine amidotransferase AMED_1224 IPR001674 GMP synthase, C-terminal AMED_1224 IPR029062 Class I glutamine amidotransferase-like AMED_1224 IPR017926 Glutamine amidotransferase AMED_1225 IPR001204 Phosphate transporter AMED_1226 IPR001204 Phosphate transporter AMED_1227 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AMED_1227 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AMED_1227 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme AMED_1229 IPR008147 Glutamine synthetase, beta-Grasp domain AMED_1229 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMED_1229 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_1229 IPR008146 Glutamine synthetase, catalytic domain AMED_1229 IPR027303 Glutamine synthetase, glycine-rich site AMED_1229 IPR027302 Glutamine synthetase, N-terminal conserved site AMED_1229 IPR001637 Glutamine synthetase class-I, adenylation site AMED_1229 IPR004809 Glutamine synthetase type I AMED_1232 IPR025445 Protein of unknown function DUF4191 AMED_1233 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1233 IPR002121 HRDC domain AMED_1233 IPR010997 HRDC-like superfamily AMED_1233 IPR014016 UvrD-like helicase, ATP-binding domain AMED_1233 IPR034739 UvrD/AddA helicase, N-terminal AMED_1233 IPR014017 UvrD-like DNA helicase, C-terminal AMED_1233 IPR000212 DNA helicase, UvrD/REP type AMED_1233 IPR013986 DExx box DNA helicase domain superfamily AMED_1235 IPR003482 Transcription factor WhiB AMED_1235 IPR034768 WhiB-like iron-sulfur binding domain AMED_1240 IPR000719 Protein kinase domain AMED_1240 IPR011009 Protein kinase-like domain superfamily AMED_1240 IPR004147 UbiB domain AMED_1244 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_1244 IPR001478 PDZ domain AMED_1244 IPR039381 Endopeptidase La, PDZ domain AMED_1244 IPR008269 Peptidase S16, Lon proteolytic domain AMED_1244 IPR027065 Lon protease AMED_1244 IPR036034 PDZ superfamily AMED_1244 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_1246 IPR005372 Uncharacterised protein family UPF0182 AMED_1247 IPR002938 FAD-binding domain AMED_1247 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1248 IPR001647 DNA-binding HTH domain, TetR-type AMED_1248 IPR009057 Homeobox-like domain superfamily AMED_1248 IPR004111 Tetracycline repressor TetR, C-terminal AMED_1248 IPR003012 Tetracycline transcriptional regulator, TetR AMED_1248 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1248 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_1250 IPR000352 Peptide chain release factor class I AMED_1250 IPR005139 Peptide chain release factor AMED_1250 IPR004374 Peptide chain release factor 2 AMED_1251 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1251 IPR005286 Cell division protein FtsE, ATP-binding AMED_1251 IPR017871 ABC transporter, conserved site AMED_1251 IPR003439 ABC transporter-like AMED_1251 IPR003593 AAA+ ATPase domain AMED_1252 IPR004513 Cell division protein FtsX AMED_1252 IPR003838 ABC transporter permease protein domain AMED_1252 IPR040690 FtsX, extracellular domain AMED_1253 IPR023620 Small protein B AMED_1253 IPR000037 SsrA-binding protein AMED_1253 IPR020081 SsrA-binding protein, conserved site AMED_1258 IPR011006 CheY-like superfamily AMED_1258 IPR001789 Signal transduction response regulator, receiver domain AMED_1258 IPR000792 Transcription regulator LuxR, C-terminal AMED_1258 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1259 IPR003594 Histidine kinase/HSP90-like ATPase AMED_1259 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1259 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_1262 IPR029787 Nucleotide cyclase AMED_1262 IPR000160 GGDEF domain AMED_1262 IPR033416 Periplasmic sensor domain CHASE7 AMED_1265 IPR005921 Histidine ammonia-lyase AMED_1265 IPR024083 Fumarase/histidase, N-terminal AMED_1265 IPR008948 L-Aspartase-like AMED_1265 IPR001106 Aromatic amino acid lyase AMED_1265 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AMED_1266 IPR023637 Urocanase AMED_1266 IPR035401 Urocanase, C-terminal domain AMED_1266 IPR038364 Urocanase, central domain superfamily AMED_1266 IPR023636 Urocanase conserved site AMED_1266 IPR035085 Urocanase, Rossmann-like domain AMED_1266 IPR035400 Urocanase, N-terminal domain AMED_1266 IPR036190 Urocanase superfamily AMED_1267 IPR002933 Peptidase M20 AMED_1267 IPR010158 Amidase, carbamoylase-type AMED_1267 IPR011650 Peptidase M20, dimerisation domain AMED_1267 IPR036264 Bacterial exopeptidase dimerisation domain AMED_1268 IPR006680 Amidohydrolase-related AMED_1268 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_1268 IPR032466 Metal-dependent hydrolase AMED_1268 IPR023512 Deaminase MtaD/DadD AMED_1269 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_1269 IPR032466 Metal-dependent hydrolase AMED_1269 IPR006680 Amidohydrolase-related AMED_1269 IPR005920 Imidazolonepropionase AMED_1270 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1270 IPR002938 FAD-binding domain AMED_1273 IPR001204 Phosphate transporter AMED_1277 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1277 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_1278 IPR000792 Transcription regulator LuxR, C-terminal AMED_1278 IPR011006 CheY-like superfamily AMED_1278 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1278 IPR001789 Signal transduction response regulator, receiver domain AMED_1279 IPR002938 FAD-binding domain AMED_1279 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1283 IPR003593 AAA+ ATPase domain AMED_1283 IPR003439 ABC transporter-like AMED_1283 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1283 IPR017871 ABC transporter, conserved site AMED_1284 IPR007502 Helicase-associated domain AMED_1284 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1284 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_1284 IPR001650 Helicase, C-terminal AMED_1284 IPR011545 DEAD/DEAH box helicase domain AMED_1284 IPR010225 ATP-dependent helicase HrpB AMED_1284 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMED_1285 IPR018313 Solute-binding protein family 3, conserved site AMED_1285 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_1287 IPR036249 Thioredoxin-like superfamily AMED_1287 IPR000719 Protein kinase domain AMED_1287 IPR017441 Protein kinase, ATP binding site AMED_1287 IPR012336 Thioredoxin-like fold AMED_1287 IPR011009 Protein kinase-like domain superfamily AMED_1289 IPR000064 Endopeptidase, NLPC/P60 domain AMED_1289 IPR038765 Papain-like cysteine peptidase superfamily AMED_1292 IPR012733 4-hydroxybenzoate 3-monooxygenase AMED_1292 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1292 IPR002938 FAD-binding domain AMED_1294 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_1294 IPR007061 Protein of unknown function DUF664 AMED_1295 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_1295 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_1295 IPR017853 Glycoside hydrolase superfamily AMED_1295 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_1295 IPR026891 Fibronectin type III-like domain AMED_1295 IPR013783 Immunoglobulin-like fold AMED_1295 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_1297 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AMED_1297 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AMED_1297 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AMED_1297 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMED_1297 IPR005743 DNA gyrase, subunit A AMED_1297 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AMED_1297 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMED_1298 IPR001241 DNA topoisomerase, type IIA AMED_1298 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_1298 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1298 IPR003594 Histidine kinase/HSP90-like ATPase AMED_1298 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMED_1298 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AMED_1298 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AMED_1298 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_1298 IPR006171 TOPRIM domain AMED_1298 IPR018522 DNA topoisomerase, type IIA, conserved site AMED_1298 IPR002288 DNA gyrase B subunit, C-terminal AMED_1298 IPR011557 DNA gyrase, subunit B AMED_1301 IPR019912 FMN reductase, MsuE-like AMED_1301 IPR005025 NADPH-dependent FMN reductase-like AMED_1301 IPR029039 Flavoprotein-like superfamily AMED_1307 IPR001851 ABC transporter, permease AMED_1308 IPR001851 ABC transporter, permease AMED_1309 IPR003593 AAA+ ATPase domain AMED_1309 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1309 IPR015861 ABC transporter, ribose import, RbsA AMED_1309 IPR017871 ABC transporter, conserved site AMED_1309 IPR003439 ABC transporter-like AMED_1310 IPR025997 Periplasmic binding protein AMED_1310 IPR028082 Periplasmic binding protein-like I AMED_1310 IPR033893 ABC transporter periplasmic-binding protein YtfQ AMED_1311 IPR023588 Transcription regulator HTH, PurR AMED_1311 IPR028082 Periplasmic binding protein-like I AMED_1311 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_1311 IPR000843 LacI-type HTH domain AMED_1312 IPR042174 DNA-binding RecF, domain 2 AMED_1312 IPR003395 RecF/RecN/SMC, N-terminal AMED_1312 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1312 IPR018078 DNA-binding, RecF, conserved site AMED_1312 IPR001238 DNA-binding, RecF AMED_1313 IPR036390 Winged helix DNA-binding domain superfamily AMED_1313 IPR002577 Helix-turn-helix, HxlR type AMED_1313 IPR011991 ArsR-like helix-turn-helix domain AMED_1313 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1314 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1314 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1314 IPR036291 NAD(P)-binding domain superfamily AMED_1315 IPR001647 DNA-binding HTH domain, TetR-type AMED_1315 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1315 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) AMED_1315 IPR009057 Homeobox-like domain superfamily AMED_1318 IPR041552 UvrA DNA-binding domain AMED_1318 IPR004602 UvrABC system subunit A AMED_1318 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1318 IPR017871 ABC transporter, conserved site AMED_1318 IPR003439 ABC transporter-like AMED_1318 IPR003593 AAA+ ATPase domain AMED_1318 IPR041102 UvrA, interaction domain AMED_1324 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_1324 IPR001279 Metallo-beta-lactamase AMED_1324 IPR022877 Protein of unknown funcion UPF0173 AMED_1325 IPR008949 Isoprenoid synthase domain superfamily AMED_1325 IPR034686 Terpene cyclase-like 2 AMED_1327 IPR004236 Peptidase S1A, alpha-lytic prodomain AMED_1327 IPR001316 Peptidase S1A, streptogrisin AMED_1327 IPR009003 Peptidase S1, PA clan AMED_1327 IPR001254 Serine proteases, trypsin domain AMED_1327 IPR018114 Serine proteases, trypsin family, histidine active site AMED_1327 IPR033116 Serine proteases, trypsin family, serine active site AMED_1328 IPR014431 Tellurite resistance methyltransferase, TehB type-2 AMED_1328 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1328 IPR004537 Tellurite resistance methyltransferase, TehB AMED_1328 IPR014710 RmlC-like jelly roll fold AMED_1328 IPR015985 Tellurite resistance methyltransferase TehB-like domain AMED_1330 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_1330 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1330 IPR036291 NAD(P)-binding domain superfamily AMED_1330 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1331 IPR002397 Cytochrome P450, B-class AMED_1331 IPR017972 Cytochrome P450, conserved site AMED_1331 IPR036396 Cytochrome P450 superfamily AMED_1331 IPR001128 Cytochrome P450 AMED_1332 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_1332 IPR004523 Aspartate-tRNA synthetase, type 2 AMED_1332 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AMED_1332 IPR012340 Nucleic acid-binding, OB-fold AMED_1332 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMED_1332 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_1334 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1334 IPR036291 NAD(P)-binding domain superfamily AMED_1334 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1336 IPR029058 Alpha/Beta hydrolase fold AMED_1336 IPR023489 Haloalkane dehalogenase, subfamily 1 AMED_1336 IPR000073 Alpha/beta hydrolase fold-1 AMED_1336 IPR000639 Epoxide hydrolase-like AMED_1337 IPR012938 Glucose/Sorbosone dehydrogenase AMED_1337 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AMED_1337 IPR011042 Six-bladed beta-propeller, TolB-like AMED_1337 IPR019893 PQQ-dependent dehydrogenase, s-GDH family AMED_1339 IPR002765 Uncharacterised protein family UPF0145 AMED_1339 IPR035439 UPF0145 domain superfamily AMED_1340 IPR035439 UPF0145 domain superfamily AMED_1340 IPR002765 Uncharacterised protein family UPF0145 AMED_1341 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_1341 IPR002139 Ribokinase/fructokinase AMED_1341 IPR011611 Carbohydrate kinase PfkB AMED_1341 IPR030877 Sulfofructose kinase AMED_1341 IPR029056 Ribokinase-like AMED_1342 IPR036291 NAD(P)-binding domain superfamily AMED_1342 IPR001088 Glycoside hydrolase, family 4 AMED_1342 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AMED_1342 IPR022616 Glycosyl hydrolase, family 4, C-terminal AMED_1342 IPR019802 Glycoside hydrolase, family 4, conserved site AMED_1344 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1344 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_1344 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_1345 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG AMED_1345 IPR036661 Luciferase-like domain superfamily AMED_1345 IPR011251 Luciferase-like domain AMED_1346 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AMED_1346 IPR036291 NAD(P)-binding domain superfamily AMED_1346 IPR014362 Glutamate dehydrogenase AMED_1346 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AMED_1346 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AMED_1346 IPR033524 Leu/Phe/Val dehydrogenases active site AMED_1346 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AMED_1348 IPR000639 Epoxide hydrolase-like AMED_1348 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_1348 IPR010497 Epoxide hydrolase, N-terminal AMED_1348 IPR029058 Alpha/Beta hydrolase fold AMED_1348 IPR016292 Epoxide hydrolase AMED_1354 IPR011005 Dihydropteroate synthase-like AMED_1354 IPR000489 Pterin-binding domain AMED_1354 IPR006390 Dihydropteroate synthase AMED_1356 IPR003439 ABC transporter-like AMED_1356 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1356 IPR017871 ABC transporter, conserved site AMED_1356 IPR003593 AAA+ ATPase domain AMED_1364 IPR035992 Ricin B-like lectins AMED_1364 IPR037176 Osmotin/thaumatin-like superfamily AMED_1364 IPR032477 Beta-1,3-glucanase, N-terminal AMED_1364 IPR037398 Glucan endo-1,3-beta-glucosidase AMED_1364 IPR000772 Ricin B, lectin domain AMED_1364 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_1365 IPR004779 Carboxylate/Amino Acid/Amine Transporter AMED_1365 IPR000620 EamA domain AMED_1366 IPR023187 Transcriptional regulator MarR-type, conserved site AMED_1366 IPR036390 Winged helix DNA-binding domain superfamily AMED_1366 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1366 IPR000835 MarR-type HTH domain AMED_1368 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup AMED_1368 IPR004720 Phosphotransferase system, sorbose subfamily IIB component AMED_1368 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily AMED_1369 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component AMED_1370 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily AMED_1370 IPR004701 Phosphotransferase system, mannose-type IIA component AMED_1370 IPR033887 PTS system mannose/sorbose specific IIA subunit AMED_1370 IPR013789 Phosphotransferase system, mannose family IIA component AMED_1373 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1373 IPR019734 Tetratricopeptide repeat AMED_1373 IPR005158 Bacterial transcriptional activator domain AMED_1373 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_1373 IPR013026 Tetratricopeptide repeat-containing domain AMED_1373 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1373 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1373 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1373 IPR002182 NB-ARC AMED_1375 IPR036259 MFS transporter superfamily AMED_1375 IPR020846 Major facilitator superfamily domain AMED_1375 IPR011701 Major facilitator superfamily AMED_1376 IPR015168 SsuA/THI5-like AMED_1376 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_1376 IPR010067 Aliphatic sulfonates-binding protein AMED_1377 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1377 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMED_1377 IPR017871 ABC transporter, conserved site AMED_1377 IPR003439 ABC transporter-like AMED_1377 IPR003593 AAA+ ATPase domain AMED_1378 IPR003593 AAA+ ATPase domain AMED_1378 IPR003439 ABC transporter-like AMED_1378 IPR017871 ABC transporter, conserved site AMED_1378 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMED_1378 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1382 IPR001647 DNA-binding HTH domain, TetR-type AMED_1382 IPR009057 Homeobox-like domain superfamily AMED_1382 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_1386 IPR011006 CheY-like superfamily AMED_1386 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1386 IPR000792 Transcription regulator LuxR, C-terminal AMED_1386 IPR001789 Signal transduction response regulator, receiver domain AMED_1386 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1388 IPR017871 ABC transporter, conserved site AMED_1388 IPR003593 AAA+ ATPase domain AMED_1388 IPR003439 ABC transporter-like AMED_1388 IPR015854 ABC transporter, lipoprotein release, LolD AMED_1388 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1391 IPR001137 Glycoside hydrolase family 11 AMED_1391 IPR001919 Carbohydrate-binding type-2 domain AMED_1391 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_1391 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_1391 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_1391 IPR013319 Glycoside hydrolase family 11/12 AMED_1391 IPR018208 Glycoside hydrolase family 11, active site 1 AMED_1391 IPR033119 Glycoside hydrolase family 11, active site 2 AMED_1391 IPR033123 Glycosyl hydrolases family 11 (GH11) domain AMED_1392 IPR002509 NodB homology domain AMED_1392 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_1392 IPR033119 Glycoside hydrolase family 11, active site 2 AMED_1392 IPR001137 Glycoside hydrolase family 11 AMED_1392 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMED_1392 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_1392 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_1392 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_1392 IPR033123 Glycosyl hydrolases family 11 (GH11) domain AMED_1392 IPR001919 Carbohydrate-binding type-2 domain AMED_1392 IPR018208 Glycoside hydrolase family 11, active site 1 AMED_1392 IPR013319 Glycoside hydrolase family 11/12 AMED_1393 IPR003593 AAA+ ATPase domain AMED_1393 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1393 IPR017871 ABC transporter, conserved site AMED_1393 IPR003439 ABC transporter-like AMED_1400 IPR004638 Drug resistance transporter EmrB-like AMED_1400 IPR011701 Major facilitator superfamily AMED_1400 IPR020846 Major facilitator superfamily domain AMED_1400 IPR036259 MFS transporter superfamily AMED_1400 IPR005829 Sugar transporter, conserved site AMED_1401 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_1401 IPR016161 Aldehyde/histidinol dehydrogenase AMED_1401 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_1401 IPR015590 Aldehyde dehydrogenase domain AMED_1401 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_1403 IPR008928 Six-hairpin glycosidase superfamily AMED_1403 IPR012341 Six-hairpin glycosidase-like superfamily AMED_1403 IPR011613 GH15-like domain AMED_1404 IPR013149 Alcohol dehydrogenase, C-terminal AMED_1404 IPR013154 Alcohol dehydrogenase, N-terminal AMED_1404 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_1404 IPR011032 GroES-like superfamily AMED_1404 IPR036291 NAD(P)-binding domain superfamily AMED_1404 IPR004627 L-threonine 3-dehydrogenase AMED_1408 IPR036661 Luciferase-like domain superfamily AMED_1408 IPR011251 Luciferase-like domain AMED_1408 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent AMED_1411 IPR005490 L,D-transpeptidase catalytic domain AMED_1411 IPR038063 L,D-transpeptidase catalytic domain-like AMED_1411 IPR041280 Bacterial Ig domain, transpeptidase-associated AMED_1412 IPR036259 MFS transporter superfamily AMED_1412 IPR011701 Major facilitator superfamily AMED_1412 IPR020846 Major facilitator superfamily domain AMED_1412 IPR004751 Drug antiporter protein AMED_1413 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMED_1413 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMED_1413 IPR042097 Aminopeptidase N-like , N-terminal AMED_1413 IPR034016 Aminopeptidase N-type AMED_1413 IPR024571 ERAP1-like C-terminal domain AMED_1418 IPR022385 Rhs repeat-associated core AMED_1418 IPR001826 RHS protein AMED_1418 IPR006530 YD repeat AMED_1418 IPR031325 RHS repeat AMED_1425 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_1425 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_1425 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_1425 IPR020807 Polyketide synthase, dehydratase domain AMED_1425 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_1425 IPR036291 NAD(P)-binding domain superfamily AMED_1425 IPR016039 Thiolase-like AMED_1425 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_1425 IPR020843 Polyketide synthase, enoylreductase domain AMED_1425 IPR013968 Polyketide synthase, ketoreductase domain AMED_1425 IPR009081 Phosphopantetheine binding ACP domain AMED_1425 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_1425 IPR018201 Beta-ketoacyl synthase, active site AMED_1425 IPR011032 GroES-like superfamily AMED_1425 IPR014043 Acyl transferase AMED_1425 IPR036736 ACP-like superfamily AMED_1425 IPR013154 Alcohol dehydrogenase, N-terminal AMED_1425 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_1425 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_1425 IPR013149 Alcohol dehydrogenase, C-terminal AMED_1425 IPR001227 Acyl transferase domain superfamily AMED_1427 IPR020843 Polyketide synthase, enoylreductase domain AMED_1427 IPR013154 Alcohol dehydrogenase, N-terminal AMED_1427 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_1427 IPR011032 GroES-like superfamily AMED_1427 IPR036291 NAD(P)-binding domain superfamily AMED_1427 IPR013149 Alcohol dehydrogenase, C-terminal AMED_1431 IPR004942 Roadblock/LAMTOR2 domain AMED_1434 IPR001128 Cytochrome P450 AMED_1434 IPR036396 Cytochrome P450 superfamily AMED_1434 IPR002397 Cytochrome P450, B-class AMED_1434 IPR017972 Cytochrome P450, conserved site AMED_1436 IPR036291 NAD(P)-binding domain superfamily AMED_1436 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1436 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1437 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1437 IPR005119 LysR, substrate-binding AMED_1437 IPR036390 Winged helix DNA-binding domain superfamily AMED_1437 IPR000847 Transcription regulator HTH, LysR AMED_1438 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1438 IPR036291 NAD(P)-binding domain superfamily AMED_1440 IPR002938 FAD-binding domain AMED_1440 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1441 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_1441 IPR001647 DNA-binding HTH domain, TetR-type AMED_1441 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1441 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_1441 IPR009057 Homeobox-like domain superfamily AMED_1447 IPR023210 NADP-dependent oxidoreductase domain AMED_1447 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_1449 IPR014284 RNA polymerase sigma-70 like domain AMED_1449 IPR014325 RNA polymerase sigma-E factor, actinobacteria AMED_1449 IPR007627 RNA polymerase sigma-70 region 2 AMED_1449 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1449 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_1449 IPR013325 RNA polymerase sigma factor, region 2 AMED_1449 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1449 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_1454 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1454 IPR019734 Tetratricopeptide repeat AMED_1454 IPR013026 Tetratricopeptide repeat-containing domain AMED_1454 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1454 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1454 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1454 IPR002182 NB-ARC AMED_1454 IPR005158 Bacterial transcriptional activator domain AMED_1454 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_1456 IPR004294 Carotenoid oxygenase AMED_1459 IPR020843 Polyketide synthase, enoylreductase domain AMED_1459 IPR010085 Crotonyl-CoA reductase AMED_1459 IPR013154 Alcohol dehydrogenase, N-terminal AMED_1459 IPR013149 Alcohol dehydrogenase, C-terminal AMED_1459 IPR011032 GroES-like superfamily AMED_1459 IPR036291 NAD(P)-binding domain superfamily AMED_1462 IPR013785 Aldolase-type TIM barrel AMED_1462 IPR000891 Pyruvate carboxyltransferase AMED_1463 IPR025110 AMP-binding enzyme, C-terminal domain AMED_1463 IPR000873 AMP-dependent synthetase/ligase AMED_1463 IPR020845 AMP-binding, conserved site AMED_1464 IPR008979 Galactose-binding-like domain superfamily AMED_1464 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_1464 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_1464 IPR029058 Alpha/Beta hydrolase fold AMED_1464 IPR005674 CocE/Serine esterase AMED_1466 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1466 IPR011006 CheY-like superfamily AMED_1466 IPR000792 Transcription regulator LuxR, C-terminal AMED_1466 IPR001789 Signal transduction response regulator, receiver domain AMED_1469 IPR012334 Pectin lyase fold AMED_1471 IPR013471 Ribonuclease Z/BN AMED_1471 IPR001279 Metallo-beta-lactamase AMED_1471 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_1472 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMED_1472 IPR005982 Thioredoxin reductase AMED_1472 IPR023753 FAD/NAD(P)-binding domain AMED_1472 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1473 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_1473 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_1473 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_1473 IPR013767 PAS fold AMED_1473 IPR035965 PAS domain superfamily AMED_1473 IPR003594 Histidine kinase/HSP90-like ATPase AMED_1473 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1473 IPR005467 Histidine kinase domain AMED_1473 IPR000014 PAS domain AMED_1474 IPR029058 Alpha/Beta hydrolase fold AMED_1474 IPR019826 Carboxylesterase type B, active site AMED_1474 IPR002018 Carboxylesterase, type B AMED_1474 IPR019819 Carboxylesterase type B, conserved site AMED_1474 IPR000997 Cholinesterase AMED_1481 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMED_1481 IPR023401 Ornithine cyclodeaminase, N-terminal AMED_1481 IPR036291 NAD(P)-binding domain superfamily AMED_1482 IPR003346 Transposase, IS116/IS110/IS902 AMED_1482 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal AMED_1484 IPR000572 Oxidoreductase, molybdopterin-binding domain AMED_1484 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily AMED_1485 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_1485 IPR017938 Riboflavin synthase-like beta-barrel AMED_1485 IPR012675 Beta-grasp domain superfamily AMED_1485 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_1485 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_1485 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_1485 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_1485 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_1485 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_1485 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_1490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1490 IPR022812 Dynamin superfamily AMED_1491 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1491 IPR022812 Dynamin superfamily AMED_1493 IPR036390 Winged helix DNA-binding domain superfamily AMED_1493 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1493 IPR002577 Helix-turn-helix, HxlR type AMED_1494 IPR020845 AMP-binding, conserved site AMED_1494 IPR000873 AMP-dependent synthetase/ligase AMED_1494 IPR042099 AMP-dependent synthetase-like superfamily AMED_1494 IPR025110 AMP-binding enzyme, C-terminal domain AMED_1497 IPR012349 FMN-binding split barrel AMED_1497 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_1497 IPR019920 F420-binding domain, putative AMED_1498 IPR002037 Glycoside hydrolase, family 8 AMED_1498 IPR019834 Glycoside hydrolase, family 8, conserved site AMED_1498 IPR012341 Six-hairpin glycosidase-like superfamily AMED_1498 IPR008928 Six-hairpin glycosidase superfamily AMED_1499 IPR000683 Oxidoreductase, N-terminal AMED_1499 IPR036291 NAD(P)-binding domain superfamily AMED_1499 IPR004104 Oxidoreductase, C-terminal AMED_1500 IPR018313 Solute-binding protein family 3, conserved site AMED_1500 IPR001320 Ionotropic glutamate receptor AMED_1500 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_1501 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1501 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMED_1501 IPR035906 MetI-like superfamily AMED_1502 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMED_1502 IPR003593 AAA+ ATPase domain AMED_1502 IPR017871 ABC transporter, conserved site AMED_1502 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1502 IPR003439 ABC transporter-like AMED_1503 IPR013559 YheO-like AMED_1503 IPR039445 Transcriptional regulator DauR-like, HTH domain AMED_1503 IPR039446 Transcriptional regulator DauR-like AMED_1505 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase AMED_1505 IPR035595 UDP-glycosyltransferase family, conserved site AMED_1505 IPR006326 UDP-glycosyltransferase, MGT AMED_1506 IPR029058 Alpha/Beta hydrolase fold AMED_1506 IPR000073 Alpha/beta hydrolase fold-1 AMED_1507 IPR003593 AAA+ ATPase domain AMED_1507 IPR017871 ABC transporter, conserved site AMED_1507 IPR003439 ABC transporter-like AMED_1507 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1511 IPR001126 UmuC domain AMED_1511 IPR024728 DNA polymerase type-Y, HhH motif AMED_1511 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMED_1511 IPR022880 DNA polymerase IV AMED_1511 IPR017961 DNA polymerase, Y-family, little finger domain AMED_1513 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_1513 IPR000524 Transcription regulator HTH, GntR AMED_1513 IPR011711 GntR, C-terminal AMED_1513 IPR036390 Winged helix DNA-binding domain superfamily AMED_1513 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1514 IPR001851 ABC transporter, permease AMED_1515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1515 IPR015861 ABC transporter, ribose import, RbsA AMED_1515 IPR017871 ABC transporter, conserved site AMED_1515 IPR003439 ABC transporter-like AMED_1515 IPR003593 AAA+ ATPase domain AMED_1516 IPR025997 Periplasmic binding protein AMED_1516 IPR028082 Periplasmic binding protein-like I AMED_1518 IPR008949 Isoprenoid synthase domain superfamily AMED_1518 IPR033749 Polyprenyl synthetase, conserved site AMED_1518 IPR000092 Polyprenyl synthetase AMED_1523 IPR025997 Periplasmic binding protein AMED_1523 IPR028082 Periplasmic binding protein-like I AMED_1525 IPR010905 Glycosyl hydrolase, family 88 AMED_1525 IPR012341 Six-hairpin glycosidase-like superfamily AMED_1525 IPR008928 Six-hairpin glycosidase superfamily AMED_1527 IPR013026 Tetratricopeptide repeat-containing domain AMED_1527 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1527 IPR019734 Tetratricopeptide repeat AMED_1527 IPR002182 NB-ARC AMED_1527 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1527 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1527 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1527 IPR005158 Bacterial transcriptional activator domain AMED_1527 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_1529 IPR018946 Alkaline phosphatase D-related AMED_1529 IPR038607 PhoD-like superfamily AMED_1529 IPR032093 Phospholipase D, N-terminal AMED_1529 IPR008963 Purple acid phosphatase-like, N-terminal AMED_1530 IPR024535 Pectate lyase superfamily protein AMED_1530 IPR012334 Pectin lyase fold AMED_1530 IPR018511 Hemolysin-type calcium-binding conserved site AMED_1530 IPR011049 Serralysin-like metalloprotease, C-terminal AMED_1530 IPR006626 Parallel beta-helix repeat AMED_1530 IPR001343 RTX calcium-binding nonapeptide repeat AMED_1530 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMED_1530 IPR011050 Pectin lyase fold/virulence factor AMED_1530 IPR039448 Right handed beta helix domain AMED_1531 IPR010905 Glycosyl hydrolase, family 88 AMED_1531 IPR008928 Six-hairpin glycosidase superfamily AMED_1531 IPR012341 Six-hairpin glycosidase-like superfamily AMED_1533 IPR008928 Six-hairpin glycosidase superfamily AMED_1533 IPR012341 Six-hairpin glycosidase-like superfamily AMED_1533 IPR004888 Glycoside hydrolase family 63 AMED_1534 IPR004654 Glucokinase ROK AMED_1534 IPR000600 ROK family AMED_1536 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_1536 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1536 IPR003594 Histidine kinase/HSP90-like ATPase AMED_1536 IPR033480 Single Cache domain 2 AMED_1536 IPR017171 Signal transduction histidine kinase, MctS AMED_1538 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1538 IPR036291 NAD(P)-binding domain superfamily AMED_1538 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1539 IPR042118 QueA, domain 1 AMED_1539 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AMED_1539 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily AMED_1539 IPR042119 QueA, domain 2 AMED_1542 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1542 IPR003593 AAA+ ATPase domain AMED_1542 IPR015859 ABC transporter, taurine import, TauD AMED_1542 IPR017871 ABC transporter, conserved site AMED_1542 IPR003439 ABC transporter-like AMED_1543 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1543 IPR035906 MetI-like superfamily AMED_1546 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_1546 IPR001650 Helicase, C-terminal AMED_1546 IPR028622 ATP-dependent RNA helicase RhlE AMED_1546 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1546 IPR014014 RNA helicase, DEAD-box type, Q motif AMED_1546 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMED_1546 IPR011545 DEAD/DEAH box helicase domain AMED_1551 IPR037027 YqgF/RNase H-like domain superfamily AMED_1551 IPR012337 Ribonuclease H-like superfamily AMED_1551 IPR041692 HHH domain 9 AMED_1551 IPR012340 Nucleic acid-binding, OB-fold AMED_1551 IPR006641 YqgF/RNase H-like domain AMED_1551 IPR032639 Tex protein, YqgF-like domain AMED_1551 IPR010994 RuvA domain 2-like AMED_1551 IPR018974 Tex-like protein, N-terminal AMED_1551 IPR022967 RNA-binding domain, S1 AMED_1551 IPR023319 Tex-like protein, HTH domain superfamily AMED_1551 IPR003029 S1 domain AMED_1551 IPR023323 Tex-like domain superfamily AMED_1552 IPR003305 Carbohydrate-binding, CenC-like AMED_1552 IPR017853 Glycoside hydrolase superfamily AMED_1552 IPR001579 Glycoside hydrolase, chitinase active site AMED_1552 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_1552 IPR013783 Immunoglobulin-like fold AMED_1552 IPR008979 Galactose-binding-like domain superfamily AMED_1552 IPR036116 Fibronectin type III superfamily AMED_1552 IPR003961 Fibronectin type III AMED_1552 IPR011583 Chitinase II AMED_1553 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_1553 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1554 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1554 IPR020946 Flavin monooxygenase-like AMED_1556 IPR018060 DNA binding HTH domain, AraC-type AMED_1556 IPR020449 Transcription regulator HTH, AraC- type AMED_1556 IPR009057 Homeobox-like domain superfamily AMED_1556 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMED_1560 IPR041646 IcaR, C-terminal AMED_1560 IPR001647 DNA-binding HTH domain, TetR-type AMED_1560 IPR009057 Homeobox-like domain superfamily AMED_1561 IPR042099 AMP-dependent synthetase-like superfamily AMED_1561 IPR028154 AMP-dependent ligase, C-terminal AMED_1561 IPR000873 AMP-dependent synthetase/ligase AMED_1561 IPR011880 Phenylacetate-CoA ligase AMED_1563 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_1563 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_1563 IPR015590 Aldehyde dehydrogenase domain AMED_1563 IPR029069 HotDog domain superfamily AMED_1563 IPR002539 MaoC-like dehydratase domain AMED_1563 IPR016161 Aldehyde/histidinol dehydrogenase AMED_1563 IPR011966 Phenylacetic acid degradation protein PaaN AMED_1564 IPR012347 Ferritin-like AMED_1564 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C AMED_1564 IPR009078 Ferritin-like superfamily AMED_1564 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A AMED_1565 IPR009359 Phenylacetic acid degradation B AMED_1565 IPR038693 Phenylacetyl-CoA epoxidase, subunit B AMED_1566 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C AMED_1566 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C AMED_1566 IPR009078 Ferritin-like superfamily AMED_1566 IPR012347 Ferritin-like AMED_1567 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AMED_1567 IPR034904 Fe-S cluster assembly domain superfamily AMED_1567 IPR002744 MIP18 family-like AMED_1568 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_1568 IPR017938 Riboflavin synthase-like beta-barrel AMED_1568 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_1568 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_1568 IPR012675 Beta-grasp domain superfamily AMED_1568 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_1568 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_1568 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_1568 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit AMED_1568 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_1568 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_1571 IPR032026 Adenylate cyclase regulatory domain AMED_1571 IPR029787 Nucleotide cyclase AMED_1571 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMED_1572 IPR006015 Universal stress protein A family AMED_1572 IPR006016 UspA AMED_1572 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1574 IPR013154 Alcohol dehydrogenase, N-terminal AMED_1574 IPR011032 GroES-like superfamily AMED_1574 IPR010085 Crotonyl-CoA reductase AMED_1574 IPR013149 Alcohol dehydrogenase, C-terminal AMED_1574 IPR036291 NAD(P)-binding domain superfamily AMED_1574 IPR020843 Polyketide synthase, enoylreductase domain AMED_1577 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_1577 IPR017515 Methylmalonyl-CoA epimerase AMED_1577 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_1578 IPR020617 Thiolase, C-terminal AMED_1578 IPR020616 Thiolase, N-terminal AMED_1578 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_1578 IPR020610 Thiolase, active site AMED_1578 IPR016039 Thiolase-like AMED_1578 IPR002155 Thiolase AMED_1578 IPR020613 Thiolase, conserved site AMED_1579 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1579 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB AMED_1580 IPR029000 Cyclophilin-like domain superfamily AMED_1580 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMED_1581 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1581 IPR004839 Aminotransferase, class I/classII AMED_1581 IPR000524 Transcription regulator HTH, GntR AMED_1581 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1581 IPR036390 Winged helix DNA-binding domain superfamily AMED_1581 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1582 IPR029032 AhpD-like AMED_1582 IPR003779 Carboxymuconolactone decarboxylase-like AMED_1582 IPR004675 Alkylhydroperoxidase AhpD core AMED_1583 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AMED_1583 IPR012695 2-methylisocitrate lyase AMED_1583 IPR039556 ICL/PEPM domain AMED_1583 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_1583 IPR040442 Pyruvate kinase-like domain superfamily AMED_1584 IPR001734 Sodium/solute symporter AMED_1584 IPR038377 Sodium/glucose symporter superfamily AMED_1586 IPR038377 Sodium/glucose symporter superfamily AMED_1586 IPR001734 Sodium/solute symporter AMED_1586 IPR018212 Sodium/solute symporter, conserved site AMED_1588 IPR007492 LytTR DNA-binding domain AMED_1588 IPR001789 Signal transduction response regulator, receiver domain AMED_1588 IPR011006 CheY-like superfamily AMED_1589 IPR010559 Signal transduction histidine kinase, internal region AMED_1589 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1589 IPR003018 GAF domain AMED_1589 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AMED_1591 IPR028082 Periplasmic binding protein-like I AMED_1591 IPR025997 Periplasmic binding protein AMED_1592 IPR001851 ABC transporter, permease AMED_1593 IPR003439 ABC transporter-like AMED_1593 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1593 IPR003593 AAA+ ATPase domain AMED_1595 IPR028082 Periplasmic binding protein-like I AMED_1595 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_1595 IPR006377 Catabolite control protein A AMED_1595 IPR000843 LacI-type HTH domain AMED_1596 IPR005887 Alpha-1,2-mannosidase, putative AMED_1596 IPR008928 Six-hairpin glycosidase superfamily AMED_1596 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_1596 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_1596 IPR012939 Glycosyl hydrolase family 92 AMED_1597 IPR012939 Glycosyl hydrolase family 92 AMED_1597 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_1597 IPR005887 Alpha-1,2-mannosidase, putative AMED_1597 IPR008928 Six-hairpin glycosidase superfamily AMED_1597 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_1599 IPR036390 Winged helix DNA-binding domain superfamily AMED_1599 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1599 IPR000835 MarR-type HTH domain AMED_1600 IPR029756 MTH1187/YkoF-like AMED_1600 IPR002767 Thiamine-binding protein AMED_1602 IPR013766 Thioredoxin domain AMED_1602 IPR036249 Thioredoxin-like superfamily AMED_1602 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_1604 IPR000811 Glycosyl transferase, family 35 AMED_1604 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 AMED_1604 IPR035090 Phosphorylase pyridoxal-phosphate attachment site AMED_1604 IPR011834 Alpha-glucan phosphorylase AMED_1609 IPR019914 Pyrimidine monooxygenase RutA AMED_1609 IPR036661 Luciferase-like domain superfamily AMED_1609 IPR011251 Luciferase-like domain AMED_1613 IPR017871 ABC transporter, conserved site AMED_1613 IPR003439 ABC transporter-like AMED_1613 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1613 IPR003593 AAA+ ATPase domain AMED_1614 IPR029045 ClpP/crotonase-like domain superfamily AMED_1614 IPR001753 Enoyl-CoA hydratase/isomerase AMED_1615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1615 IPR004033 UbiE/COQ5 methyltransferase AMED_1615 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_1616 IPR041497 THUMP-like domain AMED_1616 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1618 IPR000847 Transcription regulator HTH, LysR AMED_1618 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1618 IPR036390 Winged helix DNA-binding domain superfamily AMED_1618 IPR005119 LysR, substrate-binding AMED_1619 IPR003610 Carbohydrate-binding module family 5/12 AMED_1619 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_1619 IPR017853 Glycoside hydrolase superfamily AMED_1621 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1621 IPR004839 Aminotransferase, class I/classII AMED_1621 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1621 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1621 IPR000524 Transcription regulator HTH, GntR AMED_1621 IPR036390 Winged helix DNA-binding domain superfamily AMED_1623 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1623 IPR002938 FAD-binding domain AMED_1628 IPR023210 NADP-dependent oxidoreductase domain AMED_1628 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_1629 IPR002938 FAD-binding domain AMED_1629 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1630 IPR038765 Papain-like cysteine peptidase superfamily AMED_1630 IPR000064 Endopeptidase, NLPC/P60 domain AMED_1631 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA AMED_1631 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AMED_1631 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMED_1631 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site AMED_1631 IPR036452 Ribonucleoside hydrolase-like AMED_1632 IPR001451 Hexapeptide repeat AMED_1632 IPR011004 Trimeric LpxA-like superfamily AMED_1634 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_1634 IPR001721 Threonine dehydratase, ACT-like domain AMED_1634 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_1634 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_1634 IPR011820 L-threonine dehydratase biosynthetic IlvA AMED_1634 IPR038110 Threonine dehydratase, ACT-like domain superfamily AMED_1637 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMED_1637 IPR026281 HTH-type transcriptional regulator RamB AMED_1637 IPR010359 IrrE N-terminal-like domain AMED_1637 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_1637 IPR001387 Cro/C1-type helix-turn-helix domain AMED_1638 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_1638 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AMED_1638 IPR040442 Pyruvate kinase-like domain superfamily AMED_1638 IPR006254 Isocitrate lyase AMED_1639 IPR001465 Malate synthase AMED_1639 IPR011076 Malate synthase-like superfamily AMED_1639 IPR019830 Malate synthase, conserved site AMED_1639 IPR006252 Malate synthase A AMED_1646 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_1646 IPR001296 Glycosyl transferase, family 1 AMED_1647 IPR013783 Immunoglobulin-like fold AMED_1647 IPR017853 Glycoside hydrolase superfamily AMED_1647 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_1647 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_1647 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_1647 IPR023232 Glycoside hydrolase, family 2, active site AMED_1647 IPR006101 Glycoside hydrolase, family 2 AMED_1647 IPR008979 Galactose-binding-like domain superfamily AMED_1647 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_1647 IPR023230 Glycoside hydrolase, family 2, conserved site AMED_1648 IPR036249 Thioredoxin-like superfamily AMED_1648 IPR033674 Thioredoxin/glutathione peroxidase BtuE AMED_1648 IPR000889 Glutathione peroxidase AMED_1648 IPR029760 Glutathione peroxidase conserved site AMED_1648 IPR029759 Glutathione peroxidase active site AMED_1649 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily AMED_1649 IPR004300 Glycoside hydrolase family 57, N-terminal domain AMED_1649 IPR015293 Domain of unknown function DUF1957 AMED_1649 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily AMED_1649 IPR040042 1,4-alpha-glucan branching enzyme MT3115-like AMED_1649 IPR037090 Glycoside hydrolase families 57, central domain AMED_1649 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMED_1650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1650 IPR013216 Methyltransferase type 11 AMED_1652 IPR003797 DegV AMED_1653 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMED_1653 IPR012255 Electron transfer flavoprotein, beta subunit AMED_1653 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal AMED_1653 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1653 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AMED_1654 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1654 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AMED_1654 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMED_1654 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AMED_1654 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AMED_1654 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMED_1654 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_1657 IPR011032 GroES-like superfamily AMED_1657 IPR036291 NAD(P)-binding domain superfamily AMED_1657 IPR010085 Crotonyl-CoA reductase AMED_1657 IPR013154 Alcohol dehydrogenase, N-terminal AMED_1657 IPR013149 Alcohol dehydrogenase, C-terminal AMED_1657 IPR020843 Polyketide synthase, enoylreductase domain AMED_1658 IPR000792 Transcription regulator LuxR, C-terminal AMED_1658 IPR011006 CheY-like superfamily AMED_1658 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1658 IPR001789 Signal transduction response regulator, receiver domain AMED_1659 IPR036259 MFS transporter superfamily AMED_1659 IPR020846 Major facilitator superfamily domain AMED_1659 IPR011701 Major facilitator superfamily AMED_1659 IPR023697 Multidrug resistance protein MdtL AMED_1660 IPR016454 Cysteine desulfurase AMED_1660 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1660 IPR000192 Aminotransferase class V domain AMED_1660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1661 IPR023382 Adenine nucleotide alpha hydrolase-like domains AMED_1661 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1661 IPR004506 tRNA-specific 2-thiouridylase AMED_1665 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_1665 IPR001279 Metallo-beta-lactamase AMED_1669 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AMED_1669 IPR010994 RuvA domain 2-like AMED_1669 IPR004150 NAD-dependent DNA ligase, OB-fold AMED_1669 IPR013840 NAD-dependent DNA ligase, N-terminal AMED_1669 IPR041663 DisA/LigA, helix-hairpin-helix motif AMED_1669 IPR036420 BRCT domain superfamily AMED_1669 IPR001679 NAD-dependent DNA ligase AMED_1669 IPR033136 NAD-dependent DNA ligase, conserved site AMED_1669 IPR018239 NAD-dependent DNA ligase, active site AMED_1669 IPR001357 BRCT domain AMED_1669 IPR013839 NAD-dependent DNA ligase, adenylation AMED_1669 IPR012340 Nucleic acid-binding, OB-fold AMED_1672 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C AMED_1672 IPR003837 Glu-tRNAGln amidotransferase C subunit AMED_1673 IPR020556 Amidase, conserved site AMED_1673 IPR023631 Amidase signature domain AMED_1673 IPR036928 Amidase signature (AS) superfamily AMED_1673 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMED_1673 IPR000120 Amidase AMED_1674 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AMED_1674 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AMED_1674 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AMED_1674 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AMED_1674 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AMED_1674 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_1674 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AMED_1674 IPR018027 Asn/Gln amidotransferase AMED_1674 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AMED_1679 IPR004104 Oxidoreductase, C-terminal AMED_1679 IPR036291 NAD(P)-binding domain superfamily AMED_1679 IPR000683 Oxidoreductase, N-terminal AMED_1681 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_1681 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_1681 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_1681 IPR036291 NAD(P)-binding domain superfamily AMED_1681 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_1683 IPR004404 Dihydroxy-acid dehydratase AMED_1683 IPR037237 IlvD/EDD, N-terminal domain AMED_1683 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMED_1683 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMED_1683 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMED_1685 IPR000399 TPP-binding enzyme, conserved site AMED_1685 IPR012846 Acetolactate synthase, large subunit, biosynthetic AMED_1685 IPR039368 Acetolactate synthase large subunit, TPP binding domain AMED_1685 IPR029061 Thiamin diphosphate-binding fold AMED_1685 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_1685 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_1685 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_1685 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_1686 IPR004789 Acetolactate synthase, small subunit AMED_1686 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMED_1686 IPR019455 Acetolactate synthase, small subunit, C-terminal AMED_1686 IPR002912 ACT domain AMED_1686 IPR039557 AHAS, ACT domain AMED_1687 IPR000506 Ketol-acid reductoisomerase, C-terminal AMED_1687 IPR013023 Ketol-acid reductoisomerase AMED_1687 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_1687 IPR014359 Ketol-acid reductoisomerase, prokaryotic AMED_1687 IPR036291 NAD(P)-binding domain superfamily AMED_1687 IPR013116 Ketol-acid reductoisomerase, N-terminal AMED_1693 IPR009057 Homeobox-like domain superfamily AMED_1693 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_1693 IPR001647 DNA-binding HTH domain, TetR-type AMED_1694 IPR002912 ACT domain AMED_1694 IPR029009 Allosteric substrate binding domain superfamily AMED_1694 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_1694 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_1694 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_1694 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_1694 IPR036291 NAD(P)-binding domain superfamily AMED_1694 IPR006236 D-3-phosphoglycerate dehydrogenase AMED_1695 IPR025965 FlgD Ig-like domain AMED_1695 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 AMED_1695 IPR034213 Vpr-like peptidase, catalytic domain AMED_1695 IPR015500 Peptidase S8, subtilisin-related AMED_1695 IPR022398 Peptidase S8, subtilisin, His-active site AMED_1695 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_1695 IPR036852 Peptidase S8/S53 domain superfamily AMED_1695 IPR000209 Peptidase S8/S53 domain AMED_1695 IPR003137 PA domain AMED_1695 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AMED_1695 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_1696 IPR023698 3-isopropylmalate dehydrogenase AMED_1696 IPR024084 Isopropylmalate dehydrogenase-like domain AMED_1696 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AMED_1697 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AMED_1697 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AMED_1697 IPR013785 Aldolase-type TIM barrel AMED_1697 IPR005675 Citramalate synthase AMED_1697 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AMED_1697 IPR000891 Pyruvate carboxyltransferase AMED_1698 IPR011234 Fumarylacetoacetase-like, C-terminal AMED_1698 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMED_1699 IPR002938 FAD-binding domain AMED_1699 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1701 IPR000119 Histone-like DNA-binding protein AMED_1701 IPR020816 Histone-like DNA-binding protein, conserved site AMED_1701 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMED_1702 IPR005158 Bacterial transcriptional activator domain AMED_1702 IPR002182 NB-ARC AMED_1702 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1702 IPR013026 Tetratricopeptide repeat-containing domain AMED_1702 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1702 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_1702 IPR019734 Tetratricopeptide repeat AMED_1702 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1702 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1710 IPR042261 Lsr2, dimerization domain AMED_1710 IPR042254 Lsr2, DNA binding domain AMED_1710 IPR024412 Lsr2 AMED_1712 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMED_1712 IPR020816 Histone-like DNA-binding protein, conserved site AMED_1712 IPR000119 Histone-like DNA-binding protein AMED_1714 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMED_1714 IPR004593 Nuclease SbcCD subunit D AMED_1714 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain AMED_1714 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_1714 IPR029052 Metallo-dependent phosphatase-like AMED_1715 IPR038729 Rad50/SbcC-type AAA domain AMED_1715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1716 IPR038729 Rad50/SbcC-type AAA domain AMED_1716 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1718 IPR019800 Glycoside hydrolase, family 3, active site AMED_1718 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_1718 IPR026891 Fibronectin type III-like domain AMED_1718 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_1718 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_1718 IPR017853 Glycoside hydrolase superfamily AMED_1718 IPR013783 Immunoglobulin-like fold AMED_1718 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_1722 IPR014757 Transcription regulator IclR, C-terminal AMED_1722 IPR005471 Transcription regulator IclR, N-terminal AMED_1722 IPR029016 GAF-like domain superfamily AMED_1722 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1722 IPR036390 Winged helix DNA-binding domain superfamily AMED_1723 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMED_1723 IPR004430 3-isopropylmalate dehydratase, large subunit AMED_1723 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMED_1723 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMED_1723 IPR036008 Aconitase, iron-sulfur domain AMED_1723 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AMED_1724 IPR033940 3-isopropylmalate dehydratase, swivel domain AMED_1724 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMED_1724 IPR004431 3-isopropylmalate dehydratase, small subunit AMED_1724 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMED_1725 IPR000119 Histone-like DNA-binding protein AMED_1725 IPR020816 Histone-like DNA-binding protein, conserved site AMED_1725 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMED_1726 IPR019734 Tetratricopeptide repeat AMED_1726 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1726 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_1726 IPR013026 Tetratricopeptide repeat-containing domain AMED_1726 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1726 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1726 IPR002182 NB-ARC AMED_1726 IPR005158 Bacterial transcriptional activator domain AMED_1726 IPR016032 Signal transduction response regulator, C-terminal effector AMED_1727 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_1727 IPR000086 NUDIX hydrolase domain AMED_1727 IPR020084 NUDIX hydrolase, conserved site AMED_1727 IPR015797 NUDIX hydrolase-like domain superfamily AMED_1727 IPR020476 NUDIX hydrolase AMED_1727 IPR029033 Histidine phosphatase superfamily AMED_1728 IPR041108 Polyphosphate kinase, C-terminal domain 1 AMED_1728 IPR025200 Polyphosphate kinase C-terminal domain 2 AMED_1728 IPR025198 Polyphosphate kinase N-terminal domain AMED_1728 IPR036832 Polyphosphate kinase N-terminal domain superfamily AMED_1728 IPR036830 Polyphosphate kinase middle domain superfamily AMED_1728 IPR003414 Polyphosphate kinase AMED_1728 IPR024953 Polyphosphate kinase middle domain AMED_1729 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC AMED_1729 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1731 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AMED_1731 IPR036291 NAD(P)-binding domain superfamily AMED_1731 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_1731 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AMED_1731 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AMED_1731 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_1733 IPR027473 L-asparaginase, C-terminal AMED_1733 IPR037152 L-asparaginase, N-terminal domain superfamily AMED_1733 IPR004550 L-asparaginase, type II AMED_1733 IPR036152 Asparaginase/glutaminase-like superfamily AMED_1733 IPR006034 Asparaginase/glutaminase-like AMED_1733 IPR027475 Asparaginase/glutaminase, active site 2 AMED_1733 IPR027474 L-asparaginase, N-terminal AMED_1733 IPR020827 Asparaginase/glutaminase, active site 1 AMED_1733 IPR040919 Asparaginase/glutaminase, C-terminal AMED_1735 IPR024932 Flavin transferase ApbE AMED_1735 IPR003374 ApbE-like superfamily AMED_1735 IPR042159 Flavin-trafficking protein ApbE AMED_1737 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_1737 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_1737 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_1737 IPR012675 Beta-grasp domain superfamily AMED_1737 IPR000951 Phthalate dioxygenase reductase AMED_1737 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_1737 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_1737 IPR017938 Riboflavin synthase-like beta-barrel AMED_1737 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_1738 IPR039420 Transcriptional regulatory protein WalR-like AMED_1738 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1738 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1738 IPR011006 CheY-like superfamily AMED_1738 IPR001789 Signal transduction response regulator, receiver domain AMED_1739 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_1739 IPR003660 HAMP domain AMED_1739 IPR003594 Histidine kinase/HSP90-like ATPase AMED_1739 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1739 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_1739 IPR005467 Histidine kinase domain AMED_1739 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_1741 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1741 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1741 IPR036390 Winged helix DNA-binding domain superfamily AMED_1741 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1741 IPR000524 Transcription regulator HTH, GntR AMED_1742 IPR011761 ATP-grasp fold AMED_1742 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AMED_1742 IPR005905 D-alanine--D-alanine ligase AMED_1742 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AMED_1742 IPR016185 Pre-ATP-grasp domain superfamily AMED_1742 IPR011095 D-alanine--D-alanine ligase, C-terminal AMED_1742 IPR013815 ATP-grasp fold, subdomain 1 AMED_1745 IPR010918 PurM-like, C-terminal domain AMED_1745 IPR036676 PurM-like, C-terminal domain superfamily AMED_1745 IPR016188 PurM-like, N-terminal domain AMED_1745 IPR036921 PurM-like, N-terminal domain superfamily AMED_1745 IPR006283 Thiamine-monophosphate kinase AMED_1747 IPR017853 Glycoside hydrolase superfamily AMED_1747 IPR013780 Glycosyl hydrolase, all-beta AMED_1747 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_1747 IPR002241 Glycoside hydrolase, family 27 AMED_1747 IPR013785 Aldolase-type TIM barrel AMED_1747 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_1748 IPR011004 Trimeric LpxA-like superfamily AMED_1748 IPR001451 Hexapeptide repeat AMED_1749 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMED_1749 IPR002043 Uracil-DNA glycosylase family 1 AMED_1749 IPR005122 Uracil-DNA glycosylase-like AMED_1749 IPR018085 Uracil-DNA glycosylase, active site AMED_1751 IPR037147 Ribosomal protein L28/L24 superfamily AMED_1751 IPR034704 L28p-like AMED_1751 IPR001383 Ribosomal protein L28 AMED_1751 IPR026569 Ribosomal protein L28/L24 AMED_1752 IPR036117 DhaL domain superfamily AMED_1752 IPR033470 Uncharacterised protein, DhaK domain AMED_1752 IPR019986 DAK2 domain-containing protein YloV AMED_1752 IPR004007 DhaL domain AMED_1753 IPR033454 RecG, wedge domain AMED_1753 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1753 IPR012340 Nucleic acid-binding, OB-fold AMED_1753 IPR001650 Helicase, C-terminal AMED_1753 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_1753 IPR011545 DEAD/DEAH box helicase domain AMED_1753 IPR004609 ATP-dependent DNA helicase RecG AMED_1756 IPR007815 Erythromycin esterase AMED_1756 IPR000836 Phosphoribosyltransferase domain AMED_1756 IPR029057 Phosphoribosyltransferase-like AMED_1758 IPR000209 Peptidase S8/S53 domain AMED_1758 IPR007280 Peptidase, C-terminal, archaeal/bacterial AMED_1758 IPR034193 Proteinase K-like catalytic domain AMED_1758 IPR036852 Peptidase S8/S53 domain superfamily AMED_1758 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_1758 IPR015500 Peptidase S8, subtilisin-related AMED_1758 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 AMED_1758 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_1758 IPR022398 Peptidase S8, subtilisin, His-active site AMED_1758 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AMED_1759 IPR032806 H repeat-associated protein, N-terminal AMED_1759 IPR002559 Transposase, IS4-like AMED_1761 IPR000891 Pyruvate carboxyltransferase AMED_1761 IPR011053 Single hybrid motif AMED_1761 IPR016185 Pre-ATP-grasp domain superfamily AMED_1761 IPR011054 Rudiment single hybrid motif AMED_1761 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_1761 IPR005930 Pyruvate carboxylase AMED_1761 IPR000089 Biotin/lipoyl attachment AMED_1761 IPR005482 Biotin carboxylase, C-terminal AMED_1761 IPR011764 Biotin carboxylation domain AMED_1761 IPR005481 Biotin carboxylase-like, N-terminal domain AMED_1761 IPR011761 ATP-grasp fold AMED_1761 IPR013785 Aldolase-type TIM barrel AMED_1761 IPR003379 Carboxylase, conserved domain AMED_1762 IPR006035 Ureohydrolase AMED_1762 IPR014033 Arginase AMED_1762 IPR020855 Ureohydrolase, manganese-binding site AMED_1762 IPR023696 Ureohydrolase domain superfamily AMED_1775 IPR005693 Virulence factor Mce protein AMED_1775 IPR003399 Mce/MlaD AMED_1780 IPR030802 ABC transporter permease MalE AMED_1780 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMED_1782 IPR011251 Luciferase-like domain AMED_1782 IPR019949 Luciferase family oxidoreductase, group 1 AMED_1782 IPR036661 Luciferase-like domain superfamily AMED_1783 IPR002938 FAD-binding domain AMED_1783 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1785 IPR041546 ClpA/ClpB, AAA lid domain AMED_1785 IPR001943 UVR domain AMED_1785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1785 IPR001270 ClpA/B family AMED_1785 IPR036628 Clp, N-terminal domain superfamily AMED_1785 IPR018368 ClpA/B, conserved site 1 AMED_1785 IPR003593 AAA+ ATPase domain AMED_1785 IPR003959 ATPase, AAA-type, core AMED_1785 IPR019489 Clp ATPase, C-terminal AMED_1785 IPR004176 Clp, N-terminal AMED_1786 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1786 IPR038765 Papain-like cysteine peptidase superfamily AMED_1786 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMED_1786 IPR001680 WD40 repeat AMED_1786 IPR019775 WD40 repeat, conserved site AMED_1786 IPR036322 WD40-repeat-containing domain superfamily AMED_1786 IPR020472 G-protein beta WD-40 repeat AMED_1786 IPR017986 WD40-repeat-containing domain AMED_1786 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain AMED_1786 IPR029030 Caspase-like domain superfamily AMED_1787 IPR027785 UvrD-like helicase C-terminal domain AMED_1787 IPR014016 UvrD-like helicase, ATP-binding domain AMED_1787 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1787 IPR000212 DNA helicase, UvrD/REP type AMED_1788 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1788 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMED_1788 IPR004398 RNA methyltransferase, RsmD AMED_1789 IPR001980 Phosphopantetheine adenylyltransferase AMED_1789 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1789 IPR004821 Cytidyltransferase-like domain AMED_1790 IPR016191 Ribonuclease/ribotoxin AMED_1790 IPR000026 Guanine-specific ribonuclease N1/T1/U2 AMED_1794 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMED_1795 IPR011332 Zinc-binding ribosomal protein AMED_1795 IPR002677 Ribosomal protein L32p AMED_1796 IPR014720 Double-stranded RNA-binding domain AMED_1796 IPR011907 Ribonuclease III AMED_1796 IPR000999 Ribonuclease III domain AMED_1796 IPR036389 Ribonuclease III, endonuclease domain superfamily AMED_1797 IPR012334 Pectin lyase fold AMED_1797 IPR011050 Pectin lyase fold/virulence factor AMED_1797 IPR039513 PL-6 family AMED_1798 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMED_1798 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMED_1798 IPR010663 Zinc finger, FPG/IleRS-type AMED_1798 IPR020629 Formamidopyrimidine-DNA glycosylase AMED_1798 IPR010979 Ribosomal protein S13-like, H2TH AMED_1798 IPR035937 MutM-like, N-terminal AMED_1798 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AMED_1802 IPR013658 SMP-30/Gluconolactonase/LRE-like region AMED_1802 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_1802 IPR005511 Senescence marker protein-30 (SMP-30) AMED_1802 IPR011042 Six-bladed beta-propeller, TolB-like AMED_1805 IPR000639 Epoxide hydrolase-like AMED_1805 IPR000073 Alpha/beta hydrolase fold-1 AMED_1805 IPR029058 Alpha/Beta hydrolase fold AMED_1807 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_1807 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMED_1807 IPR008146 Glutamine synthetase, catalytic domain AMED_1808 IPR011697 Peptidase C26 AMED_1808 IPR017926 Glutamine amidotransferase AMED_1808 IPR029062 Class I glutamine amidotransferase-like AMED_1809 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMED_1809 IPR015590 Aldehyde dehydrogenase domain AMED_1809 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_1809 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_1809 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_1809 IPR016161 Aldehyde/histidinol dehydrogenase AMED_1810 IPR036291 NAD(P)-binding domain superfamily AMED_1810 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1813 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1813 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1813 IPR003437 Glycine dehydrogenase (decarboxylating) AMED_1813 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1813 IPR020581 Glycine cleavage system P protein AMED_1814 IPR006223 Glycine cleavage system T protein AMED_1814 IPR022903 Glycine cleavage system T protein, bacteria AMED_1814 IPR028896 Aminomethyltransferase-like AMED_1814 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMED_1814 IPR006222 Aminomethyltransferase, folate-binding domain AMED_1814 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMED_1814 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMED_1815 IPR017453 Glycine cleavage system H-protein, subgroup AMED_1815 IPR011053 Single hybrid motif AMED_1815 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMED_1815 IPR000089 Biotin/lipoyl attachment AMED_1815 IPR002930 Glycine cleavage system H-protein AMED_1815 IPR033753 Glycine cleavage system H-protein/Simiate AMED_1816 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1816 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1816 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1816 IPR001085 Serine hydroxymethyltransferase AMED_1816 IPR039429 Serine hydroxymethyltransferase-like domain AMED_1816 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMED_1817 IPR003698 Lipoyl synthase AMED_1817 IPR006638 Elp3/MiaB/NifB AMED_1817 IPR031691 Lipoyl synthase, N-terminal AMED_1817 IPR013785 Aldolase-type TIM barrel AMED_1817 IPR007197 Radical SAM AMED_1818 IPR005131 Serine dehydratase beta chain AMED_1818 IPR005130 Serine dehydratase-like, alpha subunit AMED_1818 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AMED_1818 IPR029009 Allosteric substrate binding domain superfamily AMED_1819 IPR009057 Homeobox-like domain superfamily AMED_1819 IPR017277 Putative antitoxin VapB45-like AMED_1819 IPR007367 Protein of unknown function DUF433 AMED_1821 IPR000524 Transcription regulator HTH, GntR AMED_1821 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1821 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_1821 IPR011711 GntR, C-terminal AMED_1821 IPR036390 Winged helix DNA-binding domain superfamily AMED_1822 IPR001460 Penicillin-binding protein, transpeptidase AMED_1822 IPR036950 Penicillin binding protein transglycosylase domain AMED_1822 IPR023346 Lysozyme-like domain superfamily AMED_1822 IPR001264 Glycosyl transferase, family 51 AMED_1822 IPR012338 Beta-lactamase/transpeptidase-like AMED_1823 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1823 IPR002935 Class I-like SAM-dependent O-methyltransferase AMED_1824 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1824 IPR036390 Winged helix DNA-binding domain superfamily AMED_1824 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1824 IPR000524 Transcription regulator HTH, GntR AMED_1824 IPR004839 Aminotransferase, class I/classII AMED_1824 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1824 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1825 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1825 IPR002938 FAD-binding domain AMED_1827 IPR036291 NAD(P)-binding domain superfamily AMED_1827 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1829 IPR028202 Reductase, C-terminal AMED_1829 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_1829 IPR023753 FAD/NAD(P)-binding domain AMED_1829 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1830 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain AMED_1830 IPR000551 MerR-type HTH domain AMED_1830 IPR012925 TipAS antibiotic-recognition domain AMED_1830 IPR009061 Putative DNA-binding domain superfamily AMED_1832 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AMED_1832 IPR011701 Major facilitator superfamily AMED_1832 IPR020846 Major facilitator superfamily domain AMED_1832 IPR036259 MFS transporter superfamily AMED_1833 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMED_1833 IPR011234 Fumarylacetoacetase-like, C-terminal AMED_1834 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_1834 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_1834 IPR034610 L-fuconate dehydratase AMED_1834 IPR029065 Enolase C-terminal domain-like AMED_1834 IPR029017 Enolase-like, N-terminal AMED_1834 IPR036849 Enolase-like, C-terminal domain superfamily AMED_1835 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1835 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1835 IPR036291 NAD(P)-binding domain superfamily AMED_1836 IPR028082 Periplasmic binding protein-like I AMED_1836 IPR025997 Periplasmic binding protein AMED_1837 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1837 IPR015861 ABC transporter, ribose import, RbsA AMED_1837 IPR017871 ABC transporter, conserved site AMED_1837 IPR003439 ABC transporter-like AMED_1837 IPR003593 AAA+ ATPase domain AMED_1838 IPR001851 ABC transporter, permease AMED_1839 IPR011711 GntR, C-terminal AMED_1839 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_1839 IPR000524 Transcription regulator HTH, GntR AMED_1839 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1839 IPR036390 Winged helix DNA-binding domain superfamily AMED_1841 IPR023210 NADP-dependent oxidoreductase domain AMED_1841 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_1843 IPR007627 RNA polymerase sigma-70 region 2 AMED_1843 IPR039425 RNA polymerase sigma-70 like AMED_1843 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_1843 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1843 IPR013325 RNA polymerase sigma factor, region 2 AMED_1843 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1843 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_1843 IPR014284 RNA polymerase sigma-70 like domain AMED_1845 IPR003807 Domain of unknown function DUF202 AMED_1849 IPR036129 Glycerate kinase superfamily AMED_1849 IPR018197 Glycerate kinase, restriction-enzyme-like fold AMED_1849 IPR004381 Glycerate kinase AMED_1849 IPR018193 Glycerate kinase, flavodoxin-like fold AMED_1850 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_1850 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_1850 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_1850 IPR036291 NAD(P)-binding domain superfamily AMED_1851 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_1851 IPR038417 Alpha-galactosidase, N-terminal domain superfamily AMED_1851 IPR013785 Aldolase-type TIM barrel AMED_1851 IPR017853 Glycoside hydrolase superfamily AMED_1851 IPR002252 Glycoside hydrolase family 36 AMED_1851 IPR031705 Glycosyl hydrolase family 36, C-terminal AMED_1851 IPR031704 Glycosyl hydrolase family 36, N-terminal AMED_1851 IPR013780 Glycosyl hydrolase, all-beta AMED_1852 IPR023945 N-acetylmannosamine kinase, bacterial AMED_1852 IPR000600 ROK family AMED_1853 IPR006059 Bacterial extracellular solute-binding protein AMED_1854 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1854 IPR035906 MetI-like superfamily AMED_1855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_1855 IPR035906 MetI-like superfamily AMED_1856 IPR002241 Glycoside hydrolase, family 27 AMED_1856 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_1856 IPR017853 Glycoside hydrolase superfamily AMED_1856 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_1856 IPR013785 Aldolase-type TIM barrel AMED_1856 IPR013780 Glycosyl hydrolase, all-beta AMED_1857 IPR004165 Coenzyme A transferase family I AMED_1857 IPR037171 NagB/RpiA transferase-like AMED_1858 IPR037171 NagB/RpiA transferase-like AMED_1858 IPR004165 Coenzyme A transferase family I AMED_1859 IPR012793 Beta-ketoadipyl CoA thiolase AMED_1859 IPR002155 Thiolase AMED_1859 IPR016039 Thiolase-like AMED_1859 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_1859 IPR020610 Thiolase, active site AMED_1859 IPR020617 Thiolase, C-terminal AMED_1859 IPR020616 Thiolase, N-terminal AMED_1859 IPR020613 Thiolase, conserved site AMED_1860 IPR015889 Intradiol ring-cleavage dioxygenase, core AMED_1860 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal AMED_1860 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit AMED_1860 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AMED_1861 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit AMED_1861 IPR015889 Intradiol ring-cleavage dioxygenase, core AMED_1861 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AMED_1862 IPR029058 Alpha/Beta hydrolase fold AMED_1862 IPR000073 Alpha/beta hydrolase fold-1 AMED_1862 IPR026968 3-oxoadipate enol-lactonase 1/2 AMED_1862 IPR022742 Serine aminopeptidase, S33 AMED_1863 IPR003779 Carboxymuconolactone decarboxylase-like AMED_1863 IPR029032 AhpD-like AMED_1864 IPR029016 GAF-like domain superfamily AMED_1864 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR AMED_1864 IPR014757 Transcription regulator IclR, C-terminal AMED_1864 IPR005471 Transcription regulator IclR, N-terminal AMED_1864 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1864 IPR036390 Winged helix DNA-binding domain superfamily AMED_1865 IPR013482 Molybdenum cofactor guanylyltransferase AMED_1865 IPR029044 Nucleotide-diphospho-sugar transferases AMED_1865 IPR025877 MobA-like NTP transferase AMED_1866 IPR008268 Peptidase S16, active site AMED_1866 IPR027543 Lon protease, bacterial AMED_1866 IPR004815 Lon protease, bacterial/eukaryotic-type AMED_1866 IPR008269 Peptidase S16, Lon proteolytic domain AMED_1866 IPR027065 Lon protease AMED_1866 IPR003111 Lon, substrate-binding domain AMED_1866 IPR003959 ATPase, AAA-type, core AMED_1866 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1866 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_1866 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_1866 IPR015947 PUA-like superfamily AMED_1866 IPR003593 AAA+ ATPase domain AMED_1870 IPR036884 [2Fe-2S]-binding domain superfamily AMED_1870 IPR012675 Beta-grasp domain superfamily AMED_1870 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_1870 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_1870 IPR002888 [2Fe-2S]-binding AMED_1871 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_1871 IPR012780 Carbon-monoxide dehydrogenase, large subunit AMED_1871 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_1871 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_1871 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_1872 IPR016166 FAD-binding domain, PCMH-type AMED_1872 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_1872 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_1872 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_1872 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_1872 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_1872 IPR036318 FAD-binding, type PCMH-like superfamily AMED_1874 IPR000700 PAS-associated, C-terminal AMED_1874 IPR000160 GGDEF domain AMED_1874 IPR013656 PAS fold-4 AMED_1874 IPR000014 PAS domain AMED_1874 IPR035965 PAS domain superfamily AMED_1874 IPR029787 Nucleotide cyclase AMED_1875 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1875 IPR020946 Flavin monooxygenase-like AMED_1876 IPR020471 Aldo/keto reductase AMED_1876 IPR023210 NADP-dependent oxidoreductase domain AMED_1876 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_1878 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_1878 IPR039331 Purple acid phosphatase-like AMED_1878 IPR029052 Metallo-dependent phosphatase-like AMED_1881 IPR000399 TPP-binding enzyme, conserved site AMED_1881 IPR029061 Thiamin diphosphate-binding fold AMED_1881 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_1881 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_1881 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_1881 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_1881 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes AMED_1881 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase AMED_1882 IPR023770 5-deoxy-glucuronate isomerase, Bacilli AMED_1882 IPR021120 KduI/IolB isomerase AMED_1882 IPR014710 RmlC-like jelly roll fold AMED_1882 IPR011051 RmlC-like cupin domain superfamily AMED_1882 IPR024203 5-deoxy-glucuronate isomerase, IolB AMED_1884 IPR029056 Ribokinase-like AMED_1884 IPR011611 Carbohydrate kinase PfkB AMED_1884 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily AMED_1884 IPR030830 5-Dehydro-2-deoxygluconokinase AMED_1884 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_1884 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes AMED_1885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1885 IPR003439 ABC transporter-like AMED_1885 IPR003593 AAA+ ATPase domain AMED_1886 IPR001851 ABC transporter, permease AMED_1888 IPR023952 Inosose dehydratase AMED_1888 IPR013022 Xylose isomerase-like, TIM barrel domain AMED_1888 IPR036237 Xylose isomerase-like superfamily AMED_1888 IPR030823 IolE/MocC family AMED_1889 IPR000843 LacI-type HTH domain AMED_1889 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_1889 IPR028082 Periplasmic binding protein-like I AMED_1889 IPR023588 Transcription regulator HTH, PurR AMED_1890 IPR000683 Oxidoreductase, N-terminal AMED_1890 IPR036291 NAD(P)-binding domain superfamily AMED_1890 IPR004104 Oxidoreductase, C-terminal AMED_1891 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_1891 IPR033738 Asparagine synthase, N-terminal domain AMED_1891 IPR001962 Asparagine synthase AMED_1891 IPR006426 Asparagine synthase, glutamine-hydrolyzing AMED_1891 IPR017932 Glutamine amidotransferase type 2 domain AMED_1893 IPR004623 Potassium-transporting ATPase A chain AMED_1894 IPR018303 P-type ATPase, phosphorylation site AMED_1894 IPR006391 P-type ATPase, B chain, subfamily IA AMED_1894 IPR023214 HAD superfamily AMED_1894 IPR036412 HAD-like superfamily AMED_1894 IPR008250 P-type ATPase, A domain superfamily AMED_1894 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_1894 IPR023299 P-type ATPase, cytoplasmic domain N AMED_1894 IPR001757 P-type ATPase AMED_1895 IPR003820 Potassium-transporting ATPase C chain AMED_1896 IPR006016 UspA AMED_1896 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal AMED_1896 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_1896 IPR038318 KdpD, transmembrane domain superfamily AMED_1896 IPR025201 Sensor protein KdpD, transmembrane domain AMED_1896 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_1896 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1896 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_1896 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_1896 IPR005467 Histidine kinase domain AMED_1896 IPR003594 Histidine kinase/HSP90-like ATPase AMED_1896 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_1897 IPR039420 Transcriptional regulatory protein WalR-like AMED_1897 IPR011006 CheY-like superfamily AMED_1897 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1897 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_1897 IPR001789 Signal transduction response regulator, receiver domain AMED_1902 IPR020456 Acylphosphatase AMED_1902 IPR001792 Acylphosphatase-like domain AMED_1902 IPR036046 Acylphosphatase-like domain superfamily AMED_1902 IPR017968 Acylphosphatase, conserved site AMED_1903 IPR003395 RecF/RecN/SMC, N-terminal AMED_1903 IPR024704 Structural maintenance of chromosomes protein AMED_1903 IPR011890 Structural maintenance of chromosomes protein, prokaryotic AMED_1903 IPR010935 SMCs flexible hinge AMED_1903 IPR036277 SMCs flexible hinge superfamily AMED_1903 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1905 IPR018212 Sodium/solute symporter, conserved site AMED_1905 IPR038377 Sodium/glucose symporter superfamily AMED_1905 IPR001734 Sodium/solute symporter AMED_1906 IPR005338 Anhydro-N-acetylmuramic acid kinase AMED_1907 IPR013822 Signal recognition particle SRP54, helical bundle AMED_1907 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1907 IPR004390 Signal-recognition particle receptor FtsY AMED_1907 IPR036225 SRP/SRP receptor, N-terminal AMED_1907 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMED_1907 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AMED_1907 IPR003593 AAA+ ATPase domain AMED_1910 IPR014757 Transcription regulator IclR, C-terminal AMED_1910 IPR005471 Transcription regulator IclR, N-terminal AMED_1910 IPR036390 Winged helix DNA-binding domain superfamily AMED_1910 IPR029016 GAF-like domain superfamily AMED_1910 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1911 IPR001465 Malate synthase AMED_1911 IPR011076 Malate synthase-like superfamily AMED_1911 IPR019830 Malate synthase, conserved site AMED_1911 IPR006252 Malate synthase A AMED_1916 IPR023954 C4-dicarboxylate transport protein AMED_1916 IPR036458 Sodium:dicarboxylate symporter superfamily AMED_1916 IPR018107 Sodium:dicarboxylate symporter, conserved site AMED_1916 IPR001991 Sodium:dicarboxylate symporter AMED_1918 IPR041522 CdaR, GGDEF-like domain AMED_1918 IPR008599 Putative sugar diacid recognition AMED_1918 IPR025736 PucR C-terminal helix-turn-helix domain AMED_1918 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_1919 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_1919 IPR016166 FAD-binding domain, PCMH-type AMED_1919 IPR036318 FAD-binding, type PCMH-like superfamily AMED_1919 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_1919 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_1919 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_1920 IPR012675 Beta-grasp domain superfamily AMED_1920 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_1920 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_1920 IPR002888 [2Fe-2S]-binding AMED_1920 IPR036884 [2Fe-2S]-binding domain superfamily AMED_1920 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_1921 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_1921 IPR032466 Metal-dependent hydrolase AMED_1921 IPR006680 Amidohydrolase-related AMED_1922 IPR017609 Xanthine dehydrogenase D subunit AMED_1922 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_1922 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_1922 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_1922 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_1923 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_1923 IPR002241 Glycoside hydrolase, family 27 AMED_1923 IPR013780 Glycosyl hydrolase, all-beta AMED_1923 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_1923 IPR013785 Aldolase-type TIM barrel AMED_1923 IPR017853 Glycoside hydrolase superfamily AMED_1924 IPR001647 DNA-binding HTH domain, TetR-type AMED_1924 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1924 IPR009057 Homeobox-like domain superfamily AMED_1926 IPR019842 Uricase, conserved site AMED_1926 IPR002042 Uricase AMED_1927 IPR023419 Transthyretin, conserved site AMED_1927 IPR014306 Hydroxyisourate hydrolase AMED_1927 IPR023418 Transthyretin, thyroxine binding site AMED_1927 IPR000895 Transthyretin/hydroxyisourate hydrolase AMED_1927 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily AMED_1927 IPR023416 Transthyretin/hydroxyisourate hydrolase domain AMED_1930 IPR032466 Metal-dependent hydrolase AMED_1930 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_1930 IPR017593 Allantoinase AMED_1930 IPR006680 Amidohydrolase-related AMED_1931 IPR008979 Galactose-binding-like domain superfamily AMED_1931 IPR015908 Allantoicase domain AMED_1931 IPR005164 Allantoicase AMED_1933 IPR036291 NAD(P)-binding domain superfamily AMED_1933 IPR003781 CoA-binding AMED_1934 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMED_1934 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AMED_1934 IPR015424 Pyridoxal phosphate-dependent transferase AMED_1934 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_1934 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_1937 IPR036390 Winged helix DNA-binding domain superfamily AMED_1937 IPR005119 LysR, substrate-binding AMED_1937 IPR000847 Transcription regulator HTH, LysR AMED_1937 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1938 IPR013325 RNA polymerase sigma factor, region 2 AMED_1938 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_1938 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1938 IPR032710 NTF2-like domain superfamily AMED_1938 IPR014284 RNA polymerase sigma-70 like domain AMED_1938 IPR037401 SnoaL-like domain AMED_1938 IPR007627 RNA polymerase sigma-70 region 2 AMED_1938 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1940 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted AMED_1940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1941 IPR001905 Ammonium transporter AMED_1941 IPR029020 Ammonium/urea transporter AMED_1941 IPR024041 Ammonium transporter AmtB-like domain AMED_1941 IPR018047 Ammonium transporter, conserved site AMED_1942 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMED_1942 IPR017918 Nitrogen regulatory protein PII, conserved site AMED_1942 IPR002187 Nitrogen regulatory protein PII AMED_1942 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMED_1942 IPR002332 Nitrogen regulatory protein P-II, urydylation site AMED_1943 IPR003607 HD/PDEase domain AMED_1943 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AMED_1943 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme AMED_1943 IPR002912 ACT domain AMED_1943 IPR006674 HD domain AMED_1944 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_1944 IPR002938 FAD-binding domain AMED_1947 IPR029787 Nucleotide cyclase AMED_1947 IPR000160 GGDEF domain AMED_1947 IPR013656 PAS fold-4 AMED_1947 IPR000014 PAS domain AMED_1947 IPR000700 PAS-associated, C-terminal AMED_1947 IPR035965 PAS domain superfamily AMED_1948 IPR036291 NAD(P)-binding domain superfamily AMED_1948 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_1948 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_1949 IPR001647 DNA-binding HTH domain, TetR-type AMED_1949 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_1949 IPR009057 Homeobox-like domain superfamily AMED_1951 IPR016194 SPOC-like, C-terminal domain superfamily AMED_1951 IPR006164 Ku70/Ku80 beta-barrel domain AMED_1951 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMED_1953 IPR003439 ABC transporter-like AMED_1953 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1953 IPR017871 ABC transporter, conserved site AMED_1953 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_1953 IPR039421 Type I protein exporter AMED_1953 IPR003593 AAA+ ATPase domain AMED_1953 IPR011527 ABC transporter type 1, transmembrane domain AMED_1953 IPR011917 ABC transporter, lipid A export, MsbA AMED_1954 IPR022941 Signal recognition particle, SRP54 subunit AMED_1954 IPR013822 Signal recognition particle SRP54, helical bundle AMED_1954 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AMED_1954 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1954 IPR004780 Signal recognition particle protein AMED_1954 IPR003593 AAA+ ATPase domain AMED_1954 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AMED_1954 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMED_1954 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AMED_1955 IPR032466 Metal-dependent hydrolase AMED_1955 IPR006680 Amidohydrolase-related AMED_1958 IPR023803 Ribosomal protein S16 domain superfamily AMED_1958 IPR020592 Ribosomal protein S16, conserved site AMED_1958 IPR000307 Ribosomal protein S16 AMED_1959 IPR015946 K homology domain-like, alpha/beta AMED_1959 IPR020627 Uncharacterised protein family UPF0109 AMED_1959 IPR009019 K homology domain superfamily, prokaryotic type AMED_1960 IPR027275 PRC-barrel domain AMED_1960 IPR002676 RimM, N-terminal AMED_1960 IPR009000 Translation protein, beta-barrel domain superfamily AMED_1960 IPR036976 RimM, N-terminal domain superfamily AMED_1960 IPR011033 PRC-barrel-like superfamily AMED_1960 IPR011961 16S rRNA processing protein RimM AMED_1962 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AMED_1962 IPR029028 Alpha/beta knot methyltransferases AMED_1962 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AMED_1962 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AMED_1962 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_1963 IPR001857 Ribosomal protein L19 AMED_1963 IPR008991 Translation protein SH3-like domain superfamily AMED_1963 IPR038657 Ribosomal protein L19 superfamily AMED_1963 IPR018257 Ribosomal protein L19, conserved site AMED_1964 IPR000223 Peptidase S26A, signal peptidase I AMED_1964 IPR019758 Peptidase S26A, signal peptidase I, conserved site AMED_1964 IPR036286 LexA/Signal peptidase-like superfamily AMED_1964 IPR019533 Peptidase S26 AMED_1964 IPR019756 Peptidase S26A, signal peptidase I, serine active site AMED_1965 IPR001352 Ribonuclease HII/HIII AMED_1965 IPR022898 Ribonuclease HII AMED_1965 IPR024567 Ribonuclease HII/HIII domain AMED_1965 IPR036397 Ribonuclease H superfamily AMED_1965 IPR012337 Ribonuclease H-like superfamily AMED_1966 IPR019592 Protein of unknown function DUF2469 AMED_1967 IPR011335 Restriction endonuclease type II-like AMED_1967 IPR011856 tRNA endonuclease-like domain superfamily AMED_1967 IPR003509 Uncharacterised protein family UPF0102 AMED_1968 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_1968 IPR025158 Mg chelatase-related protein, C-terminal domain AMED_1968 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_1968 IPR004482 Mg chelatase-related protein AMED_1968 IPR003593 AAA+ ATPase domain AMED_1968 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1968 IPR000523 Magnesium chelatase ChlI domain AMED_1969 IPR003488 DNA recombination-mediator protein A AMED_1969 IPR041614 DprA, winged helix domain AMED_1970 IPR004107 Integrase, SAM-like, N-terminal AMED_1970 IPR010998 Integrase/recombinase, N-terminal AMED_1970 IPR002104 Integrase, catalytic domain AMED_1970 IPR023009 Tyrosine recombinase XerC/XerD AMED_1970 IPR013762 Integrase-like, catalytic domain superfamily AMED_1970 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_1971 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_1971 IPR007630 RNA polymerase sigma-70 region 4 AMED_1971 IPR007624 RNA polymerase sigma-70 region 3 AMED_1971 IPR007627 RNA polymerase sigma-70 region 2 AMED_1971 IPR000943 RNA polymerase sigma-70 AMED_1971 IPR014284 RNA polymerase sigma-70 like domain AMED_1971 IPR013325 RNA polymerase sigma factor, region 2 AMED_1971 IPR012845 RNA polymerase sigma factor, FliA/WhiG AMED_1972 IPR011055 Duplicated hybrid motif AMED_1972 IPR016047 Peptidase M23 AMED_1973 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMED_1973 IPR018130 Ribosomal protein S2, conserved site AMED_1973 IPR001865 Ribosomal protein S2 AMED_1973 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AMED_1974 IPR009060 UBA-like superfamily AMED_1974 IPR036402 Elongation factor Ts, dimerisation domain superfamily AMED_1974 IPR001816 Translation elongation factor EFTs/EF1B AMED_1974 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AMED_1974 IPR018101 Translation elongation factor Ts, conserved site AMED_1975 IPR036393 Acetylglutamate kinase-like superfamily AMED_1975 IPR001048 Aspartate/glutamate/uridylate kinase AMED_1975 IPR011817 Uridylate kinase AMED_1975 IPR015963 Uridylate kinase, bacteria AMED_1976 IPR036191 RRF superfamily AMED_1976 IPR023584 Ribosome recycling factor domain AMED_1976 IPR002661 Ribosome recycling factor AMED_1977 IPR000374 Phosphatidate cytidylyltransferase AMED_1979 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1979 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_1979 IPR025714 Methyltransferase domain AMED_1979 IPR026669 Arsenite methyltransferase-like AMED_1979 IPR036390 Winged helix DNA-binding domain superfamily AMED_1979 IPR005149 Transcription regulator PadR, N-terminal AMED_1980 IPR036390 Winged helix DNA-binding domain superfamily AMED_1980 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_1980 IPR005149 Transcription regulator PadR, N-terminal AMED_1980 IPR011991 ArsR-like helix-turn-helix domain AMED_1981 IPR000522 ABC transporter, permease protein, BtuC-like AMED_1981 IPR037294 ABC transporter, BtuC-like AMED_1982 IPR000522 ABC transporter, permease protein, BtuC-like AMED_1982 IPR037294 ABC transporter, BtuC-like AMED_1983 IPR017871 ABC transporter, conserved site AMED_1983 IPR003439 ABC transporter-like AMED_1983 IPR003593 AAA+ ATPase domain AMED_1983 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1984 IPR002491 ABC transporter periplasmic binding domain AMED_1985 IPR020826 Transketolase binding site AMED_1985 IPR005474 Transketolase, N-terminal AMED_1985 IPR033247 Transketolase family AMED_1985 IPR029061 Thiamin diphosphate-binding fold AMED_1985 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_1985 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_1985 IPR005478 Transketolase, bacterial-like AMED_1985 IPR033248 Transketolase, C-terminal domain AMED_1987 IPR040072 Methyltransferase (Class A) AMED_1987 IPR013785 Aldolase-type TIM barrel AMED_1987 IPR007197 Radical SAM AMED_1987 IPR027492 Dual-specificity RNA methyltransferase RlmN AMED_1987 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AMED_1989 IPR022385 Rhs repeat-associated core AMED_1989 IPR031325 RHS repeat AMED_1989 IPR006530 YD repeat AMED_1989 IPR008979 Galactose-binding-like domain superfamily AMED_1992 IPR031034 Creatinine amidohydrolase AMED_1992 IPR024087 Creatininase-like superfamily AMED_1992 IPR003785 Creatininase/formamide hydrolase AMED_1993 IPR004113 FAD-linked oxidase, C-terminal AMED_1993 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMED_1993 IPR006094 FAD linked oxidase, N-terminal AMED_1993 IPR016164 FAD-linked oxidase-like, C-terminal AMED_1993 IPR036318 FAD-binding, type PCMH-like superfamily AMED_1993 IPR016166 FAD-binding domain, PCMH-type AMED_1996 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_1996 IPR003439 ABC transporter-like AMED_1996 IPR003593 AAA+ ATPase domain AMED_1997 IPR013108 Amidohydrolase 3 AMED_1997 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_1997 IPR032466 Metal-dependent hydrolase AMED_1998 IPR001387 Cro/C1-type helix-turn-helix domain AMED_1998 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_1999 IPR012675 Beta-grasp domain superfamily AMED_1999 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_1999 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_1999 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_1999 IPR000951 Phthalate dioxygenase reductase AMED_1999 IPR017938 Riboflavin synthase-like beta-barrel AMED_1999 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_1999 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_1999 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_2000 IPR023512 Deaminase MtaD/DadD AMED_2000 IPR006680 Amidohydrolase-related AMED_2000 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_2000 IPR032466 Metal-dependent hydrolase AMED_2006 IPR006656 Molybdopterin oxidoreductase AMED_2006 IPR006657 Molybdopterin dinucleotide-binding domain AMED_2006 IPR037949 Acetylene hydratase, MopB domain AMED_2006 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_2006 IPR041930 Acetylene hydratase AMED_2008 IPR000551 MerR-type HTH domain AMED_2008 IPR009061 Putative DNA-binding domain superfamily AMED_2009 IPR004638 Drug resistance transporter EmrB-like AMED_2009 IPR011701 Major facilitator superfamily AMED_2009 IPR020846 Major facilitator superfamily domain AMED_2009 IPR036259 MFS transporter superfamily AMED_2009 IPR005829 Sugar transporter, conserved site AMED_2012 IPR005545 YCII-related AMED_2012 IPR011008 Dimeric alpha-beta barrel AMED_2013 IPR016040 NAD(P)-binding domain AMED_2013 IPR036291 NAD(P)-binding domain superfamily AMED_2015 IPR020843 Polyketide synthase, enoylreductase domain AMED_2015 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_2015 IPR013968 Polyketide synthase, ketoreductase domain AMED_2015 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_2015 IPR015083 Polyketide synthase, docking domain AMED_2015 IPR009081 Phosphopantetheine binding ACP domain AMED_2015 IPR020807 Polyketide synthase, dehydratase domain AMED_2015 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_2015 IPR006162 Phosphopantetheine attachment site AMED_2015 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_2015 IPR036291 NAD(P)-binding domain superfamily AMED_2015 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_2015 IPR016039 Thiolase-like AMED_2015 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_2015 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_2015 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_2015 IPR011032 GroES-like superfamily AMED_2015 IPR013154 Alcohol dehydrogenase, N-terminal AMED_2015 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_2015 IPR014043 Acyl transferase AMED_2015 IPR036736 ACP-like superfamily AMED_2015 IPR001227 Acyl transferase domain superfamily AMED_2015 IPR018201 Beta-ketoacyl synthase, active site AMED_2016 IPR001387 Cro/C1-type helix-turn-helix domain AMED_2016 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_2018 IPR011008 Dimeric alpha-beta barrel AMED_2018 IPR005545 YCII-related AMED_2019 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2019 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_2019 IPR013325 RNA polymerase sigma factor, region 2 AMED_2019 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2019 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_2019 IPR014284 RNA polymerase sigma-70 like domain AMED_2019 IPR007627 RNA polymerase sigma-70 region 2 AMED_2020 IPR029045 ClpP/crotonase-like domain superfamily AMED_2020 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_2020 IPR001753 Enoyl-CoA hydratase/isomerase AMED_2022 IPR036249 Thioredoxin-like superfamily AMED_2022 IPR006659 Arsenate reductase AMED_2022 IPR006660 Arsenate reductase-like AMED_2023 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_2023 IPR026260 Threonine synthase, bacterial/archaeal AMED_2023 IPR004450 Threonine synthase-like AMED_2023 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_2023 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_2025 IPR036291 NAD(P)-binding domain superfamily AMED_2025 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2025 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2026 IPR005119 LysR, substrate-binding AMED_2026 IPR000847 Transcription regulator HTH, LysR AMED_2026 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2026 IPR036390 Winged helix DNA-binding domain superfamily AMED_2027 IPR002397 Cytochrome P450, B-class AMED_2027 IPR036396 Cytochrome P450 superfamily AMED_2027 IPR001128 Cytochrome P450 AMED_2028 IPR029058 Alpha/Beta hydrolase fold AMED_2028 IPR000073 Alpha/beta hydrolase fold-1 AMED_2028 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase AMED_2029 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_2029 IPR005158 Bacterial transcriptional activator domain AMED_2029 IPR002182 NB-ARC AMED_2029 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_2029 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2029 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2029 IPR019734 Tetratricopeptide repeat AMED_2029 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2031 IPR025714 Methyltransferase domain AMED_2031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2032 IPR004839 Aminotransferase, class I/classII AMED_2032 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2032 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2032 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2032 IPR000524 Transcription regulator HTH, GntR AMED_2032 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2032 IPR036390 Winged helix DNA-binding domain superfamily AMED_2033 IPR020846 Major facilitator superfamily domain AMED_2033 IPR004638 Drug resistance transporter EmrB-like AMED_2033 IPR036259 MFS transporter superfamily AMED_2033 IPR011701 Major facilitator superfamily AMED_2034 IPR029000 Cyclophilin-like domain superfamily AMED_2034 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMED_2036 IPR036169 DXP reductoisomerase, C-terminal domain superfamily AMED_2036 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal AMED_2036 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal AMED_2036 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMED_2036 IPR036291 NAD(P)-binding domain superfamily AMED_2036 IPR026877 DXP reductoisomerase C-terminal domain AMED_2037 IPR036034 PDZ superfamily AMED_2037 IPR041489 PDZ domain 6 AMED_2037 IPR008915 Peptidase M50 AMED_2037 IPR001478 PDZ domain AMED_2038 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type AMED_2038 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial AMED_2038 IPR011005 Dihydropteroate synthase-like AMED_2044 IPR000182 GNAT domain AMED_2044 IPR017813 Mycothiol acetyltransferase AMED_2044 IPR016181 Acyl-CoA N-acyltransferase AMED_2045 IPR001460 Penicillin-binding protein, transpeptidase AMED_2045 IPR012338 Beta-lactamase/transpeptidase-like AMED_2046 IPR036005 Creatinase/aminopeptidase-like AMED_2046 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AMED_2046 IPR001714 Peptidase M24, methionine aminopeptidase AMED_2046 IPR000994 Peptidase M24 AMED_2047 IPR000412 ABC-2 transporter AMED_2047 IPR013525 ABC-2 type transporter AMED_2048 IPR025302 Domain of unknown function DUF4162 AMED_2048 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_2048 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2048 IPR003593 AAA+ ATPase domain AMED_2048 IPR003439 ABC transporter-like AMED_2048 IPR017871 ABC transporter, conserved site AMED_2051 IPR011711 GntR, C-terminal AMED_2051 IPR036390 Winged helix DNA-binding domain superfamily AMED_2051 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2051 IPR000524 Transcription regulator HTH, GntR AMED_2051 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_2053 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2053 IPR023753 FAD/NAD(P)-binding domain AMED_2053 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_2053 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_2053 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_2053 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMED_2053 IPR017817 Mycothione reductase AMED_2055 IPR009003 Peptidase S1, PA clan AMED_2055 IPR001314 Peptidase S1A, chymotrypsin family AMED_2055 IPR033116 Serine proteases, trypsin family, serine active site AMED_2055 IPR001254 Serine proteases, trypsin domain AMED_2055 IPR018114 Serine proteases, trypsin family, histidine active site AMED_2056 IPR000182 GNAT domain AMED_2056 IPR016181 Acyl-CoA N-acyltransferase AMED_2057 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2057 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2057 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMED_2057 IPR004839 Aminotransferase, class I/classII AMED_2057 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2058 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_2058 IPR014014 RNA helicase, DEAD-box type, Q motif AMED_2058 IPR011545 DEAD/DEAH box helicase domain AMED_2058 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2058 IPR001650 Helicase, C-terminal AMED_2058 IPR028622 ATP-dependent RNA helicase RhlE AMED_2058 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMED_2060 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2066 IPR005119 LysR, substrate-binding AMED_2066 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2066 IPR036390 Winged helix DNA-binding domain superfamily AMED_2066 IPR000847 Transcription regulator HTH, LysR AMED_2068 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2068 IPR006076 FAD dependent oxidoreductase AMED_2069 IPR005583 Peroxide stress protein YaaA AMED_2073 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_2073 IPR036291 NAD(P)-binding domain superfamily AMED_2073 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_2073 IPR023514 Glyoxylate/hydroxypyruvate reductase A AMED_2074 IPR018584 Glycosyltransferase family 87 AMED_2076 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_2076 IPR004154 Anticodon-binding AMED_2076 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMED_2076 IPR002316 Proline-tRNA ligase, class IIa AMED_2076 IPR036621 Anticodon-binding domain superfamily AMED_2076 IPR033730 Prokaryote proline-tRNA ligase core domain AMED_2076 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AMED_2076 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AMED_2076 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AMED_2076 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AMED_2079 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMED_2084 IPR000792 Transcription regulator LuxR, C-terminal AMED_2084 IPR001789 Signal transduction response regulator, receiver domain AMED_2084 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2084 IPR011006 CheY-like superfamily AMED_2087 IPR005804 Fatty acid desaturase domain AMED_2088 IPR000971 Globin AMED_2088 IPR009050 Globin-like superfamily AMED_2088 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_2088 IPR023950 Flavohemoprotein AMED_2088 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_2088 IPR017938 Riboflavin synthase-like beta-barrel AMED_2088 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_2088 IPR012292 Globin/Protoglobin AMED_2088 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_2089 IPR009057 Homeobox-like domain superfamily AMED_2089 IPR001647 DNA-binding HTH domain, TetR-type AMED_2089 IPR023764 Transcriptional repressor HTH, FabR AMED_2090 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AMED_2090 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMED_2090 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AMED_2090 IPR036291 NAD(P)-binding domain superfamily AMED_2090 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMED_2091 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AMED_2092 IPR012136 NADP transhydrogenase, beta subunit AMED_2092 IPR034300 NADP transhydrogenase beta-like domain AMED_2092 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_2095 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2095 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMED_2095 IPR036163 Heavy metal-associated domain superfamily AMED_2095 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_2095 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_2095 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_2095 IPR021179 Mercury(II) reductase AMED_2095 IPR017969 Heavy-metal-associated, conserved site AMED_2095 IPR006121 Heavy metal-associated domain, HMA AMED_2095 IPR023753 FAD/NAD(P)-binding domain AMED_2099 IPR016039 Thiolase-like AMED_2099 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_2099 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_2099 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_2099 IPR000794 Beta-ketoacyl synthase AMED_2100 IPR009081 Phosphopantetheine binding ACP domain AMED_2100 IPR003231 Acyl carrier protein (ACP) AMED_2100 IPR036736 ACP-like superfamily AMED_2101 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMED_2101 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMED_2101 IPR016039 Thiolase-like AMED_2101 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMED_2102 IPR014043 Acyl transferase AMED_2102 IPR001227 Acyl transferase domain superfamily AMED_2102 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_2102 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_2104 IPR041522 CdaR, GGDEF-like domain AMED_2104 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_2104 IPR025736 PucR C-terminal helix-turn-helix domain AMED_2105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2105 IPR025302 Domain of unknown function DUF4162 AMED_2105 IPR017871 ABC transporter, conserved site AMED_2105 IPR003593 AAA+ ATPase domain AMED_2105 IPR003439 ABC transporter-like AMED_2108 IPR006419 Nicotinamide mononucleotide transporter PnuC AMED_2109 IPR003804 L-lactate permease AMED_2111 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2111 IPR036291 NAD(P)-binding domain superfamily AMED_2112 IPR013785 Aldolase-type TIM barrel AMED_2112 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AMED_2112 IPR000262 FMN-dependent dehydrogenase AMED_2112 IPR037396 FMN hydroxy acid dehydrogenase domain AMED_2112 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AMED_2113 IPR005474 Transketolase, N-terminal AMED_2113 IPR029061 Thiamin diphosphate-binding fold AMED_2113 IPR004660 Pyruvate dehydrogenase E1 component AMED_2113 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal AMED_2113 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_2113 IPR041621 Pyruvate dehydrogenase E1 component, middle domain AMED_2114 IPR021412 Protein of unknown function DUF3052 AMED_2115 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMED_2115 IPR013766 Thioredoxin domain AMED_2115 IPR036249 Thioredoxin-like superfamily AMED_2115 IPR024706 Peroxiredoxin, AhpC-type AMED_2116 IPR006118 Recombinase, conserved site AMED_2116 IPR006119 Resolvase, N-terminal catalytic domain AMED_2116 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily AMED_2116 IPR006120 Resolvase, HTH domain AMED_2116 IPR009057 Homeobox-like domain superfamily AMED_2118 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2118 IPR001091 Restriction/modification DNA-methylase AMED_2118 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site AMED_2118 IPR002941 DNA methylase N-4/N-6 AMED_2133 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase AMED_2133 IPR000639 Epoxide hydrolase-like AMED_2133 IPR000073 Alpha/beta hydrolase fold-1 AMED_2133 IPR029058 Alpha/Beta hydrolase fold AMED_2134 IPR000594 THIF-type NAD/FAD binding fold AMED_2134 IPR035985 Ubiquitin-activating enzyme AMED_2139 IPR011701 Major facilitator superfamily AMED_2139 IPR020846 Major facilitator superfamily domain AMED_2139 IPR036259 MFS transporter superfamily AMED_2143 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_2143 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2143 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2143 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2143 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2143 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2143 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2144 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2144 IPR036291 NAD(P)-binding domain superfamily AMED_2144 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2145 IPR000192 Aminotransferase class V domain AMED_2145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2145 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMED_2145 IPR010240 Cysteine desulfurase IscS AMED_2145 IPR016454 Cysteine desulfurase AMED_2145 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2146 IPR000524 Transcription regulator HTH, GntR AMED_2146 IPR011711 GntR, C-terminal AMED_2146 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_2146 IPR036390 Winged helix DNA-binding domain superfamily AMED_2146 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2147 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_2147 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA AMED_2147 IPR029052 Metallo-dependent phosphatase-like AMED_2149 IPR018951 Fumarase C, C-terminal AMED_2149 IPR004708 Aspartate ammonia-lyase AMED_2149 IPR024083 Fumarase/histidase, N-terminal AMED_2149 IPR020557 Fumarate lyase, conserved site AMED_2149 IPR000362 Fumarate lyase family AMED_2149 IPR022761 Fumarate lyase, N-terminal AMED_2149 IPR008948 L-Aspartase-like AMED_2151 IPR004840 Amino acid permease, conserved site AMED_2151 IPR004841 Amino acid permease/ SLC12A domain AMED_2152 IPR000524 Transcription regulator HTH, GntR AMED_2152 IPR011711 GntR, C-terminal AMED_2152 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_2152 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2152 IPR036390 Winged helix DNA-binding domain superfamily AMED_2153 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AMED_2153 IPR040982 DNA polymerase III alpha subunit finger domain AMED_2153 IPR029460 DNA polymerase, helix-hairpin-helix motif AMED_2153 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_2153 IPR004013 PHP domain AMED_2153 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMED_2153 IPR016195 Polymerase/histidinol phosphatase-like AMED_2153 IPR004805 DNA polymerase III, alpha subunit AMED_2153 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AMED_2154 IPR020846 Major facilitator superfamily domain AMED_2154 IPR036259 MFS transporter superfamily AMED_2154 IPR011701 Major facilitator superfamily AMED_2156 IPR038063 L,D-transpeptidase catalytic domain-like AMED_2156 IPR005490 L,D-transpeptidase catalytic domain AMED_2156 IPR041280 Bacterial Ig domain, transpeptidase-associated AMED_2158 IPR032818 DedA family AMED_2158 IPR032816 SNARE associated Golgi protein AMED_2159 IPR013785 Aldolase-type TIM barrel AMED_2159 IPR006638 Elp3/MiaB/NifB AMED_2159 IPR007197 Radical SAM AMED_2159 IPR003698 Lipoyl synthase AMED_2159 IPR031691 Lipoyl synthase, N-terminal AMED_2160 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2160 IPR036291 NAD(P)-binding domain superfamily AMED_2162 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2162 IPR009057 Homeobox-like domain superfamily AMED_2162 IPR001647 DNA-binding HTH domain, TetR-type AMED_2164 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMED_2164 IPR020605 Octanoyltransferase, conserved site AMED_2164 IPR000544 Octanoyltransferase AMED_2166 IPR013549 Domain of unknown function DUF1731 AMED_2166 IPR010099 Epimerase family protein SDR39U1 AMED_2166 IPR001509 NAD-dependent epimerase/dehydratase AMED_2166 IPR036291 NAD(P)-binding domain superfamily AMED_2168 IPR011053 Single hybrid motif AMED_2168 IPR004167 Peripheral subunit-binding domain AMED_2168 IPR036625 E3-binding domain superfamily AMED_2168 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_2168 IPR000089 Biotin/lipoyl attachment AMED_2168 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMED_2168 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMED_2168 IPR014276 2-oxoglutarate dehydrogenase, E2 component AMED_2169 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_2169 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2169 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_2169 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_2169 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMED_2169 IPR023753 FAD/NAD(P)-binding domain AMED_2169 IPR006258 Dihydrolipoamide dehydrogenase AMED_2175 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AMED_2175 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AMED_2175 IPR023042 Peptidase M17, leucine aminopeptidase AMED_2175 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AMED_2179 IPR018300 Aminotransferase, class IV, conserved site AMED_2179 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMED_2179 IPR001544 Aminotransferase class IV AMED_2179 IPR005786 Branched-chain amino acid aminotransferase II AMED_2179 IPR033939 Branched-chain aminotransferase AMED_2180 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic AMED_2180 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal AMED_2180 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AMED_2180 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily AMED_2181 IPR029044 Nucleotide-diphospho-sugar transferases AMED_2181 IPR034683 Cytidylyltransferase IspD/TarI AMED_2181 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AMED_2181 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily AMED_2181 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AMED_2181 IPR026596 Bifunctional enzyme IspD/IspF AMED_2181 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AMED_2181 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMED_2184 IPR028923 SAICAR synthetase/ADE2, N-terminal AMED_2184 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AMED_2185 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_2185 IPR023210 NADP-dependent oxidoreductase domain AMED_2187 IPR021403 Protein of unknown function DUF3043 AMED_2188 IPR035903 HesB-like domain superfamily AMED_2188 IPR016092 FeS cluster insertion protein AMED_2188 IPR000361 FeS cluster biogenesis AMED_2188 IPR017870 FeS cluster insertion, C-terminal, conserved site AMED_2190 IPR029056 Ribokinase-like AMED_2190 IPR011611 Carbohydrate kinase PfkB AMED_2190 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_2192 IPR006426 Asparagine synthase, glutamine-hydrolyzing AMED_2192 IPR033738 Asparagine synthase, N-terminal domain AMED_2192 IPR017932 Glutamine amidotransferase type 2 domain AMED_2192 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_2192 IPR001962 Asparagine synthase AMED_2193 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily AMED_2193 IPR001505 Copper centre Cu(A) AMED_2193 IPR008972 Cupredoxin AMED_2193 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AMED_2194 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria AMED_2195 IPR018062 HTH domain AraC-type, conserved site AMED_2195 IPR018060 DNA binding HTH domain, AraC-type AMED_2195 IPR009057 Homeobox-like domain superfamily AMED_2195 IPR002818 DJ-1/PfpI AMED_2195 IPR029062 Class I glutamine amidotransferase-like AMED_2197 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMED_2197 IPR005940 Anthranilate phosphoribosyl transferase AMED_2197 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMED_2197 IPR000312 Glycosyl transferase, family 3 AMED_2197 IPR017459 Glycosyl transferase family 3, N-terminal domain AMED_2198 IPR011006 CheY-like superfamily AMED_2198 IPR001789 Signal transduction response regulator, receiver domain AMED_2200 IPR024791 Cytochrome c oxidase subunit III AMED_2200 IPR000298 Cytochrome c oxidase subunit III-like AMED_2200 IPR035973 Cytochrome c oxidase subunit III-like superfamily AMED_2200 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AMED_2201 IPR009056 Cytochrome c-like domain AMED_2201 IPR036909 Cytochrome c-like domain superfamily AMED_2201 IPR009152 Cytochrome bc1 complex, cytochrome c subunit AMED_2202 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_2202 IPR014349 Rieske iron-sulphur protein AMED_2202 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_2203 IPR005797 Cytochrome b/b6, N-terminal AMED_2203 IPR016174 Di-haem cytochrome, transmembrane AMED_2203 IPR027387 Cytochrome b/b6-like domain superfamily AMED_2206 IPR012337 Ribonuclease H-like superfamily AMED_2206 IPR000305 GIY-YIG endonuclease AMED_2206 IPR036397 Ribonuclease H superfamily AMED_2206 IPR013520 Exonuclease, RNase T/DNA polymerase III AMED_2206 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AMED_2206 IPR035901 GIY-YIG endonuclease superfamily AMED_2209 IPR038765 Papain-like cysteine peptidase superfamily AMED_2209 IPR000064 Endopeptidase, NLPC/P60 domain AMED_2210 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_2210 IPR001296 Glycosyl transferase, family 1 AMED_2213 IPR036396 Cytochrome P450 superfamily AMED_2213 IPR017972 Cytochrome P450, conserved site AMED_2213 IPR002397 Cytochrome P450, B-class AMED_2213 IPR001128 Cytochrome P450 AMED_2214 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2214 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2214 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2214 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AMED_2214 IPR005814 Aminotransferase class-III AMED_2215 IPR011547 SLC26A/SulP transporter domain AMED_2215 IPR036513 STAS domain superfamily AMED_2215 IPR002645 STAS domain AMED_2215 IPR001902 SLC26A/SulP transporter AMED_2216 IPR002645 STAS domain AMED_2216 IPR001902 SLC26A/SulP transporter AMED_2216 IPR011547 SLC26A/SulP transporter domain AMED_2216 IPR036513 STAS domain superfamily AMED_2217 IPR004472 Dethiobiotin synthase BioD AMED_2217 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2218 IPR010722 Biotin and thiamin synthesis-associated domain AMED_2218 IPR013785 Aldolase-type TIM barrel AMED_2218 IPR024177 Biotin synthase AMED_2218 IPR006638 Elp3/MiaB/NifB AMED_2218 IPR007197 Radical SAM AMED_2218 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AMED_2220 IPR022919 Peptidase M48, protease HtpX, putative AMED_2220 IPR001915 Peptidase M48 AMED_2221 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_2221 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_2221 IPR003111 Lon, substrate-binding domain AMED_2221 IPR003959 ATPase, AAA-type, core AMED_2221 IPR004815 Lon protease, bacterial/eukaryotic-type AMED_2221 IPR008269 Peptidase S16, Lon proteolytic domain AMED_2221 IPR027543 Lon protease, bacterial AMED_2221 IPR027065 Lon protease AMED_2221 IPR015947 PUA-like superfamily AMED_2221 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2221 IPR003593 AAA+ ATPase domain AMED_2221 IPR008268 Peptidase S16, active site AMED_2223 IPR023066 Quinolinate synthase A, type 2 AMED_2223 IPR036094 Quinolinate synthetase A superfamily AMED_2223 IPR003473 Quinolinate synthetase A AMED_2224 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_2224 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2224 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_2224 IPR005288 L-aspartate oxidase AMED_2224 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMED_2224 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMED_2225 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AMED_2225 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AMED_2225 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AMED_2225 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AMED_2225 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AMED_2225 IPR004393 Nicotinate-nucleotide pyrophosphorylase AMED_2225 IPR013785 Aldolase-type TIM barrel AMED_2226 IPR022398 Peptidase S8, subtilisin, His-active site AMED_2226 IPR036852 Peptidase S8/S53 domain superfamily AMED_2226 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_2226 IPR015500 Peptidase S8, subtilisin-related AMED_2226 IPR023834 Type VII secretion system peptidase S8A, mycosin AMED_2226 IPR000209 Peptidase S8/S53 domain AMED_2226 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_2234 IPR025110 AMP-binding enzyme, C-terminal domain AMED_2234 IPR000873 AMP-dependent synthetase/ligase AMED_2234 IPR020845 AMP-binding, conserved site AMED_2234 IPR042099 AMP-dependent synthetase-like superfamily AMED_2238 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2238 IPR023837 EccCb-like, Actinobacteria AMED_2238 IPR023836 EccCa-like, Actinobacteria AMED_2238 IPR003593 AAA+ ATPase domain AMED_2238 IPR002543 FtsK domain AMED_2243 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMED_2243 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMED_2245 IPR001139 Glycoside hydrolase family 30 AMED_2245 IPR013780 Glycosyl hydrolase, all-beta AMED_2245 IPR017853 Glycoside hydrolase superfamily AMED_2245 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain AMED_2247 IPR007795 Type VII secretion system EccB AMED_2248 IPR011006 CheY-like superfamily AMED_2248 IPR000792 Transcription regulator LuxR, C-terminal AMED_2248 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2248 IPR001789 Signal transduction response regulator, receiver domain AMED_2249 IPR011006 CheY-like superfamily AMED_2249 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2249 IPR000792 Transcription regulator LuxR, C-terminal AMED_2249 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2249 IPR001789 Signal transduction response regulator, receiver domain AMED_2250 IPR003010 Carbon-nitrogen hydrolase AMED_2250 IPR001110 Uncharacterised protein family UPF0012, conserved site AMED_2250 IPR036526 Carbon-nitrogen hydrolase superfamily AMED_2251 IPR022695 Histidinol dehydrogenase, monofunctional AMED_2251 IPR012131 Histidinol dehydrogenase AMED_2251 IPR001692 Histidinol dehydrogenase, conserved site AMED_2251 IPR016161 Aldehyde/histidinol dehydrogenase AMED_2252 IPR005861 Histidinol-phosphate aminotransferase family AMED_2252 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2252 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2252 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2252 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMED_2252 IPR004839 Aminotransferase, class I/classII AMED_2253 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_2253 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AMED_2253 IPR000807 Imidazoleglycerol-phosphate dehydratase AMED_2253 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AMED_2254 IPR001279 Metallo-beta-lactamase AMED_2254 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_2257 IPR029058 Alpha/Beta hydrolase fold AMED_2257 IPR000073 Alpha/beta hydrolase fold-1 AMED_2257 IPR000639 Epoxide hydrolase-like AMED_2258 IPR000731 Sterol-sensing domain AMED_2258 IPR004869 Membrane transport protein MMPL domain AMED_2259 IPR009057 Homeobox-like domain superfamily AMED_2259 IPR001647 DNA-binding HTH domain, TetR-type AMED_2259 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_2259 IPR013572 Transcription regulator MAATS, C-terminal AMED_2259 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2260 IPR002745 Phosphotransferase KptA/Tpt1 AMED_2260 IPR022928 RNA 2'-phosphotransferase KptA, putative AMED_2260 IPR042081 RNA 2'-phosphotransferase, C-terminal domain AMED_2260 IPR042080 RNA 2'-phosphotransferase, N-terminal domain AMED_2261 IPR000551 MerR-type HTH domain AMED_2261 IPR015358 Transcription regulator MerR, DNA binding AMED_2261 IPR009061 Putative DNA-binding domain superfamily AMED_2261 IPR010211 Redox-sensitive transcriptional activator SoxR AMED_2262 IPR005474 Transketolase, N-terminal AMED_2262 IPR029061 Thiamin diphosphate-binding fold AMED_2262 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_2263 IPR029061 Thiamin diphosphate-binding fold AMED_2263 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_2263 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_2264 IPR000086 NUDIX hydrolase domain AMED_2264 IPR023781 Nucleoside triphosphatase NudI AMED_2264 IPR020084 NUDIX hydrolase, conserved site AMED_2264 IPR015797 NUDIX hydrolase-like domain superfamily AMED_2264 IPR020476 NUDIX hydrolase AMED_2266 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2266 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2266 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2266 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_2266 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2266 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2266 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2269 IPR017926 Glutamine amidotransferase AMED_2269 IPR010139 Imidazole glycerol phosphate synthase, subunit H AMED_2269 IPR029062 Class I glutamine amidotransferase-like AMED_2270 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AMED_2270 IPR011060 Ribulose-phosphate binding barrel AMED_2270 IPR010188 Bifunctional HisA/TrpF AMED_2270 IPR013785 Aldolase-type TIM barrel AMED_2270 IPR006062 Histidine biosynthesis AMED_2271 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2271 IPR036291 NAD(P)-binding domain superfamily AMED_2271 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_2271 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2280 IPR014322 RNA polymerase sigma-B/F/G type AMED_2280 IPR007627 RNA polymerase sigma-70 region 2 AMED_2280 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2280 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2280 IPR007624 RNA polymerase sigma-70 region 3 AMED_2280 IPR014284 RNA polymerase sigma-70 like domain AMED_2280 IPR013325 RNA polymerase sigma factor, region 2 AMED_2280 IPR007630 RNA polymerase sigma-70 region 4 AMED_2280 IPR000943 RNA polymerase sigma-70 AMED_2281 IPR011042 Six-bladed beta-propeller, TolB-like AMED_2281 IPR003431 Beta propeller phytase AMED_2282 IPR013785 Aldolase-type TIM barrel AMED_2282 IPR004651 Histidine biosynthesis, HisF AMED_2282 IPR006062 Histidine biosynthesis AMED_2282 IPR011060 Ribulose-phosphate binding barrel AMED_2284 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AMED_2284 IPR026660 Phosphoribosyl-AMP cyclohydrolase AMED_2284 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AMED_2291 IPR015890 Chorismate-utilising enzyme, C-terminal AMED_2291 IPR005256 Anthranilate synthase component I, PabB-like AMED_2291 IPR006805 Anthranilate synthase component I, N-terminal AMED_2291 IPR005801 ADC synthase AMED_2291 IPR019999 Anthranilate synthase component I-like AMED_2293 IPR011060 Ribulose-phosphate binding barrel AMED_2293 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AMED_2293 IPR013785 Aldolase-type TIM barrel AMED_2293 IPR013798 Indole-3-glycerol phosphate synthase AMED_2294 IPR006654 Tryptophan synthase, beta chain AMED_2294 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_2294 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_2294 IPR006653 Tryptophan synthase, beta chain, conserved site AMED_2294 IPR023026 Tryptophan synthase beta chain/beta chain-like AMED_2295 IPR018204 Tryptophan synthase, alpha chain, active site AMED_2295 IPR002028 Tryptophan synthase, alpha chain AMED_2295 IPR011060 Ribulose-phosphate binding barrel AMED_2295 IPR013785 Aldolase-type TIM barrel AMED_2296 IPR000551 MerR-type HTH domain AMED_2296 IPR009061 Putative DNA-binding domain superfamily AMED_2300 IPR008147 Glutamine synthetase, beta-Grasp domain AMED_2300 IPR004809 Glutamine synthetase type I AMED_2300 IPR027302 Glutamine synthetase, N-terminal conserved site AMED_2300 IPR027303 Glutamine synthetase, glycine-rich site AMED_2300 IPR008146 Glutamine synthetase, catalytic domain AMED_2300 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_2300 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMED_2300 IPR001637 Glutamine synthetase class-I, adenylation site AMED_2303 IPR036264 Bacterial exopeptidase dimerisation domain AMED_2303 IPR002933 Peptidase M20 AMED_2303 IPR011650 Peptidase M20, dimerisation domain AMED_2303 IPR017439 Amidohydrolase AMED_2304 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt AMED_2305 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2305 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2305 IPR036291 NAD(P)-binding domain superfamily AMED_2306 IPR002932 Glutamate synthase domain AMED_2306 IPR006982 Glutamate synthase, central-N AMED_2306 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AMED_2306 IPR002489 Glutamate synthase, alpha subunit, C-terminal AMED_2306 IPR017932 Glutamine amidotransferase type 2 domain AMED_2306 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_2306 IPR013785 Aldolase-type TIM barrel AMED_2307 IPR023753 FAD/NAD(P)-binding domain AMED_2307 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2307 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 AMED_2307 IPR009051 Alpha-helical ferredoxin AMED_2307 IPR028261 Dihydroprymidine dehydrogenase domain II AMED_2310 IPR029058 Alpha/Beta hydrolase fold AMED_2310 IPR000073 Alpha/beta hydrolase fold-1 AMED_2311 IPR013785 Aldolase-type TIM barrel AMED_2311 IPR002480 DAHP synthetase, class II AMED_2312 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2312 IPR036291 NAD(P)-binding domain superfamily AMED_2312 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2314 IPR014292 Acyltransferase, WS/DGAT/MGAT AMED_2314 IPR009721 O-acyltransferase WSD1, C-terminal AMED_2314 IPR004255 O-acyltransferase, WSD1, N-terminal AMED_2316 IPR001107 Band 7 domain AMED_2316 IPR036013 Band 7/SPFH domain superfamily AMED_2316 IPR031905 Flotillin, C-terminal domain AMED_2316 IPR027705 Flotillin family AMED_2318 IPR008271 Serine/threonine-protein kinase, active site AMED_2318 IPR005543 PASTA domain AMED_2318 IPR000719 Protein kinase domain AMED_2318 IPR011009 Protein kinase-like domain superfamily AMED_2321 IPR036661 Luciferase-like domain superfamily AMED_2321 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_2321 IPR011251 Luciferase-like domain AMED_2322 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head AMED_2322 IPR002060 Squalene/phytoene synthase AMED_2322 IPR008949 Isoprenoid synthase domain superfamily AMED_2322 IPR019845 Squalene/phytoene synthase, conserved site AMED_2323 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2323 IPR014105 Carotenoid/retinoid oxidoreductase AMED_2323 IPR002937 Amine oxidase AMED_2323 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site AMED_2324 IPR000092 Polyprenyl synthetase AMED_2324 IPR008949 Isoprenoid synthase domain superfamily AMED_2324 IPR033749 Polyprenyl synthetase, conserved site AMED_2326 IPR004620 5,10-methylenetetrahydrofolate reductase AMED_2326 IPR003171 Methylenetetrahydrofolate reductase AMED_2326 IPR029041 FAD-linked oxidoreductase-like AMED_2335 IPR023635 Peptide deformylase AMED_2335 IPR036821 Peptide deformylase superfamily AMED_2336 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2336 IPR001650 Helicase, C-terminal AMED_2336 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_2336 IPR011545 DEAD/DEAH box helicase domain AMED_2336 IPR013701 DEAD/H associated AMED_2336 IPR003593 AAA+ ATPase domain AMED_2337 IPR001034 DeoR-type HTH domain AMED_2337 IPR037171 NagB/RpiA transferase-like AMED_2337 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMED_2337 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2337 IPR036390 Winged helix DNA-binding domain superfamily AMED_2337 IPR014036 DeoR C-terminal sensor domain AMED_2338 IPR011701 Major facilitator superfamily AMED_2338 IPR020846 Major facilitator superfamily domain AMED_2338 IPR036259 MFS transporter superfamily AMED_2339 IPR005255 PdxA family AMED_2341 IPR012725 Chaperone DnaK AMED_2341 IPR018181 Heat shock protein 70, conserved site AMED_2341 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMED_2341 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMED_2341 IPR013126 Heat shock protein 70 family AMED_2343 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2343 IPR003593 AAA+ ATPase domain AMED_2343 IPR013765 DNA recombination and repair protein RecA AMED_2343 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface AMED_2343 IPR020584 DNA recombination/repair protein RecA, conserved site AMED_2343 IPR023400 DNA recombination and repair protein RecA, C-terminal AMED_2343 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AMED_2344 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2344 IPR003783 Regulatory protein RecX AMED_2348 IPR031338 KDPG/KHG aldolase, active site 2 AMED_2348 IPR031337 KDPG/KHG aldolase, active site 1 AMED_2348 IPR013785 Aldolase-type TIM barrel AMED_2348 IPR000887 KDPG/KHG aldolase AMED_2349 IPR037237 IlvD/EDD, N-terminal domain AMED_2349 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMED_2349 IPR004786 6-phosphogluconate dehydratase AMED_2349 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMED_2349 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMED_2352 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AMED_2352 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMED_2352 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_2352 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMED_2352 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AMED_2352 IPR011281 Succinate dehydrogenase, flavoprotein subunit AMED_2352 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_2352 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2353 IPR009051 Alpha-helical ferredoxin AMED_2353 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_2353 IPR012675 Beta-grasp domain superfamily AMED_2353 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_2353 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AMED_2353 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AMED_2353 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_2359 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2359 IPR036291 NAD(P)-binding domain superfamily AMED_2359 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_2359 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMED_2360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_2360 IPR035906 MetI-like superfamily AMED_2361 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMED_2361 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_2361 IPR035906 MetI-like superfamily AMED_2362 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_2362 IPR018313 Solute-binding protein family 3, conserved site AMED_2363 IPR003593 AAA+ ATPase domain AMED_2363 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMED_2363 IPR003439 ABC transporter-like AMED_2363 IPR017871 ABC transporter, conserved site AMED_2363 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2364 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_2364 IPR039420 Transcriptional regulatory protein WalR-like AMED_2364 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2364 IPR011006 CheY-like superfamily AMED_2364 IPR001789 Signal transduction response regulator, receiver domain AMED_2365 IPR005467 Histidine kinase domain AMED_2365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_2365 IPR003660 HAMP domain AMED_2365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_2365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_2365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_2365 IPR003594 Histidine kinase/HSP90-like ATPase AMED_2367 IPR036390 Winged helix DNA-binding domain superfamily AMED_2367 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2367 IPR002577 Helix-turn-helix, HxlR type AMED_2371 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMED_2371 IPR005135 Endonuclease/exonuclease/phosphatase AMED_2377 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2377 IPR002938 FAD-binding domain AMED_2378 IPR001647 DNA-binding HTH domain, TetR-type AMED_2378 IPR003012 Tetracycline transcriptional regulator, TetR AMED_2378 IPR009057 Homeobox-like domain superfamily AMED_2378 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_2378 IPR004111 Tetracycline repressor TetR, C-terminal AMED_2378 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2379 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2379 IPR002938 FAD-binding domain AMED_2380 IPR002792 TRAM domain AMED_2380 IPR023404 Radical SAM, alpha/beta horseshoe AMED_2380 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AMED_2380 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMED_2380 IPR013848 Methylthiotransferase, N-terminal AMED_2380 IPR020612 Methylthiotransferase, conserved site AMED_2380 IPR005839 Methylthiotransferase AMED_2380 IPR006638 Elp3/MiaB/NifB AMED_2380 IPR007197 Radical SAM AMED_2381 IPR020612 Methylthiotransferase, conserved site AMED_2381 IPR013848 Methylthiotransferase, N-terminal AMED_2381 IPR006638 Elp3/MiaB/NifB AMED_2381 IPR005839 Methylthiotransferase AMED_2381 IPR007197 Radical SAM AMED_2381 IPR002792 TRAM domain AMED_2381 IPR023404 Radical SAM, alpha/beta horseshoe AMED_2381 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMED_2381 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AMED_2383 IPR007139 Protein of unknown function DUF349 AMED_2384 IPR039657 Dimethylallyltransferase AMED_2384 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2384 IPR018022 IPP transferase AMED_2385 IPR018510 Diaminopimelate epimerase, active site AMED_2385 IPR001653 Diaminopimelate epimerase, DapF AMED_2386 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMED_2386 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_2386 IPR002303 Valine-tRNA ligase AMED_2386 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_2386 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AMED_2386 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMED_2386 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMED_2386 IPR022874 Valine-tRNA ligase, type 2 AMED_2386 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_2389 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2389 IPR030394 HflX-type guanine nucleotide-binding (G) domain AMED_2389 IPR025121 GTPase HflX, N-terminal AMED_2389 IPR042108 GTPase HflX, N-terminal domain superfamily AMED_2389 IPR016496 GTPase HflX AMED_2389 IPR006073 GTP binding domain AMED_2389 IPR032305 GTP-binding protein, middle domain AMED_2391 IPR036390 Winged helix DNA-binding domain superfamily AMED_2391 IPR006199 LexA repressor, DNA-binding domain AMED_2391 IPR006197 Peptidase S24, LexA-like AMED_2391 IPR015927 Peptidase S24/S26A/S26B/S26C AMED_2391 IPR039418 LexA-like AMED_2391 IPR036286 LexA/Signal peptidase-like superfamily AMED_2391 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2391 IPR006200 Transcription regulator LexA AMED_2393 IPR003796 Ribonucleotide reductase regulator NrdR-like AMED_2393 IPR005144 ATP-cone domain AMED_2394 IPR000788 Ribonucleotide reductase large subunit, C-terminal AMED_2394 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent AMED_2394 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain AMED_2398 IPR023048 NADH-azoreductase, FMN-dependent AMED_2398 IPR029039 Flavoprotein-like superfamily AMED_2398 IPR003680 Flavodoxin-like fold AMED_2400 IPR002470 Peptidase S9A, prolyl oligopeptidase AMED_2400 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMED_2400 IPR029058 Alpha/Beta hydrolase fold AMED_2400 IPR023302 Peptidase S9A, N-terminal domain AMED_2403 IPR004839 Aminotransferase, class I/classII AMED_2403 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2403 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2403 IPR036390 Winged helix DNA-binding domain superfamily AMED_2403 IPR000524 Transcription regulator HTH, GntR AMED_2403 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2407 IPR029058 Alpha/Beta hydrolase fold AMED_2407 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_2407 IPR005674 CocE/Serine esterase AMED_2407 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_2407 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase AMED_2407 IPR008979 Galactose-binding-like domain superfamily AMED_2408 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_2408 IPR003848 Domain of unknown function DUF218 AMED_2409 IPR016166 FAD-binding domain, PCMH-type AMED_2409 IPR012951 Berberine/berberine-like AMED_2409 IPR036318 FAD-binding, type PCMH-like superfamily AMED_2409 IPR006093 Oxygen oxidoreductase covalent FAD-binding site AMED_2409 IPR006094 FAD linked oxidase, N-terminal AMED_2409 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_2409 IPR016164 FAD-linked oxidase-like, C-terminal AMED_2409 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_2410 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2410 IPR011006 CheY-like superfamily AMED_2410 IPR000792 Transcription regulator LuxR, C-terminal AMED_2410 IPR001789 Signal transduction response regulator, receiver domain AMED_2411 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_2411 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_2411 IPR003594 Histidine kinase/HSP90-like ATPase AMED_2414 IPR005886 UDP-glucose 4-epimerase AMED_2414 IPR036291 NAD(P)-binding domain superfamily AMED_2414 IPR001509 NAD-dependent epimerase/dehydratase AMED_2415 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_2415 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_2415 IPR006206 Mevalonate/galactokinase AMED_2415 IPR006203 GHMP kinase, ATP-binding, conserved site AMED_2415 IPR006204 GHMP kinase N-terminal domain AMED_2415 IPR013750 GHMP kinase, C-terminal domain AMED_2415 IPR019539 Galactokinase galactose-binding domain AMED_2415 IPR036554 GHMP kinase, C-terminal domain superfamily AMED_2415 IPR022963 Galactokinase, bacterial AMED_2415 IPR000705 Galactokinase AMED_2415 IPR019741 Galactokinase, conserved site AMED_2416 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2416 IPR008988 Transcriptional repressor, C-terminal AMED_2416 IPR022689 Iron dependent repressor AMED_2416 IPR022687 DTXR-type HTH domain AMED_2416 IPR038157 Ferrous iron transporter, core domain AMED_2416 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily AMED_2416 IPR001367 Iron dependent repressor, metal binding and dimerisation domain AMED_2416 IPR007167 Ferrous iron transporter FeoA domain AMED_2416 IPR040767 Diphteria toxin repressor, SH3 domain AMED_2416 IPR036390 Winged helix DNA-binding domain superfamily AMED_2417 IPR001763 Rhodanese-like domain AMED_2417 IPR036873 Rhodanese-like domain superfamily AMED_2418 IPR000286 Histone deacetylase family AMED_2418 IPR023801 Histone deacetylase domain AMED_2418 IPR023696 Ureohydrolase domain superfamily AMED_2418 IPR037138 Histone deacetylase domain superfamily AMED_2418 IPR003085 Acetoin utilization protein AcuC AMED_2420 IPR012338 Beta-lactamase/transpeptidase-like AMED_2420 IPR001466 Beta-lactamase-related AMED_2421 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2421 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2421 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2421 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2421 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2422 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2422 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2422 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2422 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2422 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2422 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2424 IPR036291 NAD(P)-binding domain superfamily AMED_2424 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2424 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2425 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2425 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2425 IPR036291 NAD(P)-binding domain superfamily AMED_2426 IPR030802 ABC transporter permease MalE AMED_2426 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMED_2427 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMED_2427 IPR030802 ABC transporter permease MalE AMED_2437 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2437 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2437 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2437 IPR024551 Aminotransferase, putative AMED_2439 IPR002938 FAD-binding domain AMED_2439 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2440 IPR028082 Periplasmic binding protein-like I AMED_2440 IPR000843 LacI-type HTH domain AMED_2440 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_2442 IPR035906 MetI-like superfamily AMED_2442 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_2443 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_2443 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE AMED_2443 IPR035906 MetI-like superfamily AMED_2444 IPR017853 Glycoside hydrolase superfamily AMED_2444 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMED_2444 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase AMED_2444 IPR018120 Glycoside hydrolase family 1, active site AMED_2444 IPR001360 Glycoside hydrolase family 1 AMED_2445 IPR020845 AMP-binding, conserved site AMED_2445 IPR000873 AMP-dependent synthetase/ligase AMED_2445 IPR042099 AMP-dependent synthetase-like superfamily AMED_2449 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2449 IPR008978 HSP20-like chaperone AMED_2449 IPR016300 Arsenical pump ATPase, ArsA/GET3 AMED_2449 IPR040612 ArsA, HSP20-like domain AMED_2449 IPR025723 Anion-transporting ATPase-like domain AMED_2451 IPR000600 ROK family AMED_2451 IPR004654 Glucokinase ROK AMED_2454 IPR011793 Putative glutamate--cysteine ligase YbdK AMED_2454 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_2454 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_2456 IPR029058 Alpha/Beta hydrolase fold AMED_2456 IPR012354 Esterase/lipase AMED_2456 IPR022742 Serine aminopeptidase, S33 AMED_2457 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AMED_2457 IPR002123 Phospholipid/glycerol acyltransferase AMED_2458 IPR030853 3-5 exoribonuclease, actinobacteria AMED_2458 IPR012337 Ribonuclease H-like superfamily AMED_2458 IPR033390 3'-5' exoribonuclease Rv2179c-like domain AMED_2458 IPR036397 Ribonuclease H superfamily AMED_2459 IPR013785 Aldolase-type TIM barrel AMED_2459 IPR006218 DAHP synthetase I/KDSA AMED_2459 IPR006219 DHAP synthase, class 1 AMED_2460 IPR000023 Phosphofructokinase domain AMED_2460 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type AMED_2460 IPR022953 ATP-dependent 6-phosphofructokinase AMED_2460 IPR015912 Phosphofructokinase, conserved site AMED_2460 IPR012829 Phosphofructokinase, mixed-substrate PFK group III AMED_2460 IPR035966 Phosphofructokinase superfamily AMED_2462 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2462 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2462 IPR013325 RNA polymerase sigma factor, region 2 AMED_2462 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_2462 IPR014284 RNA polymerase sigma-70 like domain AMED_2462 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_2462 IPR007627 RNA polymerase sigma-70 region 2 AMED_2462 IPR039425 RNA polymerase sigma-70 like AMED_2463 IPR005921 Histidine ammonia-lyase AMED_2463 IPR008948 L-Aspartase-like AMED_2463 IPR024083 Fumarase/histidase, N-terminal AMED_2463 IPR001106 Aromatic amino acid lyase AMED_2463 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AMED_2465 IPR002577 Helix-turn-helix, HxlR type AMED_2465 IPR036390 Winged helix DNA-binding domain superfamily AMED_2465 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2466 IPR011991 ArsR-like helix-turn-helix domain AMED_2466 IPR036390 Winged helix DNA-binding domain superfamily AMED_2466 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2466 IPR001845 HTH ArsR-type DNA-binding domain AMED_2467 IPR011583 Chitinase II AMED_2467 IPR029070 Chitinase insertion domain superfamily AMED_2467 IPR003961 Fibronectin type III AMED_2467 IPR036116 Fibronectin type III superfamily AMED_2467 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_2467 IPR001579 Glycoside hydrolase, chitinase active site AMED_2467 IPR017853 Glycoside hydrolase superfamily AMED_2467 IPR018366 Carbohydrate-binding type-2, conserved site AMED_2467 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_2467 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_2467 IPR001919 Carbohydrate-binding type-2 domain AMED_2467 IPR013783 Immunoglobulin-like fold AMED_2469 IPR011037 Pyruvate kinase-like, insert domain superfamily AMED_2469 IPR015795 Pyruvate kinase, C-terminal AMED_2469 IPR015793 Pyruvate kinase, barrel AMED_2469 IPR018209 Pyruvate kinase, active site AMED_2469 IPR040442 Pyruvate kinase-like domain superfamily AMED_2469 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_2469 IPR001697 Pyruvate kinase AMED_2469 IPR036918 Pyruvate kinase, C-terminal domain superfamily AMED_2469 IPR015806 Pyruvate kinase, insert domain superfamily AMED_2470 IPR003703 Acyl-CoA thioesterase AMED_2470 IPR029069 HotDog domain superfamily AMED_2474 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2474 IPR001789 Signal transduction response regulator, receiver domain AMED_2474 IPR011006 CheY-like superfamily AMED_2474 IPR000792 Transcription regulator LuxR, C-terminal AMED_2475 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_2475 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_2475 IPR016161 Aldehyde/histidinol dehydrogenase AMED_2475 IPR015590 Aldehyde dehydrogenase domain AMED_2475 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_2477 IPR001647 DNA-binding HTH domain, TetR-type AMED_2477 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2477 IPR009057 Homeobox-like domain superfamily AMED_2478 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2478 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2478 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2478 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2478 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2478 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2478 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_2479 IPR003673 CoA-transferase family III AMED_2479 IPR023606 CoA-transferase family III domain superfamily AMED_2481 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_2481 IPR029045 ClpP/crotonase-like domain superfamily AMED_2481 IPR001753 Enoyl-CoA hydratase/isomerase AMED_2481 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_2487 IPR011701 Major facilitator superfamily AMED_2487 IPR020846 Major facilitator superfamily domain AMED_2487 IPR036259 MFS transporter superfamily AMED_2487 IPR005829 Sugar transporter, conserved site AMED_2488 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_2488 IPR023769 Nucleoid occlusion factor SlmA AMED_2488 IPR001647 DNA-binding HTH domain, TetR-type AMED_2488 IPR009057 Homeobox-like domain superfamily AMED_2489 IPR001734 Sodium/solute symporter AMED_2489 IPR038377 Sodium/glucose symporter superfamily AMED_2492 IPR004942 Roadblock/LAMTOR2 domain AMED_2498 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AMED_2498 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic AMED_2498 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic AMED_2498 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2498 IPR033669 Fused isobutyryl-CoA mutase AMED_2498 IPR036724 Cobalamin-binding domain superfamily AMED_2498 IPR006158 Cobalamin (vitamin B12)-binding domain AMED_2499 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2499 IPR025714 Methyltransferase domain AMED_2500 IPR011251 Luciferase-like domain AMED_2500 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent AMED_2500 IPR036661 Luciferase-like domain superfamily AMED_2501 IPR001647 DNA-binding HTH domain, TetR-type AMED_2501 IPR009057 Homeobox-like domain superfamily AMED_2501 IPR041642 HTH-type transcriptional repressor KstR, C-terminal AMED_2502 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2502 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2502 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2502 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2502 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2502 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2503 IPR000330 SNF2-related, N-terminal domain AMED_2503 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2503 IPR022138 Helicase SWF/SNF-related AMED_2503 IPR001650 Helicase, C-terminal AMED_2503 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_2503 IPR038718 SNF2-like, N-terminal domain superfamily AMED_2505 IPR013094 Alpha/beta hydrolase fold-3 AMED_2505 IPR029058 Alpha/Beta hydrolase fold AMED_2506 IPR014292 Acyltransferase, WS/DGAT/MGAT AMED_2506 IPR009721 O-acyltransferase WSD1, C-terminal AMED_2506 IPR004255 O-acyltransferase, WSD1, N-terminal AMED_2507 IPR004378 F420H(2)-dependent quinone reductase AMED_2507 IPR012349 FMN-binding split barrel AMED_2508 IPR029058 Alpha/Beta hydrolase fold AMED_2508 IPR000073 Alpha/beta hydrolase fold-1 AMED_2509 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2509 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2509 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2509 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2509 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2510 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2510 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2511 IPR029069 HotDog domain superfamily AMED_2511 IPR039569 N-terminal of MaoC-like dehydratase AMED_2511 IPR016709 Uncharacterised protein family UPF0336 AMED_2515 IPR023468 Riboflavin kinase AMED_2515 IPR002606 Riboflavin kinase, bacterial AMED_2515 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AMED_2515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_2515 IPR023465 Riboflavin kinase domain superfamily AMED_2515 IPR015864 FAD synthetase AMED_2516 IPR002539 MaoC-like dehydratase domain AMED_2516 IPR029069 HotDog domain superfamily AMED_2517 IPR012675 Beta-grasp domain superfamily AMED_2517 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_2517 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_2517 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_2517 IPR017938 Riboflavin synthase-like beta-barrel AMED_2517 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_2517 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_2517 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_2517 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_2517 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_2519 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_2519 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_2520 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_2520 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_2520 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2521 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_2521 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2521 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_2522 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMED_2522 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2522 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2522 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2522 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2523 IPR029058 Alpha/Beta hydrolase fold AMED_2523 IPR000073 Alpha/beta hydrolase fold-1 AMED_2523 IPR000639 Epoxide hydrolase-like AMED_2524 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II AMED_2524 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_2524 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_2524 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_2525 IPR002563 Flavin reductase like domain AMED_2525 IPR012349 FMN-binding split barrel AMED_2528 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_2528 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D AMED_2528 IPR001279 Metallo-beta-lactamase AMED_2529 IPR005804 Fatty acid desaturase domain AMED_2530 IPR003593 AAA+ ATPase domain AMED_2530 IPR017871 ABC transporter, conserved site AMED_2530 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2530 IPR004602 UvrABC system subunit A AMED_2530 IPR003439 ABC transporter-like AMED_2530 IPR041552 UvrA DNA-binding domain AMED_2530 IPR041102 UvrA, interaction domain AMED_2534 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2534 IPR036390 Winged helix DNA-binding domain superfamily AMED_2534 IPR000847 Transcription regulator HTH, LysR AMED_2534 IPR005119 LysR, substrate-binding AMED_2535 IPR020846 Major facilitator superfamily domain AMED_2535 IPR036259 MFS transporter superfamily AMED_2535 IPR011701 Major facilitator superfamily AMED_2536 IPR023753 FAD/NAD(P)-binding domain AMED_2536 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2536 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_2536 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit AMED_2536 IPR028202 Reductase, C-terminal AMED_2541 IPR013325 RNA polymerase sigma factor, region 2 AMED_2541 IPR007630 RNA polymerase sigma-70 region 4 AMED_2541 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2541 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2541 IPR007627 RNA polymerase sigma-70 region 2 AMED_2541 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_2541 IPR039425 RNA polymerase sigma-70 like AMED_2541 IPR014284 RNA polymerase sigma-70 like domain AMED_2546 IPR011650 Peptidase M20, dimerisation domain AMED_2546 IPR017439 Amidohydrolase AMED_2546 IPR036264 Bacterial exopeptidase dimerisation domain AMED_2546 IPR002933 Peptidase M20 AMED_2548 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_2548 IPR032466 Metal-dependent hydrolase AMED_2548 IPR006680 Amidohydrolase-related AMED_2548 IPR005920 Imidazolonepropionase AMED_2549 IPR029058 Alpha/Beta hydrolase fold AMED_2549 IPR000073 Alpha/beta hydrolase fold-1 AMED_2550 IPR020613 Thiolase, conserved site AMED_2550 IPR002155 Thiolase AMED_2550 IPR020617 Thiolase, C-terminal AMED_2550 IPR016039 Thiolase-like AMED_2550 IPR020616 Thiolase, N-terminal AMED_2551 IPR001128 Cytochrome P450 AMED_2551 IPR036396 Cytochrome P450 superfamily AMED_2551 IPR002397 Cytochrome P450, B-class AMED_2554 IPR005274 Inner membrane protein YhjD AMED_2554 IPR017039 Virulence factor BrkB AMED_2558 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_2558 IPR001753 Enoyl-CoA hydratase/isomerase AMED_2558 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_2558 IPR029045 ClpP/crotonase-like domain superfamily AMED_2558 IPR022852 Carnitinyl-CoA dehydratase AMED_2559 IPR025110 AMP-binding enzyme, C-terminal domain AMED_2559 IPR020845 AMP-binding, conserved site AMED_2559 IPR042099 AMP-dependent synthetase-like superfamily AMED_2559 IPR000873 AMP-dependent synthetase/ligase AMED_2560 IPR004136 Nitronate monooxygenase AMED_2560 IPR013785 Aldolase-type TIM barrel AMED_2561 IPR033116 Serine proteases, trypsin family, serine active site AMED_2561 IPR018114 Serine proteases, trypsin family, histidine active site AMED_2561 IPR001314 Peptidase S1A, chymotrypsin family AMED_2561 IPR009003 Peptidase S1, PA clan AMED_2561 IPR001254 Serine proteases, trypsin domain AMED_2562 IPR002293 Amino acid/polyamine transporter I AMED_2563 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_2563 IPR000524 Transcription regulator HTH, GntR AMED_2563 IPR011663 UbiC transcription regulator-associated AMED_2563 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2563 IPR036390 Winged helix DNA-binding domain superfamily AMED_2566 IPR036908 RlpA-like domain superfamily AMED_2567 IPR011167 Iron-dependent fumarate hydratase AMED_2567 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AMED_2567 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily AMED_2567 IPR020557 Fumarate lyase, conserved site AMED_2567 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AMED_2568 IPR007624 RNA polymerase sigma-70 region 3 AMED_2568 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2568 IPR013325 RNA polymerase sigma factor, region 2 AMED_2568 IPR007627 RNA polymerase sigma-70 region 2 AMED_2568 IPR009042 RNA polymerase sigma-70 region 1.2 AMED_2568 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2568 IPR014284 RNA polymerase sigma-70 like domain AMED_2568 IPR000943 RNA polymerase sigma-70 AMED_2568 IPR007630 RNA polymerase sigma-70 region 4 AMED_2569 IPR003732 D-aminoacyl-tRNA deacylase DTD AMED_2569 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMED_2570 IPR007848 Methyltransferase small domain AMED_2570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2570 IPR004556 Methyltransferase HemK-like AMED_2570 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMED_2570 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMED_2570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMED_2571 IPR036264 Bacterial exopeptidase dimerisation domain AMED_2571 IPR017439 Amidohydrolase AMED_2571 IPR011650 Peptidase M20, dimerisation domain AMED_2571 IPR002933 Peptidase M20 AMED_2573 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_2573 IPR011611 Carbohydrate kinase PfkB AMED_2573 IPR002139 Ribokinase/fructokinase AMED_2573 IPR029056 Ribokinase-like AMED_2574 IPR007342 Pseudouridine-5'-phosphate glycosidase AMED_2574 IPR022830 Indigoidine synthase A-like AMED_2579 IPR001036 Acriflavin resistance protein AMED_2579 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMED_2581 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2581 IPR006935 Helicase/UvrB, N-terminal AMED_2581 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_2582 IPR028082 Periplasmic binding protein-like I AMED_2582 IPR025997 Periplasmic binding protein AMED_2582 IPR013456 D-xylose ABC transporter, substrate-binding protein AMED_2583 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2583 IPR003439 ABC transporter-like AMED_2583 IPR003593 AAA+ ATPase domain AMED_2584 IPR001851 ABC transporter, permease AMED_2588 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_2588 IPR027302 Glutamine synthetase, N-terminal conserved site AMED_2588 IPR004809 Glutamine synthetase type I AMED_2588 IPR027303 Glutamine synthetase, glycine-rich site AMED_2588 IPR008146 Glutamine synthetase, catalytic domain AMED_2588 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMED_2588 IPR008147 Glutamine synthetase, beta-Grasp domain AMED_2590 IPR002293 Amino acid/polyamine transporter I AMED_2590 IPR004758 Amino acid transporter AMED_2591 IPR003385 Glycoside hydrolase, family 77 AMED_2591 IPR017853 Glycoside hydrolase superfamily AMED_2592 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2592 IPR013780 Glycosyl hydrolase, all-beta AMED_2592 IPR013783 Immunoglobulin-like fold AMED_2592 IPR014756 Immunoglobulin E-set AMED_2592 IPR004193 Glycoside hydrolase, family 13, N-terminal AMED_2592 IPR017853 Glycoside hydrolase superfamily AMED_2592 IPR011837 Glycogen debranching enzyme, GlgX type AMED_2593 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2593 IPR017853 Glycoside hydrolase superfamily AMED_2593 IPR012767 Maltooligosyl trehalose synthase AMED_2594 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2594 IPR017853 Glycoside hydrolase superfamily AMED_2594 IPR004193 Glycoside hydrolase, family 13, N-terminal AMED_2594 IPR012768 Malto-oligosyltrehalose trehalohydrolase AMED_2594 IPR013783 Immunoglobulin-like fold AMED_2594 IPR014756 Immunoglobulin E-set AMED_2595 IPR014756 Immunoglobulin E-set AMED_2595 IPR004193 Glycoside hydrolase, family 13, N-terminal AMED_2595 IPR013780 Glycosyl hydrolase, all-beta AMED_2595 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2595 IPR017853 Glycoside hydrolase superfamily AMED_2595 IPR013783 Immunoglobulin-like fold AMED_2595 IPR011837 Glycogen debranching enzyme, GlgX type AMED_2596 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S AMED_2596 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2596 IPR013783 Immunoglobulin-like fold AMED_2596 IPR017853 Glycoside hydrolase superfamily AMED_2596 IPR013780 Glycosyl hydrolase, all-beta AMED_2596 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase AMED_2597 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2597 IPR017853 Glycoside hydrolase superfamily AMED_2597 IPR032091 Maltogenic Amylase, C-terminal AMED_2597 IPR012810 Trehalose synthase/alpha-amylase, N-terminal AMED_2597 IPR013780 Glycosyl hydrolase, all-beta AMED_2598 IPR040999 Maltokinase N-terminal cap domain AMED_2598 IPR011009 Protein kinase-like domain superfamily AMED_2599 IPR013780 Glycosyl hydrolase, all-beta AMED_2599 IPR017853 Glycoside hydrolase superfamily AMED_2599 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB AMED_2599 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_2599 IPR014756 Immunoglobulin E-set AMED_2599 IPR013783 Immunoglobulin-like fold AMED_2599 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta AMED_2599 IPR037439 1,4-alpha-glucan-branching enzyme AMED_2599 IPR004193 Glycoside hydrolase, family 13, N-terminal AMED_2601 IPR007627 RNA polymerase sigma-70 region 2 AMED_2601 IPR014284 RNA polymerase sigma-70 like domain AMED_2601 IPR009042 RNA polymerase sigma-70 region 1.2 AMED_2601 IPR000943 RNA polymerase sigma-70 AMED_2601 IPR013325 RNA polymerase sigma factor, region 2 AMED_2601 IPR007630 RNA polymerase sigma-70 region 4 AMED_2601 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2601 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2601 IPR007624 RNA polymerase sigma-70 region 3 AMED_2601 IPR028630 RNA polymerase sigma factor RpoD AMED_2601 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AMED_2602 IPR000600 ROK family AMED_2603 IPR020550 Inositol monophosphatase, conserved site AMED_2603 IPR020583 Inositol monophosphatase, metal-binding site AMED_2603 IPR000760 Inositol monophosphatase-like AMED_2607 IPR029054 dUTPase-like AMED_2607 IPR033704 dUTPase, trimeric AMED_2607 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AMED_2607 IPR036157 dUTPase-like superfamily AMED_2612 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMED_2612 IPR003148 Regulator of K+ conductance, N-terminal AMED_2612 IPR006036 Potassium uptake protein TrkA AMED_2612 IPR006037 Regulator of K+ conductance, C-terminal AMED_2612 IPR036291 NAD(P)-binding domain superfamily AMED_2613 IPR036291 NAD(P)-binding domain superfamily AMED_2613 IPR006037 Regulator of K+ conductance, C-terminal AMED_2613 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMED_2613 IPR006036 Potassium uptake protein TrkA AMED_2613 IPR003148 Regulator of K+ conductance, N-terminal AMED_2614 IPR002293 Amino acid/polyamine transporter I AMED_2615 IPR002792 TRAM domain AMED_2615 IPR010280 (Uracil-5)-methyltransferase family AMED_2615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2615 IPR012340 Nucleic acid-binding, OB-fold AMED_2615 IPR030391 RNA methyltransferase TrmA, conserved site AMED_2617 IPR011264 Betaine aldehyde dehydrogenase AMED_2617 IPR015590 Aldehyde dehydrogenase domain AMED_2617 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_2617 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_2617 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_2617 IPR016161 Aldehyde/histidinol dehydrogenase AMED_2617 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_2618 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_2618 IPR005477 Deoxyxylulose-5-phosphate synthase AMED_2618 IPR020826 Transketolase binding site AMED_2618 IPR005474 Transketolase, N-terminal AMED_2618 IPR033248 Transketolase, C-terminal domain AMED_2618 IPR029061 Thiamin diphosphate-binding fold AMED_2618 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_2619 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_2619 IPR023588 Transcription regulator HTH, PurR AMED_2619 IPR028082 Periplasmic binding protein-like I AMED_2619 IPR000843 LacI-type HTH domain AMED_2620 IPR017749 1-pyrroline dehydrogenase AMED_2620 IPR015657 Aminobutyraldehyde dehydrogenase AMED_2620 IPR015590 Aldehyde dehydrogenase domain AMED_2620 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_2620 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_2620 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_2620 IPR016161 Aldehyde/histidinol dehydrogenase AMED_2621 IPR029061 Thiamin diphosphate-binding fold AMED_2621 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_2621 IPR000399 TPP-binding enzyme, conserved site AMED_2621 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_2621 IPR012846 Acetolactate synthase, large subunit, biosynthetic AMED_2621 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_2621 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_2621 IPR039368 Acetolactate synthase large subunit, TPP binding domain AMED_2622 IPR023696 Ureohydrolase domain superfamily AMED_2622 IPR006035 Ureohydrolase AMED_2622 IPR005925 Agmatinase-related AMED_2622 IPR020855 Ureohydrolase, manganese-binding site AMED_2624 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_2624 IPR025736 PucR C-terminal helix-turn-helix domain AMED_2625 IPR039420 Transcriptional regulatory protein WalR-like AMED_2625 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2625 IPR011006 CheY-like superfamily AMED_2625 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_2625 IPR001789 Signal transduction response regulator, receiver domain AMED_2626 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_2626 IPR003660 HAMP domain AMED_2626 IPR003594 Histidine kinase/HSP90-like ATPase AMED_2626 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_2626 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_2626 IPR005467 Histidine kinase domain AMED_2626 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_2627 IPR029058 Alpha/Beta hydrolase fold AMED_2627 IPR013094 Alpha/beta hydrolase fold-3 AMED_2630 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_2630 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_2630 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_2630 IPR029045 ClpP/crotonase-like domain superfamily AMED_2630 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_2630 IPR001753 Enoyl-CoA hydratase/isomerase AMED_2630 IPR012802 Fatty oxidation complex, alpha subunit FadJ AMED_2630 IPR036291 NAD(P)-binding domain superfamily AMED_2631 IPR012793 Beta-ketoadipyl CoA thiolase AMED_2631 IPR016039 Thiolase-like AMED_2631 IPR020616 Thiolase, N-terminal AMED_2631 IPR020613 Thiolase, conserved site AMED_2631 IPR020617 Thiolase, C-terminal AMED_2631 IPR020610 Thiolase, active site AMED_2631 IPR002155 Thiolase AMED_2631 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_2634 IPR036928 Amidase signature (AS) superfamily AMED_2634 IPR023631 Amidase signature domain AMED_2634 IPR014085 Allophanate hydrolase AMED_2635 IPR001882 Biotin-binding site AMED_2635 IPR005481 Biotin carboxylase-like, N-terminal domain AMED_2635 IPR011761 ATP-grasp fold AMED_2635 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_2635 IPR016185 Pre-ATP-grasp domain superfamily AMED_2635 IPR000089 Biotin/lipoyl attachment AMED_2635 IPR011053 Single hybrid motif AMED_2635 IPR011764 Biotin carboxylation domain AMED_2635 IPR011054 Rudiment single hybrid motif AMED_2635 IPR005482 Biotin carboxylase, C-terminal AMED_2638 IPR004758 Amino acid transporter AMED_2638 IPR002293 Amino acid/polyamine transporter I AMED_2639 IPR009057 Homeobox-like domain superfamily AMED_2639 IPR001647 DNA-binding HTH domain, TetR-type AMED_2639 IPR004111 Tetracycline repressor TetR, C-terminal AMED_2639 IPR003012 Tetracycline transcriptional regulator, TetR AMED_2639 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_2639 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2641 IPR001789 Signal transduction response regulator, receiver domain AMED_2641 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2641 IPR000792 Transcription regulator LuxR, C-terminal AMED_2641 IPR011006 CheY-like superfamily AMED_2643 IPR006361 Uroporphyrinogen decarboxylase HemE AMED_2643 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AMED_2643 IPR038071 UROD/MetE-like superfamily AMED_2644 IPR004572 Protoporphyrinogen oxidase AMED_2644 IPR002937 Amine oxidase AMED_2644 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2645 IPR011008 Dimeric alpha-beta barrel AMED_2645 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase AMED_2646 IPR003673 CoA-transferase family III AMED_2646 IPR023606 CoA-transferase family III domain superfamily AMED_2648 IPR007801 Uncharacterised protein family UPF0276 AMED_2648 IPR036237 Xylose isomerase-like superfamily AMED_2651 IPR028427 Peptide methionine sulfoxide reductase AMED_2651 IPR011057 Mss4-like superfamily AMED_2651 IPR002579 Peptide methionine sulphoxide reductase MrsB AMED_2653 IPR005543 PASTA domain AMED_2653 IPR000719 Protein kinase domain AMED_2653 IPR011009 Protein kinase-like domain superfamily AMED_2653 IPR008271 Serine/threonine-protein kinase, active site AMED_2654 IPR015414 Transmembrane protein TMEM64 AMED_2654 IPR032816 SNARE associated Golgi protein AMED_2655 IPR014143 DNA ligase D AMED_2655 IPR012310 DNA ligase, ATP-dependent, central AMED_2655 IPR014146 DNA ligase D, ligase domain AMED_2655 IPR033651 LigD polymerase domain, PaeLigD-type AMED_2655 IPR012340 Nucleic acid-binding, OB-fold AMED_2655 IPR014145 DNA ligase D, polymerase domain AMED_2655 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_2655 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_2657 IPR011251 Luciferase-like domain AMED_2657 IPR036661 Luciferase-like domain superfamily AMED_2657 IPR019949 Luciferase family oxidoreductase, group 1 AMED_2658 IPR022967 RNA-binding domain, S1 AMED_2658 IPR012340 Nucleic acid-binding, OB-fold AMED_2658 IPR003029 S1 domain AMED_2660 IPR041522 CdaR, GGDEF-like domain AMED_2660 IPR029016 GAF-like domain superfamily AMED_2660 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal AMED_2660 IPR025736 PucR C-terminal helix-turn-helix domain AMED_2660 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_2661 IPR016161 Aldehyde/histidinol dehydrogenase AMED_2661 IPR015590 Aldehyde dehydrogenase domain AMED_2661 IPR005932 1-pyrroline-5-carboxylate dehydrogenase AMED_2661 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_2661 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_2661 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_2662 IPR002872 Proline dehydrogenase domain AMED_2662 IPR029041 FAD-linked oxidoreductase-like AMED_2662 IPR015659 Proline oxidase family AMED_2662 IPR008219 Proline dehydrogenase, bacteria and archaea AMED_2663 IPR005746 Thioredoxin AMED_2663 IPR036249 Thioredoxin-like superfamily AMED_2663 IPR017937 Thioredoxin, conserved site AMED_2663 IPR013766 Thioredoxin domain AMED_2664 IPR020311 Uncharacterised protein family, Rv0898c AMED_2665 IPR011008 Dimeric alpha-beta barrel AMED_2665 IPR005545 YCII-related AMED_2667 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_2667 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2667 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2667 IPR013325 RNA polymerase sigma factor, region 2 AMED_2667 IPR007627 RNA polymerase sigma-70 region 2 AMED_2667 IPR014284 RNA polymerase sigma-70 like domain AMED_2667 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_2669 IPR012340 Nucleic acid-binding, OB-fold AMED_2669 IPR012310 DNA ligase, ATP-dependent, central AMED_2669 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_2674 IPR005531 Alkaline shock protein Asp23 AMED_2676 IPR014286 RNA polymerase sigma-70 RpoE type AMED_2676 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_2676 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2676 IPR007627 RNA polymerase sigma-70 region 2 AMED_2676 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_2676 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2676 IPR013325 RNA polymerase sigma factor, region 2 AMED_2676 IPR039425 RNA polymerase sigma-70 like AMED_2676 IPR014284 RNA polymerase sigma-70 like domain AMED_2680 IPR006076 FAD dependent oxidoreductase AMED_2680 IPR023209 D-amino-acid oxidase AMED_2681 IPR013780 Glycosyl hydrolase, all-beta AMED_2681 IPR013529 Glycoside hydrolase, family 42, N-terminal AMED_2681 IPR003476 Glycoside hydrolase, family 42 AMED_2681 IPR029062 Class I glutamine amidotransferase-like AMED_2681 IPR013738 Beta-galactosidase trimerisation AMED_2681 IPR017853 Glycoside hydrolase superfamily AMED_2681 IPR013739 Beta-galactosidase C-terminal AMED_2683 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2683 IPR005814 Aminotransferase class-III AMED_2683 IPR010164 Ornithine aminotransferase AMED_2683 IPR034757 Ornithine aminotransferase, bacterial type AMED_2683 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2683 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2684 IPR036390 Winged helix DNA-binding domain superfamily AMED_2684 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2684 IPR011991 ArsR-like helix-turn-helix domain AMED_2684 IPR001845 HTH ArsR-type DNA-binding domain AMED_2686 IPR022488 Polyphosphate kinase-2-related AMED_2686 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 AMED_2686 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2686 IPR016898 Polyphosphate kinase 2 AMED_2687 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMED_2687 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMED_2687 IPR029058 Alpha/Beta hydrolase fold AMED_2687 IPR002469 Dipeptidylpeptidase IV, N-terminal domain AMED_2689 IPR003691 Putative fluoride ion transporter CrcB AMED_2690 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMED_2690 IPR003793 Domain of unknown function DUF190 AMED_2690 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMED_2691 IPR003691 Putative fluoride ion transporter CrcB AMED_2692 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2692 IPR021115 Pyridoxal-phosphate binding site AMED_2692 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2692 IPR002129 Pyridoxal phosphate-dependent decarboxylase AMED_2693 IPR031043 Putative histamine N-monooxygenase AMED_2693 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AMED_2693 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2694 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal AMED_2694 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like AMED_2694 IPR022770 Ferric iron reductase FhuF domain AMED_2695 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMED_2695 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_2695 IPR008146 Glutamine synthetase, catalytic domain AMED_2696 IPR006093 Oxygen oxidoreductase covalent FAD-binding site AMED_2696 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_2696 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_2696 IPR016164 FAD-linked oxidase-like, C-terminal AMED_2696 IPR012951 Berberine/berberine-like AMED_2696 IPR016166 FAD-binding domain, PCMH-type AMED_2696 IPR036318 FAD-binding, type PCMH-like superfamily AMED_2696 IPR006094 FAD linked oxidase, N-terminal AMED_2697 IPR041664 Orc1-like, AAA ATPase domain AMED_2697 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_2697 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2697 IPR029787 Nucleotide cyclase AMED_2697 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMED_2698 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_2698 IPR022962 Soluble pyridine nucleotide transhydrogenase AMED_2698 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_2698 IPR023753 FAD/NAD(P)-binding domain AMED_2698 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2698 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_2699 IPR013785 Aldolase-type TIM barrel AMED_2699 IPR007197 Radical SAM AMED_2699 IPR040086 Protein MJ0683-like AMED_2699 IPR006638 Elp3/MiaB/NifB AMED_2699 IPR006638 Elp3/MiaB/NifB AMED_2699 IPR040086 Protein MJ0683-like AMED_2699 IPR007197 Radical SAM AMED_2699 IPR013785 Aldolase-type TIM barrel AMED_2701 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AMED_2701 IPR004524 Aspartate-tRNA ligase, type 1 AMED_2701 IPR004115 GAD-like domain superfamily AMED_2701 IPR029351 GAD domain AMED_2701 IPR012340 Nucleic acid-binding, OB-fold AMED_2701 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_2701 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_2701 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMED_2706 IPR017972 Cytochrome P450, conserved site AMED_2706 IPR002397 Cytochrome P450, B-class AMED_2706 IPR001128 Cytochrome P450 AMED_2706 IPR036396 Cytochrome P450 superfamily AMED_2707 IPR001647 DNA-binding HTH domain, TetR-type AMED_2707 IPR009057 Homeobox-like domain superfamily AMED_2708 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMED_2708 IPR003593 AAA+ ATPase domain AMED_2708 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2708 IPR032423 AAA C-terminal domain AMED_2708 IPR021886 MgsA AAA+ ATPase C-terminal AMED_2708 IPR003959 ATPase, AAA-type, core AMED_2710 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_2710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_2710 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_2710 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_2710 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_2710 IPR036291 NAD(P)-binding domain superfamily AMED_2713 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AMED_2713 IPR003156 DHHA1 domain AMED_2713 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMED_2713 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AMED_2713 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AMED_2713 IPR009000 Translation protein, beta-barrel domain superfamily AMED_2713 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMED_2713 IPR002318 Alanine-tRNA ligase, class IIc AMED_2713 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AMED_2714 IPR037027 YqgF/RNase H-like domain superfamily AMED_2714 IPR005227 Putative pre-16S rRNA nuclease AMED_2714 IPR006641 YqgF/RNase H-like domain AMED_2714 IPR012337 Ribonuclease H-like superfamily AMED_2715 IPR003770 Endolytic murein transglycosylase AMED_2716 IPR041121 SDH, C-terminal AMED_2716 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AMED_2716 IPR022893 Shikimate dehydrogenase family AMED_2716 IPR011342 Shikimate dehydrogenase AMED_2716 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMED_2716 IPR036291 NAD(P)-binding domain superfamily AMED_2717 IPR007344 GrpB/Dephospho-CoA kinase AMED_2718 IPR032551 HTH-type transcriptional repressor, C-terminal AMED_2718 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2718 IPR009057 Homeobox-like domain superfamily AMED_2718 IPR001647 DNA-binding HTH domain, TetR-type AMED_2720 IPR022742 Serine aminopeptidase, S33 AMED_2720 IPR024981 Domain of unknown function DUF3887 AMED_2720 IPR029058 Alpha/Beta hydrolase fold AMED_2722 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_2722 IPR029009 Allosteric substrate binding domain superfamily AMED_2722 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_2722 IPR036291 NAD(P)-binding domain superfamily AMED_2722 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_2722 IPR002912 ACT domain AMED_2722 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_2722 IPR006236 D-3-phosphoglycerate dehydrogenase AMED_2724 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMED_2724 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMED_2724 IPR035895 HPr-like superfamily AMED_2724 IPR000032 Phosphocarrier protein HPr-like AMED_2725 IPR003352 Phosphotransferase system, EIIC AMED_2725 IPR013013 Phosphotransferase system, EIIC component, type 1 AMED_2726 IPR036390 Winged helix DNA-binding domain superfamily AMED_2726 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_2726 IPR000524 Transcription regulator HTH, GntR AMED_2726 IPR011663 UbiC transcription regulator-associated AMED_2726 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2727 IPR001996 Phosphotransferase system, IIB component, type 1 AMED_2727 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AMED_2727 IPR036878 Glucose permease domain IIB AMED_2728 IPR003352 Phosphotransferase system, EIIC AMED_2728 IPR013013 Phosphotransferase system, EIIC component, type 1 AMED_2728 IPR011055 Duplicated hybrid motif AMED_2728 IPR036878 Glucose permease domain IIB AMED_2728 IPR001996 Phosphotransferase system, IIB component, type 1 AMED_2728 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 AMED_2728 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AMED_2731 IPR007630 RNA polymerase sigma-70 region 4 AMED_2731 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_2731 IPR014284 RNA polymerase sigma-70 like domain AMED_2731 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2731 IPR007627 RNA polymerase sigma-70 region 2 AMED_2731 IPR039425 RNA polymerase sigma-70 like AMED_2731 IPR013325 RNA polymerase sigma factor, region 2 AMED_2731 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2733 IPR035904 Chorismate synthase AroC superfamily AMED_2733 IPR020541 Chorismate synthase, conserved site AMED_2733 IPR000453 Chorismate synthase AMED_2734 IPR023000 Shikimate kinase, conserved site AMED_2734 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2734 IPR000623 Shikimate kinase/Threonine synthase-like 1 AMED_2734 IPR031322 Shikimate kinase/gluconokinase AMED_2735 IPR030960 3-dehydroquinate synthase domain AMED_2735 IPR016037 3-dehydroquinate synthase AroB AMED_2735 IPR030963 3-dehydroquinate synthase family AMED_2736 IPR001874 Dehydroquinase, class II AMED_2736 IPR036441 Dehydroquinase, class II superfamily AMED_2736 IPR018509 Dehydroquinase, class II, conserved site AMED_2737 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_2737 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_2740 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMED_2740 IPR000587 Creatinase, N-terminal AMED_2740 IPR000994 Peptidase M24 AMED_2740 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMED_2740 IPR036005 Creatinase/aminopeptidase-like AMED_2741 IPR015365 Elongation factor P, C-terminal AMED_2741 IPR008991 Translation protein SH3-like domain superfamily AMED_2741 IPR014722 Ribosomal protein L2, domain 2 AMED_2741 IPR020599 Translation elongation factor P/YeiP AMED_2741 IPR013185 Translation elongation factor, KOW-like AMED_2741 IPR001059 Translation elongation factor P/YeiP, central AMED_2741 IPR013852 Translation elongation factor P/YeiP, conserved site AMED_2741 IPR011768 Translation elongation factor P AMED_2741 IPR012340 Nucleic acid-binding, OB-fold AMED_2742 IPR011605 NusB antitermination factor AMED_2742 IPR035926 NusB-like superfamily AMED_2742 IPR006027 NusB/RsmB/TIM44 AMED_2745 IPR023050 Bifunctional protein PyrR AMED_2745 IPR029057 Phosphoribosyltransferase-like AMED_2745 IPR000836 Phosphoribosyltransferase domain AMED_2746 IPR002082 Aspartate carbamoyltransferase AMED_2746 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AMED_2746 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AMED_2746 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AMED_2746 IPR006130 Aspartate/ornithine carbamoyltransferase AMED_2747 IPR006680 Amidohydrolase-related AMED_2747 IPR004722 Dihydroorotase AMED_2747 IPR002195 Dihydroorotase, conserved site AMED_2747 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_2747 IPR032466 Metal-dependent hydrolase AMED_2749 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AMED_2749 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AMED_2749 IPR006274 Carbamoyl-phosphate synthase, small subunit AMED_2749 IPR029062 Class I glutamine amidotransferase-like AMED_2749 IPR017926 Glutamine amidotransferase AMED_2749 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AMED_2750 IPR013134 RAD50, zinc hook AMED_2750 IPR029012 Helix hairpin bin domain superfamily AMED_2750 IPR003959 ATPase, AAA-type, core AMED_2750 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2752 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AMED_2752 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AMED_2752 IPR011607 Methylglyoxal synthase-like domain AMED_2752 IPR016185 Pre-ATP-grasp domain superfamily AMED_2752 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AMED_2752 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AMED_2752 IPR006275 Carbamoyl-phosphate synthase, large subunit AMED_2752 IPR036914 Methylglyoxal synthase-like domain superfamily AMED_2752 IPR011761 ATP-grasp fold AMED_2752 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_2753 IPR011060 Ribulose-phosphate binding barrel AMED_2753 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 AMED_2753 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AMED_2753 IPR013785 Aldolase-type TIM barrel AMED_2753 IPR001754 Orotidine 5'-phosphate decarboxylase domain AMED_2755 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMED_2755 IPR020590 Guanylate kinase, conserved site AMED_2755 IPR008144 Guanylate kinase-like domain AMED_2755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2755 IPR017665 Guanylate kinase AMED_2756 IPR006110 RNA polymerase, subunit omega/K/RPB6 AMED_2756 IPR003716 DNA-directed RNA polymerase, omega subunit AMED_2756 IPR012293 RNA polymerase subunit, RPB6/omega AMED_2756 IPR036161 RPB6/omega subunit-like superfamily AMED_2757 IPR035929 CoaB-like superfamily AMED_2757 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AMED_2757 IPR036551 Flavin prenyltransferase-like AMED_2757 IPR003382 Flavoprotein AMED_2757 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AMED_2758 IPR022636 S-adenosylmethionine synthetase superfamily AMED_2758 IPR022628 S-adenosylmethionine synthetase, N-terminal AMED_2758 IPR022629 S-adenosylmethionine synthetase, central domain AMED_2758 IPR022630 S-adenosylmethionine synthetase, C-terminal AMED_2758 IPR022631 S-adenosylmethionine synthetase, conserved site AMED_2758 IPR002133 S-adenosylmethionine synthetase AMED_2759 IPR005259 Primosomal protein N' AMED_2759 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily AMED_2759 IPR041222 Primosomal protein N', 3' DNA-binding domain AMED_2763 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_2763 IPR000101 Gamma-glutamyltranspeptidase AMED_2764 IPR005794 Methionyl-tRNA formyltransferase AMED_2764 IPR037022 Formyl transferase, C-terminal domain superfamily AMED_2764 IPR036477 Formyl transferase, N-terminal domain superfamily AMED_2764 IPR011034 Formyl transferase-like, C-terminal domain superfamily AMED_2764 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain AMED_2764 IPR005793 Formyl transferase, C-terminal AMED_2764 IPR002376 Formyl transferase, N-terminal AMED_2765 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AMED_2765 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AMED_2765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2765 IPR023267 RNA (C5-cytosine) methyltransferase AMED_2765 IPR006027 NusB/RsmB/TIM44 AMED_2765 IPR035926 NusB-like superfamily AMED_2766 IPR035929 CoaB-like superfamily AMED_2766 IPR036551 Flavin prenyltransferase-like AMED_2766 IPR003382 Flavoprotein AMED_2766 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AMED_2766 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AMED_2767 IPR012338 Beta-lactamase/transpeptidase-like AMED_2767 IPR001466 Beta-lactamase-related AMED_2768 IPR001952 Alkaline phosphatase AMED_2768 IPR018299 Alkaline phosphatase, active site AMED_2768 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMED_2769 IPR000792 Transcription regulator LuxR, C-terminal AMED_2769 IPR001789 Signal transduction response regulator, receiver domain AMED_2769 IPR011006 CheY-like superfamily AMED_2769 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2770 IPR003594 Histidine kinase/HSP90-like ATPase AMED_2770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_2770 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_2771 IPR000056 Ribulose-phosphate 3-epimerase-like AMED_2771 IPR013785 Aldolase-type TIM barrel AMED_2771 IPR011060 Ribulose-phosphate binding barrel AMED_2771 IPR026019 Ribulose-phosphate 3-epimerase AMED_2772 IPR026017 Lumazine-binding domain AMED_2772 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMED_2772 IPR001783 Lumazine-binding protein AMED_2772 IPR017938 Riboflavin synthase-like beta-barrel AMED_2773 IPR000926 GTP cyclohydrolase II, RibA AMED_2773 IPR032677 GTP cyclohydrolase II AMED_2773 IPR036144 RibA-like superfamily AMED_2773 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMED_2773 IPR016299 Riboflavin biosynthesis protein RibBA AMED_2773 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AMED_2774 IPR002180 Lumazine/riboflavin synthase AMED_2774 IPR034964 Lumazine synthase AMED_2774 IPR036467 Lumazine/riboflavin synthase superfamily AMED_2775 IPR019692 Protein of unknown function DUF2581 AMED_2778 IPR038476 UvrC homology region 2 superfamily AMED_2778 IPR000305 GIY-YIG endonuclease AMED_2778 IPR001162 UvrC family homology region AMED_2778 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMED_2778 IPR010994 RuvA domain 2-like AMED_2778 IPR001943 UVR domain AMED_2778 IPR036876 UVR domain superfamily AMED_2778 IPR004791 UvrABC system, subunit C AMED_2778 IPR035901 GIY-YIG endonuclease superfamily AMED_2779 IPR005337 RapZ-like family AMED_2779 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2780 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AMED_2780 IPR010119 Gluconeogenesis factor AMED_2780 IPR038136 Gluconeogenesis factor superfamily AMED_2781 IPR023054 Sporulation regulator WhiA, C-terminal AMED_2781 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2781 IPR003802 Sporulation regulator WhiA AMED_2781 IPR027434 Homing endonuclease AMED_2781 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain AMED_2781 IPR039518 WhiA, LAGLIDADG-like domain AMED_2782 IPR001173 Glycosyltransferase 2-like AMED_2782 IPR029044 Nucleotide-diphospho-sugar transferases AMED_2783 IPR006694 Fatty acid hydroxylase AMED_2787 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_2787 IPR005084 Carbohydrate binding module family 6 AMED_2787 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AMED_2787 IPR013783 Immunoglobulin-like fold AMED_2787 IPR017853 Glycoside hydrolase superfamily AMED_2787 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_2787 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_2787 IPR008979 Galactose-binding-like domain superfamily AMED_2787 IPR028829 Exo-beta-D-glucosaminidase AMED_2788 IPR001260 Coproporphyrinogen III oxidase, aerobic AMED_2788 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily AMED_2788 IPR018375 Coproporphyrinogen III oxidase, conserved site AMED_2796 IPR001123 Amino acid exporter protein, LeuE-type AMED_2798 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMED_2798 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMED_2798 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMED_2798 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMED_2798 IPR036291 NAD(P)-binding domain superfamily AMED_2798 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMED_2799 IPR015824 Phosphoglycerate kinase, N-terminal AMED_2799 IPR015911 Phosphoglycerate kinase, conserved site AMED_2799 IPR001576 Phosphoglycerate kinase AMED_2799 IPR036043 Phosphoglycerate kinase superfamily AMED_2800 IPR013785 Aldolase-type TIM barrel AMED_2800 IPR035990 Triosephosphate isomerase superfamily AMED_2800 IPR020861 Triosephosphate isomerase, active site AMED_2800 IPR000652 Triosephosphate isomerase AMED_2800 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AMED_2801 IPR004692 Preprotein translocase SecG subunit AMED_2803 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_2803 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_2803 IPR003594 Histidine kinase/HSP90-like ATPase AMED_2803 IPR017171 Signal transduction histidine kinase, MctS AMED_2803 IPR033480 Single Cache domain 2 AMED_2804 IPR039104 6-Phosphogluconolactonase AMED_2804 IPR005900 6-phosphogluconolactonase, DevB-type AMED_2804 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AMED_2804 IPR037171 NagB/RpiA transferase-like AMED_2806 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding AMED_2806 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal AMED_2806 IPR001282 Glucose-6-phosphate dehydrogenase AMED_2806 IPR036291 NAD(P)-binding domain superfamily AMED_2806 IPR019796 Glucose-6-phosphate dehydrogenase, active site AMED_2807 IPR035482 Phosphoglucose isomerase, SIS domain 2 AMED_2807 IPR001672 Phosphoglucose isomerase (PGI) AMED_2807 IPR018189 Phosphoglucose isomerase, conserved site AMED_2807 IPR035476 Phosphoglucose isomerase, SIS domain 1 AMED_2808 IPR013785 Aldolase-type TIM barrel AMED_2808 IPR001585 Transaldolase/Fructose-6-phosphate aldolase AMED_2808 IPR018225 Transaldolase, active site AMED_2808 IPR004732 Transaldolase type 2 AMED_2809 IPR005478 Transketolase, bacterial-like AMED_2809 IPR005474 Transketolase, N-terminal AMED_2809 IPR033247 Transketolase family AMED_2809 IPR033248 Transketolase, C-terminal domain AMED_2809 IPR020826 Transketolase binding site AMED_2809 IPR029061 Thiamin diphosphate-binding fold AMED_2809 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_2809 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_2810 IPR000537 UbiA prenyltransferase family AMED_2810 IPR006369 Protohaem IX farnesyltransferase AMED_2817 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMED_2818 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_2818 IPR020843 Polyketide synthase, enoylreductase domain AMED_2818 IPR036291 NAD(P)-binding domain superfamily AMED_2818 IPR011032 GroES-like superfamily AMED_2818 IPR013154 Alcohol dehydrogenase, N-terminal AMED_2818 IPR013149 Alcohol dehydrogenase, C-terminal AMED_2820 IPR011761 ATP-grasp fold AMED_2827 IPR025302 Domain of unknown function DUF4162 AMED_2827 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2827 IPR003439 ABC transporter-like AMED_2827 IPR017871 ABC transporter, conserved site AMED_2827 IPR003593 AAA+ ATPase domain AMED_2827 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_2830 IPR003587 Hint domain N-terminal AMED_2830 IPR003586 Hint domain C-terminal AMED_2830 IPR000825 SUF system FeS cluster assembly, SufBD AMED_2830 IPR027434 Homing endonuclease AMED_2830 IPR006142 Intein AMED_2830 IPR030934 Intein C-terminal splicing region AMED_2830 IPR004042 Intein DOD homing endonuclease AMED_2830 IPR006141 Intein N-terminal splicing region AMED_2830 IPR010231 SUF system FeS cluster assembly, SufB AMED_2830 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMED_2830 IPR036844 Hint domain superfamily AMED_2831 IPR000825 SUF system FeS cluster assembly, SufBD AMED_2831 IPR011542 SUF system FeS cluster assembly, SufD AMED_2831 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMED_2832 IPR003593 AAA+ ATPase domain AMED_2832 IPR003439 ABC transporter-like AMED_2832 IPR017871 ABC transporter, conserved site AMED_2832 IPR010230 FeS cluster assembly SUF system, ATPase SufC AMED_2832 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2833 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2833 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMED_2833 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2833 IPR000192 Aminotransferase class V domain AMED_2833 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2833 IPR010970 Cysteine desulfurase, SufS AMED_2834 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AMED_2835 IPR002744 MIP18 family-like AMED_2835 IPR034904 Fe-S cluster assembly domain superfamily AMED_2837 IPR003844 Uncharacterised protein family UPF0060 AMED_2839 IPR011009 Protein kinase-like domain superfamily AMED_2839 IPR004147 UbiB domain AMED_2839 IPR000719 Protein kinase domain AMED_2840 IPR000013 Peptidase M7, snapalysin AMED_2840 IPR024079 Metallopeptidase, catalytic domain superfamily AMED_2841 IPR003594 Histidine kinase/HSP90-like ATPase AMED_2841 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_2841 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_2842 IPR000792 Transcription regulator LuxR, C-terminal AMED_2842 IPR011006 CheY-like superfamily AMED_2842 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2842 IPR001789 Signal transduction response regulator, receiver domain AMED_2843 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2843 IPR004033 UbiE/COQ5 methyltransferase AMED_2845 IPR000795 Transcription factor, GTP-binding domain AMED_2845 IPR002891 Adenylyl-sulfate kinase AMED_2845 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AMED_2845 IPR031157 Tr-type G domain, conserved site AMED_2845 IPR011779 Sulphate adenylyltransferase, large subunit AMED_2845 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2845 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMED_2845 IPR009000 Translation protein, beta-barrel domain superfamily AMED_2846 IPR002500 Phosphoadenosine phosphosulphate reductase AMED_2846 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_2846 IPR011784 Sulphate adenylyltransferase, small subunit AMED_2849 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2849 IPR023985 Mycofactocin-dependent oxidoreductase AMED_2849 IPR036291 NAD(P)-binding domain superfamily AMED_2849 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2850 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_2850 IPR019734 Tetratricopeptide repeat AMED_2850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2850 IPR013026 Tetratricopeptide repeat-containing domain AMED_2851 IPR006326 UDP-glycosyltransferase, MGT AMED_2851 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase AMED_2854 IPR005330 MHYT domain AMED_2854 IPR035919 EAL domain superfamily AMED_2854 IPR001633 EAL domain AMED_2854 IPR029787 Nucleotide cyclase AMED_2854 IPR000160 GGDEF domain AMED_2858 IPR006261 dNTP triphosphohydrolase AMED_2858 IPR023023 dNTP triphosphohydrolase, type 2 AMED_2858 IPR003607 HD/PDEase domain AMED_2858 IPR006674 HD domain AMED_2858 IPR026875 Phosphohydrolase-associated domain AMED_2861 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2861 IPR017871 ABC transporter, conserved site AMED_2861 IPR003439 ABC transporter-like AMED_2861 IPR032781 ABC-transporter extension domain AMED_2861 IPR003593 AAA+ ATPase domain AMED_2864 IPR036661 Luciferase-like domain superfamily AMED_2864 IPR011251 Luciferase-like domain AMED_2864 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_2866 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_2866 IPR011917 ABC transporter, lipid A export, MsbA AMED_2866 IPR003593 AAA+ ATPase domain AMED_2866 IPR039421 Type I protein exporter AMED_2866 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2866 IPR003439 ABC transporter-like AMED_2866 IPR011527 ABC transporter type 1, transmembrane domain AMED_2866 IPR017871 ABC transporter, conserved site AMED_2867 IPR012338 Beta-lactamase/transpeptidase-like AMED_2867 IPR001466 Beta-lactamase-related AMED_2868 IPR035472 RpiR-like, SIS domain AMED_2868 IPR001347 Sugar isomerase (SIS) AMED_2868 IPR022951 Uncharacterised protein family UPF0309 AMED_2870 IPR003333 Mycolic acid cyclopropane synthase AMED_2870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2871 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_2872 IPR016181 Acyl-CoA N-acyltransferase AMED_2872 IPR000182 GNAT domain AMED_2873 IPR013766 Thioredoxin domain AMED_2873 IPR024706 Peroxiredoxin, AhpC-type AMED_2873 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMED_2873 IPR036249 Thioredoxin-like superfamily AMED_2874 IPR035965 PAS domain superfamily AMED_2874 IPR000160 GGDEF domain AMED_2874 IPR005330 MHYT domain AMED_2874 IPR029787 Nucleotide cyclase AMED_2874 IPR035919 EAL domain superfamily AMED_2874 IPR001633 EAL domain AMED_2875 IPR002403 Cytochrome P450, E-class, group IV AMED_2875 IPR036396 Cytochrome P450 superfamily AMED_2875 IPR017972 Cytochrome P450, conserved site AMED_2875 IPR001128 Cytochrome P450 AMED_2877 IPR020476 NUDIX hydrolase AMED_2877 IPR015797 NUDIX hydrolase-like domain superfamily AMED_2877 IPR020084 NUDIX hydrolase, conserved site AMED_2877 IPR000086 NUDIX hydrolase domain AMED_2877 IPR022927 RNA pyrophosphohydrolase RppH AMED_2878 IPR009078 Ferritin-like superfamily AMED_2878 IPR000358 Ribonucleotide reductase small subunit family AMED_2878 IPR012348 Ribonucleotide reductase-like AMED_2878 IPR033909 Ribonucleotide reductase small subunit AMED_2879 IPR013509 Ribonucleotide reductase large subunit, N-terminal AMED_2879 IPR000788 Ribonucleotide reductase large subunit, C-terminal AMED_2879 IPR039718 Ribonucleoside-diphosphate reductase large subunit AMED_2879 IPR013346 Ribonucleotide reductase, class I , alpha subunit AMED_2879 IPR005144 ATP-cone domain AMED_2879 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AMED_2881 IPR001753 Enoyl-CoA hydratase/isomerase AMED_2881 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_2881 IPR029045 ClpP/crotonase-like domain superfamily AMED_2884 IPR017518 Conserved hypothetical protein CHP03084 AMED_2884 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_2884 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain AMED_2884 IPR013917 tRNA wybutosine-synthesis AMED_2884 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMED_2886 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2886 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2886 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2886 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2886 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2886 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2886 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_2887 IPR029045 ClpP/crotonase-like domain superfamily AMED_2887 IPR034733 Acetyl-CoA carboxylase AMED_2887 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMED_2887 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMED_2888 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_2888 IPR011054 Rudiment single hybrid motif AMED_2888 IPR011053 Single hybrid motif AMED_2888 IPR005481 Biotin carboxylase-like, N-terminal domain AMED_2888 IPR001882 Biotin-binding site AMED_2888 IPR000089 Biotin/lipoyl attachment AMED_2888 IPR011764 Biotin carboxylation domain AMED_2888 IPR005482 Biotin carboxylase, C-terminal AMED_2888 IPR016185 Pre-ATP-grasp domain superfamily AMED_2888 IPR011761 ATP-grasp fold AMED_2889 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_2889 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_2889 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_2889 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_2889 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_2889 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_2890 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2890 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2890 IPR036291 NAD(P)-binding domain superfamily AMED_2893 IPR004268 Peptidoglycan biosynthesis protein MurJ AMED_2893 IPR011009 Protein kinase-like domain superfamily AMED_2895 IPR017853 Glycoside hydrolase superfamily AMED_2896 IPR029787 Nucleotide cyclase AMED_2896 IPR000160 GGDEF domain AMED_2898 IPR027443 Isopenicillin N synthase-like AMED_2898 IPR005123 Oxoglutarate/iron-dependent dioxygenase AMED_2898 IPR026992 Non-haem dioxygenase N-terminal domain AMED_2904 IPR009057 Homeobox-like domain superfamily AMED_2904 IPR001647 DNA-binding HTH domain, TetR-type AMED_2904 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_2904 IPR023769 Nucleoid occlusion factor SlmA AMED_2905 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMED_2905 IPR016039 Thiolase-like AMED_2905 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMED_2905 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMED_2906 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2906 IPR009057 Homeobox-like domain superfamily AMED_2906 IPR001647 DNA-binding HTH domain, TetR-type AMED_2907 IPR035992 Ricin B-like lectins AMED_2907 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_2907 IPR000772 Ricin B, lectin domain AMED_2907 IPR005193 Glycoside hydrolase, family 62, arabinosidase AMED_2911 IPR041347 MftR, C-terminal AMED_2911 IPR009057 Homeobox-like domain superfamily AMED_2911 IPR001647 DNA-binding HTH domain, TetR-type AMED_2911 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_2912 IPR011789 Cu(I)-responsive transcriptional regulator AMED_2912 IPR000551 MerR-type HTH domain AMED_2912 IPR009061 Putative DNA-binding domain superfamily AMED_2915 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain AMED_2915 IPR019775 WD40 repeat, conserved site AMED_2915 IPR038765 Papain-like cysteine peptidase superfamily AMED_2915 IPR017986 WD40-repeat-containing domain AMED_2915 IPR001680 WD40 repeat AMED_2915 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_2915 IPR029030 Caspase-like domain superfamily AMED_2915 IPR020472 G-protein beta WD-40 repeat AMED_2915 IPR036322 WD40-repeat-containing domain superfamily AMED_2915 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMED_2916 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2916 IPR002938 FAD-binding domain AMED_2918 IPR002938 FAD-binding domain AMED_2918 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_2930 IPR029058 Alpha/Beta hydrolase fold AMED_2930 IPR000073 Alpha/beta hydrolase fold-1 AMED_2931 IPR000792 Transcription regulator LuxR, C-terminal AMED_2931 IPR001789 Signal transduction response regulator, receiver domain AMED_2931 IPR016032 Signal transduction response regulator, C-terminal effector AMED_2931 IPR011006 CheY-like superfamily AMED_2940 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 AMED_2940 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AMED_2940 IPR034202 Subtilisin Carlsberg-like catalytic domain AMED_2940 IPR036852 Peptidase S8/S53 domain superfamily AMED_2940 IPR000209 Peptidase S8/S53 domain AMED_2940 IPR022398 Peptidase S8, subtilisin, His-active site AMED_2940 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_2940 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_2940 IPR015500 Peptidase S8, subtilisin-related AMED_2945 IPR036291 NAD(P)-binding domain superfamily AMED_2945 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2945 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_2947 IPR000835 MarR-type HTH domain AMED_2947 IPR036390 Winged helix DNA-binding domain superfamily AMED_2947 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2950 IPR003333 Mycolic acid cyclopropane synthase AMED_2950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_2953 IPR039425 RNA polymerase sigma-70 like AMED_2953 IPR014284 RNA polymerase sigma-70 like domain AMED_2953 IPR007630 RNA polymerase sigma-70 region 4 AMED_2953 IPR007627 RNA polymerase sigma-70 region 2 AMED_2953 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2953 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2953 IPR013325 RNA polymerase sigma factor, region 2 AMED_2955 IPR003008 Tubulin/FtsZ, GTPase domain AMED_2955 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AMED_2955 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily AMED_2955 IPR000158 Cell division protein FtsZ AMED_2955 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMED_2955 IPR024757 Cell division protein FtsZ, C-terminal AMED_2955 IPR020805 Cell division protein FtsZ, conserved site AMED_2955 IPR008280 Tubulin/FtsZ, C-terminal AMED_2956 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMED_2956 IPR003730 Multi-copper polyphenol oxidoreductase AMED_2956 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AMED_2957 IPR011078 Pyridoxal phosphate homeostasis protein AMED_2957 IPR001608 Alanine racemase, N-terminal AMED_2957 IPR029066 PLP-binding barrel AMED_2958 IPR023052 Cell division protein SepF AMED_2958 IPR007561 Cell division protein SepF/SepF-related AMED_2958 IPR038594 SepF-like superfamily AMED_2960 IPR019933 DivIVA domain AMED_2960 IPR007793 DivIVA family AMED_2962 IPR036390 Winged helix DNA-binding domain superfamily AMED_2962 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2962 IPR001845 HTH ArsR-type DNA-binding domain AMED_2962 IPR011991 ArsR-like helix-turn-helix domain AMED_2963 IPR036259 MFS transporter superfamily AMED_2963 IPR011701 Major facilitator superfamily AMED_2963 IPR020846 Major facilitator superfamily domain AMED_2964 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_2964 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMED_2964 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMED_2964 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMED_2964 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_2964 IPR002301 Isoleucine-tRNA ligase AMED_2964 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain AMED_2964 IPR023586 Isoleucine-tRNA ligase, type 2 AMED_2964 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_2966 IPR001845 HTH ArsR-type DNA-binding domain AMED_2966 IPR036390 Winged helix DNA-binding domain superfamily AMED_2966 IPR011991 ArsR-like helix-turn-helix domain AMED_2966 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2967 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_2967 IPR038770 Sodium/solute symporter superfamily AMED_2967 IPR023729 K(+)/H(+) antiporter NhaP2 AMED_2967 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMED_2967 IPR005170 Transporter-associated domain AMED_2967 IPR030151 K(+)/H(+) antiporter NhaP AMED_2967 IPR036318 FAD-binding, type PCMH-like superfamily AMED_2967 IPR006153 Cation/H+ exchanger AMED_2967 IPR006037 Regulator of K+ conductance, C-terminal AMED_2968 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_2968 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA AMED_2968 IPR000192 Aminotransferase class V domain AMED_2968 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_2968 IPR015424 Pyridoxal phosphate-dependent transferase AMED_2968 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMED_2970 IPR001872 Peptidase A8, signal peptidase II AMED_2971 IPR006145 Pseudouridine synthase, RsuA/RluA AMED_2971 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMED_2971 IPR006225 Pseudouridine synthase, RluC/RluD AMED_2971 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMED_2971 IPR002942 RNA-binding S4 domain AMED_2971 IPR036986 RNA-binding S4 domain superfamily AMED_2975 IPR036661 Luciferase-like domain superfamily AMED_2975 IPR011251 Luciferase-like domain AMED_2975 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_2977 IPR003695 Ppx/GppA phosphatase AMED_2978 IPR008928 Six-hairpin glycosidase superfamily AMED_2978 IPR012341 Six-hairpin glycosidase-like superfamily AMED_2978 IPR005196 Glycoside hydrolase, family 65, N-terminal AMED_2978 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AMED_2978 IPR005195 Glycoside hydrolase, family 65, central catalytic AMED_2978 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase AMED_2978 IPR005194 Glycoside hydrolase family 65, C-terminal AMED_2978 IPR011013 Galactose mutarotase-like domain superfamily AMED_2979 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_2979 IPR010976 Beta-phosphoglucomutase hydrolase AMED_2979 IPR036412 HAD-like superfamily AMED_2979 IPR023214 HAD superfamily AMED_2979 IPR006439 HAD hydrolase, subfamily IA AMED_2979 IPR041492 Haloacid dehalogenase-like hydrolase AMED_2980 IPR036390 Winged helix DNA-binding domain superfamily AMED_2980 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2980 IPR001845 HTH ArsR-type DNA-binding domain AMED_2980 IPR011991 ArsR-like helix-turn-helix domain AMED_2985 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2985 IPR036390 Winged helix DNA-binding domain superfamily AMED_2985 IPR000600 ROK family AMED_2987 IPR004294 Carotenoid oxygenase AMED_2991 IPR039425 RNA polymerase sigma-70 like AMED_2991 IPR014284 RNA polymerase sigma-70 like domain AMED_2991 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_2991 IPR007627 RNA polymerase sigma-70 region 2 AMED_2991 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_2991 IPR013325 RNA polymerase sigma factor, region 2 AMED_2991 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_2991 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_2992 IPR009056 Cytochrome c-like domain AMED_2992 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_2992 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_2992 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_2992 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_2992 IPR036909 Cytochrome c-like domain superfamily AMED_2993 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_2993 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_2993 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_2993 IPR036884 [2Fe-2S]-binding domain superfamily AMED_2993 IPR002888 [2Fe-2S]-binding AMED_2994 IPR041522 CdaR, GGDEF-like domain AMED_2994 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_2994 IPR025736 PucR C-terminal helix-turn-helix domain AMED_2997 IPR001647 DNA-binding HTH domain, TetR-type AMED_2997 IPR009057 Homeobox-like domain superfamily AMED_2997 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_2997 IPR013570 Transcription regulator YsiA, C-terminal AMED_2998 IPR036291 NAD(P)-binding domain superfamily AMED_2998 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_2999 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_2999 IPR023210 NADP-dependent oxidoreductase domain AMED_3000 IPR028299 ClpA/B, conserved site 2 AMED_3000 IPR004176 Clp, N-terminal AMED_3000 IPR001270 ClpA/B family AMED_3000 IPR041546 ClpA/ClpB, AAA lid domain AMED_3000 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3000 IPR003593 AAA+ ATPase domain AMED_3000 IPR003959 ATPase, AAA-type, core AMED_3000 IPR018368 ClpA/B, conserved site 1 AMED_3000 IPR019489 Clp ATPase, C-terminal AMED_3000 IPR036628 Clp, N-terminal domain superfamily AMED_3002 IPR032466 Metal-dependent hydrolase AMED_3002 IPR001365 Adenosine/AMP deaminase domain AMED_3002 IPR006650 Adenosine/AMP deaminase active site AMED_3002 IPR006330 Adenosine/adenine deaminase AMED_3004 IPR002121 HRDC domain AMED_3004 IPR010997 HRDC-like superfamily AMED_3004 IPR011545 DEAD/DEAH box helicase domain AMED_3004 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3004 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMED_3004 IPR018982 RQC domain AMED_3004 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3004 IPR001650 Helicase, C-terminal AMED_3004 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_3004 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AMED_3004 IPR004589 DNA helicase, ATP-dependent, RecQ type AMED_3006 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3006 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3006 IPR036291 NAD(P)-binding domain superfamily AMED_3010 IPR000551 MerR-type HTH domain AMED_3010 IPR010211 Redox-sensitive transcriptional activator SoxR AMED_3010 IPR009061 Putative DNA-binding domain superfamily AMED_3010 IPR015358 Transcription regulator MerR, DNA binding AMED_3013 IPR003660 HAMP domain AMED_3013 IPR005467 Histidine kinase domain AMED_3013 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_3013 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_3013 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_3013 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3013 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3014 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3014 IPR001789 Signal transduction response regulator, receiver domain AMED_3014 IPR039420 Transcriptional regulatory protein WalR-like AMED_3014 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3014 IPR011006 CheY-like superfamily AMED_3016 IPR015424 Pyridoxal phosphate-dependent transferase AMED_3016 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_3016 IPR021115 Pyridoxal-phosphate binding site AMED_3016 IPR002129 Pyridoxal phosphate-dependent decarboxylase AMED_3018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_3018 IPR000399 TPP-binding enzyme, conserved site AMED_3018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_3018 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_3018 IPR029061 Thiamin diphosphate-binding fold AMED_3018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_3020 IPR029058 Alpha/Beta hydrolase fold AMED_3020 IPR000639 Epoxide hydrolase-like AMED_3020 IPR000073 Alpha/beta hydrolase fold-1 AMED_3021 IPR008778 Pirin, C-terminal domain AMED_3021 IPR011051 RmlC-like cupin domain superfamily AMED_3021 IPR014710 RmlC-like jelly roll fold AMED_3021 IPR003829 Pirin, N-terminal domain AMED_3021 IPR012093 Pirin AMED_3023 IPR011344 Single-stranded DNA-binding protein AMED_3023 IPR000424 Primosome PriB/single-strand DNA-binding AMED_3023 IPR012340 Nucleic acid-binding, OB-fold AMED_3026 IPR004378 F420H(2)-dependent quinone reductase AMED_3026 IPR012349 FMN-binding split barrel AMED_3027 IPR001460 Penicillin-binding protein, transpeptidase AMED_3027 IPR036950 Penicillin binding protein transglycosylase domain AMED_3027 IPR023346 Lysozyme-like domain superfamily AMED_3027 IPR012338 Beta-lactamase/transpeptidase-like AMED_3027 IPR001264 Glycosyl transferase, family 51 AMED_3029 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3029 IPR017871 ABC transporter, conserved site AMED_3029 IPR003593 AAA+ ATPase domain AMED_3029 IPR003439 ABC transporter-like AMED_3030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3030 IPR025302 Domain of unknown function DUF4162 AMED_3030 IPR003593 AAA+ ATPase domain AMED_3030 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_3030 IPR003439 ABC transporter-like AMED_3030 IPR017871 ABC transporter, conserved site AMED_3033 IPR036291 NAD(P)-binding domain superfamily AMED_3033 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3033 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3033 IPR020843 Polyketide synthase, enoylreductase domain AMED_3033 IPR011032 GroES-like superfamily AMED_3035 IPR028973 PhnB-like AMED_3035 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_3037 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3037 IPR003018 GAF domain AMED_3037 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_3037 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3037 IPR005467 Histidine kinase domain AMED_3037 IPR029016 GAF-like domain superfamily AMED_3038 IPR029058 Alpha/Beta hydrolase fold AMED_3038 IPR002018 Carboxylesterase, type B AMED_3038 IPR019826 Carboxylesterase type B, active site AMED_3039 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_3039 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_3039 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_3039 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_3040 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_3040 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_3040 IPR016166 FAD-binding domain, PCMH-type AMED_3040 IPR036318 FAD-binding, type PCMH-like superfamily AMED_3040 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_3040 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_3041 IPR012675 Beta-grasp domain superfamily AMED_3041 IPR036884 [2Fe-2S]-binding domain superfamily AMED_3041 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3041 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_3041 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_3041 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMED_3041 IPR002888 [2Fe-2S]-binding AMED_3041 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_3044 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_3044 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_3044 IPR016161 Aldehyde/histidinol dehydrogenase AMED_3044 IPR010061 Methylmalonate-semialdehyde dehydrogenase AMED_3044 IPR015590 Aldehyde dehydrogenase domain AMED_3044 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_3046 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_3046 IPR011663 UbiC transcription regulator-associated AMED_3046 IPR036390 Winged helix DNA-binding domain superfamily AMED_3046 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3046 IPR000524 Transcription regulator HTH, GntR AMED_3048 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3048 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3048 IPR027399 Alcohol dehydrogenase GroES-associated AMED_3048 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3048 IPR011032 GroES-like superfamily AMED_3048 IPR036291 NAD(P)-binding domain superfamily AMED_3051 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3051 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3052 IPR002645 STAS domain AMED_3052 IPR036513 STAS domain superfamily AMED_3053 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain AMED_3053 IPR012292 Globin/Protoglobin AMED_3053 IPR002645 STAS domain AMED_3053 IPR036513 STAS domain superfamily AMED_3057 IPR002068 Alpha crystallin/Hsp20 domain AMED_3057 IPR008978 HSP20-like chaperone AMED_3057 IPR031107 Small heat shock protein HSP20 AMED_3058 IPR036291 NAD(P)-binding domain superfamily AMED_3058 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3058 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3059 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMED_3059 IPR014241 Cytochrome c oxidase, subunit I bacterial type AMED_3059 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMED_3059 IPR000883 Cytochrome c oxidase subunit I AMED_3059 IPR023616 Cytochrome c oxidase-like, subunit I domain AMED_3060 IPR013783 Immunoglobulin-like fold AMED_3060 IPR011837 Glycogen debranching enzyme, GlgX type AMED_3060 IPR014756 Immunoglobulin E-set AMED_3060 IPR017853 Glycoside hydrolase superfamily AMED_3060 IPR013780 Glycosyl hydrolase, all-beta AMED_3060 IPR004193 Glycoside hydrolase, family 13, N-terminal AMED_3060 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_3061 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain AMED_3061 IPR027407 Manganese catalase, C-terminal AMED_3061 IPR007760 Manganese catalase AMED_3061 IPR009078 Ferritin-like superfamily AMED_3061 IPR012347 Ferritin-like AMED_3063 IPR036291 NAD(P)-binding domain superfamily AMED_3063 IPR008030 NmrA-like domain AMED_3064 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3064 IPR002577 Helix-turn-helix, HxlR type AMED_3064 IPR036390 Winged helix DNA-binding domain superfamily AMED_3070 IPR028082 Periplasmic binding protein-like I AMED_3070 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3070 IPR000843 LacI-type HTH domain AMED_3072 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3072 IPR035906 MetI-like superfamily AMED_3072 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like AMED_3073 IPR035906 MetI-like superfamily AMED_3073 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3076 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3076 IPR001647 DNA-binding HTH domain, TetR-type AMED_3076 IPR009057 Homeobox-like domain superfamily AMED_3077 IPR023210 NADP-dependent oxidoreductase domain AMED_3077 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_3078 IPR009057 Homeobox-like domain superfamily AMED_3078 IPR018060 DNA binding HTH domain, AraC-type AMED_3078 IPR002818 DJ-1/PfpI AMED_3078 IPR029062 Class I glutamine amidotransferase-like AMED_3078 IPR018062 HTH domain AraC-type, conserved site AMED_3079 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_3079 IPR023210 NADP-dependent oxidoreductase domain AMED_3081 IPR026881 WYL domain AMED_3081 IPR001034 DeoR-type HTH domain AMED_3081 IPR013196 Helix-turn-helix, type 11 AMED_3081 IPR028349 Protein PafC AMED_3081 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3081 IPR036390 Winged helix DNA-binding domain superfamily AMED_3083 IPR039476 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase AMED_3083 IPR000031 PurE domain AMED_3083 IPR035893 PurE domain superfamily AMED_3084 IPR018657 LarA-like, N-terminal AMED_3085 IPR032466 Metal-dependent hydrolase AMED_3085 IPR006680 Amidohydrolase-related AMED_3086 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMED_3086 IPR011234 Fumarylacetoacetase-like, C-terminal AMED_3087 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_3087 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_3087 IPR034610 L-fuconate dehydratase AMED_3087 IPR029065 Enolase C-terminal domain-like AMED_3087 IPR029017 Enolase-like, N-terminal AMED_3087 IPR036849 Enolase-like, C-terminal domain superfamily AMED_3088 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3088 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3088 IPR036291 NAD(P)-binding domain superfamily AMED_3090 IPR015861 ABC transporter, ribose import, RbsA AMED_3090 IPR003439 ABC transporter-like AMED_3090 IPR017871 ABC transporter, conserved site AMED_3090 IPR003593 AAA+ ATPase domain AMED_3090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3091 IPR001851 ABC transporter, permease AMED_3092 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_3092 IPR023210 NADP-dependent oxidoreductase domain AMED_3097 IPR028082 Periplasmic binding protein-like I AMED_3097 IPR000843 LacI-type HTH domain AMED_3097 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3098 IPR028082 Periplasmic binding protein-like I AMED_3098 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3098 IPR000843 LacI-type HTH domain AMED_3099 IPR020845 AMP-binding, conserved site AMED_3099 IPR000873 AMP-dependent synthetase/ligase AMED_3099 IPR042099 AMP-dependent synthetase-like superfamily AMED_3099 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3100 IPR000073 Alpha/beta hydrolase fold-1 AMED_3100 IPR029058 Alpha/Beta hydrolase fold AMED_3101 IPR024412 Lsr2 AMED_3101 IPR042261 Lsr2, dimerization domain AMED_3101 IPR042254 Lsr2, DNA binding domain AMED_3102 IPR010071 Amino acid adenylation domain AMED_3102 IPR036736 ACP-like superfamily AMED_3102 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3102 IPR006162 Phosphopantetheine attachment site AMED_3102 IPR009081 Phosphopantetheine binding ACP domain AMED_3102 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3102 IPR010060 Non-ribosomal peptide synthase AMED_3102 IPR001242 Condensation domain AMED_3102 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3102 IPR042099 AMP-dependent synthetase-like superfamily AMED_3102 IPR000873 AMP-dependent synthetase/ligase AMED_3102 IPR020845 AMP-binding, conserved site AMED_3103 IPR005153 MbtH-like domain AMED_3103 IPR038020 MbtH-like domain superfamily AMED_3103 IPR037407 MbtH-like protein AMED_3104 IPR001466 Beta-lactamase-related AMED_3104 IPR012338 Beta-lactamase/transpeptidase-like AMED_3104 IPR001586 Beta-lactamase, class-C active site AMED_3105 IPR001242 Condensation domain AMED_3105 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3105 IPR042099 AMP-dependent synthetase-like superfamily AMED_3105 IPR000873 AMP-dependent synthetase/ligase AMED_3105 IPR020845 AMP-binding, conserved site AMED_3105 IPR009081 Phosphopantetheine binding ACP domain AMED_3105 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3105 IPR006162 Phosphopantetheine attachment site AMED_3105 IPR036736 ACP-like superfamily AMED_3105 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3105 IPR010060 Non-ribosomal peptide synthase AMED_3105 IPR010071 Amino acid adenylation domain AMED_3107 IPR002397 Cytochrome P450, B-class AMED_3107 IPR017972 Cytochrome P450, conserved site AMED_3107 IPR036396 Cytochrome P450 superfamily AMED_3107 IPR001128 Cytochrome P450 AMED_3112 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3112 IPR036291 NAD(P)-binding domain superfamily AMED_3112 IPR020843 Polyketide synthase, enoylreductase domain AMED_3112 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_3112 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3112 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 AMED_3112 IPR011032 GroES-like superfamily AMED_3114 IPR004302 Cellulose/chitin-binding protein, N-terminal AMED_3114 IPR041029 N-acetylglucosamine binding protein A domain 2 AMED_3114 IPR014756 Immunoglobulin E-set AMED_3115 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_3115 IPR001279 Metallo-beta-lactamase AMED_3120 IPR023393 START-like domain superfamily AMED_3120 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMED_3126 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3126 IPR036291 NAD(P)-binding domain superfamily AMED_3126 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3127 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3127 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3127 IPR036291 NAD(P)-binding domain superfamily AMED_3129 IPR029045 ClpP/crotonase-like domain superfamily AMED_3129 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3129 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3130 IPR008979 Galactose-binding-like domain superfamily AMED_3130 IPR023232 Glycoside hydrolase, family 2, active site AMED_3130 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_3130 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_3130 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_3130 IPR017853 Glycoside hydrolase superfamily AMED_3130 IPR032311 Domain of unknown function DUF4982 AMED_3130 IPR013783 Immunoglobulin-like fold AMED_3130 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_3130 IPR006101 Glycoside hydrolase, family 2 AMED_3130 IPR008964 Invasin/intimin cell-adhesion fragments AMED_3130 IPR040605 Glycoside hydrolase family 2, domain 5 AMED_3132 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3132 IPR020459 AMP-binding AMED_3132 IPR042099 AMP-dependent synthetase-like superfamily AMED_3132 IPR000873 AMP-dependent synthetase/ligase AMED_3132 IPR020845 AMP-binding, conserved site AMED_3133 IPR042099 AMP-dependent synthetase-like superfamily AMED_3133 IPR000873 AMP-dependent synthetase/ligase AMED_3133 IPR020845 AMP-binding, conserved site AMED_3133 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3134 IPR017947 Aryldialkylphosphatase, zinc-binding site AMED_3134 IPR032466 Metal-dependent hydrolase AMED_3134 IPR001559 Phosphotriesterase AMED_3135 IPR009057 Homeobox-like domain superfamily AMED_3135 IPR041612 YfiR, C-terminal AMED_3135 IPR001647 DNA-binding HTH domain, TetR-type AMED_3135 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3136 IPR000073 Alpha/beta hydrolase fold-1 AMED_3136 IPR029058 Alpha/Beta hydrolase fold AMED_3136 IPR000639 Epoxide hydrolase-like AMED_3138 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3138 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3138 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3138 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3138 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3138 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3139 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3139 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3139 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3139 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3139 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3139 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3140 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3140 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3140 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3140 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3140 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_3140 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3140 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3142 IPR039375 Nodulation protein N-like AMED_3142 IPR029069 HotDog domain superfamily AMED_3142 IPR002539 MaoC-like dehydratase domain AMED_3143 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3143 IPR036291 NAD(P)-binding domain superfamily AMED_3143 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3144 IPR034593 Mandelate racemase-like AMED_3144 IPR029017 Enolase-like, N-terminal AMED_3144 IPR036849 Enolase-like, C-terminal domain superfamily AMED_3144 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AMED_3144 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_3144 IPR029065 Enolase C-terminal domain-like AMED_3144 IPR023592 D-galactonate dehydratase AMED_3144 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_3147 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3147 IPR035906 MetI-like superfamily AMED_3148 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMED_3148 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase AMED_3148 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMED_3149 IPR008271 Serine/threonine-protein kinase, active site AMED_3149 IPR000719 Protein kinase domain AMED_3149 IPR011009 Protein kinase-like domain superfamily AMED_3153 IPR011006 CheY-like superfamily AMED_3153 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3153 IPR000792 Transcription regulator LuxR, C-terminal AMED_3153 IPR001789 Signal transduction response regulator, receiver domain AMED_3156 IPR020846 Major facilitator superfamily domain AMED_3156 IPR011701 Major facilitator superfamily AMED_3156 IPR036259 MFS transporter superfamily AMED_3158 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3158 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_3158 IPR003660 HAMP domain AMED_3158 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_3158 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3158 IPR005467 Histidine kinase domain AMED_3158 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_3159 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3159 IPR039420 Transcriptional regulatory protein WalR-like AMED_3159 IPR011006 CheY-like superfamily AMED_3159 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3159 IPR001789 Signal transduction response regulator, receiver domain AMED_3162 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3162 IPR003439 ABC transporter-like AMED_3162 IPR003593 AAA+ ATPase domain AMED_3162 IPR017871 ABC transporter, conserved site AMED_3166 IPR001647 DNA-binding HTH domain, TetR-type AMED_3166 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3166 IPR019915 Transcription regulator, pyrimidine utilisation, RutR AMED_3166 IPR013573 Transcription regulator YcdC, C-terminal AMED_3166 IPR009057 Homeobox-like domain superfamily AMED_3168 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3168 IPR011924 Lipoprotein releasing system, ATP-binding protein AMED_3168 IPR015854 ABC transporter, lipoprotein release, LolD AMED_3168 IPR017871 ABC transporter, conserved site AMED_3168 IPR003439 ABC transporter-like AMED_3168 IPR003593 AAA+ ATPase domain AMED_3171 IPR013840 NAD-dependent DNA ligase, N-terminal AMED_3171 IPR010994 RuvA domain 2-like AMED_3171 IPR004150 NAD-dependent DNA ligase, OB-fold AMED_3171 IPR036420 BRCT domain superfamily AMED_3171 IPR041663 DisA/LigA, helix-hairpin-helix motif AMED_3171 IPR001679 NAD-dependent DNA ligase AMED_3171 IPR018239 NAD-dependent DNA ligase, active site AMED_3171 IPR001357 BRCT domain AMED_3171 IPR013839 NAD-dependent DNA ligase, adenylation AMED_3171 IPR012340 Nucleic acid-binding, OB-fold AMED_3171 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMED_3172 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase AMED_3172 IPR011251 Luciferase-like domain AMED_3172 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMED_3172 IPR036661 Luciferase-like domain superfamily AMED_3174 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3174 IPR007627 RNA polymerase sigma-70 region 2 AMED_3174 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_3174 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_3174 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_3174 IPR014284 RNA polymerase sigma-70 like domain AMED_3174 IPR039425 RNA polymerase sigma-70 like AMED_3174 IPR013325 RNA polymerase sigma factor, region 2 AMED_3178 IPR029058 Alpha/Beta hydrolase fold AMED_3178 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3178 IPR016292 Epoxide hydrolase AMED_3178 IPR000639 Epoxide hydrolase-like AMED_3178 IPR010497 Epoxide hydrolase, N-terminal AMED_3180 IPR011701 Major facilitator superfamily AMED_3180 IPR036259 MFS transporter superfamily AMED_3180 IPR020846 Major facilitator superfamily domain AMED_3183 IPR013325 RNA polymerase sigma factor, region 2 AMED_3183 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_3183 IPR014284 RNA polymerase sigma-70 like domain AMED_3183 IPR037401 SnoaL-like domain AMED_3183 IPR039425 RNA polymerase sigma-70 like AMED_3183 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3183 IPR007627 RNA polymerase sigma-70 region 2 AMED_3183 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_3183 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_3183 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_3183 IPR032710 NTF2-like domain superfamily AMED_3187 IPR005496 Integral membrane protein TerC AMED_3187 IPR022369 Integral membrane protein TerC, riboswitch-linked AMED_3189 IPR017853 Glycoside hydrolase superfamily AMED_3189 IPR013780 Glycosyl hydrolase, all-beta AMED_3189 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_3191 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_3191 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_3191 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_3191 IPR029009 Allosteric substrate binding domain superfamily AMED_3191 IPR036291 NAD(P)-binding domain superfamily AMED_3191 IPR002912 ACT domain AMED_3191 IPR006236 D-3-phosphoglycerate dehydrogenase AMED_3191 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_3192 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3192 IPR035906 MetI-like superfamily AMED_3193 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3193 IPR035906 MetI-like superfamily AMED_3196 IPR014036 DeoR C-terminal sensor domain AMED_3196 IPR001034 DeoR-type HTH domain AMED_3196 IPR037171 NagB/RpiA transferase-like AMED_3196 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMED_3196 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3196 IPR036390 Winged helix DNA-binding domain superfamily AMED_3197 IPR000719 Protein kinase domain AMED_3197 IPR008271 Serine/threonine-protein kinase, active site AMED_3197 IPR017441 Protein kinase, ATP binding site AMED_3197 IPR038232 PknH-like extracellular domain superfamily AMED_3197 IPR026954 PknH-like extracellular domain AMED_3197 IPR011009 Protein kinase-like domain superfamily AMED_3198 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3198 IPR000843 LacI-type HTH domain AMED_3198 IPR028082 Periplasmic binding protein-like I AMED_3199 IPR008271 Serine/threonine-protein kinase, active site AMED_3199 IPR017441 Protein kinase, ATP binding site AMED_3199 IPR000719 Protein kinase domain AMED_3199 IPR005543 PASTA domain AMED_3199 IPR011009 Protein kinase-like domain superfamily AMED_3200 IPR008271 Serine/threonine-protein kinase, active site AMED_3200 IPR011009 Protein kinase-like domain superfamily AMED_3200 IPR005543 PASTA domain AMED_3200 IPR000719 Protein kinase domain AMED_3200 IPR017441 Protein kinase, ATP binding site AMED_3203 IPR015246 Formate dehydrogenase, transmembrane AMED_3203 IPR014603 Formate dehydrogenase iron-sulphur subunit AMED_3203 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_3203 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_3203 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria AMED_3203 IPR038384 Formate dehydrogenase, C-terminal domain superfamily AMED_3206 IPR036259 MFS transporter superfamily AMED_3206 IPR005828 Major facilitator, sugar transporter-like AMED_3206 IPR020846 Major facilitator superfamily domain AMED_3209 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_3209 IPR007061 Protein of unknown function DUF664 AMED_3210 IPR016461 O-methyltransferase COMT-type AMED_3210 IPR036390 Winged helix DNA-binding domain superfamily AMED_3210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3210 IPR001077 O-methyltransferase domain AMED_3210 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3211 IPR001387 Cro/C1-type helix-turn-helix domain AMED_3211 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3214 IPR001466 Beta-lactamase-related AMED_3214 IPR012338 Beta-lactamase/transpeptidase-like AMED_3215 IPR001757 P-type ATPase AMED_3215 IPR023214 HAD superfamily AMED_3215 IPR036412 HAD-like superfamily AMED_3215 IPR008250 P-type ATPase, A domain superfamily AMED_3215 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_3215 IPR018303 P-type ATPase, phosphorylation site AMED_3215 IPR023299 P-type ATPase, cytoplasmic domain N AMED_3215 IPR006068 Cation-transporting P-type ATPase, C-terminal AMED_3217 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase AMED_3217 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMED_3217 IPR011251 Luciferase-like domain AMED_3217 IPR036661 Luciferase-like domain superfamily AMED_3218 IPR036390 Winged helix DNA-binding domain superfamily AMED_3218 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AMED_3218 IPR005119 LysR, substrate-binding AMED_3218 IPR000847 Transcription regulator HTH, LysR AMED_3218 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3220 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3220 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AMED_3220 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMED_3220 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMED_3220 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_3220 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_3220 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria AMED_3221 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_3221 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_3221 IPR012675 Beta-grasp domain superfamily AMED_3221 IPR009051 Alpha-helical ferredoxin AMED_3221 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AMED_3221 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AMED_3221 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_3221 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_3221 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_3228 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMED_3228 IPR017767 Bacterial phospholipase C, phosphocholine-specific AMED_3228 IPR007312 Phosphoesterase AMED_3228 IPR008475 Bacterial phospholipase C, C-terminal domain AMED_3228 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMED_3228 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3230 IPR016461 O-methyltransferase COMT-type AMED_3230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3230 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3230 IPR036390 Winged helix DNA-binding domain superfamily AMED_3230 IPR001077 O-methyltransferase domain AMED_3232 IPR012727 Glycine oxidase ThiO AMED_3232 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3232 IPR006076 FAD dependent oxidoreductase AMED_3234 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMED_3234 IPR007419 BFD-like [2Fe-2S]-binding domain AMED_3234 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B AMED_3234 IPR023753 FAD/NAD(P)-binding domain AMED_3234 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3235 IPR020624 Schiff base-forming aldolase, conserved site AMED_3235 IPR002220 DapA-like AMED_3235 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AMED_3235 IPR013785 Aldolase-type TIM barrel AMED_3235 IPR020625 Schiff base-forming aldolase, active site AMED_3236 IPR008794 Proline racemase family AMED_3240 IPR034686 Terpene cyclase-like 2 AMED_3240 IPR008949 Isoprenoid synthase domain superfamily AMED_3241 IPR041698 Methyltransferase domain 25 AMED_3241 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3242 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3242 IPR035906 MetI-like superfamily AMED_3243 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3243 IPR035906 MetI-like superfamily AMED_3253 IPR002549 Transmembrane protein TqsA-like AMED_3254 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal AMED_3254 IPR006710 Glycoside hydrolase, family 43 AMED_3254 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_3255 IPR012340 Nucleic acid-binding, OB-fold AMED_3255 IPR033649 LigD polymerase domain, MtLigD-type AMED_3255 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_3255 IPR014146 DNA ligase D, ligase domain AMED_3255 IPR012310 DNA ligase, ATP-dependent, central AMED_3255 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_3255 IPR014145 DNA ligase D, polymerase domain AMED_3256 IPR009057 Homeobox-like domain superfamily AMED_3256 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_3256 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3256 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3256 IPR001647 DNA-binding HTH domain, TetR-type AMED_3258 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_3258 IPR004033 UbiE/COQ5 methyltransferase AMED_3258 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3259 IPR036412 HAD-like superfamily AMED_3259 IPR006439 HAD hydrolase, subfamily IA AMED_3259 IPR041492 Haloacid dehalogenase-like hydrolase AMED_3259 IPR023214 HAD superfamily AMED_3259 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_3259 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMED_3267 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_3267 IPR026578 L-carnitine dehydrogenase AMED_3267 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_3267 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_3267 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_3267 IPR036291 NAD(P)-binding domain superfamily AMED_3268 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3268 IPR020845 AMP-binding, conserved site AMED_3268 IPR000873 AMP-dependent synthetase/ligase AMED_3268 IPR042099 AMP-dependent synthetase-like superfamily AMED_3268 IPR005914 Acetoacetyl-CoA synthase AMED_3269 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3269 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3269 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3269 IPR029045 ClpP/crotonase-like domain superfamily AMED_3270 IPR042099 AMP-dependent synthetase-like superfamily AMED_3270 IPR020845 AMP-binding, conserved site AMED_3270 IPR000873 AMP-dependent synthetase/ligase AMED_3270 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3271 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3271 IPR011032 GroES-like superfamily AMED_3271 IPR036291 NAD(P)-binding domain superfamily AMED_3271 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3271 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3272 IPR016161 Aldehyde/histidinol dehydrogenase AMED_3272 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_3272 IPR011264 Betaine aldehyde dehydrogenase AMED_3272 IPR015590 Aldehyde dehydrogenase domain AMED_3272 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_3272 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_3272 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_3276 IPR001647 DNA-binding HTH domain, TetR-type AMED_3276 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) AMED_3276 IPR009057 Homeobox-like domain superfamily AMED_3276 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3284 IPR042099 AMP-dependent synthetase-like superfamily AMED_3284 IPR020459 AMP-binding AMED_3284 IPR020845 AMP-binding, conserved site AMED_3284 IPR006162 Phosphopantetheine attachment site AMED_3284 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3284 IPR036736 ACP-like superfamily AMED_3284 IPR010071 Amino acid adenylation domain AMED_3284 IPR009081 Phosphopantetheine binding ACP domain AMED_3284 IPR000873 AMP-dependent synthetase/ligase AMED_3285 IPR001919 Carbohydrate-binding type-2 domain AMED_3285 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_3285 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_3285 IPR001547 Glycoside hydrolase, family 5 AMED_3285 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_3285 IPR017853 Glycoside hydrolase superfamily AMED_3285 IPR018366 Carbohydrate-binding type-2, conserved site AMED_3286 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_3286 IPR006710 Glycoside hydrolase, family 43 AMED_3286 IPR008979 Galactose-binding-like domain superfamily AMED_3286 IPR006584 Cellulose binding, type IV AMED_3286 IPR005084 Carbohydrate binding module family 6 AMED_3287 IPR017853 Glycoside hydrolase superfamily AMED_3287 IPR035992 Ricin B-like lectins AMED_3287 IPR031158 Glycosyl hydrolases family 10, active site AMED_3287 IPR001000 Glycoside hydrolase family 10 domain AMED_3287 IPR000772 Ricin B, lectin domain AMED_3288 IPR016288 1, 4-beta cellobiohydrolase AMED_3288 IPR036434 1, 4-beta cellobiohydrolase superfamily AMED_3288 IPR001919 Carbohydrate-binding type-2 domain AMED_3288 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_3288 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_3288 IPR018366 Carbohydrate-binding type-2, conserved site AMED_3288 IPR001524 Glycoside hydrolase, family 6, conserved site AMED_3290 IPR035992 Ricin B-like lectins AMED_3290 IPR000772 Ricin B, lectin domain AMED_3293 IPR000772 Ricin B, lectin domain AMED_3293 IPR035992 Ricin B-like lectins AMED_3293 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_3293 IPR005193 Glycoside hydrolase, family 62, arabinosidase AMED_3296 IPR000843 LacI-type HTH domain AMED_3296 IPR028082 Periplasmic binding protein-like I AMED_3296 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3299 IPR037473 Rubber oxygenase Lcp-like AMED_3299 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3299 IPR018713 Domain of unknown function DUF2236 AMED_3300 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3300 IPR001647 DNA-binding HTH domain, TetR-type AMED_3300 IPR023769 Nucleoid occlusion factor SlmA AMED_3300 IPR009057 Homeobox-like domain superfamily AMED_3300 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3301 IPR014284 RNA polymerase sigma-70 like domain AMED_3301 IPR039425 RNA polymerase sigma-70 like AMED_3301 IPR007627 RNA polymerase sigma-70 region 2 AMED_3301 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_3301 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3301 IPR013325 RNA polymerase sigma factor, region 2 AMED_3301 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_3304 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3304 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase AMED_3304 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3304 IPR036291 NAD(P)-binding domain superfamily AMED_3305 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_3305 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_3305 IPR029061 Thiamin diphosphate-binding fold AMED_3305 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_3305 IPR000399 TPP-binding enzyme, conserved site AMED_3305 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_3307 IPR010640 Low temperature requirement A AMED_3309 IPR004942 Roadblock/LAMTOR2 domain AMED_3311 IPR005330 MHYT domain AMED_3311 IPR029787 Nucleotide cyclase AMED_3311 IPR001633 EAL domain AMED_3311 IPR035919 EAL domain superfamily AMED_3311 IPR000160 GGDEF domain AMED_3313 IPR036390 Winged helix DNA-binding domain superfamily AMED_3313 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3313 IPR011663 UbiC transcription regulator-associated AMED_3313 IPR000524 Transcription regulator HTH, GntR AMED_3313 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_3314 IPR029018 Beta-hexosaminidase-like, domain 2 AMED_3314 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMED_3314 IPR037524 PA14/GLEYA domain AMED_3314 IPR011658 PA14 domain AMED_3314 IPR017853 Glycoside hydrolase superfamily AMED_3314 IPR025705 Beta-hexosaminidase AMED_3314 IPR015883 Glycoside hydrolase family 20, catalytic domain AMED_3315 IPR035906 MetI-like superfamily AMED_3315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3316 IPR035906 MetI-like superfamily AMED_3316 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3317 IPR006059 Bacterial extracellular solute-binding protein AMED_3319 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_3319 IPR001721 Threonine dehydratase, ACT-like domain AMED_3319 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_3319 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_3319 IPR011820 L-threonine dehydratase biosynthetic IlvA AMED_3321 IPR017867 Protein-tyrosine phosphatase, low molecular weight AMED_3321 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMED_3321 IPR023485 Phosphotyrosine protein phosphatase I AMED_3322 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_3322 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3322 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3322 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3322 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3322 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3322 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3323 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3323 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3323 IPR000792 Transcription regulator LuxR, C-terminal AMED_3323 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3323 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3326 IPR001789 Signal transduction response regulator, receiver domain AMED_3326 IPR000160 GGDEF domain AMED_3326 IPR011006 CheY-like superfamily AMED_3326 IPR029787 Nucleotide cyclase AMED_3327 IPR000843 LacI-type HTH domain AMED_3327 IPR028082 Periplasmic binding protein-like I AMED_3327 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3334 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3334 IPR009057 Homeobox-like domain superfamily AMED_3334 IPR001647 DNA-binding HTH domain, TetR-type AMED_3334 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) AMED_3335 IPR001254 Serine proteases, trypsin domain AMED_3335 IPR000126 Serine proteases, V8 family, serine active site AMED_3335 IPR008256 Peptidase S1B AMED_3335 IPR009003 Peptidase S1, PA clan AMED_3335 IPR028301 Serine proteases, V8 family, histidine active site AMED_3336 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3336 IPR001647 DNA-binding HTH domain, TetR-type AMED_3336 IPR009057 Homeobox-like domain superfamily AMED_3336 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3338 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_3338 IPR007627 RNA polymerase sigma-70 region 2 AMED_3338 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_3338 IPR014284 RNA polymerase sigma-70 like domain AMED_3338 IPR039425 RNA polymerase sigma-70 like AMED_3338 IPR013325 RNA polymerase sigma factor, region 2 AMED_3338 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_3338 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3340 IPR036144 RibA-like superfamily AMED_3340 IPR000926 GTP cyclohydrolase II, RibA AMED_3340 IPR032677 GTP cyclohydrolase II AMED_3345 IPR001647 DNA-binding HTH domain, TetR-type AMED_3345 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_3345 IPR009057 Homeobox-like domain superfamily AMED_3345 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3347 IPR029058 Alpha/Beta hydrolase fold AMED_3347 IPR000073 Alpha/beta hydrolase fold-1 AMED_3347 IPR000639 Epoxide hydrolase-like AMED_3347 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AMED_3350 IPR011251 Luciferase-like domain AMED_3350 IPR036661 Luciferase-like domain superfamily AMED_3353 IPR007685 RelA/SpoT AMED_3354 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3354 IPR003012 Tetracycline transcriptional regulator, TetR AMED_3354 IPR001647 DNA-binding HTH domain, TetR-type AMED_3354 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3354 IPR004111 Tetracycline repressor TetR, C-terminal AMED_3354 IPR009057 Homeobox-like domain superfamily AMED_3355 IPR017972 Cytochrome P450, conserved site AMED_3355 IPR001128 Cytochrome P450 AMED_3355 IPR002397 Cytochrome P450, B-class AMED_3355 IPR036396 Cytochrome P450 superfamily AMED_3358 IPR004778 Homoserine/Threonine efflux protein AMED_3358 IPR001123 Amino acid exporter protein, LeuE-type AMED_3359 IPR036869 Chaperone J-domain superfamily AMED_3359 IPR018253 DnaJ domain, conserved site AMED_3359 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMED_3359 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AMED_3359 IPR008971 HSP40/DnaJ peptide-binding AMED_3359 IPR002939 Chaperone DnaJ, C-terminal AMED_3359 IPR012724 Chaperone DnaJ AMED_3359 IPR001623 DnaJ domain AMED_3360 IPR042099 AMP-dependent synthetase-like superfamily AMED_3360 IPR000873 AMP-dependent synthetase/ligase AMED_3360 IPR020845 AMP-binding, conserved site AMED_3360 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3363 IPR011013 Galactose mutarotase-like domain superfamily AMED_3363 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AMED_3363 IPR015443 Aldose 1-epimerase AMED_3363 IPR018052 Aldose 1-epimerase, conserved site AMED_3363 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_3365 IPR004869 Membrane transport protein MMPL domain AMED_3365 IPR000731 Sterol-sensing domain AMED_3366 IPR023721 Multidrug resistance protein MdtD AMED_3366 IPR036259 MFS transporter superfamily AMED_3366 IPR020846 Major facilitator superfamily domain AMED_3366 IPR011701 Major facilitator superfamily AMED_3367 IPR042099 AMP-dependent synthetase-like superfamily AMED_3367 IPR000873 AMP-dependent synthetase/ligase AMED_3368 IPR014043 Acyl transferase AMED_3368 IPR036736 ACP-like superfamily AMED_3368 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3368 IPR006162 Phosphopantetheine attachment site AMED_3368 IPR013968 Polyketide synthase, ketoreductase domain AMED_3368 IPR009081 Phosphopantetheine binding ACP domain AMED_3368 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3368 IPR020807 Polyketide synthase, dehydratase domain AMED_3368 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3368 IPR016039 Thiolase-like AMED_3368 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3368 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3368 IPR036291 NAD(P)-binding domain superfamily AMED_3368 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3368 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3368 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3368 IPR018201 Beta-ketoacyl synthase, active site AMED_3369 IPR029045 ClpP/crotonase-like domain superfamily AMED_3369 IPR034733 Acetyl-CoA carboxylase AMED_3369 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AMED_3369 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMED_3369 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMED_3370 IPR029058 Alpha/Beta hydrolase fold AMED_3370 IPR000801 Putative esterase AMED_3370 IPR018392 LysM domain AMED_3370 IPR036779 LysM domain superfamily AMED_3375 IPR036291 NAD(P)-binding domain superfamily AMED_3375 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3376 IPR036291 NAD(P)-binding domain superfamily AMED_3376 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3376 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3377 IPR029045 ClpP/crotonase-like domain superfamily AMED_3377 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3377 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3378 IPR037171 NagB/RpiA transferase-like AMED_3378 IPR004165 Coenzyme A transferase family I AMED_3379 IPR037171 NagB/RpiA transferase-like AMED_3379 IPR004165 Coenzyme A transferase family I AMED_3380 IPR013785 Aldolase-type TIM barrel AMED_3380 IPR004136 Nitronate monooxygenase AMED_3381 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase AMED_3381 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMED_3381 IPR036661 Luciferase-like domain superfamily AMED_3381 IPR011251 Luciferase-like domain AMED_3382 IPR016039 Thiolase-like AMED_3382 IPR020616 Thiolase, N-terminal AMED_3382 IPR020617 Thiolase, C-terminal AMED_3382 IPR020613 Thiolase, conserved site AMED_3382 IPR002155 Thiolase AMED_3383 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3383 IPR036291 NAD(P)-binding domain superfamily AMED_3383 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3384 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3384 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3384 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3384 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3384 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3384 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3385 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3385 IPR020845 AMP-binding, conserved site AMED_3385 IPR000873 AMP-dependent synthetase/ligase AMED_3385 IPR042099 AMP-dependent synthetase-like superfamily AMED_3386 IPR029045 ClpP/crotonase-like domain superfamily AMED_3386 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3387 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3387 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3387 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3387 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3387 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3387 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3388 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3388 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3388 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3388 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3388 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3388 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3389 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3389 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3389 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3389 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3389 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3389 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3392 IPR000524 Transcription regulator HTH, GntR AMED_3392 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_3392 IPR036390 Winged helix DNA-binding domain superfamily AMED_3392 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3392 IPR011711 GntR, C-terminal AMED_3393 IPR001604 DNA/RNA non-specific endonuclease AMED_3393 IPR020821 Extracellular Endonuclease, subunit A AMED_3393 IPR040255 Non-specific endonuclease AMED_3393 IPR009003 Peptidase S1, PA clan AMED_3396 IPR020843 Polyketide synthase, enoylreductase domain AMED_3396 IPR036291 NAD(P)-binding domain superfamily AMED_3396 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3396 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3396 IPR011032 GroES-like superfamily AMED_3396 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3397 IPR029058 Alpha/Beta hydrolase fold AMED_3397 IPR000073 Alpha/beta hydrolase fold-1 AMED_3397 IPR000639 Epoxide hydrolase-like AMED_3398 IPR003660 HAMP domain AMED_3398 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMED_3398 IPR029787 Nucleotide cyclase AMED_3400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_3400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_3400 IPR023753 FAD/NAD(P)-binding domain AMED_3400 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3401 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3401 IPR023769 Nucleoid occlusion factor SlmA AMED_3401 IPR001647 DNA-binding HTH domain, TetR-type AMED_3401 IPR009057 Homeobox-like domain superfamily AMED_3402 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_3402 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3402 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP AMED_3402 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative AMED_3405 IPR013785 Aldolase-type TIM barrel AMED_3405 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_3405 IPR013780 Glycosyl hydrolase, all-beta AMED_3405 IPR017853 Glycoside hydrolase superfamily AMED_3405 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_3405 IPR002241 Glycoside hydrolase, family 27 AMED_3406 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3406 IPR000843 LacI-type HTH domain AMED_3406 IPR028082 Periplasmic binding protein-like I AMED_3407 IPR006059 Bacterial extracellular solute-binding protein AMED_3407 IPR006061 Solute-binding family 1, conserved site AMED_3408 IPR035906 MetI-like superfamily AMED_3408 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3409 IPR035906 MetI-like superfamily AMED_3409 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3410 IPR012878 Beta-L-arabinofuranosidase, GH127 AMED_3410 IPR008928 Six-hairpin glycosidase superfamily AMED_3414 IPR024079 Metallopeptidase, catalytic domain superfamily AMED_3414 IPR000013 Peptidase M7, snapalysin AMED_3415 IPR001647 DNA-binding HTH domain, TetR-type AMED_3415 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3415 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3415 IPR009057 Homeobox-like domain superfamily AMED_3416 IPR011701 Major facilitator superfamily AMED_3416 IPR020846 Major facilitator superfamily domain AMED_3416 IPR036259 MFS transporter superfamily AMED_3418 IPR000600 ROK family AMED_3418 IPR004654 Glucokinase ROK AMED_3419 IPR002293 Amino acid/polyamine transporter I AMED_3419 IPR004758 Amino acid transporter AMED_3420 IPR008979 Galactose-binding-like domain superfamily AMED_3420 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_3420 IPR017853 Glycoside hydrolase superfamily AMED_3420 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_3420 IPR013783 Immunoglobulin-like fold AMED_3420 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AMED_3420 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_3420 IPR005084 Carbohydrate binding module family 6 AMED_3420 IPR028829 Exo-beta-D-glucosaminidase AMED_3421 IPR004654 Glucokinase ROK AMED_3421 IPR000600 ROK family AMED_3423 IPR028082 Periplasmic binding protein-like I AMED_3423 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3423 IPR000843 LacI-type HTH domain AMED_3423 IPR023588 Transcription regulator HTH, PurR AMED_3426 IPR036396 Cytochrome P450 superfamily AMED_3426 IPR001128 Cytochrome P450 AMED_3426 IPR002397 Cytochrome P450, B-class AMED_3426 IPR017972 Cytochrome P450, conserved site AMED_3432 IPR036986 RNA-binding S4 domain superfamily AMED_3432 IPR002942 RNA-binding S4 domain AMED_3432 IPR006145 Pseudouridine synthase, RsuA/RluA AMED_3432 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMED_3432 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMED_3432 IPR006225 Pseudouridine synthase, RluC/RluD AMED_3434 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3434 IPR000835 MarR-type HTH domain AMED_3434 IPR036390 Winged helix DNA-binding domain superfamily AMED_3435 IPR019914 Pyrimidine monooxygenase RutA AMED_3435 IPR011251 Luciferase-like domain AMED_3435 IPR036661 Luciferase-like domain superfamily AMED_3437 IPR007341 Transglycosylase-associated protein AMED_3438 IPR001279 Metallo-beta-lactamase AMED_3438 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_3445 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3445 IPR042099 AMP-dependent synthetase-like superfamily AMED_3445 IPR000873 AMP-dependent synthetase/ligase AMED_3445 IPR020845 AMP-binding, conserved site AMED_3446 IPR030048 Survival protein SurE AMED_3446 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AMED_3446 IPR036523 SurE-like phosphatase/nucleotidase superfamily AMED_3450 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3450 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3450 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 AMED_3450 IPR036291 NAD(P)-binding domain superfamily AMED_3450 IPR011032 GroES-like superfamily AMED_3451 IPR036291 NAD(P)-binding domain superfamily AMED_3451 IPR001509 NAD-dependent epimerase/dehydratase AMED_3456 IPR013108 Amidohydrolase 3 AMED_3456 IPR032466 Metal-dependent hydrolase AMED_3456 IPR023100 D-aminoacylase, insert domain superfamily AMED_3456 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_3459 IPR010197 o-Succinylbenzoate synthase, MenC type 2 AMED_3459 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_3459 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_3459 IPR029065 Enolase C-terminal domain-like AMED_3459 IPR036849 Enolase-like, C-terminal domain superfamily AMED_3459 IPR029017 Enolase-like, N-terminal AMED_3460 IPR012338 Beta-lactamase/transpeptidase-like AMED_3460 IPR001466 Beta-lactamase-related AMED_3463 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3463 IPR035906 MetI-like superfamily AMED_3464 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3464 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_3464 IPR017871 ABC transporter, conserved site AMED_3464 IPR003439 ABC transporter-like AMED_3464 IPR003593 AAA+ ATPase domain AMED_3465 IPR017871 ABC transporter, conserved site AMED_3465 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_3465 IPR003593 AAA+ ATPase domain AMED_3465 IPR003439 ABC transporter-like AMED_3465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3466 IPR001466 Beta-lactamase-related AMED_3466 IPR012338 Beta-lactamase/transpeptidase-like AMED_3467 IPR036259 MFS transporter superfamily AMED_3467 IPR020846 Major facilitator superfamily domain AMED_3467 IPR011701 Major facilitator superfamily AMED_3467 IPR004638 Drug resistance transporter EmrB-like AMED_3469 IPR020803 Polyketide synthase, methyltransferase domain AMED_3469 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3469 IPR013216 Methyltransferase type 11 AMED_3471 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3471 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3471 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_3471 IPR036291 NAD(P)-binding domain superfamily AMED_3472 IPR020846 Major facilitator superfamily domain AMED_3472 IPR011701 Major facilitator superfamily AMED_3472 IPR036259 MFS transporter superfamily AMED_3473 IPR036396 Cytochrome P450 superfamily AMED_3473 IPR002397 Cytochrome P450, B-class AMED_3473 IPR001128 Cytochrome P450 AMED_3473 IPR017972 Cytochrome P450, conserved site AMED_3474 IPR006200 Transcription regulator LexA AMED_3474 IPR015927 Peptidase S24/S26A/S26B/S26C AMED_3474 IPR039418 LexA-like AMED_3474 IPR036286 LexA/Signal peptidase-like superfamily AMED_3474 IPR006199 LexA repressor, DNA-binding domain AMED_3474 IPR006197 Peptidase S24, LexA-like AMED_3474 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3474 IPR036390 Winged helix DNA-binding domain superfamily AMED_3475 IPR014756 Immunoglobulin E-set AMED_3475 IPR004302 Cellulose/chitin-binding protein, N-terminal AMED_3477 IPR006162 Phosphopantetheine attachment site AMED_3477 IPR009081 Phosphopantetheine binding ACP domain AMED_3477 IPR020843 Polyketide synthase, enoylreductase domain AMED_3477 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3477 IPR001227 Acyl transferase domain superfamily AMED_3477 IPR036736 ACP-like superfamily AMED_3477 IPR014043 Acyl transferase AMED_3477 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3477 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3477 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3477 IPR011032 GroES-like superfamily AMED_3477 IPR013968 Polyketide synthase, ketoreductase domain AMED_3477 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3477 IPR020807 Polyketide synthase, dehydratase domain AMED_3477 IPR036291 NAD(P)-binding domain superfamily AMED_3478 IPR006710 Glycoside hydrolase, family 43 AMED_3478 IPR008979 Galactose-binding-like domain superfamily AMED_3478 IPR005084 Carbohydrate binding module family 6 AMED_3478 IPR006584 Cellulose binding, type IV AMED_3478 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_3481 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3481 IPR002937 Amine oxidase AMED_3481 IPR001613 Flavin amine oxidase AMED_3482 IPR029056 Ribokinase-like AMED_3482 IPR017583 Tagatose/fructose phosphokinase AMED_3482 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_3482 IPR011611 Carbohydrate kinase PfkB AMED_3482 IPR022463 Fructose 1-phosphate kinase AMED_3483 IPR001303 Class II aldolase/adducin N-terminal AMED_3483 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMED_3483 IPR000649 Initiation factor 2B-related AMED_3483 IPR005251 Methylthioribose-1-phosphate isomerase AMED_3483 IPR011559 Initiation factor 2B alpha/beta/delta AMED_3483 IPR017714 Methylthioribulose-1-phosphate dehydratase AMED_3483 IPR037171 NagB/RpiA transferase-like AMED_3483 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal AMED_3485 IPR000390 Small multidrug resistance protein family AMED_3486 IPR036291 NAD(P)-binding domain superfamily AMED_3486 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3486 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3487 IPR005524 Predicted permease DUF318 AMED_3490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3490 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3490 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3490 IPR000792 Transcription regulator LuxR, C-terminal AMED_3490 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3492 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3492 IPR036291 NAD(P)-binding domain superfamily AMED_3492 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3494 IPR020845 AMP-binding, conserved site AMED_3494 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3494 IPR042099 AMP-dependent synthetase-like superfamily AMED_3494 IPR000873 AMP-dependent synthetase/ligase AMED_3495 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_3495 IPR011251 Luciferase-like domain AMED_3495 IPR036661 Luciferase-like domain superfamily AMED_3496 IPR036291 NAD(P)-binding domain superfamily AMED_3496 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3496 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3498 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AMED_3498 IPR000794 Beta-ketoacyl synthase AMED_3498 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3498 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3498 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3498 IPR018201 Beta-ketoacyl synthase, active site AMED_3498 IPR016039 Thiolase-like AMED_3501 IPR005247 YbhB/YbcL AMED_3501 IPR036610 PEBP-like superfamily AMED_3501 IPR008914 Phosphatidylethanolamine-binding protein AMED_3504 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3504 IPR036291 NAD(P)-binding domain superfamily AMED_3504 IPR011032 GroES-like superfamily AMED_3504 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3504 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3504 IPR020843 Polyketide synthase, enoylreductase domain AMED_3505 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_3505 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3505 IPR023753 FAD/NAD(P)-binding domain AMED_3505 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_3505 IPR006258 Dihydrolipoamide dehydrogenase AMED_3505 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_3505 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMED_3507 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3507 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3507 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3507 IPR000792 Transcription regulator LuxR, C-terminal AMED_3510 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_3510 IPR036412 HAD-like superfamily AMED_3510 IPR001757 P-type ATPase AMED_3510 IPR027256 P-type ATPase, subfamily IB AMED_3510 IPR036163 Heavy metal-associated domain superfamily AMED_3510 IPR006121 Heavy metal-associated domain, HMA AMED_3510 IPR000579 Cation-transporting P-type ATPase A/B AMED_3510 IPR008250 P-type ATPase, A domain superfamily AMED_3510 IPR017969 Heavy-metal-associated, conserved site AMED_3510 IPR023214 HAD superfamily AMED_3510 IPR018303 P-type ATPase, phosphorylation site AMED_3510 IPR023299 P-type ATPase, cytoplasmic domain N AMED_3511 IPR001915 Peptidase M48 AMED_3511 IPR022919 Peptidase M48, protease HtpX, putative AMED_3517 IPR001046 NRAMP family AMED_3517 IPR005025 NADPH-dependent FMN reductase-like AMED_3517 IPR029039 Flavoprotein-like superfamily AMED_3518 IPR006153 Cation/H+ exchanger AMED_3518 IPR038770 Sodium/solute symporter superfamily AMED_3518 IPR036291 NAD(P)-binding domain superfamily AMED_3518 IPR006037 Regulator of K+ conductance, C-terminal AMED_3518 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMED_3518 IPR003148 Regulator of K+ conductance, N-terminal AMED_3524 IPR008279 PEP-utilising enzyme, mobile domain AMED_3524 IPR036291 NAD(P)-binding domain superfamily AMED_3524 IPR001509 NAD-dependent epimerase/dehydratase AMED_3524 IPR036637 Phosphohistidine domain superfamily AMED_3525 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3525 IPR022138 Helicase SWF/SNF-related AMED_3525 IPR038718 SNF2-like, N-terminal domain superfamily AMED_3525 IPR001650 Helicase, C-terminal AMED_3525 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_3525 IPR000330 SNF2-related, N-terminal domain AMED_3526 IPR007527 Zinc finger, SWIM-type AMED_3533 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3533 IPR002938 FAD-binding domain AMED_3533 IPR027545 Kynurenine 3-monooxygenase AMED_3539 IPR002932 Glutamate synthase domain AMED_3539 IPR027283 Glutamate synthase large subunit-like protein, bacteria AMED_3539 IPR013785 Aldolase-type TIM barrel AMED_3539 IPR024188 Glutamate synthase large subunit-like protein AMED_3540 IPR001789 Signal transduction response regulator, receiver domain AMED_3540 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3540 IPR011006 CheY-like superfamily AMED_3540 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3540 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3540 IPR039420 Transcriptional regulatory protein WalR-like AMED_3541 IPR013767 PAS fold AMED_3541 IPR035965 PAS domain superfamily AMED_3541 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_3541 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_3541 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_3541 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3541 IPR005467 Histidine kinase domain AMED_3541 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3541 IPR031967 PhoR, single Cache-like domain AMED_3541 IPR000014 PAS domain AMED_3544 IPR017871 ABC transporter, conserved site AMED_3544 IPR025857 MacB-like periplasmic core domain AMED_3544 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_3544 IPR003838 ABC transporter permease protein domain AMED_3544 IPR003439 ABC transporter-like AMED_3544 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3544 IPR003593 AAA+ ATPase domain AMED_3545 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_3545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3545 IPR003593 AAA+ ATPase domain AMED_3545 IPR003838 ABC transporter permease protein domain AMED_3545 IPR025857 MacB-like periplasmic core domain AMED_3545 IPR017871 ABC transporter, conserved site AMED_3545 IPR003439 ABC transporter-like AMED_3548 IPR020846 Major facilitator superfamily domain AMED_3548 IPR003663 Sugar/inositol transporter AMED_3548 IPR036259 MFS transporter superfamily AMED_3548 IPR005829 Sugar transporter, conserved site AMED_3548 IPR005828 Major facilitator, sugar transporter-like AMED_3549 IPR000073 Alpha/beta hydrolase fold-1 AMED_3549 IPR000639 Epoxide hydrolase-like AMED_3549 IPR029058 Alpha/Beta hydrolase fold AMED_3551 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3551 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_3552 IPR000792 Transcription regulator LuxR, C-terminal AMED_3552 IPR011006 CheY-like superfamily AMED_3552 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3552 IPR001789 Signal transduction response regulator, receiver domain AMED_3553 IPR001466 Beta-lactamase-related AMED_3553 IPR012338 Beta-lactamase/transpeptidase-like AMED_3557 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_3557 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3560 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3560 IPR036291 NAD(P)-binding domain superfamily AMED_3563 IPR018062 HTH domain AraC-type, conserved site AMED_3563 IPR009057 Homeobox-like domain superfamily AMED_3563 IPR018060 DNA binding HTH domain, AraC-type AMED_3563 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AMED_3565 IPR036291 NAD(P)-binding domain superfamily AMED_3565 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3566 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3566 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3566 IPR036291 NAD(P)-binding domain superfamily AMED_3575 IPR016040 NAD(P)-binding domain AMED_3575 IPR036291 NAD(P)-binding domain superfamily AMED_3577 IPR036396 Cytochrome P450 superfamily AMED_3577 IPR017972 Cytochrome P450, conserved site AMED_3577 IPR002397 Cytochrome P450, B-class AMED_3577 IPR001128 Cytochrome P450 AMED_3581 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3581 IPR001789 Signal transduction response regulator, receiver domain AMED_3581 IPR011006 CheY-like superfamily AMED_3581 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3581 IPR039420 Transcriptional regulatory protein WalR-like AMED_3582 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_3582 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_3582 IPR005467 Histidine kinase domain AMED_3582 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_3582 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3582 IPR003660 HAMP domain AMED_3582 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3586 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMED_3586 IPR002509 NodB homology domain AMED_3586 IPR026402 Chitooligosaccharide deacetylase NodB AMED_3591 IPR035909 Methylesterase CheB, C-terminal AMED_3591 IPR000014 PAS domain AMED_3591 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMED_3591 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMED_3591 IPR000780 MCP methyltransferase, CheR-type AMED_3591 IPR035965 PAS domain superfamily AMED_3591 IPR013656 PAS fold-4 AMED_3591 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3591 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_3592 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_3592 IPR035909 Methylesterase CheB, C-terminal AMED_3593 IPR002938 FAD-binding domain AMED_3593 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3597 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3597 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3597 IPR036291 NAD(P)-binding domain superfamily AMED_3597 IPR011032 GroES-like superfamily AMED_3597 IPR020843 Polyketide synthase, enoylreductase domain AMED_3597 IPR010085 Crotonyl-CoA reductase AMED_3598 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3598 IPR001647 DNA-binding HTH domain, TetR-type AMED_3598 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3598 IPR009057 Homeobox-like domain superfamily AMED_3598 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_3600 IPR036874 Carbonic anhydrase superfamily AMED_3600 IPR001765 Carbonic anhydrase AMED_3604 IPR029058 Alpha/Beta hydrolase fold AMED_3604 IPR013094 Alpha/beta hydrolase fold-3 AMED_3610 IPR036291 NAD(P)-binding domain superfamily AMED_3610 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3610 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3611 IPR029030 Caspase-like domain superfamily AMED_3611 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain AMED_3611 IPR036322 WD40-repeat-containing domain superfamily AMED_3611 IPR017986 WD40-repeat-containing domain AMED_3611 IPR019775 WD40 repeat, conserved site AMED_3611 IPR020472 G-protein beta WD-40 repeat AMED_3611 IPR001680 WD40 repeat AMED_3611 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMED_3611 IPR038765 Papain-like cysteine peptidase superfamily AMED_3611 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3614 IPR009061 Putative DNA-binding domain superfamily AMED_3614 IPR011789 Cu(I)-responsive transcriptional regulator AMED_3614 IPR000551 MerR-type HTH domain AMED_3614 IPR015358 Transcription regulator MerR, DNA binding AMED_3616 IPR039425 RNA polymerase sigma-70 like AMED_3616 IPR037401 SnoaL-like domain AMED_3616 IPR013325 RNA polymerase sigma factor, region 2 AMED_3616 IPR014284 RNA polymerase sigma-70 like domain AMED_3616 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_3616 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3616 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_3616 IPR007627 RNA polymerase sigma-70 region 2 AMED_3616 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_3616 IPR032710 NTF2-like domain superfamily AMED_3616 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_3620 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily AMED_3620 IPR013230 Peptidase M15A, C-terminal AMED_3620 IPR002477 Peptidoglycan binding-like AMED_3620 IPR036365 PGBD-like superfamily AMED_3620 IPR036366 PGBD superfamily AMED_3622 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3622 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3622 IPR002182 NB-ARC AMED_3622 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3622 IPR005158 Bacterial transcriptional activator domain AMED_3622 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3622 IPR019734 Tetratricopeptide repeat AMED_3622 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3623 IPR011006 CheY-like superfamily AMED_3623 IPR000792 Transcription regulator LuxR, C-terminal AMED_3623 IPR001789 Signal transduction response regulator, receiver domain AMED_3623 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3624 IPR004568 Phosphopantetheine-protein transferase domain AMED_3624 IPR037143 4'-phosphopantetheinyl transferase domain superfamily AMED_3624 IPR002582 Holo-[acyl carrier protein] synthase AMED_3624 IPR008278 4'-phosphopantetheinyl transferase domain AMED_3625 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3625 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3625 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3625 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_3625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3628 IPR003231 Acyl carrier protein (ACP) AMED_3628 IPR009081 Phosphopantetheine binding ACP domain AMED_3628 IPR006162 Phosphopantetheine attachment site AMED_3628 IPR036736 ACP-like superfamily AMED_3629 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMED_3629 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_3629 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_3629 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_3629 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_3629 IPR002986 Diaminopimelate decarboxylase, LysA AMED_3629 IPR029066 PLP-binding barrel AMED_3633 IPR003593 AAA+ ATPase domain AMED_3633 IPR017871 ABC transporter, conserved site AMED_3633 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_3633 IPR025302 Domain of unknown function DUF4162 AMED_3633 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3633 IPR003439 ABC transporter-like AMED_3635 IPR038152 Carbamoyltransferase, C-terminal domain superfamily AMED_3635 IPR031730 Carbamoyltransferase, C-terminal AMED_3635 IPR003696 Carbamoyltransferase AMED_3641 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_3641 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_3641 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_3641 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_3642 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_3642 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_3642 IPR016166 FAD-binding domain, PCMH-type AMED_3642 IPR036318 FAD-binding, type PCMH-like superfamily AMED_3642 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_3642 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_3643 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_3643 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMED_3643 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3643 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_3643 IPR002888 [2Fe-2S]-binding AMED_3643 IPR036884 [2Fe-2S]-binding domain superfamily AMED_3643 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_3643 IPR012675 Beta-grasp domain superfamily AMED_3645 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_3645 IPR002241 Glycoside hydrolase, family 27 AMED_3645 IPR013785 Aldolase-type TIM barrel AMED_3645 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_3645 IPR013780 Glycosyl hydrolase, all-beta AMED_3645 IPR017853 Glycoside hydrolase superfamily AMED_3650 IPR012349 FMN-binding split barrel AMED_3650 IPR004378 F420H(2)-dependent quinone reductase AMED_3652 IPR001647 DNA-binding HTH domain, TetR-type AMED_3652 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3652 IPR009057 Homeobox-like domain superfamily AMED_3653 IPR036908 RlpA-like domain superfamily AMED_3656 IPR012338 Beta-lactamase/transpeptidase-like AMED_3656 IPR001466 Beta-lactamase-related AMED_3658 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3658 IPR036291 NAD(P)-binding domain superfamily AMED_3658 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3659 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3659 IPR036390 Winged helix DNA-binding domain superfamily AMED_3659 IPR005119 LysR, substrate-binding AMED_3659 IPR000847 Transcription regulator HTH, LysR AMED_3663 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMED_3663 IPR013783 Immunoglobulin-like fold AMED_3663 IPR008979 Galactose-binding-like domain superfamily AMED_3663 IPR036116 Fibronectin type III superfamily AMED_3663 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMED_3663 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMED_3663 IPR016007 Alpha-L-rhamnosidase AMED_3663 IPR012341 Six-hairpin glycosidase-like superfamily AMED_3663 IPR008928 Six-hairpin glycosidase superfamily AMED_3663 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMED_3666 IPR009081 Phosphopantetheine binding ACP domain AMED_3666 IPR016039 Thiolase-like AMED_3666 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_3666 IPR006162 Phosphopantetheine attachment site AMED_3666 IPR015083 Polyketide synthase, docking domain AMED_3666 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3666 IPR013968 Polyketide synthase, ketoreductase domain AMED_3666 IPR011032 GroES-like superfamily AMED_3666 IPR018201 Beta-ketoacyl synthase, active site AMED_3666 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3666 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3666 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3666 IPR014043 Acyl transferase AMED_3666 IPR036736 ACP-like superfamily AMED_3666 IPR036291 NAD(P)-binding domain superfamily AMED_3666 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3666 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3666 IPR001227 Acyl transferase domain superfamily AMED_3666 IPR020807 Polyketide synthase, dehydratase domain AMED_3666 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3666 IPR020843 Polyketide synthase, enoylreductase domain AMED_3666 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3666 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3672 IPR029058 Alpha/Beta hydrolase fold AMED_3672 IPR000073 Alpha/beta hydrolase fold-1 AMED_3672 IPR000639 Epoxide hydrolase-like AMED_3673 IPR000847 Transcription regulator HTH, LysR AMED_3673 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3673 IPR036390 Winged helix DNA-binding domain superfamily AMED_3673 IPR005119 LysR, substrate-binding AMED_3673 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AMED_3678 IPR006710 Glycoside hydrolase, family 43 AMED_3678 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase AMED_3678 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_3680 IPR029059 Alpha/beta hydrolase fold-5 AMED_3680 IPR029058 Alpha/Beta hydrolase fold AMED_3681 IPR016039 Thiolase-like AMED_3681 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3681 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3681 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3681 IPR018201 Beta-ketoacyl synthase, active site AMED_3681 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3681 IPR001242 Condensation domain AMED_3681 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3681 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3681 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3681 IPR009081 Phosphopantetheine binding ACP domain AMED_3681 IPR014043 Acyl transferase AMED_3681 IPR036736 ACP-like superfamily AMED_3681 IPR001227 Acyl transferase domain superfamily AMED_3681 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3682 IPR001242 Condensation domain AMED_3682 IPR036736 ACP-like superfamily AMED_3682 IPR006162 Phosphopantetheine attachment site AMED_3682 IPR010060 Non-ribosomal peptide synthase AMED_3682 IPR009081 Phosphopantetheine binding ACP domain AMED_3682 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3682 IPR020802 Polyketide synthase, thioesterase domain AMED_3682 IPR010071 Amino acid adenylation domain AMED_3682 IPR029058 Alpha/Beta hydrolase fold AMED_3682 IPR001031 Thioesterase AMED_3682 IPR020845 AMP-binding, conserved site AMED_3682 IPR000873 AMP-dependent synthetase/ligase AMED_3682 IPR042099 AMP-dependent synthetase-like superfamily AMED_3682 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3684 IPR036736 ACP-like superfamily AMED_3684 IPR010071 Amino acid adenylation domain AMED_3684 IPR020845 AMP-binding, conserved site AMED_3684 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3684 IPR010080 Thioester reductase-like domain AMED_3684 IPR006162 Phosphopantetheine attachment site AMED_3684 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3684 IPR001242 Condensation domain AMED_3684 IPR013120 Male sterility, NAD-binding AMED_3684 IPR036291 NAD(P)-binding domain superfamily AMED_3684 IPR010060 Non-ribosomal peptide synthase AMED_3684 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3684 IPR009081 Phosphopantetheine binding ACP domain AMED_3684 IPR000873 AMP-dependent synthetase/ligase AMED_3684 IPR042099 AMP-dependent synthetase-like superfamily AMED_3685 IPR010060 Non-ribosomal peptide synthase AMED_3685 IPR009081 Phosphopantetheine binding ACP domain AMED_3685 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3685 IPR042099 AMP-dependent synthetase-like superfamily AMED_3685 IPR000873 AMP-dependent synthetase/ligase AMED_3685 IPR020845 AMP-binding, conserved site AMED_3685 IPR036736 ACP-like superfamily AMED_3685 IPR010071 Amino acid adenylation domain AMED_3685 IPR006162 Phosphopantetheine attachment site AMED_3685 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3685 IPR001242 Condensation domain AMED_3685 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3690 IPR003660 HAMP domain AMED_3690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_3690 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3690 IPR005467 Histidine kinase domain AMED_3690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_3690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_3691 IPR039420 Transcriptional regulatory protein WalR-like AMED_3691 IPR001789 Signal transduction response regulator, receiver domain AMED_3691 IPR011006 CheY-like superfamily AMED_3691 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3691 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3691 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3693 IPR011006 CheY-like superfamily AMED_3693 IPR000792 Transcription regulator LuxR, C-terminal AMED_3693 IPR001789 Signal transduction response regulator, receiver domain AMED_3693 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3694 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_3694 IPR007895 MASE1 AMED_3694 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3694 IPR005467 Histidine kinase domain AMED_3694 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3697 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3697 IPR002938 FAD-binding domain AMED_3700 IPR001207 Transposase, mutator type AMED_3704 IPR009057 Homeobox-like domain superfamily AMED_3704 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3704 IPR001647 DNA-binding HTH domain, TetR-type AMED_3704 IPR023769 Nucleoid occlusion factor SlmA AMED_3704 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3705 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3705 IPR036291 NAD(P)-binding domain superfamily AMED_3705 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3706 IPR011008 Dimeric alpha-beta barrel AMED_3706 IPR019888 Transcription regulator AsnC-type AMED_3706 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_3706 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_3706 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3706 IPR000485 AsnC-type HTH domain AMED_3706 IPR036390 Winged helix DNA-binding domain superfamily AMED_3706 IPR011991 ArsR-like helix-turn-helix domain AMED_3708 IPR006162 Phosphopantetheine attachment site AMED_3708 IPR009081 Phosphopantetheine binding ACP domain AMED_3708 IPR036291 NAD(P)-binding domain superfamily AMED_3708 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3708 IPR013968 Polyketide synthase, ketoreductase domain AMED_3708 IPR020843 Polyketide synthase, enoylreductase domain AMED_3708 IPR001227 Acyl transferase domain superfamily AMED_3708 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3708 IPR011032 GroES-like superfamily AMED_3708 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3708 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3708 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3708 IPR014043 Acyl transferase AMED_3708 IPR036736 ACP-like superfamily AMED_3708 IPR020807 Polyketide synthase, dehydratase domain AMED_3709 IPR029058 Alpha/Beta hydrolase fold AMED_3709 IPR013094 Alpha/beta hydrolase fold-3 AMED_3712 IPR008979 Galactose-binding-like domain superfamily AMED_3712 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_3712 IPR023232 Glycoside hydrolase, family 2, active site AMED_3712 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase AMED_3712 IPR032312 Beta-galactosidase, domain 4 AMED_3712 IPR013783 Immunoglobulin-like fold AMED_3712 IPR006101 Glycoside hydrolase, family 2 AMED_3712 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_3712 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_3712 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_3712 IPR017853 Glycoside hydrolase superfamily AMED_3712 IPR023230 Glycoside hydrolase, family 2, conserved site AMED_3712 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_3712 IPR011013 Galactose mutarotase-like domain superfamily AMED_3712 IPR004199 Beta galactosidase small chain/ domain 5 AMED_3713 IPR017853 Glycoside hydrolase superfamily AMED_3713 IPR001579 Glycoside hydrolase, chitinase active site AMED_3713 IPR013783 Immunoglobulin-like fold AMED_3713 IPR036116 Fibronectin type III superfamily AMED_3713 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_3713 IPR003961 Fibronectin type III AMED_3713 IPR029070 Chitinase insertion domain superfamily AMED_3713 IPR011583 Chitinase II AMED_3713 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_3713 IPR003610 Carbohydrate-binding module family 5/12 AMED_3717 IPR011701 Major facilitator superfamily AMED_3717 IPR020846 Major facilitator superfamily domain AMED_3717 IPR036259 MFS transporter superfamily AMED_3719 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_3719 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_3719 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_3719 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_3721 IPR036318 FAD-binding, type PCMH-like superfamily AMED_3721 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_3721 IPR016166 FAD-binding domain, PCMH-type AMED_3721 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_3721 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_3721 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_3722 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_3722 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_3722 IPR036884 [2Fe-2S]-binding domain superfamily AMED_3722 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3722 IPR002888 [2Fe-2S]-binding AMED_3722 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_3722 IPR012675 Beta-grasp domain superfamily AMED_3723 IPR011701 Major facilitator superfamily AMED_3723 IPR020846 Major facilitator superfamily domain AMED_3723 IPR036259 MFS transporter superfamily AMED_3724 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3724 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3724 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3724 IPR011032 GroES-like superfamily AMED_3724 IPR036291 NAD(P)-binding domain superfamily AMED_3724 IPR027399 Alcohol dehydrogenase GroES-associated AMED_3728 IPR015655 Protein phosphatase 2C family AMED_3728 IPR036457 PPM-type phosphatase domain superfamily AMED_3728 IPR001932 PPM-type phosphatase domain AMED_3734 IPR017853 Glycoside hydrolase superfamily AMED_3734 IPR018077 Glycoside hydrolase, family 25 subgroup AMED_3734 IPR008270 Glycoside hydrolase, family 25, active site AMED_3734 IPR002053 Glycoside hydrolase, family 25 AMED_3737 IPR004680 Citrate transporter-like domain AMED_3737 IPR000802 Arsenical pump membrane protein, ArsB AMED_3738 IPR029058 Alpha/Beta hydrolase fold AMED_3738 IPR024038 MYXO-CTERM domain AMED_3738 IPR010126 Esterase, PHB depolymerase AMED_3739 IPR008928 Six-hairpin glycosidase superfamily AMED_3739 IPR012341 Six-hairpin glycosidase-like superfamily AMED_3739 IPR034116 AGE domain AMED_3739 IPR030875 Sulfoquinovose isomerase AMED_3740 IPR000835 MarR-type HTH domain AMED_3740 IPR000600 ROK family AMED_3740 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3740 IPR036390 Winged helix DNA-binding domain superfamily AMED_3741 IPR000914 Solute-binding protein family 5 domain AMED_3741 IPR030678 Peptide/nickel binding protein, MppA-type AMED_3741 IPR039424 Solute-binding protein family 5 AMED_3741 IPR023765 Solute-binding protein family 5, conserved site AMED_3742 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3742 IPR035906 MetI-like superfamily AMED_3743 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_3743 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3743 IPR003439 ABC transporter-like AMED_3743 IPR003593 AAA+ ATPase domain AMED_3743 IPR017871 ABC transporter, conserved site AMED_3744 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_3744 IPR003439 ABC transporter-like AMED_3744 IPR003593 AAA+ ATPase domain AMED_3744 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3744 IPR017871 ABC transporter, conserved site AMED_3746 IPR000843 LacI-type HTH domain AMED_3746 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_3746 IPR028082 Periplasmic binding protein-like I AMED_3747 IPR026444 Secretion system C-terminal sorting domain AMED_3747 IPR005084 Carbohydrate binding module family 6 AMED_3747 IPR017853 Glycoside hydrolase superfamily AMED_3747 IPR008979 Galactose-binding-like domain superfamily AMED_3747 IPR022790 Glycosyl hydrolase family 26 domain AMED_3747 IPR000805 Glycoside hydrolase family 26 AMED_3749 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3749 IPR036390 Winged helix DNA-binding domain superfamily AMED_3749 IPR000600 ROK family AMED_3750 IPR031705 Glycosyl hydrolase family 36, C-terminal AMED_3750 IPR013785 Aldolase-type TIM barrel AMED_3750 IPR031704 Glycosyl hydrolase family 36, N-terminal AMED_3750 IPR017853 Glycoside hydrolase superfamily AMED_3750 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_3750 IPR002252 Glycoside hydrolase family 36 AMED_3750 IPR038417 Alpha-galactosidase, N-terminal domain superfamily AMED_3751 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3751 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMED_3751 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3751 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3751 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3752 IPR018060 DNA binding HTH domain, AraC-type AMED_3752 IPR011051 RmlC-like cupin domain superfamily AMED_3752 IPR018062 HTH domain AraC-type, conserved site AMED_3752 IPR009057 Homeobox-like domain superfamily AMED_3752 IPR014710 RmlC-like jelly roll fold AMED_3752 IPR020449 Transcription regulator HTH, AraC- type AMED_3752 IPR032783 AraC-type transcription regulator, ligand-binding domain AMED_3754 IPR002938 FAD-binding domain AMED_3754 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3764 IPR036908 RlpA-like domain superfamily AMED_3764 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMED_3766 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3766 IPR039420 Transcriptional regulatory protein WalR-like AMED_3766 IPR001789 Signal transduction response regulator, receiver domain AMED_3766 IPR011006 CheY-like superfamily AMED_3766 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3767 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3767 IPR003660 HAMP domain AMED_3767 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3767 IPR005467 Histidine kinase domain AMED_3767 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_3767 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_3767 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_3769 IPR002656 Acyltransferase 3 AMED_3769 IPR036514 SGNH hydrolase superfamily AMED_3774 IPR029058 Alpha/Beta hydrolase fold AMED_3774 IPR000073 Alpha/beta hydrolase fold-1 AMED_3774 IPR000639 Epoxide hydrolase-like AMED_3774 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AMED_3775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_3775 IPR013216 Methyltransferase type 11 AMED_3775 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMED_3777 IPR001845 HTH ArsR-type DNA-binding domain AMED_3777 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3777 IPR036390 Winged helix DNA-binding domain superfamily AMED_3777 IPR011991 ArsR-like helix-turn-helix domain AMED_3781 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AMED_3781 IPR001821 [NiFe]-hydrogenase, small subunit AMED_3781 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AMED_3781 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily AMED_3781 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AMED_3784 IPR017968 Acylphosphatase, conserved site AMED_3784 IPR036046 Acylphosphatase-like domain superfamily AMED_3784 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMED_3784 IPR041440 HypF, Kae1-like domain AMED_3784 IPR006070 YrdC-like domain AMED_3784 IPR001792 Acylphosphatase-like domain AMED_3784 IPR004421 Carbamoyltransferase, HypF-type AMED_3784 IPR011125 Zinc finger, HypF-type AMED_3785 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMED_3785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3785 IPR004392 Hydrogenase maturation factor HypB AMED_3786 IPR000688 Hydrogenase maturation factor HypA/HybF AMED_3786 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AMED_3787 IPR036921 PurM-like, N-terminal domain superfamily AMED_3787 IPR011854 Carbamoyl dehydratase HypE AMED_3787 IPR016188 PurM-like, N-terminal domain AMED_3787 IPR036676 PurM-like, C-terminal domain superfamily AMED_3787 IPR010918 PurM-like, C-terminal domain AMED_3788 IPR002780 Hydrogenase formation HypD protein AMED_3788 IPR042244 HypD, domain 1 AMED_3788 IPR042243 HypD, domain 2 AMED_3789 IPR037254 HupF/HypC superfamily AMED_3789 IPR019812 Hydrogenase assembly chaperone, conserved site AMED_3789 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AMED_3795 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AMED_3795 IPR029014 [NiFe]-hydrogenase, large subunit AMED_3795 IPR001501 Nickel-dependent hydrogenase, large subunit AMED_3796 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AMED_3796 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AMED_3796 IPR001821 [NiFe]-hydrogenase, small subunit AMED_3796 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily AMED_3796 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AMED_3797 IPR001347 Sugar isomerase (SIS) AMED_3797 IPR035461 GmhA/DiaA AMED_3797 IPR004515 Phosphoheptose isomerase AMED_3799 IPR035461 GmhA/DiaA AMED_3799 IPR004515 Phosphoheptose isomerase AMED_3799 IPR001347 Sugar isomerase (SIS) AMED_3806 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3806 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3806 IPR005158 Bacterial transcriptional activator domain AMED_3806 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3806 IPR013026 Tetratricopeptide repeat-containing domain AMED_3806 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3806 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3806 IPR019734 Tetratricopeptide repeat AMED_3806 IPR002182 NB-ARC AMED_3807 IPR000639 Epoxide hydrolase-like AMED_3807 IPR029058 Alpha/Beta hydrolase fold AMED_3807 IPR000073 Alpha/beta hydrolase fold-1 AMED_3808 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_3808 IPR036291 NAD(P)-binding domain superfamily AMED_3808 IPR029045 ClpP/crotonase-like domain superfamily AMED_3808 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3808 IPR012802 Fatty oxidation complex, alpha subunit FadJ AMED_3808 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_3808 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_3808 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_3808 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3809 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3809 IPR036390 Winged helix DNA-binding domain superfamily AMED_3809 IPR002577 Helix-turn-helix, HxlR type AMED_3813 IPR001647 DNA-binding HTH domain, TetR-type AMED_3813 IPR009057 Homeobox-like domain superfamily AMED_3813 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3814 IPR011032 GroES-like superfamily AMED_3814 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3814 IPR036291 NAD(P)-binding domain superfamily AMED_3814 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3814 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3814 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3814 IPR018201 Beta-ketoacyl synthase, active site AMED_3814 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3814 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3814 IPR020807 Polyketide synthase, dehydratase domain AMED_3814 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3814 IPR014043 Acyl transferase AMED_3814 IPR020843 Polyketide synthase, enoylreductase domain AMED_3814 IPR013968 Polyketide synthase, ketoreductase domain AMED_3814 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3814 IPR016039 Thiolase-like AMED_3814 IPR006162 Phosphopantetheine attachment site AMED_3814 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3814 IPR036736 ACP-like superfamily AMED_3814 IPR009081 Phosphopantetheine binding ACP domain AMED_3815 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_3815 IPR036291 NAD(P)-binding domain superfamily AMED_3815 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3815 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3816 IPR011251 Luciferase-like domain AMED_3816 IPR036661 Luciferase-like domain superfamily AMED_3817 IPR036291 NAD(P)-binding domain superfamily AMED_3817 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3818 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3818 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3818 IPR036291 NAD(P)-binding domain superfamily AMED_3824 IPR003593 AAA+ ATPase domain AMED_3824 IPR017871 ABC transporter, conserved site AMED_3824 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMED_3824 IPR003439 ABC transporter-like AMED_3824 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3825 IPR017871 ABC transporter, conserved site AMED_3825 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMED_3825 IPR003439 ABC transporter-like AMED_3825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3825 IPR003593 AAA+ ATPase domain AMED_3826 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3826 IPR029045 ClpP/crotonase-like domain superfamily AMED_3826 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3826 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3827 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3827 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3827 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3827 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3827 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3827 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3828 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3828 IPR000873 AMP-dependent synthetase/ligase AMED_3828 IPR042099 AMP-dependent synthetase-like superfamily AMED_3828 IPR020845 AMP-binding, conserved site AMED_3829 IPR042171 Acyl-CoA thioesterase, double hotdog domain AMED_3829 IPR003703 Acyl-CoA thioesterase AMED_3829 IPR025652 Acyl-CoA thioesterase II domain AMED_3829 IPR029069 HotDog domain superfamily AMED_3831 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3831 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3831 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3831 IPR029045 ClpP/crotonase-like domain superfamily AMED_3832 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3832 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3832 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3832 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3832 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3832 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3833 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_3833 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_3833 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_3833 IPR015590 Aldehyde dehydrogenase domain AMED_3833 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMED_3833 IPR016161 Aldehyde/histidinol dehydrogenase AMED_3835 IPR023606 CoA-transferase family III domain superfamily AMED_3835 IPR003673 CoA-transferase family III AMED_3836 IPR002155 Thiolase AMED_3836 IPR016039 Thiolase-like AMED_3836 IPR020617 Thiolase, C-terminal AMED_3836 IPR020613 Thiolase, conserved site AMED_3836 IPR020616 Thiolase, N-terminal AMED_3837 IPR013785 Aldolase-type TIM barrel AMED_3837 IPR004136 Nitronate monooxygenase AMED_3838 IPR001279 Metallo-beta-lactamase AMED_3838 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_3839 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_3839 IPR036291 NAD(P)-binding domain superfamily AMED_3839 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_3839 IPR030876 3-sulfolactaldehyde reductase AMED_3839 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMED_3839 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_3839 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_3839 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_3840 IPR015590 Aldehyde dehydrogenase domain AMED_3840 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_3840 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_3840 IPR016161 Aldehyde/histidinol dehydrogenase AMED_3842 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3842 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3842 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_3842 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3842 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3842 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3842 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3844 IPR029069 HotDog domain superfamily AMED_3844 IPR003703 Acyl-CoA thioesterase AMED_3848 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_3848 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3848 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3848 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3848 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3848 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3848 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3852 IPR020617 Thiolase, C-terminal AMED_3852 IPR020610 Thiolase, active site AMED_3852 IPR002155 Thiolase AMED_3852 IPR020613 Thiolase, conserved site AMED_3852 IPR020616 Thiolase, N-terminal AMED_3852 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_3852 IPR012793 Beta-ketoadipyl CoA thiolase AMED_3852 IPR016039 Thiolase-like AMED_3853 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3853 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3853 IPR036291 NAD(P)-binding domain superfamily AMED_3855 IPR016039 Thiolase-like AMED_3855 IPR002155 Thiolase AMED_3855 IPR012805 Acetyl-CoA C-acyltransferase FadA AMED_3855 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_3855 IPR020616 Thiolase, N-terminal AMED_3855 IPR020613 Thiolase, conserved site AMED_3855 IPR020610 Thiolase, active site AMED_3855 IPR020617 Thiolase, C-terminal AMED_3856 IPR029045 ClpP/crotonase-like domain superfamily AMED_3856 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3856 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3856 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3858 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMED_3858 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase AMED_3858 IPR018120 Glycoside hydrolase family 1, active site AMED_3858 IPR017853 Glycoside hydrolase superfamily AMED_3858 IPR001360 Glycoside hydrolase family 1 AMED_3859 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3859 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3859 IPR036291 NAD(P)-binding domain superfamily AMED_3861 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3861 IPR036291 NAD(P)-binding domain superfamily AMED_3861 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_3861 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3862 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3862 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3862 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3862 IPR029045 ClpP/crotonase-like domain superfamily AMED_3863 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3863 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3863 IPR029045 ClpP/crotonase-like domain superfamily AMED_3863 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3864 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3864 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3864 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3864 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3864 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3864 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3865 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3866 IPR042099 AMP-dependent synthetase-like superfamily AMED_3866 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3866 IPR000873 AMP-dependent synthetase/ligase AMED_3866 IPR020845 AMP-binding, conserved site AMED_3869 IPR029069 HotDog domain superfamily AMED_3869 IPR002539 MaoC-like dehydratase domain AMED_3869 IPR039375 Nodulation protein N-like AMED_3870 IPR011711 GntR, C-terminal AMED_3870 IPR000524 Transcription regulator HTH, GntR AMED_3870 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3870 IPR036390 Winged helix DNA-binding domain superfamily AMED_3870 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_3871 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3871 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_3871 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3871 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3871 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3871 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3871 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3874 IPR016161 Aldehyde/histidinol dehydrogenase AMED_3874 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_3874 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_3874 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC AMED_3875 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3875 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3875 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3875 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3875 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3875 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3876 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_3876 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_3876 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_3876 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_3876 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_3876 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_3877 IPR029045 ClpP/crotonase-like domain superfamily AMED_3877 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_3877 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3877 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_3878 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3878 IPR036390 Winged helix DNA-binding domain superfamily AMED_3878 IPR011663 UbiC transcription regulator-associated AMED_3878 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_3878 IPR000524 Transcription regulator HTH, GntR AMED_3879 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3879 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3879 IPR036291 NAD(P)-binding domain superfamily AMED_3880 IPR006390 Dihydropteroate synthase AMED_3880 IPR011005 Dihydropteroate synthase-like AMED_3880 IPR000489 Pterin-binding domain AMED_3881 IPR000873 AMP-dependent synthetase/ligase AMED_3881 IPR020845 AMP-binding, conserved site AMED_3881 IPR042099 AMP-dependent synthetase-like superfamily AMED_3881 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3884 IPR000073 Alpha/beta hydrolase fold-1 AMED_3884 IPR029058 Alpha/Beta hydrolase fold AMED_3886 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3886 IPR009057 Homeobox-like domain superfamily AMED_3886 IPR001647 DNA-binding HTH domain, TetR-type AMED_3887 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_3887 IPR014614 Uncharacterised conserved protein UCP036654 AMED_3887 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3888 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_3888 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_3889 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3889 IPR019734 Tetratricopeptide repeat AMED_3889 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3889 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3889 IPR002182 NB-ARC AMED_3889 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3889 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3889 IPR013026 Tetratricopeptide repeat-containing domain AMED_3889 IPR005158 Bacterial transcriptional activator domain AMED_3893 IPR023950 Flavohemoprotein AMED_3893 IPR017938 Riboflavin synthase-like beta-barrel AMED_3893 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_3893 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_3893 IPR000971 Globin AMED_3893 IPR009050 Globin-like superfamily AMED_3893 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_3893 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_3893 IPR012292 Globin/Protoglobin AMED_3893 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_3894 IPR000600 ROK family AMED_3894 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3894 IPR036390 Winged helix DNA-binding domain superfamily AMED_3895 IPR027443 Isopenicillin N synthase-like AMED_3895 IPR010856 Protein of unknown function DUF1479 AMED_3897 IPR002933 Peptidase M20 AMED_3897 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AMED_3897 IPR036264 Bacterial exopeptidase dimerisation domain AMED_3897 IPR011650 Peptidase M20, dimerisation domain AMED_3899 IPR002293 Amino acid/polyamine transporter I AMED_3900 IPR012341 Six-hairpin glycosidase-like superfamily AMED_3900 IPR011613 GH15-like domain AMED_3900 IPR008928 Six-hairpin glycosidase superfamily AMED_3901 IPR004638 Drug resistance transporter EmrB-like AMED_3901 IPR011701 Major facilitator superfamily AMED_3901 IPR036259 MFS transporter superfamily AMED_3901 IPR020846 Major facilitator superfamily domain AMED_3903 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3903 IPR011006 CheY-like superfamily AMED_3903 IPR001789 Signal transduction response regulator, receiver domain AMED_3903 IPR000792 Transcription regulator LuxR, C-terminal AMED_3909 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3909 IPR016236 Serine/threonine-protein kinase PknK, predicted AMED_3909 IPR017441 Protein kinase, ATP binding site AMED_3909 IPR000719 Protein kinase domain AMED_3909 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3909 IPR011009 Protein kinase-like domain superfamily AMED_3909 IPR041664 Orc1-like, AAA ATPase domain AMED_3910 IPR002549 Transmembrane protein TqsA-like AMED_3912 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AMED_3912 IPR019893 PQQ-dependent dehydrogenase, s-GDH family AMED_3912 IPR012938 Glucose/Sorbosone dehydrogenase AMED_3912 IPR011042 Six-bladed beta-propeller, TolB-like AMED_3913 IPR001088 Glycoside hydrolase, family 4 AMED_3913 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AMED_3913 IPR019802 Glycoside hydrolase, family 4, conserved site AMED_3913 IPR036291 NAD(P)-binding domain superfamily AMED_3913 IPR022616 Glycosyl hydrolase, family 4, C-terminal AMED_3914 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3914 IPR035906 MetI-like superfamily AMED_3915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3915 IPR035906 MetI-like superfamily AMED_3918 IPR036390 Winged helix DNA-binding domain superfamily AMED_3918 IPR014036 DeoR C-terminal sensor domain AMED_3918 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMED_3918 IPR037171 NagB/RpiA transferase-like AMED_3918 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3918 IPR001034 DeoR-type HTH domain AMED_3919 IPR014180 Sugar isomerase, AgaS AMED_3919 IPR035464 AgaS, SIS domain AMED_3919 IPR001347 Sugar isomerase (SIS) AMED_3919 IPR035466 GlmS/AgaS, SIS domain 1 AMED_3922 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_3922 IPR017583 Tagatose/fructose phosphokinase AMED_3922 IPR029056 Ribokinase-like AMED_3922 IPR011611 Carbohydrate kinase PfkB AMED_3922 IPR005926 Tagatose-6-phosphate kinase AMED_3923 IPR000771 Fructose-bisphosphate aldolase, class-II AMED_3923 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 AMED_3923 IPR013785 Aldolase-type TIM barrel AMED_3926 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3926 IPR036291 NAD(P)-binding domain superfamily AMED_3926 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3926 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3926 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3926 IPR016039 Thiolase-like AMED_3926 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3926 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3926 IPR013968 Polyketide synthase, ketoreductase domain AMED_3926 IPR009081 Phosphopantetheine binding ACP domain AMED_3926 IPR020807 Polyketide synthase, dehydratase domain AMED_3926 IPR036736 ACP-like superfamily AMED_3926 IPR006162 Phosphopantetheine attachment site AMED_3926 IPR018201 Beta-ketoacyl synthase, active site AMED_3926 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3926 IPR014043 Acyl transferase AMED_3926 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3926 IPR001227 Acyl transferase domain superfamily AMED_3927 IPR036396 Cytochrome P450 superfamily AMED_3927 IPR001128 Cytochrome P450 AMED_3927 IPR017972 Cytochrome P450, conserved site AMED_3927 IPR002397 Cytochrome P450, B-class AMED_3929 IPR001227 Acyl transferase domain superfamily AMED_3929 IPR036736 ACP-like superfamily AMED_3929 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3929 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3929 IPR011032 GroES-like superfamily AMED_3929 IPR018201 Beta-ketoacyl synthase, active site AMED_3929 IPR016039 Thiolase-like AMED_3929 IPR006162 Phosphopantetheine attachment site AMED_3929 IPR009081 Phosphopantetheine binding ACP domain AMED_3929 IPR015357 Erythronolide synthase, docking AMED_3929 IPR020843 Polyketide synthase, enoylreductase domain AMED_3929 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3929 IPR020807 Polyketide synthase, dehydratase domain AMED_3929 IPR036347 Erythronolide synthase, docking domain superfamily AMED_3929 IPR013968 Polyketide synthase, ketoreductase domain AMED_3929 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3929 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3929 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3929 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3929 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_3929 IPR036291 NAD(P)-binding domain superfamily AMED_3929 IPR015083 Polyketide synthase, docking domain AMED_3929 IPR014043 Acyl transferase AMED_3929 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_3930 IPR039425 RNA polymerase sigma-70 like AMED_3930 IPR032710 NTF2-like domain superfamily AMED_3930 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_3930 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_3930 IPR014284 RNA polymerase sigma-70 like domain AMED_3930 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3930 IPR037401 SnoaL-like domain AMED_3930 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_3930 IPR007627 RNA polymerase sigma-70 region 2 AMED_3930 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_3930 IPR013325 RNA polymerase sigma factor, region 2 AMED_3931 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_3931 IPR013783 Immunoglobulin-like fold AMED_3931 IPR003961 Fibronectin type III AMED_3931 IPR036966 Carbohydrate-binding module 3 superfamily AMED_3931 IPR001956 Carbohydrate-binding module 3 AMED_3931 IPR001919 Carbohydrate-binding type-2 domain AMED_3931 IPR012341 Six-hairpin glycosidase-like superfamily AMED_3931 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_3931 IPR008928 Six-hairpin glycosidase superfamily AMED_3931 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites AMED_3931 IPR018366 Carbohydrate-binding type-2, conserved site AMED_3931 IPR018221 Glycoside hydrolase family 9, His active site AMED_3931 IPR001701 Glycoside hydrolase family 9 AMED_3931 IPR036116 Fibronectin type III superfamily AMED_3935 IPR010497 Epoxide hydrolase, N-terminal AMED_3935 IPR016292 Epoxide hydrolase AMED_3935 IPR029058 Alpha/Beta hydrolase fold AMED_3935 IPR000639 Epoxide hydrolase-like AMED_3935 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3937 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type AMED_3937 IPR001753 Enoyl-CoA hydratase/isomerase AMED_3937 IPR011034 Formyl transferase-like, C-terminal domain superfamily AMED_3937 IPR002376 Formyl transferase, N-terminal AMED_3937 IPR036477 Formyl transferase, N-terminal domain superfamily AMED_3937 IPR029045 ClpP/crotonase-like domain superfamily AMED_3937 IPR005793 Formyl transferase, C-terminal AMED_3938 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_3938 IPR019734 Tetratricopeptide repeat AMED_3938 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3938 IPR016032 Signal transduction response regulator, C-terminal effector AMED_3938 IPR013026 Tetratricopeptide repeat-containing domain AMED_3938 IPR005158 Bacterial transcriptional activator domain AMED_3938 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3938 IPR002182 NB-ARC AMED_3938 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_3940 IPR017871 ABC transporter, conserved site AMED_3940 IPR039421 Type I protein exporter AMED_3940 IPR011917 ABC transporter, lipid A export, MsbA AMED_3940 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3940 IPR003439 ABC transporter-like AMED_3940 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_3940 IPR003593 AAA+ ATPase domain AMED_3940 IPR011527 ABC transporter type 1, transmembrane domain AMED_3945 IPR011789 Cu(I)-responsive transcriptional regulator AMED_3945 IPR009061 Putative DNA-binding domain superfamily AMED_3945 IPR000551 MerR-type HTH domain AMED_3945 IPR015358 Transcription regulator MerR, DNA binding AMED_3946 IPR000873 AMP-dependent synthetase/ligase AMED_3946 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 AMED_3946 IPR042099 AMP-dependent synthetase-like superfamily AMED_3946 IPR020845 AMP-binding, conserved site AMED_3946 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3950 IPR036291 NAD(P)-binding domain superfamily AMED_3950 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_3950 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3951 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_3951 IPR034593 Mandelate racemase-like AMED_3951 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AMED_3951 IPR029065 Enolase C-terminal domain-like AMED_3951 IPR029017 Enolase-like, N-terminal AMED_3951 IPR036849 Enolase-like, C-terminal domain superfamily AMED_3951 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_3951 IPR034589 D-mannonate dehydratase-like AMED_3952 IPR035906 MetI-like superfamily AMED_3952 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3953 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_3953 IPR035906 MetI-like superfamily AMED_3954 IPR006061 Solute-binding family 1, conserved site AMED_3954 IPR006059 Bacterial extracellular solute-binding protein AMED_3955 IPR011711 GntR, C-terminal AMED_3955 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_3955 IPR000524 Transcription regulator HTH, GntR AMED_3955 IPR036390 Winged helix DNA-binding domain superfamily AMED_3955 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3957 IPR004276 Glycosyltransferase family 28, N-terminal domain AMED_3960 IPR001128 Cytochrome P450 AMED_3960 IPR002397 Cytochrome P450, B-class AMED_3960 IPR017972 Cytochrome P450, conserved site AMED_3960 IPR036396 Cytochrome P450 superfamily AMED_3961 IPR042098 Taurine dioxygenase TauD-like superfamily AMED_3961 IPR006189 CHASE domain AMED_3961 IPR003819 TauD/TfdA-like domain AMED_3962 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3962 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_3962 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3962 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_3962 IPR036736 ACP-like superfamily AMED_3962 IPR036291 NAD(P)-binding domain superfamily AMED_3962 IPR018201 Beta-ketoacyl synthase, active site AMED_3962 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_3962 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_3962 IPR001242 Condensation domain AMED_3962 IPR020845 AMP-binding, conserved site AMED_3962 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3962 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_3962 IPR013968 Polyketide synthase, ketoreductase domain AMED_3962 IPR009081 Phosphopantetheine binding ACP domain AMED_3962 IPR006162 Phosphopantetheine attachment site AMED_3962 IPR016039 Thiolase-like AMED_3962 IPR000873 AMP-dependent synthetase/ligase AMED_3962 IPR042099 AMP-dependent synthetase-like superfamily AMED_3962 IPR010071 Amino acid adenylation domain AMED_3962 IPR020807 Polyketide synthase, dehydratase domain AMED_3963 IPR036736 ACP-like superfamily AMED_3963 IPR029058 Alpha/Beta hydrolase fold AMED_3963 IPR010071 Amino acid adenylation domain AMED_3963 IPR000873 AMP-dependent synthetase/ligase AMED_3963 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3963 IPR042099 AMP-dependent synthetase-like superfamily AMED_3963 IPR020845 AMP-binding, conserved site AMED_3963 IPR001242 Condensation domain AMED_3963 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_3963 IPR020802 Polyketide synthase, thioesterase domain AMED_3963 IPR001031 Thioesterase AMED_3963 IPR009081 Phosphopantetheine binding ACP domain AMED_3963 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_3964 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_3964 IPR036291 NAD(P)-binding domain superfamily AMED_3965 IPR001647 DNA-binding HTH domain, TetR-type AMED_3965 IPR009057 Homeobox-like domain superfamily AMED_3965 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3971 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_3971 IPR002938 FAD-binding domain AMED_3973 IPR036390 Winged helix DNA-binding domain superfamily AMED_3973 IPR000600 ROK family AMED_3973 IPR022687 DTXR-type HTH domain AMED_3973 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3974 IPR000600 ROK family AMED_3974 IPR036390 Winged helix DNA-binding domain superfamily AMED_3974 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_3974 IPR000835 MarR-type HTH domain AMED_3975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_3975 IPR003593 AAA+ ATPase domain AMED_3975 IPR015861 ABC transporter, ribose import, RbsA AMED_3975 IPR017871 ABC transporter, conserved site AMED_3975 IPR003439 ABC transporter-like AMED_3976 IPR001851 ABC transporter, permease AMED_3978 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3978 IPR000683 Oxidoreductase, N-terminal AMED_3978 IPR036291 NAD(P)-binding domain superfamily AMED_3978 IPR004104 Oxidoreductase, C-terminal AMED_3978 IPR008354 Glucose-fructose oxidoreductase, bacterial AMED_3980 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3980 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3980 IPR011032 GroES-like superfamily AMED_3980 IPR036291 NAD(P)-binding domain superfamily AMED_3980 IPR014188 Acrylyl-CoA reductase AcuI AMED_3980 IPR020843 Polyketide synthase, enoylreductase domain AMED_3981 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3981 IPR001647 DNA-binding HTH domain, TetR-type AMED_3981 IPR009057 Homeobox-like domain superfamily AMED_3990 IPR001647 DNA-binding HTH domain, TetR-type AMED_3990 IPR009057 Homeobox-like domain superfamily AMED_3990 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_3990 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_3990 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3992 IPR018366 Carbohydrate-binding type-2, conserved site AMED_3992 IPR016288 1, 4-beta cellobiohydrolase AMED_3992 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_3992 IPR001524 Glycoside hydrolase, family 6, conserved site AMED_3992 IPR001919 Carbohydrate-binding type-2 domain AMED_3992 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_3992 IPR036434 1, 4-beta cellobiohydrolase superfamily AMED_3993 IPR031158 Glycosyl hydrolases family 10, active site AMED_3993 IPR001000 Glycoside hydrolase family 10 domain AMED_3993 IPR017853 Glycoside hydrolase superfamily AMED_3993 IPR035992 Ricin B-like lectins AMED_3993 IPR000772 Ricin B, lectin domain AMED_3994 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_3994 IPR000772 Ricin B, lectin domain AMED_3994 IPR035992 Ricin B-like lectins AMED_3994 IPR037398 Glucan endo-1,3-beta-glucosidase AMED_3994 IPR032477 Beta-1,3-glucanase, N-terminal AMED_3994 IPR037176 Osmotin/thaumatin-like superfamily AMED_3995 IPR031158 Glycosyl hydrolases family 10, active site AMED_3995 IPR017853 Glycoside hydrolase superfamily AMED_3995 IPR035992 Ricin B-like lectins AMED_3995 IPR000772 Ricin B, lectin domain AMED_3995 IPR001000 Glycoside hydrolase family 10 domain AMED_3996 IPR013149 Alcohol dehydrogenase, C-terminal AMED_3996 IPR020843 Polyketide synthase, enoylreductase domain AMED_3996 IPR036291 NAD(P)-binding domain superfamily AMED_3996 IPR011032 GroES-like superfamily AMED_3996 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_3996 IPR013154 Alcohol dehydrogenase, N-terminal AMED_3997 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_3997 IPR041467 HTH-type transcriptional repressor Sco4008, C-terminal AMED_3997 IPR009057 Homeobox-like domain superfamily AMED_3997 IPR001647 DNA-binding HTH domain, TetR-type AMED_3998 IPR042099 AMP-dependent synthetase-like superfamily AMED_3998 IPR000873 AMP-dependent synthetase/ligase AMED_3998 IPR020845 AMP-binding, conserved site AMED_3998 IPR025110 AMP-binding enzyme, C-terminal domain AMED_3999 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_3999 IPR003594 Histidine kinase/HSP90-like ATPase AMED_3999 IPR029016 GAF-like domain superfamily AMED_3999 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_3999 IPR003018 GAF domain AMED_4000 IPR020846 Major facilitator superfamily domain AMED_4000 IPR005828 Major facilitator, sugar transporter-like AMED_4000 IPR036259 MFS transporter superfamily AMED_4000 IPR005829 Sugar transporter, conserved site AMED_4001 IPR011118 Tannase/feruloyl esterase AMED_4001 IPR029058 Alpha/Beta hydrolase fold AMED_4002 IPR019800 Glycoside hydrolase, family 3, active site AMED_4002 IPR026891 Fibronectin type III-like domain AMED_4002 IPR017853 Glycoside hydrolase superfamily AMED_4002 IPR013783 Immunoglobulin-like fold AMED_4002 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_4002 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_4002 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_4002 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_4005 IPR035992 Ricin B-like lectins AMED_4005 IPR000772 Ricin B, lectin domain AMED_4005 IPR001000 Glycoside hydrolase family 10 domain AMED_4005 IPR031158 Glycosyl hydrolases family 10, active site AMED_4005 IPR017853 Glycoside hydrolase superfamily AMED_4006 IPR012914 Purine catabolism PurC-like domain AMED_4006 IPR025736 PucR C-terminal helix-turn-helix domain AMED_4006 IPR041522 CdaR, GGDEF-like domain AMED_4006 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_4007 IPR036736 ACP-like superfamily AMED_4007 IPR009081 Phosphopantetheine binding ACP domain AMED_4007 IPR003231 Acyl carrier protein (ACP) AMED_4008 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4008 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4008 IPR016039 Thiolase-like AMED_4008 IPR000794 Beta-ketoacyl synthase AMED_4008 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4009 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMED_4009 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMED_4009 IPR016039 Thiolase-like AMED_4009 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMED_4010 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4010 IPR001173 Glycosyltransferase 2-like AMED_4010 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AMED_4011 IPR002397 Cytochrome P450, B-class AMED_4011 IPR017972 Cytochrome P450, conserved site AMED_4011 IPR036396 Cytochrome P450 superfamily AMED_4011 IPR001128 Cytochrome P450 AMED_4012 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4012 IPR042099 AMP-dependent synthetase-like superfamily AMED_4012 IPR000873 AMP-dependent synthetase/ligase AMED_4012 IPR020845 AMP-binding, conserved site AMED_4014 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4014 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4014 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4014 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4014 IPR005158 Bacterial transcriptional activator domain AMED_4015 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4015 IPR036390 Winged helix DNA-binding domain superfamily AMED_4015 IPR005119 LysR, substrate-binding AMED_4015 IPR000847 Transcription regulator HTH, LysR AMED_4017 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4017 IPR036291 NAD(P)-binding domain superfamily AMED_4017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_4017 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4019 IPR036291 NAD(P)-binding domain superfamily AMED_4019 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4020 IPR036390 Winged helix DNA-binding domain superfamily AMED_4020 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4020 IPR000835 MarR-type HTH domain AMED_4020 IPR011991 ArsR-like helix-turn-helix domain AMED_4021 IPR002182 NB-ARC AMED_4021 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4021 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4021 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4021 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4021 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4021 IPR019734 Tetratricopeptide repeat AMED_4021 IPR005158 Bacterial transcriptional activator domain AMED_4021 IPR013026 Tetratricopeptide repeat-containing domain AMED_4022 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMED_4022 IPR016039 Thiolase-like AMED_4022 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMED_4022 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMED_4023 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_4023 IPR029066 PLP-binding barrel AMED_4023 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_4023 IPR002986 Diaminopimelate decarboxylase, LysA AMED_4023 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_4023 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMED_4023 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_4025 IPR011006 CheY-like superfamily AMED_4025 IPR001789 Signal transduction response regulator, receiver domain AMED_4025 IPR000792 Transcription regulator LuxR, C-terminal AMED_4025 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4027 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4027 IPR003439 ABC transporter-like AMED_4027 IPR025857 MacB-like periplasmic core domain AMED_4027 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_4027 IPR003838 ABC transporter permease protein domain AMED_4027 IPR017871 ABC transporter, conserved site AMED_4027 IPR003593 AAA+ ATPase domain AMED_4033 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_4033 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA AMED_4033 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_4033 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMED_4034 IPR010071 Amino acid adenylation domain AMED_4034 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4034 IPR010060 Non-ribosomal peptide synthase AMED_4034 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4034 IPR010060 Non-ribosomal peptide synthase AMED_4034 IPR001242 Condensation domain AMED_4034 IPR036736 ACP-like superfamily AMED_4034 IPR042099 AMP-dependent synthetase-like superfamily AMED_4034 IPR000873 AMP-dependent synthetase/ligase AMED_4034 IPR001242 Condensation domain AMED_4034 IPR020845 AMP-binding, conserved site AMED_4034 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4034 IPR000873 AMP-dependent synthetase/ligase AMED_4034 IPR042099 AMP-dependent synthetase-like superfamily AMED_4034 IPR036736 ACP-like superfamily AMED_4034 IPR010071 Amino acid adenylation domain AMED_4034 IPR006162 Phosphopantetheine attachment site AMED_4034 IPR020845 AMP-binding, conserved site AMED_4034 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4034 IPR006162 Phosphopantetheine attachment site AMED_4034 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4034 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4034 IPR009081 Phosphopantetheine binding ACP domain AMED_4034 IPR009081 Phosphopantetheine binding ACP domain AMED_4036 IPR037407 MbtH-like protein AMED_4036 IPR038020 MbtH-like domain superfamily AMED_4036 IPR005153 MbtH-like domain AMED_4037 IPR017871 ABC transporter, conserved site AMED_4037 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4037 IPR025302 Domain of unknown function DUF4162 AMED_4037 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_4037 IPR003439 ABC transporter-like AMED_4037 IPR003593 AAA+ ATPase domain AMED_4039 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMED_4039 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_4039 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_4039 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA AMED_4041 IPR011761 ATP-grasp fold AMED_4041 IPR003806 ATP-grasp fold, PylC-type AMED_4042 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_4042 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4042 IPR036291 NAD(P)-binding domain superfamily AMED_4042 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4044 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4044 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4044 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AMED_4044 IPR016039 Thiolase-like AMED_4044 IPR018201 Beta-ketoacyl synthase, active site AMED_4044 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4044 IPR000794 Beta-ketoacyl synthase AMED_4045 IPR009081 Phosphopantetheine binding ACP domain AMED_4045 IPR036736 ACP-like superfamily AMED_4046 IPR013026 Tetratricopeptide repeat-containing domain AMED_4046 IPR019734 Tetratricopeptide repeat AMED_4046 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4046 IPR005158 Bacterial transcriptional activator domain AMED_4046 IPR002182 NB-ARC AMED_4046 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4046 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4046 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4046 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4047 IPR038662 F1F0 ATP synthase subunit C superfamily AMED_4047 IPR002379 V-ATPase proteolipid subunit C-like domain AMED_4047 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AMED_4047 IPR035921 F/V-ATP synthase subunit C superfamily AMED_4047 IPR000454 ATP synthase, F0 complex, subunit C AMED_4051 IPR029058 Alpha/Beta hydrolase fold AMED_4051 IPR010126 Esterase, PHB depolymerase AMED_4051 IPR024038 MYXO-CTERM domain AMED_4052 IPR003660 HAMP domain AMED_4052 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4052 IPR005467 Histidine kinase domain AMED_4052 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_4052 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_4052 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_4052 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4053 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4053 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4053 IPR011006 CheY-like superfamily AMED_4053 IPR001789 Signal transduction response regulator, receiver domain AMED_4053 IPR039420 Transcriptional regulatory protein WalR-like AMED_4054 IPR012338 Beta-lactamase/transpeptidase-like AMED_4054 IPR001466 Beta-lactamase-related AMED_4055 IPR020583 Inositol monophosphatase, metal-binding site AMED_4055 IPR022337 Inositol monophosphatase, SuhB AMED_4055 IPR020550 Inositol monophosphatase, conserved site AMED_4055 IPR000760 Inositol monophosphatase-like AMED_4055 IPR033942 Inositol monophosphatase AMED_4056 IPR036390 Winged helix DNA-binding domain superfamily AMED_4056 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4056 IPR000847 Transcription regulator HTH, LysR AMED_4056 IPR005119 LysR, substrate-binding AMED_4059 IPR020846 Major facilitator superfamily domain AMED_4059 IPR005828 Major facilitator, sugar transporter-like AMED_4059 IPR036259 MFS transporter superfamily AMED_4059 IPR005829 Sugar transporter, conserved site AMED_4061 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_4061 IPR022694 3-hydroxyacyl-CoA dehydrogenase AMED_4061 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_4061 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_4061 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_4061 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_4061 IPR036291 NAD(P)-binding domain superfamily AMED_4063 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_4063 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_4063 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_4063 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_4063 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_4063 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_4063 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_4065 IPR020845 AMP-binding, conserved site AMED_4065 IPR010071 Amino acid adenylation domain AMED_4065 IPR006162 Phosphopantetheine attachment site AMED_4065 IPR036736 ACP-like superfamily AMED_4065 IPR000873 AMP-dependent synthetase/ligase AMED_4065 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4065 IPR009081 Phosphopantetheine binding ACP domain AMED_4065 IPR042099 AMP-dependent synthetase-like superfamily AMED_4065 IPR010060 Non-ribosomal peptide synthase AMED_4065 IPR001242 Condensation domain AMED_4065 IPR010060 Non-ribosomal peptide synthase AMED_4065 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4065 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4065 IPR009081 Phosphopantetheine binding ACP domain AMED_4065 IPR006162 Phosphopantetheine attachment site AMED_4065 IPR010071 Amino acid adenylation domain AMED_4065 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4065 IPR020845 AMP-binding, conserved site AMED_4065 IPR000873 AMP-dependent synthetase/ligase AMED_4065 IPR042099 AMP-dependent synthetase-like superfamily AMED_4065 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4065 IPR001242 Condensation domain AMED_4065 IPR036736 ACP-like superfamily AMED_4065 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4066 IPR010060 Non-ribosomal peptide synthase AMED_4066 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4066 IPR020845 AMP-binding, conserved site AMED_4066 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4066 IPR042099 AMP-dependent synthetase-like superfamily AMED_4066 IPR000873 AMP-dependent synthetase/ligase AMED_4066 IPR001242 Condensation domain AMED_4066 IPR010071 Amino acid adenylation domain AMED_4066 IPR020845 AMP-binding, conserved site AMED_4066 IPR009081 Phosphopantetheine binding ACP domain AMED_4066 IPR036736 ACP-like superfamily AMED_4066 IPR009081 Phosphopantetheine binding ACP domain AMED_4066 IPR006162 Phosphopantetheine attachment site AMED_4066 IPR036736 ACP-like superfamily AMED_4066 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4066 IPR010060 Non-ribosomal peptide synthase AMED_4066 IPR001242 Condensation domain AMED_4066 IPR006162 Phosphopantetheine attachment site AMED_4066 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4066 IPR000873 AMP-dependent synthetase/ligase AMED_4066 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4066 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4066 IPR042099 AMP-dependent synthetase-like superfamily AMED_4066 IPR010071 Amino acid adenylation domain AMED_4067 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AMED_4067 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AMED_4067 IPR016039 Thiolase-like AMED_4067 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMED_4069 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site AMED_4069 IPR014105 Carotenoid/retinoid oxidoreductase AMED_4069 IPR002937 Amine oxidase AMED_4069 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4070 IPR002937 Amine oxidase AMED_4070 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4071 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_4071 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4071 IPR004033 UbiE/COQ5 methyltransferase AMED_4074 IPR019845 Squalene/phytoene synthase, conserved site AMED_4074 IPR008949 Isoprenoid synthase domain superfamily AMED_4074 IPR002060 Squalene/phytoene synthase AMED_4074 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head AMED_4075 IPR002937 Amine oxidase AMED_4075 IPR014105 Carotenoid/retinoid oxidoreductase AMED_4075 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site AMED_4075 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4076 IPR033749 Polyprenyl synthetase, conserved site AMED_4076 IPR000092 Polyprenyl synthetase AMED_4076 IPR008949 Isoprenoid synthase domain superfamily AMED_4079 IPR014105 Carotenoid/retinoid oxidoreductase AMED_4079 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4079 IPR002937 Amine oxidase AMED_4080 IPR000462 CDP-alcohol phosphatidyltransferase AMED_4085 IPR035906 MetI-like superfamily AMED_4085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4086 IPR035906 MetI-like superfamily AMED_4086 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4088 IPR028082 Periplasmic binding protein-like I AMED_4088 IPR000843 LacI-type HTH domain AMED_4088 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4092 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_4092 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_4092 IPR013783 Immunoglobulin-like fold AMED_4092 IPR036116 Fibronectin type III superfamily AMED_4092 IPR017853 Glycoside hydrolase superfamily AMED_4092 IPR018366 Carbohydrate-binding type-2, conserved site AMED_4092 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_4092 IPR001579 Glycoside hydrolase, chitinase active site AMED_4092 IPR001919 Carbohydrate-binding type-2 domain AMED_4092 IPR003961 Fibronectin type III AMED_4092 IPR029070 Chitinase insertion domain superfamily AMED_4092 IPR011583 Chitinase II AMED_4094 IPR011115 SecA DEAD-like, N-terminal AMED_4094 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4094 IPR000185 Protein translocase subunit SecA AMED_4094 IPR014018 SecA motor DEAD AMED_4094 IPR020937 SecA conserved site AMED_4094 IPR004027 SEC-C motif AMED_4094 IPR011130 SecA, preprotein cross-linking domain AMED_4094 IPR011116 SecA Wing/Scaffold AMED_4094 IPR036266 SecA, Wing/Scaffold superfamily AMED_4094 IPR036670 SecA, preprotein cross-linking domain superfamily AMED_4097 IPR018366 Carbohydrate-binding type-2, conserved site AMED_4097 IPR001547 Glycoside hydrolase, family 5 AMED_4097 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_4097 IPR017853 Glycoside hydrolase superfamily AMED_4097 IPR001919 Carbohydrate-binding type-2 domain AMED_4097 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_4097 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_4099 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4099 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4099 IPR000700 PAS-associated, C-terminal AMED_4099 IPR002645 STAS domain AMED_4099 IPR001932 PPM-type phosphatase domain AMED_4099 IPR036457 PPM-type phosphatase domain superfamily AMED_4099 IPR036513 STAS domain superfamily AMED_4099 IPR013656 PAS fold-4 AMED_4099 IPR035965 PAS domain superfamily AMED_4099 IPR000014 PAS domain AMED_4101 IPR000073 Alpha/beta hydrolase fold-1 AMED_4101 IPR029058 Alpha/Beta hydrolase fold AMED_4103 IPR011251 Luciferase-like domain AMED_4103 IPR036661 Luciferase-like domain superfamily AMED_4105 IPR019793 Peroxidases heam-ligand binding site AMED_4105 IPR019794 Peroxidase, active site AMED_4105 IPR010255 Haem peroxidase superfamily AMED_4105 IPR000763 Catalase-peroxidase haem AMED_4105 IPR002016 Haem peroxidase AMED_4106 IPR036390 Winged helix DNA-binding domain superfamily AMED_4106 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4106 IPR002481 Ferric-uptake regulator AMED_4107 IPR020940 Thymidylate synthase, active site AMED_4107 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AMED_4107 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AMED_4107 IPR000398 Thymidylate synthase AMED_4108 IPR001796 Dihydrofolate reductase domain AMED_4108 IPR017925 Dihydrofolate reductase conserved site AMED_4108 IPR012259 Dihydrofolate reductase AMED_4108 IPR024072 Dihydrofolate reductase-like domain superfamily AMED_4109 IPR027424 Glucose Oxidase, domain 2 AMED_4109 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_4109 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_4109 IPR011533 Oxygen-dependent choline dehydrogenase AMED_4109 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4109 IPR012132 Glucose-methanol-choline oxidoreductase AMED_4110 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_4110 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_4110 IPR016161 Aldehyde/histidinol dehydrogenase AMED_4110 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_4110 IPR015590 Aldehyde dehydrogenase domain AMED_4111 IPR001736 Phospholipase D/Transphosphatidylase AMED_4111 IPR025202 Phospholipase D-like domain AMED_4111 IPR030872 Cardiolipin synthase B AMED_4113 IPR017938 Riboflavin synthase-like beta-barrel AMED_4113 IPR000951 Phthalate dioxygenase reductase AMED_4113 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_4113 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_4113 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_4113 IPR012675 Beta-grasp domain superfamily AMED_4113 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_4113 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_4113 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_4115 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_4115 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_4115 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AMED_4117 IPR012348 Ribonucleotide reductase-like AMED_4117 IPR009078 Ferritin-like superfamily AMED_4117 IPR005067 Fatty acid desaturase, type 2 AMED_4118 IPR017853 Glycoside hydrolase superfamily AMED_4118 IPR011395 Alpha glucuronidase AMED_4118 IPR005154 Alpha glucuronidase, N-terminal AMED_4118 IPR011099 Glycosyl hydrolase family 67, C-terminal AMED_4118 IPR011100 Glycosyl hydrolase family 67, catalytic domain AMED_4118 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily AMED_4118 IPR029018 Beta-hexosaminidase-like, domain 2 AMED_4121 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4121 IPR036291 NAD(P)-binding domain superfamily AMED_4121 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4130 IPR035909 Methylesterase CheB, C-terminal AMED_4130 IPR011006 CheY-like superfamily AMED_4130 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_4130 IPR001789 Signal transduction response regulator, receiver domain AMED_4130 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AMED_4131 IPR001789 Signal transduction response regulator, receiver domain AMED_4131 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_4131 IPR011006 CheY-like superfamily AMED_4131 IPR035909 Methylesterase CheB, C-terminal AMED_4131 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AMED_4133 IPR013656 PAS fold-4 AMED_4133 IPR035965 PAS domain superfamily AMED_4133 IPR000014 PAS domain AMED_4133 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMED_4133 IPR000780 MCP methyltransferase, CheR-type AMED_4133 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMED_4133 IPR035909 Methylesterase CheB, C-terminal AMED_4133 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4133 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_4135 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMED_4135 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMED_4135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_4135 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AMED_4135 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AMED_4135 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AMED_4144 IPR020846 Major facilitator superfamily domain AMED_4144 IPR011701 Major facilitator superfamily AMED_4144 IPR004638 Drug resistance transporter EmrB-like AMED_4144 IPR005829 Sugar transporter, conserved site AMED_4144 IPR036259 MFS transporter superfamily AMED_4147 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_4147 IPR007061 Protein of unknown function DUF664 AMED_4148 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_4148 IPR012310 DNA ligase, ATP-dependent, central AMED_4148 IPR012340 Nucleic acid-binding, OB-fold AMED_4153 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMED_4153 IPR036627 CobW-like, C-terminal domain superfamily AMED_4153 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4153 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMED_4153 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW AMED_4154 IPR017142 Nitric oxide synthase, oxygenase subunit AMED_4154 IPR036119 Nitric oxide synthase, N-terminal domain superfamily AMED_4154 IPR004030 Nitric oxide synthase, N-terminal AMED_4156 IPR005829 Sugar transporter, conserved site AMED_4156 IPR011701 Major facilitator superfamily AMED_4156 IPR020846 Major facilitator superfamily domain AMED_4156 IPR036259 MFS transporter superfamily AMED_4158 IPR018383 Uncharacterised protein family UPF0324, prokaryote AMED_4159 IPR036390 Winged helix DNA-binding domain superfamily AMED_4159 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4159 IPR005119 LysR, substrate-binding AMED_4159 IPR000847 Transcription regulator HTH, LysR AMED_4160 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4160 IPR036390 Winged helix DNA-binding domain superfamily AMED_4160 IPR000847 Transcription regulator HTH, LysR AMED_4160 IPR005119 LysR, substrate-binding AMED_4163 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4163 IPR025714 Methyltransferase domain AMED_4164 IPR000834 Peptidase M14, carboxypeptidase A AMED_4164 IPR033810 Carboxypeptidase T AMED_4166 IPR011761 ATP-grasp fold AMED_4166 IPR005482 Biotin carboxylase, C-terminal AMED_4166 IPR011054 Rudiment single hybrid motif AMED_4166 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AMED_4166 IPR011764 Biotin carboxylation domain AMED_4166 IPR005481 Biotin carboxylase-like, N-terminal domain AMED_4166 IPR016185 Pre-ATP-grasp domain superfamily AMED_4166 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_4173 IPR004839 Aminotransferase, class I/classII AMED_4173 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4173 IPR000524 Transcription regulator HTH, GntR AMED_4173 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4173 IPR036390 Winged helix DNA-binding domain superfamily AMED_4173 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4174 IPR036259 MFS transporter superfamily AMED_4174 IPR011701 Major facilitator superfamily AMED_4174 IPR020846 Major facilitator superfamily domain AMED_4176 IPR003729 Bifunctional nuclease domain AMED_4176 IPR036104 Bifunctional nuclease superfamily AMED_4177 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_4177 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4177 IPR037401 SnoaL-like domain AMED_4177 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_4177 IPR032710 NTF2-like domain superfamily AMED_4177 IPR039425 RNA polymerase sigma-70 like AMED_4177 IPR014284 RNA polymerase sigma-70 like domain AMED_4177 IPR013325 RNA polymerase sigma factor, region 2 AMED_4177 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_4177 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_4177 IPR007627 RNA polymerase sigma-70 region 2 AMED_4179 IPR042099 AMP-dependent synthetase-like superfamily AMED_4179 IPR000873 AMP-dependent synthetase/ligase AMED_4184 IPR030391 RNA methyltransferase TrmA, conserved site AMED_4184 IPR012340 Nucleic acid-binding, OB-fold AMED_4184 IPR002792 TRAM domain AMED_4184 IPR010280 (Uracil-5)-methyltransferase family AMED_4184 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4184 IPR030390 RNA methyltransferase TrmA, active site AMED_4189 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_4189 IPR012310 DNA ligase, ATP-dependent, central AMED_4189 IPR014146 DNA ligase D, ligase domain AMED_4189 IPR033651 LigD polymerase domain, PaeLigD-type AMED_4189 IPR014143 DNA ligase D AMED_4189 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_4189 IPR014145 DNA ligase D, polymerase domain AMED_4189 IPR012340 Nucleic acid-binding, OB-fold AMED_4190 IPR011877 Ribokinase AMED_4190 IPR029056 Ribokinase-like AMED_4190 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_4190 IPR011611 Carbohydrate kinase PfkB AMED_4190 IPR002139 Ribokinase/fructokinase AMED_4191 IPR002121 HRDC domain AMED_4191 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_4191 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AMED_4191 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4191 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMED_4191 IPR018982 RQC domain AMED_4191 IPR010997 HRDC-like superfamily AMED_4191 IPR004589 DNA helicase, ATP-dependent, RecQ type AMED_4191 IPR011545 DEAD/DEAH box helicase domain AMED_4191 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4191 IPR001650 Helicase, C-terminal AMED_4197 IPR014146 DNA ligase D, ligase domain AMED_4197 IPR012340 Nucleic acid-binding, OB-fold AMED_4197 IPR033649 LigD polymerase domain, MtLigD-type AMED_4197 IPR012310 DNA ligase, ATP-dependent, central AMED_4197 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_4197 IPR014145 DNA ligase D, polymerase domain AMED_4197 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_4200 IPR013094 Alpha/beta hydrolase fold-3 AMED_4200 IPR029058 Alpha/Beta hydrolase fold AMED_4201 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_4201 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_4201 IPR001647 DNA-binding HTH domain, TetR-type AMED_4201 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4201 IPR009057 Homeobox-like domain superfamily AMED_4203 IPR029058 Alpha/Beta hydrolase fold AMED_4203 IPR000073 Alpha/beta hydrolase fold-1 AMED_4203 IPR022742 Serine aminopeptidase, S33 AMED_4209 IPR026587 Sirtuin, class II AMED_4209 IPR026590 Sirtuin family, catalytic core domain AMED_4209 IPR003000 Sirtuin family AMED_4209 IPR026591 Sirtuin, catalytic core small domain superfamily AMED_4209 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_4212 IPR036249 Thioredoxin-like superfamily AMED_4212 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMED_4212 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4212 IPR012081 Alkyl hydroperoxide reductase subunit F AMED_4212 IPR023753 FAD/NAD(P)-binding domain AMED_4212 IPR002109 Glutaredoxin AMED_4212 IPR012336 Thioredoxin-like fold AMED_4213 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4213 IPR001387 Cro/C1-type helix-turn-helix domain AMED_4214 IPR016181 Acyl-CoA N-acyltransferase AMED_4214 IPR000182 GNAT domain AMED_4216 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4216 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_4216 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AMED_4216 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AMED_4216 IPR033720 Elongation factor Tu, domain 2 AMED_4216 IPR031157 Tr-type G domain, conserved site AMED_4216 IPR009000 Translation protein, beta-barrel domain superfamily AMED_4216 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMED_4216 IPR000795 Transcription factor, GTP-binding domain AMED_4216 IPR005225 Small GTP-binding protein domain AMED_4216 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMED_4219 IPR003361 Acetaldehyde dehydrogenase AMED_4219 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMED_4219 IPR015426 Acetaldehyde dehydrogenase, C-terminal AMED_4219 IPR036291 NAD(P)-binding domain superfamily AMED_4220 IPR000891 Pyruvate carboxyltransferase AMED_4220 IPR017629 4-hydroxy-2-oxovalerate aldolase AMED_4220 IPR012425 DmpG-like communication AMED_4220 IPR013785 Aldolase-type TIM barrel AMED_4220 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain AMED_4222 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4222 IPR002938 FAD-binding domain AMED_4223 IPR041347 MftR, C-terminal AMED_4223 IPR023851 Transcriptional regulator, TetR-type AMED_4223 IPR001647 DNA-binding HTH domain, TetR-type AMED_4223 IPR009057 Homeobox-like domain superfamily AMED_4225 IPR000120 Amidase AMED_4225 IPR036928 Amidase signature (AS) superfamily AMED_4225 IPR023631 Amidase signature domain AMED_4225 IPR020556 Amidase, conserved site AMED_4226 IPR012338 Beta-lactamase/transpeptidase-like AMED_4226 IPR001466 Beta-lactamase-related AMED_4227 IPR001123 Amino acid exporter protein, LeuE-type AMED_4227 IPR004777 L-lysine exporter/arginine exporter AMED_4228 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AMED_4228 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AMED_4228 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMED_4228 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AMED_4228 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AMED_4228 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4228 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMED_4230 IPR018655 Protein of unknown function DUF2086 AMED_4231 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4231 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AMED_4231 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AMED_4231 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMED_4231 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMED_4231 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AMED_4231 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AMED_4232 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4232 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_4232 IPR039425 RNA polymerase sigma-70 like AMED_4232 IPR014284 RNA polymerase sigma-70 like domain AMED_4232 IPR007627 RNA polymerase sigma-70 region 2 AMED_4232 IPR013325 RNA polymerase sigma factor, region 2 AMED_4232 IPR007630 RNA polymerase sigma-70 region 4 AMED_4233 IPR041698 Methyltransferase domain 25 AMED_4233 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMED_4233 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMED_4233 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4233 IPR004556 Methyltransferase HemK-like AMED_4233 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMED_4236 IPR011991 ArsR-like helix-turn-helix domain AMED_4236 IPR019888 Transcription regulator AsnC-type AMED_4236 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4236 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_4236 IPR011008 Dimeric alpha-beta barrel AMED_4236 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_4236 IPR000485 AsnC-type HTH domain AMED_4236 IPR036390 Winged helix DNA-binding domain superfamily AMED_4237 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4237 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_4237 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4237 IPR005814 Aminotransferase class-III AMED_4238 IPR002397 Cytochrome P450, B-class AMED_4238 IPR036396 Cytochrome P450 superfamily AMED_4238 IPR001128 Cytochrome P450 AMED_4238 IPR017972 Cytochrome P450, conserved site AMED_4240 IPR001789 Signal transduction response regulator, receiver domain AMED_4240 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_4240 IPR011006 CheY-like superfamily AMED_4240 IPR035909 Methylesterase CheB, C-terminal AMED_4240 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AMED_4244 IPR005543 PASTA domain AMED_4244 IPR000719 Protein kinase domain AMED_4244 IPR011009 Protein kinase-like domain superfamily AMED_4244 IPR008271 Serine/threonine-protein kinase, active site AMED_4246 IPR020575 Heat shock protein Hsp90, N-terminal AMED_4246 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_4246 IPR037196 HSP90, C-terminal domain AMED_4246 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4246 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4246 IPR001404 Heat shock protein Hsp90 family AMED_4248 IPR000923 Blue (type 1) copper domain AMED_4248 IPR028871 Blue (type 1) copper protein, binding site AMED_4248 IPR001235 Blue (type 1) copper protein, plastocyanin-type AMED_4248 IPR008972 Cupredoxin AMED_4248 IPR002387 Plastocyanin AMED_4248 IPR023511 Plastocyanin, cyanobacteria AMED_4255 IPR029057 Phosphoribosyltransferase-like AMED_4255 IPR007815 Erythromycin esterase AMED_4255 IPR000836 Phosphoribosyltransferase domain AMED_4261 IPR036291 NAD(P)-binding domain superfamily AMED_4261 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4261 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4264 IPR023214 HAD superfamily AMED_4264 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase AMED_4264 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AMED_4264 IPR036412 HAD-like superfamily AMED_4264 IPR006543 Histidinol-phosphate phosphatase AMED_4265 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMED_4265 IPR015590 Aldehyde dehydrogenase domain AMED_4265 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_4265 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_4265 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_4265 IPR016161 Aldehyde/histidinol dehydrogenase AMED_4269 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMED_4269 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMED_4269 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMED_4269 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMED_4269 IPR036291 NAD(P)-binding domain superfamily AMED_4269 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_4269 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMED_4269 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AMED_4271 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4271 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4271 IPR036291 NAD(P)-binding domain superfamily AMED_4272 IPR023030 Bifunctional protein HldE AMED_4272 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_4272 IPR000943 RNA polymerase sigma-70 AMED_4272 IPR029056 Ribokinase-like AMED_4272 IPR011914 RfaE bifunctional protein, domain II AMED_4272 IPR011611 Carbohydrate kinase PfkB AMED_4272 IPR004821 Cytidyltransferase-like domain AMED_4273 IPR004515 Phosphoheptose isomerase AMED_4273 IPR035461 GmhA/DiaA AMED_4273 IPR001347 Sugar isomerase (SIS) AMED_4274 IPR003696 Carbamoyltransferase AMED_4274 IPR038152 Carbamoyltransferase, C-terminal domain superfamily AMED_4274 IPR031730 Carbamoyltransferase, C-terminal AMED_4275 IPR001509 NAD-dependent epimerase/dehydratase AMED_4275 IPR036291 NAD(P)-binding domain superfamily AMED_4275 IPR005886 UDP-glucose 4-epimerase AMED_4278 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4278 IPR007554 CDP-glycerol glycerophosphotransferase AMED_4278 IPR001173 Glycosyltransferase 2-like AMED_4279 IPR017814 Mycothiol biosynthesis protein, MshA AMED_4279 IPR001296 Glycosyl transferase, family 1 AMED_4279 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_4282 IPR001204 Phosphate transporter AMED_4283 IPR036291 NAD(P)-binding domain superfamily AMED_4283 IPR011032 GroES-like superfamily AMED_4283 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_4283 IPR027399 Alcohol dehydrogenase GroES-associated AMED_4283 IPR013154 Alcohol dehydrogenase, N-terminal AMED_4283 IPR013149 Alcohol dehydrogenase, C-terminal AMED_4284 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_4284 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain AMED_4284 IPR029058 Alpha/Beta hydrolase fold AMED_4284 IPR008979 Galactose-binding-like domain superfamily AMED_4284 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase AMED_4284 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_4284 IPR036313 PepX, N-terminal domain superfamily AMED_4286 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4288 IPR017039 Virulence factor BrkB AMED_4288 IPR023679 Uncharacterised protein family UPF0761, bacterial AMED_4293 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_4293 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4293 IPR006076 FAD dependent oxidoreductase AMED_4293 IPR005805 Rieske iron-sulphur protein, C-terminal AMED_4293 IPR038010 YhfW, C-terminal Rieske domain AMED_4293 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_4294 IPR016185 Pre-ATP-grasp domain superfamily AMED_4294 IPR036914 Methylglyoxal synthase-like domain superfamily AMED_4294 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AMED_4294 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AMED_4294 IPR006275 Carbamoyl-phosphate synthase, large subunit AMED_4294 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_4294 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AMED_4294 IPR011607 Methylglyoxal synthase-like domain AMED_4294 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AMED_4294 IPR011761 ATP-grasp fold AMED_4296 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMED_4296 IPR004556 Methyltransferase HemK-like AMED_4296 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMED_4296 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMED_4296 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4296 IPR007848 Methyltransferase small domain AMED_4299 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_4299 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_4299 IPR011793 Putative glutamate--cysteine ligase YbdK AMED_4301 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_4301 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_4301 IPR011793 Putative glutamate--cysteine ligase YbdK AMED_4303 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4303 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_4303 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4303 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily AMED_4303 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AMED_4303 IPR000310 Orn/Lys/Arg decarboxylase, major domain AMED_4305 IPR003819 TauD/TfdA-like domain AMED_4305 IPR042098 Taurine dioxygenase TauD-like superfamily AMED_4306 IPR036661 Luciferase-like domain superfamily AMED_4306 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AMED_4306 IPR011251 Luciferase-like domain AMED_4307 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4307 IPR035906 MetI-like superfamily AMED_4308 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4308 IPR003593 AAA+ ATPase domain AMED_4308 IPR003439 ABC transporter-like AMED_4312 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_4312 IPR016292 Epoxide hydrolase AMED_4312 IPR010497 Epoxide hydrolase, N-terminal AMED_4312 IPR000639 Epoxide hydrolase-like AMED_4312 IPR029058 Alpha/Beta hydrolase fold AMED_4314 IPR000792 Transcription regulator LuxR, C-terminal AMED_4314 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4314 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4314 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4314 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4315 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4315 IPR002938 FAD-binding domain AMED_4316 IPR039384 HINT family AMED_4316 IPR001310 Histidine triad (HIT) protein AMED_4316 IPR011146 HIT-like domain AMED_4316 IPR036265 HIT-like superfamily AMED_4316 IPR019808 Histidine triad, conserved site AMED_4317 IPR008599 Putative sugar diacid recognition AMED_4317 IPR025736 PucR C-terminal helix-turn-helix domain AMED_4317 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_4317 IPR041522 CdaR, GGDEF-like domain AMED_4322 IPR029016 GAF-like domain superfamily AMED_4322 IPR009057 Homeobox-like domain superfamily AMED_4322 IPR002197 DNA binding HTH domain, Fis-type AMED_4322 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4322 IPR002078 RNA polymerase sigma factor 54 interaction domain AMED_4324 IPR009078 Ferritin-like superfamily AMED_4324 IPR012348 Ribonucleotide reductase-like AMED_4324 IPR003430 Methane/phenol/toluene hydroxylase AMED_4325 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_4325 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_4325 IPR012675 Beta-grasp domain superfamily AMED_4325 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_4325 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_4325 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_4325 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_4325 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_4325 IPR017938 Riboflavin synthase-like beta-barrel AMED_4325 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_4326 IPR009078 Ferritin-like superfamily AMED_4326 IPR012078 Methane/phenol monooxygenase, hydroxylase component AMED_4326 IPR003430 Methane/phenol/toluene hydroxylase AMED_4326 IPR012348 Ribonucleotide reductase-like AMED_4327 IPR003454 Monooxygenase component MmoB/DmpM AMED_4327 IPR036889 Monooxygenase component MmoB/DmpM superfamily AMED_4331 IPR027413 GroEL-like equatorial domain superfamily AMED_4331 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMED_4331 IPR027409 GroEL-like apical domain superfamily AMED_4331 IPR002423 Chaperonin Cpn60/TCP-1 family AMED_4331 IPR001844 Chaperonin Cpn60 AMED_4333 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4333 IPR002182 NB-ARC AMED_4333 IPR019734 Tetratricopeptide repeat AMED_4333 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4333 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4333 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4333 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4333 IPR005158 Bacterial transcriptional activator domain AMED_4335 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4335 IPR001647 DNA-binding HTH domain, TetR-type AMED_4335 IPR009057 Homeobox-like domain superfamily AMED_4336 IPR029058 Alpha/Beta hydrolase fold AMED_4336 IPR000639 Epoxide hydrolase-like AMED_4336 IPR010497 Epoxide hydrolase, N-terminal AMED_4336 IPR016292 Epoxide hydrolase AMED_4336 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_4337 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4337 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4337 IPR036291 NAD(P)-binding domain superfamily AMED_4338 IPR040079 Glutathione Transferase family AMED_4338 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMED_4338 IPR036249 Thioredoxin-like superfamily AMED_4338 IPR004045 Glutathione S-transferase, N-terminal AMED_4338 IPR010987 Glutathione S-transferase, C-terminal-like AMED_4338 IPR016639 Glutathione S-transferase Omega/GSH AMED_4340 IPR023480 Uncharacterised protein family UPF0312/YceI AMED_4340 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMED_4340 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMED_4341 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4341 IPR001647 DNA-binding HTH domain, TetR-type AMED_4341 IPR009057 Homeobox-like domain superfamily AMED_4343 IPR017853 Glycoside hydrolase superfamily AMED_4343 IPR000322 Glycoside hydrolase family 31 AMED_4343 IPR011013 Galactose mutarotase-like domain superfamily AMED_4344 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4344 IPR035906 MetI-like superfamily AMED_4345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4345 IPR035906 MetI-like superfamily AMED_4347 IPR023588 Transcription regulator HTH, PurR AMED_4347 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4347 IPR000843 LacI-type HTH domain AMED_4347 IPR028082 Periplasmic binding protein-like I AMED_4348 IPR013783 Immunoglobulin-like fold AMED_4348 IPR017853 Glycoside hydrolase superfamily AMED_4348 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_4348 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_4348 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_4348 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_4348 IPR026891 Fibronectin type III-like domain AMED_4348 IPR037524 PA14/GLEYA domain AMED_4348 IPR011658 PA14 domain AMED_4350 IPR001128 Cytochrome P450 AMED_4350 IPR036396 Cytochrome P450 superfamily AMED_4350 IPR002403 Cytochrome P450, E-class, group IV AMED_4350 IPR017972 Cytochrome P450, conserved site AMED_4352 IPR001633 EAL domain AMED_4352 IPR035919 EAL domain superfamily AMED_4352 IPR000253 Forkhead-associated (FHA) domain AMED_4352 IPR000160 GGDEF domain AMED_4352 IPR029787 Nucleotide cyclase AMED_4352 IPR008984 SMAD/FHA domain superfamily AMED_4355 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_4355 IPR004017 Cysteine-rich domain AMED_4355 IPR009051 Alpha-helical ferredoxin AMED_4355 IPR023234 NarG-like domain AMED_4355 IPR036197 NarG-like superfamily AMED_4355 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_4356 IPR008984 SMAD/FHA domain superfamily AMED_4356 IPR042287 FhaA, N-terminal AMED_4356 IPR000253 Forkhead-associated (FHA) domain AMED_4356 IPR022128 Domain of unknown function DUF3662 AMED_4358 IPR020846 Major facilitator superfamily domain AMED_4358 IPR036259 MFS transporter superfamily AMED_4358 IPR011701 Major facilitator superfamily AMED_4358 IPR005828 Major facilitator, sugar transporter-like AMED_4358 IPR005829 Sugar transporter, conserved site AMED_4358 IPR004736 MFS transporter, metabolite:H symporter AMED_4360 IPR022893 Shikimate dehydrogenase family AMED_4360 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AMED_4360 IPR041121 SDH, C-terminal AMED_4360 IPR036291 NAD(P)-binding domain superfamily AMED_4361 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal AMED_4361 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_4361 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_4361 IPR013022 Xylose isomerase-like, TIM barrel domain AMED_4361 IPR036237 Xylose isomerase-like superfamily AMED_4361 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_4362 IPR006059 Bacterial extracellular solute-binding protein AMED_4363 IPR035906 MetI-like superfamily AMED_4363 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4364 IPR035906 MetI-like superfamily AMED_4364 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4365 IPR019800 Glycoside hydrolase, family 3, active site AMED_4365 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_4365 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_4365 IPR017853 Glycoside hydrolase superfamily AMED_4365 IPR022956 Beta-hexosaminidase, bacterial AMED_4367 IPR003646 SH3-like domain, bacterial-type AMED_4376 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4376 IPR014284 RNA polymerase sigma-70 like domain AMED_4376 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_4376 IPR007627 RNA polymerase sigma-70 region 2 AMED_4376 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_4376 IPR039425 RNA polymerase sigma-70 like AMED_4376 IPR013325 RNA polymerase sigma factor, region 2 AMED_4376 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_4378 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4378 IPR029016 GAF-like domain superfamily AMED_4378 IPR003018 GAF domain AMED_4378 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4378 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_4379 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4379 IPR001789 Signal transduction response regulator, receiver domain AMED_4379 IPR000792 Transcription regulator LuxR, C-terminal AMED_4379 IPR011006 CheY-like superfamily AMED_4383 IPR028202 Reductase, C-terminal AMED_4383 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_4383 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4383 IPR023753 FAD/NAD(P)-binding domain AMED_4384 IPR001474 GTP cyclohydrolase I AMED_4384 IPR020602 GTP cyclohydrolase I domain AMED_4384 IPR018234 GTP cyclohydrolase I, conserved site AMED_4387 IPR028082 Periplasmic binding protein-like I AMED_4387 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4387 IPR000843 LacI-type HTH domain AMED_4391 IPR036291 NAD(P)-binding domain superfamily AMED_4391 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4392 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_4392 IPR001579 Glycoside hydrolase, chitinase active site AMED_4392 IPR017853 Glycoside hydrolase superfamily AMED_4392 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_4392 IPR001919 Carbohydrate-binding type-2 domain AMED_4392 IPR013783 Immunoglobulin-like fold AMED_4392 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_4392 IPR018366 Carbohydrate-binding type-2, conserved site AMED_4392 IPR011583 Chitinase II AMED_4392 IPR029070 Chitinase insertion domain superfamily AMED_4392 IPR003961 Fibronectin type III AMED_4392 IPR036116 Fibronectin type III superfamily AMED_4394 IPR012338 Beta-lactamase/transpeptidase-like AMED_4394 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AMED_4394 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMED_4394 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AMED_4394 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AMED_4394 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMED_4396 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4396 IPR028082 Periplasmic binding protein-like I AMED_4396 IPR023588 Transcription regulator HTH, PurR AMED_4396 IPR000843 LacI-type HTH domain AMED_4397 IPR033893 ABC transporter periplasmic-binding protein YtfQ AMED_4397 IPR028082 Periplasmic binding protein-like I AMED_4397 IPR025997 Periplasmic binding protein AMED_4398 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4398 IPR003593 AAA+ ATPase domain AMED_4398 IPR003439 ABC transporter-like AMED_4398 IPR017871 ABC transporter, conserved site AMED_4399 IPR001851 ABC transporter, permease AMED_4400 IPR001851 ABC transporter, permease AMED_4401 IPR008979 Galactose-binding-like domain superfamily AMED_4401 IPR003305 Carbohydrate-binding, CenC-like AMED_4401 IPR013780 Glycosyl hydrolase, all-beta AMED_4401 IPR017853 Glycoside hydrolase superfamily AMED_4401 IPR010720 Alpha-L-arabinofuranosidase, C-terminal AMED_4401 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_4402 IPR000577 Carbohydrate kinase, FGGY AMED_4402 IPR005929 Ribulokinase AMED_4402 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMED_4402 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMED_4403 IPR001303 Class II aldolase/adducin N-terminal AMED_4403 IPR004661 L-ribulose-5-phosphate 4-epimerase AMED_4403 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMED_4404 IPR003762 L-arabinose isomerase AMED_4404 IPR038583 L-arabinose isomerase, N-terminal domain superfamily AMED_4404 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily AMED_4404 IPR004216 L-fucose/L-arabinose isomerase, C-terminal AMED_4404 IPR024664 L-arabinose isomerase, C-terminal AMED_4405 IPR025997 Periplasmic binding protein AMED_4405 IPR028082 Periplasmic binding protein-like I AMED_4406 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4406 IPR003439 ABC transporter-like AMED_4406 IPR003593 AAA+ ATPase domain AMED_4406 IPR017871 ABC transporter, conserved site AMED_4407 IPR001851 ABC transporter, permease AMED_4409 IPR028082 Periplasmic binding protein-like I AMED_4409 IPR000843 LacI-type HTH domain AMED_4409 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4409 IPR023588 Transcription regulator HTH, PurR AMED_4410 IPR036396 Cytochrome P450 superfamily AMED_4410 IPR002397 Cytochrome P450, B-class AMED_4410 IPR001128 Cytochrome P450 AMED_4410 IPR017972 Cytochrome P450, conserved site AMED_4411 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMED_4411 IPR000577 Carbohydrate kinase, FGGY AMED_4411 IPR018483 Carbohydrate kinase, FGGY, conserved site AMED_4411 IPR005999 Glycerol kinase AMED_4411 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMED_4412 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4412 IPR005471 Transcription regulator IclR, N-terminal AMED_4412 IPR029016 GAF-like domain superfamily AMED_4412 IPR014757 Transcription regulator IclR, C-terminal AMED_4412 IPR036390 Winged helix DNA-binding domain superfamily AMED_4413 IPR000425 Major intrinsic protein AMED_4413 IPR023271 Aquaporin-like AMED_4413 IPR022357 Major intrinsic protein, conserved site AMED_4414 IPR000577 Carbohydrate kinase, FGGY AMED_4414 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMED_4414 IPR005999 Glycerol kinase AMED_4414 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMED_4414 IPR018483 Carbohydrate kinase, FGGY, conserved site AMED_4415 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4415 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily AMED_4415 IPR031656 Alpha-glycerophosphate oxidase, C-terminal AMED_4415 IPR006076 FAD dependent oxidoreductase AMED_4415 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AMED_4417 IPR018223 Argininosuccinate synthase, conserved site AMED_4417 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AMED_4417 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail AMED_4417 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_4417 IPR023437 Argininosuccinate synthase, type 2 subfamily AMED_4417 IPR001518 Argininosuccinate synthase AMED_4418 IPR036736 ACP-like superfamily AMED_4418 IPR001227 Acyl transferase domain superfamily AMED_4418 IPR016039 Thiolase-like AMED_4418 IPR006162 Phosphopantetheine attachment site AMED_4418 IPR009081 Phosphopantetheine binding ACP domain AMED_4418 IPR015083 Polyketide synthase, docking domain AMED_4418 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4418 IPR013968 Polyketide synthase, ketoreductase domain AMED_4418 IPR020843 Polyketide synthase, enoylreductase domain AMED_4418 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_4418 IPR020807 Polyketide synthase, dehydratase domain AMED_4418 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_4418 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4418 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_4418 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4418 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4418 IPR018201 Beta-ketoacyl synthase, active site AMED_4418 IPR011032 GroES-like superfamily AMED_4418 IPR015357 Erythronolide synthase, docking AMED_4418 IPR036347 Erythronolide synthase, docking domain superfamily AMED_4418 IPR013154 Alcohol dehydrogenase, N-terminal AMED_4418 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_4418 IPR014043 Acyl transferase AMED_4418 IPR036291 NAD(P)-binding domain superfamily AMED_4425 IPR012338 Beta-lactamase/transpeptidase-like AMED_4425 IPR001466 Beta-lactamase-related AMED_4426 IPR006094 FAD linked oxidase, N-terminal AMED_4426 IPR007173 D-arabinono-1,4-lactone oxidase AMED_4426 IPR016166 FAD-binding domain, PCMH-type AMED_4426 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMED_4426 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_4426 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase AMED_4426 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_4426 IPR036318 FAD-binding, type PCMH-like superfamily AMED_4427 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4427 IPR028082 Periplasmic binding protein-like I AMED_4427 IPR000843 LacI-type HTH domain AMED_4429 IPR006059 Bacterial extracellular solute-binding protein AMED_4430 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4430 IPR035906 MetI-like superfamily AMED_4431 IPR035906 MetI-like superfamily AMED_4431 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4433 IPR036291 NAD(P)-binding domain superfamily AMED_4433 IPR004104 Oxidoreductase, C-terminal AMED_4433 IPR000683 Oxidoreductase, N-terminal AMED_4434 IPR036291 NAD(P)-binding domain superfamily AMED_4434 IPR000683 Oxidoreductase, N-terminal AMED_4434 IPR004104 Oxidoreductase, C-terminal AMED_4436 IPR011050 Pectin lyase fold/virulence factor AMED_4436 IPR002022 Pectate lyase AMED_4436 IPR012334 Pectin lyase fold AMED_4437 IPR011050 Pectin lyase fold/virulence factor AMED_4437 IPR012334 Pectin lyase fold AMED_4437 IPR004898 Pectate lyase PlyH/PlyE-like AMED_4438 IPR000070 Pectinesterase, catalytic AMED_4438 IPR012334 Pectin lyase fold AMED_4438 IPR033131 Pectinesterase, Asp active site AMED_4438 IPR011050 Pectin lyase fold/virulence factor AMED_4439 IPR006710 Glycoside hydrolase, family 43 AMED_4439 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_4439 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase AMED_4442 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4442 IPR013026 Tetratricopeptide repeat-containing domain AMED_4442 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4442 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4442 IPR005158 Bacterial transcriptional activator domain AMED_4442 IPR002182 NB-ARC AMED_4442 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4442 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4442 IPR019734 Tetratricopeptide repeat AMED_4445 IPR006015 Universal stress protein A family AMED_4445 IPR006016 UspA AMED_4446 IPR010627 Peptidase A24A, N-terminal AMED_4446 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMED_4446 IPR000045 Prepilin type IV endopeptidase, peptidase domain AMED_4450 IPR003004 GspF/PilC family AMED_4450 IPR042094 Type II secretion system F domain superfamily AMED_4450 IPR001992 Type II secretion system conserved site AMED_4450 IPR018076 Type II secretion system F domain AMED_4451 IPR003593 AAA+ ATPase domain AMED_4451 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4451 IPR001482 Type II/IV secretion system protein AMED_4451 IPR013369 Type II secretion system GspE AMED_4451 IPR037257 General secretory system II, protein E, N-terminal superfamily AMED_4452 IPR003593 AAA+ ATPase domain AMED_4452 IPR006321 Pilus retraction protein PilT AMED_4452 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4452 IPR001482 Type II/IV secretion system protein AMED_4453 IPR010054 General secretion pathway protein G AMED_4453 IPR013545 Type II secretion system protein G AMED_4453 IPR012902 Prokaryotic N-terminal methylation site AMED_4453 IPR000983 Bacterial general secretion pathway protein G-type pilin AMED_4458 IPR013549 Domain of unknown function DUF1731 AMED_4458 IPR036291 NAD(P)-binding domain superfamily AMED_4458 IPR010099 Epimerase family protein SDR39U1 AMED_4458 IPR001509 NAD-dependent epimerase/dehydratase AMED_4460 IPR029058 Alpha/Beta hydrolase fold AMED_4460 IPR013094 Alpha/beta hydrolase fold-3 AMED_4461 IPR020843 Polyketide synthase, enoylreductase domain AMED_4461 IPR013149 Alcohol dehydrogenase, C-terminal AMED_4461 IPR036291 NAD(P)-binding domain superfamily AMED_4461 IPR011032 GroES-like superfamily AMED_4461 IPR013154 Alcohol dehydrogenase, N-terminal AMED_4461 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_4463 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AMED_4463 IPR011004 Trimeric LpxA-like superfamily AMED_4463 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4463 IPR011831 Glucose-1-phosphate adenylyltransferase AMED_4463 IPR005836 ADP-glucose pyrophosphorylase, conserved site AMED_4463 IPR005835 Nucleotidyl transferase domain AMED_4464 IPR001296 Glycosyl transferase, family 1 AMED_4464 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_4464 IPR011875 Alpha-maltose-1-phosphate synthase AMED_4466 IPR014237 Anti-sigma F factor antagonist AMED_4466 IPR036513 STAS domain superfamily AMED_4466 IPR003658 Anti-sigma factor antagonist AMED_4466 IPR002645 STAS domain AMED_4469 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AMED_4469 IPR013783 Immunoglobulin-like fold AMED_4469 IPR017853 Glycoside hydrolase superfamily AMED_4469 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_4469 IPR008979 Galactose-binding-like domain superfamily AMED_4469 IPR028829 Exo-beta-D-glucosaminidase AMED_4469 IPR005084 Carbohydrate binding module family 6 AMED_4469 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_4469 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_4471 IPR041522 CdaR, GGDEF-like domain AMED_4471 IPR025736 PucR C-terminal helix-turn-helix domain AMED_4471 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_4472 IPR005517 Translation elongation factor EFG/EF2, domain IV AMED_4472 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4472 IPR009000 Translation protein, beta-barrel domain superfamily AMED_4472 IPR000795 Transcription factor, GTP-binding domain AMED_4472 IPR005225 Small GTP-binding protein domain AMED_4472 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_4472 IPR004540 Translation elongation factor EFG/EF2 AMED_4472 IPR031157 Tr-type G domain, conserved site AMED_4472 IPR041095 Elongation Factor G, domain II AMED_4472 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_4472 IPR000640 Elongation factor EFG, domain V-like AMED_4472 IPR035649 EFG, domain V AMED_4472 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_4472 IPR035647 EF-G domain III/V-like AMED_4472 IPR009022 Elongation factor G, domain III AMED_4473 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4473 IPR011340 Cysteine desulfurase-related AMED_4473 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_4473 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4473 IPR000192 Aminotransferase class V domain AMED_4475 IPR018584 Glycosyltransferase family 87 AMED_4478 IPR002938 FAD-binding domain AMED_4478 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4481 IPR020846 Major facilitator superfamily domain AMED_4481 IPR036259 MFS transporter superfamily AMED_4481 IPR011701 Major facilitator superfamily AMED_4482 IPR001031 Thioesterase AMED_4482 IPR016039 Thiolase-like AMED_4482 IPR009081 Phosphopantetheine binding ACP domain AMED_4482 IPR029058 Alpha/Beta hydrolase fold AMED_4482 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4482 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_4482 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_4482 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4482 IPR018201 Beta-ketoacyl synthase, active site AMED_4482 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_4482 IPR014043 Acyl transferase AMED_4482 IPR036736 ACP-like superfamily AMED_4482 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4482 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4483 IPR000873 AMP-dependent synthetase/ligase AMED_4483 IPR042099 AMP-dependent synthetase-like superfamily AMED_4486 IPR036291 NAD(P)-binding domain superfamily AMED_4486 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4486 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4487 IPR004276 Glycosyltransferase family 28, N-terminal domain AMED_4487 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase AMED_4489 IPR012340 Nucleic acid-binding, OB-fold AMED_4489 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_4489 IPR033649 LigD polymerase domain, MtLigD-type AMED_4489 IPR014146 DNA ligase D, ligase domain AMED_4489 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_4489 IPR014145 DNA ligase D, polymerase domain AMED_4489 IPR012310 DNA ligase, ATP-dependent, central AMED_4491 IPR002504 NAD kinase AMED_4491 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AMED_4491 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMED_4491 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMED_4492 IPR020946 Flavin monooxygenase-like AMED_4492 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4493 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4493 IPR036291 NAD(P)-binding domain superfamily AMED_4493 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4494 IPR029058 Alpha/Beta hydrolase fold AMED_4494 IPR000639 Epoxide hydrolase-like AMED_4494 IPR000073 Alpha/beta hydrolase fold-1 AMED_4495 IPR017972 Cytochrome P450, conserved site AMED_4495 IPR001128 Cytochrome P450 AMED_4495 IPR002401 Cytochrome P450, E-class, group I AMED_4495 IPR036396 Cytochrome P450 superfamily AMED_4497 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4497 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4497 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4497 IPR019734 Tetratricopeptide repeat AMED_4497 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4497 IPR013026 Tetratricopeptide repeat-containing domain AMED_4497 IPR005158 Bacterial transcriptional activator domain AMED_4497 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4497 IPR002182 NB-ARC AMED_4498 IPR000032 Phosphocarrier protein HPr-like AMED_4498 IPR035895 HPr-like superfamily AMED_4498 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMED_4499 IPR013014 Phosphotransferase system, EIIC component, type 2 AMED_4499 IPR003352 Phosphotransferase system, EIIC AMED_4499 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AMED_4499 IPR013011 Phosphotransferase system, EIIB component, type 2 AMED_4499 IPR036095 PTS system IIB component-like superfamily AMED_4499 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AMED_4499 IPR006327 Phosphotransferase system, fructose IIC component AMED_4500 IPR002178 PTS EIIA type-2 domain AMED_4500 IPR006318 Phosphotransferase system, enzyme I-like AMED_4500 IPR023151 PEP-utilising enzyme, conserved site AMED_4500 IPR008279 PEP-utilising enzyme, mobile domain AMED_4500 IPR016152 Phosphotransferase/anion transporter AMED_4500 IPR040442 Pyruvate kinase-like domain superfamily AMED_4500 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_4500 IPR036618 PtsI, HPr-binding domain superfamily AMED_4500 IPR000032 Phosphocarrier protein HPr-like AMED_4500 IPR008731 Phosphotransferase system, enzyme I N-terminal AMED_4500 IPR000121 PEP-utilising enzyme, C-terminal AMED_4500 IPR036637 Phosphohistidine domain superfamily AMED_4500 IPR035895 HPr-like superfamily AMED_4500 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMED_4500 IPR018274 PEP-utilising enzyme, active site AMED_4501 IPR022463 Fructose 1-phosphate kinase AMED_4501 IPR017583 Tagatose/fructose phosphokinase AMED_4501 IPR011611 Carbohydrate kinase PfkB AMED_4501 IPR029056 Ribokinase-like AMED_4501 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_4503 IPR040442 Pyruvate kinase-like domain superfamily AMED_4503 IPR006318 Phosphotransferase system, enzyme I-like AMED_4503 IPR008731 Phosphotransferase system, enzyme I N-terminal AMED_4503 IPR000121 PEP-utilising enzyme, C-terminal AMED_4503 IPR024692 Phosphotransferase system, enzyme I AMED_4503 IPR008279 PEP-utilising enzyme, mobile domain AMED_4503 IPR018274 PEP-utilising enzyme, active site AMED_4503 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_4503 IPR036618 PtsI, HPr-binding domain superfamily AMED_4503 IPR023151 PEP-utilising enzyme, conserved site AMED_4503 IPR036637 Phosphohistidine domain superfamily AMED_4504 IPR000594 THIF-type NAD/FAD binding fold AMED_4504 IPR000415 Nitroreductase-like AMED_4504 IPR035985 Ubiquitin-activating enzyme AMED_4507 IPR026891 Fibronectin type III-like domain AMED_4507 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_4507 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_4507 IPR013783 Immunoglobulin-like fold AMED_4507 IPR017853 Glycoside hydrolase superfamily AMED_4507 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_4507 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_4508 IPR000843 LacI-type HTH domain AMED_4508 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4508 IPR023588 Transcription regulator HTH, PurR AMED_4508 IPR028082 Periplasmic binding protein-like I AMED_4510 IPR035906 MetI-like superfamily AMED_4510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4511 IPR035906 MetI-like superfamily AMED_4511 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4513 IPR028082 Periplasmic binding protein-like I AMED_4513 IPR023588 Transcription regulator HTH, PurR AMED_4513 IPR000843 LacI-type HTH domain AMED_4513 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4514 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_4514 IPR001919 Carbohydrate-binding type-2 domain AMED_4514 IPR017853 Glycoside hydrolase superfamily AMED_4514 IPR001000 Glycoside hydrolase family 10 domain AMED_4514 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_4515 IPR001919 Carbohydrate-binding type-2 domain AMED_4515 IPR001137 Glycoside hydrolase family 11 AMED_4515 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_4515 IPR013319 Glycoside hydrolase family 11/12 AMED_4515 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_4515 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_4515 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMED_4515 IPR033123 Glycosyl hydrolases family 11 (GH11) domain AMED_4515 IPR018208 Glycoside hydrolase family 11, active site 1 AMED_4515 IPR033119 Glycoside hydrolase family 11, active site 2 AMED_4515 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_4515 IPR002509 NodB homology domain AMED_4517 IPR002059 Cold-shock protein, DNA-binding AMED_4517 IPR012340 Nucleic acid-binding, OB-fold AMED_4517 IPR012156 Cold shock, CspA AMED_4517 IPR011129 Cold shock domain AMED_4517 IPR019844 Cold-shock (CSD) domain AMED_4518 IPR003333 Mycolic acid cyclopropane synthase AMED_4518 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4526 IPR011006 CheY-like superfamily AMED_4526 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4526 IPR036641 HPT domain superfamily AMED_4526 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4526 IPR003660 HAMP domain AMED_4526 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_4526 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMED_4526 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_4526 IPR001789 Signal transduction response regulator, receiver domain AMED_4526 IPR005467 Histidine kinase domain AMED_4526 IPR019247 Histidine kinase BarA, N-terminal AMED_4526 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_4527 IPR002645 STAS domain AMED_4527 IPR036513 STAS domain superfamily AMED_4527 IPR035965 PAS domain superfamily AMED_4527 IPR000700 PAS-associated, C-terminal AMED_4527 IPR001932 PPM-type phosphatase domain AMED_4527 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4527 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4527 IPR000014 PAS domain AMED_4527 IPR013656 PAS fold-4 AMED_4527 IPR036457 PPM-type phosphatase domain superfamily AMED_4528 IPR004837 Sodium/calcium exchanger membrane region AMED_4528 IPR004713 Calcium/proton exchanger AMED_4529 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4529 IPR036390 Winged helix DNA-binding domain superfamily AMED_4529 IPR000847 Transcription regulator HTH, LysR AMED_4529 IPR005119 LysR, substrate-binding AMED_4530 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_4530 IPR000399 TPP-binding enzyme, conserved site AMED_4530 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_4530 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_4530 IPR029061 Thiamin diphosphate-binding fold AMED_4530 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_4533 IPR016477 Fructosamine/Ketosamine-3-kinase AMED_4533 IPR011009 Protein kinase-like domain superfamily AMED_4535 IPR013856 Peptidase M4 domain AMED_4535 IPR001570 Peptidase M4, C-terminal AMED_4535 IPR027268 Peptidase M4/M1, CTD superfamily AMED_4535 IPR007484 Peptidase M28 AMED_4535 IPR041756 Peptidase M28, SGAP-like AMED_4537 IPR006101 Glycoside hydrolase, family 2 AMED_4537 IPR023232 Glycoside hydrolase, family 2, active site AMED_4537 IPR013783 Immunoglobulin-like fold AMED_4537 IPR017853 Glycoside hydrolase superfamily AMED_4537 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_4537 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_4537 IPR040605 Glycoside hydrolase family 2, domain 5 AMED_4537 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_4537 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_4537 IPR008979 Galactose-binding-like domain superfamily AMED_4537 IPR023230 Glycoside hydrolase, family 2, conserved site AMED_4538 IPR000843 LacI-type HTH domain AMED_4538 IPR028082 Periplasmic binding protein-like I AMED_4538 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4538 IPR023588 Transcription regulator HTH, PurR AMED_4539 IPR003439 ABC transporter-like AMED_4539 IPR003593 AAA+ ATPase domain AMED_4539 IPR015861 ABC transporter, ribose import, RbsA AMED_4539 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4539 IPR017871 ABC transporter, conserved site AMED_4540 IPR001851 ABC transporter, permease AMED_4541 IPR001851 ABC transporter, permease AMED_4543 IPR013448 L-rhamnose mutarotase AMED_4543 IPR008000 Rhamnose/fucose mutarotase AMED_4543 IPR011008 Dimeric alpha-beta barrel AMED_4545 IPR036291 NAD(P)-binding domain superfamily AMED_4545 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase AMED_4545 IPR001303 Class II aldolase/adducin N-terminal AMED_4545 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMED_4545 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4547 IPR013449 Rhamnulokinase AMED_4547 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMED_4547 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMED_4547 IPR000577 Carbohydrate kinase, FGGY AMED_4548 IPR000792 Transcription regulator LuxR, C-terminal AMED_4548 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4548 IPR011006 CheY-like superfamily AMED_4549 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_4549 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4549 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4551 IPR028082 Periplasmic binding protein-like I AMED_4551 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4551 IPR000843 LacI-type HTH domain AMED_4552 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AMED_4552 IPR013783 Immunoglobulin-like fold AMED_4552 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_4552 IPR005084 Carbohydrate binding module family 6 AMED_4552 IPR028829 Exo-beta-D-glucosaminidase AMED_4552 IPR017853 Glycoside hydrolase superfamily AMED_4552 IPR008979 Galactose-binding-like domain superfamily AMED_4552 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_4552 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_4563 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMED_4563 IPR001126 UmuC domain AMED_4563 IPR022880 DNA polymerase IV AMED_4563 IPR017961 DNA polymerase, Y-family, little finger domain AMED_4564 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4564 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_4564 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative AMED_4565 IPR042254 Lsr2, DNA binding domain AMED_4565 IPR042261 Lsr2, dimerization domain AMED_4565 IPR024412 Lsr2 AMED_4567 IPR003786 Sulfur carrier protein FdhD AMED_4567 IPR016193 Cytidine deaminase-like AMED_4568 IPR000847 Transcription regulator HTH, LysR AMED_4568 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4568 IPR005119 LysR, substrate-binding AMED_4568 IPR036390 Winged helix DNA-binding domain superfamily AMED_4569 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMED_4569 IPR036291 NAD(P)-binding domain superfamily AMED_4569 IPR016102 Succinyl-CoA synthetase-like AMED_4569 IPR005810 Succinyl-CoA ligase, alpha subunit AMED_4569 IPR003781 CoA-binding AMED_4569 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMED_4569 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMED_4570 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMED_4570 IPR011761 ATP-grasp fold AMED_4570 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AMED_4570 IPR013815 ATP-grasp fold, subdomain 1 AMED_4570 IPR016102 Succinyl-CoA synthetase-like AMED_4570 IPR005809 Succinate--CoA synthetase, beta subunit AMED_4570 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AMED_4571 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_4571 IPR029061 Thiamin diphosphate-binding fold AMED_4571 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_4571 IPR000399 TPP-binding enzyme, conserved site AMED_4571 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_4571 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_4572 IPR017659 Formyl-CoA:oxalate CoA-transferase AMED_4572 IPR023606 CoA-transferase family III domain superfamily AMED_4572 IPR003673 CoA-transferase family III AMED_4573 IPR013815 ATP-grasp fold, subdomain 1 AMED_4573 IPR003781 CoA-binding AMED_4573 IPR036291 NAD(P)-binding domain superfamily AMED_4573 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMED_4573 IPR016102 Succinyl-CoA synthetase-like AMED_4573 IPR011761 ATP-grasp fold AMED_4574 IPR011701 Major facilitator superfamily AMED_4574 IPR020846 Major facilitator superfamily domain AMED_4574 IPR036259 MFS transporter superfamily AMED_4574 IPR004741 Oxalate/formate antiporter family transporter AMED_4575 IPR036390 Winged helix DNA-binding domain superfamily AMED_4575 IPR011711 GntR, C-terminal AMED_4575 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_4575 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4575 IPR000524 Transcription regulator HTH, GntR AMED_4576 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_4576 IPR036291 NAD(P)-binding domain superfamily AMED_4576 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_4576 IPR013752 Ketopantoate reductase, C-terminal domain AMED_4576 IPR013332 Ketopantoate reductase, N-terminal domain AMED_4577 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain AMED_4577 IPR006656 Molybdopterin oxidoreductase AMED_4577 IPR006478 Formate dehydrogenase, alpha subunit AMED_4577 IPR006657 Molybdopterin dinucleotide-binding domain AMED_4577 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMED_4577 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AMED_4577 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_4577 IPR041924 Formate dehydrogenase H, N-terminal AMED_4577 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_4578 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AMED_4578 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AMED_4578 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AMED_4578 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AMED_4578 IPR019554 Soluble ligand binding domain AMED_4578 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AMED_4579 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AMED_4579 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AMED_4579 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_4579 IPR006657 Molybdopterin dinucleotide-binding domain AMED_4579 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_4579 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_4579 IPR006656 Molybdopterin oxidoreductase AMED_4579 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AMED_4579 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_4580 IPR036237 Xylose isomerase-like superfamily AMED_4580 IPR026040 Hydroxypyruvate isomerase-like AMED_4580 IPR013022 Xylose isomerase-like, TIM barrel domain AMED_4581 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_4581 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_4581 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_4581 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMED_4581 IPR006398 2-hydroxy-3-oxopropionate reductase AMED_4581 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_4581 IPR036291 NAD(P)-binding domain superfamily AMED_4581 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_4582 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_4582 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_4582 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_4582 IPR006397 Glyoxylate carboligase AMED_4582 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_4582 IPR029061 Thiamin diphosphate-binding fold AMED_4583 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_4583 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_4583 IPR036318 FAD-binding, type PCMH-like superfamily AMED_4583 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_4583 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_4583 IPR016166 FAD-binding domain, PCMH-type AMED_4584 IPR002888 [2Fe-2S]-binding AMED_4584 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_4584 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_4584 IPR012675 Beta-grasp domain superfamily AMED_4584 IPR036884 [2Fe-2S]-binding domain superfamily AMED_4584 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_4585 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_4585 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_4585 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_4585 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_4585 IPR017609 Xanthine dehydrogenase D subunit AMED_4586 IPR016192 APOBEC/CMP deaminase, zinc-binding AMED_4586 IPR016193 Cytidine deaminase-like AMED_4586 IPR002125 Cytidine and deoxycytidylate deaminase domain AMED_4587 IPR026033 Azaguanine-like transporters AMED_4587 IPR006043 Xanthine/uracil/vitamin C permease AMED_4589 IPR018197 Glycerate kinase, restriction-enzyme-like fold AMED_4589 IPR004381 Glycerate kinase AMED_4589 IPR018193 Glycerate kinase, flavodoxin-like fold AMED_4589 IPR036129 Glycerate kinase superfamily AMED_4591 IPR015220 Glucodextranase, N-terminal AMED_4591 IPR000165 Glucoamylase AMED_4591 IPR011613 GH15-like domain AMED_4591 IPR006425 Glucoamylase, bacterial AMED_4591 IPR011013 Galactose mutarotase-like domain superfamily AMED_4591 IPR012341 Six-hairpin glycosidase-like superfamily AMED_4591 IPR008928 Six-hairpin glycosidase superfamily AMED_4591 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_4594 IPR000544 Octanoyltransferase AMED_4594 IPR015797 NUDIX hydrolase-like domain superfamily AMED_4594 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMED_4594 IPR020084 NUDIX hydrolase, conserved site AMED_4594 IPR000086 NUDIX hydrolase domain AMED_4594 IPR020476 NUDIX hydrolase AMED_4594 IPR020605 Octanoyltransferase, conserved site AMED_4595 IPR002938 FAD-binding domain AMED_4595 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4596 IPR001647 DNA-binding HTH domain, TetR-type AMED_4596 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4596 IPR009057 Homeobox-like domain superfamily AMED_4596 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_4597 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_4597 IPR032312 Beta-galactosidase, domain 4 AMED_4597 IPR017853 Glycoside hydrolase superfamily AMED_4597 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_4597 IPR004199 Beta galactosidase small chain/ domain 5 AMED_4597 IPR023230 Glycoside hydrolase, family 2, conserved site AMED_4597 IPR008979 Galactose-binding-like domain superfamily AMED_4597 IPR011013 Galactose mutarotase-like domain superfamily AMED_4597 IPR013783 Immunoglobulin-like fold AMED_4597 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_4597 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase AMED_4597 IPR023232 Glycoside hydrolase, family 2, active site AMED_4597 IPR006101 Glycoside hydrolase, family 2 AMED_4597 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_4598 IPR028082 Periplasmic binding protein-like I AMED_4598 IPR000843 LacI-type HTH domain AMED_4598 IPR006377 Catabolite control protein A AMED_4598 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4599 IPR004840 Amino acid permease, conserved site AMED_4599 IPR004841 Amino acid permease/ SLC12A domain AMED_4600 IPR015868 Glutaminase AMED_4600 IPR012338 Beta-lactamase/transpeptidase-like AMED_4603 IPR026260 Threonine synthase, bacterial/archaeal AMED_4603 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_4603 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_4603 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_4603 IPR004450 Threonine synthase-like AMED_4604 IPR016039 Thiolase-like AMED_4604 IPR009081 Phosphopantetheine binding ACP domain AMED_4604 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4604 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4604 IPR018201 Beta-ketoacyl synthase, active site AMED_4604 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4604 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_4604 IPR036736 ACP-like superfamily AMED_4604 IPR014043 Acyl transferase AMED_4604 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_4604 IPR036291 NAD(P)-binding domain superfamily AMED_4604 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_4604 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4604 IPR013968 Polyketide synthase, ketoreductase domain AMED_4605 IPR018201 Beta-ketoacyl synthase, active site AMED_4605 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4605 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_4605 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_4605 IPR036291 NAD(P)-binding domain superfamily AMED_4605 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4605 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_4605 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4605 IPR011032 GroES-like superfamily AMED_4605 IPR009081 Phosphopantetheine binding ACP domain AMED_4605 IPR013149 Alcohol dehydrogenase, C-terminal AMED_4605 IPR020843 Polyketide synthase, enoylreductase domain AMED_4605 IPR013968 Polyketide synthase, ketoreductase domain AMED_4605 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4605 IPR016039 Thiolase-like AMED_4605 IPR006162 Phosphopantetheine attachment site AMED_4605 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_4605 IPR036736 ACP-like superfamily AMED_4605 IPR001227 Acyl transferase domain superfamily AMED_4605 IPR013154 Alcohol dehydrogenase, N-terminal AMED_4605 IPR014043 Acyl transferase AMED_4605 IPR020807 Polyketide synthase, dehydratase domain AMED_4606 IPR009081 Phosphopantetheine binding ACP domain AMED_4606 IPR003231 Acyl carrier protein (ACP) AMED_4606 IPR036736 ACP-like superfamily AMED_4607 IPR000073 Alpha/beta hydrolase fold-1 AMED_4607 IPR000639 Epoxide hydrolase-like AMED_4607 IPR029058 Alpha/Beta hydrolase fold AMED_4609 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4609 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4609 IPR036291 NAD(P)-binding domain superfamily AMED_4610 IPR011701 Major facilitator superfamily AMED_4610 IPR020846 Major facilitator superfamily domain AMED_4610 IPR036259 MFS transporter superfamily AMED_4610 IPR005829 Sugar transporter, conserved site AMED_4610 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4610 IPR036390 Winged helix DNA-binding domain superfamily AMED_4610 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_4612 IPR012340 Nucleic acid-binding, OB-fold AMED_4612 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_4612 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_4612 IPR014145 DNA ligase D, polymerase domain AMED_4612 IPR014146 DNA ligase D, ligase domain AMED_4612 IPR033649 LigD polymerase domain, MtLigD-type AMED_4612 IPR012310 DNA ligase, ATP-dependent, central AMED_4613 IPR020616 Thiolase, N-terminal AMED_4613 IPR016039 Thiolase-like AMED_4613 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_4613 IPR002155 Thiolase AMED_4613 IPR020613 Thiolase, conserved site AMED_4613 IPR020617 Thiolase, C-terminal AMED_4613 IPR020610 Thiolase, active site AMED_4613 IPR012805 Acetyl-CoA C-acyltransferase FadA AMED_4614 IPR002577 Helix-turn-helix, HxlR type AMED_4614 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4614 IPR036390 Winged helix DNA-binding domain superfamily AMED_4614 IPR011991 ArsR-like helix-turn-helix domain AMED_4615 IPR029070 Chitinase insertion domain superfamily AMED_4615 IPR036116 Fibronectin type III superfamily AMED_4615 IPR001579 Glycoside hydrolase, chitinase active site AMED_4615 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_4615 IPR017853 Glycoside hydrolase superfamily AMED_4615 IPR003610 Carbohydrate-binding module family 5/12 AMED_4615 IPR013783 Immunoglobulin-like fold AMED_4615 IPR003961 Fibronectin type III AMED_4615 IPR011583 Chitinase II AMED_4615 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_4616 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain AMED_4616 IPR036291 NAD(P)-binding domain superfamily AMED_4616 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMED_4619 IPR036390 Winged helix DNA-binding domain superfamily AMED_4619 IPR005119 LysR, substrate-binding AMED_4619 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain AMED_4619 IPR000847 Transcription regulator HTH, LysR AMED_4619 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4622 IPR023606 CoA-transferase family III domain superfamily AMED_4622 IPR003673 CoA-transferase family III AMED_4623 IPR003673 CoA-transferase family III AMED_4623 IPR023606 CoA-transferase family III domain superfamily AMED_4624 IPR006377 Catabolite control protein A AMED_4624 IPR028082 Periplasmic binding protein-like I AMED_4624 IPR000843 LacI-type HTH domain AMED_4624 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4626 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AMED_4626 IPR011650 Peptidase M20, dimerisation domain AMED_4626 IPR002933 Peptidase M20 AMED_4626 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AMED_4626 IPR036264 Bacterial exopeptidase dimerisation domain AMED_4627 IPR029058 Alpha/Beta hydrolase fold AMED_4627 IPR000073 Alpha/beta hydrolase fold-1 AMED_4627 IPR019913 Pyrimidine utilisation protein RutD AMED_4634 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_4634 IPR023210 NADP-dependent oxidoreductase domain AMED_4635 IPR036661 Luciferase-like domain superfamily AMED_4635 IPR011251 Luciferase-like domain AMED_4635 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_4636 IPR003824 Undecaprenyl-diphosphatase UppP AMED_4638 IPR001567 Peptidase M3A/M3B catalytic domain AMED_4638 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMED_4639 IPR029045 ClpP/crotonase-like domain superfamily AMED_4639 IPR001907 ATP-dependent Clp protease proteolytic subunit AMED_4639 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMED_4639 IPR033135 ClpP, histidine active site AMED_4640 IPR036291 NAD(P)-binding domain superfamily AMED_4640 IPR010945 Malate dehydrogenase, type 2 AMED_4640 IPR001557 L-lactate/malate dehydrogenase AMED_4640 IPR022383 Lactate/malate dehydrogenase, C-terminal AMED_4640 IPR001252 Malate dehydrogenase, active site AMED_4640 IPR001236 Lactate/malate dehydrogenase, N-terminal AMED_4640 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AMED_4647 IPR005887 Alpha-1,2-mannosidase, putative AMED_4647 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_4647 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_4647 IPR008928 Six-hairpin glycosidase superfamily AMED_4647 IPR012939 Glycosyl hydrolase family 92 AMED_4648 IPR011118 Tannase/feruloyl esterase AMED_4648 IPR029058 Alpha/Beta hydrolase fold AMED_4653 IPR011650 Peptidase M20, dimerisation domain AMED_4653 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AMED_4653 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AMED_4653 IPR036264 Bacterial exopeptidase dimerisation domain AMED_4653 IPR002933 Peptidase M20 AMED_4655 IPR039424 Solute-binding protein family 5 AMED_4655 IPR030678 Peptide/nickel binding protein, MppA-type AMED_4655 IPR023765 Solute-binding protein family 5, conserved site AMED_4655 IPR000914 Solute-binding protein family 5 domain AMED_4656 IPR035906 MetI-like superfamily AMED_4656 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4657 IPR035906 MetI-like superfamily AMED_4657 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMED_4657 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4658 IPR003593 AAA+ ATPase domain AMED_4658 IPR003439 ABC transporter-like AMED_4658 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4658 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_4658 IPR017871 ABC transporter, conserved site AMED_4659 IPR017822 Carotene biosynthesis-associated membrane protein, type-1 AMED_4661 IPR040449 LD-carboxypeptidase, N-terminal AMED_4661 IPR003507 Peptidase family S66 AMED_4661 IPR040921 LD-carboxypeptidase, C-terminal AMED_4661 IPR029062 Class I glutamine amidotransferase-like AMED_4661 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMED_4661 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal AMED_4662 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMED_4662 IPR011659 WD40-like Beta Propeller AMED_4662 IPR029058 Alpha/Beta hydrolase fold AMED_4662 IPR011042 Six-bladed beta-propeller, TolB-like AMED_4669 IPR036013 Band 7/SPFH domain superfamily AMED_4669 IPR018080 Band 7/stomatin-like, conserved site AMED_4669 IPR001972 Stomatin family AMED_4669 IPR001107 Band 7 domain AMED_4674 IPR011701 Major facilitator superfamily AMED_4674 IPR005828 Major facilitator, sugar transporter-like AMED_4674 IPR036259 MFS transporter superfamily AMED_4674 IPR004736 MFS transporter, metabolite:H symporter AMED_4674 IPR020846 Major facilitator superfamily domain AMED_4674 IPR005829 Sugar transporter, conserved site AMED_4676 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4676 IPR002938 FAD-binding domain AMED_4678 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4678 IPR001845 HTH ArsR-type DNA-binding domain AMED_4678 IPR011991 ArsR-like helix-turn-helix domain AMED_4678 IPR036390 Winged helix DNA-binding domain superfamily AMED_4680 IPR001647 DNA-binding HTH domain, TetR-type AMED_4680 IPR009057 Homeobox-like domain superfamily AMED_4689 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4689 IPR014284 RNA polymerase sigma-70 like domain AMED_4689 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_4689 IPR007627 RNA polymerase sigma-70 region 2 AMED_4689 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_4689 IPR013325 RNA polymerase sigma factor, region 2 AMED_4689 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4695 IPR001647 DNA-binding HTH domain, TetR-type AMED_4695 IPR009057 Homeobox-like domain superfamily AMED_4695 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_4696 IPR011051 RmlC-like cupin domain superfamily AMED_4696 IPR032783 AraC-type transcription regulator, ligand-binding domain AMED_4696 IPR014710 RmlC-like jelly roll fold AMED_4696 IPR018060 DNA binding HTH domain, AraC-type AMED_4696 IPR020449 Transcription regulator HTH, AraC- type AMED_4696 IPR009057 Homeobox-like domain superfamily AMED_4702 IPR014284 RNA polymerase sigma-70 like domain AMED_4702 IPR007627 RNA polymerase sigma-70 region 2 AMED_4702 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_4702 IPR013325 RNA polymerase sigma factor, region 2 AMED_4702 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_4702 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4702 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4704 IPR036396 Cytochrome P450 superfamily AMED_4704 IPR002397 Cytochrome P450, B-class AMED_4704 IPR001128 Cytochrome P450 AMED_4704 IPR017972 Cytochrome P450, conserved site AMED_4706 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4706 IPR025302 Domain of unknown function DUF4162 AMED_4706 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_4706 IPR017871 ABC transporter, conserved site AMED_4706 IPR003439 ABC transporter-like AMED_4706 IPR003593 AAA+ ATPase domain AMED_4708 IPR022138 Helicase SWF/SNF-related AMED_4708 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4708 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_4708 IPR038718 SNF2-like, N-terminal domain superfamily AMED_4708 IPR000330 SNF2-related, N-terminal domain AMED_4708 IPR001650 Helicase, C-terminal AMED_4710 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4710 IPR002938 FAD-binding domain AMED_4711 IPR001647 DNA-binding HTH domain, TetR-type AMED_4711 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4711 IPR009057 Homeobox-like domain superfamily AMED_4713 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_4713 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_4713 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_4713 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_4713 IPR041504 Adaptive response protein AidB, N-terminal AMED_4713 IPR034184 Putative acyl-CoA dehydrogenase AidB AMED_4713 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_4714 IPR041642 HTH-type transcriptional repressor KstR, C-terminal AMED_4714 IPR001647 DNA-binding HTH domain, TetR-type AMED_4714 IPR009057 Homeobox-like domain superfamily AMED_4717 IPR001387 Cro/C1-type helix-turn-helix domain AMED_4717 IPR011051 RmlC-like cupin domain superfamily AMED_4717 IPR014710 RmlC-like jelly roll fold AMED_4717 IPR013096 Cupin 2, conserved barrel AMED_4717 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_4718 IPR016181 Acyl-CoA N-acyltransferase AMED_4718 IPR000182 GNAT domain AMED_4720 IPR011991 ArsR-like helix-turn-helix domain AMED_4720 IPR036390 Winged helix DNA-binding domain superfamily AMED_4720 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4720 IPR001845 HTH ArsR-type DNA-binding domain AMED_4722 IPR010998 Integrase/recombinase, N-terminal AMED_4722 IPR004107 Integrase, SAM-like, N-terminal AMED_4722 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_4722 IPR011931 Tyrosine recombinase XerC AMED_4722 IPR023009 Tyrosine recombinase XerC/XerD AMED_4722 IPR002104 Integrase, catalytic domain AMED_4722 IPR013762 Integrase-like, catalytic domain superfamily AMED_4727 IPR001267 Thymidine kinase AMED_4727 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4728 IPR038638 RbpA superfamily AMED_4728 IPR025182 RNA polymerase-binding protein RbpA AMED_4729 IPR015797 NUDIX hydrolase-like domain superfamily AMED_4729 IPR000086 NUDIX hydrolase domain AMED_4729 IPR004385 Nucleoside diphosphate pyrophosphatase AMED_4731 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_4731 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_4731 IPR017810 Mycothiol biosynthesis protein, MshB AMED_4732 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4732 IPR039528 DPM1-like AMED_4732 IPR001173 Glycosyltransferase 2-like AMED_4733 IPR004563 Apolipoprotein N-acyltransferase AMED_4733 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4733 IPR003010 Carbon-nitrogen hydrolase AMED_4733 IPR036526 Carbon-nitrogen hydrolase superfamily AMED_4733 IPR001173 Glycosyltransferase 2-like AMED_4733 IPR039528 DPM1-like AMED_4734 IPR006680 Amidohydrolase-related AMED_4734 IPR004722 Dihydroorotase AMED_4734 IPR002195 Dihydroorotase, conserved site AMED_4734 IPR032466 Metal-dependent hydrolase AMED_4734 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_4735 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMED_4735 IPR007197 Radical SAM AMED_4735 IPR022459 Lysine-2,3-aminomutase AMED_4735 IPR013785 Aldolase-type TIM barrel AMED_4735 IPR025895 Lysine-2,3-aminomutase, C-terminal domain AMED_4738 IPR002818 DJ-1/PfpI AMED_4738 IPR009057 Homeobox-like domain superfamily AMED_4738 IPR018060 DNA binding HTH domain, AraC-type AMED_4738 IPR020449 Transcription regulator HTH, AraC- type AMED_4738 IPR018062 HTH domain AraC-type, conserved site AMED_4738 IPR029062 Class I glutamine amidotransferase-like AMED_4739 IPR002577 Helix-turn-helix, HxlR type AMED_4739 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4739 IPR036390 Winged helix DNA-binding domain superfamily AMED_4743 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4743 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4743 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4743 IPR019734 Tetratricopeptide repeat AMED_4743 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4743 IPR002182 NB-ARC AMED_4743 IPR005158 Bacterial transcriptional activator domain AMED_4743 IPR013026 Tetratricopeptide repeat-containing domain AMED_4743 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4745 IPR017146 Type 2 lantibiotic biosynthesis protein LanM AMED_4745 IPR012341 Six-hairpin glycosidase-like superfamily AMED_4745 IPR025410 Lantibiotic biosynthesis protein, dehydration domain AMED_4745 IPR007822 Lanthionine synthetase C-like AMED_4747 IPR005158 Bacterial transcriptional activator domain AMED_4747 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4747 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4747 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4747 IPR008984 SMAD/FHA domain superfamily AMED_4747 IPR000253 Forkhead-associated (FHA) domain AMED_4747 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4748 IPR035584 Amidophosphoribosyltransferase, N-terminal AMED_4748 IPR000836 Phosphoribosyltransferase domain AMED_4748 IPR017932 Glutamine amidotransferase type 2 domain AMED_4748 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_4748 IPR005854 Amidophosphoribosyltransferase AMED_4748 IPR029057 Phosphoribosyltransferase-like AMED_4750 IPR006396 Glutamate mutase epsilon subunit AMED_4750 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AMED_4750 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily AMED_4751 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_4751 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_4751 IPR012340 Nucleic acid-binding, OB-fold AMED_4751 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AMED_4751 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMED_4751 IPR004522 Asparagine-tRNA ligase AMED_4752 IPR013785 Aldolase-type TIM barrel AMED_4752 IPR024188 Glutamate synthase large subunit-like protein AMED_4752 IPR002932 Glutamate synthase domain AMED_4753 IPR010060 Non-ribosomal peptide synthase AMED_4753 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4753 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4753 IPR009081 Phosphopantetheine binding ACP domain AMED_4753 IPR036736 ACP-like superfamily AMED_4753 IPR006162 Phosphopantetheine attachment site AMED_4753 IPR010071 Amino acid adenylation domain AMED_4753 IPR001242 Condensation domain AMED_4753 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4753 IPR042099 AMP-dependent synthetase-like superfamily AMED_4753 IPR000873 AMP-dependent synthetase/ligase AMED_4753 IPR020845 AMP-binding, conserved site AMED_4755 IPR005786 Branched-chain amino acid aminotransferase II AMED_4755 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMED_4755 IPR033939 Branched-chain aminotransferase AMED_4755 IPR001544 Aminotransferase class IV AMED_4755 IPR018300 Aminotransferase, class IV, conserved site AMED_4757 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_4757 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_4757 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_4757 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_4757 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_4757 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_4757 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_4758 IPR000792 Transcription regulator LuxR, C-terminal AMED_4758 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4758 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4758 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4758 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4759 IPR023603 Threonine aldolase AMED_4759 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4759 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_4759 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4759 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase AMED_4760 IPR009049 Argininosuccinate lyase AMED_4760 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_4760 IPR003806 ATP-grasp fold, PylC-type AMED_4760 IPR008948 L-Aspartase-like AMED_4760 IPR022761 Fumarate lyase, N-terminal AMED_4760 IPR000362 Fumarate lyase family AMED_4760 IPR011761 ATP-grasp fold AMED_4760 IPR024083 Fumarase/histidase, N-terminal AMED_4761 IPR003806 ATP-grasp fold, PylC-type AMED_4761 IPR011761 ATP-grasp fold AMED_4761 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_4761 IPR024083 Fumarase/histidase, N-terminal AMED_4761 IPR000362 Fumarate lyase family AMED_4761 IPR022761 Fumarate lyase, N-terminal AMED_4761 IPR008948 L-Aspartase-like AMED_4761 IPR009049 Argininosuccinate lyase AMED_4762 IPR005857 Cystathionine beta-synthase AMED_4762 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_4762 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_4762 IPR000644 CBS domain AMED_4763 IPR001031 Thioesterase AMED_4763 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS AMED_4763 IPR029058 Alpha/Beta hydrolase fold AMED_4765 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_4765 IPR036291 NAD(P)-binding domain superfamily AMED_4765 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_4765 IPR022694 3-hydroxyacyl-CoA dehydrogenase AMED_4765 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_4765 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_4765 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_4766 IPR018201 Beta-ketoacyl synthase, active site AMED_4766 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_4766 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_4766 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_4766 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_4766 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_4766 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_4766 IPR001242 Condensation domain AMED_4766 IPR014043 Acyl transferase AMED_4766 IPR036736 ACP-like superfamily AMED_4766 IPR001227 Acyl transferase domain superfamily AMED_4766 IPR009081 Phosphopantetheine binding ACP domain AMED_4766 IPR016039 Thiolase-like AMED_4766 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4766 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4767 IPR010071 Amino acid adenylation domain AMED_4767 IPR036736 ACP-like superfamily AMED_4767 IPR000873 AMP-dependent synthetase/ligase AMED_4767 IPR009081 Phosphopantetheine binding ACP domain AMED_4767 IPR020845 AMP-binding, conserved site AMED_4767 IPR042099 AMP-dependent synthetase-like superfamily AMED_4767 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4767 IPR001242 Condensation domain AMED_4767 IPR010060 Non-ribosomal peptide synthase AMED_4767 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4767 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4767 IPR006162 Phosphopantetheine attachment site AMED_4768 IPR005153 MbtH-like domain AMED_4768 IPR038020 MbtH-like domain superfamily AMED_4768 IPR037407 MbtH-like protein AMED_4769 IPR020845 AMP-binding, conserved site AMED_4769 IPR042099 AMP-dependent synthetase-like superfamily AMED_4769 IPR006162 Phosphopantetheine attachment site AMED_4769 IPR000873 AMP-dependent synthetase/ligase AMED_4769 IPR036736 ACP-like superfamily AMED_4769 IPR001242 Condensation domain AMED_4769 IPR009081 Phosphopantetheine binding ACP domain AMED_4769 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4769 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4769 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4769 IPR010060 Non-ribosomal peptide synthase AMED_4769 IPR013120 Male sterility, NAD-binding AMED_4769 IPR010071 Amino acid adenylation domain AMED_4769 IPR010080 Thioester reductase-like domain AMED_4769 IPR036291 NAD(P)-binding domain superfamily AMED_4770 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4770 IPR001031 Thioesterase AMED_4770 IPR009081 Phosphopantetheine binding ACP domain AMED_4770 IPR020802 Polyketide synthase, thioesterase domain AMED_4770 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4770 IPR001242 Condensation domain AMED_4770 IPR042099 AMP-dependent synthetase-like superfamily AMED_4770 IPR000873 AMP-dependent synthetase/ligase AMED_4770 IPR020845 AMP-binding, conserved site AMED_4770 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4770 IPR036736 ACP-like superfamily AMED_4770 IPR029058 Alpha/Beta hydrolase fold AMED_4770 IPR010071 Amino acid adenylation domain AMED_4773 IPR010158 Amidase, carbamoylase-type AMED_4773 IPR002933 Peptidase M20 AMED_4773 IPR036264 Bacterial exopeptidase dimerisation domain AMED_4773 IPR011650 Peptidase M20, dimerisation domain AMED_4775 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4775 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4775 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_4775 IPR004839 Aminotransferase, class I/classII AMED_4776 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4776 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4776 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4776 IPR000792 Transcription regulator LuxR, C-terminal AMED_4776 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4777 IPR005119 LysR, substrate-binding AMED_4777 IPR036390 Winged helix DNA-binding domain superfamily AMED_4777 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4777 IPR000847 Transcription regulator HTH, LysR AMED_4777 IPR037416 Nodulation protein D, PBP2 AMED_4778 IPR002938 FAD-binding domain AMED_4778 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4779 IPR008979 Galactose-binding-like domain superfamily AMED_4779 IPR029058 Alpha/Beta hydrolase fold AMED_4779 IPR005674 CocE/Serine esterase AMED_4779 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_4779 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_4787 IPR029017 Enolase-like, N-terminal AMED_4787 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_4787 IPR029065 Enolase C-terminal domain-like AMED_4787 IPR034382 3,6-anhydro-alpha-L-galactonate cycloisomerase AMED_4787 IPR036849 Enolase-like, C-terminal domain superfamily AMED_4787 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_4788 IPR036390 Winged helix DNA-binding domain superfamily AMED_4788 IPR011711 GntR, C-terminal AMED_4788 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_4788 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4788 IPR000524 Transcription regulator HTH, GntR AMED_4789 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4789 IPR035906 MetI-like superfamily AMED_4790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_4790 IPR035906 MetI-like superfamily AMED_4791 IPR025161 Putative transposase IS4/IS5 family AMED_4793 IPR005153 MbtH-like domain AMED_4793 IPR038020 MbtH-like domain superfamily AMED_4793 IPR037407 MbtH-like protein AMED_4794 IPR001031 Thioesterase AMED_4794 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4794 IPR006162 Phosphopantetheine attachment site AMED_4794 IPR009081 Phosphopantetheine binding ACP domain AMED_4794 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4794 IPR001242 Condensation domain AMED_4794 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4794 IPR042099 AMP-dependent synthetase-like superfamily AMED_4794 IPR000873 AMP-dependent synthetase/ligase AMED_4794 IPR020845 AMP-binding, conserved site AMED_4794 IPR036736 ACP-like superfamily AMED_4794 IPR010071 Amino acid adenylation domain AMED_4794 IPR029058 Alpha/Beta hydrolase fold AMED_4795 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA AMED_4795 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_4795 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_4795 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMED_4796 IPR036291 NAD(P)-binding domain superfamily AMED_4796 IPR023401 Ornithine cyclodeaminase, N-terminal AMED_4796 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMED_4797 IPR006159 Methylmalonyl-CoA mutase, C-terminal AMED_4797 IPR006158 Cobalamin (vitamin B12)-binding domain AMED_4797 IPR006394 Glutamate mutase sigma subunit AMED_4797 IPR036724 Cobalamin-binding domain superfamily AMED_4798 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily AMED_4798 IPR006396 Glutamate mutase epsilon subunit AMED_4798 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AMED_4800 IPR036736 ACP-like superfamily AMED_4800 IPR029058 Alpha/Beta hydrolase fold AMED_4800 IPR010071 Amino acid adenylation domain AMED_4800 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4800 IPR001242 Condensation domain AMED_4800 IPR001031 Thioesterase AMED_4800 IPR020802 Polyketide synthase, thioesterase domain AMED_4800 IPR009081 Phosphopantetheine binding ACP domain AMED_4800 IPR000873 AMP-dependent synthetase/ligase AMED_4800 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4800 IPR020845 AMP-binding, conserved site AMED_4800 IPR042099 AMP-dependent synthetase-like superfamily AMED_4800 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4804 IPR006162 Phosphopantetheine attachment site AMED_4804 IPR009081 Phosphopantetheine binding ACP domain AMED_4804 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_4804 IPR010071 Amino acid adenylation domain AMED_4804 IPR036736 ACP-like superfamily AMED_4804 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4804 IPR020845 AMP-binding, conserved site AMED_4804 IPR000873 AMP-dependent synthetase/ligase AMED_4804 IPR042099 AMP-dependent synthetase-like superfamily AMED_4804 IPR001242 Condensation domain AMED_4804 IPR010060 Non-ribosomal peptide synthase AMED_4804 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_4805 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4805 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4805 IPR019734 Tetratricopeptide repeat AMED_4805 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4805 IPR005158 Bacterial transcriptional activator domain AMED_4805 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4805 IPR002182 NB-ARC AMED_4807 IPR005158 Bacterial transcriptional activator domain AMED_4807 IPR002182 NB-ARC AMED_4807 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4807 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4807 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_4807 IPR019734 Tetratricopeptide repeat AMED_4807 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4807 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4809 IPR011789 Cu(I)-responsive transcriptional regulator AMED_4809 IPR015358 Transcription regulator MerR, DNA binding AMED_4809 IPR009061 Putative DNA-binding domain superfamily AMED_4809 IPR000551 MerR-type HTH domain AMED_4817 IPR035992 Ricin B-like lectins AMED_4817 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_4817 IPR000772 Ricin B, lectin domain AMED_4817 IPR005193 Glycoside hydrolase, family 62, arabinosidase AMED_4819 IPR002401 Cytochrome P450, E-class, group I AMED_4819 IPR036396 Cytochrome P450 superfamily AMED_4819 IPR001128 Cytochrome P450 AMED_4823 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D AMED_4823 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_4823 IPR001279 Metallo-beta-lactamase AMED_4826 IPR011006 CheY-like superfamily AMED_4826 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4826 IPR000792 Transcription regulator LuxR, C-terminal AMED_4826 IPR001789 Signal transduction response regulator, receiver domain AMED_4827 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4827 IPR000792 Transcription regulator LuxR, C-terminal AMED_4827 IPR001789 Signal transduction response regulator, receiver domain AMED_4827 IPR016032 Signal transduction response regulator, C-terminal effector AMED_4827 IPR011006 CheY-like superfamily AMED_4829 IPR011042 Six-bladed beta-propeller, TolB-like AMED_4829 IPR036752 TolB, N-terminal domain superfamily AMED_4829 IPR014167 Tol-Pal system protein TolB AMED_4829 IPR007195 TolB, N-terminal AMED_4829 IPR011659 WD40-like Beta Propeller AMED_4845 IPR003960 ATPase, AAA-type, conserved site AMED_4845 IPR003959 ATPase, AAA-type, core AMED_4845 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4845 IPR032501 Proteasomal ATPase OB C-terminal domain AMED_4845 IPR041626 Proteasomal ATPase, N-terminal OB domain AMED_4845 IPR022482 Proteasome ATPase AMED_4845 IPR003593 AAA+ ATPase domain AMED_4850 IPR006680 Amidohydrolase-related AMED_4850 IPR032466 Metal-dependent hydrolase AMED_4850 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_4850 IPR023512 Deaminase MtaD/DadD AMED_4851 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR AMED_4851 IPR036390 Winged helix DNA-binding domain superfamily AMED_4851 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4851 IPR005471 Transcription regulator IclR, N-terminal AMED_4851 IPR014757 Transcription regulator IclR, C-terminal AMED_4851 IPR029016 GAF-like domain superfamily AMED_4852 IPR003673 CoA-transferase family III AMED_4852 IPR023606 CoA-transferase family III domain superfamily AMED_4854 IPR039390 Hydroxyquinol/catechol 1,2-dioxygenase AMED_4854 IPR007535 Catechol dioxygenase, N-terminal AMED_4854 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AMED_4854 IPR015889 Intradiol ring-cleavage dioxygenase, core AMED_4858 IPR003610 Carbohydrate-binding module family 5/12 AMED_4858 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_4858 IPR017853 Glycoside hydrolase superfamily AMED_4860 IPR015854 ABC transporter, lipoprotein release, LolD AMED_4860 IPR017871 ABC transporter, conserved site AMED_4860 IPR003439 ABC transporter-like AMED_4860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4860 IPR003593 AAA+ ATPase domain AMED_4861 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4861 IPR015854 ABC transporter, lipoprotein release, LolD AMED_4861 IPR017871 ABC transporter, conserved site AMED_4861 IPR003439 ABC transporter-like AMED_4861 IPR003593 AAA+ ATPase domain AMED_4862 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_4862 IPR002938 FAD-binding domain AMED_4864 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4864 IPR036291 NAD(P)-binding domain superfamily AMED_4864 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4865 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4865 IPR036390 Winged helix DNA-binding domain superfamily AMED_4865 IPR005119 LysR, substrate-binding AMED_4865 IPR000847 Transcription regulator HTH, LysR AMED_4867 IPR003680 Flavodoxin-like fold AMED_4867 IPR023048 NADH-azoreductase, FMN-dependent AMED_4867 IPR029039 Flavoprotein-like superfamily AMED_4868 IPR001647 DNA-binding HTH domain, TetR-type AMED_4868 IPR009057 Homeobox-like domain superfamily AMED_4868 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_4872 IPR036390 Winged helix DNA-binding domain superfamily AMED_4872 IPR011991 ArsR-like helix-turn-helix domain AMED_4872 IPR019888 Transcription regulator AsnC-type AMED_4872 IPR000485 AsnC-type HTH domain AMED_4872 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_4872 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4872 IPR011008 Dimeric alpha-beta barrel AMED_4873 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMED_4873 IPR036005 Creatinase/aminopeptidase-like AMED_4873 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMED_4873 IPR000587 Creatinase, N-terminal AMED_4873 IPR000994 Peptidase M24 AMED_4874 IPR020045 DNA polymerase I-like, H3TH domain AMED_4874 IPR038969 Flap endonuclease AMED_4874 IPR029060 PIN-like domain superfamily AMED_4874 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMED_4874 IPR002421 5'-3' exonuclease, N-terminal AMED_4874 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AMED_4874 IPR008918 Helix-hairpin-helix motif, class 2 AMED_4875 IPR025559 Enhanced intracellular survival protein domain AMED_4875 IPR000182 GNAT domain AMED_4875 IPR041380 Eis-like, acetyltransferase domain AMED_4875 IPR016181 Acyl-CoA N-acyltransferase AMED_4875 IPR036527 SCP2 sterol-binding domain superfamily AMED_4875 IPR022902 N-acetyltransferase Eis AMED_4876 IPR000182 GNAT domain AMED_4876 IPR022902 N-acetyltransferase Eis AMED_4876 IPR036527 SCP2 sterol-binding domain superfamily AMED_4876 IPR025559 Enhanced intracellular survival protein domain AMED_4876 IPR016181 Acyl-CoA N-acyltransferase AMED_4876 IPR041380 Eis-like, acetyltransferase domain AMED_4878 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4878 IPR001650 Helicase, C-terminal AMED_4878 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal AMED_4878 IPR011545 DEAD/DEAH box helicase domain AMED_4878 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_4880 IPR005218 Diacylglycerol/lipid kinase AMED_4880 IPR001206 Diacylglycerol kinase, catalytic domain AMED_4880 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMED_4880 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMED_4881 IPR002033 Sec-independent periplasmic protein translocase TatC AMED_4881 IPR019820 Sec-independent periplasmic protein translocase, conserved site AMED_4882 IPR006312 Sec-independent protein translocase protein TatA/E AMED_4882 IPR003369 Sec-independent protein translocase protein TatA/B/E AMED_4884 IPR028349 Protein PafC AMED_4884 IPR026881 WYL domain AMED_4885 IPR026881 WYL domain AMED_4886 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4886 IPR002577 Helix-turn-helix, HxlR type AMED_4886 IPR036390 Winged helix DNA-binding domain superfamily AMED_4888 IPR036291 NAD(P)-binding domain superfamily AMED_4888 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4890 IPR022279 Pup--protein ligase AMED_4890 IPR004347 Pup ligase/deamidase AMED_4893 IPR001353 Proteasome, subunit alpha/beta AMED_4893 IPR022296 Proteasome, alpha subunit, bacterial AMED_4893 IPR023332 Proteasome alpha-type subunit AMED_4893 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_4894 IPR001353 Proteasome, subunit alpha/beta AMED_4894 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria AMED_4894 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_4894 IPR023333 Proteasome B-type subunit AMED_4895 IPR008515 Ubiquitin-like, Pup AMED_4896 IPR004347 Pup ligase/deamidase AMED_4896 IPR022366 Pup deamidase AMED_4897 IPR024195 NUDIX hydrolase, YfcD, predicted AMED_4897 IPR000086 NUDIX hydrolase domain AMED_4897 IPR020084 NUDIX hydrolase, conserved site AMED_4897 IPR015797 NUDIX hydrolase-like domain superfamily AMED_4901 IPR001845 HTH ArsR-type DNA-binding domain AMED_4901 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4901 IPR011991 ArsR-like helix-turn-helix domain AMED_4901 IPR036390 Winged helix DNA-binding domain superfamily AMED_4904 IPR000620 EamA domain AMED_4905 IPR003960 ATPase, AAA-type, conserved site AMED_4905 IPR041626 Proteasomal ATPase, N-terminal OB domain AMED_4905 IPR032501 Proteasomal ATPase OB C-terminal domain AMED_4905 IPR003959 ATPase, AAA-type, core AMED_4905 IPR003593 AAA+ ATPase domain AMED_4905 IPR022482 Proteasome ATPase AMED_4905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4909 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4909 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 AMED_4910 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS AMED_4910 IPR000644 CBS domain AMED_4910 IPR008915 Peptidase M50 AMED_4913 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4913 IPR025669 AAA domain AMED_4914 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMED_4914 IPR013115 Histidine biosynthesis HisG, C-terminal AMED_4914 IPR020621 ATP phosphoribosyltransferase HisG, long form AMED_4914 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMED_4914 IPR001348 ATP phosphoribosyltransferase HisG AMED_4914 IPR013820 ATP phosphoribosyltransferase, catalytic domain AMED_4914 IPR018198 ATP phosphoribosyltransferase, conserved site AMED_4915 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AMED_4915 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AMED_4916 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AMED_4916 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4916 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AMED_4916 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AMED_4916 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMED_4916 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AMED_4916 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMED_4917 IPR018062 HTH domain AraC-type, conserved site AMED_4917 IPR035451 Ada-like domain superfamily AMED_4917 IPR004026 Ada DNA repair, metal-binding AMED_4917 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMED_4917 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AMED_4917 IPR003265 HhH-GPD domain AMED_4917 IPR009057 Homeobox-like domain superfamily AMED_4917 IPR011257 DNA glycosylase AMED_4917 IPR018060 DNA binding HTH domain, AraC-type AMED_4917 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMED_4918 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_4918 IPR023214 HAD superfamily AMED_4918 IPR006439 HAD hydrolase, subfamily IA AMED_4918 IPR036412 HAD-like superfamily AMED_4918 IPR041492 Haloacid dehalogenase-like hydrolase AMED_4919 IPR011005 Dihydropteroate synthase-like AMED_4919 IPR006158 Cobalamin (vitamin B12)-binding domain AMED_4919 IPR036724 Cobalamin-binding domain superfamily AMED_4919 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AMED_4919 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMED_4919 IPR003726 Homocysteine-binding domain AMED_4919 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AMED_4919 IPR000489 Pterin-binding domain AMED_4919 IPR036594 Methionine synthase domain AMED_4919 IPR036589 Homocysteine-binding domain superfamily AMED_4919 IPR011822 Cobalamin-dependent methionine synthase AMED_4919 IPR033706 Methionine synthase, B12-binding domain AMED_4923 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_4925 IPR001466 Beta-lactamase-related AMED_4925 IPR012338 Beta-lactamase/transpeptidase-like AMED_4926 IPR011701 Major facilitator superfamily AMED_4926 IPR036259 MFS transporter superfamily AMED_4926 IPR020846 Major facilitator superfamily domain AMED_4929 IPR017871 ABC transporter, conserved site AMED_4929 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4929 IPR003593 AAA+ ATPase domain AMED_4929 IPR003439 ABC transporter-like AMED_4930 IPR017812 Mycothiol ligase MshC AMED_4930 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AMED_4930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_4930 IPR032678 tRNA synthetases class I, catalytic domain AMED_4931 IPR012925 TipAS antibiotic-recognition domain AMED_4931 IPR009061 Putative DNA-binding domain superfamily AMED_4931 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain AMED_4931 IPR000551 MerR-type HTH domain AMED_4932 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_4932 IPR032466 Metal-dependent hydrolase AMED_4932 IPR006680 Amidohydrolase-related AMED_4932 IPR026912 Adenine deaminase C-terminal domain AMED_4932 IPR006679 Adenine deaminase AMED_4933 IPR002035 von Willebrand factor, type A AMED_4933 IPR036465 von Willebrand factor A-like domain superfamily AMED_4934 IPR041628 ChlI/MoxR, AAA lid domain AMED_4934 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4934 IPR000523 Magnesium chelatase ChlI domain AMED_4934 IPR011775 Magnesium chelatase, ATPase subunit I AMED_4934 IPR003593 AAA+ ATPase domain AMED_4937 IPR019772 Ferrochelatase, active site AMED_4937 IPR033659 Ferrochelatase, N-terminal AMED_4937 IPR033644 Ferrochelatase, C-terminal AMED_4937 IPR001015 Ferrochelatase AMED_4939 IPR011701 Major facilitator superfamily AMED_4939 IPR020846 Major facilitator superfamily domain AMED_4939 IPR036259 MFS transporter superfamily AMED_4940 IPR036291 NAD(P)-binding domain superfamily AMED_4940 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) AMED_4941 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_4941 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_4941 IPR036291 NAD(P)-binding domain superfamily AMED_4942 IPR005829 Sugar transporter, conserved site AMED_4942 IPR004736 MFS transporter, metabolite:H symporter AMED_4942 IPR036259 MFS transporter superfamily AMED_4942 IPR005828 Major facilitator, sugar transporter-like AMED_4942 IPR020846 Major facilitator superfamily domain AMED_4943 IPR011006 CheY-like superfamily AMED_4943 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4943 IPR039420 Transcriptional regulatory protein WalR-like AMED_4943 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_4943 IPR001789 Signal transduction response regulator, receiver domain AMED_4944 IPR005467 Histidine kinase domain AMED_4944 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_4944 IPR003594 Histidine kinase/HSP90-like ATPase AMED_4944 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_4944 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_4944 IPR003660 HAMP domain AMED_4944 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_4947 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_4947 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMED_4947 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AMED_4947 IPR029028 Alpha/beta knot methyltransferases AMED_4949 IPR024163 Aerotolerance regulator, N-terminal AMED_4949 IPR022933 Uncharacterised protein family UPF0353 AMED_4949 IPR002035 von Willebrand factor, type A AMED_4949 IPR036465 von Willebrand factor A-like domain superfamily AMED_4950 IPR002881 Domain of unknown function DUF58 AMED_4950 IPR036465 von Willebrand factor A-like domain superfamily AMED_4951 IPR041628 ChlI/MoxR, AAA lid domain AMED_4951 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_4951 IPR011703 ATPase, AAA-3 AMED_4952 IPR013482 Molybdenum cofactor guanylyltransferase AMED_4952 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4952 IPR025877 MobA-like NTP transferase AMED_4953 IPR003333 Mycolic acid cyclopropane synthase AMED_4953 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4954 IPR038765 Papain-like cysteine peptidase superfamily AMED_4954 IPR000064 Endopeptidase, NLPC/P60 domain AMED_4955 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AMED_4955 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMED_4955 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMED_4955 IPR036008 Aconitase, iron-sulfur domain AMED_4955 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMED_4955 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMED_4956 IPR003416 MgtC/SapB/SrpB/YhiD family AMED_4958 IPR009057 Homeobox-like domain superfamily AMED_4958 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4958 IPR001647 DNA-binding HTH domain, TetR-type AMED_4959 IPR029058 Alpha/Beta hydrolase fold AMED_4959 IPR000073 Alpha/beta hydrolase fold-1 AMED_4961 IPR035094 Histidine N-alpha-methyltransferase AMED_4961 IPR017804 Methyltransferase EgtD-like AMED_4961 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_4961 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type AMED_4961 IPR019257 Histidine-specific methyltransferase, SAM-dependent AMED_4963 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_4963 IPR016187 C-type lectin fold AMED_4963 IPR024775 DinB-like domain AMED_4963 IPR042095 Sulfatase-modifying factor enzyme superfamily AMED_4963 IPR005532 Sulfatase-modifying factor enzyme AMED_4963 IPR032890 Hercynine oxygenase, Actinobacteria AMED_4963 IPR017806 Ergothioneine biosynthesis protein EgtB AMED_4964 IPR035434 Glutamate--cysteine ligase, bacteria and plant AMED_4964 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_4964 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_4964 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria AMED_4965 IPR005119 LysR, substrate-binding AMED_4965 IPR000847 Transcription regulator HTH, LysR AMED_4965 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_4965 IPR036390 Winged helix DNA-binding domain superfamily AMED_4966 IPR036291 NAD(P)-binding domain superfamily AMED_4966 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AMED_4966 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AMED_4966 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AMED_4966 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AMED_4966 IPR033524 Leu/Phe/Val dehydrogenases active site AMED_4966 IPR014362 Glutamate dehydrogenase AMED_4967 IPR029058 Alpha/Beta hydrolase fold AMED_4967 IPR000073 Alpha/beta hydrolase fold-1 AMED_4967 IPR002410 Peptidase S33 AMED_4967 IPR005944 Proline iminopeptidase AMED_4972 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_4972 IPR001647 DNA-binding HTH domain, TetR-type AMED_4972 IPR009057 Homeobox-like domain superfamily AMED_4973 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_4973 IPR005170 Transporter-associated domain AMED_4973 IPR036318 FAD-binding, type PCMH-like superfamily AMED_4973 IPR000644 CBS domain AMED_4973 IPR002550 CNNM, transmembrane domain AMED_4974 IPR002550 CNNM, transmembrane domain AMED_4974 IPR000644 CBS domain AMED_4977 IPR018170 Aldo/keto reductase, conserved site AMED_4977 IPR020471 Aldo/keto reductase AMED_4977 IPR023210 NADP-dependent oxidoreductase domain AMED_4977 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_4980 IPR005886 UDP-glucose 4-epimerase AMED_4980 IPR001509 NAD-dependent epimerase/dehydratase AMED_4980 IPR036291 NAD(P)-binding domain superfamily AMED_4981 IPR001173 Glycosyltransferase 2-like AMED_4981 IPR029044 Nucleotide-diphospho-sugar transferases AMED_4982 IPR005888 dTDP-glucose 4,6-dehydratase AMED_4982 IPR016040 NAD(P)-binding domain AMED_4982 IPR036291 NAD(P)-binding domain superfamily AMED_4983 IPR003437 Glycine dehydrogenase (decarboxylating) AMED_4983 IPR020581 Glycine cleavage system P protein AMED_4983 IPR015424 Pyridoxal phosphate-dependent transferase AMED_4983 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_4983 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_4984 IPR000551 MerR-type HTH domain AMED_4984 IPR009061 Putative DNA-binding domain superfamily AMED_4986 IPR013766 Thioredoxin domain AMED_4986 IPR005746 Thioredoxin AMED_4986 IPR017937 Thioredoxin, conserved site AMED_4986 IPR036249 Thioredoxin-like superfamily AMED_4987 IPR011789 Cu(I)-responsive transcriptional regulator AMED_4987 IPR009061 Putative DNA-binding domain superfamily AMED_4987 IPR000551 MerR-type HTH domain AMED_4988 IPR003729 Bifunctional nuclease domain AMED_4988 IPR036104 Bifunctional nuclease superfamily AMED_4989 IPR000551 MerR-type HTH domain AMED_4989 IPR009061 Putative DNA-binding domain superfamily AMED_4990 IPR008984 SMAD/FHA domain superfamily AMED_4990 IPR000253 Forkhead-associated (FHA) domain AMED_4991 IPR000089 Biotin/lipoyl attachment AMED_4991 IPR002930 Glycine cleavage system H-protein AMED_4991 IPR033753 Glycine cleavage system H-protein/Simiate AMED_4991 IPR017453 Glycine cleavage system H-protein, subgroup AMED_4991 IPR011053 Single hybrid motif AMED_4991 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMED_4992 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AMED_4992 IPR000462 CDP-alcohol phosphatidyltransferase AMED_4996 IPR042099 AMP-dependent synthetase-like superfamily AMED_4996 IPR000873 AMP-dependent synthetase/ligase AMED_4996 IPR020845 AMP-binding, conserved site AMED_4996 IPR025110 AMP-binding enzyme, C-terminal domain AMED_4997 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_4997 IPR029045 ClpP/crotonase-like domain superfamily AMED_4997 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_4997 IPR001753 Enoyl-CoA hydratase/isomerase AMED_4998 IPR000639 Epoxide hydrolase-like AMED_4998 IPR029058 Alpha/Beta hydrolase fold AMED_4998 IPR000073 Alpha/beta hydrolase fold-1 AMED_4999 IPR036291 NAD(P)-binding domain superfamily AMED_4999 IPR012409 Sirohaem synthase AMED_4999 IPR019478 Sirohaem synthase, dimerisation domain AMED_4999 IPR006367 Sirohaem synthase, N-terminal AMED_4999 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AMED_4999 IPR006366 Uroporphyrin-III C-methyltransferase AMED_4999 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_4999 IPR035996 Tetrapyrrole methylase superfamily AMED_4999 IPR000878 Tetrapyrrole methylase AMED_4999 IPR037115 Sirohaem synthase, dimerisation domain superfamily AMED_4999 IPR014776 Tetrapyrrole methylase, subdomain 2 AMED_5002 IPR001209 Ribosomal protein S14 AMED_5002 IPR023036 Ribosomal protein S14, bacterial/plastid AMED_5003 IPR001705 Ribosomal protein L33 AMED_5003 IPR038584 Ribosomal protein L33 superfamily AMED_5003 IPR011332 Zinc-binding ribosomal protein AMED_5003 IPR018264 Ribosomal protein L33, conserved site AMED_5005 IPR027493 Ribosomal protein L31 type B AMED_5005 IPR034704 L28p-like AMED_5005 IPR002150 Ribosomal protein L31 AMED_5005 IPR042105 Ribosomal protein L31 superfamily AMED_5006 IPR011332 Zinc-binding ribosomal protein AMED_5006 IPR002677 Ribosomal protein L32p AMED_5009 IPR036259 MFS transporter superfamily AMED_5009 IPR020846 Major facilitator superfamily domain AMED_5009 IPR011701 Major facilitator superfamily AMED_5009 IPR004638 Drug resistance transporter EmrB-like AMED_5010 IPR029058 Alpha/Beta hydrolase fold AMED_5010 IPR002925 Dienelactone hydrolase AMED_5012 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_5012 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_5012 IPR015424 Pyridoxal phosphate-dependent transferase AMED_5012 IPR002129 Pyridoxal phosphate-dependent decarboxylase AMED_5013 IPR039672 Lactose permease-like AMED_5013 IPR020846 Major facilitator superfamily domain AMED_5013 IPR036259 MFS transporter superfamily AMED_5013 IPR018043 Sodium:galactoside symporter, conserved site AMED_5013 IPR001927 Sodium:galactoside symporter AMED_5014 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_5014 IPR011251 Luciferase-like domain AMED_5014 IPR036661 Luciferase-like domain superfamily AMED_5021 IPR036661 Luciferase-like domain superfamily AMED_5021 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent AMED_5021 IPR011251 Luciferase-like domain AMED_5023 IPR003593 AAA+ ATPase domain AMED_5023 IPR003439 ABC transporter-like AMED_5023 IPR017871 ABC transporter, conserved site AMED_5023 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5023 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AMED_5024 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5024 IPR035906 MetI-like superfamily AMED_5025 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_5025 IPR001279 Metallo-beta-lactamase AMED_5025 IPR017782 Hydroxyacylglutathione hydrolase AMED_5025 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AMED_5025 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AMED_5025 IPR001018 Beta-lactamase, class-B, conserved site AMED_5026 IPR002319 Phenylalanyl-tRNA synthetase AMED_5026 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AMED_5026 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AMED_5026 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMED_5026 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_5026 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AMED_5029 IPR003593 AAA+ ATPase domain AMED_5029 IPR011527 ABC transporter type 1, transmembrane domain AMED_5029 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5029 IPR003439 ABC transporter-like AMED_5029 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5029 IPR017871 ABC transporter, conserved site AMED_5029 IPR039421 Type I protein exporter AMED_5030 IPR011527 ABC transporter type 1, transmembrane domain AMED_5030 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5030 IPR003593 AAA+ ATPase domain AMED_5030 IPR017871 ABC transporter, conserved site AMED_5030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5030 IPR039421 Type I protein exporter AMED_5030 IPR003439 ABC transporter-like AMED_5031 IPR037407 MbtH-like protein AMED_5031 IPR038020 MbtH-like domain superfamily AMED_5031 IPR005153 MbtH-like domain AMED_5033 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_5033 IPR003190 Aspartate decarboxylase AMED_5034 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_5034 IPR000873 AMP-dependent synthetase/ligase AMED_5034 IPR042099 AMP-dependent synthetase-like superfamily AMED_5034 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5034 IPR001242 Condensation domain AMED_5034 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_5034 IPR009081 Phosphopantetheine binding ACP domain AMED_5034 IPR006162 Phosphopantetheine attachment site AMED_5034 IPR036736 ACP-like superfamily AMED_5034 IPR010071 Amino acid adenylation domain AMED_5034 IPR010060 Non-ribosomal peptide synthase AMED_5034 IPR020845 AMP-binding, conserved site AMED_5035 IPR037294 ABC transporter, BtuC-like AMED_5035 IPR000522 ABC transporter, permease protein, BtuC-like AMED_5036 IPR000522 ABC transporter, permease protein, BtuC-like AMED_5036 IPR037294 ABC transporter, BtuC-like AMED_5037 IPR003593 AAA+ ATPase domain AMED_5037 IPR003439 ABC transporter-like AMED_5037 IPR017871 ABC transporter, conserved site AMED_5037 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5039 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5039 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AMED_5040 IPR036291 NAD(P)-binding domain superfamily AMED_5040 IPR011034 Formyl transferase-like, C-terminal domain superfamily AMED_5040 IPR002376 Formyl transferase, N-terminal AMED_5040 IPR005793 Formyl transferase, C-terminal AMED_5040 IPR001509 NAD-dependent epimerase/dehydratase AMED_5040 IPR021168 Bifunctional polymyxin resistance protein, ArnA AMED_5040 IPR036477 Formyl transferase, N-terminal domain superfamily AMED_5042 IPR038417 Alpha-galactosidase, N-terminal domain superfamily AMED_5042 IPR013780 Glycosyl hydrolase, all-beta AMED_5042 IPR031704 Glycosyl hydrolase family 36, N-terminal AMED_5042 IPR031705 Glycosyl hydrolase family 36, C-terminal AMED_5042 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_5042 IPR002252 Glycoside hydrolase family 36 AMED_5042 IPR017853 Glycoside hydrolase superfamily AMED_5042 IPR013785 Aldolase-type TIM barrel AMED_5044 IPR035906 MetI-like superfamily AMED_5044 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5045 IPR035906 MetI-like superfamily AMED_5045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5046 IPR003593 AAA+ ATPase domain AMED_5046 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5046 IPR003439 ABC transporter-like AMED_5046 IPR017871 ABC transporter, conserved site AMED_5046 IPR032781 ABC-transporter extension domain AMED_5048 IPR001753 Enoyl-CoA hydratase/isomerase AMED_5048 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_5048 IPR029045 ClpP/crotonase-like domain superfamily AMED_5048 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_5049 IPR003961 Fibronectin type III AMED_5049 IPR013783 Immunoglobulin-like fold AMED_5049 IPR017853 Glycoside hydrolase superfamily AMED_5049 IPR001579 Glycoside hydrolase, chitinase active site AMED_5049 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_5049 IPR036116 Fibronectin type III superfamily AMED_5049 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5049 IPR011583 Chitinase II AMED_5049 IPR018366 Carbohydrate-binding type-2, conserved site AMED_5049 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5049 IPR001919 Carbohydrate-binding type-2 domain AMED_5049 IPR029070 Chitinase insertion domain superfamily AMED_5050 IPR013762 Integrase-like, catalytic domain superfamily AMED_5050 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_5050 IPR010998 Integrase/recombinase, N-terminal AMED_5050 IPR002104 Integrase, catalytic domain AMED_5054 IPR025161 Putative transposase IS4/IS5 family AMED_5057 IPR002104 Integrase, catalytic domain AMED_5057 IPR010998 Integrase/recombinase, N-terminal AMED_5057 IPR013762 Integrase-like, catalytic domain superfamily AMED_5057 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_5062 IPR008963 Purple acid phosphatase-like, N-terminal AMED_5062 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_5062 IPR029052 Metallo-dependent phosphatase-like AMED_5062 IPR039331 Purple acid phosphatase-like AMED_5062 IPR015914 Purple acid phosphatase, N-terminal AMED_5062 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_5063 IPR000757 Glycoside hydrolase family 16 AMED_5063 IPR008263 Glycoside hydrolase, family 16, active site AMED_5063 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_5064 IPR001000 Glycoside hydrolase family 10 domain AMED_5064 IPR001919 Carbohydrate-binding type-2 domain AMED_5064 IPR017853 Glycoside hydrolase superfamily AMED_5064 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5064 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5065 IPR000600 ROK family AMED_5065 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5065 IPR036390 Winged helix DNA-binding domain superfamily AMED_5065 IPR000835 MarR-type HTH domain AMED_5066 IPR029018 Beta-hexosaminidase-like, domain 2 AMED_5066 IPR017853 Glycoside hydrolase superfamily AMED_5066 IPR015883 Glycoside hydrolase family 20, catalytic domain AMED_5066 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMED_5066 IPR025705 Beta-hexosaminidase AMED_5067 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_5067 IPR017853 Glycoside hydrolase superfamily AMED_5067 IPR013783 Immunoglobulin-like fold AMED_5067 IPR008979 Galactose-binding-like domain superfamily AMED_5067 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_5067 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AMED_5067 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_5067 IPR028829 Exo-beta-D-glucosaminidase AMED_5068 IPR008928 Six-hairpin glycosidase superfamily AMED_5068 IPR002037 Glycoside hydrolase, family 8 AMED_5068 IPR019834 Glycoside hydrolase, family 8, conserved site AMED_5068 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5071 IPR034603 Dipeptide epimerase AMED_5071 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_5071 IPR029065 Enolase C-terminal domain-like AMED_5071 IPR029017 Enolase-like, N-terminal AMED_5071 IPR036849 Enolase-like, C-terminal domain superfamily AMED_5071 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_5072 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5072 IPR000843 LacI-type HTH domain AMED_5072 IPR006377 Catabolite control protein A AMED_5072 IPR028082 Periplasmic binding protein-like I AMED_5073 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_5073 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_5073 IPR034603 Dipeptide epimerase AMED_5073 IPR029065 Enolase C-terminal domain-like AMED_5073 IPR029017 Enolase-like, N-terminal AMED_5073 IPR036849 Enolase-like, C-terminal domain superfamily AMED_5074 IPR035906 MetI-like superfamily AMED_5074 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5076 IPR003593 AAA+ ATPase domain AMED_5076 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5076 IPR015859 ABC transporter, taurine import, TauD AMED_5076 IPR003439 ABC transporter-like AMED_5076 IPR017871 ABC transporter, conserved site AMED_5077 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5077 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5077 IPR003660 HAMP domain AMED_5077 IPR005467 Histidine kinase domain AMED_5077 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_5077 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_5077 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5078 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5078 IPR039420 Transcriptional regulatory protein WalR-like AMED_5078 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5078 IPR001789 Signal transduction response regulator, receiver domain AMED_5078 IPR011006 CheY-like superfamily AMED_5082 IPR029058 Alpha/Beta hydrolase fold AMED_5082 IPR016292 Epoxide hydrolase AMED_5082 IPR000639 Epoxide hydrolase-like AMED_5082 IPR000073 Alpha/beta hydrolase fold-1 AMED_5083 IPR011701 Major facilitator superfamily AMED_5083 IPR020846 Major facilitator superfamily domain AMED_5083 IPR036259 MFS transporter superfamily AMED_5083 IPR004638 Drug resistance transporter EmrB-like AMED_5084 IPR036390 Winged helix DNA-binding domain superfamily AMED_5084 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5084 IPR000835 MarR-type HTH domain AMED_5085 IPR000425 Major intrinsic protein AMED_5085 IPR023743 Aquaporin Z AMED_5085 IPR034294 Aquaporin transporter AMED_5085 IPR023271 Aquaporin-like AMED_5085 IPR022357 Major intrinsic protein, conserved site AMED_5087 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_5087 IPR029061 Thiamin diphosphate-binding fold AMED_5087 IPR000399 TPP-binding enzyme, conserved site AMED_5087 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_5087 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_5087 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_5088 IPR002925 Dienelactone hydrolase AMED_5088 IPR029058 Alpha/Beta hydrolase fold AMED_5088 IPR002471 Peptidase S9, serine active site AMED_5089 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5089 IPR036291 NAD(P)-binding domain superfamily AMED_5089 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5089 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5090 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMED_5090 IPR011234 Fumarylacetoacetase-like, C-terminal AMED_5092 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5092 IPR002938 FAD-binding domain AMED_5094 IPR005119 LysR, substrate-binding AMED_5094 IPR037416 Nodulation protein D, PBP2 AMED_5094 IPR036390 Winged helix DNA-binding domain superfamily AMED_5094 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5094 IPR000847 Transcription regulator HTH, LysR AMED_5096 IPR015861 ABC transporter, ribose import, RbsA AMED_5096 IPR003439 ABC transporter-like AMED_5096 IPR003593 AAA+ ATPase domain AMED_5096 IPR017871 ABC transporter, conserved site AMED_5096 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5097 IPR001851 ABC transporter, permease AMED_5099 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_5099 IPR039425 RNA polymerase sigma-70 like AMED_5099 IPR013325 RNA polymerase sigma factor, region 2 AMED_5099 IPR014286 RNA polymerase sigma-70 RpoE type AMED_5099 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_5099 IPR007627 RNA polymerase sigma-70 region 2 AMED_5099 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5099 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_5099 IPR014284 RNA polymerase sigma-70 like domain AMED_5101 IPR038366 Zinc finger, ClpX C4-type superfamily AMED_5101 IPR010603 Zinc finger, ClpX C4-type AMED_5101 IPR003959 ATPase, AAA-type, core AMED_5101 IPR019489 Clp ATPase, C-terminal AMED_5101 IPR004487 Clp protease, ATP-binding subunit ClpX AMED_5101 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5101 IPR003593 AAA+ ATPase domain AMED_5105 IPR017853 Glycoside hydrolase superfamily AMED_5105 IPR008270 Glycoside hydrolase, family 25, active site AMED_5105 IPR002053 Glycoside hydrolase, family 25 AMED_5105 IPR018077 Glycoside hydrolase, family 25 subgroup AMED_5106 IPR004559 Heme chaperone HemW-like AMED_5106 IPR007197 Radical SAM AMED_5106 IPR023404 Radical SAM, alpha/beta horseshoe AMED_5106 IPR010723 HemN, C-terminal AMED_5106 IPR034505 Anaerobic coproporphyrinogen-III oxidase AMED_5106 IPR006638 Elp3/MiaB/NifB AMED_5107 IPR029044 Nucleotide-diphospho-sugar transferases AMED_5107 IPR001173 Glycosyltransferase 2-like AMED_5107 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AMED_5109 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5109 IPR008928 Six-hairpin glycosidase superfamily AMED_5109 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMED_5109 IPR016007 Alpha-L-rhamnosidase AMED_5109 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMED_5109 IPR013783 Immunoglobulin-like fold AMED_5109 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMED_5109 IPR008979 Galactose-binding-like domain superfamily AMED_5109 IPR036116 Fibronectin type III superfamily AMED_5109 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMED_5114 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5114 IPR036291 NAD(P)-binding domain superfamily AMED_5114 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5116 IPR000795 Transcription factor, GTP-binding domain AMED_5116 IPR009000 Translation protein, beta-barrel domain superfamily AMED_5116 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_5116 IPR015189 Translation elongation factor SelB, winged helix, type 1 AMED_5116 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMED_5116 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5116 IPR015191 Translation elongation factor SelB, winged helix, type 3 AMED_5116 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5116 IPR004535 Translation elongation factor, selenocysteine-specific AMED_5116 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMED_5116 IPR009000 Translation protein, beta-barrel domain superfamily AMED_5116 IPR000795 Transcription factor, GTP-binding domain AMED_5116 IPR015190 Translation elongation factor SelB, winged helix, type 2 AMED_5116 IPR005225 Small GTP-binding protein domain AMED_5116 IPR004535 Translation elongation factor, selenocysteine-specific AMED_5116 IPR036390 Winged helix DNA-binding domain superfamily AMED_5116 IPR005225 Small GTP-binding protein domain AMED_5116 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5116 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_5116 IPR015189 Translation elongation factor SelB, winged helix, type 1 AMED_5116 IPR015190 Translation elongation factor SelB, winged helix, type 2 AMED_5116 IPR036390 Winged helix DNA-binding domain superfamily AMED_5116 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5116 IPR015191 Translation elongation factor SelB, winged helix, type 3 AMED_5117 IPR015424 Pyridoxal phosphate-dependent transferase AMED_5117 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_5117 IPR018319 L-seryl-tRNA selenium transferase-like AMED_5117 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain AMED_5117 IPR004534 L-seryl-tRNA(Sec) selenium transferase AMED_5118 IPR010918 PurM-like, C-terminal domain AMED_5118 IPR023061 Selenophosphate synthetase, class I AMED_5118 IPR036921 PurM-like, N-terminal domain superfamily AMED_5118 IPR016188 PurM-like, N-terminal domain AMED_5118 IPR004536 Selenophosphate synthetase AMED_5118 IPR036676 PurM-like, C-terminal domain superfamily AMED_5122 IPR012338 Beta-lactamase/transpeptidase-like AMED_5123 IPR000847 Transcription regulator HTH, LysR AMED_5123 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5123 IPR036390 Winged helix DNA-binding domain superfamily AMED_5124 IPR012338 Beta-lactamase/transpeptidase-like AMED_5124 IPR000871 Beta-lactamase, class-A AMED_5124 IPR023650 Beta-lactamase, class-A active site AMED_5125 IPR029039 Flavoprotein-like superfamily AMED_5125 IPR003680 Flavodoxin-like fold AMED_5128 IPR000073 Alpha/beta hydrolase fold-1 AMED_5128 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AMED_5128 IPR029058 Alpha/Beta hydrolase fold AMED_5128 IPR000639 Epoxide hydrolase-like AMED_5129 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5129 IPR002938 FAD-binding domain AMED_5135 IPR029058 Alpha/Beta hydrolase fold AMED_5135 IPR000073 Alpha/beta hydrolase fold-1 AMED_5135 IPR000639 Epoxide hydrolase-like AMED_5135 IPR023594 Haloalkane dehalogenase, subfamily 2 AMED_5136 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_5136 IPR009057 Homeobox-like domain superfamily AMED_5136 IPR001647 DNA-binding HTH domain, TetR-type AMED_5138 IPR035070 Streptogrisin prodomain AMED_5138 IPR009003 Peptidase S1, PA clan AMED_5138 IPR003610 Carbohydrate-binding module family 5/12 AMED_5138 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_5138 IPR004236 Peptidase S1A, alpha-lytic prodomain AMED_5138 IPR033116 Serine proteases, trypsin family, serine active site AMED_5138 IPR001316 Peptidase S1A, streptogrisin AMED_5138 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_5146 IPR000731 Sterol-sensing domain AMED_5146 IPR004869 Membrane transport protein MMPL domain AMED_5151 IPR016067 S-adenosylmethionine decarboxylase, core AMED_5151 IPR017716 S-adenosylmethionine decarboxylase proenzyme AMED_5151 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic AMED_5152 IPR029066 PLP-binding barrel AMED_5152 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_5152 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_5152 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMED_5152 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_5152 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMED_5152 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_5152 IPR002986 Diaminopimelate decarboxylase, LysA AMED_5161 IPR001789 Signal transduction response regulator, receiver domain AMED_5161 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMED_5161 IPR011006 CheY-like superfamily AMED_5161 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AMED_5161 IPR035909 Methylesterase CheB, C-terminal AMED_5162 IPR003660 HAMP domain AMED_5162 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5162 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5162 IPR005467 Histidine kinase domain AMED_5162 IPR017202 Sensor histidine kinase LiaS/VraS AMED_5162 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5164 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5164 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5164 IPR011006 CheY-like superfamily AMED_5164 IPR001789 Signal transduction response regulator, receiver domain AMED_5164 IPR000792 Transcription regulator LuxR, C-terminal AMED_5167 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMED_5167 IPR004323 Divalent ion tolerance protein, CutA AMED_5167 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMED_5168 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMED_5168 IPR013126 Heat shock protein 70 family AMED_5168 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMED_5168 IPR012725 Chaperone DnaK AMED_5168 IPR018181 Heat shock protein 70, conserved site AMED_5170 IPR022812 Dynamin superfamily AMED_5170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5171 IPR022812 Dynamin superfamily AMED_5171 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5175 IPR002938 FAD-binding domain AMED_5175 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5176 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AMED_5176 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMED_5176 IPR006158 Cobalamin (vitamin B12)-binding domain AMED_5176 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AMED_5176 IPR011005 Dihydropteroate synthase-like AMED_5176 IPR036724 Cobalamin-binding domain superfamily AMED_5176 IPR036589 Homocysteine-binding domain superfamily AMED_5176 IPR033706 Methionine synthase, B12-binding domain AMED_5176 IPR011822 Cobalamin-dependent methionine synthase AMED_5176 IPR036594 Methionine synthase domain AMED_5176 IPR000489 Pterin-binding domain AMED_5176 IPR003726 Homocysteine-binding domain AMED_5177 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_5177 IPR011251 Luciferase-like domain AMED_5177 IPR036661 Luciferase-like domain superfamily AMED_5178 IPR003663 Sugar/inositol transporter AMED_5178 IPR036259 MFS transporter superfamily AMED_5178 IPR005828 Major facilitator, sugar transporter-like AMED_5178 IPR020846 Major facilitator superfamily domain AMED_5178 IPR005829 Sugar transporter, conserved site AMED_5179 IPR005102 Carbohydrate binding X2 domain AMED_5179 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5179 IPR001956 Carbohydrate-binding module 3 AMED_5179 IPR036966 Carbohydrate-binding module 3 superfamily AMED_5179 IPR013783 Immunoglobulin-like fold AMED_5179 IPR014756 Immunoglobulin E-set AMED_5179 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMED_5180 IPR020843 Polyketide synthase, enoylreductase domain AMED_5180 IPR036291 NAD(P)-binding domain superfamily AMED_5180 IPR011032 GroES-like superfamily AMED_5180 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_5180 IPR013154 Alcohol dehydrogenase, N-terminal AMED_5180 IPR013149 Alcohol dehydrogenase, C-terminal AMED_5185 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5185 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_5185 IPR001919 Carbohydrate-binding type-2 domain AMED_5185 IPR017853 Glycoside hydrolase superfamily AMED_5185 IPR001547 Glycoside hydrolase, family 5 AMED_5185 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5186 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_5186 IPR023210 NADP-dependent oxidoreductase domain AMED_5187 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5187 IPR008928 Six-hairpin glycosidase superfamily AMED_5187 IPR034116 AGE domain AMED_5187 IPR030875 Sulfoquinovose isomerase AMED_5188 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5188 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5188 IPR004302 Cellulose/chitin-binding protein, N-terminal AMED_5188 IPR014756 Immunoglobulin E-set AMED_5188 IPR001919 Carbohydrate-binding type-2 domain AMED_5189 IPR000843 LacI-type HTH domain AMED_5189 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5189 IPR028082 Periplasmic binding protein-like I AMED_5191 IPR013783 Immunoglobulin-like fold AMED_5191 IPR036116 Fibronectin type III superfamily AMED_5191 IPR036434 1, 4-beta cellobiohydrolase superfamily AMED_5191 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5191 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5191 IPR016288 1, 4-beta cellobiohydrolase AMED_5191 IPR001524 Glycoside hydrolase, family 6, conserved site AMED_5191 IPR001919 Carbohydrate-binding type-2 domain AMED_5191 IPR003961 Fibronectin type III AMED_5191 IPR018366 Carbohydrate-binding type-2, conserved site AMED_5192 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5192 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5192 IPR017853 Glycoside hydrolase superfamily AMED_5192 IPR001919 Carbohydrate-binding type-2 domain AMED_5192 IPR001547 Glycoside hydrolase, family 5 AMED_5192 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_5193 IPR003961 Fibronectin type III AMED_5193 IPR018366 Carbohydrate-binding type-2, conserved site AMED_5193 IPR001919 Carbohydrate-binding type-2 domain AMED_5193 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5193 IPR036116 Fibronectin type III superfamily AMED_5193 IPR008928 Six-hairpin glycosidase superfamily AMED_5193 IPR023309 Endoglucanase F, domain 2 AMED_5193 IPR013783 Immunoglobulin-like fold AMED_5193 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5193 IPR027390 Endoglucanase F, domain 3 AMED_5193 IPR000556 Glycoside hydrolase, 48F AMED_5193 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5194 IPR028082 Periplasmic binding protein-like I AMED_5194 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5194 IPR000843 LacI-type HTH domain AMED_5196 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5196 IPR035906 MetI-like superfamily AMED_5197 IPR035906 MetI-like superfamily AMED_5197 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5198 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMED_5198 IPR017853 Glycoside hydrolase superfamily AMED_5198 IPR018120 Glycoside hydrolase family 1, active site AMED_5198 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase AMED_5198 IPR001360 Glycoside hydrolase family 1 AMED_5199 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMED_5199 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMED_5199 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMED_5199 IPR037237 IlvD/EDD, N-terminal domain AMED_5201 IPR000644 CBS domain AMED_5202 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMED_5202 IPR005122 Uracil-DNA glycosylase-like AMED_5202 IPR005273 Uracil-DNA glycosylase family 4 AMED_5203 IPR033649 LigD polymerase domain, MtLigD-type AMED_5203 IPR012340 Nucleic acid-binding, OB-fold AMED_5203 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_5203 IPR014146 DNA ligase D, ligase domain AMED_5203 IPR012310 DNA ligase, ATP-dependent, central AMED_5203 IPR014145 DNA ligase D, polymerase domain AMED_5203 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_5204 IPR012340 Nucleic acid-binding, OB-fold AMED_5204 IPR033649 LigD polymerase domain, MtLigD-type AMED_5204 IPR014145 DNA ligase D, polymerase domain AMED_5204 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_5204 IPR014146 DNA ligase D, ligase domain AMED_5204 IPR012310 DNA ligase, ATP-dependent, central AMED_5204 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_5205 IPR006164 Ku70/Ku80 beta-barrel domain AMED_5205 IPR016194 SPOC-like, C-terminal domain superfamily AMED_5205 IPR011112 Rho termination factor, N-terminal AMED_5205 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMED_5210 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_5210 IPR036661 Luciferase-like domain superfamily AMED_5210 IPR011251 Luciferase-like domain AMED_5212 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5212 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5212 IPR010193 Serine-protein kinase RsbW AMED_5213 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_5213 IPR014284 RNA polymerase sigma-70 like domain AMED_5213 IPR014322 RNA polymerase sigma-B/F/G type AMED_5213 IPR000943 RNA polymerase sigma-70 AMED_5213 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5213 IPR007627 RNA polymerase sigma-70 region 2 AMED_5213 IPR013325 RNA polymerase sigma factor, region 2 AMED_5213 IPR007624 RNA polymerase sigma-70 region 3 AMED_5213 IPR007630 RNA polymerase sigma-70 region 4 AMED_5214 IPR007899 CHAD domain AMED_5214 IPR038186 CHAD domain superfamily AMED_5214 IPR033469 CYTH-like domain superfamily AMED_5214 IPR023577 CYTH domain AMED_5218 IPR023393 START-like domain superfamily AMED_5218 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMED_5225 IPR005119 LysR, substrate-binding AMED_5225 IPR000847 Transcription regulator HTH, LysR AMED_5225 IPR036390 Winged helix DNA-binding domain superfamily AMED_5225 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5226 IPR029066 PLP-binding barrel AMED_5226 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_5226 IPR002986 Diaminopimelate decarboxylase, LysA AMED_5226 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMED_5226 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_5226 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_5226 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_5231 IPR004736 MFS transporter, metabolite:H symporter AMED_5231 IPR011701 Major facilitator superfamily AMED_5231 IPR005829 Sugar transporter, conserved site AMED_5231 IPR036259 MFS transporter superfamily AMED_5231 IPR020846 Major facilitator superfamily domain AMED_5231 IPR005828 Major facilitator, sugar transporter-like AMED_5232 IPR000182 GNAT domain AMED_5232 IPR016181 Acyl-CoA N-acyltransferase AMED_5232 IPR006464 N-acetyltransferase RimI/Ard1 AMED_5234 IPR006530 YD repeat AMED_5234 IPR008727 PAAR motif AMED_5234 IPR031325 RHS repeat AMED_5234 IPR022385 Rhs repeat-associated core AMED_5244 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_5244 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_5244 IPR016166 FAD-binding domain, PCMH-type AMED_5244 IPR036318 FAD-binding, type PCMH-like superfamily AMED_5244 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_5244 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_5244 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_5245 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_5245 IPR036884 [2Fe-2S]-binding domain superfamily AMED_5245 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_5245 IPR002888 [2Fe-2S]-binding AMED_5245 IPR012675 Beta-grasp domain superfamily AMED_5246 IPR012780 Carbon-monoxide dehydrogenase, large subunit AMED_5246 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily AMED_5246 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding AMED_5246 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMED_5246 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMED_5250 IPR000843 LacI-type HTH domain AMED_5250 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5250 IPR028082 Periplasmic binding protein-like I AMED_5251 IPR017853 Glycoside hydrolase superfamily AMED_5251 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_5251 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_5251 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_5251 IPR019800 Glycoside hydrolase, family 3, active site AMED_5251 IPR026891 Fibronectin type III-like domain AMED_5251 IPR013783 Immunoglobulin-like fold AMED_5251 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_5252 IPR000757 Glycoside hydrolase family 16 AMED_5252 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_5252 IPR008263 Glycoside hydrolase, family 16, active site AMED_5253 IPR012334 Pectin lyase fold AMED_5254 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_5254 IPR001018 Beta-lactamase, class-B, conserved site AMED_5254 IPR001279 Metallo-beta-lactamase AMED_5256 IPR032677 GTP cyclohydrolase II AMED_5256 IPR000926 GTP cyclohydrolase II, RibA AMED_5256 IPR036144 RibA-like superfamily AMED_5259 IPR022880 DNA polymerase IV AMED_5259 IPR001126 UmuC domain AMED_5259 IPR017961 DNA polymerase, Y-family, little finger domain AMED_5259 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMED_5262 IPR006464 N-acetyltransferase RimI/Ard1 AMED_5262 IPR000182 GNAT domain AMED_5262 IPR016181 Acyl-CoA N-acyltransferase AMED_5263 IPR036291 NAD(P)-binding domain superfamily AMED_5263 IPR042172 Adenosylhomocysteinase-like superfamily AMED_5263 IPR000043 Adenosylhomocysteinase-like AMED_5263 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMED_5263 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AMED_5266 IPR016194 SPOC-like, C-terminal domain superfamily AMED_5266 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMED_5266 IPR006164 Ku70/Ku80 beta-barrel domain AMED_5270 IPR004942 Roadblock/LAMTOR2 domain AMED_5271 IPR009050 Globin-like superfamily AMED_5271 IPR012292 Globin/Protoglobin AMED_5271 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5271 IPR039379 Protoglobin, globin sensor domain AMED_5271 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_5271 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_5271 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5271 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5271 IPR005467 Histidine kinase domain AMED_5273 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5273 IPR039421 Type I protein exporter AMED_5273 IPR003593 AAA+ ATPase domain AMED_5273 IPR011527 ABC transporter type 1, transmembrane domain AMED_5273 IPR003439 ABC transporter-like AMED_5273 IPR017871 ABC transporter, conserved site AMED_5273 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5274 IPR003439 ABC transporter-like AMED_5274 IPR017871 ABC transporter, conserved site AMED_5274 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5274 IPR039421 Type I protein exporter AMED_5274 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5274 IPR011527 ABC transporter type 1, transmembrane domain AMED_5274 IPR003593 AAA+ ATPase domain AMED_5275 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_5275 IPR014145 DNA ligase D, polymerase domain AMED_5275 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_5275 IPR033649 LigD polymerase domain, MtLigD-type AMED_5275 IPR012340 Nucleic acid-binding, OB-fold AMED_5275 IPR014146 DNA ligase D, ligase domain AMED_5275 IPR012310 DNA ligase, ATP-dependent, central AMED_5278 IPR005158 Bacterial transcriptional activator domain AMED_5278 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5278 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5278 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5278 IPR019734 Tetratricopeptide repeat AMED_5278 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5278 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5278 IPR013026 Tetratricopeptide repeat-containing domain AMED_5278 IPR002182 NB-ARC AMED_5279 IPR029062 Class I glutamine amidotransferase-like AMED_5279 IPR002818 DJ-1/PfpI AMED_5280 IPR002818 DJ-1/PfpI AMED_5280 IPR029062 Class I glutamine amidotransferase-like AMED_5283 IPR001279 Metallo-beta-lactamase AMED_5283 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_5287 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_5287 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_5287 IPR029045 ClpP/crotonase-like domain superfamily AMED_5287 IPR036291 NAD(P)-binding domain superfamily AMED_5287 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_5287 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_5287 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_5287 IPR001753 Enoyl-CoA hydratase/isomerase AMED_5287 IPR012799 Fatty oxidation complex, alpha subunit FadB AMED_5288 IPR000073 Alpha/beta hydrolase fold-1 AMED_5288 IPR029058 Alpha/Beta hydrolase fold AMED_5288 IPR000639 Epoxide hydrolase-like AMED_5293 IPR032466 Metal-dependent hydrolase AMED_5293 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_5293 IPR023512 Deaminase MtaD/DadD AMED_5293 IPR006680 Amidohydrolase-related AMED_5294 IPR003607 HD/PDEase domain AMED_5294 IPR004811 RelA/SpoT family AMED_5294 IPR012675 Beta-grasp domain superfamily AMED_5294 IPR004095 TGS AMED_5294 IPR012676 TGS-like AMED_5294 IPR033655 RelA, TGS domain AMED_5294 IPR007685 RelA/SpoT AMED_5294 IPR002912 ACT domain AMED_5295 IPR000836 Phosphoribosyltransferase domain AMED_5295 IPR029057 Phosphoribosyltransferase-like AMED_5295 IPR005764 Adenine phosphoribosyl transferase AMED_5296 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMED_5296 IPR005665 Protein-export membrane protein SecF, bacterial AMED_5296 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMED_5296 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMED_5297 IPR005791 Protein translocase subunit SecD AMED_5297 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMED_5297 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMED_5297 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMED_5298 IPR003849 Preprotein translocase YajC AMED_5299 IPR036390 Winged helix DNA-binding domain superfamily AMED_5299 IPR004605 DNA helicase, Holliday junction RuvB-type AMED_5299 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5299 IPR008824 RuvB-like P-loop domain AMED_5299 IPR008823 RuvB C-terminal winged helix domain AMED_5299 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5299 IPR003593 AAA+ ATPase domain AMED_5299 IPR041445 RuvB, AAA lid domain AMED_5300 IPR012340 Nucleic acid-binding, OB-fold AMED_5300 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMED_5300 IPR000085 Bacterial DNA recombination protein RuvA AMED_5300 IPR010994 RuvA domain 2-like AMED_5300 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AMED_5300 IPR036267 RuvA, C-terminal domain superfamily AMED_5300 IPR011114 Holliday junction DNA helicase RuvA, C-terminal AMED_5301 IPR036397 Ribonuclease H superfamily AMED_5301 IPR002176 Crossover junction endodeoxyribonuclease RuvC AMED_5301 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AMED_5301 IPR012337 Ribonuclease H-like superfamily AMED_5304 IPR017856 Integrase-like, N-terminal AMED_5304 IPR002876 Transcriptional regulator TACO1-like AMED_5304 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMED_5304 IPR029072 YebC-like AMED_5305 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO AMED_5305 IPR029062 Class I glutamine amidotransferase-like AMED_5305 IPR021196 PdxT/SNO family, conserved site AMED_5308 IPR001387 Cro/C1-type helix-turn-helix domain AMED_5308 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5308 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain AMED_5308 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily AMED_5309 IPR039651 Protein FixC-like AMED_5309 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5309 IPR002938 FAD-binding domain AMED_5310 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_5310 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_5310 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_5310 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_5310 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_5310 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_5310 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_5311 IPR010071 Amino acid adenylation domain AMED_5311 IPR036736 ACP-like superfamily AMED_5311 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5311 IPR020845 AMP-binding, conserved site AMED_5311 IPR001242 Condensation domain AMED_5311 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_5311 IPR010060 Non-ribosomal peptide synthase AMED_5311 IPR042099 AMP-dependent synthetase-like superfamily AMED_5311 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_5311 IPR006162 Phosphopantetheine attachment site AMED_5311 IPR009081 Phosphopantetheine binding ACP domain AMED_5311 IPR000873 AMP-dependent synthetase/ligase AMED_5314 IPR013785 Aldolase-type TIM barrel AMED_5314 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ AMED_5314 IPR033755 PdxS/SNZ N-terminal domain AMED_5314 IPR011060 Ribulose-phosphate binding barrel AMED_5316 IPR012951 Berberine/berberine-like AMED_5316 IPR036318 FAD-binding, type PCMH-like superfamily AMED_5316 IPR016166 FAD-binding domain, PCMH-type AMED_5316 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_5316 IPR006094 FAD linked oxidase, N-terminal AMED_5317 IPR000640 Elongation factor EFG, domain V-like AMED_5317 IPR009000 Translation protein, beta-barrel domain superfamily AMED_5317 IPR005517 Translation elongation factor EFG/EF2, domain IV AMED_5317 IPR005225 Small GTP-binding protein domain AMED_5317 IPR035647 EF-G domain III/V-like AMED_5317 IPR009022 Elongation factor G, domain III AMED_5317 IPR035649 EFG, domain V AMED_5317 IPR041095 Elongation Factor G, domain II AMED_5317 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5317 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_5317 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_5317 IPR000795 Transcription factor, GTP-binding domain AMED_5317 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_5318 IPR027051 XdhC Rossmann domain AMED_5318 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family AMED_5318 IPR003777 XdhC- CoxI AMED_5322 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_5323 IPR004960 Bacterial lipid A biosynthesis acyltransferase AMED_5324 IPR000462 CDP-alcohol phosphatidyltransferase AMED_5326 IPR001310 Histidine triad (HIT) protein AMED_5326 IPR011146 HIT-like domain AMED_5326 IPR036265 HIT-like superfamily AMED_5326 IPR039383 FHIT family AMED_5327 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_5327 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMED_5327 IPR033728 Threonine-tRNA ligase catalytic core domain AMED_5327 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMED_5327 IPR036621 Anticodon-binding domain superfamily AMED_5327 IPR002320 Threonine-tRNA ligase, class IIa AMED_5327 IPR004154 Anticodon-binding AMED_5327 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMED_5327 IPR004095 TGS AMED_5328 IPR000415 Nitroreductase-like AMED_5328 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE AMED_5328 IPR029479 Nitroreductase AMED_5329 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMED_5329 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP AMED_5329 IPR003362 Bacterial sugar transferase AMED_5330 IPR038658 Sporulation-specific cell division protein SsgB superfamily AMED_5330 IPR006776 Sporulation-specific cell division protein SsgB AMED_5332 IPR001478 PDZ domain AMED_5332 IPR011782 Peptidase S1C, Do AMED_5332 IPR001940 Peptidase S1C AMED_5332 IPR009003 Peptidase S1, PA clan AMED_5332 IPR036034 PDZ superfamily AMED_5333 IPR000642 Peptidase M41 AMED_5333 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5333 IPR037219 Peptidase M41-like AMED_5333 IPR011546 Peptidase M41, FtsH extracellular AMED_5333 IPR005936 Peptidase, FtsH AMED_5333 IPR003593 AAA+ ATPase domain AMED_5333 IPR003959 ATPase, AAA-type, core AMED_5333 IPR041569 AAA ATPase, AAA+ lid domain AMED_5333 IPR003960 ATPase, AAA-type, conserved site AMED_5334 IPR005524 Predicted permease DUF318 AMED_5338 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5338 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5338 IPR011283 Acetoacetyl-CoA reductase AMED_5338 IPR036291 NAD(P)-binding domain superfamily AMED_5339 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_5339 IPR001753 Enoyl-CoA hydratase/isomerase AMED_5339 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_5339 IPR029045 ClpP/crotonase-like domain superfamily AMED_5340 IPR042099 AMP-dependent synthetase-like superfamily AMED_5340 IPR000873 AMP-dependent synthetase/ligase AMED_5340 IPR020845 AMP-binding, conserved site AMED_5340 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5341 IPR008979 Galactose-binding-like domain superfamily AMED_5341 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_5341 IPR005674 CocE/Serine esterase AMED_5341 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_5341 IPR029058 Alpha/Beta hydrolase fold AMED_5343 IPR011650 Peptidase M20, dimerisation domain AMED_5343 IPR002933 Peptidase M20 AMED_5343 IPR036264 Bacterial exopeptidase dimerisation domain AMED_5343 IPR017439 Amidohydrolase AMED_5346 IPR032466 Metal-dependent hydrolase AMED_5346 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_5346 IPR006680 Amidohydrolase-related AMED_5346 IPR026912 Adenine deaminase C-terminal domain AMED_5346 IPR006679 Adenine deaminase AMED_5349 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_5349 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_5349 IPR027424 Glucose Oxidase, domain 2 AMED_5349 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5349 IPR012132 Glucose-methanol-choline oxidoreductase AMED_5351 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase AMED_5351 IPR002938 FAD-binding domain AMED_5351 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5353 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5353 IPR000873 AMP-dependent synthetase/ligase AMED_5353 IPR042099 AMP-dependent synthetase-like superfamily AMED_5353 IPR020845 AMP-binding, conserved site AMED_5358 IPR009057 Homeobox-like domain superfamily AMED_5358 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_5358 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_5358 IPR001647 DNA-binding HTH domain, TetR-type AMED_5360 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMED_5360 IPR001206 Diacylglycerol kinase, catalytic domain AMED_5360 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMED_5366 IPR002912 ACT domain AMED_5366 IPR029009 Allosteric substrate binding domain superfamily AMED_5366 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_5366 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_5366 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_5366 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_5366 IPR036291 NAD(P)-binding domain superfamily AMED_5366 IPR006236 D-3-phosphoglycerate dehydrogenase AMED_5367 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5367 IPR035906 MetI-like superfamily AMED_5368 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5368 IPR035906 MetI-like superfamily AMED_5370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5370 IPR028082 Periplasmic binding protein-like I AMED_5370 IPR000843 LacI-type HTH domain AMED_5371 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5371 IPR023753 FAD/NAD(P)-binding domain AMED_5373 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_5373 IPR036259 MFS transporter superfamily AMED_5373 IPR005829 Sugar transporter, conserved site AMED_5373 IPR020846 Major facilitator superfamily domain AMED_5373 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5373 IPR036390 Winged helix DNA-binding domain superfamily AMED_5373 IPR011701 Major facilitator superfamily AMED_5374 IPR036291 NAD(P)-binding domain superfamily AMED_5374 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5374 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5376 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_5376 IPR001647 DNA-binding HTH domain, TetR-type AMED_5376 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_5376 IPR013572 Transcription regulator MAATS, C-terminal AMED_5376 IPR009057 Homeobox-like domain superfamily AMED_5383 IPR039672 Lactose permease-like AMED_5383 IPR036259 MFS transporter superfamily AMED_5383 IPR018043 Sodium:galactoside symporter, conserved site AMED_5384 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_5384 IPR000524 Transcription regulator HTH, GntR AMED_5384 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5384 IPR011711 GntR, C-terminal AMED_5384 IPR000485 AsnC-type HTH domain AMED_5384 IPR036390 Winged helix DNA-binding domain superfamily AMED_5388 IPR016181 Acyl-CoA N-acyltransferase AMED_5388 IPR024170 Aminoglycoside N6-acetyltransferase AMED_5388 IPR000182 GNAT domain AMED_5392 IPR027424 Glucose Oxidase, domain 2 AMED_5392 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_5392 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_5392 IPR012132 Glucose-methanol-choline oxidoreductase AMED_5392 IPR011533 Oxygen-dependent choline dehydrogenase AMED_5392 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5393 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AMED_5393 IPR005835 Nucleotidyl transferase domain AMED_5393 IPR029044 Nucleotide-diphospho-sugar transferases AMED_5394 IPR006162 Phosphopantetheine attachment site AMED_5394 IPR009081 Phosphopantetheine binding ACP domain AMED_5394 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_5394 IPR015424 Pyridoxal phosphate-dependent transferase AMED_5394 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_5394 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_5394 IPR005814 Aminotransferase class-III AMED_5394 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_5394 IPR018201 Beta-ketoacyl synthase, active site AMED_5394 IPR001242 Condensation domain AMED_5394 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_5394 IPR042099 AMP-dependent synthetase-like superfamily AMED_5394 IPR000873 AMP-dependent synthetase/ligase AMED_5394 IPR020845 AMP-binding, conserved site AMED_5394 IPR010071 Amino acid adenylation domain AMED_5394 IPR036736 ACP-like superfamily AMED_5394 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5394 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_5394 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_5394 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_5394 IPR016039 Thiolase-like AMED_5398 IPR030953 Glycosyltransferase, activator-dependent family AMED_5398 IPR010610 Domain of unknown function DUF1205 AMED_5400 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like AMED_5400 IPR004981 Tryptophan 2,3-dioxygenase AMED_5402 IPR038153 NDP-hexose 2,3-dehydratase-like superfamily AMED_5402 IPR005212 NDP-hexose 2,3-dehydratase AMED_5403 IPR001789 Signal transduction response regulator, receiver domain AMED_5403 IPR011006 CheY-like superfamily AMED_5403 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5403 IPR000792 Transcription regulator LuxR, C-terminal AMED_5404 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5404 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5404 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5406 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5406 IPR003593 AAA+ ATPase domain AMED_5406 IPR003439 ABC transporter-like AMED_5406 IPR017871 ABC transporter, conserved site AMED_5406 IPR005978 Nodulation ABC transporter, NodI AMED_5406 IPR015851 ABC transporter, NodI AMED_5408 IPR040800 Methyltransferase MycE, N-terminal AMED_5408 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_5409 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5409 IPR001242 Condensation domain AMED_5409 IPR042099 AMP-dependent synthetase-like superfamily AMED_5409 IPR029058 Alpha/Beta hydrolase fold AMED_5409 IPR036736 ACP-like superfamily AMED_5409 IPR020845 AMP-binding, conserved site AMED_5409 IPR000873 AMP-dependent synthetase/ligase AMED_5409 IPR010071 Amino acid adenylation domain AMED_5409 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_5409 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_5409 IPR009081 Phosphopantetheine binding ACP domain AMED_5409 IPR020802 Polyketide synthase, thioesterase domain AMED_5409 IPR001031 Thioesterase AMED_5410 IPR030953 Glycosyltransferase, activator-dependent family AMED_5410 IPR010610 Domain of unknown function DUF1205 AMED_5411 IPR030953 Glycosyltransferase, activator-dependent family AMED_5411 IPR010610 Domain of unknown function DUF1205 AMED_5412 IPR010610 Domain of unknown function DUF1205 AMED_5412 IPR030953 Glycosyltransferase, activator-dependent family AMED_5413 IPR010610 Domain of unknown function DUF1205 AMED_5413 IPR030953 Glycosyltransferase, activator-dependent family AMED_5414 IPR010610 Domain of unknown function DUF1205 AMED_5414 IPR030953 Glycosyltransferase, activator-dependent family AMED_5416 IPR003439 ABC transporter-like AMED_5416 IPR003593 AAA+ ATPase domain AMED_5416 IPR017871 ABC transporter, conserved site AMED_5416 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_5416 IPR025302 Domain of unknown function DUF4162 AMED_5416 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5417 IPR010233 Ubiquinone biosynthesis O-methyltransferase AMED_5417 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_5418 IPR030953 Glycosyltransferase, activator-dependent family AMED_5418 IPR010610 Domain of unknown function DUF1205 AMED_5419 IPR010610 Domain of unknown function DUF1205 AMED_5419 IPR030953 Glycosyltransferase, activator-dependent family AMED_5420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_5420 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMED_5420 IPR015424 Pyridoxal phosphate-dependent transferase AMED_5420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_5421 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5421 IPR005158 Bacterial transcriptional activator domain AMED_5421 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5421 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5421 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5422 IPR010610 Domain of unknown function DUF1205 AMED_5422 IPR030953 Glycosyltransferase, activator-dependent family AMED_5423 IPR008279 PEP-utilising enzyme, mobile domain AMED_5423 IPR013815 ATP-grasp fold, subdomain 1 AMED_5423 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AMED_5423 IPR036637 Phosphohistidine domain superfamily AMED_5424 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMED_5424 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_5424 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_5424 IPR036291 NAD(P)-binding domain superfamily AMED_5424 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_5424 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_5424 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_5426 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5426 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5426 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5426 IPR036291 NAD(P)-binding domain superfamily AMED_5430 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5430 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5430 IPR036291 NAD(P)-binding domain superfamily AMED_5430 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5432 IPR023393 START-like domain superfamily AMED_5432 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMED_5433 IPR009081 Phosphopantetheine binding ACP domain AMED_5433 IPR036736 ACP-like superfamily AMED_5433 IPR006162 Phosphopantetheine attachment site AMED_5434 IPR016039 Thiolase-like AMED_5434 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_5434 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_5434 IPR000794 Beta-ketoacyl synthase AMED_5434 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_5435 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_5435 IPR000794 Beta-ketoacyl synthase AMED_5435 IPR018201 Beta-ketoacyl synthase, active site AMED_5435 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_5435 IPR016039 Thiolase-like AMED_5435 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_5436 IPR013096 Cupin 2, conserved barrel AMED_5436 IPR011051 RmlC-like cupin domain superfamily AMED_5436 IPR016672 Polyketide biosynthesis protein CurC, predicted AMED_5436 IPR014710 RmlC-like jelly roll fold AMED_5437 IPR038474 Polyketide synthesis cyclase superfamily AMED_5437 IPR006765 Polyketide synthesis cyclase AMED_5437 IPR011008 Dimeric alpha-beta barrel AMED_5439 IPR036259 MFS transporter superfamily AMED_5439 IPR000109 Proton-dependent oligopeptide transporter family AMED_5439 IPR020846 Major facilitator superfamily domain AMED_5439 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AMED_5439 IPR005279 Dipeptide/tripeptide permease AMED_5440 IPR001077 O-methyltransferase domain AMED_5440 IPR036390 Winged helix DNA-binding domain superfamily AMED_5440 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5440 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain AMED_5440 IPR016461 O-methyltransferase COMT-type AMED_5440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_5441 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5441 IPR002938 FAD-binding domain AMED_5442 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5442 IPR002938 FAD-binding domain AMED_5444 IPR036661 Luciferase-like domain superfamily AMED_5444 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_5444 IPR011251 Luciferase-like domain AMED_5445 IPR011283 Acetoacetyl-CoA reductase AMED_5445 IPR036291 NAD(P)-binding domain superfamily AMED_5445 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5445 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5446 IPR001128 Cytochrome P450 AMED_5446 IPR002397 Cytochrome P450, B-class AMED_5446 IPR017972 Cytochrome P450, conserved site AMED_5446 IPR036396 Cytochrome P450 superfamily AMED_5447 IPR000683 Oxidoreductase, N-terminal AMED_5447 IPR036291 NAD(P)-binding domain superfamily AMED_5449 IPR036291 NAD(P)-binding domain superfamily AMED_5449 IPR016040 NAD(P)-binding domain AMED_5450 IPR036291 NAD(P)-binding domain superfamily AMED_5450 IPR001509 NAD-dependent epimerase/dehydratase AMED_5453 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5453 IPR000792 Transcription regulator LuxR, C-terminal AMED_5453 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5453 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5453 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5454 IPR031325 RHS repeat AMED_5454 IPR001826 RHS protein AMED_5454 IPR006530 YD repeat AMED_5454 IPR022385 Rhs repeat-associated core AMED_5457 IPR000415 Nitroreductase-like AMED_5459 IPR001845 HTH ArsR-type DNA-binding domain AMED_5459 IPR036390 Winged helix DNA-binding domain superfamily AMED_5459 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5459 IPR011991 ArsR-like helix-turn-helix domain AMED_5460 IPR036513 STAS domain superfamily AMED_5460 IPR011547 SLC26A/SulP transporter domain AMED_5460 IPR002645 STAS domain AMED_5460 IPR001902 SLC26A/SulP transporter AMED_5462 IPR006015 Universal stress protein A family AMED_5462 IPR006016 UspA AMED_5464 IPR000415 Nitroreductase-like AMED_5466 IPR004014 Cation-transporting P-type ATPase, N-terminal AMED_5466 IPR006068 Cation-transporting P-type ATPase, C-terminal AMED_5466 IPR001757 P-type ATPase AMED_5466 IPR023214 HAD superfamily AMED_5466 IPR008250 P-type ATPase, A domain superfamily AMED_5466 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_5466 IPR018303 P-type ATPase, phosphorylation site AMED_5466 IPR023299 P-type ATPase, cytoplasmic domain N AMED_5466 IPR036412 HAD-like superfamily AMED_5469 IPR023865 Aliphatic acid kinase, short-chain, conserved site AMED_5469 IPR000890 Aliphatic acid kinase, short-chain AMED_5469 IPR004372 Acetate/propionate kinase AMED_5470 IPR011761 ATP-grasp fold AMED_5470 IPR003781 CoA-binding AMED_5470 IPR036291 NAD(P)-binding domain superfamily AMED_5470 IPR013815 ATP-grasp fold, subdomain 1 AMED_5470 IPR016102 Succinyl-CoA synthetase-like AMED_5470 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMED_5471 IPR029016 GAF-like domain superfamily AMED_5471 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5471 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5471 IPR003018 GAF domain AMED_5471 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5473 IPR000792 Transcription regulator LuxR, C-terminal AMED_5473 IPR001789 Signal transduction response regulator, receiver domain AMED_5473 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5473 IPR011006 CheY-like superfamily AMED_5474 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AMED_5475 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AMED_5476 IPR011527 ABC transporter type 1, transmembrane domain AMED_5476 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5476 IPR003439 ABC transporter-like AMED_5476 IPR017871 ABC transporter, conserved site AMED_5476 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AMED_5476 IPR003593 AAA+ ATPase domain AMED_5476 IPR039421 Type I protein exporter AMED_5476 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5477 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site AMED_5477 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal AMED_5477 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site AMED_5477 IPR023962 Probable phosphoketolase AMED_5477 IPR029061 Thiamin diphosphate-binding fold AMED_5477 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_5477 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase AMED_5477 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal AMED_5478 IPR006015 Universal stress protein A family AMED_5478 IPR006016 UspA AMED_5479 IPR000644 CBS domain AMED_5479 IPR038763 DHH phosphoesterase superfamily AMED_5479 IPR002646 Poly A polymerase, head domain AMED_5480 IPR006015 Universal stress protein A family AMED_5480 IPR006016 UspA AMED_5483 IPR006016 UspA AMED_5483 IPR006015 Universal stress protein A family AMED_5486 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_5486 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_5486 IPR011793 Putative glutamate--cysteine ligase YbdK AMED_5489 IPR012349 FMN-binding split barrel AMED_5489 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AMED_5491 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5491 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5492 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5492 IPR001789 Signal transduction response regulator, receiver domain AMED_5492 IPR000792 Transcription regulator LuxR, C-terminal AMED_5492 IPR011006 CheY-like superfamily AMED_5496 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5496 IPR005467 Histidine kinase domain AMED_5496 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5496 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5496 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5496 IPR017203 Signal transduction histidine kinase, NreB AMED_5497 IPR001789 Signal transduction response regulator, receiver domain AMED_5497 IPR000792 Transcription regulator LuxR, C-terminal AMED_5497 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5497 IPR011006 CheY-like superfamily AMED_5501 IPR004276 Glycosyltransferase family 28, N-terminal domain AMED_5502 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5502 IPR036390 Winged helix DNA-binding domain superfamily AMED_5502 IPR023187 Transcriptional regulator MarR-type, conserved site AMED_5502 IPR000835 MarR-type HTH domain AMED_5507 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5507 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5507 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5507 IPR017171 Signal transduction histidine kinase, MctS AMED_5507 IPR033480 Single Cache domain 2 AMED_5508 IPR000792 Transcription regulator LuxR, C-terminal AMED_5508 IPR001789 Signal transduction response regulator, receiver domain AMED_5508 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5508 IPR011006 CheY-like superfamily AMED_5515 IPR019533 Peptidase S26 AMED_5515 IPR019758 Peptidase S26A, signal peptidase I, conserved site AMED_5515 IPR000223 Peptidase S26A, signal peptidase I AMED_5515 IPR036286 LexA/Signal peptidase-like superfamily AMED_5515 IPR019756 Peptidase S26A, signal peptidase I, serine active site AMED_5516 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5516 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5516 IPR036291 NAD(P)-binding domain superfamily AMED_5517 IPR001207 Transposase, mutator type AMED_5524 IPR002397 Cytochrome P450, B-class AMED_5524 IPR001128 Cytochrome P450 AMED_5524 IPR036396 Cytochrome P450 superfamily AMED_5524 IPR017972 Cytochrome P450, conserved site AMED_5528 IPR011251 Luciferase-like domain AMED_5528 IPR036661 Luciferase-like domain superfamily AMED_5529 IPR000101 Gamma-glutamyltranspeptidase AMED_5529 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_5530 IPR000160 GGDEF domain AMED_5530 IPR029787 Nucleotide cyclase AMED_5530 IPR000014 PAS domain AMED_5530 IPR000700 PAS-associated, C-terminal AMED_5530 IPR013656 PAS fold-4 AMED_5530 IPR035965 PAS domain superfamily AMED_5534 IPR011701 Major facilitator superfamily AMED_5534 IPR020846 Major facilitator superfamily domain AMED_5534 IPR036259 MFS transporter superfamily AMED_5534 IPR005829 Sugar transporter, conserved site AMED_5536 IPR029066 PLP-binding barrel AMED_5536 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_5536 IPR002986 Diaminopimelate decarboxylase, LysA AMED_5536 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_5536 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_5536 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMED_5536 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_5539 IPR029044 Nucleotide-diphospho-sugar transferases AMED_5539 IPR001173 Glycosyltransferase 2-like AMED_5539 IPR027791 Galactosyltransferase, C-terminal AMED_5540 IPR029044 Nucleotide-diphospho-sugar transferases AMED_5540 IPR001173 Glycosyltransferase 2-like AMED_5541 IPR003593 AAA+ ATPase domain AMED_5541 IPR011527 ABC transporter type 1, transmembrane domain AMED_5541 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5541 IPR003439 ABC transporter-like AMED_5541 IPR017871 ABC transporter, conserved site AMED_5541 IPR011917 ABC transporter, lipid A export, MsbA AMED_5541 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5542 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5542 IPR011917 ABC transporter, lipid A export, MsbA AMED_5542 IPR017871 ABC transporter, conserved site AMED_5542 IPR003439 ABC transporter-like AMED_5542 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_5542 IPR011527 ABC transporter type 1, transmembrane domain AMED_5542 IPR003593 AAA+ ATPase domain AMED_5542 IPR039421 Type I protein exporter AMED_5545 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5546 IPR029058 Alpha/Beta hydrolase fold AMED_5546 IPR016292 Epoxide hydrolase AMED_5546 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_5546 IPR010497 Epoxide hydrolase, N-terminal AMED_5546 IPR000639 Epoxide hydrolase-like AMED_5547 IPR029058 Alpha/Beta hydrolase fold AMED_5547 IPR013094 Alpha/beta hydrolase fold-3 AMED_5557 IPR005829 Sugar transporter, conserved site AMED_5557 IPR020846 Major facilitator superfamily domain AMED_5557 IPR036259 MFS transporter superfamily AMED_5557 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AMED_5557 IPR011701 Major facilitator superfamily AMED_5559 IPR019734 Tetratricopeptide repeat AMED_5559 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5559 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5559 IPR005158 Bacterial transcriptional activator domain AMED_5559 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5559 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5559 IPR013026 Tetratricopeptide repeat-containing domain AMED_5559 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5559 IPR002182 NB-ARC AMED_5560 IPR025714 Methyltransferase domain AMED_5560 IPR026669 Arsenite methyltransferase-like AMED_5560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_5560 IPR005149 Transcription regulator PadR, N-terminal AMED_5560 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5560 IPR036390 Winged helix DNA-binding domain superfamily AMED_5565 IPR016289 Endo-beta-N-acetylglucosaminidase AMED_5565 IPR001579 Glycoside hydrolase, chitinase active site AMED_5565 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_5565 IPR017853 Glycoside hydrolase superfamily AMED_5568 IPR005025 NADPH-dependent FMN reductase-like AMED_5568 IPR029039 Flavoprotein-like superfamily AMED_5571 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5571 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_5571 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5571 IPR003018 GAF domain AMED_5571 IPR029016 GAF-like domain superfamily AMED_5573 IPR000792 Transcription regulator LuxR, C-terminal AMED_5573 IPR001789 Signal transduction response regulator, receiver domain AMED_5573 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5573 IPR011006 CheY-like superfamily AMED_5575 IPR001972 Stomatin family AMED_5575 IPR032435 Band 7, C-terminal extension AMED_5575 IPR018080 Band 7/stomatin-like, conserved site AMED_5575 IPR036013 Band 7/SPFH domain superfamily AMED_5575 IPR001107 Band 7 domain AMED_5578 IPR000836 Phosphoribosyltransferase domain AMED_5578 IPR007815 Erythromycin esterase AMED_5578 IPR029057 Phosphoribosyltransferase-like AMED_5588 IPR002549 Transmembrane protein TqsA-like AMED_5592 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMED_5592 IPR006336 Glutamate--cysteine ligase, GCS2 AMED_5592 IPR011793 Putative glutamate--cysteine ligase YbdK AMED_5601 IPR011006 CheY-like superfamily AMED_5601 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5601 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5601 IPR039420 Transcriptional regulatory protein WalR-like AMED_5601 IPR001789 Signal transduction response regulator, receiver domain AMED_5602 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5602 IPR003660 HAMP domain AMED_5602 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5602 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_5602 IPR005467 Histidine kinase domain AMED_5602 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_5602 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5604 IPR001296 Glycosyl transferase, family 1 AMED_5604 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_5604 IPR017814 Mycothiol biosynthesis protein, MshA AMED_5609 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5609 IPR036291 NAD(P)-binding domain superfamily AMED_5609 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5610 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_5610 IPR009057 Homeobox-like domain superfamily AMED_5610 IPR041347 MftR, C-terminal AMED_5610 IPR001647 DNA-binding HTH domain, TetR-type AMED_5611 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5611 IPR013325 RNA polymerase sigma factor, region 2 AMED_5611 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_5611 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_5611 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5611 IPR014284 RNA polymerase sigma-70 like domain AMED_5611 IPR007627 RNA polymerase sigma-70 region 2 AMED_5612 IPR007627 RNA polymerase sigma-70 region 2 AMED_5612 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_5612 IPR013325 RNA polymerase sigma factor, region 2 AMED_5612 IPR014284 RNA polymerase sigma-70 like domain AMED_5612 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5612 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_5612 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5616 IPR013783 Immunoglobulin-like fold AMED_5616 IPR017853 Glycoside hydrolase superfamily AMED_5616 IPR023230 Glycoside hydrolase, family 2, conserved site AMED_5616 IPR008979 Galactose-binding-like domain superfamily AMED_5616 IPR006101 Glycoside hydrolase, family 2 AMED_5616 IPR023232 Glycoside hydrolase, family 2, active site AMED_5616 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_5616 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_5616 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_5616 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_5617 IPR000847 Transcription regulator HTH, LysR AMED_5617 IPR005119 LysR, substrate-binding AMED_5617 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain AMED_5617 IPR036390 Winged helix DNA-binding domain superfamily AMED_5617 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5618 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5618 IPR036291 NAD(P)-binding domain superfamily AMED_5618 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5618 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5624 IPR011009 Protein kinase-like domain superfamily AMED_5624 IPR008271 Serine/threonine-protein kinase, active site AMED_5624 IPR000719 Protein kinase domain AMED_5625 IPR007627 RNA polymerase sigma-70 region 2 AMED_5625 IPR032710 NTF2-like domain superfamily AMED_5625 IPR014284 RNA polymerase sigma-70 like domain AMED_5625 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_5625 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_5625 IPR037401 SnoaL-like domain AMED_5625 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5625 IPR013325 RNA polymerase sigma factor, region 2 AMED_5626 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative AMED_5626 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_5626 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_5628 IPR017972 Cytochrome P450, conserved site AMED_5628 IPR002397 Cytochrome P450, B-class AMED_5628 IPR001128 Cytochrome P450 AMED_5628 IPR036396 Cytochrome P450 superfamily AMED_5630 IPR001128 Cytochrome P450 AMED_5630 IPR036396 Cytochrome P450 superfamily AMED_5630 IPR017972 Cytochrome P450, conserved site AMED_5630 IPR002397 Cytochrome P450, B-class AMED_5632 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5632 IPR002938 FAD-binding domain AMED_5635 IPR010497 Epoxide hydrolase, N-terminal AMED_5635 IPR016292 Epoxide hydrolase AMED_5635 IPR029058 Alpha/Beta hydrolase fold AMED_5635 IPR000639 Epoxide hydrolase-like AMED_5635 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_5636 IPR016292 Epoxide hydrolase AMED_5636 IPR029058 Alpha/Beta hydrolase fold AMED_5636 IPR000639 Epoxide hydrolase-like AMED_5636 IPR010497 Epoxide hydrolase, N-terminal AMED_5636 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_5638 IPR029057 Phosphoribosyltransferase-like AMED_5638 IPR023031 Orotate phosphoribosyltransferase AMED_5638 IPR000836 Phosphoribosyltransferase domain AMED_5638 IPR004467 Orotate phosphoribosyl transferase domain AMED_5640 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5640 IPR000792 Transcription regulator LuxR, C-terminal AMED_5640 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5640 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5640 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5641 IPR029787 Nucleotide cyclase AMED_5641 IPR041664 Orc1-like, AAA ATPase domain AMED_5641 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMED_5641 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5641 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5642 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5642 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5642 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5642 IPR036291 NAD(P)-binding domain superfamily AMED_5645 IPR006314 Dyp-type peroxidase AMED_5645 IPR011008 Dimeric alpha-beta barrel AMED_5647 IPR036291 NAD(P)-binding domain superfamily AMED_5647 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5647 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5648 IPR011701 Major facilitator superfamily AMED_5648 IPR020846 Major facilitator superfamily domain AMED_5648 IPR036259 MFS transporter superfamily AMED_5648 IPR004638 Drug resistance transporter EmrB-like AMED_5651 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5651 IPR000792 Transcription regulator LuxR, C-terminal AMED_5651 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5651 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5654 IPR017871 ABC transporter, conserved site AMED_5654 IPR015850 ABC transporter, phosphate import, PstB AMED_5654 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5654 IPR003439 ABC transporter-like AMED_5654 IPR005670 Phosphate transport system permease protein 1 AMED_5654 IPR003593 AAA+ ATPase domain AMED_5662 IPR024370 PBP domain AMED_5662 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS AMED_5663 IPR005672 Phosphate transport system permease protein PstA AMED_5663 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5663 IPR035906 MetI-like superfamily AMED_5664 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5664 IPR035906 MetI-like superfamily AMED_5664 IPR011864 Phosphate ABC transporter, permease protein PstC AMED_5666 IPR005467 Histidine kinase domain AMED_5666 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5666 IPR003660 HAMP domain AMED_5666 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5666 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_5666 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5666 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_5667 IPR001789 Signal transduction response regulator, receiver domain AMED_5667 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5667 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5667 IPR011006 CheY-like superfamily AMED_5667 IPR039420 Transcriptional regulatory protein WalR-like AMED_5668 IPR001173 Glycosyltransferase 2-like AMED_5668 IPR039528 DPM1-like AMED_5668 IPR029044 Nucleotide-diphospho-sugar transferases AMED_5669 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMED_5671 IPR011701 Major facilitator superfamily AMED_5671 IPR020846 Major facilitator superfamily domain AMED_5671 IPR036390 Winged helix DNA-binding domain superfamily AMED_5671 IPR005829 Sugar transporter, conserved site AMED_5671 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_5671 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5671 IPR036259 MFS transporter superfamily AMED_5672 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5672 IPR002938 FAD-binding domain AMED_5675 IPR023588 Transcription regulator HTH, PurR AMED_5675 IPR028082 Periplasmic binding protein-like I AMED_5675 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5675 IPR000843 LacI-type HTH domain AMED_5677 IPR009057 Homeobox-like domain superfamily AMED_5677 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_5677 IPR032551 HTH-type transcriptional repressor, C-terminal AMED_5677 IPR001647 DNA-binding HTH domain, TetR-type AMED_5682 IPR029058 Alpha/Beta hydrolase fold AMED_5682 IPR000073 Alpha/beta hydrolase fold-1 AMED_5688 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5688 IPR007627 RNA polymerase sigma-70 region 2 AMED_5688 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_5688 IPR014284 RNA polymerase sigma-70 like domain AMED_5688 IPR013325 RNA polymerase sigma factor, region 2 AMED_5688 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5688 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_5692 IPR000868 Isochorismatase-like AMED_5692 IPR036380 Isochorismatase-like superfamily AMED_5694 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AMED_5694 IPR000073 Alpha/beta hydrolase fold-1 AMED_5694 IPR029058 Alpha/Beta hydrolase fold AMED_5697 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5697 IPR002938 FAD-binding domain AMED_5698 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_5698 IPR001647 DNA-binding HTH domain, TetR-type AMED_5698 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_5698 IPR015292 Transcription regulator YbiH, C-terminal AMED_5698 IPR009057 Homeobox-like domain superfamily AMED_5701 IPR014103 Zeta-carotene desaturase AMED_5701 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5701 IPR002937 Amine oxidase AMED_5702 IPR029016 GAF-like domain superfamily AMED_5702 IPR036390 Winged helix DNA-binding domain superfamily AMED_5702 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5702 IPR005471 Transcription regulator IclR, N-terminal AMED_5702 IPR014757 Transcription regulator IclR, C-terminal AMED_5703 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5703 IPR036291 NAD(P)-binding domain superfamily AMED_5703 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5703 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5705 IPR029058 Alpha/Beta hydrolase fold AMED_5705 IPR000073 Alpha/beta hydrolase fold-1 AMED_5705 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD AMED_5705 IPR000639 Epoxide hydrolase-like AMED_5706 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMED_5706 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase AMED_5707 IPR012340 Nucleic acid-binding, OB-fold AMED_5707 IPR002059 Cold-shock protein, DNA-binding AMED_5707 IPR019844 Cold-shock (CSD) domain AMED_5707 IPR011129 Cold shock domain AMED_5707 IPR012156 Cold shock, CspA AMED_5708 IPR001647 DNA-binding HTH domain, TetR-type AMED_5708 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_5708 IPR013572 Transcription regulator MAATS, C-terminal AMED_5708 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_5708 IPR009057 Homeobox-like domain superfamily AMED_5710 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5710 IPR036291 NAD(P)-binding domain superfamily AMED_5712 IPR011008 Dimeric alpha-beta barrel AMED_5712 IPR005545 YCII-related AMED_5714 IPR004199 Beta galactosidase small chain/ domain 5 AMED_5714 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_5714 IPR011013 Galactose mutarotase-like domain superfamily AMED_5714 IPR008979 Galactose-binding-like domain superfamily AMED_5714 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_5714 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_5714 IPR023232 Glycoside hydrolase, family 2, active site AMED_5714 IPR006101 Glycoside hydrolase, family 2 AMED_5714 IPR032312 Beta-galactosidase, domain 4 AMED_5714 IPR017853 Glycoside hydrolase superfamily AMED_5714 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_5714 IPR013783 Immunoglobulin-like fold AMED_5714 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_5714 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase AMED_5714 IPR023230 Glycoside hydrolase, family 2, conserved site AMED_5715 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_5715 IPR038770 Sodium/solute symporter superfamily AMED_5715 IPR036318 FAD-binding, type PCMH-like superfamily AMED_5715 IPR030151 K(+)/H(+) antiporter NhaP AMED_5715 IPR023729 K(+)/H(+) antiporter NhaP2 AMED_5715 IPR006037 Regulator of K+ conductance, C-terminal AMED_5715 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMED_5715 IPR005170 Transporter-associated domain AMED_5715 IPR006153 Cation/H+ exchanger AMED_5716 IPR000883 Cytochrome c oxidase subunit I AMED_5716 IPR014241 Cytochrome c oxidase, subunit I bacterial type AMED_5716 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMED_5716 IPR023616 Cytochrome c oxidase-like, subunit I domain AMED_5716 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMED_5717 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_5717 IPR014349 Rieske iron-sulphur protein AMED_5717 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_5718 IPR016174 Di-haem cytochrome, transmembrane AMED_5718 IPR005797 Cytochrome b/b6, N-terminal AMED_5718 IPR027387 Cytochrome b/b6-like domain superfamily AMED_5719 IPR016174 Di-haem cytochrome, transmembrane AMED_5719 IPR005797 Cytochrome b/b6, N-terminal AMED_5719 IPR027387 Cytochrome b/b6-like domain superfamily AMED_5724 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5724 IPR002938 FAD-binding domain AMED_5726 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5726 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5726 IPR011006 CheY-like superfamily AMED_5726 IPR001789 Signal transduction response regulator, receiver domain AMED_5726 IPR039420 Transcriptional regulatory protein WalR-like AMED_5727 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5727 IPR005467 Histidine kinase domain AMED_5727 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_5727 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_5727 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5727 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5727 IPR003660 HAMP domain AMED_5729 IPR011991 ArsR-like helix-turn-helix domain AMED_5729 IPR002577 Helix-turn-helix, HxlR type AMED_5729 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5729 IPR036390 Winged helix DNA-binding domain superfamily AMED_5731 IPR000835 MarR-type HTH domain AMED_5731 IPR011991 ArsR-like helix-turn-helix domain AMED_5731 IPR036390 Winged helix DNA-binding domain superfamily AMED_5731 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5732 IPR023790 Chloride channel, voltage-gated, ClcB AMED_5732 IPR001807 Chloride channel, voltage gated AMED_5732 IPR014743 Chloride channel, core AMED_5740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_5740 IPR014297 Dimethylsulphoxide reductase, chain B AMED_5740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_5747 IPR024002 Formate/nitrite transporter, conserved site AMED_5747 IPR000292 Formate/nitrite transporter AMED_5747 IPR023271 Aquaporin-like AMED_5749 IPR004680 Citrate transporter-like domain AMED_5749 IPR000802 Arsenical pump membrane protein, ArsB AMED_5753 IPR002293 Amino acid/polyamine transporter I AMED_5754 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative AMED_5754 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_5754 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_5757 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMED_5757 IPR002346 Molybdopterin dehydrogenase, FAD-binding AMED_5757 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_5757 IPR036318 FAD-binding, type PCMH-like superfamily AMED_5757 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AMED_5757 IPR016166 FAD-binding domain, PCMH-type AMED_5758 IPR002888 [2Fe-2S]-binding AMED_5758 IPR036884 [2Fe-2S]-binding domain superfamily AMED_5758 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_5758 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_5758 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_5758 IPR012675 Beta-grasp domain superfamily AMED_5760 IPR020471 Aldo/keto reductase AMED_5760 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_5760 IPR023210 NADP-dependent oxidoreductase domain AMED_5761 IPR013149 Alcohol dehydrogenase, C-terminal AMED_5761 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_5761 IPR027399 Alcohol dehydrogenase GroES-associated AMED_5761 IPR013154 Alcohol dehydrogenase, N-terminal AMED_5761 IPR011032 GroES-like superfamily AMED_5761 IPR036291 NAD(P)-binding domain superfamily AMED_5762 IPR036291 NAD(P)-binding domain superfamily AMED_5762 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5762 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5762 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_5764 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_5764 IPR018170 Aldo/keto reductase, conserved site AMED_5764 IPR020471 Aldo/keto reductase AMED_5764 IPR023210 NADP-dependent oxidoreductase domain AMED_5769 IPR016007 Alpha-L-rhamnosidase AMED_5769 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMED_5769 IPR008928 Six-hairpin glycosidase superfamily AMED_5769 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5769 IPR013783 Immunoglobulin-like fold AMED_5769 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMED_5769 IPR036116 Fibronectin type III superfamily AMED_5769 IPR008979 Galactose-binding-like domain superfamily AMED_5769 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMED_5769 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMED_5770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5770 IPR035906 MetI-like superfamily AMED_5771 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_5771 IPR035906 MetI-like superfamily AMED_5772 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5772 IPR000843 LacI-type HTH domain AMED_5772 IPR028082 Periplasmic binding protein-like I AMED_5772 IPR023588 Transcription regulator HTH, PurR AMED_5773 IPR023588 Transcription regulator HTH, PurR AMED_5773 IPR028082 Periplasmic binding protein-like I AMED_5773 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5773 IPR000843 LacI-type HTH domain AMED_5777 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_5777 IPR000843 LacI-type HTH domain AMED_5777 IPR028082 Periplasmic binding protein-like I AMED_5781 IPR018062 HTH domain AraC-type, conserved site AMED_5781 IPR003313 AraC-type arabinose-binding/dimerisation domain AMED_5781 IPR009057 Homeobox-like domain superfamily AMED_5781 IPR018060 DNA binding HTH domain, AraC-type AMED_5781 IPR037923 Transcription regulator HTH-like AMED_5782 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal AMED_5782 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain AMED_5782 IPR013783 Immunoglobulin-like fold AMED_5782 IPR008979 Galactose-binding-like domain superfamily AMED_5782 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5782 IPR008928 Six-hairpin glycosidase superfamily AMED_5782 IPR036116 Fibronectin type III superfamily AMED_5782 IPR016007 Alpha-L-rhamnosidase AMED_5782 IPR035398 Alpha-L-rhamnosidase C-terminal domain AMED_5782 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain AMED_5784 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5784 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5784 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5784 IPR000792 Transcription regulator LuxR, C-terminal AMED_5784 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5806 IPR025161 Putative transposase IS4/IS5 family AMED_5809 IPR013422 CRISPR-associated protein Cas5, N-terminal AMED_5809 IPR010147 CRISPR-associated protein, CasD AMED_5809 IPR021124 CRISPR-associated protein, Cas5 AMED_5810 IPR010148 CRISPR-associated protein, CT1975 AMED_5814 IPR035011 CRISPR-associated endonuclease/helicase Cas3 AMED_5814 IPR006474 Helicase Cas3, CRISPR-associated, core AMED_5814 IPR038257 CRISPR-associated Cas3-type HD domain superfamily AMED_5814 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5814 IPR006483 CRISPR-associated Cas3-type HD domain AMED_5814 IPR041372 Cas3, C-terminal AMED_5814 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_5827 IPR008928 Six-hairpin glycosidase superfamily AMED_5827 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5827 IPR018366 Carbohydrate-binding type-2, conserved site AMED_5827 IPR001919 Carbohydrate-binding type-2 domain AMED_5827 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_5827 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_5827 IPR023309 Endoglucanase F, domain 2 AMED_5827 IPR027390 Endoglucanase F, domain 3 AMED_5827 IPR003961 Fibronectin type III AMED_5827 IPR036116 Fibronectin type III superfamily AMED_5827 IPR000556 Glycoside hydrolase, 48F AMED_5827 IPR013783 Immunoglobulin-like fold AMED_5831 IPR031107 Small heat shock protein HSP20 AMED_5831 IPR008978 HSP20-like chaperone AMED_5831 IPR002068 Alpha crystallin/Hsp20 domain AMED_5833 IPR036928 Amidase signature (AS) superfamily AMED_5833 IPR023631 Amidase signature domain AMED_5833 IPR020556 Amidase, conserved site AMED_5833 IPR000120 Amidase AMED_5833 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMED_5834 IPR011789 Cu(I)-responsive transcriptional regulator AMED_5834 IPR009061 Putative DNA-binding domain superfamily AMED_5834 IPR000551 MerR-type HTH domain AMED_5834 IPR015358 Transcription regulator MerR, DNA binding AMED_5835 IPR036390 Winged helix DNA-binding domain superfamily AMED_5835 IPR011991 ArsR-like helix-turn-helix domain AMED_5835 IPR001845 HTH ArsR-type DNA-binding domain AMED_5835 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5836 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AMED_5836 IPR027470 Cation efflux protein, cytoplasmic domain AMED_5836 IPR002524 Cation efflux protein AMED_5836 IPR027469 Cation efflux transmembrane domain superfamily AMED_5839 IPR014036 DeoR C-terminal sensor domain AMED_5839 IPR037171 NagB/RpiA transferase-like AMED_5839 IPR001034 DeoR-type HTH domain AMED_5839 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5839 IPR036390 Winged helix DNA-binding domain superfamily AMED_5839 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMED_5841 IPR036291 NAD(P)-binding domain superfamily AMED_5841 IPR000683 Oxidoreductase, N-terminal AMED_5841 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase AMED_5841 IPR004104 Oxidoreductase, C-terminal AMED_5846 IPR006059 Bacterial extracellular solute-binding protein AMED_5849 IPR011009 Protein kinase-like domain superfamily AMED_5849 IPR031634 Protein kinase G, rubredoxin domain AMED_5849 IPR000719 Protein kinase domain AMED_5849 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5849 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain AMED_5849 IPR008271 Serine/threonine-protein kinase, active site AMED_5852 IPR030287 Fe(3+) ions import ATP-binding protein FbpC AMED_5852 IPR015853 ABC transporter, ferric cation import, FbpC AMED_5852 IPR008995 Molybdate/tungstate binding, C-terminal AMED_5852 IPR017871 ABC transporter, conserved site AMED_5852 IPR003439 ABC transporter-like AMED_5852 IPR003593 AAA+ ATPase domain AMED_5852 IPR013611 Transport-associated OB, type 2 AMED_5852 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5854 IPR037175 Kynurenine formamidase superfamily AMED_5854 IPR007325 Kynurenine formamidase/cyclase-like AMED_5855 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_5855 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_5855 IPR000399 TPP-binding enzyme, conserved site AMED_5855 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_5855 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_5855 IPR029061 Thiamin diphosphate-binding fold AMED_5859 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5859 IPR011006 CheY-like superfamily AMED_5859 IPR001789 Signal transduction response regulator, receiver domain AMED_5859 IPR000792 Transcription regulator LuxR, C-terminal AMED_5861 IPR023048 NADH-azoreductase, FMN-dependent AMED_5861 IPR003680 Flavodoxin-like fold AMED_5861 IPR029039 Flavoprotein-like superfamily AMED_5862 IPR000835 MarR-type HTH domain AMED_5862 IPR023187 Transcriptional regulator MarR-type, conserved site AMED_5862 IPR023071 Transcriptional regulator, SlyA AMED_5862 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5862 IPR036390 Winged helix DNA-binding domain superfamily AMED_5863 IPR005791 Protein translocase subunit SecD AMED_5863 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMED_5863 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMED_5865 IPR021295 Protein of unknown function DUF2867 AMED_5865 IPR016040 NAD(P)-binding domain AMED_5865 IPR036291 NAD(P)-binding domain superfamily AMED_5867 IPR036390 Winged helix DNA-binding domain superfamily AMED_5867 IPR005119 LysR, substrate-binding AMED_5867 IPR012787 Pca transcription factor PcaQ AMED_5867 IPR000847 Transcription regulator HTH, LysR AMED_5867 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5869 IPR002912 ACT domain AMED_5869 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_5869 IPR005789 Threonine dehydratase, catabolic AMED_5869 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_5869 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_5872 IPR000064 Endopeptidase, NLPC/P60 domain AMED_5872 IPR038765 Papain-like cysteine peptidase superfamily AMED_5877 IPR012340 Nucleic acid-binding, OB-fold AMED_5877 IPR011129 Cold shock domain AMED_5877 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5877 IPR041703 Transcription termination factor Rho, ATP binding domain AMED_5877 IPR011112 Rho termination factor, N-terminal AMED_5877 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMED_5877 IPR003593 AAA+ ATPase domain AMED_5877 IPR004665 Transcription termination factor Rho AMED_5877 IPR011113 Rho termination factor, RNA-binding domain AMED_5877 IPR036269 Rho termination factor, N-terminal domain superfamily AMED_5880 IPR001000 Glycoside hydrolase family 10 domain AMED_5880 IPR031158 Glycosyl hydrolases family 10, active site AMED_5880 IPR017853 Glycoside hydrolase superfamily AMED_5880 IPR035992 Ricin B-like lectins AMED_5880 IPR000772 Ricin B, lectin domain AMED_5882 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5882 IPR036291 NAD(P)-binding domain superfamily AMED_5882 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5883 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5883 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5883 IPR036291 NAD(P)-binding domain superfamily AMED_5884 IPR029056 Ribokinase-like AMED_5884 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AMED_5885 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_5885 IPR036397 Ribonuclease H superfamily AMED_5885 IPR029033 Histidine phosphatase superfamily AMED_5885 IPR012337 Ribonuclease H-like superfamily AMED_5885 IPR014636 RNase H, phosphoglycerate mutase domain-containing AMED_5885 IPR002156 Ribonuclease H domain AMED_5886 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5886 IPR000700 PAS-associated, C-terminal AMED_5886 IPR035965 PAS domain superfamily AMED_5886 IPR013656 PAS fold-4 AMED_5886 IPR036457 PPM-type phosphatase domain superfamily AMED_5886 IPR001932 PPM-type phosphatase domain AMED_5886 IPR002645 STAS domain AMED_5886 IPR036513 STAS domain superfamily AMED_5886 IPR000014 PAS domain AMED_5886 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5889 IPR035965 PAS domain superfamily AMED_5889 IPR036513 STAS domain superfamily AMED_5889 IPR002645 STAS domain AMED_5889 IPR000700 PAS-associated, C-terminal AMED_5889 IPR000014 PAS domain AMED_5889 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5889 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5889 IPR001932 PPM-type phosphatase domain AMED_5889 IPR036457 PPM-type phosphatase domain superfamily AMED_5889 IPR013656 PAS fold-4 AMED_5891 IPR001789 Signal transduction response regulator, receiver domain AMED_5891 IPR011006 CheY-like superfamily AMED_5891 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_5891 IPR000014 PAS domain AMED_5891 IPR000700 PAS-associated, C-terminal AMED_5891 IPR005467 Histidine kinase domain AMED_5891 IPR013656 PAS fold-4 AMED_5891 IPR035965 PAS domain superfamily AMED_5891 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_5891 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_5891 IPR001610 PAC motif AMED_5891 IPR003594 Histidine kinase/HSP90-like ATPase AMED_5891 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_5895 IPR008928 Six-hairpin glycosidase superfamily AMED_5895 IPR015220 Glucodextranase, N-terminal AMED_5895 IPR006425 Glucoamylase, bacterial AMED_5895 IPR012341 Six-hairpin glycosidase-like superfamily AMED_5895 IPR011013 Galactose mutarotase-like domain superfamily AMED_5895 IPR000165 Glucoamylase AMED_5895 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_5895 IPR011613 GH15-like domain AMED_5896 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_5896 IPR007061 Protein of unknown function DUF664 AMED_5897 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_5897 IPR023210 NADP-dependent oxidoreductase domain AMED_5897 IPR020471 Aldo/keto reductase AMED_5900 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AMED_5900 IPR000639 Epoxide hydrolase-like AMED_5900 IPR029058 Alpha/Beta hydrolase fold AMED_5900 IPR000073 Alpha/beta hydrolase fold-1 AMED_5903 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_5903 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_5903 IPR019734 Tetratricopeptide repeat AMED_5903 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5903 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5903 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5903 IPR013026 Tetratricopeptide repeat-containing domain AMED_5903 IPR005158 Bacterial transcriptional activator domain AMED_5903 IPR002182 NB-ARC AMED_5915 IPR002104 Integrase, catalytic domain AMED_5915 IPR004107 Integrase, SAM-like, N-terminal AMED_5915 IPR013762 Integrase-like, catalytic domain superfamily AMED_5915 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_5915 IPR023009 Tyrosine recombinase XerC/XerD AMED_5915 IPR010998 Integrase/recombinase, N-terminal AMED_5916 IPR015590 Aldehyde dehydrogenase domain AMED_5916 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_5916 IPR016161 Aldehyde/histidinol dehydrogenase AMED_5916 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_5916 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_5926 IPR002569 Peptide methionine sulphoxide reductase MsrA AMED_5926 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AMED_5927 IPR007484 Peptidase M28 AMED_5927 IPR041756 Peptidase M28, SGAP-like AMED_5927 IPR013856 Peptidase M4 domain AMED_5927 IPR001570 Peptidase M4, C-terminal AMED_5927 IPR027268 Peptidase M4/M1, CTD superfamily AMED_5927 IPR007484 Peptidase M28 AMED_5927 IPR041756 Peptidase M28, SGAP-like AMED_5927 IPR013856 Peptidase M4 domain AMED_5927 IPR001570 Peptidase M4, C-terminal AMED_5927 IPR027268 Peptidase M4/M1, CTD superfamily AMED_5929 IPR003439 ABC transporter-like AMED_5929 IPR025302 Domain of unknown function DUF4162 AMED_5929 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_5929 IPR003593 AAA+ ATPase domain AMED_5929 IPR017871 ABC transporter, conserved site AMED_5929 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5930 IPR000412 ABC-2 transporter AMED_5930 IPR013525 ABC-2 type transporter AMED_5931 IPR004378 F420H(2)-dependent quinone reductase AMED_5931 IPR012349 FMN-binding split barrel AMED_5933 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5933 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5933 IPR036291 NAD(P)-binding domain superfamily AMED_5934 IPR000719 Protein kinase domain AMED_5934 IPR005543 PASTA domain AMED_5934 IPR011009 Protein kinase-like domain superfamily AMED_5934 IPR017441 Protein kinase, ATP binding site AMED_5934 IPR008271 Serine/threonine-protein kinase, active site AMED_5937 IPR028628 Sirtuin, class U AMED_5937 IPR026590 Sirtuin family, catalytic core domain AMED_5937 IPR026591 Sirtuin, catalytic core small domain superfamily AMED_5937 IPR003000 Sirtuin family AMED_5937 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_5939 IPR019554 Soluble ligand binding domain AMED_5939 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AMED_5939 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AMED_5939 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AMED_5939 IPR011537 NADH ubiquinone oxidoreductase, F subunit AMED_5939 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AMED_5939 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AMED_5943 IPR007312 Phosphoesterase AMED_5943 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMED_5948 IPR010126 Esterase, PHB depolymerase AMED_5948 IPR029058 Alpha/Beta hydrolase fold AMED_5953 IPR020846 Major facilitator superfamily domain AMED_5953 IPR036259 MFS transporter superfamily AMED_5953 IPR005829 Sugar transporter, conserved site AMED_5953 IPR005828 Major facilitator, sugar transporter-like AMED_5954 IPR011294 3-hydroxybutyrate dehydrogenase AMED_5954 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_5954 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_5954 IPR036291 NAD(P)-binding domain superfamily AMED_5958 IPR020845 AMP-binding, conserved site AMED_5958 IPR000873 AMP-dependent synthetase/ligase AMED_5958 IPR042099 AMP-dependent synthetase-like superfamily AMED_5958 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5963 IPR011704 ATPase, dynein-related, AAA domain AMED_5963 IPR003593 AAA+ ATPase domain AMED_5963 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5965 IPR002035 von Willebrand factor, type A AMED_5965 IPR008912 Uncharacterised protein family CoxE-like AMED_5965 IPR036465 von Willebrand factor A-like domain superfamily AMED_5966 IPR035977 Ribosomal protein L36 superfamily AMED_5966 IPR000473 Ribosomal protein L36 AMED_5968 IPR002577 Helix-turn-helix, HxlR type AMED_5968 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5968 IPR036390 Winged helix DNA-binding domain superfamily AMED_5969 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5969 IPR020946 Flavin monooxygenase-like AMED_5970 IPR008929 Chondroitin AC/alginate lyase AMED_5970 IPR011013 Galactose mutarotase-like domain superfamily AMED_5970 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_5970 IPR038970 Polysaccharide lyase 8 AMED_5970 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical AMED_5970 IPR003159 Polysaccharide lyase family 8, central domain AMED_5970 IPR011071 Polysaccharide lyase family 8-like, C-terminal AMED_5970 IPR004103 Polysaccharide lyase family 8, C-terminal AMED_5971 IPR016161 Aldehyde/histidinol dehydrogenase AMED_5971 IPR015590 Aldehyde dehydrogenase domain AMED_5971 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_5971 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_5973 IPR034593 Mandelate racemase-like AMED_5973 IPR036849 Enolase-like, C-terminal domain superfamily AMED_5973 IPR029065 Enolase C-terminal domain-like AMED_5973 IPR029017 Enolase-like, N-terminal AMED_5973 IPR034598 D-Glucarate dehydratase-like AMED_5973 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_5973 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_5974 IPR013785 Aldolase-type TIM barrel AMED_5974 IPR002220 DapA-like AMED_5974 IPR017655 5-dehydro-4-deoxyglucarate dehydratase AMED_5976 IPR029016 GAF-like domain superfamily AMED_5976 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_5976 IPR036390 Winged helix DNA-binding domain superfamily AMED_5976 IPR005471 Transcription regulator IclR, N-terminal AMED_5976 IPR014757 Transcription regulator IclR, C-terminal AMED_5977 IPR016040 NAD(P)-binding domain AMED_5977 IPR036291 NAD(P)-binding domain superfamily AMED_5980 IPR002509 NodB homology domain AMED_5980 IPR014132 Sporulation polysaccharide deacetylase, PdaB AMED_5980 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMED_5982 IPR001789 Signal transduction response regulator, receiver domain AMED_5982 IPR016032 Signal transduction response regulator, C-terminal effector AMED_5982 IPR000792 Transcription regulator LuxR, C-terminal AMED_5982 IPR011006 CheY-like superfamily AMED_5987 IPR017938 Riboflavin synthase-like beta-barrel AMED_5987 IPR000951 Phthalate dioxygenase reductase AMED_5987 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_5987 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_5987 IPR012675 Beta-grasp domain superfamily AMED_5987 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_5987 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_5987 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_5990 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AMED_5990 IPR039697 Iron-type alcohol dehydrogenase-like AMED_5991 IPR002938 FAD-binding domain AMED_5991 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_5992 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMED_5992 IPR029000 Cyclophilin-like domain superfamily AMED_5995 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMED_5995 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMED_5995 IPR042097 Aminopeptidase N-like , N-terminal AMED_5995 IPR034016 Aminopeptidase N-type AMED_5995 IPR024571 ERAP1-like C-terminal domain AMED_5996 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_5996 IPR001242 Condensation domain AMED_5996 IPR020845 AMP-binding, conserved site AMED_5996 IPR000873 AMP-dependent synthetase/ligase AMED_5996 IPR010071 Amino acid adenylation domain AMED_5996 IPR036736 ACP-like superfamily AMED_5996 IPR025110 AMP-binding enzyme, C-terminal domain AMED_5996 IPR010060 Non-ribosomal peptide synthase AMED_5996 IPR006162 Phosphopantetheine attachment site AMED_5996 IPR009081 Phosphopantetheine binding ACP domain AMED_5996 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_5996 IPR042099 AMP-dependent synthetase-like superfamily AMED_5997 IPR005225 Small GTP-binding protein domain AMED_5997 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5997 IPR015946 K homology domain-like, alpha/beta AMED_5997 IPR032859 GTPase Der, C-terminal KH-domain-like AMED_5997 IPR006073 GTP binding domain AMED_5997 IPR016484 GTP-binding protein EngA AMED_5997 IPR031166 EngA-type guanine nucleotide-binding (G) domain AMED_5997 IPR003593 AAA+ ATPase domain AMED_5999 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_5999 IPR011994 Cytidylate kinase domain AMED_5999 IPR003136 Cytidylate kinase AMED_6003 IPR006153 Cation/H+ exchanger AMED_6003 IPR038770 Sodium/solute symporter superfamily AMED_6004 IPR029058 Alpha/Beta hydrolase fold AMED_6004 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_6004 IPR008979 Galactose-binding-like domain superfamily AMED_6004 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_6005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6005 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative AMED_6005 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_6006 IPR036986 RNA-binding S4 domain superfamily AMED_6006 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMED_6006 IPR006145 Pseudouridine synthase, RsuA/RluA AMED_6006 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMED_6006 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMED_6006 IPR002942 RNA-binding S4 domain AMED_6006 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMED_6007 IPR005234 Chromosome segregation/condensation protein ScpB AMED_6007 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6007 IPR036390 Winged helix DNA-binding domain superfamily AMED_6008 IPR003768 Segregation and condensation protein A AMED_6010 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6010 IPR025669 AAA domain AMED_6011 IPR023009 Tyrosine recombinase XerC/XerD AMED_6011 IPR011932 Tyrosine recombinase XerD AMED_6011 IPR004107 Integrase, SAM-like, N-terminal AMED_6011 IPR010998 Integrase/recombinase, N-terminal AMED_6011 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_6011 IPR002104 Integrase, catalytic domain AMED_6011 IPR013762 Integrase-like, catalytic domain superfamily AMED_6013 IPR000086 NUDIX hydrolase domain AMED_6013 IPR015797 NUDIX hydrolase-like domain superfamily AMED_6014 IPR017926 Glutamine amidotransferase AMED_6014 IPR017456 CTP synthase, N-terminal AMED_6014 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6014 IPR004468 CTP synthase AMED_6014 IPR029062 Class I glutamine amidotransferase-like AMED_6014 IPR033828 CTP synthase GATase domain AMED_6016 IPR000485 AsnC-type HTH domain AMED_6016 IPR011711 GntR, C-terminal AMED_6016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_6016 IPR000524 Transcription regulator HTH, GntR AMED_6016 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6016 IPR036390 Winged helix DNA-binding domain superfamily AMED_6017 IPR038271 Purine-cytosine permease superfamily AMED_6017 IPR001248 Purine-cytosine permease AMED_6017 IPR012681 Nucleobase cation symporter-1, NCS1 AMED_6018 IPR015942 Asp/Glu/hydantoin racemase AMED_6021 IPR021522 Copper transporter MctB AMED_6024 IPR020843 Polyketide synthase, enoylreductase domain AMED_6024 IPR036291 NAD(P)-binding domain superfamily AMED_6024 IPR004627 L-threonine 3-dehydrogenase AMED_6024 IPR011032 GroES-like superfamily AMED_6024 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_6024 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6024 IPR013149 Alcohol dehydrogenase, C-terminal AMED_6026 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6026 IPR003395 RecF/RecN/SMC, N-terminal AMED_6026 IPR004604 DNA recombination/repair protein RecN AMED_6027 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AMED_6027 IPR002504 NAD kinase AMED_6027 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMED_6027 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMED_6028 IPR002942 RNA-binding S4 domain AMED_6028 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6028 IPR036986 RNA-binding S4 domain superfamily AMED_6028 IPR004538 Haemolysin A /rRNA methyltransferase TlyA AMED_6028 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AMED_6030 IPR036412 HAD-like superfamily AMED_6030 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMED_6030 IPR041065 GCN5-related N-acetyltransferase-like domain AMED_6030 IPR023214 HAD superfamily AMED_6032 IPR036986 RNA-binding S4 domain superfamily AMED_6032 IPR002942 RNA-binding S4 domain AMED_6032 IPR024088 Tyrosine-tRNA ligase, bacterial-type AMED_6032 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 AMED_6032 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6032 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMED_6032 IPR002307 Tyrosine-tRNA ligase AMED_6032 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_6033 IPR011034 Formyl transferase-like, C-terminal domain superfamily AMED_6033 IPR003180 Methylpurine-DNA glycosylase AMED_6033 IPR036995 Methylpurine-DNA glycosylase superfamily AMED_6035 IPR025311 Domain of unknown function DUF4166 AMED_6037 IPR024083 Fumarase/histidase, N-terminal AMED_6037 IPR008948 L-Aspartase-like AMED_6037 IPR022761 Fumarate lyase, N-terminal AMED_6037 IPR000362 Fumarate lyase family AMED_6037 IPR020557 Fumarate lyase, conserved site AMED_6037 IPR009049 Argininosuccinate lyase AMED_6037 IPR029419 Argininosuccinate lyase, C-terminal AMED_6038 IPR018223 Argininosuccinate synthase, conserved site AMED_6038 IPR023434 Argininosuccinate synthase, type 1 subfamily AMED_6038 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AMED_6038 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6038 IPR001518 Argininosuccinate synthase AMED_6039 IPR020900 Arginine repressor, DNA-binding domain AMED_6039 IPR036251 Arginine repressor, C-terminal domain superfamily AMED_6039 IPR020899 Arginine repressor, C-terminal AMED_6039 IPR001669 Arginine repressor AMED_6039 IPR036390 Winged helix DNA-binding domain superfamily AMED_6039 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6040 IPR006130 Aspartate/ornithine carbamoyltransferase AMED_6040 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AMED_6040 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AMED_6040 IPR002292 Ornithine/putrescine carbamoyltransferase AMED_6040 IPR024904 Ornithine carbamoyltransferase AMED_6040 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AMED_6041 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_6041 IPR004636 Acetylornithine/Succinylornithine transaminase family AMED_6041 IPR005814 Aminotransferase class-III AMED_6041 IPR015424 Pyridoxal phosphate-dependent transferase AMED_6041 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_6042 IPR036393 Acetylglutamate kinase-like superfamily AMED_6042 IPR004662 Acetylglutamate kinase family AMED_6042 IPR001057 Glutamate/acetylglutamate kinase AMED_6042 IPR037528 Acetylglutamate kinase ArgB AMED_6042 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AMED_6042 IPR001048 Aspartate/glutamate/uridylate kinase AMED_6043 IPR002813 Arginine biosynthesis protein ArgJ AMED_6043 IPR016117 ArgJ-like domain superfamily AMED_6043 IPR042195 ArgJ beta chain, C-terminal domain AMED_6044 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AMED_6044 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AMED_6044 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMED_6044 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AMED_6044 IPR036291 NAD(P)-binding domain superfamily AMED_6048 IPR029058 Alpha/Beta hydrolase fold AMED_6048 IPR000073 Alpha/beta hydrolase fold-1 AMED_6050 IPR009061 Putative DNA-binding domain superfamily AMED_6050 IPR005121 Ferrodoxin-fold anticodon-binding domain AMED_6050 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily AMED_6050 IPR012340 Nucleic acid-binding, OB-fold AMED_6050 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AMED_6050 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMED_6050 IPR005147 tRNA synthetase, B5-domain AMED_6050 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain AMED_6050 IPR002547 tRNA-binding domain AMED_6050 IPR005146 B3/B4 tRNA-binding domain AMED_6050 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AMED_6051 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AMED_6051 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AMED_6051 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMED_6051 IPR002319 Phenylalanyl-tRNA synthetase AMED_6051 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AMED_6051 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_6053 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMED_6053 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AMED_6053 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_6053 IPR029028 Alpha/beta knot methyltransferases AMED_6053 IPR029064 50S ribosomal protein L30e-like AMED_6054 IPR005813 Ribosomal protein L20 AMED_6054 IPR035566 Ribosomal protein L20, C-terminal AMED_6055 IPR021137 Ribosomal protein L35 AMED_6055 IPR001706 Ribosomal protein L35, non-mitochondrial AMED_6055 IPR037229 Ribosomal protein L35 superfamily AMED_6056 IPR019815 Translation initiation factor 3, C-terminal AMED_6056 IPR019813 Translation initiation factor 3, conserved site AMED_6056 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily AMED_6056 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily AMED_6056 IPR001288 Translation initiation factor 3 AMED_6056 IPR019814 Translation initiation factor 3, N-terminal AMED_6058 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_6058 IPR036390 Winged helix DNA-binding domain superfamily AMED_6058 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6058 IPR000524 Transcription regulator HTH, GntR AMED_6058 IPR011711 GntR, C-terminal AMED_6059 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AMED_6059 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial AMED_6059 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_6059 IPR005965 1-aminocyclopropane-1-carboxylate deaminase AMED_6059 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_6061 IPR011991 ArsR-like helix-turn-helix domain AMED_6061 IPR029016 GAF-like domain superfamily AMED_6061 IPR014757 Transcription regulator IclR, C-terminal AMED_6061 IPR005471 Transcription regulator IclR, N-terminal AMED_6061 IPR036390 Winged helix DNA-binding domain superfamily AMED_6061 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6062 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_6062 IPR029056 Ribokinase-like AMED_6062 IPR002139 Ribokinase/fructokinase AMED_6062 IPR011611 Carbohydrate kinase PfkB AMED_6064 IPR013108 Amidohydrolase 3 AMED_6064 IPR023100 D-aminoacylase, insert domain superfamily AMED_6064 IPR032466 Metal-dependent hydrolase AMED_6064 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_6065 IPR003474 Gluconate transporter AMED_6066 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMED_6066 IPR019405 Lactonase, 7-bladed beta propeller AMED_6066 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AMED_6068 IPR035906 MetI-like superfamily AMED_6068 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_6069 IPR035906 MetI-like superfamily AMED_6069 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_6070 IPR029018 Beta-hexosaminidase-like, domain 2 AMED_6070 IPR025705 Beta-hexosaminidase AMED_6070 IPR015883 Glycoside hydrolase family 20, catalytic domain AMED_6070 IPR017853 Glycoside hydrolase superfamily AMED_6070 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMED_6072 IPR001789 Signal transduction response regulator, receiver domain AMED_6072 IPR036390 Winged helix DNA-binding domain superfamily AMED_6072 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6072 IPR024187 Signal transduction response regulator, citrate/malate metabolism AMED_6072 IPR011006 CheY-like superfamily AMED_6073 IPR013767 PAS fold AMED_6073 IPR033463 Single cache domain 3 AMED_6073 IPR039506 SpoOB, alpha-helical domain AMED_6073 IPR029151 Periplasmic sensor-like domain superfamily AMED_6073 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6073 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AMED_6073 IPR035965 PAS domain superfamily AMED_6073 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6073 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6073 IPR005467 Histidine kinase domain AMED_6073 IPR000014 PAS domain AMED_6074 IPR023954 C4-dicarboxylate transport protein AMED_6074 IPR001991 Sodium:dicarboxylate symporter AMED_6074 IPR018107 Sodium:dicarboxylate symporter, conserved site AMED_6074 IPR036458 Sodium:dicarboxylate symporter superfamily AMED_6076 IPR020846 Major facilitator superfamily domain AMED_6076 IPR011701 Major facilitator superfamily AMED_6076 IPR036259 MFS transporter superfamily AMED_6076 IPR005829 Sugar transporter, conserved site AMED_6079 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6079 IPR007630 RNA polymerase sigma-70 region 4 AMED_6079 IPR007627 RNA polymerase sigma-70 region 2 AMED_6079 IPR013325 RNA polymerase sigma factor, region 2 AMED_6079 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6079 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6079 IPR039425 RNA polymerase sigma-70 like AMED_6079 IPR014284 RNA polymerase sigma-70 like domain AMED_6082 IPR017871 ABC transporter, conserved site AMED_6082 IPR003439 ABC transporter-like AMED_6082 IPR041102 UvrA, interaction domain AMED_6082 IPR041552 UvrA DNA-binding domain AMED_6082 IPR004602 UvrABC system subunit A AMED_6082 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6084 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_6084 IPR001279 Metallo-beta-lactamase AMED_6090 IPR014710 RmlC-like jelly roll fold AMED_6090 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal AMED_6090 IPR018490 Cyclic nucleotide-binding-like AMED_6090 IPR000595 Cyclic nucleotide-binding domain AMED_6090 IPR018488 Cyclic nucleotide-binding, conserved site AMED_6090 IPR013099 Potassium channel domain AMED_6091 IPR002156 Ribonuclease H domain AMED_6091 IPR036397 Ribonuclease H superfamily AMED_6091 IPR022892 Ribonuclease HI AMED_6091 IPR012337 Ribonuclease H-like superfamily AMED_6092 IPR032710 NTF2-like domain superfamily AMED_6092 IPR023006 Uncharacterised protein family UPF0225 AMED_6094 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_6094 IPR005084 Carbohydrate binding module family 6 AMED_6094 IPR028829 Exo-beta-D-glucosaminidase AMED_6094 IPR008979 Galactose-binding-like domain superfamily AMED_6094 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain AMED_6094 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_6094 IPR013783 Immunoglobulin-like fold AMED_6094 IPR017853 Glycoside hydrolase superfamily AMED_6094 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_6095 IPR029058 Alpha/Beta hydrolase fold AMED_6095 IPR002018 Carboxylesterase, type B AMED_6095 IPR019826 Carboxylesterase type B, active site AMED_6097 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria AMED_6097 IPR006153 Cation/H+ exchanger AMED_6097 IPR018422 Cation/H+ exchanger, CPA1 family AMED_6098 IPR029033 Histidine phosphatase superfamily AMED_6098 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AMED_6098 IPR023086 Phosphoglycerate mutase, GpmB, probable AMED_6098 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_6100 IPR038468 Transport accessory protein MmpS, soluble domain superfamily AMED_6100 IPR008693 Transport accessory protein MmpS AMED_6102 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_6102 IPR028082 Periplasmic binding protein-like I AMED_6102 IPR000843 LacI-type HTH domain AMED_6107 IPR029058 Alpha/Beta hydrolase fold AMED_6107 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMED_6107 IPR011659 WD40-like Beta Propeller AMED_6107 IPR011042 Six-bladed beta-propeller, TolB-like AMED_6108 IPR022369 Integral membrane protein TerC, riboswitch-linked AMED_6108 IPR005496 Integral membrane protein TerC AMED_6109 IPR003593 AAA+ ATPase domain AMED_6109 IPR003439 ABC transporter-like AMED_6109 IPR017871 ABC transporter, conserved site AMED_6109 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6113 IPR001753 Enoyl-CoA hydratase/isomerase AMED_6113 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_6113 IPR029045 ClpP/crotonase-like domain superfamily AMED_6113 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_6115 IPR008761 Peptidase S37, tripeptidyl aminopeptidase AMED_6115 IPR029058 Alpha/Beta hydrolase fold AMED_6117 IPR006935 Helicase/UvrB, N-terminal AMED_6117 IPR004807 UvrABC system, subunit B AMED_6117 IPR036876 UVR domain superfamily AMED_6117 IPR001943 UVR domain AMED_6117 IPR024759 UvrB, YAD/RRR-motif-containing domain AMED_6117 IPR041471 UvrB, interaction domain AMED_6117 IPR001650 Helicase, C-terminal AMED_6117 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6117 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_6122 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6122 IPR007344 GrpB/Dephospho-CoA kinase AMED_6122 IPR001977 Dephospho-CoA kinase AMED_6127 IPR003029 S1 domain AMED_6127 IPR022967 RNA-binding domain, S1 AMED_6127 IPR012340 Nucleic acid-binding, OB-fold AMED_6128 IPR013216 Methyltransferase type 11 AMED_6128 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6132 IPR023908 xxxLxxG heptad repeat AMED_6132 IPR017501 Phage infection protein, YhgE, C-terminal AMED_6132 IPR017500 Phage infection protein, YhgE, N-terminal AMED_6133 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6133 IPR013572 Transcription regulator MAATS, C-terminal AMED_6133 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_6133 IPR009057 Homeobox-like domain superfamily AMED_6133 IPR001647 DNA-binding HTH domain, TetR-type AMED_6134 IPR011051 RmlC-like cupin domain superfamily AMED_6134 IPR018062 HTH domain AraC-type, conserved site AMED_6134 IPR018060 DNA binding HTH domain, AraC-type AMED_6134 IPR009057 Homeobox-like domain superfamily AMED_6134 IPR003313 AraC-type arabinose-binding/dimerisation domain AMED_6134 IPR014710 RmlC-like jelly roll fold AMED_6135 IPR036291 NAD(P)-binding domain superfamily AMED_6135 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 AMED_6135 IPR020843 Polyketide synthase, enoylreductase domain AMED_6135 IPR013149 Alcohol dehydrogenase, C-terminal AMED_6135 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_6135 IPR011032 GroES-like superfamily AMED_6135 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6138 IPR018320 DNA polymerase 1 AMED_6138 IPR036397 Ribonuclease H superfamily AMED_6138 IPR012337 Ribonuclease H-like superfamily AMED_6138 IPR029060 PIN-like domain superfamily AMED_6138 IPR008918 Helix-hairpin-helix motif, class 2 AMED_6138 IPR002298 DNA polymerase A AMED_6138 IPR020045 DNA polymerase I-like, H3TH domain AMED_6138 IPR001098 DNA-directed DNA polymerase, family A, palm domain AMED_6138 IPR019760 DNA-directed DNA polymerase, family A, conserved site AMED_6138 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMED_6138 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AMED_6138 IPR002562 3'-5' exonuclease domain AMED_6138 IPR002421 5'-3' exonuclease, N-terminal AMED_6139 IPR003736 Phenylacetic acid degradation-related domain AMED_6139 IPR026576 Proofreading thioesterase EntH AMED_6139 IPR029069 HotDog domain superfamily AMED_6139 IPR006683 Thioesterase domain AMED_6140 IPR005119 LysR, substrate-binding AMED_6140 IPR000847 Transcription regulator HTH, LysR AMED_6140 IPR036390 Winged helix DNA-binding domain superfamily AMED_6140 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6143 IPR001851 ABC transporter, permease AMED_6144 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AMED_6144 IPR001851 ABC transporter, permease AMED_6145 IPR003593 AAA+ ATPase domain AMED_6145 IPR003439 ABC transporter-like AMED_6145 IPR017871 ABC transporter, conserved site AMED_6145 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMED_6145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6146 IPR017871 ABC transporter, conserved site AMED_6146 IPR003593 AAA+ ATPase domain AMED_6146 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMED_6146 IPR003439 ABC transporter-like AMED_6146 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6148 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6148 IPR005561 ANTAR domain AMED_6148 IPR001789 Signal transduction response regulator, receiver domain AMED_6148 IPR008327 Signal transduction response regulator, antiterminator AMED_6148 IPR011006 CheY-like superfamily AMED_6150 IPR022081 Domain of unknown function DUF3631 AMED_6159 IPR012340 Nucleic acid-binding, OB-fold AMED_6159 IPR000424 Primosome PriB/single-strand DNA-binding AMED_6159 IPR011344 Single-stranded DNA-binding protein AMED_6168 IPR006776 Sporulation-specific cell division protein SsgB AMED_6168 IPR038658 Sporulation-specific cell division protein SsgB superfamily AMED_6169 IPR000086 NUDIX hydrolase domain AMED_6169 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMED_6169 IPR036412 HAD-like superfamily AMED_6169 IPR020476 NUDIX hydrolase AMED_6169 IPR023214 HAD superfamily AMED_6169 IPR020084 NUDIX hydrolase, conserved site AMED_6169 IPR015797 NUDIX hydrolase-like domain superfamily AMED_6181 IPR037401 SnoaL-like domain AMED_6181 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6181 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6181 IPR032710 NTF2-like domain superfamily AMED_6181 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_6181 IPR014284 RNA polymerase sigma-70 like domain AMED_6181 IPR013325 RNA polymerase sigma factor, region 2 AMED_6181 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6181 IPR007627 RNA polymerase sigma-70 region 2 AMED_6181 IPR039425 RNA polymerase sigma-70 like AMED_6181 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6191 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6191 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6191 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6192 IPR011006 CheY-like superfamily AMED_6192 IPR000792 Transcription regulator LuxR, C-terminal AMED_6192 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6192 IPR001789 Signal transduction response regulator, receiver domain AMED_6196 IPR001789 Signal transduction response regulator, receiver domain AMED_6196 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6196 IPR011006 CheY-like superfamily AMED_6196 IPR000792 Transcription regulator LuxR, C-terminal AMED_6197 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6197 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6197 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6201 IPR036291 NAD(P)-binding domain superfamily AMED_6201 IPR001509 NAD-dependent epimerase/dehydratase AMED_6202 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6202 IPR017871 ABC transporter, conserved site AMED_6202 IPR015850 ABC transporter, phosphate import, PstB AMED_6202 IPR003439 ABC transporter-like AMED_6202 IPR005670 Phosphate transport system permease protein 1 AMED_6202 IPR003593 AAA+ ATPase domain AMED_6205 IPR007627 RNA polymerase sigma-70 region 2 AMED_6205 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6205 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6205 IPR013325 RNA polymerase sigma factor, region 2 AMED_6205 IPR014286 RNA polymerase sigma-70 RpoE type AMED_6205 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6205 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6205 IPR014284 RNA polymerase sigma-70 like domain AMED_6205 IPR039425 RNA polymerase sigma-70 like AMED_6206 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AMED_6206 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AMED_6206 IPR039697 Iron-type alcohol dehydrogenase-like AMED_6207 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_6207 IPR036291 NAD(P)-binding domain superfamily AMED_6207 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_6207 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_6207 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_6207 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_6207 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMED_6208 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_6208 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_6208 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_6208 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_6208 IPR016161 Aldehyde/histidinol dehydrogenase AMED_6208 IPR015590 Aldehyde dehydrogenase domain AMED_6209 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_6209 IPR034589 D-mannonate dehydratase-like AMED_6209 IPR029065 Enolase C-terminal domain-like AMED_6209 IPR029017 Enolase-like, N-terminal AMED_6209 IPR036849 Enolase-like, C-terminal domain superfamily AMED_6209 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AMED_6209 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_6209 IPR034593 Mandelate racemase-like AMED_6212 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_6212 IPR016292 Epoxide hydrolase AMED_6212 IPR010497 Epoxide hydrolase, N-terminal AMED_6212 IPR000639 Epoxide hydrolase-like AMED_6212 IPR029058 Alpha/Beta hydrolase fold AMED_6216 IPR020449 Transcription regulator HTH, AraC- type AMED_6216 IPR029062 Class I glutamine amidotransferase-like AMED_6216 IPR018062 HTH domain AraC-type, conserved site AMED_6216 IPR002818 DJ-1/PfpI AMED_6216 IPR009057 Homeobox-like domain superfamily AMED_6216 IPR018060 DNA binding HTH domain, AraC-type AMED_6217 IPR010497 Epoxide hydrolase, N-terminal AMED_6217 IPR016292 Epoxide hydrolase AMED_6217 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_6217 IPR029058 Alpha/Beta hydrolase fold AMED_6217 IPR000639 Epoxide hydrolase-like AMED_6219 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6219 IPR036291 NAD(P)-binding domain superfamily AMED_6219 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_6223 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6223 IPR014284 RNA polymerase sigma-70 like domain AMED_6223 IPR014322 RNA polymerase sigma-B/F/G type AMED_6223 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6223 IPR007627 RNA polymerase sigma-70 region 2 AMED_6223 IPR007624 RNA polymerase sigma-70 region 3 AMED_6223 IPR000943 RNA polymerase sigma-70 AMED_6223 IPR007630 RNA polymerase sigma-70 region 4 AMED_6223 IPR013325 RNA polymerase sigma factor, region 2 AMED_6227 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMED_6227 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_6227 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_6228 IPR006162 Phosphopantetheine attachment site AMED_6228 IPR036736 ACP-like superfamily AMED_6228 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6228 IPR010060 Non-ribosomal peptide synthase AMED_6228 IPR001242 Condensation domain AMED_6228 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6228 IPR042099 AMP-dependent synthetase-like superfamily AMED_6228 IPR000873 AMP-dependent synthetase/ligase AMED_6228 IPR020845 AMP-binding, conserved site AMED_6228 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6228 IPR010071 Amino acid adenylation domain AMED_6228 IPR009081 Phosphopantetheine binding ACP domain AMED_6229 IPR029058 Alpha/Beta hydrolase fold AMED_6229 IPR001031 Thioesterase AMED_6229 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS AMED_6230 IPR036736 ACP-like superfamily AMED_6230 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6230 IPR020845 AMP-binding, conserved site AMED_6230 IPR009081 Phosphopantetheine binding ACP domain AMED_6230 IPR000873 AMP-dependent synthetase/ligase AMED_6230 IPR006162 Phosphopantetheine attachment site AMED_6230 IPR010071 Amino acid adenylation domain AMED_6230 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6230 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6230 IPR010060 Non-ribosomal peptide synthase AMED_6230 IPR010060 Non-ribosomal peptide synthase AMED_6230 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6230 IPR042099 AMP-dependent synthetase-like superfamily AMED_6230 IPR010071 Amino acid adenylation domain AMED_6230 IPR000873 AMP-dependent synthetase/ligase AMED_6230 IPR006162 Phosphopantetheine attachment site AMED_6230 IPR020845 AMP-binding, conserved site AMED_6230 IPR001242 Condensation domain AMED_6230 IPR036736 ACP-like superfamily AMED_6230 IPR009081 Phosphopantetheine binding ACP domain AMED_6230 IPR001242 Condensation domain AMED_6230 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6230 IPR042099 AMP-dependent synthetase-like superfamily AMED_6230 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6231 IPR020845 AMP-binding, conserved site AMED_6231 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6231 IPR006162 Phosphopantetheine attachment site AMED_6231 IPR010071 Amino acid adenylation domain AMED_6231 IPR029058 Alpha/Beta hydrolase fold AMED_6231 IPR036736 ACP-like superfamily AMED_6231 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6231 IPR010060 Non-ribosomal peptide synthase AMED_6231 IPR000253 Forkhead-associated (FHA) domain AMED_6231 IPR042099 AMP-dependent synthetase-like superfamily AMED_6231 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6231 IPR001242 Condensation domain AMED_6231 IPR008279 PEP-utilising enzyme, mobile domain AMED_6231 IPR013216 Methyltransferase type 11 AMED_6231 IPR009081 Phosphopantetheine binding ACP domain AMED_6231 IPR020802 Polyketide synthase, thioesterase domain AMED_6231 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6231 IPR036637 Phosphohistidine domain superfamily AMED_6231 IPR000873 AMP-dependent synthetase/ligase AMED_6231 IPR001031 Thioesterase AMED_6232 IPR020845 AMP-binding, conserved site AMED_6232 IPR036736 ACP-like superfamily AMED_6232 IPR010071 Amino acid adenylation domain AMED_6232 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6232 IPR009081 Phosphopantetheine binding ACP domain AMED_6232 IPR000873 AMP-dependent synthetase/ligase AMED_6232 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6232 IPR001242 Condensation domain AMED_6232 IPR006162 Phosphopantetheine attachment site AMED_6232 IPR010060 Non-ribosomal peptide synthase AMED_6232 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6232 IPR042099 AMP-dependent synthetase-like superfamily AMED_6234 IPR036291 NAD(P)-binding domain superfamily AMED_6234 IPR010060 Non-ribosomal peptide synthase AMED_6234 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6234 IPR013120 Male sterility, NAD-binding AMED_6234 IPR006162 Phosphopantetheine attachment site AMED_6234 IPR010080 Thioester reductase-like domain AMED_6234 IPR009081 Phosphopantetheine binding ACP domain AMED_6234 IPR010071 Amino acid adenylation domain AMED_6234 IPR001242 Condensation domain AMED_6234 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6234 IPR042099 AMP-dependent synthetase-like superfamily AMED_6234 IPR000873 AMP-dependent synthetase/ligase AMED_6234 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6234 IPR020845 AMP-binding, conserved site AMED_6234 IPR036736 ACP-like superfamily AMED_6236 IPR037407 MbtH-like protein AMED_6236 IPR038020 MbtH-like domain superfamily AMED_6236 IPR005153 MbtH-like domain AMED_6237 IPR006162 Phosphopantetheine attachment site AMED_6237 IPR009081 Phosphopantetheine binding ACP domain AMED_6237 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6237 IPR001242 Condensation domain AMED_6237 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6237 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6237 IPR036736 ACP-like superfamily AMED_6237 IPR010071 Amino acid adenylation domain AMED_6237 IPR000873 AMP-dependent synthetase/ligase AMED_6237 IPR020845 AMP-binding, conserved site AMED_6237 IPR042099 AMP-dependent synthetase-like superfamily AMED_6237 IPR029058 Alpha/Beta hydrolase fold AMED_6237 IPR001031 Thioesterase AMED_6238 IPR001128 Cytochrome P450 AMED_6238 IPR002397 Cytochrome P450, B-class AMED_6238 IPR017972 Cytochrome P450, conserved site AMED_6238 IPR036396 Cytochrome P450 superfamily AMED_6240 IPR033195 Glycine/inosamine-phosphate amidinotransferase AMED_6241 IPR010071 Amino acid adenylation domain AMED_6241 IPR006162 Phosphopantetheine attachment site AMED_6241 IPR009081 Phosphopantetheine binding ACP domain AMED_6241 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6241 IPR042099 AMP-dependent synthetase-like superfamily AMED_6241 IPR000873 AMP-dependent synthetase/ligase AMED_6241 IPR020845 AMP-binding, conserved site AMED_6241 IPR010060 Non-ribosomal peptide synthase AMED_6241 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6241 IPR036736 ACP-like superfamily AMED_6241 IPR010080 Thioester reductase-like domain AMED_6241 IPR036291 NAD(P)-binding domain superfamily AMED_6241 IPR013120 Male sterility, NAD-binding AMED_6241 IPR001242 Condensation domain AMED_6241 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6242 IPR000873 AMP-dependent synthetase/ligase AMED_6242 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6242 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6242 IPR006162 Phosphopantetheine attachment site AMED_6242 IPR010080 Thioester reductase-like domain AMED_6242 IPR010071 Amino acid adenylation domain AMED_6242 IPR042099 AMP-dependent synthetase-like superfamily AMED_6242 IPR020845 AMP-binding, conserved site AMED_6242 IPR036736 ACP-like superfamily AMED_6242 IPR009081 Phosphopantetheine binding ACP domain AMED_6242 IPR013120 Male sterility, NAD-binding AMED_6242 IPR001242 Condensation domain AMED_6242 IPR036291 NAD(P)-binding domain superfamily AMED_6242 IPR010060 Non-ribosomal peptide synthase AMED_6242 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6243 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6243 IPR042099 AMP-dependent synthetase-like superfamily AMED_6243 IPR009081 Phosphopantetheine binding ACP domain AMED_6243 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_6243 IPR001242 Condensation domain AMED_6243 IPR010071 Amino acid adenylation domain AMED_6243 IPR036736 ACP-like superfamily AMED_6243 IPR006162 Phosphopantetheine attachment site AMED_6243 IPR000873 AMP-dependent synthetase/ligase AMED_6243 IPR010060 Non-ribosomal peptide synthase AMED_6243 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6243 IPR020845 AMP-binding, conserved site AMED_6244 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6244 IPR001789 Signal transduction response regulator, receiver domain AMED_6244 IPR000792 Transcription regulator LuxR, C-terminal AMED_6244 IPR011006 CheY-like superfamily AMED_6245 IPR017685 HTH-type transcriptional regulator ArgP AMED_6245 IPR005119 LysR, substrate-binding AMED_6245 IPR036390 Winged helix DNA-binding domain superfamily AMED_6245 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6245 IPR000847 Transcription regulator HTH, LysR AMED_6247 IPR011701 Major facilitator superfamily AMED_6247 IPR036259 MFS transporter superfamily AMED_6247 IPR020846 Major facilitator superfamily domain AMED_6248 IPR016040 NAD(P)-binding domain AMED_6248 IPR036291 NAD(P)-binding domain superfamily AMED_6249 IPR026579 Cell division protein FtsQ AMED_6249 IPR034746 POTRA domain AMED_6249 IPR005548 Cell division protein FtsQ/DivIB AMED_6249 IPR013685 POTRA domain, FtsQ-type AMED_6250 IPR013221 Mur ligase, central AMED_6250 IPR005758 UDP-N-acetylmuramate--L-alanine ligase AMED_6250 IPR000713 Mur ligase, N-terminal catalytic domain AMED_6250 IPR036565 Mur-like, catalytic domain superfamily AMED_6250 IPR004101 Mur ligase, C-terminal AMED_6250 IPR036615 Mur ligase, C-terminal domain superfamily AMED_6251 IPR006009 N-acetylglucosaminyltransferase, MurG AMED_6251 IPR007235 Glycosyl transferase, family 28, C-terminal AMED_6251 IPR004276 Glycosyltransferase family 28, N-terminal domain AMED_6252 IPR013437 Probable peptidoglycan glycosyltransferase FtsW AMED_6252 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AMED_6252 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AMED_6253 IPR036615 Mur ligase, C-terminal domain superfamily AMED_6253 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AMED_6253 IPR036565 Mur-like, catalytic domain superfamily AMED_6253 IPR013221 Mur ligase, central AMED_6254 IPR000715 Glycosyl transferase, family 4 AMED_6254 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AMED_6254 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AMED_6255 IPR036565 Mur-like, catalytic domain superfamily AMED_6255 IPR035911 MurE/MurF, N-terminal AMED_6255 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase AMED_6255 IPR004101 Mur ligase, C-terminal AMED_6255 IPR000713 Mur ligase, N-terminal catalytic domain AMED_6255 IPR036615 Mur ligase, C-terminal domain superfamily AMED_6255 IPR013221 Mur ligase, central AMED_6256 IPR000713 Mur ligase, N-terminal catalytic domain AMED_6256 IPR035911 MurE/MurF, N-terminal AMED_6256 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AMED_6256 IPR013221 Mur ligase, central AMED_6256 IPR036615 Mur ligase, C-terminal domain superfamily AMED_6256 IPR004101 Mur ligase, C-terminal AMED_6256 IPR036565 Mur-like, catalytic domain superfamily AMED_6258 IPR001460 Penicillin-binding protein, transpeptidase AMED_6258 IPR005311 Penicillin-binding protein, dimerisation domain AMED_6258 IPR012338 Beta-lactamase/transpeptidase-like AMED_6258 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AMED_6260 IPR002903 Ribosomal RNA small subunit methyltransferase H AMED_6260 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AMED_6260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6261 IPR003444 Transcriptional regulator MraZ AMED_6261 IPR020603 MraZ domain AMED_6261 IPR035642 MraZ, N-terminal AMED_6261 IPR038619 MraZ superfamily AMED_6261 IPR007159 SpoVT-AbrB domain AMED_6261 IPR037914 SpoVT-AbrB domain superfamily AMED_6261 IPR035644 MraZ, C-terminal AMED_6267 IPR011703 ATPase, AAA-3 AMED_6267 IPR041628 ChlI/MoxR, AAA lid domain AMED_6267 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6269 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal AMED_6269 IPR002931 Transglutaminase-like AMED_6269 IPR025403 Domain of unknown function DUF4129 AMED_6269 IPR038765 Papain-like cysteine peptidase superfamily AMED_6271 IPR017961 DNA polymerase, Y-family, little finger domain AMED_6271 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMED_6271 IPR001126 UmuC domain AMED_6271 IPR022880 DNA polymerase IV AMED_6273 IPR025669 AAA domain AMED_6273 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6274 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMED_6274 IPR010979 Ribosomal protein S13-like, H2TH AMED_6274 IPR035937 MutM-like, N-terminal AMED_6274 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AMED_6274 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AMED_6274 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMED_6275 IPR006330 Adenosine/adenine deaminase AMED_6275 IPR001365 Adenosine/AMP deaminase domain AMED_6275 IPR032466 Metal-dependent hydrolase AMED_6277 IPR005719 Dihydroorotate dehydrogenase, class 2 AMED_6277 IPR005720 Dihydroorotate dehydrogenase domain AMED_6277 IPR001295 Dihydroorotate dehydrogenase, conserved site AMED_6277 IPR013785 Aldolase-type TIM barrel AMED_6278 IPR000120 Amidase AMED_6278 IPR020556 Amidase, conserved site AMED_6278 IPR023631 Amidase signature domain AMED_6278 IPR036928 Amidase signature (AS) superfamily AMED_6280 IPR007157 PspA/IM30 AMED_6281 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_6281 IPR001387 Cro/C1-type helix-turn-helix domain AMED_6282 IPR036425 MoaB/Mog-like domain superfamily AMED_6282 IPR001453 MoaB/Mog domain AMED_6282 IPR008136 CinA, C-terminal AMED_6282 IPR036653 CinA-like, C-terminal AMED_6282 IPR041424 CinA, KH domain AMED_6282 IPR008135 Competence-induced protein CinA AMED_6283 IPR000462 CDP-alcohol phosphatidyltransferase AMED_6283 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AMED_6284 IPR013848 Methylthiotransferase, N-terminal AMED_6284 IPR007197 Radical SAM AMED_6284 IPR023404 Radical SAM, alpha/beta horseshoe AMED_6284 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMED_6284 IPR041582 RimO, TRAM domain AMED_6284 IPR020612 Methylthiotransferase, conserved site AMED_6284 IPR005839 Methylthiotransferase AMED_6284 IPR006638 Elp3/MiaB/NifB AMED_6284 IPR002792 TRAM domain AMED_6284 IPR005840 Ribosomal protein S12 methylthiotransferase RimO AMED_6285 IPR016181 Acyl-CoA N-acyltransferase AMED_6285 IPR000182 GNAT domain AMED_6285 IPR010167 Amino-acid N-acetyltransferase AMED_6291 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6291 IPR002543 FtsK domain AMED_6291 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6291 IPR018541 FtsK gamma domain AMED_6291 IPR025199 DNA translocase FtsK, 4TM region AMED_6291 IPR036390 Winged helix DNA-binding domain superfamily AMED_6291 IPR041027 FtsK alpha domain AMED_6293 IPR005025 NADPH-dependent FMN reductase-like AMED_6293 IPR010089 Flavoprotein WrbA-like AMED_6293 IPR029039 Flavoprotein-like superfamily AMED_6293 IPR008254 Flavodoxin/nitric oxide synthase AMED_6297 IPR011265 GABA permease AMED_6297 IPR004840 Amino acid permease, conserved site AMED_6297 IPR004841 Amino acid permease/ SLC12A domain AMED_6299 IPR001279 Metallo-beta-lactamase AMED_6299 IPR041636 Ribonuclease J, C-terminal AMED_6299 IPR030854 Ribonuclease J, bacteria AMED_6299 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_6299 IPR042173 Ribonuclease J, domain 2 AMED_6299 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMED_6299 IPR004613 Ribonuclease J AMED_6300 IPR013785 Aldolase-type TIM barrel AMED_6300 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AMED_6300 IPR002220 DapA-like AMED_6300 IPR020625 Schiff base-forming aldolase, active site AMED_6300 IPR020624 Schiff base-forming aldolase, conserved site AMED_6301 IPR011009 Protein kinase-like domain superfamily AMED_6301 IPR000719 Protein kinase domain AMED_6301 IPR008271 Serine/threonine-protein kinase, active site AMED_6303 IPR005025 NADPH-dependent FMN reductase-like AMED_6303 IPR029039 Flavoprotein-like superfamily AMED_6303 IPR001046 NRAMP family AMED_6305 IPR003669 Thymidylate synthase ThyX AMED_6305 IPR036098 Thymidylate synthase ThyX superfamily AMED_6308 IPR009351 Protein of unknown function DUF1006 AMED_6313 IPR005119 LysR, substrate-binding AMED_6313 IPR036390 Winged helix DNA-binding domain superfamily AMED_6313 IPR000847 Transcription regulator HTH, LysR AMED_6313 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6314 IPR015168 SsuA/THI5-like AMED_6315 IPR013026 Tetratricopeptide repeat-containing domain AMED_6315 IPR019734 Tetratricopeptide repeat AMED_6315 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6316 IPR022664 Dihydrodipicolinate reductase, conserved site AMED_6316 IPR000846 Dihydrodipicolinate reductase, N-terminal AMED_6316 IPR036291 NAD(P)-binding domain superfamily AMED_6316 IPR023940 Dihydrodipicolinate reductase AMED_6316 IPR022663 Dihydrodipicolinate reductase, C-terminal AMED_6317 IPR007863 Peptidase M16, C-terminal AMED_6317 IPR001431 Peptidase M16, zinc-binding site AMED_6317 IPR011765 Peptidase M16, N-terminal AMED_6317 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMED_6318 IPR036345 Exoribonuclease, PH domain 2 superfamily AMED_6318 IPR001247 Exoribonuclease, phosphorolytic domain 1 AMED_6318 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AMED_6318 IPR022967 RNA-binding domain, S1 AMED_6318 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase AMED_6318 IPR027408 PNPase/RNase PH domain superfamily AMED_6318 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AMED_6318 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_6318 IPR003029 S1 domain AMED_6318 IPR012340 Nucleic acid-binding, OB-fold AMED_6318 IPR004088 K Homology domain, type 1 AMED_6318 IPR036612 K Homology domain, type 1 superfamily AMED_6318 IPR004087 K Homology domain AMED_6318 IPR012162 Polyribonucleotide nucleotidyltransferase AMED_6319 IPR009068 S15/NS1, RNA-binding AMED_6319 IPR005290 Ribosomal protein S15, bacterial-type AMED_6319 IPR000589 Ribosomal protein S15 AMED_6322 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6322 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AMED_6322 IPR015864 FAD synthetase AMED_6322 IPR023465 Riboflavin kinase domain superfamily AMED_6322 IPR023468 Riboflavin kinase AMED_6322 IPR002606 Riboflavin kinase, bacterial AMED_6323 IPR015947 PUA-like superfamily AMED_6323 IPR036974 PUA domain superfamily AMED_6323 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal AMED_6323 IPR002501 Pseudouridine synthase II, N-terminal AMED_6323 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMED_6323 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMED_6323 IPR014780 tRNA pseudouridine synthase II, TruB AMED_6326 IPR036259 MFS transporter superfamily AMED_6326 IPR011701 Major facilitator superfamily AMED_6326 IPR020846 Major facilitator superfamily domain AMED_6328 IPR038763 DHH phosphoesterase superfamily AMED_6328 IPR001667 DDH domain AMED_6328 IPR003156 DHHA1 domain AMED_6329 IPR013216 Methyltransferase type 11 AMED_6329 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6330 IPR031905 Flotillin, C-terminal domain AMED_6330 IPR036013 Band 7/SPFH domain superfamily AMED_6330 IPR027705 Flotillin family AMED_6330 IPR001107 Band 7 domain AMED_6333 IPR013216 Methyltransferase type 11 AMED_6333 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6336 IPR000238 Ribosome-binding factor A AMED_6336 IPR020053 Ribosome-binding factor A, conserved site AMED_6336 IPR023799 Ribosome-binding factor A domain superfamily AMED_6336 IPR015946 K homology domain-like, alpha/beta AMED_6338 IPR000178 Translation initiation factor aIF-2, bacterial-like AMED_6338 IPR009000 Translation protein, beta-barrel domain superfamily AMED_6338 IPR006847 Translation initiation factor IF-2, N-terminal AMED_6338 IPR005225 Small GTP-binding protein domain AMED_6338 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMED_6338 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6338 IPR000795 Transcription factor, GTP-binding domain AMED_6338 IPR023115 Translation initiation factor IF- 2, domain 3 AMED_6338 IPR015760 Translation initiation factor IF- 2 AMED_6340 IPR009019 K homology domain superfamily, prokaryotic type AMED_6340 IPR012340 Nucleic acid-binding, OB-fold AMED_6340 IPR030842 Transcription termination/antitermination protein NusA, bacterial AMED_6340 IPR036555 NusA, N-terminal domain superfamily AMED_6340 IPR003029 S1 domain AMED_6340 IPR013735 Transcription factor NusA, N-terminal AMED_6340 IPR010213 Transcription termination factor NusA AMED_6340 IPR025249 KH domain, NusA-like AMED_6340 IPR015946 K homology domain-like, alpha/beta AMED_6341 IPR035956 RimP, N-terminal domain superfamily AMED_6341 IPR003728 Ribosome maturation factor RimP AMED_6341 IPR028998 Ribosome maturation factor RimP, C-terminal AMED_6341 IPR028989 Ribosome maturation factor RimP, N-terminal AMED_6345 IPR040442 Pyruvate kinase-like domain superfamily AMED_6345 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_6345 IPR039556 ICL/PEPM domain AMED_6347 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_6347 IPR039538 BetI-type transcriptional repressor, C-terminal AMED_6347 IPR009057 Homeobox-like domain superfamily AMED_6347 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6347 IPR001647 DNA-binding HTH domain, TetR-type AMED_6349 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6349 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6350 IPR000792 Transcription regulator LuxR, C-terminal AMED_6350 IPR001789 Signal transduction response regulator, receiver domain AMED_6350 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6350 IPR011006 CheY-like superfamily AMED_6352 IPR002577 Helix-turn-helix, HxlR type AMED_6352 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6352 IPR036390 Winged helix DNA-binding domain superfamily AMED_6354 IPR009057 Homeobox-like domain superfamily AMED_6354 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6354 IPR001647 DNA-binding HTH domain, TetR-type AMED_6355 IPR029058 Alpha/Beta hydrolase fold AMED_6355 IPR008979 Galactose-binding-like domain superfamily AMED_6355 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AMED_6355 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal AMED_6358 IPR011006 CheY-like superfamily AMED_6358 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6358 IPR039420 Transcriptional regulatory protein WalR-like AMED_6358 IPR001789 Signal transduction response regulator, receiver domain AMED_6358 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6358 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6359 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6359 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6359 IPR005467 Histidine kinase domain AMED_6359 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_6359 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6359 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_6361 IPR013026 Tetratricopeptide repeat-containing domain AMED_6361 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6361 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6361 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6361 IPR019734 Tetratricopeptide repeat AMED_6361 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6361 IPR005158 Bacterial transcriptional activator domain AMED_6361 IPR002182 NB-ARC AMED_6361 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6365 IPR036390 Winged helix DNA-binding domain superfamily AMED_6365 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6365 IPR000847 Transcription regulator HTH, LysR AMED_6365 IPR005119 LysR, substrate-binding AMED_6366 IPR023606 CoA-transferase family III domain superfamily AMED_6366 IPR017659 Formyl-CoA:oxalate CoA-transferase AMED_6366 IPR003673 CoA-transferase family III AMED_6367 IPR001753 Enoyl-CoA hydratase/isomerase AMED_6367 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_6367 IPR022852 Carnitinyl-CoA dehydratase AMED_6367 IPR029045 ClpP/crotonase-like domain superfamily AMED_6367 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_6368 IPR010451 Acetoacetate decarboxylase AMED_6368 IPR023653 Acetoacetate decarboxylase, bacterial AMED_6368 IPR023375 Acetoacetate decarboxylase domain superfamily AMED_6369 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_6369 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_6369 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_6369 IPR026578 L-carnitine dehydrogenase AMED_6369 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_6369 IPR036291 NAD(P)-binding domain superfamily AMED_6370 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_6370 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_6370 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_6370 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_6370 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_6370 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_6370 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_6371 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_6371 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain AMED_6372 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_6372 IPR036291 NAD(P)-binding domain superfamily AMED_6372 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6373 IPR014284 RNA polymerase sigma-70 like domain AMED_6373 IPR013325 RNA polymerase sigma factor, region 2 AMED_6373 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6373 IPR037401 SnoaL-like domain AMED_6373 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6373 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6373 IPR007627 RNA polymerase sigma-70 region 2 AMED_6373 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_6373 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6373 IPR039425 RNA polymerase sigma-70 like AMED_6373 IPR032710 NTF2-like domain superfamily AMED_6374 IPR003482 Transcription factor WhiB AMED_6374 IPR034768 WhiB-like iron-sulfur binding domain AMED_6376 IPR014284 RNA polymerase sigma-70 like domain AMED_6376 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6376 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6376 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6376 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6376 IPR013325 RNA polymerase sigma factor, region 2 AMED_6376 IPR007627 RNA polymerase sigma-70 region 2 AMED_6376 IPR039425 RNA polymerase sigma-70 like AMED_6377 IPR005119 LysR, substrate-binding AMED_6377 IPR000847 Transcription regulator HTH, LysR AMED_6377 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6377 IPR036390 Winged helix DNA-binding domain superfamily AMED_6378 IPR038770 Sodium/solute symporter superfamily AMED_6378 IPR016833 Putative sodium bile acid cotransporter AMED_6380 IPR008972 Cupredoxin AMED_6380 IPR002355 Multicopper oxidase, copper-binding site AMED_6380 IPR011706 Multicopper oxidase, type 2 AMED_6380 IPR011707 Multicopper oxidase, type 3 AMED_6380 IPR033138 Multicopper oxidases, conserved site AMED_6381 IPR017972 Cytochrome P450, conserved site AMED_6381 IPR036396 Cytochrome P450 superfamily AMED_6381 IPR001128 Cytochrome P450 AMED_6381 IPR002397 Cytochrome P450, B-class AMED_6384 IPR036291 NAD(P)-binding domain superfamily AMED_6384 IPR016040 NAD(P)-binding domain AMED_6386 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6386 IPR001845 HTH ArsR-type DNA-binding domain AMED_6386 IPR036390 Winged helix DNA-binding domain superfamily AMED_6386 IPR011991 ArsR-like helix-turn-helix domain AMED_6389 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6389 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6389 IPR013026 Tetratricopeptide repeat-containing domain AMED_6389 IPR005158 Bacterial transcriptional activator domain AMED_6389 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6389 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6389 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6389 IPR002182 NB-ARC AMED_6389 IPR019734 Tetratricopeptide repeat AMED_6390 IPR005877 YSIRK Gram-positive signal peptide AMED_6390 IPR011252 Fibrogen-binding domain 1 AMED_6390 IPR008966 Adhesion domain superfamily AMED_6390 IPR019931 LPXTG cell wall anchor domain AMED_6390 IPR033764 SD-repeat containing protein, B domain AMED_6390 IPR019948 Gram-positive LPXTG cell wall anchor AMED_6390 IPR013783 Immunoglobulin-like fold AMED_6390 IPR041171 SDR-like Ig domain AMED_6396 IPR010111 Kynureninase AMED_6396 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_6396 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_6396 IPR015424 Pyridoxal phosphate-dependent transferase AMED_6396 IPR000192 Aminotransferase class V domain AMED_6398 IPR023594 Haloalkane dehalogenase, subfamily 2 AMED_6398 IPR000073 Alpha/beta hydrolase fold-1 AMED_6398 IPR029058 Alpha/Beta hydrolase fold AMED_6400 IPR005804 Fatty acid desaturase domain AMED_6400 IPR033885 Alkane/xylene monooxygenase AMED_6408 IPR032710 NTF2-like domain superfamily AMED_6408 IPR007627 RNA polymerase sigma-70 region 2 AMED_6408 IPR014284 RNA polymerase sigma-70 like domain AMED_6408 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6408 IPR013325 RNA polymerase sigma factor, region 2 AMED_6408 IPR037401 SnoaL-like domain AMED_6408 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6408 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6411 IPR001647 DNA-binding HTH domain, TetR-type AMED_6411 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6411 IPR009057 Homeobox-like domain superfamily AMED_6411 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_6414 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_6414 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_6414 IPR006710 Glycoside hydrolase, family 43 AMED_6414 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain AMED_6417 IPR014284 RNA polymerase sigma-70 like domain AMED_6417 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6417 IPR013325 RNA polymerase sigma factor, region 2 AMED_6417 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6417 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6417 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6417 IPR007627 RNA polymerase sigma-70 region 2 AMED_6418 IPR011008 Dimeric alpha-beta barrel AMED_6418 IPR005545 YCII-related AMED_6419 IPR029058 Alpha/Beta hydrolase fold AMED_6419 IPR000073 Alpha/beta hydrolase fold-1 AMED_6419 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase AMED_6420 IPR001647 DNA-binding HTH domain, TetR-type AMED_6420 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_6420 IPR009057 Homeobox-like domain superfamily AMED_6421 IPR036291 NAD(P)-binding domain superfamily AMED_6421 IPR013149 Alcohol dehydrogenase, C-terminal AMED_6421 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6421 IPR011032 GroES-like superfamily AMED_6421 IPR020843 Polyketide synthase, enoylreductase domain AMED_6426 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMED_6426 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMED_6426 IPR018181 Heat shock protein 70, conserved site AMED_6426 IPR013126 Heat shock protein 70 family AMED_6426 IPR012725 Chaperone DnaK AMED_6429 IPR005920 Imidazolonepropionase AMED_6429 IPR032466 Metal-dependent hydrolase AMED_6429 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_6429 IPR006680 Amidohydrolase-related AMED_6431 IPR000772 Ricin B, lectin domain AMED_6431 IPR035992 Ricin B-like lectins AMED_6431 IPR001000 Glycoside hydrolase family 10 domain AMED_6431 IPR031158 Glycosyl hydrolases family 10, active site AMED_6431 IPR017853 Glycoside hydrolase superfamily AMED_6432 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_6432 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_6432 IPR001000 Glycoside hydrolase family 10 domain AMED_6432 IPR017853 Glycoside hydrolase superfamily AMED_6432 IPR001919 Carbohydrate-binding type-2 domain AMED_6437 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_6437 IPR006680 Amidohydrolase-related AMED_6437 IPR032466 Metal-dependent hydrolase AMED_6437 IPR004722 Dihydroorotase AMED_6437 IPR002195 Dihydroorotase, conserved site AMED_6438 IPR017972 Cytochrome P450, conserved site AMED_6438 IPR002397 Cytochrome P450, B-class AMED_6438 IPR001128 Cytochrome P450 AMED_6438 IPR036396 Cytochrome P450 superfamily AMED_6443 IPR000792 Transcription regulator LuxR, C-terminal AMED_6443 IPR001789 Signal transduction response regulator, receiver domain AMED_6443 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6443 IPR011006 CheY-like superfamily AMED_6446 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6446 IPR005158 Bacterial transcriptional activator domain AMED_6446 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6446 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6446 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6449 IPR002656 Acyltransferase 3 AMED_6449 IPR036514 SGNH hydrolase superfamily AMED_6457 IPR013026 Tetratricopeptide repeat-containing domain AMED_6457 IPR005158 Bacterial transcriptional activator domain AMED_6457 IPR002182 NB-ARC AMED_6457 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6457 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6457 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6457 IPR019734 Tetratricopeptide repeat AMED_6457 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6457 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6463 IPR023210 NADP-dependent oxidoreductase domain AMED_6463 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_6465 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6465 IPR016236 Serine/threonine-protein kinase PknK, predicted AMED_6465 IPR017441 Protein kinase, ATP binding site AMED_6465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6465 IPR000719 Protein kinase domain AMED_6465 IPR041664 Orc1-like, AAA ATPase domain AMED_6465 IPR011009 Protein kinase-like domain superfamily AMED_6466 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_6466 IPR036884 [2Fe-2S]-binding domain superfamily AMED_6466 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_6466 IPR002888 [2Fe-2S]-binding AMED_6466 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_6468 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6468 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6468 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6468 IPR000792 Transcription regulator LuxR, C-terminal AMED_6468 IPR041617 MalT-like TPR region AMED_6468 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6468 IPR023768 Transcriptional regulator HTH-type, MalT AMED_6469 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_6469 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_6469 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_6469 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_6469 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_6469 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_6469 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_6470 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain AMED_6470 IPR029058 Alpha/Beta hydrolase fold AMED_6470 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II AMED_6471 IPR011942 Poly(3-hydroxyalkanoate) depolymerase AMED_6471 IPR000073 Alpha/beta hydrolase fold-1 AMED_6471 IPR029058 Alpha/Beta hydrolase fold AMED_6472 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6472 IPR020459 AMP-binding AMED_6472 IPR042099 AMP-dependent synthetase-like superfamily AMED_6472 IPR000873 AMP-dependent synthetase/ligase AMED_6472 IPR020845 AMP-binding, conserved site AMED_6473 IPR000639 Epoxide hydrolase-like AMED_6473 IPR000073 Alpha/beta hydrolase fold-1 AMED_6473 IPR029058 Alpha/Beta hydrolase fold AMED_6473 IPR016292 Epoxide hydrolase AMED_6475 IPR000073 Alpha/beta hydrolase fold-1 AMED_6475 IPR029058 Alpha/Beta hydrolase fold AMED_6475 IPR000639 Epoxide hydrolase-like AMED_6476 IPR001789 Signal transduction response regulator, receiver domain AMED_6476 IPR011006 CheY-like superfamily AMED_6476 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6476 IPR000792 Transcription regulator LuxR, C-terminal AMED_6477 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6477 IPR000792 Transcription regulator LuxR, C-terminal AMED_6477 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6477 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6477 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6478 IPR005829 Sugar transporter, conserved site AMED_6478 IPR011701 Major facilitator superfamily AMED_6478 IPR020846 Major facilitator superfamily domain AMED_6478 IPR036259 MFS transporter superfamily AMED_6481 IPR011701 Major facilitator superfamily AMED_6481 IPR020846 Major facilitator superfamily domain AMED_6481 IPR005828 Major facilitator, sugar transporter-like AMED_6481 IPR036259 MFS transporter superfamily AMED_6481 IPR005829 Sugar transporter, conserved site AMED_6481 IPR004736 MFS transporter, metabolite:H symporter AMED_6489 IPR017871 ABC transporter, conserved site AMED_6489 IPR003439 ABC transporter-like AMED_6489 IPR003593 AAA+ ATPase domain AMED_6489 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6491 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6491 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6491 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6492 IPR000792 Transcription regulator LuxR, C-terminal AMED_6492 IPR011006 CheY-like superfamily AMED_6492 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6492 IPR001789 Signal transduction response regulator, receiver domain AMED_6495 IPR032818 DedA family AMED_6495 IPR032816 SNARE associated Golgi protein AMED_6497 IPR003824 Undecaprenyl-diphosphatase UppP AMED_6500 IPR036908 RlpA-like domain superfamily AMED_6503 IPR003593 AAA+ ATPase domain AMED_6503 IPR003439 ABC transporter-like AMED_6503 IPR017871 ABC transporter, conserved site AMED_6503 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6505 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6506 IPR011006 CheY-like superfamily AMED_6506 IPR000792 Transcription regulator LuxR, C-terminal AMED_6506 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6506 IPR001789 Signal transduction response regulator, receiver domain AMED_6510 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6510 IPR013570 Transcription regulator YsiA, C-terminal AMED_6510 IPR001647 DNA-binding HTH domain, TetR-type AMED_6510 IPR009057 Homeobox-like domain superfamily AMED_6511 IPR036291 NAD(P)-binding domain superfamily AMED_6511 IPR001509 NAD-dependent epimerase/dehydratase AMED_6512 IPR036291 NAD(P)-binding domain superfamily AMED_6512 IPR008030 NmrA-like domain AMED_6515 IPR029058 Alpha/Beta hydrolase fold AMED_6515 IPR013094 Alpha/beta hydrolase fold-3 AMED_6516 IPR029058 Alpha/Beta hydrolase fold AMED_6516 IPR013094 Alpha/beta hydrolase fold-3 AMED_6517 IPR036259 MFS transporter superfamily AMED_6517 IPR020846 Major facilitator superfamily domain AMED_6517 IPR011701 Major facilitator superfamily AMED_6517 IPR004638 Drug resistance transporter EmrB-like AMED_6518 IPR036291 NAD(P)-binding domain superfamily AMED_6518 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6522 IPR018060 DNA binding HTH domain, AraC-type AMED_6522 IPR009057 Homeobox-like domain superfamily AMED_6522 IPR018062 HTH domain AraC-type, conserved site AMED_6522 IPR002818 DJ-1/PfpI AMED_6522 IPR020449 Transcription regulator HTH, AraC- type AMED_6522 IPR029062 Class I glutamine amidotransferase-like AMED_6527 IPR006121 Heavy metal-associated domain, HMA AMED_6527 IPR017969 Heavy-metal-associated, conserved site AMED_6527 IPR023214 HAD superfamily AMED_6527 IPR027256 P-type ATPase, subfamily IB AMED_6527 IPR036412 HAD-like superfamily AMED_6527 IPR001757 P-type ATPase AMED_6527 IPR000579 Cation-transporting P-type ATPase A/B AMED_6527 IPR008250 P-type ATPase, A domain superfamily AMED_6527 IPR023299 P-type ATPase, cytoplasmic domain N AMED_6527 IPR018303 P-type ATPase, phosphorylation site AMED_6527 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_6527 IPR036163 Heavy metal-associated domain superfamily AMED_6529 IPR013325 RNA polymerase sigma factor, region 2 AMED_6529 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6529 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6529 IPR007627 RNA polymerase sigma-70 region 2 AMED_6529 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6529 IPR014284 RNA polymerase sigma-70 like domain AMED_6529 IPR039425 RNA polymerase sigma-70 like AMED_6529 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6530 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6530 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6530 IPR013325 RNA polymerase sigma factor, region 2 AMED_6530 IPR007627 RNA polymerase sigma-70 region 2 AMED_6530 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_6530 IPR014284 RNA polymerase sigma-70 like domain AMED_6530 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6530 IPR039425 RNA polymerase sigma-70 like AMED_6532 IPR002818 DJ-1/PfpI AMED_6532 IPR029062 Class I glutamine amidotransferase-like AMED_6533 IPR003593 AAA+ ATPase domain AMED_6533 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6533 IPR003439 ABC transporter-like AMED_6533 IPR017871 ABC transporter, conserved site AMED_6534 IPR000522 ABC transporter, permease protein, BtuC-like AMED_6534 IPR037294 ABC transporter, BtuC-like AMED_6537 IPR001757 P-type ATPase AMED_6537 IPR018303 P-type ATPase, phosphorylation site AMED_6537 IPR023299 P-type ATPase, cytoplasmic domain N AMED_6537 IPR027256 P-type ATPase, subfamily IB AMED_6537 IPR036163 Heavy metal-associated domain superfamily AMED_6537 IPR023214 HAD superfamily AMED_6537 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_6537 IPR008250 P-type ATPase, A domain superfamily AMED_6537 IPR006121 Heavy metal-associated domain, HMA AMED_6537 IPR017969 Heavy-metal-associated, conserved site AMED_6537 IPR036412 HAD-like superfamily AMED_6537 IPR000579 Cation-transporting P-type ATPase A/B AMED_6558 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain AMED_6558 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_6558 IPR006656 Molybdopterin oxidoreductase AMED_6558 IPR010051 Periplasmic nitrate reductase, large subunit AMED_6558 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_6558 IPR006657 Molybdopterin dinucleotide-binding domain AMED_6558 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_6558 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMED_6558 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMED_6561 IPR036291 NAD(P)-binding domain superfamily AMED_6561 IPR014184 Formaldehyde dehydrogenase, glutathione-independent AMED_6561 IPR011032 GroES-like superfamily AMED_6561 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMED_6561 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_6561 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6563 IPR016039 Thiolase-like AMED_6563 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_6563 IPR020843 Polyketide synthase, enoylreductase domain AMED_6563 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6563 IPR015083 Polyketide synthase, docking domain AMED_6563 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6563 IPR020807 Polyketide synthase, dehydratase domain AMED_6563 IPR009081 Phosphopantetheine binding ACP domain AMED_6563 IPR006162 Phosphopantetheine attachment site AMED_6563 IPR001227 Acyl transferase domain superfamily AMED_6563 IPR013968 Polyketide synthase, ketoreductase domain AMED_6563 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_6563 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_6563 IPR014043 Acyl transferase AMED_6563 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_6563 IPR036291 NAD(P)-binding domain superfamily AMED_6563 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_6563 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_6563 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_6563 IPR036347 Erythronolide synthase, docking domain superfamily AMED_6563 IPR015357 Erythronolide synthase, docking AMED_6563 IPR036736 ACP-like superfamily AMED_6563 IPR018201 Beta-ketoacyl synthase, active site AMED_6563 IPR011032 GroES-like superfamily AMED_6566 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_6566 IPR015590 Aldehyde dehydrogenase domain AMED_6566 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_6566 IPR016161 Aldehyde/histidinol dehydrogenase AMED_6566 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_6566 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_6568 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_6568 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_6568 IPR029061 Thiamin diphosphate-binding fold AMED_6568 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_6568 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_6568 IPR000399 TPP-binding enzyme, conserved site AMED_6569 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_6569 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_6569 IPR034382 3,6-anhydro-alpha-L-galactonate cycloisomerase AMED_6569 IPR036849 Enolase-like, C-terminal domain superfamily AMED_6569 IPR029017 Enolase-like, N-terminal AMED_6569 IPR029065 Enolase C-terminal domain-like AMED_6570 IPR009051 Alpha-helical ferredoxin AMED_6570 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_6570 IPR004113 FAD-linked oxidase, C-terminal AMED_6570 IPR016166 FAD-binding domain, PCMH-type AMED_6570 IPR036318 FAD-binding, type PCMH-like superfamily AMED_6570 IPR016164 FAD-linked oxidase-like, C-terminal AMED_6570 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_6570 IPR006094 FAD linked oxidase, N-terminal AMED_6573 IPR036291 NAD(P)-binding domain superfamily AMED_6573 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_6573 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_6573 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMED_6573 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_6573 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_6573 IPR011548 3-hydroxyisobutyrate dehydrogenase AMED_6573 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_6574 IPR023865 Aliphatic acid kinase, short-chain, conserved site AMED_6574 IPR000890 Aliphatic acid kinase, short-chain AMED_6574 IPR004372 Acetate/propionate kinase AMED_6575 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal AMED_6575 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site AMED_6575 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal AMED_6575 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase AMED_6575 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_6575 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site AMED_6575 IPR023962 Probable phosphoketolase AMED_6575 IPR029061 Thiamin diphosphate-binding fold AMED_6577 IPR007544 Encapsulating protein for peroxidase AMED_6578 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_6578 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6578 IPR013149 Alcohol dehydrogenase, C-terminal AMED_6578 IPR036291 NAD(P)-binding domain superfamily AMED_6578 IPR027399 Alcohol dehydrogenase GroES-associated AMED_6578 IPR011032 GroES-like superfamily AMED_6581 IPR000802 Arsenical pump membrane protein, ArsB AMED_6581 IPR004680 Citrate transporter-like domain AMED_6582 IPR003439 ABC transporter-like AMED_6582 IPR017871 ABC transporter, conserved site AMED_6582 IPR003593 AAA+ ATPase domain AMED_6582 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6585 IPR023506 Trans-aconitate 2-methyltransferase AMED_6585 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal AMED_6587 IPR006295 DNA primase, DnaG AMED_6587 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMED_6587 IPR013173 DNA primase DnaG, DnaB-binding domain AMED_6587 IPR013264 DNA primase, catalytic core, N-terminal AMED_6587 IPR019475 DNA primase, DnaB-helicase binding domain AMED_6587 IPR034151 Bacterial DnaG primase, TOPRIM domain AMED_6587 IPR006171 TOPRIM domain AMED_6587 IPR030846 DNA primase DnaG, bacteria AMED_6587 IPR002694 Zinc finger, CHC2-type AMED_6587 IPR036977 DNA Primase, CHC2-type zinc finger AMED_6588 IPR014284 RNA polymerase sigma-70 like domain AMED_6588 IPR007627 RNA polymerase sigma-70 region 2 AMED_6588 IPR013325 RNA polymerase sigma factor, region 2 AMED_6588 IPR032710 NTF2-like domain superfamily AMED_6588 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6588 IPR037401 SnoaL-like domain AMED_6588 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6588 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6591 IPR036259 MFS transporter superfamily AMED_6591 IPR011701 Major facilitator superfamily AMED_6591 IPR005829 Sugar transporter, conserved site AMED_6591 IPR020846 Major facilitator superfamily domain AMED_6591 IPR004638 Drug resistance transporter EmrB-like AMED_6595 IPR007061 Protein of unknown function DUF664 AMED_6595 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_6598 IPR026875 Phosphohydrolase-associated domain AMED_6598 IPR006674 HD domain AMED_6598 IPR003607 HD/PDEase domain AMED_6598 IPR023023 dNTP triphosphohydrolase, type 2 AMED_6598 IPR006261 dNTP triphosphohydrolase AMED_6600 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6600 IPR000792 Transcription regulator LuxR, C-terminal AMED_6600 IPR001789 Signal transduction response regulator, receiver domain AMED_6600 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6600 IPR011006 CheY-like superfamily AMED_6601 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6601 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6603 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6603 IPR017871 ABC transporter, conserved site AMED_6603 IPR003439 ABC transporter-like AMED_6603 IPR003593 AAA+ ATPase domain AMED_6604 IPR033731 Glycyl-tRNA synthetase-like core domain AMED_6604 IPR022961 Glycine-tRNA ligase, bacterial AMED_6604 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 AMED_6604 IPR002315 Glycyl-tRNA synthetase AMED_6604 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMED_6604 IPR004154 Anticodon-binding AMED_6604 IPR036621 Anticodon-binding domain superfamily AMED_6604 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_6608 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6608 IPR001845 HTH ArsR-type DNA-binding domain AMED_6608 IPR011991 ArsR-like helix-turn-helix domain AMED_6608 IPR036390 Winged helix DNA-binding domain superfamily AMED_6609 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6609 IPR002481 Ferric-uptake regulator AMED_6609 IPR036390 Winged helix DNA-binding domain superfamily AMED_6612 IPR005524 Predicted permease DUF318 AMED_6614 IPR036424 Decaprenyl diphosphate synthase-like superfamily AMED_6614 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AMED_6614 IPR001441 Decaprenyl diphosphate synthase-like AMED_6615 IPR037278 ARFGAP/RecO-like zinc finger AMED_6615 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMED_6615 IPR012340 Nucleic acid-binding, OB-fold AMED_6615 IPR003717 Recombination protein O, RecO AMED_6617 IPR010432 RDD AMED_6621 IPR004044 K Homology domain, type 2 AMED_6621 IPR015946 K homology domain-like, alpha/beta AMED_6621 IPR006073 GTP binding domain AMED_6621 IPR005662 GTP-binding protein Era AMED_6621 IPR030388 Era-type guanine nucleotide-binding (G) domain AMED_6621 IPR009019 K homology domain superfamily, prokaryotic type AMED_6621 IPR005225 Small GTP-binding protein domain AMED_6621 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6623 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_6623 IPR036318 FAD-binding, type PCMH-like superfamily AMED_6623 IPR002550 CNNM, transmembrane domain AMED_6623 IPR000644 CBS domain AMED_6623 IPR005170 Transporter-associated domain AMED_6624 IPR020549 Endoribonuclease YbeY, conserved site AMED_6624 IPR002036 Endoribonuclease YbeY AMED_6624 IPR023091 Metalloprotease catalytic domain superfamily, predicted AMED_6625 IPR004087 K Homology domain AMED_6625 IPR036612 K Homology domain, type 1 superfamily AMED_6625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6625 IPR003714 PhoH-like protein AMED_6626 IPR019808 Histidine triad, conserved site AMED_6626 IPR001310 Histidine triad (HIT) protein AMED_6626 IPR011146 HIT-like domain AMED_6626 IPR036265 HIT-like superfamily AMED_6627 IPR015947 PUA-like superfamily AMED_6627 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_6627 IPR006700 Ribosomal RNA small subunit methyltransferase E AMED_6627 IPR029028 Alpha/beta knot methyltransferases AMED_6628 IPR001623 DnaJ domain AMED_6628 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AMED_6628 IPR002939 Chaperone DnaJ, C-terminal AMED_6628 IPR036869 Chaperone J-domain superfamily AMED_6628 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMED_6628 IPR012724 Chaperone DnaJ AMED_6628 IPR008971 HSP40/DnaJ peptide-binding AMED_6629 IPR002571 Heat-inducible transcription repressor HrcA AMED_6629 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal AMED_6629 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6629 IPR029016 GAF-like domain superfamily AMED_6629 IPR036390 Winged helix DNA-binding domain superfamily AMED_6629 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily AMED_6634 IPR023210 NADP-dependent oxidoreductase domain AMED_6634 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_6635 IPR015590 Aldehyde dehydrogenase domain AMED_6635 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_6635 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_6635 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_6635 IPR016161 Aldehyde/histidinol dehydrogenase AMED_6635 IPR010061 Methylmalonate-semialdehyde dehydrogenase AMED_6641 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_6641 IPR003660 HAMP domain AMED_6641 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6641 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6641 IPR005467 Histidine kinase domain AMED_6641 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_6641 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6642 IPR011006 CheY-like superfamily AMED_6642 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6642 IPR039420 Transcriptional regulatory protein WalR-like AMED_6642 IPR001789 Signal transduction response regulator, receiver domain AMED_6642 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6642 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6643 IPR038271 Purine-cytosine permease superfamily AMED_6643 IPR001248 Purine-cytosine permease AMED_6643 IPR012681 Nucleobase cation symporter-1, NCS1 AMED_6645 IPR006680 Amidohydrolase-related AMED_6645 IPR011778 Hydantoinase/dihydropyrimidinase AMED_6645 IPR032466 Metal-dependent hydrolase AMED_6645 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_6647 IPR000073 Alpha/beta hydrolase fold-1 AMED_6647 IPR029058 Alpha/Beta hydrolase fold AMED_6648 IPR001466 Beta-lactamase-related AMED_6648 IPR012338 Beta-lactamase/transpeptidase-like AMED_6649 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_6649 IPR039374 Siderophore-interacting protein AMED_6649 IPR007037 Siderophore-interacting protein, C-terminal domain AMED_6649 IPR017938 Riboflavin synthase-like beta-barrel AMED_6649 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_6649 IPR013113 FAD-binding 9, siderophore-interacting AMED_6652 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6652 IPR003012 Tetracycline transcriptional regulator, TetR AMED_6652 IPR004111 Tetracycline repressor TetR, C-terminal AMED_6652 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_6652 IPR009057 Homeobox-like domain superfamily AMED_6652 IPR001647 DNA-binding HTH domain, TetR-type AMED_6653 IPR013149 Alcohol dehydrogenase, C-terminal AMED_6653 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6653 IPR011032 GroES-like superfamily AMED_6653 IPR036291 NAD(P)-binding domain superfamily AMED_6653 IPR020843 Polyketide synthase, enoylreductase domain AMED_6653 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_6654 IPR023404 Radical SAM, alpha/beta horseshoe AMED_6654 IPR034505 Anaerobic coproporphyrinogen-III oxidase AMED_6654 IPR007197 Radical SAM AMED_6654 IPR004559 Heme chaperone HemW-like AMED_6654 IPR006638 Elp3/MiaB/NifB AMED_6656 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMED_6656 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMED_6656 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMED_6656 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMED_6658 IPR011798 Adenosine 5'-phosphosulphate reductase AMED_6658 IPR002500 Phosphoadenosine phosphosulphate reductase AMED_6658 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AMED_6658 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6659 IPR002500 Phosphoadenosine phosphosulphate reductase AMED_6659 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6659 IPR011784 Sulphate adenylyltransferase, small subunit AMED_6660 IPR000795 Transcription factor, GTP-binding domain AMED_6660 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AMED_6660 IPR011779 Sulphate adenylyltransferase, large subunit AMED_6660 IPR009000 Translation protein, beta-barrel domain superfamily AMED_6660 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMED_6660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6660 IPR002891 Adenylyl-sulfate kinase AMED_6660 IPR031157 Tr-type G domain, conserved site AMED_6663 IPR001404 Heat shock protein Hsp90 family AMED_6663 IPR020575 Heat shock protein Hsp90, N-terminal AMED_6663 IPR019805 Heat shock protein Hsp90, conserved site AMED_6663 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6663 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6663 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_6666 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_6666 IPR001753 Enoyl-CoA hydratase/isomerase AMED_6666 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_6666 IPR029045 ClpP/crotonase-like domain superfamily AMED_6667 IPR000468 Barstar (barnase inhibitor) AMED_6667 IPR035905 Barstar-like superfamily AMED_6668 IPR000026 Guanine-specific ribonuclease N1/T1/U2 AMED_6668 IPR016191 Ribonuclease/ribotoxin AMED_6670 IPR020843 Polyketide synthase, enoylreductase domain AMED_6670 IPR036291 NAD(P)-binding domain superfamily AMED_6670 IPR011032 GroES-like superfamily AMED_6670 IPR013149 Alcohol dehydrogenase, C-terminal AMED_6670 IPR013154 Alcohol dehydrogenase, N-terminal AMED_6672 IPR002293 Amino acid/polyamine transporter I AMED_6673 IPR013785 Aldolase-type TIM barrel AMED_6673 IPR004136 Nitronate monooxygenase AMED_6675 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMED_6675 IPR029018 Beta-hexosaminidase-like, domain 2 AMED_6675 IPR017853 Glycoside hydrolase superfamily AMED_6675 IPR015883 Glycoside hydrolase family 20, catalytic domain AMED_6675 IPR025705 Beta-hexosaminidase AMED_6681 IPR005225 Small GTP-binding protein domain AMED_6681 IPR009000 Translation protein, beta-barrel domain superfamily AMED_6681 IPR006297 Elongation factor 4 AMED_6681 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6681 IPR035654 Elongation factor 4, domain IV AMED_6681 IPR013842 GTP-binding protein LepA, C-terminal AMED_6681 IPR038363 LepA, C-terminal domain superfamily AMED_6681 IPR031157 Tr-type G domain, conserved site AMED_6681 IPR000795 Transcription factor, GTP-binding domain AMED_6681 IPR035647 EF-G domain III/V-like AMED_6681 IPR000640 Elongation factor EFG, domain V-like AMED_6682 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6682 IPR004033 UbiE/COQ5 methyltransferase AMED_6682 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_6685 IPR036510 Ribosomal protein S20 superfamily AMED_6685 IPR002583 Ribosomal protein S20 AMED_6687 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_6687 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_6687 IPR004450 Threonine synthase-like AMED_6687 IPR026260 Threonine synthase, bacterial/archaeal AMED_6687 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_6689 IPR004477 ComEC/Rec2-related protein AMED_6689 IPR035681 ComA-like, MBL domain AMED_6689 IPR004797 Competence protein ComEC/Rec2 AMED_6689 IPR025405 Domain of unknown function DUF4131 AMED_6689 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_6689 IPR001279 Metallo-beta-lactamase AMED_6691 IPR003797 DegV AMED_6693 IPR029033 Histidine phosphatase superfamily AMED_6693 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_6693 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site AMED_6694 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMED_6695 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase AMED_6695 IPR004821 Cytidyltransferase-like domain AMED_6695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6696 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6696 IPR018982 RQC domain AMED_6696 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMED_6696 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6696 IPR002121 HRDC domain AMED_6696 IPR010997 HRDC-like superfamily AMED_6696 IPR001650 Helicase, C-terminal AMED_6696 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AMED_6696 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_6696 IPR011545 DEAD/DEAH box helicase domain AMED_6696 IPR004589 DNA helicase, ATP-dependent, RecQ type AMED_6697 IPR004736 MFS transporter, metabolite:H symporter AMED_6697 IPR005829 Sugar transporter, conserved site AMED_6697 IPR020846 Major facilitator superfamily domain AMED_6697 IPR005828 Major facilitator, sugar transporter-like AMED_6697 IPR036259 MFS transporter superfamily AMED_6698 IPR005148 Arginyl tRNA synthetase N-terminal domain AMED_6698 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AMED_6698 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6698 IPR008909 DALR anticodon binding AMED_6698 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_6698 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_6698 IPR001278 Arginine-tRNA ligase AMED_6698 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AMED_6701 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_6701 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_6701 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6701 IPR001647 DNA-binding HTH domain, TetR-type AMED_6701 IPR009057 Homeobox-like domain superfamily AMED_6702 IPR036291 NAD(P)-binding domain superfamily AMED_6702 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6703 IPR011529 Glutamate 5-kinase AMED_6703 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AMED_6703 IPR019797 Glutamate 5-kinase, conserved site AMED_6703 IPR002478 PUA domain AMED_6703 IPR015947 PUA-like superfamily AMED_6703 IPR036974 PUA domain superfamily AMED_6703 IPR036393 Acetylglutamate kinase-like superfamily AMED_6703 IPR001057 Glutamate/acetylglutamate kinase AMED_6703 IPR001048 Aspartate/glutamate/uridylate kinase AMED_6704 IPR015349 GTP-binding protein OBG, C-terminal AMED_6704 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6704 IPR031167 OBG-type guanine nucleotide-binding (G) domain AMED_6704 IPR014100 GTP-binding protein Obg/CgtA AMED_6704 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily AMED_6704 IPR006074 GTP1/OBG, conserved site AMED_6704 IPR006169 GTP1/OBG domain AMED_6704 IPR036726 GTP1/OBG domain superfamily AMED_6704 IPR006073 GTP binding domain AMED_6705 IPR018261 Ribosomal protein L27, conserved site AMED_6705 IPR001684 Ribosomal protein L27 AMED_6706 IPR028909 Ribosomal protein L21-like AMED_6706 IPR001787 Ribosomal protein L21 AMED_6706 IPR018258 Ribosomal protein L21, conserved site AMED_6706 IPR036164 L21-like superfamily AMED_6707 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AMED_6707 IPR004659 Ribonuclease E/G AMED_6707 IPR003029 S1 domain AMED_6707 IPR022967 RNA-binding domain, S1 AMED_6707 IPR004659 Ribonuclease E/G AMED_6707 IPR022967 RNA-binding domain, S1 AMED_6707 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AMED_6707 IPR012340 Nucleic acid-binding, OB-fold AMED_6707 IPR003029 S1 domain AMED_6707 IPR012340 Nucleic acid-binding, OB-fold AMED_6708 IPR034063 Fervidolysin domain AMED_6708 IPR015500 Peptidase S8, subtilisin-related AMED_6708 IPR000209 Peptidase S8/S53 domain AMED_6708 IPR036852 Peptidase S8/S53 domain superfamily AMED_6708 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_6708 IPR022398 Peptidase S8, subtilisin, His-active site AMED_6708 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_6708 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AMED_6708 IPR013783 Immunoglobulin-like fold AMED_6709 IPR013525 ABC-2 type transporter AMED_6709 IPR000412 ABC-2 transporter AMED_6709 IPR005981 ABC-2 type transporter, NodJ AMED_6711 IPR003593 AAA+ ATPase domain AMED_6711 IPR003439 ABC transporter-like AMED_6711 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6711 IPR005978 Nodulation ABC transporter, NodI AMED_6711 IPR015851 ABC transporter, NodI AMED_6711 IPR017871 ABC transporter, conserved site AMED_6714 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AMED_6714 IPR001564 Nucleoside diphosphate kinase AMED_6714 IPR034907 Nucleoside diphosphate kinase-like domain AMED_6716 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_6716 IPR023343 Penicillin amidase type, domain 1 AMED_6716 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase AMED_6718 IPR013221 Mur ligase, central AMED_6718 IPR018109 Folylpolyglutamate synthetase, conserved site AMED_6718 IPR001645 Folylpolyglutamate synthetase AMED_6718 IPR036615 Mur ligase, C-terminal domain superfamily AMED_6718 IPR036565 Mur-like, catalytic domain superfamily AMED_6718 IPR004101 Mur ligase, C-terminal AMED_6719 IPR013216 Methyltransferase type 11 AMED_6719 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6720 IPR037460 Streptomyces scabies esterase-like AMED_6720 IPR036514 SGNH hydrolase superfamily AMED_6720 IPR013830 SGNH hydrolase-type esterase domain AMED_6722 IPR029058 Alpha/Beta hydrolase fold AMED_6722 IPR000073 Alpha/beta hydrolase fold-1 AMED_6722 IPR000639 Epoxide hydrolase-like AMED_6723 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6723 IPR000847 Transcription regulator HTH, LysR AMED_6723 IPR036390 Winged helix DNA-binding domain superfamily AMED_6723 IPR005119 LysR, substrate-binding AMED_6724 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMED_6724 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMED_6724 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AMED_6724 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMED_6724 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_6724 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AMED_6724 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMED_6724 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_6724 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_6724 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AMED_6724 IPR002303 Valine-tRNA ligase AMED_6726 IPR000835 MarR-type HTH domain AMED_6726 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6726 IPR036390 Winged helix DNA-binding domain superfamily AMED_6727 IPR036259 MFS transporter superfamily AMED_6727 IPR020846 Major facilitator superfamily domain AMED_6727 IPR011701 Major facilitator superfamily AMED_6728 IPR037951 YdeP-like, MopB domain AMED_6728 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_6728 IPR006656 Molybdopterin oxidoreductase AMED_6728 IPR010046 Oxidoreductase alpha (molybdopterin) subunit AMED_6728 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain AMED_6728 IPR006657 Molybdopterin dinucleotide-binding domain AMED_6730 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain AMED_6730 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_6733 IPR016193 Cytidine deaminase-like AMED_6733 IPR003786 Sulfur carrier protein FdhD AMED_6734 IPR004294 Carotenoid oxygenase AMED_6739 IPR038366 Zinc finger, ClpX C4-type superfamily AMED_6739 IPR003593 AAA+ ATPase domain AMED_6739 IPR003959 ATPase, AAA-type, core AMED_6739 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6739 IPR004487 Clp protease, ATP-binding subunit ClpX AMED_6739 IPR010603 Zinc finger, ClpX C4-type AMED_6739 IPR019489 Clp ATPase, C-terminal AMED_6740 IPR018215 ClpP, Ser active site AMED_6740 IPR001907 ATP-dependent Clp protease proteolytic subunit AMED_6740 IPR033135 ClpP, histidine active site AMED_6740 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMED_6740 IPR029045 ClpP/crotonase-like domain superfamily AMED_6741 IPR033135 ClpP, histidine active site AMED_6741 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMED_6741 IPR029045 ClpP/crotonase-like domain superfamily AMED_6741 IPR001907 ATP-dependent Clp protease proteolytic subunit AMED_6742 IPR027304 Trigger factor/SurA domain superfamily AMED_6742 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMED_6742 IPR008881 Trigger factor, ribosome-binding, bacterial AMED_6742 IPR037041 Trigger factor, C-terminal domain superfamily AMED_6742 IPR005215 Trigger factor AMED_6742 IPR036611 Trigger factor ribosome-binding domain superfamily AMED_6742 IPR008880 Trigger factor, C-terminal AMED_6744 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_6744 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_6744 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_6744 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_6744 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit AMED_6744 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_6744 IPR012675 Beta-grasp domain superfamily AMED_6744 IPR017938 Riboflavin synthase-like beta-barrel AMED_6744 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_6744 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_6744 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_6746 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_6746 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_6746 IPR005467 Histidine kinase domain AMED_6746 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6746 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6746 IPR003660 HAMP domain AMED_6746 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6747 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMED_6750 IPR036676 PurM-like, C-terminal domain superfamily AMED_6750 IPR010918 PurM-like, C-terminal domain AMED_6750 IPR036921 PurM-like, N-terminal domain superfamily AMED_6750 IPR016188 PurM-like, N-terminal domain AMED_6750 IPR006283 Thiamine-monophosphate kinase AMED_6751 IPR011962 dCTP deaminase AMED_6751 IPR029054 dUTPase-like AMED_6751 IPR036157 dUTPase-like superfamily AMED_6751 IPR033704 dUTPase, trimeric AMED_6759 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMED_6767 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6767 IPR013026 Tetratricopeptide repeat-containing domain AMED_6767 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6767 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6767 IPR005158 Bacterial transcriptional activator domain AMED_6767 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6767 IPR019734 Tetratricopeptide repeat AMED_6767 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6767 IPR002182 NB-ARC AMED_6769 IPR012939 Glycosyl hydrolase family 92 AMED_6769 IPR008928 Six-hairpin glycosidase superfamily AMED_6769 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_6769 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_6769 IPR005887 Alpha-1,2-mannosidase, putative AMED_6770 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_6770 IPR026912 Adenine deaminase C-terminal domain AMED_6770 IPR006680 Amidohydrolase-related AMED_6770 IPR006679 Adenine deaminase AMED_6770 IPR032466 Metal-dependent hydrolase AMED_6772 IPR025302 Domain of unknown function DUF4162 AMED_6772 IPR017871 ABC transporter, conserved site AMED_6772 IPR003439 ABC transporter-like AMED_6772 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6772 IPR003593 AAA+ ATPase domain AMED_6773 IPR009057 Homeobox-like domain superfamily AMED_6773 IPR001647 DNA-binding HTH domain, TetR-type AMED_6773 IPR041484 TetR transcriptional regulator Rv1219c-like, C-terminal domain AMED_6773 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_6775 IPR000600 ROK family AMED_6775 IPR004654 Glucokinase ROK AMED_6776 IPR013022 Xylose isomerase-like, TIM barrel domain AMED_6776 IPR013453 Xylose isomerase, actinobacteria AMED_6776 IPR001998 Xylose isomerase AMED_6776 IPR036237 Xylose isomerase-like superfamily AMED_6779 IPR020846 Major facilitator superfamily domain AMED_6779 IPR036259 MFS transporter superfamily AMED_6779 IPR011701 Major facilitator superfamily AMED_6780 IPR020471 Aldo/keto reductase AMED_6780 IPR018170 Aldo/keto reductase, conserved site AMED_6780 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_6780 IPR023210 NADP-dependent oxidoreductase domain AMED_6785 IPR002818 DJ-1/PfpI AMED_6785 IPR029062 Class I glutamine amidotransferase-like AMED_6785 IPR006286 Deglycase PfpI AMED_6786 IPR014787 Phosphoserine phosphatase RsbU, N-terminal AMED_6786 IPR001932 PPM-type phosphatase domain AMED_6786 IPR036457 PPM-type phosphatase domain superfamily AMED_6786 IPR017944 KaiA/RbsU helical domain superfamily AMED_6787 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_6787 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6787 IPR029151 Periplasmic sensor-like domain superfamily AMED_6787 IPR015387 LuxQ, periplasmic AMED_6787 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_6787 IPR005467 Histidine kinase domain AMED_6787 IPR001789 Signal transduction response regulator, receiver domain AMED_6787 IPR011006 CheY-like superfamily AMED_6787 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6787 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6789 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AMED_6789 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_6792 IPR001387 Cro/C1-type helix-turn-helix domain AMED_6792 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_6796 IPR036390 Winged helix DNA-binding domain superfamily AMED_6796 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6796 IPR000847 Transcription regulator HTH, LysR AMED_6796 IPR005119 LysR, substrate-binding AMED_6798 IPR036291 NAD(P)-binding domain superfamily AMED_6798 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6800 IPR036661 Luciferase-like domain superfamily AMED_6800 IPR011251 Luciferase-like domain AMED_6803 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6803 IPR036390 Winged helix DNA-binding domain superfamily AMED_6803 IPR002577 Helix-turn-helix, HxlR type AMED_6804 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_6804 IPR013785 Aldolase-type TIM barrel AMED_6804 IPR017853 Glycoside hydrolase superfamily AMED_6804 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_6804 IPR013780 Glycosyl hydrolase, all-beta AMED_6804 IPR002241 Glycoside hydrolase, family 27 AMED_6805 IPR032710 NTF2-like domain superfamily AMED_6805 IPR037401 SnoaL-like domain AMED_6806 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_6806 IPR011251 Luciferase-like domain AMED_6806 IPR036661 Luciferase-like domain superfamily AMED_6809 IPR027409 GroEL-like apical domain superfamily AMED_6809 IPR002423 Chaperonin Cpn60/TCP-1 family AMED_6809 IPR001844 Chaperonin Cpn60 AMED_6809 IPR018370 Chaperonin Cpn60, conserved site AMED_6809 IPR027413 GroEL-like equatorial domain superfamily AMED_6809 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMED_6810 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AMED_6810 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AMED_6810 IPR010979 Ribosomal protein S13-like, H2TH AMED_6810 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMED_6810 IPR010663 Zinc finger, FPG/IleRS-type AMED_6810 IPR035937 MutM-like, N-terminal AMED_6810 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMED_6811 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily AMED_6811 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family AMED_6811 IPR011860 Ribose 5-phosphate isomerase B, Actinobacteria-type AMED_6814 IPR036249 Thioredoxin-like superfamily AMED_6814 IPR001853 DSBA-like thioredoxin domain AMED_6815 IPR012778 Peptidase M1, aminopeptidase AMED_6815 IPR024571 ERAP1-like C-terminal domain AMED_6815 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMED_6815 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMED_6815 IPR042097 Aminopeptidase N-like , N-terminal AMED_6817 IPR033437 Protein of unknown function DUF5130 AMED_6821 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMED_6821 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMED_6821 IPR010920 LSM domain superfamily AMED_6821 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMED_6821 IPR006685 Mechanosensitive ion channel MscS AMED_6822 IPR001486 Truncated hemoglobin AMED_6822 IPR012292 Globin/Protoglobin AMED_6822 IPR019795 Globin, bacterial-like, conserved site AMED_6822 IPR009050 Globin-like superfamily AMED_6823 IPR017853 Glycoside hydrolase superfamily AMED_6823 IPR013780 Glycosyl hydrolase, all-beta AMED_6823 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_6827 IPR007780 NAD-glutamate dehydrogenase, bacteria AMED_6827 IPR036291 NAD(P)-binding domain superfamily AMED_6827 IPR028971 NAD-glutamate dehydrogenase AMED_6829 IPR032781 ABC-transporter extension domain AMED_6829 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6829 IPR022374 Energy-dependent translational throttle protein EttA AMED_6829 IPR003439 ABC transporter-like AMED_6829 IPR003593 AAA+ ATPase domain AMED_6829 IPR017871 ABC transporter, conserved site AMED_6830 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related AMED_6830 IPR008457 Copper resistance protein D AMED_6833 IPR011701 Major facilitator superfamily AMED_6833 IPR036259 MFS transporter superfamily AMED_6833 IPR020846 Major facilitator superfamily domain AMED_6836 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_6836 IPR005814 Aminotransferase class-III AMED_6836 IPR015424 Pyridoxal phosphate-dependent transferase AMED_6836 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_6837 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_6837 IPR012132 Glucose-methanol-choline oxidoreductase AMED_6837 IPR027424 Glucose Oxidase, domain 2 AMED_6837 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6837 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_6841 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_6841 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_6841 IPR012132 Glucose-methanol-choline oxidoreductase AMED_6841 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6841 IPR027424 Glucose Oxidase, domain 2 AMED_6844 IPR013766 Thioredoxin domain AMED_6844 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMED_6844 IPR036249 Thioredoxin-like superfamily AMED_6844 IPR024706 Peroxiredoxin, AhpC-type AMED_6848 IPR015590 Aldehyde dehydrogenase domain AMED_6848 IPR016161 Aldehyde/histidinol dehydrogenase AMED_6848 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_6848 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_6848 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_6849 IPR011701 Major facilitator superfamily AMED_6849 IPR020846 Major facilitator superfamily domain AMED_6849 IPR036259 MFS transporter superfamily AMED_6849 IPR004638 Drug resistance transporter EmrB-like AMED_6850 IPR029058 Alpha/Beta hydrolase fold AMED_6850 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_6850 IPR000639 Epoxide hydrolase-like AMED_6850 IPR010497 Epoxide hydrolase, N-terminal AMED_6850 IPR016292 Epoxide hydrolase AMED_6854 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase AMED_6854 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6854 IPR002938 FAD-binding domain AMED_6859 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AMED_6859 IPR029045 ClpP/crotonase-like domain superfamily AMED_6859 IPR034733 Acetyl-CoA carboxylase AMED_6859 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMED_6859 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMED_6861 IPR005886 UDP-glucose 4-epimerase AMED_6861 IPR016040 NAD(P)-binding domain AMED_6861 IPR036291 NAD(P)-binding domain superfamily AMED_6862 IPR012349 FMN-binding split barrel AMED_6862 IPR002563 Flavin reductase like domain AMED_6864 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_6864 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_6864 IPR013968 Polyketide synthase, ketoreductase domain AMED_6864 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_6864 IPR009081 Phosphopantetheine binding ACP domain AMED_6864 IPR016039 Thiolase-like AMED_6864 IPR036736 ACP-like superfamily AMED_6864 IPR014043 Acyl transferase AMED_6864 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_6864 IPR018201 Beta-ketoacyl synthase, active site AMED_6864 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_6864 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_6864 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_6864 IPR036291 NAD(P)-binding domain superfamily AMED_6865 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_6865 IPR013917 tRNA wybutosine-synthesis AMED_6865 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMED_6865 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain AMED_6865 IPR017518 Conserved hypothetical protein CHP03084 AMED_6867 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6867 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_6869 IPR002401 Cytochrome P450, E-class, group I AMED_6869 IPR017972 Cytochrome P450, conserved site AMED_6869 IPR036396 Cytochrome P450 superfamily AMED_6869 IPR001128 Cytochrome P450 AMED_6874 IPR020449 Transcription regulator HTH, AraC- type AMED_6874 IPR018060 DNA binding HTH domain, AraC-type AMED_6874 IPR018062 HTH domain AraC-type, conserved site AMED_6874 IPR009057 Homeobox-like domain superfamily AMED_6874 IPR029062 Class I glutamine amidotransferase-like AMED_6876 IPR002577 Helix-turn-helix, HxlR type AMED_6876 IPR036390 Winged helix DNA-binding domain superfamily AMED_6876 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6877 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6877 IPR007627 RNA polymerase sigma-70 region 2 AMED_6877 IPR014284 RNA polymerase sigma-70 like domain AMED_6877 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6877 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_6877 IPR013325 RNA polymerase sigma factor, region 2 AMED_6877 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_6878 IPR011008 Dimeric alpha-beta barrel AMED_6878 IPR005545 YCII-related AMED_6880 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMED_6880 IPR006070 YrdC-like domain AMED_6883 IPR000792 Transcription regulator LuxR, C-terminal AMED_6883 IPR011006 CheY-like superfamily AMED_6883 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6883 IPR001789 Signal transduction response regulator, receiver domain AMED_6885 IPR018062 HTH domain AraC-type, conserved site AMED_6885 IPR003313 AraC-type arabinose-binding/dimerisation domain AMED_6885 IPR009057 Homeobox-like domain superfamily AMED_6885 IPR037923 Transcription regulator HTH-like AMED_6885 IPR018060 DNA binding HTH domain, AraC-type AMED_6885 IPR014710 RmlC-like jelly roll fold AMED_6885 IPR020449 Transcription regulator HTH, AraC- type AMED_6886 IPR011006 CheY-like superfamily AMED_6886 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6886 IPR000792 Transcription regulator LuxR, C-terminal AMED_6886 IPR001789 Signal transduction response regulator, receiver domain AMED_6886 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6887 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6887 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6887 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_6890 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6890 IPR036390 Winged helix DNA-binding domain superfamily AMED_6890 IPR011991 ArsR-like helix-turn-helix domain AMED_6890 IPR002577 Helix-turn-helix, HxlR type AMED_6896 IPR038390 Metal-sensitive transcriptional repressor superfamily AMED_6896 IPR003735 Metal-sensitive transcriptional repressor AMED_6897 IPR008250 P-type ATPase, A domain superfamily AMED_6897 IPR001757 P-type ATPase AMED_6897 IPR017969 Heavy-metal-associated, conserved site AMED_6897 IPR023214 HAD superfamily AMED_6897 IPR027256 P-type ATPase, subfamily IB AMED_6897 IPR036163 Heavy metal-associated domain superfamily AMED_6897 IPR006121 Heavy metal-associated domain, HMA AMED_6897 IPR023298 P-type ATPase, transmembrane domain superfamily AMED_6897 IPR018303 P-type ATPase, phosphorylation site AMED_6897 IPR023299 P-type ATPase, cytoplasmic domain N AMED_6897 IPR000579 Cation-transporting P-type ATPase A/B AMED_6897 IPR036412 HAD-like superfamily AMED_6899 IPR000878 Tetrapyrrole methylase AMED_6899 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_6899 IPR014776 Tetrapyrrole methylase, subdomain 2 AMED_6899 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase AMED_6899 IPR035996 Tetrapyrrole methylase superfamily AMED_6900 IPR000639 Epoxide hydrolase-like AMED_6900 IPR000073 Alpha/beta hydrolase fold-1 AMED_6900 IPR029058 Alpha/Beta hydrolase fold AMED_6901 IPR036291 NAD(P)-binding domain superfamily AMED_6901 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6901 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_6904 IPR020050 FO synthase, subunit 2 AMED_6904 IPR007197 Radical SAM AMED_6904 IPR013785 Aldolase-type TIM barrel AMED_6904 IPR034405 F420, menaquinone cofactor biosynthesis AMED_6904 IPR019939 CofG family AMED_6904 IPR019940 CofH family AMED_6904 IPR006638 Elp3/MiaB/NifB AMED_6909 IPR013094 Alpha/beta hydrolase fold-3 AMED_6909 IPR029058 Alpha/Beta hydrolase fold AMED_6909 IPR002168 Lipase, GDXG, putative histidine active site AMED_6909 IPR033140 Lipase, GDXG, putative serine active site AMED_6913 IPR039420 Transcriptional regulatory protein WalR-like AMED_6913 IPR011006 CheY-like superfamily AMED_6913 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6913 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6913 IPR001789 Signal transduction response regulator, receiver domain AMED_6914 IPR005467 Histidine kinase domain AMED_6914 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6914 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_6914 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_6914 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6914 IPR003660 HAMP domain AMED_6914 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6916 IPR028082 Periplasmic binding protein-like I AMED_6916 IPR000843 LacI-type HTH domain AMED_6916 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_6917 IPR006059 Bacterial extracellular solute-binding protein AMED_6918 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_6918 IPR035906 MetI-like superfamily AMED_6919 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE AMED_6919 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_6919 IPR035906 MetI-like superfamily AMED_6920 IPR017853 Glycoside hydrolase superfamily AMED_6920 IPR013780 Glycosyl hydrolase, all-beta AMED_6920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AMED_6921 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6921 IPR005158 Bacterial transcriptional activator domain AMED_6921 IPR002182 NB-ARC AMED_6921 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6921 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6921 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6921 IPR019734 Tetratricopeptide repeat AMED_6921 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6923 IPR033738 Asparagine synthase, N-terminal domain AMED_6923 IPR017932 Glutamine amidotransferase type 2 domain AMED_6923 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_6923 IPR006426 Asparagine synthase, glutamine-hydrolyzing AMED_6923 IPR001962 Asparagine synthase AMED_6925 IPR000600 ROK family AMED_6925 IPR004654 Glucokinase ROK AMED_6929 IPR036390 Winged helix DNA-binding domain superfamily AMED_6929 IPR005119 LysR, substrate-binding AMED_6929 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6929 IPR000847 Transcription regulator HTH, LysR AMED_6929 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AMED_6931 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_6931 IPR036291 NAD(P)-binding domain superfamily AMED_6931 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6934 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMED_6934 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_6934 IPR006258 Dihydrolipoamide dehydrogenase AMED_6934 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMED_6934 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMED_6934 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6934 IPR023753 FAD/NAD(P)-binding domain AMED_6937 IPR000843 LacI-type HTH domain AMED_6937 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_6937 IPR028082 Periplasmic binding protein-like I AMED_6941 IPR001789 Signal transduction response regulator, receiver domain AMED_6941 IPR011006 CheY-like superfamily AMED_6941 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6941 IPR039420 Transcriptional regulatory protein WalR-like AMED_6941 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_6942 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_6942 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_6942 IPR005467 Histidine kinase domain AMED_6942 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_6942 IPR003594 Histidine kinase/HSP90-like ATPase AMED_6942 IPR003660 HAMP domain AMED_6942 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_6944 IPR002293 Amino acid/polyamine transporter I AMED_6944 IPR004758 Amino acid transporter AMED_6945 IPR001110 Uncharacterised protein family UPF0012, conserved site AMED_6945 IPR003010 Carbon-nitrogen hydrolase AMED_6945 IPR036526 Carbon-nitrogen hydrolase superfamily AMED_6946 IPR002937 Amine oxidase AMED_6946 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6949 IPR000073 Alpha/beta hydrolase fold-1 AMED_6949 IPR029058 Alpha/Beta hydrolase fold AMED_6951 IPR025736 PucR C-terminal helix-turn-helix domain AMED_6951 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_6951 IPR041522 CdaR, GGDEF-like domain AMED_6951 IPR008599 Putative sugar diacid recognition AMED_6955 IPR020616 Thiolase, N-terminal AMED_6955 IPR020613 Thiolase, conserved site AMED_6955 IPR012793 Beta-ketoadipyl CoA thiolase AMED_6955 IPR002155 Thiolase AMED_6955 IPR020617 Thiolase, C-terminal AMED_6955 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_6955 IPR016039 Thiolase-like AMED_6955 IPR020610 Thiolase, active site AMED_6956 IPR011963 2,3-dihydroxybenzoate-AMP ligase AMED_6956 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6956 IPR020845 AMP-binding, conserved site AMED_6956 IPR000873 AMP-dependent synthetase/ligase AMED_6957 IPR004294 Carotenoid oxygenase AMED_6958 IPR002577 Helix-turn-helix, HxlR type AMED_6958 IPR011991 ArsR-like helix-turn-helix domain AMED_6958 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6958 IPR036390 Winged helix DNA-binding domain superfamily AMED_6960 IPR001279 Metallo-beta-lactamase AMED_6960 IPR022877 Protein of unknown funcion UPF0173 AMED_6960 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_6961 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain AMED_6961 IPR005119 LysR, substrate-binding AMED_6961 IPR000847 Transcription regulator HTH, LysR AMED_6961 IPR036390 Winged helix DNA-binding domain superfamily AMED_6961 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6962 IPR012338 Beta-lactamase/transpeptidase-like AMED_6963 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal AMED_6963 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AMED_6963 IPR033524 Leu/Phe/Val dehydrogenases active site AMED_6963 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AMED_6963 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AMED_6963 IPR036291 NAD(P)-binding domain superfamily AMED_6965 IPR004981 Tryptophan 2,3-dioxygenase AMED_6965 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like AMED_6967 IPR003785 Creatininase/formamide hydrolase AMED_6967 IPR024087 Creatininase-like superfamily AMED_6967 IPR031034 Creatinine amidohydrolase AMED_6968 IPR000873 AMP-dependent synthetase/ligase AMED_6968 IPR011957 Benzoate-CoA ligase family AMED_6968 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6969 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_6969 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6969 IPR036291 NAD(P)-binding domain superfamily AMED_6969 IPR011283 Acetoacetyl-CoA reductase AMED_6970 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_6970 IPR001753 Enoyl-CoA hydratase/isomerase AMED_6970 IPR029045 ClpP/crotonase-like domain superfamily AMED_6970 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB AMED_6978 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_6978 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_6978 IPR036291 NAD(P)-binding domain superfamily AMED_6980 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6980 IPR000792 Transcription regulator LuxR, C-terminal AMED_6980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6980 IPR016032 Signal transduction response regulator, C-terminal effector AMED_6980 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_6982 IPR025110 AMP-binding enzyme, C-terminal domain AMED_6982 IPR000873 AMP-dependent synthetase/ligase AMED_6982 IPR020845 AMP-binding, conserved site AMED_6982 IPR042099 AMP-dependent synthetase-like superfamily AMED_6982 IPR010192 2-succinylbenzoate--CoA ligase AMED_6985 IPR010222 RNA helicase HrpA AMED_6985 IPR011709 Domain of unknown function DUF1605 AMED_6985 IPR001650 Helicase, C-terminal AMED_6985 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_6985 IPR007502 Helicase-associated domain AMED_6985 IPR011545 DEAD/DEAH box helicase domain AMED_6985 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_6985 IPR024590 RNA helicase HrpA, C-terminal AMED_6985 IPR003593 AAA+ ATPase domain AMED_6987 IPR013785 Aldolase-type TIM barrel AMED_6987 IPR000262 FMN-dependent dehydrogenase AMED_6987 IPR037396 FMN hydroxy acid dehydrogenase domain AMED_6987 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AMED_6987 IPR037350 Lactate 2-monooxygenase, FMN-binding domain AMED_6987 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AMED_6988 IPR036291 NAD(P)-binding domain superfamily AMED_6988 IPR005097 Saccharopine dehydrogenase, NADP binding domain AMED_6989 IPR020946 Flavin monooxygenase-like AMED_6989 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_6991 IPR023346 Lysozyme-like domain superfamily AMED_6991 IPR000400 Glycoside hydrolase, family 46 AMED_6991 IPR023099 Glycoside hydrolase, family 46, N-terminal AMED_6992 IPR010996 DNA polymerase beta-like, N-terminal domain AMED_6992 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMED_6992 IPR002054 DNA-directed DNA polymerase X AMED_6992 IPR004013 PHP domain AMED_6992 IPR027421 DNA polymerase lambda lyase domain superfamily AMED_6992 IPR022311 Uncharacterised conserved protein UCP005047, YshC AMED_6992 IPR016195 Polymerase/histidinol phosphatase-like AMED_6992 IPR029398 DNA polymerase beta, thumb domain AMED_6992 IPR037160 DNA polymerase, thumb domain superfamily AMED_6992 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMED_6994 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_6994 IPR000524 Transcription regulator HTH, GntR AMED_6994 IPR000485 AsnC-type HTH domain AMED_6994 IPR011711 GntR, C-terminal AMED_6994 IPR036390 Winged helix DNA-binding domain superfamily AMED_6994 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_6995 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMED_6995 IPR037237 IlvD/EDD, N-terminal domain AMED_6995 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMED_6995 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMED_6999 IPR029787 Nucleotide cyclase AMED_6999 IPR000160 GGDEF domain AMED_6999 IPR012292 Globin/Protoglobin AMED_6999 IPR039435 Diguanylate cyclase DosC, globin sensor domain AMED_6999 IPR009050 Globin-like superfamily AMED_7001 IPR006653 Tryptophan synthase, beta chain, conserved site AMED_7001 IPR006654 Tryptophan synthase, beta chain AMED_7001 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_7001 IPR006316 Tryptophan synthase, beta chain-like AMED_7001 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_7001 IPR023026 Tryptophan synthase beta chain/beta chain-like AMED_7002 IPR002925 Dienelactone hydrolase AMED_7002 IPR029058 Alpha/Beta hydrolase fold AMED_7004 IPR007627 RNA polymerase sigma-70 region 2 AMED_7004 IPR014284 RNA polymerase sigma-70 like domain AMED_7004 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7004 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_7004 IPR013325 RNA polymerase sigma factor, region 2 AMED_7004 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7004 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_7008 IPR006196 RNA-binding domain, S1, IF1 type AMED_7008 IPR012340 Nucleic acid-binding, OB-fold AMED_7008 IPR022967 RNA-binding domain, S1 AMED_7008 IPR004368 Translation initiation factor IF-1 AMED_7011 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7011 IPR004839 Aminotransferase, class I/classII AMED_7011 IPR036390 Winged helix DNA-binding domain superfamily AMED_7011 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7011 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7011 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7011 IPR000524 Transcription regulator HTH, GntR AMED_7013 IPR010979 Ribosomal protein S13-like, H2TH AMED_7013 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMED_7013 IPR010663 Zinc finger, FPG/IleRS-type AMED_7013 IPR020629 Formamidopyrimidine-DNA glycosylase AMED_7013 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AMED_7013 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMED_7013 IPR035937 MutM-like, N-terminal AMED_7014 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_7014 IPR017810 Mycothiol biosynthesis protein, MshB AMED_7014 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_7015 IPR001303 Class II aldolase/adducin N-terminal AMED_7015 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMED_7015 IPR000649 Initiation factor 2B-related AMED_7015 IPR037171 NagB/RpiA transferase-like AMED_7015 IPR005251 Methylthioribose-1-phosphate isomerase AMED_7015 IPR017714 Methylthioribulose-1-phosphate dehydratase AMED_7015 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal AMED_7015 IPR011559 Initiation factor 2B alpha/beta/delta AMED_7018 IPR036396 Cytochrome P450 superfamily AMED_7018 IPR017972 Cytochrome P450, conserved site AMED_7018 IPR001128 Cytochrome P450 AMED_7018 IPR002397 Cytochrome P450, B-class AMED_7019 IPR018309 Transcription regulator PadR, C-terminal AMED_7019 IPR005149 Transcription regulator PadR, N-terminal AMED_7019 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7019 IPR036390 Winged helix DNA-binding domain superfamily AMED_7020 IPR036396 Cytochrome P450 superfamily AMED_7020 IPR017972 Cytochrome P450, conserved site AMED_7020 IPR002397 Cytochrome P450, B-class AMED_7020 IPR001128 Cytochrome P450 AMED_7021 IPR029061 Thiamin diphosphate-binding fold AMED_7021 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_7021 IPR005474 Transketolase, N-terminal AMED_7022 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal AMED_7022 IPR009057 Homeobox-like domain superfamily AMED_7022 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7022 IPR001647 DNA-binding HTH domain, TetR-type AMED_7023 IPR006094 FAD linked oxidase, N-terminal AMED_7023 IPR009051 Alpha-helical ferredoxin AMED_7023 IPR016164 FAD-linked oxidase-like, C-terminal AMED_7023 IPR004113 FAD-linked oxidase, C-terminal AMED_7023 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_7023 IPR036318 FAD-binding, type PCMH-like superfamily AMED_7023 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_7023 IPR016166 FAD-binding domain, PCMH-type AMED_7025 IPR016032 Signal transduction response regulator, C-terminal effector AMED_7025 IPR011006 CheY-like superfamily AMED_7025 IPR001789 Signal transduction response regulator, receiver domain AMED_7025 IPR000792 Transcription regulator LuxR, C-terminal AMED_7025 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7027 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMED_7027 IPR003439 ABC transporter-like AMED_7027 IPR017871 ABC transporter, conserved site AMED_7027 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7027 IPR003593 AAA+ ATPase domain AMED_7028 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7028 IPR003593 AAA+ ATPase domain AMED_7028 IPR003439 ABC transporter-like AMED_7028 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMED_7028 IPR017871 ABC transporter, conserved site AMED_7029 IPR001851 ABC transporter, permease AMED_7030 IPR001851 ABC transporter, permease AMED_7033 IPR000182 GNAT domain AMED_7033 IPR016181 Acyl-CoA N-acyltransferase AMED_7034 IPR008928 Six-hairpin glycosidase superfamily AMED_7034 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_7034 IPR005887 Alpha-1,2-mannosidase, putative AMED_7034 IPR012939 Glycosyl hydrolase family 92 AMED_7034 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_7035 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AMED_7035 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AMED_7035 IPR001498 Impact, N-terminal AMED_7035 IPR036956 Impact, N-terminal domain superfamily AMED_7035 IPR035647 EF-G domain III/V-like AMED_7035 IPR015796 Impact family, bacterial/archaeal AMED_7035 IPR023582 Impact family AMED_7035 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_7036 IPR017932 Glutamine amidotransferase type 2 domain AMED_7036 IPR002932 Glutamate synthase domain AMED_7036 IPR013785 Aldolase-type TIM barrel AMED_7036 IPR002489 Glutamate synthase, alpha subunit, C-terminal AMED_7036 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AMED_7036 IPR006982 Glutamate synthase, central-N AMED_7036 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_7037 IPR009051 Alpha-helical ferredoxin AMED_7037 IPR028261 Dihydroprymidine dehydrogenase domain II AMED_7037 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 AMED_7037 IPR023753 FAD/NAD(P)-binding domain AMED_7037 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7038 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase AMED_7038 IPR036291 NAD(P)-binding domain superfamily AMED_7039 IPR001647 DNA-binding HTH domain, TetR-type AMED_7039 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_7039 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7039 IPR009057 Homeobox-like domain superfamily AMED_7040 IPR006314 Dyp-type peroxidase AMED_7040 IPR011008 Dimeric alpha-beta barrel AMED_7041 IPR000600 ROK family AMED_7041 IPR023945 N-acetylmannosamine kinase, bacterial AMED_7044 IPR029062 Class I glutamine amidotransferase-like AMED_7044 IPR004459 Cobyric acid synthase CobQ AMED_7044 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 AMED_7044 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMED_7044 IPR017929 CobB/CobQ glutamine amidotransferase AMED_7044 IPR011698 CobB/CobQ-like glutamine amidotransferase AMED_7044 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7045 IPR004485 Cobalamin biosynthesis CobD/CbiB AMED_7046 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase AMED_7046 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7047 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal AMED_7047 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic AMED_7047 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily AMED_7047 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AMED_7048 IPR003805 Adenosylcobinamide-GDP ribazoletransferase AMED_7049 IPR036390 Winged helix DNA-binding domain superfamily AMED_7049 IPR028349 Protein PafC AMED_7049 IPR013196 Helix-turn-helix, type 11 AMED_7049 IPR026881 WYL domain AMED_7049 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7049 IPR001034 DeoR-type HTH domain AMED_7051 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMED_7051 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7051 IPR004839 Aminotransferase, class I/classII AMED_7051 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7051 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7052 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMED_7052 IPR017929 CobB/CobQ glutamine amidotransferase AMED_7052 IPR011698 CobB/CobQ-like glutamine amidotransferase AMED_7052 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7052 IPR029062 Class I glutamine amidotransferase-like AMED_7052 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA AMED_7054 IPR036465 von Willebrand factor A-like domain superfamily AMED_7054 IPR002035 von Willebrand factor, type A AMED_7054 IPR011704 ATPase, dynein-related, AAA domain AMED_7054 IPR003593 AAA+ ATPase domain AMED_7054 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7054 IPR041628 ChlI/MoxR, AAA lid domain AMED_7054 IPR041702 Magnesium-chelatase BchD/ChlD, VWA domain AMED_7055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7055 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit AMED_7055 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase AMED_7055 IPR035996 Tetrapyrrole methylase superfamily AMED_7055 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase AMED_7055 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_7055 IPR000878 Tetrapyrrole methylase AMED_7056 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AMED_7056 IPR014776 Tetrapyrrole methylase, subdomain 2 AMED_7056 IPR035996 Tetrapyrrole methylase superfamily AMED_7056 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_7056 IPR000878 Tetrapyrrole methylase AMED_7056 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase AMED_7057 IPR000683 Oxidoreductase, N-terminal AMED_7057 IPR036291 NAD(P)-binding domain superfamily AMED_7057 IPR004104 Oxidoreductase, C-terminal AMED_7058 IPR003723 Precorrin-6x reductase AMED_7059 IPR029479 Nitroreductase AMED_7059 IPR012825 5,6-dimethylbenzimidazole synthase BluB AMED_7059 IPR000415 Nitroreductase-like AMED_7060 IPR032731 Arabinosyltransferase, C-terminal AMED_7060 IPR007680 Arabinofuranosyltransferase, central domain AMED_7060 IPR040920 Arabinosyltransferas, concanavalin like domain AMED_7060 IPR027451 Arabinofuranosyltransferase, domain 1 AMED_7061 IPR035996 Tetrapyrrole methylase superfamily AMED_7061 IPR014776 Tetrapyrrole methylase, subdomain 2 AMED_7061 IPR006363 Precorrin-3B C17-methyltransferase domain AMED_7061 IPR012382 Precorrin-2 C(20)-methyltransferase AMED_7061 IPR006364 Precorrin-2 C(20)-methyltransferase domain AMED_7061 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_7061 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AMED_7061 IPR000878 Tetrapyrrole methylase AMED_7062 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC AMED_7062 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily AMED_7065 IPR017871 ABC transporter, conserved site AMED_7065 IPR003439 ABC transporter-like AMED_7065 IPR003593 AAA+ ATPase domain AMED_7065 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7065 IPR005978 Nodulation ABC transporter, NodI AMED_7065 IPR015851 ABC transporter, NodI AMED_7067 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_7067 IPR001387 Cro/C1-type helix-turn-helix domain AMED_7069 IPR003672 CobN/magnesium chelatase AMED_7069 IPR011953 Cobaltochelatase, CobN subunit AMED_7070 IPR017853 Glycoside hydrolase superfamily AMED_7071 IPR024072 Dihydrofolate reductase-like domain superfamily AMED_7071 IPR016193 Cytidine deaminase-like AMED_7071 IPR004794 Riboflavin biosynthesis protein RibD AMED_7071 IPR011549 Riboflavin-specific deaminase, C-terminal AMED_7071 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AMED_7071 IPR016192 APOBEC/CMP deaminase, zinc-binding AMED_7071 IPR002125 Cytidine and deoxycytidylate deaminase domain AMED_7074 IPR016161 Aldehyde/histidinol dehydrogenase AMED_7074 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_7074 IPR012134 Glutamate-5-semialdehyde dehydrogenase AMED_7074 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AMED_7074 IPR015590 Aldehyde dehydrogenase domain AMED_7074 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_7074 IPR000965 GPR domain AMED_7079 IPR001940 Peptidase S1C AMED_7079 IPR036034 PDZ superfamily AMED_7079 IPR001478 PDZ domain AMED_7079 IPR009003 Peptidase S1, PA clan AMED_7081 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7081 IPR033186 Helicase HerA-like C-terminal AMED_7082 IPR013520 Exonuclease, RNase T/DNA polymerase III AMED_7082 IPR022894 Oligoribonuclease AMED_7082 IPR012337 Ribonuclease H-like superfamily AMED_7082 IPR036397 Ribonuclease H superfamily AMED_7083 IPR020846 Major facilitator superfamily domain AMED_7083 IPR005828 Major facilitator, sugar transporter-like AMED_7083 IPR036292 Proline/betaine transporter ProP, C-terminal AMED_7083 IPR005829 Sugar transporter, conserved site AMED_7083 IPR015041 Osmosensory transporter coiled coil AMED_7083 IPR004736 MFS transporter, metabolite:H symporter AMED_7083 IPR036259 MFS transporter superfamily AMED_7084 IPR005490 L,D-transpeptidase catalytic domain AMED_7084 IPR041280 Bacterial Ig domain, transpeptidase-associated AMED_7084 IPR038063 L,D-transpeptidase catalytic domain-like AMED_7085 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_7085 IPR002104 Integrase, catalytic domain AMED_7085 IPR013762 Integrase-like, catalytic domain superfamily AMED_7085 IPR023009 Tyrosine recombinase XerC/XerD AMED_7085 IPR010998 Integrase/recombinase, N-terminal AMED_7085 IPR004107 Integrase, SAM-like, N-terminal AMED_7087 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7087 IPR001091 Restriction/modification DNA-methylase AMED_7087 IPR002941 DNA methylase N-4/N-6 AMED_7087 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site AMED_7088 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7088 IPR002941 DNA methylase N-4/N-6 AMED_7088 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site AMED_7088 IPR001091 Restriction/modification DNA-methylase AMED_7101 IPR002938 FAD-binding domain AMED_7101 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7115 IPR020476 NUDIX hydrolase AMED_7115 IPR020084 NUDIX hydrolase, conserved site AMED_7115 IPR000086 NUDIX hydrolase domain AMED_7115 IPR015797 NUDIX hydrolase-like domain superfamily AMED_7120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7120 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7120 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_7120 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7120 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7121 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7121 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7121 IPR020843 Polyketide synthase, enoylreductase domain AMED_7121 IPR036291 NAD(P)-binding domain superfamily AMED_7121 IPR011032 GroES-like superfamily AMED_7122 IPR029061 Thiamin diphosphate-binding fold AMED_7122 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_7122 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_7122 IPR033248 Transketolase, C-terminal domain AMED_7123 IPR025110 AMP-binding enzyme, C-terminal domain AMED_7123 IPR042099 AMP-dependent synthetase-like superfamily AMED_7123 IPR000873 AMP-dependent synthetase/ligase AMED_7123 IPR020459 AMP-binding AMED_7123 IPR020845 AMP-binding, conserved site AMED_7124 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7124 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7124 IPR036291 NAD(P)-binding domain superfamily AMED_7125 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7125 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7125 IPR029045 ClpP/crotonase-like domain superfamily AMED_7125 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7129 IPR011701 Major facilitator superfamily AMED_7129 IPR020846 Major facilitator superfamily domain AMED_7129 IPR036259 MFS transporter superfamily AMED_7131 IPR011206 Citrate lyase beta subunit-like AMED_7131 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_7131 IPR040442 Pyruvate kinase-like domain superfamily AMED_7131 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AMED_7132 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A AMED_7132 IPR036661 Luciferase-like domain superfamily AMED_7132 IPR011251 Luciferase-like domain AMED_7133 IPR011711 GntR, C-terminal AMED_7133 IPR036390 Winged helix DNA-binding domain superfamily AMED_7133 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7133 IPR000524 Transcription regulator HTH, GntR AMED_7133 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_7134 IPR016161 Aldehyde/histidinol dehydrogenase AMED_7134 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_7134 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_7134 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_7134 IPR015590 Aldehyde dehydrogenase domain AMED_7134 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_7135 IPR023606 CoA-transferase family III domain superfamily AMED_7135 IPR003673 CoA-transferase family III AMED_7138 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_7138 IPR036291 NAD(P)-binding domain superfamily AMED_7138 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7138 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7139 IPR023753 FAD/NAD(P)-binding domain AMED_7139 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7141 IPR036396 Cytochrome P450 superfamily AMED_7141 IPR017972 Cytochrome P450, conserved site AMED_7141 IPR001128 Cytochrome P450 AMED_7141 IPR002397 Cytochrome P450, B-class AMED_7142 IPR001080 3Fe-4S ferredoxin AMED_7142 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_7143 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7143 IPR028202 Reductase, C-terminal AMED_7143 IPR023753 FAD/NAD(P)-binding domain AMED_7143 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_7144 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7144 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7144 IPR011283 Acetoacetyl-CoA reductase AMED_7144 IPR036291 NAD(P)-binding domain superfamily AMED_7145 IPR003779 Carboxymuconolactone decarboxylase-like AMED_7145 IPR029032 AhpD-like AMED_7145 IPR012788 4-carboxymuconolactone decarboxylase AMED_7147 IPR001647 DNA-binding HTH domain, TetR-type AMED_7147 IPR009057 Homeobox-like domain superfamily AMED_7147 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7149 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7149 IPR020843 Polyketide synthase, enoylreductase domain AMED_7149 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7149 IPR011032 GroES-like superfamily AMED_7149 IPR036291 NAD(P)-binding domain superfamily AMED_7149 IPR014188 Acrylyl-CoA reductase AcuI AMED_7154 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7154 IPR017871 ABC transporter, conserved site AMED_7154 IPR003439 ABC transporter-like AMED_7154 IPR003593 AAA+ ATPase domain AMED_7154 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMED_7155 IPR003593 AAA+ ATPase domain AMED_7155 IPR017871 ABC transporter, conserved site AMED_7155 IPR003439 ABC transporter-like AMED_7155 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7155 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMED_7158 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7158 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7158 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7158 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7158 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7158 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7159 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7159 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7159 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7159 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7159 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7159 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7160 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7160 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7160 IPR036291 NAD(P)-binding domain superfamily AMED_7161 IPR011711 GntR, C-terminal AMED_7161 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_7161 IPR036390 Winged helix DNA-binding domain superfamily AMED_7161 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7161 IPR000524 Transcription regulator HTH, GntR AMED_7163 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7163 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7163 IPR036291 NAD(P)-binding domain superfamily AMED_7163 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_7164 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7164 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7164 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_7164 IPR014043 Acyl transferase AMED_7164 IPR036736 ACP-like superfamily AMED_7164 IPR001227 Acyl transferase domain superfamily AMED_7164 IPR018201 Beta-ketoacyl synthase, active site AMED_7164 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_7164 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_7164 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_7164 IPR036291 NAD(P)-binding domain superfamily AMED_7164 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_7164 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_7164 IPR020807 Polyketide synthase, dehydratase domain AMED_7164 IPR011032 GroES-like superfamily AMED_7164 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_7164 IPR020843 Polyketide synthase, enoylreductase domain AMED_7164 IPR013968 Polyketide synthase, ketoreductase domain AMED_7164 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_7164 IPR009081 Phosphopantetheine binding ACP domain AMED_7164 IPR016039 Thiolase-like AMED_7165 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7165 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7165 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7165 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7165 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7165 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7166 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7166 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7166 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7166 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7166 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7166 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7168 IPR002397 Cytochrome P450, B-class AMED_7168 IPR017972 Cytochrome P450, conserved site AMED_7168 IPR036396 Cytochrome P450 superfamily AMED_7168 IPR001128 Cytochrome P450 AMED_7169 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7169 IPR029045 ClpP/crotonase-like domain superfamily AMED_7169 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7169 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7169 IPR022852 Carnitinyl-CoA dehydratase AMED_7171 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7171 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7171 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7171 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7171 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7171 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7172 IPR036291 NAD(P)-binding domain superfamily AMED_7172 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7172 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7174 IPR003673 CoA-transferase family III AMED_7174 IPR023606 CoA-transferase family III domain superfamily AMED_7177 IPR023985 Mycofactocin-dependent oxidoreductase AMED_7177 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7177 IPR036291 NAD(P)-binding domain superfamily AMED_7182 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMED_7182 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMED_7182 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7183 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7183 IPR029016 GAF-like domain superfamily AMED_7183 IPR036390 Winged helix DNA-binding domain superfamily AMED_7183 IPR005471 Transcription regulator IclR, N-terminal AMED_7183 IPR014757 Transcription regulator IclR, C-terminal AMED_7184 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_7184 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_7184 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_7185 IPR000639 Epoxide hydrolase-like AMED_7185 IPR000073 Alpha/beta hydrolase fold-1 AMED_7185 IPR029058 Alpha/Beta hydrolase fold AMED_7186 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7186 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7186 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMED_7186 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7187 IPR012349 FMN-binding split barrel AMED_7187 IPR002563 Flavin reductase like domain AMED_7188 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7188 IPR036291 NAD(P)-binding domain superfamily AMED_7188 IPR023985 Mycofactocin-dependent oxidoreductase AMED_7189 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_7189 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AMED_7189 IPR012349 FMN-binding split barrel AMED_7189 IPR000659 Pyridoxamine 5'-phosphate oxidase AMED_7189 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AMED_7190 IPR020617 Thiolase, C-terminal AMED_7190 IPR020610 Thiolase, active site AMED_7190 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_7190 IPR020616 Thiolase, N-terminal AMED_7190 IPR002155 Thiolase AMED_7190 IPR012805 Acetyl-CoA C-acyltransferase FadA AMED_7190 IPR020613 Thiolase, conserved site AMED_7190 IPR016039 Thiolase-like AMED_7191 IPR003673 CoA-transferase family III AMED_7191 IPR023606 CoA-transferase family III domain superfamily AMED_7192 IPR029045 ClpP/crotonase-like domain superfamily AMED_7192 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7192 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7192 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7193 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7193 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7193 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_7193 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7193 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7193 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7193 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7194 IPR036291 NAD(P)-binding domain superfamily AMED_7194 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7194 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7195 IPR010192 2-succinylbenzoate--CoA ligase AMED_7195 IPR025110 AMP-binding enzyme, C-terminal domain AMED_7195 IPR020845 AMP-binding, conserved site AMED_7195 IPR042099 AMP-dependent synthetase-like superfamily AMED_7195 IPR000873 AMP-dependent synthetase/ligase AMED_7197 IPR000873 AMP-dependent synthetase/ligase AMED_7197 IPR020845 AMP-binding, conserved site AMED_7197 IPR020459 AMP-binding AMED_7197 IPR025110 AMP-binding enzyme, C-terminal domain AMED_7197 IPR042099 AMP-dependent synthetase-like superfamily AMED_7199 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7199 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7199 IPR029045 ClpP/crotonase-like domain superfamily AMED_7199 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7200 IPR002155 Thiolase AMED_7200 IPR016039 Thiolase-like AMED_7200 IPR020616 Thiolase, N-terminal AMED_7200 IPR020610 Thiolase, active site AMED_7200 IPR020617 Thiolase, C-terminal AMED_7200 IPR020613 Thiolase, conserved site AMED_7200 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_7201 IPR029045 ClpP/crotonase-like domain superfamily AMED_7201 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB AMED_7201 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7201 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7204 IPR003673 CoA-transferase family III AMED_7204 IPR023606 CoA-transferase family III domain superfamily AMED_7204 IPR017659 Formyl-CoA:oxalate CoA-transferase AMED_7205 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7205 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7205 IPR029045 ClpP/crotonase-like domain superfamily AMED_7205 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7207 IPR006390 Dihydropteroate synthase AMED_7207 IPR000489 Pterin-binding domain AMED_7207 IPR011005 Dihydropteroate synthase-like AMED_7209 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMED_7209 IPR015590 Aldehyde dehydrogenase domain AMED_7209 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_7209 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_7209 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_7209 IPR016161 Aldehyde/histidinol dehydrogenase AMED_7211 IPR001128 Cytochrome P450 AMED_7211 IPR002397 Cytochrome P450, B-class AMED_7211 IPR017972 Cytochrome P450, conserved site AMED_7211 IPR036396 Cytochrome P450 superfamily AMED_7212 IPR001080 3Fe-4S ferredoxin AMED_7212 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_7213 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_7213 IPR023753 FAD/NAD(P)-binding domain AMED_7213 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7213 IPR028202 Reductase, C-terminal AMED_7214 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7214 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7214 IPR011283 Acetoacetyl-CoA reductase AMED_7214 IPR036291 NAD(P)-binding domain superfamily AMED_7215 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7215 IPR020946 Flavin monooxygenase-like AMED_7216 IPR020946 Flavin monooxygenase-like AMED_7216 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7220 IPR036380 Isochorismatase-like superfamily AMED_7220 IPR000868 Isochorismatase-like AMED_7220 IPR016291 Isochorismatase AMED_7223 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_7223 IPR009057 Homeobox-like domain superfamily AMED_7223 IPR001647 DNA-binding HTH domain, TetR-type AMED_7223 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7223 IPR013572 Transcription regulator MAATS, C-terminal AMED_7225 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_7225 IPR029061 Thiamin diphosphate-binding fold AMED_7225 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_7225 IPR033248 Transketolase, C-terminal domain AMED_7227 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7227 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_7227 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7227 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7227 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7227 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7227 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7228 IPR017972 Cytochrome P450, conserved site AMED_7228 IPR002397 Cytochrome P450, B-class AMED_7228 IPR036396 Cytochrome P450 superfamily AMED_7228 IPR001128 Cytochrome P450 AMED_7229 IPR023753 FAD/NAD(P)-binding domain AMED_7229 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7229 IPR028202 Reductase, C-terminal AMED_7229 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_7230 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_7230 IPR001080 3Fe-4S ferredoxin AMED_7231 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7231 IPR011032 GroES-like superfamily AMED_7231 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7231 IPR020843 Polyketide synthase, enoylreductase domain AMED_7231 IPR036291 NAD(P)-binding domain superfamily AMED_7231 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_7233 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7233 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_7234 IPR000792 Transcription regulator LuxR, C-terminal AMED_7234 IPR001789 Signal transduction response regulator, receiver domain AMED_7234 IPR016032 Signal transduction response regulator, C-terminal effector AMED_7234 IPR011006 CheY-like superfamily AMED_7235 IPR042099 AMP-dependent synthetase-like superfamily AMED_7235 IPR020845 AMP-binding, conserved site AMED_7235 IPR000873 AMP-dependent synthetase/ligase AMED_7236 IPR020845 AMP-binding, conserved site AMED_7236 IPR000873 AMP-dependent synthetase/ligase AMED_7236 IPR042099 AMP-dependent synthetase-like superfamily AMED_7238 IPR036849 Enolase-like, C-terminal domain superfamily AMED_7238 IPR029017 Enolase-like, N-terminal AMED_7238 IPR029065 Enolase C-terminal domain-like AMED_7238 IPR023592 D-galactonate dehydratase AMED_7238 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AMED_7238 IPR034593 Mandelate racemase-like AMED_7238 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_7238 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_7239 IPR011701 Major facilitator superfamily AMED_7239 IPR020846 Major facilitator superfamily domain AMED_7239 IPR036259 MFS transporter superfamily AMED_7239 IPR000849 Sugar phosphate transporter AMED_7246 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMED_7246 IPR001303 Class II aldolase/adducin N-terminal AMED_7247 IPR005829 Sugar transporter, conserved site AMED_7247 IPR020846 Major facilitator superfamily domain AMED_7247 IPR004736 MFS transporter, metabolite:H symporter AMED_7247 IPR005828 Major facilitator, sugar transporter-like AMED_7247 IPR011701 Major facilitator superfamily AMED_7247 IPR036259 MFS transporter superfamily AMED_7248 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_7248 IPR001279 Metallo-beta-lactamase AMED_7248 IPR022877 Protein of unknown funcion UPF0173 AMED_7253 IPR038084 GlcG-like domain superfamily AMED_7253 IPR010371 Uncharacterised protein family UPF0303 AMED_7253 IPR005624 Haem-degrading AMED_7254 IPR000683 Oxidoreductase, N-terminal AMED_7254 IPR036291 NAD(P)-binding domain superfamily AMED_7254 IPR004104 Oxidoreductase, C-terminal AMED_7255 IPR018043 Sodium:galactoside symporter, conserved site AMED_7255 IPR036259 MFS transporter superfamily AMED_7255 IPR039672 Lactose permease-like AMED_7256 IPR028082 Periplasmic binding protein-like I AMED_7256 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_7256 IPR000843 LacI-type HTH domain AMED_7257 IPR006059 Bacterial extracellular solute-binding protein AMED_7258 IPR035906 MetI-like superfamily AMED_7258 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7259 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7259 IPR035906 MetI-like superfamily AMED_7261 IPR000073 Alpha/beta hydrolase fold-1 AMED_7261 IPR026968 3-oxoadipate enol-lactonase 1/2 AMED_7261 IPR029058 Alpha/Beta hydrolase fold AMED_7262 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_7262 IPR023730 HTH-type transcriptional repressor NanR AMED_7262 IPR000524 Transcription regulator HTH, GntR AMED_7262 IPR011711 GntR, C-terminal AMED_7262 IPR036390 Winged helix DNA-binding domain superfamily AMED_7262 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7263 IPR029058 Alpha/Beta hydrolase fold AMED_7263 IPR000073 Alpha/beta hydrolase fold-1 AMED_7263 IPR026968 3-oxoadipate enol-lactonase 1/2 AMED_7266 IPR006398 2-hydroxy-3-oxopropionate reductase AMED_7266 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_7266 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMED_7266 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_7266 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMED_7266 IPR036291 NAD(P)-binding domain superfamily AMED_7266 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMED_7266 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMED_7267 IPR019800 Glycoside hydrolase, family 3, active site AMED_7267 IPR037524 PA14/GLEYA domain AMED_7267 IPR013783 Immunoglobulin-like fold AMED_7267 IPR017853 Glycoside hydrolase superfamily AMED_7267 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_7267 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_7267 IPR026891 Fibronectin type III-like domain AMED_7267 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_7267 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_7267 IPR011658 PA14 domain AMED_7267 IPR008979 Galactose-binding-like domain superfamily AMED_7268 IPR029009 Allosteric substrate binding domain superfamily AMED_7268 IPR036291 NAD(P)-binding domain superfamily AMED_7268 IPR006236 D-3-phosphoglycerate dehydrogenase AMED_7268 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_7268 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_7268 IPR002912 ACT domain AMED_7268 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_7268 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_7269 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_7269 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_7269 IPR036291 NAD(P)-binding domain superfamily AMED_7269 IPR013332 Ketopantoate reductase, N-terminal domain AMED_7269 IPR013752 Ketopantoate reductase, C-terminal domain AMED_7270 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7270 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7270 IPR029045 ClpP/crotonase-like domain superfamily AMED_7270 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_7270 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_7270 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_7270 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_7270 IPR036291 NAD(P)-binding domain superfamily AMED_7270 IPR012799 Fatty oxidation complex, alpha subunit FadB AMED_7271 IPR006284 Glutathione synthetase, prokaryotic AMED_7271 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AMED_7271 IPR004215 Prokaryotic glutathione synthetase, N-terminal AMED_7271 IPR011761 ATP-grasp fold AMED_7271 IPR013815 ATP-grasp fold, subdomain 1 AMED_7271 IPR016185 Pre-ATP-grasp domain superfamily AMED_7274 IPR003673 CoA-transferase family III AMED_7274 IPR023606 CoA-transferase family III domain superfamily AMED_7275 IPR040079 Glutathione Transferase family AMED_7275 IPR010987 Glutathione S-transferase, C-terminal-like AMED_7275 IPR034341 Stringent starvation protein A, N-terminal AMED_7275 IPR004046 Glutathione S-transferase, C-terminal AMED_7275 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMED_7275 IPR036249 Thioredoxin-like superfamily AMED_7275 IPR004045 Glutathione S-transferase, N-terminal AMED_7277 IPR011701 Major facilitator superfamily AMED_7277 IPR020846 Major facilitator superfamily domain AMED_7277 IPR036259 MFS transporter superfamily AMED_7278 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AMED_7280 IPR036291 NAD(P)-binding domain superfamily AMED_7280 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_7280 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_7280 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_7280 IPR022694 3-hydroxyacyl-CoA dehydrogenase AMED_7280 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_7280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_7291 IPR036086 ParB/Sulfiredoxin superfamily AMED_7291 IPR004437 ParB/RepB/Spo0J partition protein AMED_7291 IPR003115 ParB/Sulfiredoxin AMED_7291 IPR041468 ParB/Spo0J, HTH domain AMED_7294 IPR024412 Lsr2 AMED_7294 IPR042254 Lsr2, DNA binding domain AMED_7294 IPR042261 Lsr2, dimerization domain AMED_7313 IPR017624 Catechol 2,3 dioxygenase AMED_7313 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II AMED_7313 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_7313 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_7313 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_7315 IPR011005 Dihydropteroate synthase-like AMED_7315 IPR000489 Pterin-binding domain AMED_7315 IPR006390 Dihydropteroate synthase AMED_7323 IPR010359 IrrE N-terminal-like domain AMED_7328 IPR001509 NAD-dependent epimerase/dehydratase AMED_7328 IPR036291 NAD(P)-binding domain superfamily AMED_7331 IPR016040 NAD(P)-binding domain AMED_7331 IPR036291 NAD(P)-binding domain superfamily AMED_7334 IPR007197 Radical SAM AMED_7334 IPR013785 Aldolase-type TIM barrel AMED_7334 IPR019939 CofG family AMED_7334 IPR019940 CofH family AMED_7334 IPR020050 FO synthase, subunit 2 AMED_7334 IPR034405 F420, menaquinone cofactor biosynthesis AMED_7334 IPR006638 Elp3/MiaB/NifB AMED_7335 IPR013785 Aldolase-type TIM barrel AMED_7335 IPR019939 CofG family AMED_7335 IPR006638 Elp3/MiaB/NifB AMED_7335 IPR034405 F420, menaquinone cofactor biosynthesis AMED_7335 IPR019940 CofH family AMED_7335 IPR007197 Radical SAM AMED_7335 IPR020050 FO synthase, subunit 2 AMED_7336 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMED_7336 IPR036661 Luciferase-like domain superfamily AMED_7336 IPR031017 TAT-translocated F420-dependent dehydrogenase, FGD2 family AMED_7336 IPR011251 Luciferase-like domain AMED_7337 IPR036291 NAD(P)-binding domain superfamily AMED_7337 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7337 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7338 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMED_7338 IPR018062 HTH domain AraC-type, conserved site AMED_7338 IPR018060 DNA binding HTH domain, AraC-type AMED_7338 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMED_7338 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AMED_7338 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AMED_7338 IPR009057 Homeobox-like domain superfamily AMED_7338 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AMED_7338 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7338 IPR016221 Bifunctional regulatory protein Ada AMED_7338 IPR035451 Ada-like domain superfamily AMED_7338 IPR004026 Ada DNA repair, metal-binding AMED_7339 IPR036396 Cytochrome P450 superfamily AMED_7339 IPR017972 Cytochrome P450, conserved site AMED_7339 IPR002397 Cytochrome P450, B-class AMED_7339 IPR001128 Cytochrome P450 AMED_7340 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7340 IPR032710 NTF2-like domain superfamily AMED_7340 IPR039425 RNA polymerase sigma-70 like AMED_7340 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7340 IPR037401 SnoaL-like domain AMED_7340 IPR014284 RNA polymerase sigma-70 like domain AMED_7340 IPR013325 RNA polymerase sigma factor, region 2 AMED_7340 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_7340 IPR007627 RNA polymerase sigma-70 region 2 AMED_7340 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_7340 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_7341 IPR016166 FAD-binding domain, PCMH-type AMED_7341 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_7341 IPR036318 FAD-binding, type PCMH-like superfamily AMED_7341 IPR012951 Berberine/berberine-like AMED_7341 IPR006094 FAD linked oxidase, N-terminal AMED_7342 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_7342 IPR011251 Luciferase-like domain AMED_7342 IPR036661 Luciferase-like domain superfamily AMED_7344 IPR011701 Major facilitator superfamily AMED_7344 IPR036259 MFS transporter superfamily AMED_7344 IPR005829 Sugar transporter, conserved site AMED_7344 IPR020846 Major facilitator superfamily domain AMED_7353 IPR012338 Beta-lactamase/transpeptidase-like AMED_7353 IPR001466 Beta-lactamase-related AMED_7355 IPR032783 AraC-type transcription regulator, ligand-binding domain AMED_7355 IPR009057 Homeobox-like domain superfamily AMED_7355 IPR018060 DNA binding HTH domain, AraC-type AMED_7355 IPR018062 HTH domain AraC-type, conserved site AMED_7357 IPR005764 Adenine phosphoribosyl transferase AMED_7357 IPR000836 Phosphoribosyltransferase domain AMED_7357 IPR029057 Phosphoribosyltransferase-like AMED_7362 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7362 IPR035906 MetI-like superfamily AMED_7362 IPR011864 Phosphate ABC transporter, permease protein PstC AMED_7363 IPR035906 MetI-like superfamily AMED_7363 IPR005672 Phosphate transport system permease protein PstA AMED_7363 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7364 IPR005670 Phosphate transport system permease protein 1 AMED_7364 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7364 IPR003593 AAA+ ATPase domain AMED_7364 IPR003439 ABC transporter-like AMED_7364 IPR017871 ABC transporter, conserved site AMED_7364 IPR015850 ABC transporter, phosphate import, PstB AMED_7365 IPR024370 PBP domain AMED_7365 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS AMED_7368 IPR009057 Homeobox-like domain superfamily AMED_7368 IPR001647 DNA-binding HTH domain, TetR-type AMED_7368 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7369 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMED_7369 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7369 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7369 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7369 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7373 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMED_7373 IPR036928 Amidase signature (AS) superfamily AMED_7373 IPR023631 Amidase signature domain AMED_7373 IPR020556 Amidase, conserved site AMED_7373 IPR000120 Amidase AMED_7376 IPR036390 Winged helix DNA-binding domain superfamily AMED_7376 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7376 IPR000847 Transcription regulator HTH, LysR AMED_7376 IPR005119 LysR, substrate-binding AMED_7379 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_7379 IPR013783 Immunoglobulin-like fold AMED_7379 IPR017853 Glycoside hydrolase superfamily AMED_7379 IPR026891 Fibronectin type III-like domain AMED_7379 IPR019800 Glycoside hydrolase, family 3, active site AMED_7379 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_7379 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_7379 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_7380 IPR036291 NAD(P)-binding domain superfamily AMED_7380 IPR010099 Epimerase family protein SDR39U1 AMED_7380 IPR001509 NAD-dependent epimerase/dehydratase AMED_7380 IPR013549 Domain of unknown function DUF1731 AMED_7382 IPR017853 Glycoside hydrolase superfamily AMED_7382 IPR001547 Glycoside hydrolase, family 5 AMED_7382 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_7384 IPR003593 AAA+ ATPase domain AMED_7384 IPR003439 ABC transporter-like AMED_7384 IPR017871 ABC transporter, conserved site AMED_7384 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7385 IPR012341 Six-hairpin glycosidase-like superfamily AMED_7385 IPR004197 Cellulase, Ig-like domain AMED_7385 IPR008928 Six-hairpin glycosidase superfamily AMED_7385 IPR013783 Immunoglobulin-like fold AMED_7385 IPR001701 Glycoside hydrolase family 9 AMED_7385 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites AMED_7385 IPR018221 Glycoside hydrolase family 9, His active site AMED_7385 IPR014756 Immunoglobulin E-set AMED_7385 IPR003305 Carbohydrate-binding, CenC-like AMED_7385 IPR008979 Galactose-binding-like domain superfamily AMED_7386 IPR013785 Aldolase-type TIM barrel AMED_7386 IPR013780 Glycosyl hydrolase, all-beta AMED_7386 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_7386 IPR017853 Glycoside hydrolase superfamily AMED_7386 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_7386 IPR002241 Glycoside hydrolase, family 27 AMED_7395 IPR001296 Glycosyl transferase, family 1 AMED_7399 IPR001296 Glycosyl transferase, family 1 AMED_7399 IPR011875 Alpha-maltose-1-phosphate synthase AMED_7399 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_7400 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA AMED_7400 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_7400 IPR001296 Glycosyl transferase, family 1 AMED_7402 IPR003362 Bacterial sugar transferase AMED_7402 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMED_7402 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ AMED_7403 IPR039528 DPM1-like AMED_7403 IPR001173 Glycosyltransferase 2-like AMED_7403 IPR029044 Nucleotide-diphospho-sugar transferases AMED_7404 IPR004572 Protoporphyrinogen oxidase AMED_7404 IPR002937 Amine oxidase AMED_7404 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7405 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like AMED_7405 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB AMED_7405 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain AMED_7409 IPR011050 Pectin lyase fold/virulence factor AMED_7409 IPR012334 Pectin lyase fold AMED_7409 IPR039448 Right handed beta helix domain AMED_7410 IPR008979 Galactose-binding-like domain superfamily AMED_7410 IPR040605 Glycoside hydrolase family 2, domain 5 AMED_7410 IPR006101 Glycoside hydrolase, family 2 AMED_7410 IPR023232 Glycoside hydrolase, family 2, active site AMED_7410 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_7410 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_7410 IPR017853 Glycoside hydrolase superfamily AMED_7410 IPR032311 Domain of unknown function DUF4982 AMED_7410 IPR013783 Immunoglobulin-like fold AMED_7410 IPR008964 Invasin/intimin cell-adhesion fragments AMED_7410 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_7410 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_7411 IPR034641 Polysaccharide lyase family 11 AMED_7411 IPR041624 Rhamnogalacturonan I lyase beta-sheet domain AMED_7411 IPR013783 Immunoglobulin-like fold AMED_7413 IPR017853 Glycoside hydrolase superfamily AMED_7413 IPR002883 CBM10/dockerin domain AMED_7413 IPR036601 CBM10 superfamily AMED_7413 IPR009031 Carbohydrate binding module family 10 AMED_7413 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_7413 IPR001547 Glycoside hydrolase, family 5 AMED_7414 IPR017853 Glycoside hydrolase superfamily AMED_7414 IPR011683 Glycosyl hydrolase family 53 AMED_7415 IPR000843 LacI-type HTH domain AMED_7415 IPR023588 Transcription regulator HTH, PurR AMED_7415 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_7415 IPR028082 Periplasmic binding protein-like I AMED_7417 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7417 IPR035906 MetI-like superfamily AMED_7418 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7418 IPR035906 MetI-like superfamily AMED_7423 IPR002645 STAS domain AMED_7423 IPR036513 STAS domain superfamily AMED_7423 IPR003658 Anti-sigma factor antagonist AMED_7426 IPR029058 Alpha/Beta hydrolase fold AMED_7426 IPR000073 Alpha/beta hydrolase fold-1 AMED_7427 IPR003660 HAMP domain AMED_7427 IPR036457 PPM-type phosphatase domain superfamily AMED_7427 IPR001932 PPM-type phosphatase domain AMED_7429 IPR020625 Schiff base-forming aldolase, active site AMED_7429 IPR013785 Aldolase-type TIM barrel AMED_7429 IPR020624 Schiff base-forming aldolase, conserved site AMED_7429 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AMED_7429 IPR002220 DapA-like AMED_7430 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7430 IPR036390 Winged helix DNA-binding domain superfamily AMED_7430 IPR005119 LysR, substrate-binding AMED_7430 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain AMED_7430 IPR000847 Transcription regulator HTH, LysR AMED_7431 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_7431 IPR004033 UbiE/COQ5 methyltransferase AMED_7431 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7433 IPR035466 GlmS/AgaS, SIS domain 1 AMED_7433 IPR035490 GlmS/FrlB, SIS domain 2 AMED_7433 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AMED_7433 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_7433 IPR001347 Sugar isomerase (SIS) AMED_7433 IPR017932 Glutamine amidotransferase type 2 domain AMED_7435 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_7435 IPR028202 Reductase, C-terminal AMED_7435 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7435 IPR023753 FAD/NAD(P)-binding domain AMED_7436 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_7436 IPR001080 3Fe-4S ferredoxin AMED_7438 IPR017972 Cytochrome P450, conserved site AMED_7438 IPR002397 Cytochrome P450, B-class AMED_7438 IPR036396 Cytochrome P450 superfamily AMED_7438 IPR001128 Cytochrome P450 AMED_7441 IPR023210 NADP-dependent oxidoreductase domain AMED_7441 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_7442 IPR019914 Pyrimidine monooxygenase RutA AMED_7442 IPR036661 Luciferase-like domain superfamily AMED_7442 IPR011251 Luciferase-like domain AMED_7445 IPR013783 Immunoglobulin-like fold AMED_7445 IPR001701 Glycoside hydrolase family 9 AMED_7445 IPR018221 Glycoside hydrolase family 9, His active site AMED_7445 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites AMED_7445 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_7445 IPR008928 Six-hairpin glycosidase superfamily AMED_7445 IPR018366 Carbohydrate-binding type-2, conserved site AMED_7445 IPR036966 Carbohydrate-binding module 3 superfamily AMED_7445 IPR012341 Six-hairpin glycosidase-like superfamily AMED_7445 IPR001919 Carbohydrate-binding type-2 domain AMED_7445 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_7445 IPR001956 Carbohydrate-binding module 3 AMED_7445 IPR036116 Fibronectin type III superfamily AMED_7445 IPR003961 Fibronectin type III AMED_7446 IPR004013 PHP domain AMED_7446 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMED_7446 IPR029460 DNA polymerase, helix-hairpin-helix motif AMED_7446 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AMED_7446 IPR040982 DNA polymerase III alpha subunit finger domain AMED_7446 IPR023073 DNA polymerase, error-prone AMED_7446 IPR016195 Polymerase/histidinol phosphatase-like AMED_7446 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_7446 IPR004805 DNA polymerase III, alpha subunit AMED_7447 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_7447 IPR014284 RNA polymerase sigma-70 like domain AMED_7447 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7447 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_7447 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7447 IPR013325 RNA polymerase sigma factor, region 2 AMED_7447 IPR007627 RNA polymerase sigma-70 region 2 AMED_7448 IPR011008 Dimeric alpha-beta barrel AMED_7448 IPR005545 YCII-related AMED_7450 IPR011193 Ornithine/lysine/arginine decarboxylase AMED_7450 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AMED_7450 IPR000310 Orn/Lys/Arg decarboxylase, major domain AMED_7450 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily AMED_7450 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7450 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7450 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AMED_7453 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative AMED_7453 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp AMED_7453 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7454 IPR000073 Alpha/beta hydrolase fold-1 AMED_7454 IPR029058 Alpha/Beta hydrolase fold AMED_7455 IPR000524 Transcription regulator HTH, GntR AMED_7455 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7455 IPR036390 Winged helix DNA-binding domain superfamily AMED_7456 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7456 IPR003439 ABC transporter-like AMED_7456 IPR003593 AAA+ ATPase domain AMED_7459 IPR029059 Alpha/beta hydrolase fold-5 AMED_7459 IPR029058 Alpha/Beta hydrolase fold AMED_7460 IPR024038 MYXO-CTERM domain AMED_7460 IPR029058 Alpha/Beta hydrolase fold AMED_7460 IPR010126 Esterase, PHB depolymerase AMED_7461 IPR001087 GDSL lipase/esterase AMED_7461 IPR036514 SGNH hydrolase superfamily AMED_7461 IPR036439 Dockerin domain superfamily AMED_7461 IPR016134 Dockerin domain AMED_7461 IPR002105 Dockerin type I repeat AMED_7461 IPR029058 Alpha/Beta hydrolase fold AMED_7462 IPR036291 NAD(P)-binding domain superfamily AMED_7462 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7462 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7463 IPR009040 Ferritin-like diiron domain AMED_7463 IPR009078 Ferritin-like superfamily AMED_7463 IPR008331 Ferritin/DPS protein domain AMED_7463 IPR041719 Ferritin, prokaryotic-type AMED_7463 IPR001519 Ferritin AMED_7463 IPR012347 Ferritin-like AMED_7465 IPR029787 Nucleotide cyclase AMED_7465 IPR001633 EAL domain AMED_7465 IPR035919 EAL domain superfamily AMED_7465 IPR005330 MHYT domain AMED_7465 IPR000160 GGDEF domain AMED_7468 IPR004942 Roadblock/LAMTOR2 domain AMED_7472 IPR016040 NAD(P)-binding domain AMED_7472 IPR036291 NAD(P)-binding domain superfamily AMED_7473 IPR036102 OsmC/Ohr superfamily AMED_7473 IPR003718 OsmC/Ohr family AMED_7473 IPR019953 Organic hydroperoxide resistance protein famiy AMED_7473 IPR015946 K homology domain-like, alpha/beta AMED_7475 IPR000639 Epoxide hydrolase-like AMED_7475 IPR000073 Alpha/beta hydrolase fold-1 AMED_7475 IPR029058 Alpha/Beta hydrolase fold AMED_7476 IPR000792 Transcription regulator LuxR, C-terminal AMED_7476 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7476 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_7476 IPR016032 Signal transduction response regulator, C-terminal effector AMED_7476 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7477 IPR011118 Tannase/feruloyl esterase AMED_7477 IPR029058 Alpha/Beta hydrolase fold AMED_7478 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_7478 IPR023210 NADP-dependent oxidoreductase domain AMED_7479 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_7479 IPR032466 Metal-dependent hydrolase AMED_7479 IPR006680 Amidohydrolase-related AMED_7479 IPR006679 Adenine deaminase AMED_7479 IPR026912 Adenine deaminase C-terminal domain AMED_7483 IPR017853 Glycoside hydrolase superfamily AMED_7483 IPR008979 Galactose-binding-like domain superfamily AMED_7483 IPR031330 Glycoside hydrolase 35, catalytic domain AMED_7483 IPR019801 Glycoside hydrolase, family 35, conserved site AMED_7483 IPR001944 Glycoside hydrolase, family 35 AMED_7483 IPR026283 Beta-galactosidase 1-like AMED_7484 IPR017853 Glycoside hydrolase superfamily AMED_7484 IPR013780 Glycosyl hydrolase, all-beta AMED_7484 IPR010720 Alpha-L-arabinofuranosidase, C-terminal AMED_7486 IPR035906 MetI-like superfamily AMED_7486 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7487 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7487 IPR035906 MetI-like superfamily AMED_7488 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_7488 IPR000843 LacI-type HTH domain AMED_7488 IPR028082 Periplasmic binding protein-like I AMED_7492 IPR029059 Alpha/beta hydrolase fold-5 AMED_7492 IPR029058 Alpha/Beta hydrolase fold AMED_7493 IPR020843 Polyketide synthase, enoylreductase domain AMED_7493 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7493 IPR011032 GroES-like superfamily AMED_7493 IPR036291 NAD(P)-binding domain superfamily AMED_7493 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7494 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_7494 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7494 IPR009057 Homeobox-like domain superfamily AMED_7494 IPR001647 DNA-binding HTH domain, TetR-type AMED_7494 IPR004111 Tetracycline repressor TetR, C-terminal AMED_7494 IPR003012 Tetracycline transcriptional regulator, TetR AMED_7496 IPR036378 FAS1 domain superfamily AMED_7496 IPR000782 FAS1 domain AMED_7498 IPR018764 Anti-sigma K factor RskA AMED_7499 IPR007630 RNA polymerase sigma-70 region 4 AMED_7499 IPR007627 RNA polymerase sigma-70 region 2 AMED_7499 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7499 IPR014284 RNA polymerase sigma-70 like domain AMED_7499 IPR039425 RNA polymerase sigma-70 like AMED_7499 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7499 IPR013325 RNA polymerase sigma factor, region 2 AMED_7500 IPR038658 Sporulation-specific cell division protein SsgB superfamily AMED_7500 IPR006776 Sporulation-specific cell division protein SsgB AMED_7501 IPR020845 AMP-binding, conserved site AMED_7501 IPR042099 AMP-dependent synthetase-like superfamily AMED_7501 IPR000873 AMP-dependent synthetase/ligase AMED_7501 IPR025110 AMP-binding enzyme, C-terminal domain AMED_7502 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMED_7502 IPR004404 Dihydroxy-acid dehydratase AMED_7502 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMED_7502 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMED_7502 IPR037237 IlvD/EDD, N-terminal domain AMED_7503 IPR036291 NAD(P)-binding domain superfamily AMED_7503 IPR023940 Dihydrodipicolinate reductase AMED_7503 IPR000846 Dihydrodipicolinate reductase, N-terminal AMED_7503 IPR022664 Dihydrodipicolinate reductase, conserved site AMED_7503 IPR022663 Dihydrodipicolinate reductase, C-terminal AMED_7505 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_7505 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_7505 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7505 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_7508 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_7508 IPR039425 RNA polymerase sigma-70 like AMED_7508 IPR014284 RNA polymerase sigma-70 like domain AMED_7508 IPR007627 RNA polymerase sigma-70 region 2 AMED_7508 IPR013325 RNA polymerase sigma factor, region 2 AMED_7508 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_7508 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7508 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7510 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7510 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_7510 IPR014284 RNA polymerase sigma-70 like domain AMED_7510 IPR013325 RNA polymerase sigma factor, region 2 AMED_7510 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_7510 IPR007627 RNA polymerase sigma-70 region 2 AMED_7510 IPR039425 RNA polymerase sigma-70 like AMED_7510 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7513 IPR032466 Metal-dependent hydrolase AMED_7513 IPR006680 Amidohydrolase-related AMED_7514 IPR001633 EAL domain AMED_7514 IPR005330 MHYT domain AMED_7514 IPR029787 Nucleotide cyclase AMED_7514 IPR000160 GGDEF domain AMED_7514 IPR035919 EAL domain superfamily AMED_7515 IPR037175 Kynurenine formamidase superfamily AMED_7515 IPR007325 Kynurenine formamidase/cyclase-like AMED_7519 IPR011583 Chitinase II AMED_7519 IPR036116 Fibronectin type III superfamily AMED_7519 IPR017853 Glycoside hydrolase superfamily AMED_7519 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_7519 IPR013783 Immunoglobulin-like fold AMED_7519 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_7519 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_7519 IPR001579 Glycoside hydrolase, chitinase active site AMED_7519 IPR018366 Carbohydrate-binding type-2, conserved site AMED_7519 IPR003961 Fibronectin type III AMED_7519 IPR001919 Carbohydrate-binding type-2 domain AMED_7519 IPR029070 Chitinase insertion domain superfamily AMED_7522 IPR000182 GNAT domain AMED_7522 IPR016181 Acyl-CoA N-acyltransferase AMED_7523 IPR004378 F420H(2)-dependent quinone reductase AMED_7523 IPR012349 FMN-binding split barrel AMED_7524 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMED_7524 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7524 IPR004033 UbiE/COQ5 methyltransferase AMED_7525 IPR012914 Purine catabolism PurC-like domain AMED_7525 IPR041522 CdaR, GGDEF-like domain AMED_7525 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_7525 IPR025736 PucR C-terminal helix-turn-helix domain AMED_7527 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_7527 IPR001387 Cro/C1-type helix-turn-helix domain AMED_7529 IPR021424 Porin PorA AMED_7530 IPR013216 Methyltransferase type 11 AMED_7530 IPR026669 Arsenite methyltransferase-like AMED_7530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7531 IPR013534 Starch synthase, catalytic domain AMED_7531 IPR011835 Bacterial/plant glycogen synthase AMED_7531 IPR001296 Glycosyl transferase, family 1 AMED_7536 IPR021798 Alpha-(1->3)-arabinofuranosyltransferase AMED_7536 IPR000421 Coagulation factor 5/8 C-terminal domain AMED_7536 IPR008979 Galactose-binding-like domain superfamily AMED_7541 IPR036390 Winged helix DNA-binding domain superfamily AMED_7541 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7541 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7541 IPR000524 Transcription regulator HTH, GntR AMED_7541 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7542 IPR004675 Alkylhydroperoxidase AhpD core AMED_7542 IPR029032 AhpD-like AMED_7542 IPR003779 Carboxymuconolactone decarboxylase-like AMED_7543 IPR020846 Major facilitator superfamily domain AMED_7543 IPR036259 MFS transporter superfamily AMED_7543 IPR005829 Sugar transporter, conserved site AMED_7543 IPR011701 Major facilitator superfamily AMED_7544 IPR005829 Sugar transporter, conserved site AMED_7544 IPR011701 Major facilitator superfamily AMED_7544 IPR036259 MFS transporter superfamily AMED_7544 IPR020846 Major facilitator superfamily domain AMED_7547 IPR036034 PDZ superfamily AMED_7547 IPR001940 Peptidase S1C AMED_7547 IPR001478 PDZ domain AMED_7547 IPR009003 Peptidase S1, PA clan AMED_7548 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7548 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMED_7548 IPR006222 Aminomethyltransferase, folate-binding domain AMED_7548 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMED_7548 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMED_7548 IPR006076 FAD dependent oxidoreductase AMED_7548 IPR032503 FAD dependent oxidoreductase, central domain AMED_7549 IPR036477 Formyl transferase, N-terminal domain superfamily AMED_7549 IPR002376 Formyl transferase, N-terminal AMED_7549 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AMED_7549 IPR002912 ACT domain AMED_7549 IPR004810 Formyltetrahydrofolate deformylase AMED_7551 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMED_7551 IPR041117 SoxA, A3 domain AMED_7551 IPR006277 Sarcosine oxidase, alpha subunit AMED_7551 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMED_7551 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMED_7551 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal AMED_7551 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMED_7551 IPR023753 FAD/NAD(P)-binding domain AMED_7551 IPR006222 Aminomethyltransferase, folate-binding domain AMED_7551 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7552 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric AMED_7552 IPR038561 Sarcosine oxidase subunit delta superfamily AMED_7553 IPR006278 Sarcosine oxidase subunit beta AMED_7553 IPR006076 FAD dependent oxidoreductase AMED_7553 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7554 IPR039429 Serine hydroxymethyltransferase-like domain AMED_7554 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7554 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMED_7554 IPR001085 Serine hydroxymethyltransferase AMED_7554 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7554 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7555 IPR036390 Winged helix DNA-binding domain superfamily AMED_7555 IPR011711 GntR, C-terminal AMED_7555 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_7555 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7555 IPR000524 Transcription regulator HTH, GntR AMED_7556 IPR039004 Carnitine monooxygenase oxygenase subunit AMED_7556 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AMED_7556 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AMED_7556 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AMED_7556 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_7556 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_7557 IPR001647 DNA-binding HTH domain, TetR-type AMED_7557 IPR009057 Homeobox-like domain superfamily AMED_7557 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7558 IPR016161 Aldehyde/histidinol dehydrogenase AMED_7558 IPR016160 Aldehyde dehydrogenase, cysteine active site AMED_7558 IPR015590 Aldehyde dehydrogenase domain AMED_7558 IPR011264 Betaine aldehyde dehydrogenase AMED_7558 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_7558 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_7558 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_7560 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_7560 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_7560 IPR012132 Glucose-methanol-choline oxidoreductase AMED_7560 IPR027424 Glucose Oxidase, domain 2 AMED_7560 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7560 IPR011533 Oxygen-dependent choline dehydrogenase AMED_7562 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_7562 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_7563 IPR028202 Reductase, C-terminal AMED_7563 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMED_7563 IPR023753 FAD/NAD(P)-binding domain AMED_7563 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7565 IPR000639 Epoxide hydrolase-like AMED_7565 IPR000073 Alpha/beta hydrolase fold-1 AMED_7565 IPR029058 Alpha/Beta hydrolase fold AMED_7565 IPR016292 Epoxide hydrolase AMED_7569 IPR011053 Single hybrid motif AMED_7569 IPR004167 Peripheral subunit-binding domain AMED_7569 IPR036625 E3-binding domain superfamily AMED_7569 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMED_7569 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_7569 IPR000089 Biotin/lipoyl attachment AMED_7570 IPR029061 Thiamin diphosphate-binding fold AMED_7570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_7570 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_7570 IPR033248 Transketolase, C-terminal domain AMED_7571 IPR001017 Dehydrogenase, E1 component AMED_7571 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha AMED_7571 IPR029061 Thiamin diphosphate-binding fold AMED_7574 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_7574 IPR013783 Immunoglobulin-like fold AMED_7574 IPR017853 Glycoside hydrolase superfamily AMED_7574 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_7574 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_7574 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_7574 IPR026891 Fibronectin type III-like domain AMED_7577 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7577 IPR016032 Signal transduction response regulator, C-terminal effector AMED_7577 IPR001789 Signal transduction response regulator, receiver domain AMED_7577 IPR039420 Transcriptional regulatory protein WalR-like AMED_7577 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_7577 IPR011006 CheY-like superfamily AMED_7578 IPR003594 Histidine kinase/HSP90-like ATPase AMED_7578 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_7578 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7578 IPR005467 Histidine kinase domain AMED_7578 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_7578 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_7578 IPR000014 PAS domain AMED_7578 IPR035965 PAS domain superfamily AMED_7578 IPR031967 PhoR, single Cache-like domain AMED_7578 IPR013767 PAS fold AMED_7579 IPR012733 4-hydroxybenzoate 3-monooxygenase AMED_7579 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7579 IPR002938 FAD-binding domain AMED_7581 IPR017853 Glycoside hydrolase superfamily AMED_7581 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_7581 IPR008979 Galactose-binding-like domain superfamily AMED_7581 IPR036116 Fibronectin type III superfamily AMED_7581 IPR003961 Fibronectin type III AMED_7581 IPR003305 Carbohydrate-binding, CenC-like AMED_7581 IPR013783 Immunoglobulin-like fold AMED_7581 IPR001579 Glycoside hydrolase, chitinase active site AMED_7581 IPR011583 Chitinase II AMED_7583 IPR011009 Protein kinase-like domain superfamily AMED_7583 IPR000719 Protein kinase domain AMED_7583 IPR017441 Protein kinase, ATP binding site AMED_7583 IPR008271 Serine/threonine-protein kinase, active site AMED_7583 IPR005543 PASTA domain AMED_7587 IPR011991 ArsR-like helix-turn-helix domain AMED_7587 IPR036390 Winged helix DNA-binding domain superfamily AMED_7587 IPR001845 HTH ArsR-type DNA-binding domain AMED_7587 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7589 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_7589 IPR011008 Dimeric alpha-beta barrel AMED_7589 IPR006313 Deferrochelatase/peroxidase EfeB AMED_7589 IPR006314 Dyp-type peroxidase AMED_7590 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMED_7590 IPR017767 Bacterial phospholipase C, phosphocholine-specific AMED_7590 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMED_7590 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_7590 IPR008475 Bacterial phospholipase C, C-terminal domain AMED_7590 IPR007312 Phosphoesterase AMED_7593 IPR011006 CheY-like superfamily AMED_7593 IPR001789 Signal transduction response regulator, receiver domain AMED_7594 IPR016132 Phytochrome chromophore attachment domain AMED_7594 IPR003594 Histidine kinase/HSP90-like ATPase AMED_7594 IPR005467 Histidine kinase domain AMED_7594 IPR013654 PAS fold-2 AMED_7594 IPR035965 PAS domain superfamily AMED_7594 IPR029016 GAF-like domain superfamily AMED_7594 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_7594 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_7594 IPR003018 GAF domain AMED_7594 IPR001294 Phytochrome AMED_7594 IPR013515 Phytochrome, central region AMED_7594 IPR000014 PAS domain AMED_7594 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7595 IPR011006 CheY-like superfamily AMED_7595 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_7595 IPR001789 Signal transduction response regulator, receiver domain AMED_7595 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7595 IPR039420 Transcriptional regulatory protein WalR-like AMED_7604 IPR000639 Epoxide hydrolase-like AMED_7604 IPR000073 Alpha/beta hydrolase fold-1 AMED_7604 IPR029058 Alpha/Beta hydrolase fold AMED_7605 IPR041522 CdaR, GGDEF-like domain AMED_7605 IPR025736 PucR C-terminal helix-turn-helix domain AMED_7605 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_7607 IPR020807 Polyketide synthase, dehydratase domain AMED_7607 IPR009081 Phosphopantetheine binding ACP domain AMED_7607 IPR006162 Phosphopantetheine attachment site AMED_7607 IPR013968 Polyketide synthase, ketoreductase domain AMED_7607 IPR014043 Acyl transferase AMED_7607 IPR036736 ACP-like superfamily AMED_7607 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_7607 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_7607 IPR018201 Beta-ketoacyl synthase, active site AMED_7607 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_7607 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_7607 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_7607 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_7607 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_7607 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_7607 IPR016039 Thiolase-like AMED_7607 IPR036291 NAD(P)-binding domain superfamily AMED_7612 IPR005693 Virulence factor Mce protein AMED_7612 IPR003399 Mce/MlaD AMED_7617 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMED_7617 IPR030802 ABC transporter permease MalE AMED_7621 IPR003439 ABC transporter-like AMED_7621 IPR017871 ABC transporter, conserved site AMED_7621 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_7621 IPR025302 Domain of unknown function DUF4162 AMED_7621 IPR003593 AAA+ ATPase domain AMED_7621 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7622 IPR013525 ABC-2 type transporter AMED_7622 IPR000412 ABC-2 transporter AMED_7633 IPR001647 DNA-binding HTH domain, TetR-type AMED_7633 IPR009057 Homeobox-like domain superfamily AMED_7633 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_7633 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7634 IPR024072 Dihydrofolate reductase-like domain superfamily AMED_7634 IPR004794 Riboflavin biosynthesis protein RibD AMED_7634 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AMED_7634 IPR016192 APOBEC/CMP deaminase, zinc-binding AMED_7634 IPR002125 Cytidine and deoxycytidylate deaminase domain AMED_7634 IPR016193 Cytidine deaminase-like AMED_7639 IPR011009 Protein kinase-like domain superfamily AMED_7639 IPR002575 Aminoglycoside phosphotransferase AMED_7640 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7640 IPR001647 DNA-binding HTH domain, TetR-type AMED_7640 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_7640 IPR009057 Homeobox-like domain superfamily AMED_7644 IPR042099 AMP-dependent synthetase-like superfamily AMED_7644 IPR000873 AMP-dependent synthetase/ligase AMED_7644 IPR025110 AMP-binding enzyme, C-terminal domain AMED_7644 IPR020845 AMP-binding, conserved site AMED_7645 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AMED_7645 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_7645 IPR006478 Formate dehydrogenase, alpha subunit AMED_7645 IPR006657 Molybdopterin dinucleotide-binding domain AMED_7645 IPR041924 Formate dehydrogenase H, N-terminal AMED_7645 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain AMED_7645 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMED_7645 IPR006656 Molybdopterin oxidoreductase AMED_7645 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_7646 IPR011251 Luciferase-like domain AMED_7646 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_7646 IPR036661 Luciferase-like domain superfamily AMED_7648 IPR002577 Helix-turn-helix, HxlR type AMED_7648 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7648 IPR036390 Winged helix DNA-binding domain superfamily AMED_7648 IPR011991 ArsR-like helix-turn-helix domain AMED_7650 IPR029062 Class I glutamine amidotransferase-like AMED_7650 IPR009057 Homeobox-like domain superfamily AMED_7650 IPR002818 DJ-1/PfpI AMED_7650 IPR018060 DNA binding HTH domain, AraC-type AMED_7650 IPR018062 HTH domain AraC-type, conserved site AMED_7652 IPR000182 GNAT domain AMED_7652 IPR016181 Acyl-CoA N-acyltransferase AMED_7655 IPR036259 MFS transporter superfamily AMED_7655 IPR011701 Major facilitator superfamily AMED_7655 IPR004638 Drug resistance transporter EmrB-like AMED_7655 IPR020846 Major facilitator superfamily domain AMED_7656 IPR029058 Alpha/Beta hydrolase fold AMED_7656 IPR000073 Alpha/beta hydrolase fold-1 AMED_7663 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7663 IPR036291 NAD(P)-binding domain superfamily AMED_7663 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7664 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain AMED_7664 IPR000847 Transcription regulator HTH, LysR AMED_7664 IPR005119 LysR, substrate-binding AMED_7664 IPR036390 Winged helix DNA-binding domain superfamily AMED_7664 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7669 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMED_7669 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AMED_7671 IPR029052 Metallo-dependent phosphatase-like AMED_7671 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_7673 IPR002589 Macro domain AMED_7674 IPR036412 HAD-like superfamily AMED_7674 IPR006439 HAD hydrolase, subfamily IA AMED_7674 IPR041492 Haloacid dehalogenase-like hydrolase AMED_7674 IPR023214 HAD superfamily AMED_7674 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_7679 IPR004942 Roadblock/LAMTOR2 domain AMED_7682 IPR000873 AMP-dependent synthetase/ligase AMED_7682 IPR042099 AMP-dependent synthetase-like superfamily AMED_7682 IPR020845 AMP-binding, conserved site AMED_7683 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7683 IPR036291 NAD(P)-binding domain superfamily AMED_7683 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7685 IPR013656 PAS fold-4 AMED_7685 IPR035965 PAS domain superfamily AMED_7685 IPR000700 PAS-associated, C-terminal AMED_7685 IPR000014 PAS domain AMED_7685 IPR029787 Nucleotide cyclase AMED_7685 IPR000160 GGDEF domain AMED_7688 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain AMED_7688 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_7690 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7690 IPR020946 Flavin monooxygenase-like AMED_7695 IPR020449 Transcription regulator HTH, AraC- type AMED_7695 IPR018060 DNA binding HTH domain, AraC-type AMED_7695 IPR018062 HTH domain AraC-type, conserved site AMED_7695 IPR029062 Class I glutamine amidotransferase-like AMED_7695 IPR009057 Homeobox-like domain superfamily AMED_7695 IPR002818 DJ-1/PfpI AMED_7696 IPR020471 Aldo/keto reductase AMED_7696 IPR023210 NADP-dependent oxidoreductase domain AMED_7696 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_7697 IPR009594 Transcription regulator HTH, AraC, N-terminal AMED_7697 IPR018060 DNA binding HTH domain, AraC-type AMED_7697 IPR009057 Homeobox-like domain superfamily AMED_7701 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMED_7701 IPR024706 Peroxiredoxin, AhpC-type AMED_7701 IPR036249 Thioredoxin-like superfamily AMED_7701 IPR013766 Thioredoxin domain AMED_7703 IPR002637 Ham1-like protein AMED_7703 IPR029001 Inosine triphosphate pyrophosphatase-like AMED_7703 IPR020922 dITP/XTP pyrophosphatase AMED_7704 IPR001247 Exoribonuclease, phosphorolytic domain 1 AMED_7704 IPR018336 Ribonuclease PH, conserved site AMED_7704 IPR002381 Ribonuclease PH, bacterial-type AMED_7704 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_7704 IPR036345 Exoribonuclease, PH domain 2 superfamily AMED_7704 IPR027408 PNPase/RNase PH domain superfamily AMED_7704 IPR015847 Exoribonuclease, phosphorolytic domain 2 AMED_7705 IPR001279 Metallo-beta-lactamase AMED_7705 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_7706 IPR033134 Asp/Glu racemase, active site 2 AMED_7706 IPR018187 Asp/Glu racemase, active site 1 AMED_7706 IPR001920 Asp/Glu racemase AMED_7706 IPR015942 Asp/Glu/hydantoin racemase AMED_7706 IPR004391 Glutamate racemase AMED_7707 IPR035952 Rhomboid-like superfamily AMED_7707 IPR022764 Peptidase S54, rhomboid domain AMED_7709 IPR004380 Aspartate racemase AMED_7709 IPR001920 Asp/Glu racemase AMED_7709 IPR018187 Asp/Glu racemase, active site 1 AMED_7709 IPR015942 Asp/Glu/hydantoin racemase AMED_7709 IPR033134 Asp/Glu racemase, active site 2 AMED_7710 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_7710 IPR022877 Protein of unknown funcion UPF0173 AMED_7710 IPR001279 Metallo-beta-lactamase AMED_7711 IPR005856 Cysteine synthase AMED_7711 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMED_7711 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_7711 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_7712 IPR012675 Beta-grasp domain superfamily AMED_7712 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMED_7712 IPR003749 Sulfur carrier ThiS/MoaD-like AMED_7713 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain AMED_7713 IPR028090 JAB domain, prokaryotic AMED_7713 IPR037518 MPN domain AMED_7715 IPR005321 Peptidase S58, DmpA AMED_7715 IPR016117 ArgJ-like domain superfamily AMED_7716 IPR018561 Domain of unknown function DUF2017 AMED_7717 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMED_7717 IPR003769 Adaptor protein ClpS, core AMED_7717 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMED_7718 IPR013785 Aldolase-type TIM barrel AMED_7718 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain AMED_7718 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AMED_7718 IPR006405 Nicotinate phosphoribosyltransferase pncB-type AMED_7718 IPR007229 Nicotinate phosphoribosyltransferase family AMED_7718 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AMED_7719 IPR036380 Isochorismatase-like superfamily AMED_7719 IPR000868 Isochorismatase-like AMED_7720 IPR000887 KDPG/KHG aldolase AMED_7720 IPR013785 Aldolase-type TIM barrel AMED_7722 IPR003784 BioY protein AMED_7723 IPR006555 ATP-dependent helicase, C-terminal AMED_7723 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type AMED_7723 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_7723 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7728 IPR002912 ACT domain AMED_7728 IPR023190 Phosphoserine phosphatase, domain 2 AMED_7728 IPR023214 HAD superfamily AMED_7728 IPR036412 HAD-like superfamily AMED_7729 IPR014241 Cytochrome c oxidase, subunit I bacterial type AMED_7729 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMED_7729 IPR000883 Cytochrome c oxidase subunit I AMED_7729 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMED_7729 IPR023616 Cytochrome c oxidase-like, subunit I domain AMED_7731 IPR019913 Pyrimidine utilisation protein RutD AMED_7731 IPR029058 Alpha/Beta hydrolase fold AMED_7731 IPR000073 Alpha/beta hydrolase fold-1 AMED_7732 IPR016181 Acyl-CoA N-acyltransferase AMED_7732 IPR000182 GNAT domain AMED_7734 IPR009057 Homeobox-like domain superfamily AMED_7734 IPR002514 Transposase IS3/IS911family AMED_7735 IPR025948 HTH-like domain AMED_7735 IPR001584 Integrase, catalytic core AMED_7735 IPR036397 Ribonuclease H superfamily AMED_7735 IPR012337 Ribonuclease H-like superfamily AMED_7738 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7738 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7738 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMED_7738 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7739 IPR000485 AsnC-type HTH domain AMED_7739 IPR036390 Winged helix DNA-binding domain superfamily AMED_7739 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7739 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_7739 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_7739 IPR019888 Transcription regulator AsnC-type AMED_7739 IPR011008 Dimeric alpha-beta barrel AMED_7741 IPR011008 Dimeric alpha-beta barrel AMED_7741 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_7741 IPR019888 Transcription regulator AsnC-type AMED_7741 IPR036390 Winged helix DNA-binding domain superfamily AMED_7741 IPR000485 AsnC-type HTH domain AMED_7741 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7742 IPR036661 Luciferase-like domain superfamily AMED_7742 IPR011251 Luciferase-like domain AMED_7742 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted AMED_7744 IPR036413 YaeB-like superfamily AMED_7744 IPR040372 YaeB-like AMED_7744 IPR023368 Uncharacterised protein family UPF0066, conserved site AMED_7744 IPR041369 TrmO, C-terminal AMED_7744 IPR023370 TrmO-like, N-terminal domain AMED_7744 IPR036414 YaeB, N-terminal domain superfamily AMED_7745 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_7745 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_7745 IPR022694 3-hydroxyacyl-CoA dehydrogenase AMED_7745 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_7745 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_7745 IPR036291 NAD(P)-binding domain superfamily AMED_7746 IPR036637 Phosphohistidine domain superfamily AMED_7746 IPR004701 Phosphotransferase system, mannose-type IIA component AMED_7746 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AMED_7746 IPR008731 Phosphotransferase system, enzyme I N-terminal AMED_7746 IPR036618 PtsI, HPr-binding domain superfamily AMED_7746 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily AMED_7746 IPR008279 PEP-utilising enzyme, mobile domain AMED_7746 IPR000032 Phosphocarrier protein HPr-like AMED_7746 IPR035895 HPr-like superfamily AMED_7747 IPR036117 DhaL domain superfamily AMED_7747 IPR004007 DhaL domain AMED_7747 IPR012737 Dihydroxyacetone kinase, subunit L AMED_7748 IPR004006 DhaK domain AMED_7748 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 AMED_7751 IPR038377 Sodium/glucose symporter superfamily AMED_7751 IPR001734 Sodium/solute symporter AMED_7751 IPR018212 Sodium/solute symporter, conserved site AMED_7754 IPR011856 tRNA endonuclease-like domain superfamily AMED_7754 IPR002793 Endonuclease NucS AMED_7755 IPR020476 NUDIX hydrolase AMED_7755 IPR015797 NUDIX hydrolase-like domain superfamily AMED_7755 IPR000086 NUDIX hydrolase domain AMED_7755 IPR022927 RNA pyrophosphohydrolase RppH AMED_7755 IPR020084 NUDIX hydrolase, conserved site AMED_7758 IPR029045 ClpP/crotonase-like domain superfamily AMED_7758 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7758 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB AMED_7758 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7758 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_7759 IPR018062 HTH domain AraC-type, conserved site AMED_7759 IPR018060 DNA binding HTH domain, AraC-type AMED_7759 IPR009057 Homeobox-like domain superfamily AMED_7759 IPR020449 Transcription regulator HTH, AraC- type AMED_7759 IPR002818 DJ-1/PfpI AMED_7759 IPR029062 Class I glutamine amidotransferase-like AMED_7760 IPR000868 Isochorismatase-like AMED_7760 IPR036380 Isochorismatase-like superfamily AMED_7761 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic AMED_7761 IPR006159 Methylmalonyl-CoA mutase, C-terminal AMED_7761 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic AMED_7761 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic AMED_7761 IPR036724 Cobalamin-binding domain superfamily AMED_7761 IPR006158 Cobalamin (vitamin B12)-binding domain AMED_7764 IPR001123 Amino acid exporter protein, LeuE-type AMED_7764 IPR004778 Homoserine/Threonine efflux protein AMED_7765 IPR004778 Homoserine/Threonine efflux protein AMED_7765 IPR001123 Amino acid exporter protein, LeuE-type AMED_7767 IPR001509 NAD-dependent epimerase/dehydratase AMED_7767 IPR036291 NAD(P)-binding domain superfamily AMED_7768 IPR032710 NTF2-like domain superfamily AMED_7768 IPR037401 SnoaL-like domain AMED_7769 IPR001647 DNA-binding HTH domain, TetR-type AMED_7769 IPR009057 Homeobox-like domain superfamily AMED_7769 IPR011075 Tetracyclin repressor-like, C-terminal domain AMED_7769 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_7770 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AMED_7770 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AMED_7770 IPR036968 Enolpyruvate transferase domain superfamily AMED_7770 IPR020683 Ankyrin repeat-containing domain AMED_7770 IPR001986 Enolpyruvate transferase domain AMED_7771 IPR016030 Cobalamin adenosyltransferase-like AMED_7771 IPR036451 Cobalamin adenosyltransferase-like superfamily AMED_7771 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AMED_7772 IPR036968 Enolpyruvate transferase domain superfamily AMED_7772 IPR001986 Enolpyruvate transferase domain AMED_7772 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AMED_7772 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AMED_7772 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AMED_7773 IPR019675 Protein of unknown function DUF2550 AMED_7774 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal AMED_7774 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal AMED_7774 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit AMED_7775 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7775 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMED_7775 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AMED_7775 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AMED_7775 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AMED_7775 IPR005722 ATP synthase, F1 complex, beta subunit AMED_7775 IPR003593 AAA+ ATPase domain AMED_7775 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AMED_7776 IPR000131 ATP synthase, F1 complex, gamma subunit AMED_7776 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily AMED_7777 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7777 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMED_7777 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AMED_7777 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AMED_7777 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AMED_7777 IPR005294 ATP synthase, F1 complex, alpha subunit AMED_7777 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain AMED_7777 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily AMED_7777 IPR000793 ATP synthase, alpha subunit, C-terminal AMED_7777 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMED_7778 IPR000711 ATPase, OSCP/delta subunit AMED_7778 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily AMED_7779 IPR005864 ATP synthase, F0 complex, subunit b, bacterial AMED_7779 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast AMED_7779 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AMED_7780 IPR035921 F/V-ATP synthase subunit C superfamily AMED_7780 IPR002379 V-ATPase proteolipid subunit C-like domain AMED_7780 IPR038662 F1F0 ATP synthase subunit C superfamily AMED_7780 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AMED_7780 IPR000454 ATP synthase, F0 complex, subunit C AMED_7781 IPR000568 ATP synthase, F0 complex, subunit A AMED_7781 IPR023011 ATP synthase, F0 complex, subunit A, active site AMED_7781 IPR035908 ATP synthase, F0 complex, subunit A superfamily AMED_7783 IPR000715 Glycosyl transferase, family 4 AMED_7784 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMED_7784 IPR006070 YrdC-like domain AMED_7786 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMED_7786 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMED_7786 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMED_7786 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7786 IPR007848 Methyltransferase small domain AMED_7786 IPR004556 Methyltransferase HemK-like AMED_7787 IPR001173 Glycosyltransferase 2-like AMED_7787 IPR029044 Nucleotide-diphospho-sugar transferases AMED_7790 IPR005139 Peptide chain release factor AMED_7790 IPR004373 Peptide chain release factor 1 AMED_7790 IPR000352 Peptide chain release factor class I AMED_7791 IPR042105 Ribosomal protein L31 superfamily AMED_7791 IPR027491 Ribosomal protein L31 type A AMED_7791 IPR002150 Ribosomal protein L31 AMED_7791 IPR034704 L28p-like AMED_7792 IPR011129 Cold shock domain AMED_7792 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMED_7792 IPR003593 AAA+ ATPase domain AMED_7792 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7792 IPR041703 Transcription termination factor Rho, ATP binding domain AMED_7792 IPR011112 Rho termination factor, N-terminal AMED_7792 IPR036269 Rho termination factor, N-terminal domain superfamily AMED_7792 IPR011113 Rho termination factor, RNA-binding domain AMED_7792 IPR004665 Transcription termination factor Rho AMED_7792 IPR012340 Nucleic acid-binding, OB-fold AMED_7793 IPR036554 GHMP kinase, C-terminal domain superfamily AMED_7793 IPR006204 GHMP kinase N-terminal domain AMED_7793 IPR006203 GHMP kinase, ATP-binding, conserved site AMED_7793 IPR000870 Homoserine kinase AMED_7793 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_7793 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_7794 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_7794 IPR004450 Threonine synthase-like AMED_7794 IPR026260 Threonine synthase, bacterial/archaeal AMED_7794 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_7794 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_7795 IPR002912 ACT domain AMED_7795 IPR019811 Homoserine dehydrogenase, conserved site AMED_7795 IPR016204 Homoserine dehydrogenase AMED_7795 IPR036291 NAD(P)-binding domain superfamily AMED_7795 IPR001342 Homoserine dehydrogenase, catalytic AMED_7795 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AMED_7796 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_7796 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_7796 IPR002986 Diaminopimelate decarboxylase, LysA AMED_7796 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_7796 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMED_7796 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_7796 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMED_7796 IPR029066 PLP-binding barrel AMED_7797 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AMED_7797 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_7797 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_7797 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_7797 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AMED_7797 IPR001278 Arginine-tRNA ligase AMED_7797 IPR008909 DALR anticodon binding AMED_7797 IPR005148 Arginyl tRNA synthetase N-terminal domain AMED_7801 IPR027469 Cation efflux transmembrane domain superfamily AMED_7801 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AMED_7801 IPR002524 Cation efflux protein AMED_7803 IPR036291 NAD(P)-binding domain superfamily AMED_7803 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7803 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7804 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_7804 IPR016292 Epoxide hydrolase AMED_7804 IPR010497 Epoxide hydrolase, N-terminal AMED_7804 IPR000639 Epoxide hydrolase-like AMED_7804 IPR029058 Alpha/Beta hydrolase fold AMED_7806 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7806 IPR011032 GroES-like superfamily AMED_7806 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_7806 IPR020843 Polyketide synthase, enoylreductase domain AMED_7806 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7806 IPR036291 NAD(P)-binding domain superfamily AMED_7807 IPR017520 Conserved hypothetical protein CHP03086 AMED_7807 IPR034660 DinB/YfiT-like putative metalloenzymes AMED_7807 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain AMED_7807 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type AMED_7816 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AMED_7816 IPR036523 SurE-like phosphatase/nucleotidase superfamily AMED_7816 IPR030048 Survival protein SurE AMED_7818 IPR013026 Tetratricopeptide repeat-containing domain AMED_7818 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_7818 IPR019734 Tetratricopeptide repeat AMED_7818 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7818 IPR016032 Signal transduction response regulator, C-terminal effector AMED_7818 IPR005158 Bacterial transcriptional activator domain AMED_7818 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7818 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_7818 IPR002182 NB-ARC AMED_7819 IPR029039 Flavoprotein-like superfamily AMED_7819 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_7819 IPR036396 Cytochrome P450 superfamily AMED_7819 IPR001128 Cytochrome P450 AMED_7819 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_7819 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AMED_7819 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase AMED_7819 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AMED_7819 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_7819 IPR017938 Riboflavin synthase-like beta-barrel AMED_7819 IPR017972 Cytochrome P450, conserved site AMED_7819 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_7819 IPR001094 Flavodoxin-like AMED_7819 IPR008254 Flavodoxin/nitric oxide synthase AMED_7821 IPR011050 Pectin lyase fold/virulence factor AMED_7821 IPR012334 Pectin lyase fold AMED_7821 IPR013783 Immunoglobulin-like fold AMED_7821 IPR000743 Glycoside hydrolase, family 28 AMED_7821 IPR036116 Fibronectin type III superfamily AMED_7821 IPR003961 Fibronectin type III AMED_7822 IPR017853 Glycoside hydrolase superfamily AMED_7822 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_7822 IPR003610 Carbohydrate-binding module family 5/12 AMED_7822 IPR003961 Fibronectin type III AMED_7822 IPR013783 Immunoglobulin-like fold AMED_7822 IPR036116 Fibronectin type III superfamily AMED_7822 IPR001223 Glycoside hydrolase family 18, catalytic domain AMED_7822 IPR011583 Chitinase II AMED_7822 IPR029070 Chitinase insertion domain superfamily AMED_7822 IPR001579 Glycoside hydrolase, chitinase active site AMED_7823 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_7823 IPR002241 Glycoside hydrolase, family 27 AMED_7823 IPR013785 Aldolase-type TIM barrel AMED_7823 IPR013780 Glycosyl hydrolase, all-beta AMED_7823 IPR017853 Glycoside hydrolase superfamily AMED_7823 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_7824 IPR000772 Ricin B, lectin domain AMED_7824 IPR035992 Ricin B-like lectins AMED_7824 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_7824 IPR005193 Glycoside hydrolase, family 62, arabinosidase AMED_7825 IPR001547 Glycoside hydrolase, family 5 AMED_7825 IPR013780 Glycosyl hydrolase, all-beta AMED_7825 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_7825 IPR024745 Glycoside hydrolase, family 44 AMED_7825 IPR036966 Carbohydrate-binding module 3 superfamily AMED_7825 IPR001956 Carbohydrate-binding module 3 AMED_7825 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_7825 IPR017853 Glycoside hydrolase superfamily AMED_7826 IPR000600 ROK family AMED_7826 IPR004654 Glucokinase ROK AMED_7827 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich AMED_7827 IPR006104 Glycosyl hydrolases family 2, sugar binding domain AMED_7827 IPR017853 Glycoside hydrolase superfamily AMED_7827 IPR013783 Immunoglobulin-like fold AMED_7827 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AMED_7827 IPR032311 Domain of unknown function DUF4982 AMED_7827 IPR008979 Galactose-binding-like domain superfamily AMED_7827 IPR040605 Glycoside hydrolase family 2, domain 5 AMED_7827 IPR006103 Glycoside hydrolase family 2, catalytic domain AMED_7828 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMED_7828 IPR035992 Ricin B-like lectins AMED_7828 IPR000772 Ricin B, lectin domain AMED_7828 IPR005193 Glycoside hydrolase, family 62, arabinosidase AMED_7829 IPR001000 Glycoside hydrolase family 10 domain AMED_7829 IPR031158 Glycosyl hydrolases family 10, active site AMED_7829 IPR017853 Glycoside hydrolase superfamily AMED_7829 IPR035992 Ricin B-like lectins AMED_7829 IPR000772 Ricin B, lectin domain AMED_7833 IPR013780 Glycosyl hydrolase, all-beta AMED_7833 IPR001956 Carbohydrate-binding module 3 AMED_7833 IPR036966 Carbohydrate-binding module 3 superfamily AMED_7833 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_7833 IPR024745 Glycoside hydrolase, family 44 AMED_7833 IPR017853 Glycoside hydrolase superfamily AMED_7833 IPR018087 Glycoside hydrolase, family 5, conserved site AMED_7833 IPR001547 Glycoside hydrolase, family 5 AMED_7837 IPR039448 Right handed beta helix domain AMED_7837 IPR012334 Pectin lyase fold AMED_7837 IPR011050 Pectin lyase fold/virulence factor AMED_7840 IPR002938 FAD-binding domain AMED_7840 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7842 IPR002559 Transposase, IS4-like AMED_7842 IPR032806 H repeat-associated protein, N-terminal AMED_7852 IPR005814 Aminotransferase class-III AMED_7852 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7852 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7852 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7853 IPR023606 CoA-transferase family III domain superfamily AMED_7853 IPR003673 CoA-transferase family III AMED_7857 IPR023985 Mycofactocin-dependent oxidoreductase AMED_7857 IPR036291 NAD(P)-binding domain superfamily AMED_7857 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7858 IPR003692 Hydantoinase B/oxoprolinase AMED_7859 IPR002821 Hydantoinase A/oxoprolinase AMED_7859 IPR008040 Hydantoinaseoxoprolinase, N-terminal AMED_7860 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_7860 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_7860 IPR000399 TPP-binding enzyme, conserved site AMED_7860 IPR029061 Thiamin diphosphate-binding fold AMED_7860 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_7860 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_7862 IPR014292 Acyltransferase, WS/DGAT/MGAT AMED_7862 IPR009721 O-acyltransferase WSD1, C-terminal AMED_7862 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_7862 IPR004255 O-acyltransferase, WSD1, N-terminal AMED_7864 IPR004305 Thiaminase-2/PQQC AMED_7864 IPR039068 Pyrroloquinoline-quinone synthase-like AMED_7864 IPR016084 Haem oxygenase-like, multi-helical AMED_7864 IPR011845 Coenzyme PQQ biosynthesis protein C AMED_7865 IPR022479 Coenzyme PQQ synthesis D, bacteria AMED_7865 IPR041881 Coenzyme PQQ synthesis protein D superfamily AMED_7865 IPR008792 Coenzyme PQQ synthesis protein D AMED_7866 IPR013785 Aldolase-type TIM barrel AMED_7866 IPR006638 Elp3/MiaB/NifB AMED_7866 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria AMED_7866 IPR017200 Coenzyme PQQ synthesis protein E AMED_7866 IPR007197 Radical SAM AMED_7866 IPR023885 4Fe4S-binding SPASM domain AMED_7867 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_7867 IPR011842 Coenzyme PQQ biosynthesis protein B AMED_7867 IPR001279 Metallo-beta-lactamase AMED_7870 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMED_7870 IPR000120 Amidase AMED_7870 IPR023631 Amidase signature domain AMED_7870 IPR036928 Amidase signature (AS) superfamily AMED_7871 IPR036291 NAD(P)-binding domain superfamily AMED_7871 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_7871 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_7876 IPR011829 Tartrate dehydrogenase AMED_7876 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AMED_7876 IPR024084 Isopropylmalate dehydrogenase-like domain AMED_7877 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_7877 IPR016161 Aldehyde/histidinol dehydrogenase AMED_7877 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_7877 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_7877 IPR015590 Aldehyde dehydrogenase domain AMED_7878 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7878 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7878 IPR005814 Aminotransferase class-III AMED_7878 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7880 IPR020471 Aldo/keto reductase AMED_7880 IPR023210 NADP-dependent oxidoreductase domain AMED_7880 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_7883 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMED_7883 IPR016166 FAD-binding domain, PCMH-type AMED_7883 IPR036318 FAD-binding, type PCMH-like superfamily AMED_7883 IPR016164 FAD-linked oxidase-like, C-terminal AMED_7883 IPR004113 FAD-linked oxidase, C-terminal AMED_7883 IPR006094 FAD linked oxidase, N-terminal AMED_7884 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_7884 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_7884 IPR029061 Thiamin diphosphate-binding fold AMED_7887 IPR020846 Major facilitator superfamily domain AMED_7887 IPR036259 MFS transporter superfamily AMED_7887 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_7887 IPR005829 Sugar transporter, conserved site AMED_7887 IPR036390 Winged helix DNA-binding domain superfamily AMED_7887 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7887 IPR011701 Major facilitator superfamily AMED_7889 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_7889 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7890 IPR000792 Transcription regulator LuxR, C-terminal AMED_7890 IPR001789 Signal transduction response regulator, receiver domain AMED_7890 IPR016032 Signal transduction response regulator, C-terminal effector AMED_7890 IPR011006 CheY-like superfamily AMED_7891 IPR004869 Membrane transport protein MMPL domain AMED_7891 IPR000731 Sterol-sensing domain AMED_7892 IPR005887 Alpha-1,2-mannosidase, putative AMED_7892 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_7892 IPR041371 Glycosyl hydrolase family 92 N-terminal domain AMED_7892 IPR012939 Glycosyl hydrolase family 92 AMED_7892 IPR008928 Six-hairpin glycosidase superfamily AMED_7893 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_7893 IPR012802 Fatty oxidation complex, alpha subunit FadJ AMED_7893 IPR001753 Enoyl-CoA hydratase/isomerase AMED_7893 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_7893 IPR036291 NAD(P)-binding domain superfamily AMED_7893 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_7893 IPR029045 ClpP/crotonase-like domain superfamily AMED_7893 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_7894 IPR020617 Thiolase, C-terminal AMED_7894 IPR020613 Thiolase, conserved site AMED_7894 IPR016039 Thiolase-like AMED_7894 IPR002155 Thiolase AMED_7894 IPR020610 Thiolase, active site AMED_7894 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_7894 IPR020616 Thiolase, N-terminal AMED_7895 IPR009057 Homeobox-like domain superfamily AMED_7895 IPR001647 DNA-binding HTH domain, TetR-type AMED_7902 IPR010640 Low temperature requirement A AMED_7903 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7903 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7903 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7903 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_7903 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7903 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7903 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7904 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7904 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7904 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7904 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7904 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7904 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7904 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_7912 IPR023214 HAD superfamily AMED_7912 IPR020476 NUDIX hydrolase AMED_7912 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMED_7912 IPR015797 NUDIX hydrolase-like domain superfamily AMED_7912 IPR020084 NUDIX hydrolase, conserved site AMED_7912 IPR036412 HAD-like superfamily AMED_7912 IPR000086 NUDIX hydrolase domain AMED_7914 IPR036291 NAD(P)-binding domain superfamily AMED_7914 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_7914 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_7916 IPR001714 Peptidase M24, methionine aminopeptidase AMED_7916 IPR036005 Creatinase/aminopeptidase-like AMED_7916 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AMED_7916 IPR000994 Peptidase M24 AMED_7920 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_7920 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_7920 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_7920 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_7920 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_7920 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_7920 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_7921 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMED_7921 IPR000089 Biotin/lipoyl attachment AMED_7921 IPR011054 Rudiment single hybrid motif AMED_7921 IPR011053 Single hybrid motif AMED_7921 IPR005482 Biotin carboxylase, C-terminal AMED_7921 IPR016185 Pre-ATP-grasp domain superfamily AMED_7921 IPR001882 Biotin-binding site AMED_7921 IPR005481 Biotin carboxylase-like, N-terminal domain AMED_7921 IPR011761 ATP-grasp fold AMED_7921 IPR011764 Biotin carboxylation domain AMED_7922 IPR034733 Acetyl-CoA carboxylase AMED_7922 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMED_7922 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMED_7922 IPR029045 ClpP/crotonase-like domain superfamily AMED_7923 IPR036514 SGNH hydrolase superfamily AMED_7923 IPR013830 SGNH hydrolase-type esterase domain AMED_7923 IPR037460 Streptomyces scabies esterase-like AMED_7925 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_7925 IPR001647 DNA-binding HTH domain, TetR-type AMED_7925 IPR009057 Homeobox-like domain superfamily AMED_7928 IPR000073 Alpha/beta hydrolase fold-1 AMED_7928 IPR029058 Alpha/Beta hydrolase fold AMED_7928 IPR008220 Homoserine/serine acetyltransferase MetX-like AMED_7929 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AMED_7929 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_7929 IPR015424 Pyridoxal phosphate-dependent transferase AMED_7929 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMED_7929 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_7930 IPR002938 FAD-binding domain AMED_7930 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7931 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_7931 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_7931 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_7935 IPR026669 Arsenite methyltransferase-like AMED_7935 IPR025714 Methyltransferase domain AMED_7935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_7936 IPR041522 CdaR, GGDEF-like domain AMED_7936 IPR025736 PucR C-terminal helix-turn-helix domain AMED_7936 IPR042070 PucR C-terminal helix-turn-helix domain superfamily AMED_7936 IPR029016 GAF-like domain superfamily AMED_7936 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal AMED_7938 IPR013154 Alcohol dehydrogenase, N-terminal AMED_7938 IPR036291 NAD(P)-binding domain superfamily AMED_7938 IPR011032 GroES-like superfamily AMED_7938 IPR013149 Alcohol dehydrogenase, C-terminal AMED_7938 IPR020843 Polyketide synthase, enoylreductase domain AMED_7939 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AMED_7939 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMED_7939 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMED_7939 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AMED_7939 IPR008141 Alanine dehydrogenase AMED_7939 IPR036291 NAD(P)-binding domain superfamily AMED_7941 IPR032404 Two-component sensor protein CpxA, periplasmic domain AMED_7941 IPR038515 CpxA, periplasmic domain superfamily AMED_7941 IPR003660 HAMP domain AMED_7941 IPR003594 Histidine kinase/HSP90-like ATPase AMED_7941 IPR005467 Histidine kinase domain AMED_7941 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_7941 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_7941 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7941 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_7943 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7943 IPR001789 Signal transduction response regulator, receiver domain AMED_7943 IPR039420 Transcriptional regulatory protein WalR-like AMED_7943 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_7943 IPR011006 CheY-like superfamily AMED_7944 IPR017871 ABC transporter, conserved site AMED_7944 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7944 IPR003439 ABC transporter-like AMED_7944 IPR003593 AAA+ ATPase domain AMED_7946 IPR003593 AAA+ ATPase domain AMED_7946 IPR017871 ABC transporter, conserved site AMED_7946 IPR039421 Type I protein exporter AMED_7946 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7946 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_7946 IPR011527 ABC transporter type 1, transmembrane domain AMED_7946 IPR003439 ABC transporter-like AMED_7949 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMED_7949 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain AMED_7949 IPR029061 Thiamin diphosphate-binding fold AMED_7949 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal AMED_7949 IPR001017 Dehydrogenase, E1 component AMED_7949 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_7949 IPR011603 2-oxoglutarate dehydrogenase E1 component AMED_7949 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily AMED_7949 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_7950 IPR000073 Alpha/beta hydrolase fold-1 AMED_7950 IPR029058 Alpha/Beta hydrolase fold AMED_7951 IPR027791 Galactosyltransferase, C-terminal AMED_7951 IPR001173 Glycosyltransferase 2-like AMED_7951 IPR029044 Nucleotide-diphospho-sugar transferases AMED_7952 IPR011701 Major facilitator superfamily AMED_7952 IPR020846 Major facilitator superfamily domain AMED_7952 IPR036259 MFS transporter superfamily AMED_7954 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase AMED_7954 IPR011251 Luciferase-like domain AMED_7954 IPR036661 Luciferase-like domain superfamily AMED_7954 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related AMED_7957 IPR035906 MetI-like superfamily AMED_7957 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7958 IPR035906 MetI-like superfamily AMED_7958 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_7959 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7959 IPR005892 Glycine betaine transport ATP-binding subunit AMED_7959 IPR000644 CBS domain AMED_7959 IPR003593 AAA+ ATPase domain AMED_7959 IPR003439 ABC transporter-like AMED_7959 IPR017871 ABC transporter, conserved site AMED_7961 IPR012301 Malic enzyme, N-terminal domain AMED_7961 IPR015884 Malic enzyme, conserved site AMED_7961 IPR002912 ACT domain AMED_7961 IPR037062 Malic enzyme, N-terminal domain superfamily AMED_7961 IPR001891 Malic oxidoreductase AMED_7961 IPR036291 NAD(P)-binding domain superfamily AMED_7961 IPR012302 Malic enzyme, NAD-binding AMED_7962 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AMED_7962 IPR014710 RmlC-like jelly roll fold AMED_7962 IPR011051 RmlC-like cupin domain superfamily AMED_7964 IPR000835 MarR-type HTH domain AMED_7964 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7964 IPR036390 Winged helix DNA-binding domain superfamily AMED_7967 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_7967 IPR029033 Histidine phosphatase superfamily AMED_7970 IPR001206 Diacylglycerol kinase, catalytic domain AMED_7970 IPR005218 Diacylglycerol/lipid kinase AMED_7970 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMED_7970 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMED_7971 IPR034768 WhiB-like iron-sulfur binding domain AMED_7971 IPR003482 Transcription factor WhiB AMED_7972 IPR003594 Histidine kinase/HSP90-like ATPase AMED_7972 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7972 IPR005467 Histidine kinase domain AMED_7972 IPR035965 PAS domain superfamily AMED_7972 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain AMED_7972 IPR022066 Signal transduction histidine kinase, N-terminal AMED_7972 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily AMED_7974 IPR024020 Anti sigma-R factor, mycothiol system,RsrA AMED_7974 IPR014295 Anti-sigma factor AMED_7974 IPR027383 Putative zinc-finger AMED_7975 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7975 IPR014284 RNA polymerase sigma-70 like domain AMED_7975 IPR039425 RNA polymerase sigma-70 like AMED_7975 IPR014293 RNA polymerase sigma-70, actinobacteria AMED_7975 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_7975 IPR007627 RNA polymerase sigma-70 region 2 AMED_7975 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_7975 IPR013325 RNA polymerase sigma factor, region 2 AMED_7975 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_7976 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AMED_7976 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AMED_7976 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMED_7978 IPR003738 SOS response associated peptidase (SRAP) AMED_7978 IPR036590 SOS response associated peptidase-like AMED_7979 IPR010914 RsgA GTPase domain AMED_7979 IPR004881 Ribosome biogenesis GTPase RsgA AMED_7979 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7979 IPR012340 Nucleic acid-binding, OB-fold AMED_7979 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AMED_7983 IPR004255 O-acyltransferase, WSD1, N-terminal AMED_7984 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_7984 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AMED_7984 IPR029028 Alpha/beta knot methyltransferases AMED_7984 IPR029064 50S ribosomal protein L30e-like AMED_7984 IPR004441 RNA methyltransferase TrmH family AMED_7984 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMED_7984 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AMED_7985 IPR006439 HAD hydrolase, subfamily IA AMED_7985 IPR036412 HAD-like superfamily AMED_7985 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB AMED_7985 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_7985 IPR023214 HAD superfamily AMED_7985 IPR041492 Haloacid dehalogenase-like hydrolase AMED_7987 IPR036396 Cytochrome P450 superfamily AMED_7987 IPR017972 Cytochrome P450, conserved site AMED_7987 IPR002397 Cytochrome P450, B-class AMED_7987 IPR001128 Cytochrome P450 AMED_7988 IPR036670 SecA, preprotein cross-linking domain superfamily AMED_7988 IPR011116 SecA Wing/Scaffold AMED_7988 IPR036266 SecA, Wing/Scaffold superfamily AMED_7988 IPR011130 SecA, preprotein cross-linking domain AMED_7988 IPR011115 SecA DEAD-like, N-terminal AMED_7988 IPR020937 SecA conserved site AMED_7988 IPR000185 Protein translocase subunit SecA AMED_7988 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7988 IPR014018 SecA motor DEAD AMED_7989 IPR034694 Ribosome hibernation promoting factor, long/plastid AMED_7989 IPR003489 Ribosome hibernation promoting factor/RaiA AMED_7989 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal AMED_7989 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily AMED_7989 IPR036567 Ribosome hibernation promotion factor-like AMED_7991 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMED_7991 IPR023959 Lipoprotein LpqB AMED_7991 IPR019606 GerMN domain AMED_7991 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal AMED_7992 IPR003660 HAMP domain AMED_7992 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_7992 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_7992 IPR005467 Histidine kinase domain AMED_7992 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_7992 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_7992 IPR003594 Histidine kinase/HSP90-like ATPase AMED_7993 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7993 IPR039420 Transcriptional regulatory protein WalR-like AMED_7993 IPR001789 Signal transduction response regulator, receiver domain AMED_7993 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_7993 IPR011006 CheY-like superfamily AMED_7994 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMED_7994 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMED_7994 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit AMED_7995 IPR029016 GAF-like domain superfamily AMED_7995 IPR014757 Transcription regulator IclR, C-terminal AMED_7995 IPR005471 Transcription regulator IclR, N-terminal AMED_7995 IPR036390 Winged helix DNA-binding domain superfamily AMED_7995 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_7998 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMED_7998 IPR006076 FAD dependent oxidoreductase AMED_7998 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_7998 IPR032503 FAD dependent oxidoreductase, central domain AMED_7998 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMED_7998 IPR006222 Aminomethyltransferase, folate-binding domain AMED_7998 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMED_7999 IPR039430 Thymidylate kinase-like domain AMED_7999 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_7999 IPR018095 Thymidylate kinase, conserved site AMED_7999 IPR018094 Thymidylate kinase AMED_8006 IPR042172 Adenosylhomocysteinase-like superfamily AMED_8006 IPR036291 NAD(P)-binding domain superfamily AMED_8006 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site AMED_8006 IPR000043 Adenosylhomocysteinase-like AMED_8006 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMED_8009 IPR004758 Amino acid transporter AMED_8009 IPR002293 Amino acid/polyamine transporter I AMED_8011 IPR019734 Tetratricopeptide repeat AMED_8011 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8011 IPR005158 Bacterial transcriptional activator domain AMED_8011 IPR002182 NB-ARC AMED_8011 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8011 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8011 IPR013026 Tetratricopeptide repeat-containing domain AMED_8011 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8011 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8012 IPR011051 RmlC-like cupin domain superfamily AMED_8012 IPR014710 RmlC-like jelly roll fold AMED_8012 IPR001250 Mannose-6-phosphate isomerase, type I AMED_8012 IPR018050 Phosphomannose isomerase, type I, conserved site AMED_8012 IPR016305 Mannose-6-phosphate isomerase AMED_8014 IPR005651 Trm112-like AMED_8015 IPR016066 Alpha-D-phosphohexomutase, conserved site AMED_8015 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMED_8015 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMED_8015 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMED_8015 IPR005841 Alpha-D-phosphohexomutase superfamily AMED_8015 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMED_8015 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMED_8015 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMED_8019 IPR003482 Transcription factor WhiB AMED_8019 IPR034768 WhiB-like iron-sulfur binding domain AMED_8023 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_8023 IPR017810 Mycothiol biosynthesis protein, MshB AMED_8023 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_8024 IPR017871 ABC transporter, conserved site AMED_8024 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8024 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8024 IPR003439 ABC transporter-like AMED_8024 IPR003593 AAA+ ATPase domain AMED_8025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8025 IPR035906 MetI-like superfamily AMED_8026 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8026 IPR035906 MetI-like superfamily AMED_8026 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMED_8027 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8027 IPR035906 MetI-like superfamily AMED_8029 IPR000914 Solute-binding protein family 5 domain AMED_8029 IPR039424 Solute-binding protein family 5 AMED_8030 IPR000795 Transcription factor, GTP-binding domain AMED_8030 IPR009000 Translation protein, beta-barrel domain superfamily AMED_8030 IPR042116 GTP-binding protein TypA/BipA, C-terminal AMED_8030 IPR006298 GTP-binding protein TypA AMED_8030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8030 IPR005225 Small GTP-binding protein domain AMED_8030 IPR031157 Tr-type G domain, conserved site AMED_8030 IPR035651 BipA, domain V AMED_8030 IPR000640 Elongation factor EFG, domain V-like AMED_8030 IPR035647 EF-G domain III/V-like AMED_8030 IPR041095 Elongation Factor G, domain II AMED_8030 IPR004161 Translation elongation factor EFTu-like, domain 2 AMED_8033 IPR024109 Tryptophan-tRNA ligase, bacterial-type AMED_8033 IPR002306 Tryptophan-tRNA ligase AMED_8033 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_8033 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMED_8033 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMED_8034 IPR000086 NUDIX hydrolase domain AMED_8034 IPR020084 NUDIX hydrolase, conserved site AMED_8034 IPR015797 NUDIX hydrolase-like domain superfamily AMED_8034 IPR020476 NUDIX hydrolase AMED_8034 IPR029033 Histidine phosphatase superfamily AMED_8034 IPR013078 Histidine phosphatase superfamily, clade-1 AMED_8035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8035 IPR005467 Histidine kinase domain AMED_8035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8035 IPR003660 HAMP domain AMED_8035 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8036 IPR011006 CheY-like superfamily AMED_8036 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8036 IPR001789 Signal transduction response regulator, receiver domain AMED_8036 IPR039420 Transcriptional regulatory protein WalR-like AMED_8036 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8038 IPR003593 AAA+ ATPase domain AMED_8038 IPR003439 ABC transporter-like AMED_8038 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8038 IPR017871 ABC transporter, conserved site AMED_8040 IPR013611 Transport-associated OB, type 2 AMED_8040 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8040 IPR008995 Molybdate/tungstate binding, C-terminal AMED_8040 IPR003593 AAA+ ATPase domain AMED_8040 IPR015853 ABC transporter, ferric cation import, FbpC AMED_8040 IPR003439 ABC transporter-like AMED_8040 IPR017871 ABC transporter, conserved site AMED_8041 IPR035906 MetI-like superfamily AMED_8041 IPR011867 Molybdate ABC transporter, permease protein AMED_8041 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8043 IPR001533 Pterin 4 alpha carbinolamine dehydratase AMED_8043 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily AMED_8047 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AMED_8047 IPR012675 Beta-grasp domain superfamily AMED_8047 IPR031167 OBG-type guanine nucleotide-binding (G) domain AMED_8047 IPR006073 GTP binding domain AMED_8047 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8047 IPR004095 TGS AMED_8047 IPR012676 TGS-like AMED_8047 IPR023192 TGS-like domain superfamily AMED_8047 IPR013029 YchF, C-terminal domain AMED_8047 IPR041706 YchF, N-terminal AMED_8048 IPR003265 HhH-GPD domain AMED_8048 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMED_8048 IPR018062 HTH domain AraC-type, conserved site AMED_8048 IPR018060 DNA binding HTH domain, AraC-type AMED_8048 IPR009057 Homeobox-like domain superfamily AMED_8048 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AMED_8048 IPR011257 DNA glycosylase AMED_8048 IPR004026 Ada DNA repair, metal-binding AMED_8048 IPR035451 Ada-like domain superfamily AMED_8048 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AMED_8050 IPR038729 Rad50/SbcC-type AAA domain AMED_8050 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8051 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMED_8051 IPR004593 Nuclease SbcCD subunit D AMED_8051 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain AMED_8051 IPR029052 Metallo-dependent phosphatase-like AMED_8051 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_8054 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AMED_8056 IPR003753 Exonuclease VII, large subunit AMED_8056 IPR020579 Exonuclease VII, large subunit, C-terminal AMED_8056 IPR025824 OB-fold nucleic acid binding domain AMED_8058 IPR037004 Exonuclease VII, small subunit superfamily AMED_8058 IPR003761 Exonuclease VII, small subunit AMED_8059 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase AMED_8061 IPR022890 Ferredoxin--NADP reductase, type 2 AMED_8061 IPR023753 FAD/NAD(P)-binding domain AMED_8061 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_8062 IPR024083 Fumarase/histidase, N-terminal AMED_8062 IPR005677 Fumarate hydratase, class II AMED_8062 IPR008948 L-Aspartase-like AMED_8062 IPR020557 Fumarate lyase, conserved site AMED_8062 IPR000362 Fumarate lyase family AMED_8062 IPR022761 Fumarate lyase, N-terminal AMED_8062 IPR018951 Fumarase C, C-terminal AMED_8064 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal AMED_8064 IPR000977 DNA ligase, ATP-dependent AMED_8064 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_8064 IPR012310 DNA ligase, ATP-dependent, central AMED_8064 IPR016059 DNA ligase, ATP-dependent, conserved site AMED_8064 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily AMED_8064 IPR012340 Nucleic acid-binding, OB-fold AMED_8064 IPR012308 DNA ligase, ATP-dependent, N-terminal AMED_8067 IPR001279 Metallo-beta-lactamase AMED_8067 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_8071 IPR005991 IMP dehydrogenase-related 1 AMED_8071 IPR000644 CBS domain AMED_8071 IPR013785 Aldolase-type TIM barrel AMED_8071 IPR001093 IMP dehydrogenase/GMP reductase AMED_8071 IPR005990 Inosine-5'-monophosphate dehydrogenase AMED_8074 IPR003714 PhoH-like protein AMED_8074 IPR002716 PIN domain AMED_8074 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8074 IPR029060 PIN-like domain superfamily AMED_8075 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AMED_8075 IPR036424 Decaprenyl diphosphate synthase-like superfamily AMED_8075 IPR001441 Decaprenyl diphosphate synthase-like AMED_8076 IPR005744 Hly-III AMED_8076 IPR004254 AdipoR/Haemolysin-III-related AMED_8079 IPR025889 General stress protein 17M-like domain AMED_8079 IPR019060 Domain of unknown function DUF2382 AMED_8081 IPR011049 Serralysin-like metalloprotease, C-terminal AMED_8081 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMED_8081 IPR012334 Pectin lyase fold AMED_8081 IPR001343 RTX calcium-binding nonapeptide repeat AMED_8081 IPR011050 Pectin lyase fold/virulence factor AMED_8081 IPR013858 Peptidase M10 serralysin, C-terminal AMED_8081 IPR006626 Parallel beta-helix repeat AMED_8081 IPR024535 Pectate lyase superfamily protein AMED_8081 IPR018511 Hemolysin-type calcium-binding conserved site AMED_8085 IPR024705 Spermatogenesis-associated protein 20 AMED_8085 IPR036249 Thioredoxin-like superfamily AMED_8085 IPR012341 Six-hairpin glycosidase-like superfamily AMED_8085 IPR004879 Domain of unknown function DUF255 AMED_8085 IPR008928 Six-hairpin glycosidase superfamily AMED_8087 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8087 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMED_8087 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMED_8087 IPR004556 Methyltransferase HemK-like AMED_8087 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMED_8087 IPR007848 Methyltransferase small domain AMED_8088 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase AMED_8088 IPR041780 PrpE-like, metallophosphatase domain AMED_8088 IPR029052 Metallo-dependent phosphatase-like AMED_8088 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE AMED_8088 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_8090 IPR017811 Mycothiol S-conjugate amidase Mca AMED_8090 IPR024078 Putative deacetylase LmbE-like domain superfamily AMED_8090 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMED_8092 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AMED_8092 IPR028624 Transcription elongation factor GreA/GreB AMED_8092 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AMED_8092 IPR023459 Transcription elongation factor GreA/GreB family AMED_8092 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AMED_8092 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AMED_8092 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AMED_8093 IPR001279 Metallo-beta-lactamase AMED_8093 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_8094 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMED_8094 IPR011008 Dimeric alpha-beta barrel AMED_8094 IPR019888 Transcription regulator AsnC-type AMED_8094 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8094 IPR036390 Winged helix DNA-binding domain superfamily AMED_8094 IPR000485 AsnC-type HTH domain AMED_8094 IPR011991 ArsR-like helix-turn-helix domain AMED_8094 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMED_8095 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_8095 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal AMED_8095 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_8095 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal AMED_8095 IPR005956 4-hydroxyphenylpyruvate dioxygenase AMED_8095 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_8101 IPR002912 ACT domain AMED_8101 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_8101 IPR005789 Threonine dehydratase, catabolic AMED_8101 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_8101 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_8104 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMED_8104 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8104 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_8104 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8107 IPR000644 CBS domain AMED_8107 IPR005857 Cystathionine beta-synthase AMED_8107 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_8107 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_8108 IPR002155 Thiolase AMED_8108 IPR016039 Thiolase-like AMED_8108 IPR020615 Thiolase, acyl-enzyme intermediate active site AMED_8108 IPR020610 Thiolase, active site AMED_8108 IPR020617 Thiolase, C-terminal AMED_8108 IPR020613 Thiolase, conserved site AMED_8108 IPR020616 Thiolase, N-terminal AMED_8113 IPR036291 NAD(P)-binding domain superfamily AMED_8113 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_8118 IPR000253 Forkhead-associated (FHA) domain AMED_8118 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8118 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8118 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8118 IPR008984 SMAD/FHA domain superfamily AMED_8118 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8118 IPR005158 Bacterial transcriptional activator domain AMED_8119 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8119 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8119 IPR013026 Tetratricopeptide repeat-containing domain AMED_8119 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8119 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8119 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8119 IPR005158 Bacterial transcriptional activator domain AMED_8119 IPR019734 Tetratricopeptide repeat AMED_8119 IPR002182 NB-ARC AMED_8120 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase AMED_8120 IPR018120 Glycoside hydrolase family 1, active site AMED_8120 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMED_8120 IPR017853 Glycoside hydrolase superfamily AMED_8120 IPR001360 Glycoside hydrolase family 1 AMED_8121 IPR035906 MetI-like superfamily AMED_8121 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8122 IPR035906 MetI-like superfamily AMED_8122 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8124 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8124 IPR011006 CheY-like superfamily AMED_8124 IPR001789 Signal transduction response regulator, receiver domain AMED_8124 IPR000792 Transcription regulator LuxR, C-terminal AMED_8125 IPR017853 Glycoside hydrolase superfamily AMED_8125 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_8125 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_8126 IPR023210 NADP-dependent oxidoreductase domain AMED_8126 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_8128 IPR011701 Major facilitator superfamily AMED_8128 IPR020846 Major facilitator superfamily domain AMED_8128 IPR036259 MFS transporter superfamily AMED_8134 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS AMED_8134 IPR020802 Polyketide synthase, thioesterase domain AMED_8134 IPR029058 Alpha/Beta hydrolase fold AMED_8134 IPR001031 Thioesterase AMED_8135 IPR033116 Serine proteases, trypsin family, serine active site AMED_8135 IPR003610 Carbohydrate-binding module family 5/12 AMED_8135 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_8135 IPR035070 Streptogrisin prodomain AMED_8135 IPR009003 Peptidase S1, PA clan AMED_8135 IPR036573 Carbohydrate-binding module superfamily 5/12 AMED_8135 IPR004236 Peptidase S1A, alpha-lytic prodomain AMED_8135 IPR001316 Peptidase S1A, streptogrisin AMED_8136 IPR020449 Transcription regulator HTH, AraC- type AMED_8136 IPR018062 HTH domain AraC-type, conserved site AMED_8136 IPR018060 DNA binding HTH domain, AraC-type AMED_8136 IPR009057 Homeobox-like domain superfamily AMED_8139 IPR016288 1, 4-beta cellobiohydrolase AMED_8139 IPR013783 Immunoglobulin-like fold AMED_8139 IPR001524 Glycoside hydrolase, family 6, conserved site AMED_8139 IPR003961 Fibronectin type III AMED_8139 IPR036116 Fibronectin type III superfamily AMED_8139 IPR012291 CBM2, carbohydrate-binding domain superfamily AMED_8139 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_8139 IPR001919 Carbohydrate-binding type-2 domain AMED_8139 IPR018366 Carbohydrate-binding type-2, conserved site AMED_8139 IPR036434 1, 4-beta cellobiohydrolase superfamily AMED_8140 IPR005225 Small GTP-binding protein domain AMED_8140 IPR035647 EF-G domain III/V-like AMED_8140 IPR000640 Elongation factor EFG, domain V-like AMED_8140 IPR031157 Tr-type G domain, conserved site AMED_8140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8140 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_8140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_8140 IPR000795 Transcription factor, GTP-binding domain AMED_8140 IPR005517 Translation elongation factor EFG/EF2, domain IV AMED_8140 IPR009000 Translation protein, beta-barrel domain superfamily AMED_8140 IPR035650 Tetracycline resistance protein, C-terminal AMED_8142 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8142 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8142 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8142 IPR005467 Histidine kinase domain AMED_8142 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8142 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8142 IPR003660 HAMP domain AMED_8143 IPR000941 Enolase AMED_8143 IPR029017 Enolase-like, N-terminal AMED_8143 IPR020811 Enolase, N-terminal AMED_8143 IPR020810 Enolase, C-terminal TIM barrel domain AMED_8143 IPR020809 Enolase, conserved site AMED_8143 IPR036849 Enolase-like, C-terminal domain superfamily AMED_8144 IPR019533 Peptidase S26 AMED_8144 IPR036286 LexA/Signal peptidase-like superfamily AMED_8144 IPR000223 Peptidase S26A, signal peptidase I AMED_8144 IPR019758 Peptidase S26A, signal peptidase I, conserved site AMED_8144 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AMED_8144 IPR019756 Peptidase S26A, signal peptidase I, serine active site AMED_8145 IPR039421 Type I protein exporter AMED_8145 IPR011527 ABC transporter type 1, transmembrane domain AMED_8145 IPR003593 AAA+ ATPase domain AMED_8145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8145 IPR017871 ABC transporter, conserved site AMED_8145 IPR003439 ABC transporter-like AMED_8145 IPR011917 ABC transporter, lipid A export, MsbA AMED_8145 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_8151 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8151 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8151 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8151 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8151 IPR000792 Transcription regulator LuxR, C-terminal AMED_8152 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_8152 IPR002938 FAD-binding domain AMED_8154 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8154 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8154 IPR000792 Transcription regulator LuxR, C-terminal AMED_8154 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8154 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8165 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8165 IPR014286 RNA polymerase sigma-70 RpoE type AMED_8165 IPR013325 RNA polymerase sigma factor, region 2 AMED_8165 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8165 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_8165 IPR014284 RNA polymerase sigma-70 like domain AMED_8165 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8165 IPR007627 RNA polymerase sigma-70 region 2 AMED_8165 IPR039425 RNA polymerase sigma-70 like AMED_8166 IPR017441 Protein kinase, ATP binding site AMED_8166 IPR008271 Serine/threonine-protein kinase, active site AMED_8166 IPR000719 Protein kinase domain AMED_8166 IPR005543 PASTA domain AMED_8166 IPR011009 Protein kinase-like domain superfamily AMED_8172 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_8172 IPR009057 Homeobox-like domain superfamily AMED_8172 IPR001647 DNA-binding HTH domain, TetR-type AMED_8173 IPR000943 RNA polymerase sigma-70 AMED_8173 IPR014284 RNA polymerase sigma-70 like domain AMED_8173 IPR007624 RNA polymerase sigma-70 region 3 AMED_8173 IPR007630 RNA polymerase sigma-70 region 4 AMED_8173 IPR012845 RNA polymerase sigma factor, FliA/WhiG AMED_8173 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8173 IPR007627 RNA polymerase sigma-70 region 2 AMED_8173 IPR013325 RNA polymerase sigma factor, region 2 AMED_8187 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMED_8187 IPR005122 Uracil-DNA glycosylase-like AMED_8188 IPR007581 Endonuclease V AMED_8190 IPR036852 Peptidase S8/S53 domain superfamily AMED_8190 IPR023827 Peptidase S8, subtilisin, Asp-active site AMED_8190 IPR022398 Peptidase S8, subtilisin, His-active site AMED_8190 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_8190 IPR015500 Peptidase S8, subtilisin-related AMED_8190 IPR034202 Subtilisin Carlsberg-like catalytic domain AMED_8190 IPR000209 Peptidase S8/S53 domain AMED_8191 IPR003439 ABC transporter-like AMED_8191 IPR017871 ABC transporter, conserved site AMED_8191 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8191 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8191 IPR003593 AAA+ ATPase domain AMED_8192 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8192 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8192 IPR017871 ABC transporter, conserved site AMED_8192 IPR003439 ABC transporter-like AMED_8192 IPR003593 AAA+ ATPase domain AMED_8193 IPR035906 MetI-like superfamily AMED_8193 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMED_8193 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8194 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8194 IPR035906 MetI-like superfamily AMED_8195 IPR000914 Solute-binding protein family 5 domain AMED_8195 IPR030678 Peptide/nickel binding protein, MppA-type AMED_8195 IPR039424 Solute-binding protein family 5 AMED_8196 IPR003695 Ppx/GppA phosphatase AMED_8200 IPR000941 Enolase AMED_8200 IPR020811 Enolase, N-terminal AMED_8200 IPR036849 Enolase-like, C-terminal domain superfamily AMED_8200 IPR029017 Enolase-like, N-terminal AMED_8200 IPR020809 Enolase, conserved site AMED_8200 IPR020810 Enolase, C-terminal TIM barrel domain AMED_8204 IPR004923 Iron permease FTR1/Fip1/EfeU AMED_8204 IPR036259 MFS transporter superfamily AMED_8204 IPR005217 Iron permease FTR1-like AMED_8205 IPR028096 EfeO-type cupredoxin-like domain AMED_8205 IPR038352 Imelysin-like domain superfamily AMED_8205 IPR008972 Cupredoxin AMED_8205 IPR034981 EfeO/Algp7, imelysin-like domain AMED_8205 IPR018976 Imelysin-like domain AMED_8206 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_8206 IPR006314 Dyp-type peroxidase AMED_8206 IPR006313 Deferrochelatase/peroxidase EfeB AMED_8206 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMED_8206 IPR011008 Dimeric alpha-beta barrel AMED_8209 IPR024031 PPOX class F420-dependent enzyme, MSMEG_5819/OxyR family AMED_8209 IPR012349 FMN-binding split barrel AMED_8209 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_8212 IPR003593 AAA+ ATPase domain AMED_8212 IPR003439 ABC transporter-like AMED_8212 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8212 IPR017871 ABC transporter, conserved site AMED_8214 IPR039425 RNA polymerase sigma-70 like AMED_8214 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8214 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8214 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8214 IPR014284 RNA polymerase sigma-70 like domain AMED_8214 IPR007627 RNA polymerase sigma-70 region 2 AMED_8214 IPR013325 RNA polymerase sigma factor, region 2 AMED_8215 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMED_8215 IPR011551 NTP pyrophosphohydrolase MazG AMED_8219 IPR004576 Transcription-repair coupling factor AMED_8219 IPR011545 DEAD/DEAH box helicase domain AMED_8219 IPR036101 CarD-like/TRCF domain superfamily AMED_8219 IPR003711 CarD-like/TRCF domain AMED_8219 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8219 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_8219 IPR005118 Transcription-repair-coupling factor, C-terminal domain AMED_8219 IPR041471 UvrB, interaction domain AMED_8219 IPR001650 Helicase, C-terminal AMED_8219 IPR037235 TRCF-like, C-terminal domain AMED_8222 IPR032818 DedA family AMED_8222 IPR032816 SNARE associated Golgi protein AMED_8223 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8223 IPR011530 Ribosomal RNA adenine dimethylase AMED_8223 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AMED_8223 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AMED_8223 IPR023165 rRNA adenine dimethylase-like AMED_8223 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMED_8224 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8224 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_8225 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8225 IPR000792 Transcription regulator LuxR, C-terminal AMED_8225 IPR001789 Signal transduction response regulator, receiver domain AMED_8225 IPR011006 CheY-like superfamily AMED_8226 IPR011042 Six-bladed beta-propeller, TolB-like AMED_8226 IPR012938 Glucose/Sorbosone dehydrogenase AMED_8226 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AMED_8228 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_8228 IPR036291 NAD(P)-binding domain superfamily AMED_8230 IPR015797 NUDIX hydrolase-like domain superfamily AMED_8230 IPR020476 NUDIX hydrolase AMED_8230 IPR000086 NUDIX hydrolase domain AMED_8231 IPR009057 Homeobox-like domain superfamily AMED_8231 IPR001647 DNA-binding HTH domain, TetR-type AMED_8231 IPR041646 IcaR, C-terminal AMED_8233 IPR029787 Nucleotide cyclase AMED_8233 IPR000160 GGDEF domain AMED_8234 IPR011004 Trimeric LpxA-like superfamily AMED_8234 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8234 IPR025877 MobA-like NTP transferase AMED_8234 IPR001451 Hexapeptide repeat AMED_8234 IPR038009 GlmU, C-terminal LbH domain AMED_8234 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AMED_8235 IPR005946 Ribose-phosphate pyrophosphokinase AMED_8235 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AMED_8235 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AMED_8235 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AMED_8235 IPR029057 Phosphoribosyltransferase-like AMED_8235 IPR000836 Phosphoribosyltransferase domain AMED_8239 IPR004029 UreE urease accessory, N-terminal AMED_8239 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AMED_8239 IPR029751 Ribosomal protein L25 AMED_8239 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AMED_8239 IPR037121 Ribosomal protein L25, C-terminal AMED_8239 IPR001021 Ribosomal protein L25, long-form AMED_8239 IPR020057 Ribosomal protein L25, beta domain AMED_8240 IPR036416 Peptidyl-tRNA hydrolase superfamily AMED_8240 IPR018171 Peptidyl-tRNA hydrolase, conserved site AMED_8240 IPR001328 Peptidyl-tRNA hydrolase AMED_8241 IPR007793 DivIVA family AMED_8241 IPR019933 DivIVA domain AMED_8243 IPR020845 AMP-binding, conserved site AMED_8243 IPR028154 AMP-dependent ligase, C-terminal AMED_8243 IPR000873 AMP-dependent synthetase/ligase AMED_8243 IPR042099 AMP-dependent synthetase-like superfamily AMED_8244 IPR003593 AAA+ ATPase domain AMED_8244 IPR032524 ABC transporter Uup, C-terminal AMED_8244 IPR003439 ABC transporter-like AMED_8244 IPR017871 ABC transporter, conserved site AMED_8244 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8244 IPR032781 ABC-transporter extension domain AMED_8244 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AMED_8246 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AMED_8246 IPR006204 GHMP kinase N-terminal domain AMED_8246 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_8246 IPR036554 GHMP kinase, C-terminal domain superfamily AMED_8246 IPR013750 GHMP kinase, C-terminal domain AMED_8246 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_8247 IPR017871 ABC transporter, conserved site AMED_8247 IPR003593 AAA+ ATPase domain AMED_8247 IPR026253 Methionine import ATP-binding protein MetN AMED_8247 IPR018449 NIL domain AMED_8247 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain AMED_8247 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal AMED_8247 IPR003439 ABC transporter-like AMED_8247 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8248 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8248 IPR011530 Ribosomal RNA adenine dimethylase AMED_8248 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AMED_8248 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AMED_8248 IPR023165 rRNA adenine dimethylase-like AMED_8248 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMED_8249 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 AMED_8249 IPR011098 G5 domain AMED_8249 IPR010618 Transglycosylase-like AMED_8249 IPR023346 Lysozyme-like domain superfamily AMED_8250 IPR015991 Uncharacterised hydrolase TatD-type AMED_8250 IPR018228 Deoxyribonuclease, TatD-related, conserved site AMED_8250 IPR032466 Metal-dependent hydrolase AMED_8250 IPR001130 TatD family AMED_8251 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_8251 IPR023458 Methionine-tRNA ligase, type 1 AMED_8251 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_8251 IPR029038 Methionyl-tRNA synthetase, Zn-domain AMED_8251 IPR033911 Methioninyl-tRNA synthetase core domain AMED_8251 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMED_8251 IPR014758 Methionyl-tRNA synthetase AMED_8251 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AMED_8251 IPR015413 Methionyl/Leucyl tRNA synthetase AMED_8253 IPR025302 Domain of unknown function DUF4162 AMED_8253 IPR017871 ABC transporter, conserved site AMED_8253 IPR003593 AAA+ ATPase domain AMED_8253 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8253 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_8253 IPR003439 ABC transporter-like AMED_8256 IPR019999 Anthranilate synthase component I-like AMED_8256 IPR015890 Chorismate-utilising enzyme, C-terminal AMED_8256 IPR006805 Anthranilate synthase component I, N-terminal AMED_8256 IPR005801 ADC synthase AMED_8256 IPR005802 Aminodeoxychorismate synthase, component I AMED_8257 IPR020843 Polyketide synthase, enoylreductase domain AMED_8257 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMED_8257 IPR036291 NAD(P)-binding domain superfamily AMED_8257 IPR011032 GroES-like superfamily AMED_8257 IPR013154 Alcohol dehydrogenase, N-terminal AMED_8257 IPR013149 Alcohol dehydrogenase, C-terminal AMED_8259 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AMED_8259 IPR014776 Tetrapyrrole methylase, subdomain 2 AMED_8259 IPR035996 Tetrapyrrole methylase superfamily AMED_8259 IPR000878 Tetrapyrrole methylase AMED_8259 IPR014777 Tetrapyrrole methylase, subdomain 1 AMED_8259 IPR008189 rRNA small subunit methyltransferase I AMED_8260 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain AMED_8260 IPR003342 Glycosyl transferase family 39/83 AMED_8260 IPR027005 Glycosyltransferase 39-like AMED_8262 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AMED_8262 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMED_8262 IPR011530 Ribosomal RNA adenine dimethylase AMED_8262 IPR023165 rRNA adenine dimethylase-like AMED_8262 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8262 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AMED_8263 IPR005543 PASTA domain AMED_8263 IPR008271 Serine/threonine-protein kinase, active site AMED_8263 IPR000719 Protein kinase domain AMED_8263 IPR017441 Protein kinase, ATP binding site AMED_8263 IPR011009 Protein kinase-like domain superfamily AMED_8264 IPR020845 AMP-binding, conserved site AMED_8264 IPR042099 AMP-dependent synthetase-like superfamily AMED_8264 IPR025110 AMP-binding enzyme, C-terminal domain AMED_8264 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AMED_8264 IPR000873 AMP-dependent synthetase/ligase AMED_8265 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AMED_8265 IPR029018 Beta-hexosaminidase-like, domain 2 AMED_8265 IPR017853 Glycoside hydrolase superfamily AMED_8265 IPR015883 Glycoside hydrolase family 20, catalytic domain AMED_8265 IPR025705 Beta-hexosaminidase AMED_8267 IPR011037 Pyruvate kinase-like, insert domain superfamily AMED_8267 IPR005163 3-alpha domain AMED_8267 IPR005302 Molybdenum cofactor sulfurase, C-terminal AMED_8269 IPR029039 Flavoprotein-like superfamily AMED_8269 IPR005025 NADPH-dependent FMN reductase-like AMED_8270 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8270 IPR007627 RNA polymerase sigma-70 region 2 AMED_8270 IPR014284 RNA polymerase sigma-70 like domain AMED_8270 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8270 IPR013325 RNA polymerase sigma factor, region 2 AMED_8270 IPR037401 SnoaL-like domain AMED_8270 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8270 IPR032710 NTF2-like domain superfamily AMED_8277 IPR000731 Sterol-sensing domain AMED_8277 IPR004869 Membrane transport protein MMPL domain AMED_8278 IPR001633 EAL domain AMED_8278 IPR035919 EAL domain superfamily AMED_8278 IPR000160 GGDEF domain AMED_8278 IPR000014 PAS domain AMED_8278 IPR029787 Nucleotide cyclase AMED_8278 IPR001610 PAC motif AMED_8278 IPR000700 PAS-associated, C-terminal AMED_8278 IPR035965 PAS domain superfamily AMED_8278 IPR013656 PAS fold-4 AMED_8278 IPR013655 PAS fold-3 AMED_8280 IPR036396 Cytochrome P450 superfamily AMED_8280 IPR002403 Cytochrome P450, E-class, group IV AMED_8280 IPR017972 Cytochrome P450, conserved site AMED_8280 IPR001128 Cytochrome P450 AMED_8281 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8281 IPR025669 AAA domain AMED_8284 IPR036291 NAD(P)-binding domain superfamily AMED_8284 IPR016040 NAD(P)-binding domain AMED_8286 IPR001789 Signal transduction response regulator, receiver domain AMED_8286 IPR011006 CheY-like superfamily AMED_8286 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8286 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8286 IPR039420 Transcriptional regulatory protein WalR-like AMED_8287 IPR003660 HAMP domain AMED_8287 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8287 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8287 IPR005467 Histidine kinase domain AMED_8287 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8287 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8287 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8288 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily AMED_8288 IPR000755 D-alanyl-D-alanine dipeptidase AMED_8289 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AMED_8289 IPR005905 D-alanine--D-alanine ligase AMED_8289 IPR011095 D-alanine--D-alanine ligase, C-terminal AMED_8289 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AMED_8289 IPR016185 Pre-ATP-grasp domain superfamily AMED_8289 IPR013815 ATP-grasp fold, subdomain 1 AMED_8289 IPR011761 ATP-grasp fold AMED_8290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMED_8290 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMED_8290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMED_8290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMED_8290 IPR036291 NAD(P)-binding domain superfamily AMED_8291 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_8291 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_8292 IPR036390 Winged helix DNA-binding domain superfamily AMED_8292 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8292 IPR002577 Helix-turn-helix, HxlR type AMED_8293 IPR004839 Aminotransferase, class I/classII AMED_8293 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8293 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_8293 IPR027619 Putative C-S lyase AMED_8293 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8294 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_8294 IPR013217 Methyltransferase type 12 AMED_8294 IPR001242 Condensation domain AMED_8294 IPR009081 Phosphopantetheine binding ACP domain AMED_8294 IPR010071 Amino acid adenylation domain AMED_8294 IPR036736 ACP-like superfamily AMED_8294 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_8294 IPR042099 AMP-dependent synthetase-like superfamily AMED_8294 IPR020845 AMP-binding, conserved site AMED_8294 IPR000873 AMP-dependent synthetase/ligase AMED_8294 IPR006162 Phosphopantetheine attachment site AMED_8294 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8296 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS AMED_8296 IPR001031 Thioesterase AMED_8296 IPR029058 Alpha/Beta hydrolase fold AMED_8297 IPR001123 Amino acid exporter protein, LeuE-type AMED_8297 IPR004778 Homoserine/Threonine efflux protein AMED_8299 IPR011009 Protein kinase-like domain superfamily AMED_8299 IPR008271 Serine/threonine-protein kinase, active site AMED_8299 IPR017441 Protein kinase, ATP binding site AMED_8299 IPR000719 Protein kinase domain AMED_8299 IPR005543 PASTA domain AMED_8309 IPR016181 Acyl-CoA N-acyltransferase AMED_8309 IPR000182 GNAT domain AMED_8310 IPR036688 MoeA, C-terminal, domain IV superfamily AMED_8310 IPR001453 MoaB/Mog domain AMED_8310 IPR036135 MoeA, N-terminal and linker domain superfamily AMED_8310 IPR038987 Molybdopterin biosynthesis protein MoeA-like AMED_8310 IPR005111 MoeA, C-terminal, domain IV AMED_8310 IPR036425 MoaB/Mog-like domain superfamily AMED_8310 IPR005110 MoeA, N-terminal and linker domain AMED_8311 IPR005835 Nucleotidyl transferase domain AMED_8311 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AMED_8311 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8312 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMED_8312 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMED_8312 IPR037171 NagB/RpiA transferase-like AMED_8315 IPR019823 Large-conductance mechanosensitive channel, conserved site AMED_8315 IPR001185 Large-conductance mechanosensitive channel AMED_8315 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AMED_8315 IPR036019 Gated mechanosensitive channel AMED_8317 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AMED_8317 IPR036425 MoaB/Mog-like domain superfamily AMED_8317 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AMED_8317 IPR008284 Molybdenum cofactor biosynthesis, conserved site AMED_8317 IPR023045 Molybdenum cofactor biosynthesis C AMED_8317 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA AMED_8317 IPR001453 MoaB/Mog domain AMED_8318 IPR001509 NAD-dependent epimerase/dehydratase AMED_8318 IPR036291 NAD(P)-binding domain superfamily AMED_8321 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8321 IPR000014 PAS domain AMED_8321 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8321 IPR005467 Histidine kinase domain AMED_8321 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8321 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8321 IPR031967 PhoR, single Cache-like domain AMED_8321 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8321 IPR035965 PAS domain superfamily AMED_8321 IPR013767 PAS fold AMED_8322 IPR039420 Transcriptional regulatory protein WalR-like AMED_8322 IPR011006 CheY-like superfamily AMED_8322 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8322 IPR001789 Signal transduction response regulator, receiver domain AMED_8322 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8324 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8324 IPR001173 Glycosyltransferase 2-like AMED_8326 IPR013216 Methyltransferase type 11 AMED_8326 IPR010233 Ubiquinone biosynthesis O-methyltransferase AMED_8326 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8329 IPR009003 Peptidase S1, PA clan AMED_8329 IPR036034 PDZ superfamily AMED_8329 IPR001940 Peptidase S1C AMED_8329 IPR001478 PDZ domain AMED_8330 IPR036265 HIT-like superfamily AMED_8330 IPR001937 Galactose-1-phosphate uridyl transferase, class I AMED_8330 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal AMED_8330 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site AMED_8330 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal AMED_8331 IPR037171 NagB/RpiA transferase-like AMED_8331 IPR014036 DeoR C-terminal sensor domain AMED_8331 IPR001034 DeoR-type HTH domain AMED_8331 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AMED_8331 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8331 IPR036390 Winged helix DNA-binding domain superfamily AMED_8332 IPR005467 Histidine kinase domain AMED_8332 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8332 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8332 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8332 IPR003660 HAMP domain AMED_8332 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8332 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8333 IPR011006 CheY-like superfamily AMED_8333 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8333 IPR001789 Signal transduction response regulator, receiver domain AMED_8333 IPR039420 Transcriptional regulatory protein WalR-like AMED_8333 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8334 IPR005115 Uncharacterised domain UPF0126 AMED_8335 IPR011006 CheY-like superfamily AMED_8335 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8335 IPR001789 Signal transduction response regulator, receiver domain AMED_8335 IPR000792 Transcription regulator LuxR, C-terminal AMED_8338 IPR011701 Major facilitator superfamily AMED_8338 IPR020846 Major facilitator superfamily domain AMED_8338 IPR036259 MFS transporter superfamily AMED_8338 IPR004638 Drug resistance transporter EmrB-like AMED_8339 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8339 IPR000847 Transcription regulator HTH, LysR AMED_8339 IPR005119 LysR, substrate-binding AMED_8339 IPR036390 Winged helix DNA-binding domain superfamily AMED_8340 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_8340 IPR023210 NADP-dependent oxidoreductase domain AMED_8340 IPR020471 Aldo/keto reductase AMED_8341 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8341 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_8341 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8341 IPR000524 Transcription regulator HTH, GntR AMED_8341 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8341 IPR036390 Winged helix DNA-binding domain superfamily AMED_8341 IPR004839 Aminotransferase, class I/classII AMED_8344 IPR011009 Protein kinase-like domain superfamily AMED_8344 IPR005543 PASTA domain AMED_8344 IPR008271 Serine/threonine-protein kinase, active site AMED_8344 IPR000719 Protein kinase domain AMED_8344 IPR017441 Protein kinase, ATP binding site AMED_8345 IPR033942 Inositol monophosphatase AMED_8345 IPR020550 Inositol monophosphatase, conserved site AMED_8345 IPR022337 Inositol monophosphatase, SuhB AMED_8345 IPR020583 Inositol monophosphatase, metal-binding site AMED_8345 IPR000760 Inositol monophosphatase-like AMED_8346 IPR024087 Creatininase-like superfamily AMED_8346 IPR003785 Creatininase/formamide hydrolase AMED_8346 IPR023871 Mycofactocin system creatininase family protein AMED_8347 IPR036144 RibA-like superfamily AMED_8347 IPR000926 GTP cyclohydrolase II, RibA AMED_8347 IPR032677 GTP cyclohydrolase II AMED_8350 IPR017814 Mycothiol biosynthesis protein, MshA AMED_8350 IPR001296 Glycosyl transferase, family 1 AMED_8350 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMED_8354 IPR014146 DNA ligase D, ligase domain AMED_8354 IPR012310 DNA ligase, ATP-dependent, central AMED_8354 IPR014145 DNA ligase D, polymerase domain AMED_8354 IPR014144 DNA ligase D, 3'-phosphoesterase domain AMED_8354 IPR012340 Nucleic acid-binding, OB-fold AMED_8354 IPR012309 DNA ligase, ATP-dependent, C-terminal AMED_8354 IPR033649 LigD polymerase domain, MtLigD-type AMED_8355 IPR018713 Domain of unknown function DUF2236 AMED_8356 IPR036390 Winged helix DNA-binding domain superfamily AMED_8356 IPR005119 LysR, substrate-binding AMED_8356 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8356 IPR000847 Transcription regulator HTH, LysR AMED_8357 IPR006094 FAD linked oxidase, N-terminal AMED_8357 IPR016167 FAD-binding, type PCMH, subdomain 1 AMED_8357 IPR016166 FAD-binding domain, PCMH-type AMED_8357 IPR016169 FAD-binding, type PCMH, subdomain 2 AMED_8357 IPR012951 Berberine/berberine-like AMED_8357 IPR006093 Oxygen oxidoreductase covalent FAD-binding site AMED_8357 IPR036318 FAD-binding, type PCMH-like superfamily AMED_8358 IPR036514 SGNH hydrolase superfamily AMED_8358 IPR002656 Acyltransferase 3 AMED_8359 IPR012349 FMN-binding split barrel AMED_8359 IPR004378 F420H(2)-dependent quinone reductase AMED_8366 IPR002938 FAD-binding domain AMED_8366 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_8367 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_8367 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_8367 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_8367 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_8367 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_8367 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_8367 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_8369 IPR001360 Glycoside hydrolase family 1 AMED_8369 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMED_8369 IPR017853 Glycoside hydrolase superfamily AMED_8369 IPR018120 Glycoside hydrolase family 1, active site AMED_8369 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase AMED_8370 IPR003593 AAA+ ATPase domain AMED_8370 IPR017871 ABC transporter, conserved site AMED_8370 IPR003439 ABC transporter-like AMED_8370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8370 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8371 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8371 IPR035906 MetI-like superfamily AMED_8371 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMED_8372 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8372 IPR035906 MetI-like superfamily AMED_8373 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8373 IPR017871 ABC transporter, conserved site AMED_8373 IPR003593 AAA+ ATPase domain AMED_8373 IPR003439 ABC transporter-like AMED_8373 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8374 IPR030678 Peptide/nickel binding protein, MppA-type AMED_8374 IPR000914 Solute-binding protein family 5 domain AMED_8374 IPR039424 Solute-binding protein family 5 AMED_8374 IPR023765 Solute-binding protein family 5, conserved site AMED_8374 IPR011980 Nickel ABC transporter, substrate-binding protein NikA AMED_8376 IPR000835 MarR-type HTH domain AMED_8376 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8376 IPR036390 Winged helix DNA-binding domain superfamily AMED_8376 IPR000600 ROK family AMED_8377 IPR008263 Glycoside hydrolase, family 16, active site AMED_8377 IPR000757 Glycoside hydrolase family 16 AMED_8377 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMED_8378 IPR037398 Glucan endo-1,3-beta-glucosidase AMED_8378 IPR032477 Beta-1,3-glucanase, N-terminal AMED_8378 IPR037176 Osmotin/thaumatin-like superfamily AMED_8378 IPR000772 Ricin B, lectin domain AMED_8378 IPR035992 Ricin B-like lectins AMED_8378 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_8379 IPR037176 Osmotin/thaumatin-like superfamily AMED_8379 IPR037398 Glucan endo-1,3-beta-glucosidase AMED_8379 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_8379 IPR035992 Ricin B-like lectins AMED_8379 IPR032477 Beta-1,3-glucanase, N-terminal AMED_8379 IPR000772 Ricin B, lectin domain AMED_8380 IPR017853 Glycoside hydrolase superfamily AMED_8382 IPR005829 Sugar transporter, conserved site AMED_8382 IPR036259 MFS transporter superfamily AMED_8382 IPR020846 Major facilitator superfamily domain AMED_8382 IPR011701 Major facilitator superfamily AMED_8383 IPR016938 Uncharacterised protein family UPF0317 AMED_8383 IPR038021 Putative hydro-lyase AMED_8383 IPR009906 D-glutamate cyclase AMED_8384 IPR005501 LamB/YcsF/PxpA-like AMED_8384 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMED_8385 IPR029000 Cyclophilin-like domain superfamily AMED_8385 IPR010016 KipI family AMED_8385 IPR003833 Carboxyltransferase domain, subdomain C and D AMED_8386 IPR003778 Carboxyltransferase domain, subdomain A and B AMED_8386 IPR029000 Cyclophilin-like domain superfamily AMED_8390 IPR004574 Alkylated DNA repair protein AlkB AMED_8390 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AMED_8390 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AMED_8390 IPR005123 Oxoglutarate/iron-dependent dioxygenase AMED_8391 IPR013154 Alcohol dehydrogenase, N-terminal AMED_8391 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_8391 IPR013149 Alcohol dehydrogenase, C-terminal AMED_8391 IPR020843 Polyketide synthase, enoylreductase domain AMED_8391 IPR036291 NAD(P)-binding domain superfamily AMED_8391 IPR011032 GroES-like superfamily AMED_8394 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8394 IPR022689 Iron dependent repressor AMED_8394 IPR036390 Winged helix DNA-binding domain superfamily AMED_8394 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily AMED_8394 IPR022687 DTXR-type HTH domain AMED_8394 IPR001367 Iron dependent repressor, metal binding and dimerisation domain AMED_8394 IPR022897 HTH-type transcription regulator MntR AMED_8397 IPR033932 YtcJ like AMED_8397 IPR032466 Metal-dependent hydrolase AMED_8397 IPR013108 Amidohydrolase 3 AMED_8397 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_8398 IPR014748 Enoyl-CoA hydratase, C-terminal AMED_8398 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMED_8398 IPR029045 ClpP/crotonase-like domain superfamily AMED_8398 IPR001753 Enoyl-CoA hydratase/isomerase AMED_8399 IPR020845 AMP-binding, conserved site AMED_8399 IPR025110 AMP-binding enzyme, C-terminal domain AMED_8399 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC AMED_8399 IPR000873 AMP-dependent synthetase/ligase AMED_8399 IPR042099 AMP-dependent synthetase-like superfamily AMED_8402 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_8402 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_8402 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_8402 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_8402 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_8402 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_8402 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_8404 IPR015890 Chorismate-utilising enzyme, C-terminal AMED_8404 IPR005801 ADC synthase AMED_8404 IPR004561 Isochorismate synthase AMED_8406 IPR042099 AMP-dependent synthetase-like superfamily AMED_8406 IPR000873 AMP-dependent synthetase/ligase AMED_8406 IPR020845 AMP-binding, conserved site AMED_8406 IPR025110 AMP-binding enzyme, C-terminal domain AMED_8407 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein AMED_8407 IPR006059 Bacterial extracellular solute-binding protein AMED_8408 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8408 IPR035906 MetI-like superfamily AMED_8409 IPR035906 MetI-like superfamily AMED_8409 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8414 IPR032710 NTF2-like domain superfamily AMED_8414 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8414 IPR037401 SnoaL-like domain AMED_8414 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8414 IPR013325 RNA polymerase sigma factor, region 2 AMED_8414 IPR007627 RNA polymerase sigma-70 region 2 AMED_8414 IPR014284 RNA polymerase sigma-70 like domain AMED_8414 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8415 IPR011032 GroES-like superfamily AMED_8415 IPR036291 NAD(P)-binding domain superfamily AMED_8415 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase AMED_8415 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMED_8415 IPR013154 Alcohol dehydrogenase, N-terminal AMED_8415 IPR013149 Alcohol dehydrogenase, C-terminal AMED_8417 IPR016166 FAD-binding domain, PCMH-type AMED_8417 IPR036318 FAD-binding, type PCMH-like superfamily AMED_8417 IPR004113 FAD-linked oxidase, C-terminal AMED_8417 IPR006094 FAD linked oxidase, N-terminal AMED_8417 IPR004490 Glycolate oxidase subunit GlcD AMED_8417 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMED_8417 IPR016164 FAD-linked oxidase-like, C-terminal AMED_8418 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_8418 IPR001647 DNA-binding HTH domain, TetR-type AMED_8418 IPR009057 Homeobox-like domain superfamily AMED_8418 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_8419 IPR006076 FAD dependent oxidoreductase AMED_8419 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_8419 IPR031656 Alpha-glycerophosphate oxidase, C-terminal AMED_8419 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily AMED_8419 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AMED_8422 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8422 IPR003439 ABC transporter-like AMED_8422 IPR017871 ABC transporter, conserved site AMED_8422 IPR025302 Domain of unknown function DUF4162 AMED_8422 IPR003593 AAA+ ATPase domain AMED_8425 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AMED_8425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_8425 IPR006050 DNA photolyase, N-terminal AMED_8425 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMED_8425 IPR002081 Cryptochrome/DNA photolyase class 1 AMED_8425 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMED_8425 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily AMED_8426 IPR016143 Citrate synthase-like, small alpha subdomain AMED_8426 IPR016142 Citrate synthase-like, large alpha subdomain AMED_8426 IPR002020 Citrate synthase AMED_8426 IPR019810 Citrate synthase active site AMED_8426 IPR024176 Citrate synthase, bacterial-type AMED_8426 IPR036969 Citrate synthase superfamily AMED_8426 IPR010953 Citrate synthase, type I AMED_8427 IPR011611 Carbohydrate kinase PfkB AMED_8427 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_8427 IPR029056 Ribokinase-like AMED_8429 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_8429 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_8429 IPR006089 Acyl-CoA dehydrogenase, conserved site AMED_8429 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_8429 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_8429 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_8429 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_8432 IPR026912 Adenine deaminase C-terminal domain AMED_8432 IPR006679 Adenine deaminase AMED_8432 IPR006680 Amidohydrolase-related AMED_8432 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_8432 IPR032466 Metal-dependent hydrolase AMED_8434 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_8434 IPR037480 YihR-like AMED_8434 IPR011013 Galactose mutarotase-like domain superfamily AMED_8434 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AMED_8435 IPR030400 Sedolisin domain AMED_8435 IPR015366 Peptidase S53, activation domain AMED_8435 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_8435 IPR000209 Peptidase S8/S53 domain AMED_8435 IPR036852 Peptidase S8/S53 domain superfamily AMED_8436 IPR009057 Homeobox-like domain superfamily AMED_8436 IPR001647 DNA-binding HTH domain, TetR-type AMED_8436 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_8437 IPR001279 Metallo-beta-lactamase AMED_8437 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_8438 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_8438 IPR001279 Metallo-beta-lactamase AMED_8440 IPR023722 Enterobactin exporter, EntS AMED_8440 IPR036259 MFS transporter superfamily AMED_8440 IPR010290 Transmembrane secretion effector AMED_8440 IPR020846 Major facilitator superfamily domain AMED_8441 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AMED_8441 IPR012349 FMN-binding split barrel AMED_8441 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_8441 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AMED_8441 IPR000659 Pyridoxamine 5'-phosphate oxidase AMED_8444 IPR005152 Lipase, secreted AMED_8444 IPR029058 Alpha/Beta hydrolase fold AMED_8445 IPR002669 Urease accessory protein UreD AMED_8446 IPR004400 Urease accessory protein UreG AMED_8446 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8446 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMED_8447 IPR002639 Urease accessory protein UreF AMED_8447 IPR038277 UreF domain superfamily AMED_8448 IPR011612 Urease alpha-subunit, N-terminal domain AMED_8448 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_8448 IPR029754 Urease nickel binding site AMED_8448 IPR017951 Urease alpha subunit, C-terminal AMED_8448 IPR017950 Urease active site AMED_8448 IPR005848 Urease, alpha subunit AMED_8448 IPR006680 Amidohydrolase-related AMED_8448 IPR032466 Metal-dependent hydrolase AMED_8449 IPR036461 Urease, beta subunit superfamily AMED_8449 IPR002019 Urease, beta subunit AMED_8450 IPR036463 Urease, gamma subunit superfamily AMED_8450 IPR012010 Urease, gamma subunit AMED_8450 IPR002026 Urease, gamma/gamma-beta subunit AMED_8451 IPR019810 Citrate synthase active site AMED_8451 IPR016143 Citrate synthase-like, small alpha subdomain AMED_8451 IPR016142 Citrate synthase-like, large alpha subdomain AMED_8451 IPR036969 Citrate synthase superfamily AMED_8451 IPR002020 Citrate synthase AMED_8453 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_8453 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_8453 IPR036291 NAD(P)-binding domain superfamily AMED_8453 IPR000073 Alpha/beta hydrolase fold-1 AMED_8453 IPR029058 Alpha/Beta hydrolase fold AMED_8454 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_8454 IPR017871 ABC transporter, conserved site AMED_8454 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8454 IPR025302 Domain of unknown function DUF4162 AMED_8454 IPR003439 ABC transporter-like AMED_8454 IPR003593 AAA+ ATPase domain AMED_8456 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8456 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_8456 IPR007895 MASE1 AMED_8456 IPR005467 Histidine kinase domain AMED_8456 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8457 IPR000792 Transcription regulator LuxR, C-terminal AMED_8457 IPR011006 CheY-like superfamily AMED_8457 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8457 IPR001789 Signal transduction response regulator, receiver domain AMED_8458 IPR001466 Beta-lactamase-related AMED_8458 IPR012338 Beta-lactamase/transpeptidase-like AMED_8460 IPR000192 Aminotransferase class V domain AMED_8460 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8460 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type AMED_8460 IPR022278 Phosphoserine aminotransferase AMED_8460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_8461 IPR018584 Glycosyltransferase family 87 AMED_8462 IPR032466 Metal-dependent hydrolase AMED_8462 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_8462 IPR005920 Imidazolonepropionase AMED_8462 IPR006680 Amidohydrolase-related AMED_8463 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_8463 IPR017871 ABC transporter, conserved site AMED_8463 IPR003439 ABC transporter-like AMED_8463 IPR025857 MacB-like periplasmic core domain AMED_8463 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8463 IPR003593 AAA+ ATPase domain AMED_8463 IPR003838 ABC transporter permease protein domain AMED_8464 IPR003593 AAA+ ATPase domain AMED_8464 IPR017871 ABC transporter, conserved site AMED_8464 IPR003838 ABC transporter permease protein domain AMED_8464 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMED_8464 IPR025857 MacB-like periplasmic core domain AMED_8464 IPR003439 ABC transporter-like AMED_8464 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8467 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8467 IPR039420 Transcriptional regulatory protein WalR-like AMED_8467 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8467 IPR011006 CheY-like superfamily AMED_8467 IPR001789 Signal transduction response regulator, receiver domain AMED_8468 IPR005467 Histidine kinase domain AMED_8468 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8468 IPR003660 HAMP domain AMED_8468 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8468 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8468 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8468 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8469 IPR021421 Protein of unknown function DUF3071 AMED_8473 IPR029064 50S ribosomal protein L30e-like AMED_8473 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMED_8473 IPR029028 Alpha/beta knot methyltransferases AMED_8473 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_8476 IPR002051 Haem oxygenase AMED_8476 IPR016053 Haem oxygenase-like AMED_8476 IPR016084 Haem oxygenase-like, multi-helical AMED_8476 IPR018207 Haem oxygenase conserved site AMED_8477 IPR019831 Manganese/iron superoxide dismutase, N-terminal AMED_8477 IPR001189 Manganese/iron superoxide dismutase AMED_8477 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AMED_8477 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AMED_8477 IPR019832 Manganese/iron superoxide dismutase, C-terminal AMED_8477 IPR019833 Manganese/iron superoxide dismutase, binding site AMED_8478 IPR001447 Arylamine N-acetyltransferase AMED_8478 IPR038765 Papain-like cysteine peptidase superfamily AMED_8479 IPR036259 MFS transporter superfamily AMED_8479 IPR020846 Major facilitator superfamily domain AMED_8479 IPR010290 Transmembrane secretion effector AMED_8480 IPR036390 Winged helix DNA-binding domain superfamily AMED_8480 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8480 IPR000835 MarR-type HTH domain AMED_8480 IPR023187 Transcriptional regulator MarR-type, conserved site AMED_8482 IPR006043 Xanthine/uracil/vitamin C permease AMED_8482 IPR026033 Azaguanine-like transporters AMED_8485 IPR021391 Protein of unknown function DUF3027 AMED_8487 IPR036259 MFS transporter superfamily AMED_8487 IPR011701 Major facilitator superfamily AMED_8489 IPR012156 Cold shock, CspA AMED_8489 IPR012340 Nucleic acid-binding, OB-fold AMED_8489 IPR011129 Cold shock domain AMED_8489 IPR019844 Cold-shock (CSD) domain AMED_8489 IPR002059 Cold-shock protein, DNA-binding AMED_8491 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_8491 IPR036412 HAD-like superfamily AMED_8491 IPR006439 HAD hydrolase, subfamily IA AMED_8491 IPR041492 Haloacid dehalogenase-like hydrolase AMED_8491 IPR023214 HAD superfamily AMED_8491 IPR037512 Phosphoglycolate phosphatase, prokaryotic AMED_8491 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMED_8492 IPR004111 Tetracycline repressor TetR, C-terminal AMED_8492 IPR001647 DNA-binding HTH domain, TetR-type AMED_8492 IPR003012 Tetracycline transcriptional regulator, TetR AMED_8492 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_8492 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_8492 IPR009057 Homeobox-like domain superfamily AMED_8493 IPR009078 Ferritin-like superfamily AMED_8493 IPR033908 R2-like ligand binding oxidase AMED_8493 IPR012348 Ribonucleotide reductase-like AMED_8493 IPR000358 Ribonucleotide reductase small subunit family AMED_8494 IPR025110 AMP-binding enzyme, C-terminal domain AMED_8494 IPR000873 AMP-dependent synthetase/ligase AMED_8494 IPR020845 AMP-binding, conserved site AMED_8496 IPR014284 RNA polymerase sigma-70 like domain AMED_8496 IPR007627 RNA polymerase sigma-70 region 2 AMED_8496 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8496 IPR013325 RNA polymerase sigma factor, region 2 AMED_8496 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8496 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8496 IPR014325 RNA polymerase sigma-E factor, actinobacteria AMED_8496 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_8497 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily AMED_8497 IPR013783 Immunoglobulin-like fold AMED_8497 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMED_8497 IPR014756 Immunoglobulin E-set AMED_8497 IPR036966 Carbohydrate-binding module 3 superfamily AMED_8497 IPR005102 Carbohydrate binding X2 domain AMED_8497 IPR001956 Carbohydrate-binding module 3 AMED_8498 IPR037219 Peptidase M41-like AMED_8498 IPR000642 Peptidase M41 AMED_8498 IPR003593 AAA+ ATPase domain AMED_8498 IPR003960 ATPase, AAA-type, conserved site AMED_8498 IPR011546 Peptidase M41, FtsH extracellular AMED_8498 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8498 IPR005936 Peptidase, FtsH AMED_8498 IPR041569 AAA ATPase, AAA+ lid domain AMED_8498 IPR003959 ATPase, AAA-type, core AMED_8506 IPR003719 Phenazine biosynthesis PhzF protein AMED_8507 IPR031308 Uncharacterised conserved protein UCP028777 AMED_8507 IPR005185 Inner membrane component domain AMED_8508 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AMED_8508 IPR029052 Metallo-dependent phosphatase-like AMED_8508 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_8509 IPR023214 HAD superfamily AMED_8509 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMED_8509 IPR036412 HAD-like superfamily AMED_8510 IPR002355 Multicopper oxidase, copper-binding site AMED_8510 IPR033138 Multicopper oxidases, conserved site AMED_8510 IPR011707 Multicopper oxidase, type 3 AMED_8510 IPR008972 Cupredoxin AMED_8510 IPR011706 Multicopper oxidase, type 2 AMED_8511 IPR008995 Molybdate/tungstate binding, C-terminal AMED_8511 IPR015852 ABC transporter, molybdenum import, ModC AMED_8511 IPR005116 Transport-associated OB, type 1 AMED_8511 IPR017871 ABC transporter, conserved site AMED_8511 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8511 IPR003593 AAA+ ATPase domain AMED_8511 IPR003439 ABC transporter-like AMED_8511 IPR004606 Molybdenum-pterin binding AMED_8512 IPR011867 Molybdate ABC transporter, permease protein AMED_8512 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8512 IPR006469 NifC-like ABC-type porter AMED_8512 IPR035906 MetI-like superfamily AMED_8513 IPR005950 Molybdate ABC transporter, substrate-binding protein AMED_8515 IPR000835 MarR-type HTH domain AMED_8515 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8515 IPR011991 ArsR-like helix-turn-helix domain AMED_8515 IPR036390 Winged helix DNA-binding domain superfamily AMED_8516 IPR007197 Radical SAM AMED_8516 IPR010505 Molybdenum cofactor synthesis C-terminal AMED_8516 IPR013483 Molybdenum cofactor biosynthesis protein A AMED_8516 IPR006638 Elp3/MiaB/NifB AMED_8516 IPR013785 Aldolase-type TIM barrel AMED_8516 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AMED_8518 IPR010618 Transglycosylase-like AMED_8518 IPR023346 Lysozyme-like domain superfamily AMED_8521 IPR003448 Molybdopterin biosynthesis MoaE AMED_8521 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AMED_8522 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AMED_8522 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AMED_8522 IPR023045 Molybdenum cofactor biosynthesis C AMED_8523 IPR015884 Malic enzyme, conserved site AMED_8523 IPR002912 ACT domain AMED_8523 IPR037062 Malic enzyme, N-terminal domain superfamily AMED_8523 IPR012301 Malic enzyme, N-terminal domain AMED_8523 IPR001891 Malic oxidoreductase AMED_8523 IPR036291 NAD(P)-binding domain superfamily AMED_8523 IPR012302 Malic enzyme, NAD-binding AMED_8528 IPR004942 Roadblock/LAMTOR2 domain AMED_8531 IPR004942 Roadblock/LAMTOR2 domain AMED_8532 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8532 IPR013727 Two-component sensor kinase, N-terminal AMED_8532 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8532 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8532 IPR005467 Histidine kinase domain AMED_8532 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8532 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8533 IPR015168 SsuA/THI5-like AMED_8533 IPR010067 Aliphatic sulfonates-binding protein AMED_8533 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_8534 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8534 IPR035906 MetI-like superfamily AMED_8534 IPR005889 Nitrate transport permease AMED_8535 IPR035906 MetI-like superfamily AMED_8535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8536 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8536 IPR017871 ABC transporter, conserved site AMED_8536 IPR003439 ABC transporter-like AMED_8536 IPR003593 AAA+ ATPase domain AMED_8537 IPR012000 Thiamine pyrophosphate enzyme, central domain AMED_8537 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMED_8537 IPR000399 TPP-binding enzyme, conserved site AMED_8537 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMED_8537 IPR029061 Thiamin diphosphate-binding fold AMED_8537 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_8539 IPR035986 PKD domain superfamily AMED_8539 IPR036852 Peptidase S8/S53 domain superfamily AMED_8539 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_8539 IPR022409 PKD/Chitinase domain AMED_8539 IPR007280 Peptidase, C-terminal, archaeal/bacterial AMED_8539 IPR013783 Immunoglobulin-like fold AMED_8539 IPR015366 Peptidase S53, activation domain AMED_8539 IPR030400 Sedolisin domain AMED_8539 IPR000601 PKD domain AMED_8543 IPR036822 Copper homeostasis (CutC) domain superfamily AMED_8543 IPR023648 Copper homeostasis CutC domain AMED_8543 IPR005627 Copper homeostasis protein CutC AMED_8547 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8547 IPR011332 Zinc-binding ribosomal protein AMED_8547 IPR001650 Helicase, C-terminal AMED_8547 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_8547 IPR006935 Helicase/UvrB, N-terminal AMED_8551 IPR010196 o-Succinylbenzoate synthase, MenC type1 AMED_8551 IPR041338 OSBS, enolase-like N-terminal domain AMED_8551 IPR036849 Enolase-like, C-terminal domain superfamily AMED_8551 IPR029017 Enolase-like, N-terminal AMED_8551 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_8551 IPR029065 Enolase C-terminal domain-like AMED_8554 IPR027409 GroEL-like apical domain superfamily AMED_8554 IPR027413 GroEL-like equatorial domain superfamily AMED_8554 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMED_8554 IPR002423 Chaperonin Cpn60/TCP-1 family AMED_8554 IPR001844 Chaperonin Cpn60 AMED_8554 IPR018370 Chaperonin Cpn60, conserved site AMED_8555 IPR036249 Thioredoxin-like superfamily AMED_8555 IPR017441 Protein kinase, ATP binding site AMED_8555 IPR000719 Protein kinase domain AMED_8555 IPR011009 Protein kinase-like domain superfamily AMED_8555 IPR012336 Thioredoxin-like fold AMED_8556 IPR012156 Cold shock, CspA AMED_8556 IPR019844 Cold-shock (CSD) domain AMED_8556 IPR002059 Cold-shock protein, DNA-binding AMED_8556 IPR012340 Nucleic acid-binding, OB-fold AMED_8556 IPR011129 Cold shock domain AMED_8559 IPR005111 MoeA, C-terminal, domain IV AMED_8559 IPR038987 Molybdopterin biosynthesis protein MoeA-like AMED_8559 IPR005110 MoeA, N-terminal and linker domain AMED_8559 IPR036135 MoeA, N-terminal and linker domain superfamily AMED_8559 IPR036688 MoeA, C-terminal, domain IV superfamily AMED_8559 IPR001453 MoaB/Mog domain AMED_8559 IPR036425 MoaB/Mog-like domain superfamily AMED_8562 IPR007341 Transglycosylase-associated protein AMED_8563 IPR003817 Phosphatidylserine decarboxylase-related AMED_8563 IPR033175 Phosphatidylserine decarboxylase, archaeal-type AMED_8564 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AMED_8564 IPR000462 CDP-alcohol phosphatidyltransferase AMED_8565 IPR003960 ATPase, AAA-type, conserved site AMED_8565 IPR037219 Peptidase M41-like AMED_8565 IPR000642 Peptidase M41 AMED_8565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8565 IPR005936 Peptidase, FtsH AMED_8565 IPR003593 AAA+ ATPase domain AMED_8565 IPR041569 AAA ATPase, AAA+ lid domain AMED_8565 IPR003959 ATPase, AAA-type, core AMED_8568 IPR023635 Peptide deformylase AMED_8568 IPR036821 Peptide deformylase superfamily AMED_8569 IPR014718 Glycoside hydrolase-type carbohydrate-binding AMED_8569 IPR000165 Glucoamylase AMED_8569 IPR008928 Six-hairpin glycosidase superfamily AMED_8569 IPR011613 GH15-like domain AMED_8569 IPR011013 Galactose mutarotase-like domain superfamily AMED_8569 IPR012341 Six-hairpin glycosidase-like superfamily AMED_8569 IPR006425 Glucoamylase, bacterial AMED_8569 IPR015220 Glucodextranase, N-terminal AMED_8570 IPR001478 PDZ domain AMED_8570 IPR009003 Peptidase S1, PA clan AMED_8570 IPR001940 Peptidase S1C AMED_8570 IPR036034 PDZ superfamily AMED_8571 IPR025747 ThiC-associated domain AMED_8571 IPR038521 ThiC/Bza superfamily AMED_8571 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AMED_8571 IPR037509 Phosphomethylpyrimidine synthase AMED_8572 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AMED_8572 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AMED_8572 IPR029056 Ribokinase-like AMED_8574 IPR029056 Ribokinase-like AMED_8574 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AMED_8574 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AMED_8575 IPR036390 Winged helix DNA-binding domain superfamily AMED_8575 IPR000835 MarR-type HTH domain AMED_8575 IPR023187 Transcriptional regulator MarR-type, conserved site AMED_8575 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8576 IPR008867 Thiazole synthase AMED_8576 IPR033983 Thiazole synthase ThiG AMED_8576 IPR013785 Aldolase-type TIM barrel AMED_8578 IPR008867 Thiazole synthase AMED_8578 IPR012727 Glycine oxidase ThiO AMED_8578 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_8578 IPR006076 FAD dependent oxidoreductase AMED_8578 IPR013785 Aldolase-type TIM barrel AMED_8578 IPR033983 Thiazole synthase ThiG AMED_8579 IPR013785 Aldolase-type TIM barrel AMED_8579 IPR036206 Thiamin phosphate synthase superfamily AMED_8579 IPR022998 Thiamine phosphate synthase/TenI AMED_8579 IPR034291 Thiamine phosphate synthase AMED_8581 IPR002912 ACT domain AMED_8581 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMED_8581 IPR001926 Pyridoxal-phosphate dependent enzyme AMED_8581 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMED_8581 IPR005789 Threonine dehydratase, catabolic AMED_8582 IPR011701 Major facilitator superfamily AMED_8582 IPR020846 Major facilitator superfamily domain AMED_8582 IPR036259 MFS transporter superfamily AMED_8583 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_8583 IPR000524 Transcription regulator HTH, GntR AMED_8583 IPR011663 UbiC transcription regulator-associated AMED_8583 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8583 IPR036390 Winged helix DNA-binding domain superfamily AMED_8584 IPR017932 Glutamine amidotransferase type 2 domain AMED_8584 IPR001347 Sugar isomerase (SIS) AMED_8584 IPR035466 GlmS/AgaS, SIS domain 1 AMED_8584 IPR035490 GlmS/FrlB, SIS domain 2 AMED_8584 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AMED_8584 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_8585 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type AMED_8587 IPR036130 Pyridoxine 5'-phosphate synthase AMED_8587 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AMED_8587 IPR013785 Aldolase-type TIM barrel AMED_8593 IPR013026 Tetratricopeptide repeat-containing domain AMED_8593 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8593 IPR019734 Tetratricopeptide repeat AMED_8593 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8593 IPR002182 NB-ARC AMED_8593 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8593 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8593 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8593 IPR005158 Bacterial transcriptional activator domain AMED_8594 IPR008775 Phytanoyl-CoA dioxygenase AMED_8594 IPR012774 Ectoine dioxygenase AMED_8595 IPR014710 RmlC-like jelly roll fold AMED_8595 IPR011051 RmlC-like cupin domain superfamily AMED_8595 IPR010462 Ectoine synthase AMED_8596 IPR005814 Aminotransferase class-III AMED_8596 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8596 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_8596 IPR012773 Ectoine biosynthetic protein AMED_8596 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8596 IPR004637 2,4-diaminobutyrate 4-transaminase AMED_8597 IPR012772 L-2,4-diaminobutyric acid acetyltransferase AMED_8597 IPR000182 GNAT domain AMED_8597 IPR016181 Acyl-CoA N-acyltransferase AMED_8598 IPR019894 Patatin-related protein AMED_8598 IPR002641 Patatin-like phospholipase domain AMED_8598 IPR024282 Domain of unknown function DUF3376 AMED_8598 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_8599 IPR013149 Alcohol dehydrogenase, C-terminal AMED_8599 IPR011032 GroES-like superfamily AMED_8599 IPR020843 Polyketide synthase, enoylreductase domain AMED_8599 IPR036291 NAD(P)-binding domain superfamily AMED_8599 IPR013154 Alcohol dehydrogenase, N-terminal AMED_8600 IPR036390 Winged helix DNA-binding domain superfamily AMED_8600 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8600 IPR002577 Helix-turn-helix, HxlR type AMED_8601 IPR016991 Protein of unknown function UCP032178 AMED_8601 IPR007383 Protein of unknown function DUF445 AMED_8604 IPR010445 Lipopolysaccharide assembly protein A domain AMED_8609 IPR011957 Benzoate-CoA ligase family AMED_8609 IPR000873 AMP-dependent synthetase/ligase AMED_8609 IPR025110 AMP-binding enzyme, C-terminal domain AMED_8610 IPR012348 Ribonucleotide reductase-like AMED_8610 IPR009078 Ferritin-like superfamily AMED_8610 IPR017635 Benzoyl-CoA oxygenase, B subunit AMED_8611 IPR017633 Benzoyl-CoA-dihydrodiol lyase AMED_8611 IPR029045 ClpP/crotonase-like domain superfamily AMED_8611 IPR001753 Enoyl-CoA hydratase/isomerase AMED_8614 IPR026891 Fibronectin type III-like domain AMED_8614 IPR008979 Galactose-binding-like domain superfamily AMED_8614 IPR019800 Glycoside hydrolase, family 3, active site AMED_8614 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_8614 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_8614 IPR011658 PA14 domain AMED_8614 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_8614 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_8614 IPR037524 PA14/GLEYA domain AMED_8614 IPR013783 Immunoglobulin-like fold AMED_8614 IPR017853 Glycoside hydrolase superfamily AMED_8616 IPR011991 ArsR-like helix-turn-helix domain AMED_8616 IPR036390 Winged helix DNA-binding domain superfamily AMED_8616 IPR002577 Helix-turn-helix, HxlR type AMED_8616 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8621 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_8621 IPR011527 ABC transporter type 1, transmembrane domain AMED_8621 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8621 IPR039421 Type I protein exporter AMED_8621 IPR003593 AAA+ ATPase domain AMED_8621 IPR003439 ABC transporter-like AMED_8621 IPR017871 ABC transporter, conserved site AMED_8622 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMED_8622 IPR017630 4-oxalocrotonate decarboxylase AMED_8623 IPR023793 2-keto-4-pentenoate hydratase AMED_8623 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMED_8623 IPR011234 Fumarylacetoacetase-like, C-terminal AMED_8624 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMED_8624 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMED_8624 IPR004361 Glyoxalase I AMED_8624 IPR018146 Glyoxalase I, conserved site AMED_8624 IPR037523 Vicinal oxygen chelate (VOC) domain AMED_8626 IPR003781 CoA-binding AMED_8626 IPR036291 NAD(P)-binding domain superfamily AMED_8629 IPR000638 Gas vesicle protein GvpA AMED_8629 IPR018493 Gas vesicle protein GvpA, conserved site AMED_8630 IPR000638 Gas vesicle protein GvpA AMED_8630 IPR007805 Gas vesicle protein GvpK AMED_8631 IPR018493 Gas vesicle protein GvpA, conserved site AMED_8631 IPR000638 Gas vesicle protein GvpA AMED_8633 IPR018493 Gas vesicle protein GvpA, conserved site AMED_8633 IPR000638 Gas vesicle protein GvpA AMED_8635 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8635 IPR039420 Transcriptional regulatory protein WalR-like AMED_8635 IPR001789 Signal transduction response regulator, receiver domain AMED_8635 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8635 IPR011006 CheY-like superfamily AMED_8636 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8636 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8636 IPR003660 HAMP domain AMED_8636 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8636 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8636 IPR005467 Histidine kinase domain AMED_8636 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8637 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMED_8637 IPR029062 Class I glutamine amidotransferase-like AMED_8637 IPR017929 CobB/CobQ glutamine amidotransferase AMED_8637 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8637 IPR011698 CobB/CobQ-like glutamine amidotransferase AMED_8637 IPR004459 Cobyric acid synthase CobQ AMED_8637 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 AMED_8638 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AMED_8638 IPR013221 Mur ligase, central AMED_8638 IPR036565 Mur-like, catalytic domain superfamily AMED_8638 IPR004101 Mur ligase, C-terminal AMED_8638 IPR036615 Mur ligase, C-terminal domain superfamily AMED_8639 IPR001227 Acyl transferase domain superfamily AMED_8639 IPR036736 ACP-like superfamily AMED_8639 IPR014043 Acyl transferase AMED_8639 IPR013154 Alcohol dehydrogenase, N-terminal AMED_8639 IPR036347 Erythronolide synthase, docking domain superfamily AMED_8639 IPR015357 Erythronolide synthase, docking AMED_8639 IPR011032 GroES-like superfamily AMED_8639 IPR018201 Beta-ketoacyl synthase, active site AMED_8639 IPR014031 Beta-ketoacyl synthase, C-terminal AMED_8639 IPR014030 Beta-ketoacyl synthase, N-terminal AMED_8639 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMED_8639 IPR013968 Polyketide synthase, ketoreductase domain AMED_8639 IPR032821 Ketoacyl-synthetase, C-terminal extension AMED_8639 IPR016039 Thiolase-like AMED_8639 IPR006162 Phosphopantetheine attachment site AMED_8639 IPR036291 NAD(P)-binding domain superfamily AMED_8639 IPR009081 Phosphopantetheine binding ACP domain AMED_8639 IPR015083 Polyketide synthase, docking domain AMED_8639 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMED_8639 IPR020843 Polyketide synthase, enoylreductase domain AMED_8639 IPR042104 Polyketide synthase, dehydratase domain superfamily AMED_8639 IPR020807 Polyketide synthase, dehydratase domain AMED_8639 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMED_8639 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMED_8640 IPR001647 DNA-binding HTH domain, TetR-type AMED_8640 IPR009057 Homeobox-like domain superfamily AMED_8640 IPR041646 IcaR, C-terminal AMED_8642 IPR003804 L-lactate permease AMED_8643 IPR039356 Metal-dependent nucleoside 5'-monophosphatase AMED_8643 IPR022971 5'-deoxynucleotidase YfbR AMED_8643 IPR003607 HD/PDEase domain AMED_8644 IPR013325 RNA polymerase sigma factor, region 2 AMED_8644 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8644 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8644 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8644 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8644 IPR014284 RNA polymerase sigma-70 like domain AMED_8644 IPR007627 RNA polymerase sigma-70 region 2 AMED_8645 IPR005545 YCII-related AMED_8645 IPR011008 Dimeric alpha-beta barrel AMED_8646 IPR005545 YCII-related AMED_8646 IPR011008 Dimeric alpha-beta barrel AMED_8649 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8649 IPR003660 HAMP domain AMED_8649 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8649 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8649 IPR006290 Heavy metal sensor kinase AMED_8649 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8649 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8649 IPR005467 Histidine kinase domain AMED_8657 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8657 IPR032710 NTF2-like domain superfamily AMED_8657 IPR037401 SnoaL-like domain AMED_8657 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8657 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8657 IPR007627 RNA polymerase sigma-70 region 2 AMED_8657 IPR013325 RNA polymerase sigma factor, region 2 AMED_8657 IPR014284 RNA polymerase sigma-70 like domain AMED_8662 IPR023828 Peptidase S8, subtilisin, Ser-active site AMED_8662 IPR000209 Peptidase S8/S53 domain AMED_8662 IPR036852 Peptidase S8/S53 domain superfamily AMED_8662 IPR015366 Peptidase S53, activation domain AMED_8662 IPR030400 Sedolisin domain AMED_8663 IPR012334 Pectin lyase fold AMED_8665 IPR009061 Putative DNA-binding domain superfamily AMED_8665 IPR000551 MerR-type HTH domain AMED_8669 IPR001830 Glycosyl transferase, family 20 AMED_8673 IPR029058 Alpha/Beta hydrolase fold AMED_8673 IPR002469 Dipeptidylpeptidase IV, N-terminal domain AMED_8673 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMED_8673 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMED_8674 IPR014284 RNA polymerase sigma-70 like domain AMED_8674 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_8674 IPR039425 RNA polymerase sigma-70 like AMED_8674 IPR007627 RNA polymerase sigma-70 region 2 AMED_8674 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8674 IPR013325 RNA polymerase sigma factor, region 2 AMED_8674 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8674 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8676 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AMED_8676 IPR004504 DNA repair protein RadA AMED_8676 IPR014774 KaiC-like domain AMED_8676 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8676 IPR020568 Ribosomal protein S5 domain 2-type fold AMED_8676 IPR003593 AAA+ ATPase domain AMED_8676 IPR041166 LapB, rubredoxin metal binding domain AMED_8676 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMED_8678 IPR003711 CarD-like/TRCF domain AMED_8678 IPR042215 CarD-like, C-terminal domain AMED_8678 IPR036101 CarD-like/TRCF domain superfamily AMED_8679 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AMED_8679 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8679 IPR034683 Cytidylyltransferase IspD/TarI AMED_8679 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMED_8680 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily AMED_8680 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AMED_8680 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AMED_8684 IPR015803 Cysteine-tRNA ligase AMED_8684 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AMED_8684 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AMED_8684 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_8684 IPR032678 tRNA synthetases class I, catalytic domain AMED_8684 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_8685 IPR029064 50S ribosomal protein L30e-like AMED_8685 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AMED_8685 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMED_8685 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMED_8685 IPR004441 RNA methyltransferase TrmH family AMED_8685 IPR029028 Alpha/beta knot methyltransferases AMED_8686 IPR004299 Membrane bound O-acyl transferase, MBOAT AMED_8686 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AMED_8686 IPR028362 Alginate O-acetyltransferase AlgI AMED_8692 IPR001303 Class II aldolase/adducin N-terminal AMED_8692 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMED_8695 IPR016991 Protein of unknown function UCP032178 AMED_8695 IPR007383 Protein of unknown function DUF445 AMED_8696 IPR001626 ABC transporter, TroCD-like AMED_8696 IPR037294 ABC transporter, BtuC-like AMED_8697 IPR003439 ABC transporter-like AMED_8697 IPR017882 Zinc import ATP-binding protein ZnuC AMED_8697 IPR003593 AAA+ ATPase domain AMED_8697 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8698 IPR006127 Periplasmic solute binding protein, ZnuA-like AMED_8698 IPR006129 Adhesin B AMED_8698 IPR006128 Adhesion lipoprotein AMED_8699 IPR028082 Periplasmic binding protein-like I AMED_8699 IPR000843 LacI-type HTH domain AMED_8699 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_8700 IPR001765 Carbonic anhydrase AMED_8700 IPR036874 Carbonic anhydrase superfamily AMED_8701 IPR010610 Domain of unknown function DUF1205 AMED_8702 IPR003265 HhH-GPD domain AMED_8702 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AMED_8702 IPR000445 Helix-hairpin-helix motif AMED_8702 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMED_8702 IPR011257 DNA glycosylase AMED_8705 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMED_8705 IPR042097 Aminopeptidase N-like , N-terminal AMED_8705 IPR024571 ERAP1-like C-terminal domain AMED_8705 IPR012778 Peptidase M1, aminopeptidase AMED_8705 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMED_8706 IPR041569 AAA ATPase, AAA+ lid domain AMED_8706 IPR005936 Peptidase, FtsH AMED_8706 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8706 IPR003593 AAA+ ATPase domain AMED_8706 IPR011546 Peptidase M41, FtsH extracellular AMED_8706 IPR000642 Peptidase M41 AMED_8706 IPR037219 Peptidase M41-like AMED_8706 IPR003960 ATPase, AAA-type, conserved site AMED_8706 IPR003959 ATPase, AAA-type, core AMED_8707 IPR011008 Dimeric alpha-beta barrel AMED_8707 IPR007138 Antibiotic biosynthesis monooxygenase domain AMED_8708 IPR026591 Sirtuin, catalytic core small domain superfamily AMED_8708 IPR003000 Sirtuin family AMED_8708 IPR028628 Sirtuin, class U AMED_8708 IPR026590 Sirtuin family, catalytic core domain AMED_8708 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMED_8719 IPR003439 ABC transporter-like AMED_8719 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8719 IPR003593 AAA+ ATPase domain AMED_8719 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA AMED_8719 IPR025302 Domain of unknown function DUF4162 AMED_8719 IPR017871 ABC transporter, conserved site AMED_8720 IPR000412 ABC-2 transporter AMED_8720 IPR013525 ABC-2 type transporter AMED_8721 IPR000792 Transcription regulator LuxR, C-terminal AMED_8721 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8721 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8721 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8721 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8723 IPR033693 Pyroglutamyl peptidase I, Glu active site AMED_8723 IPR033694 Pyroglutamyl peptidase I, Cys active site AMED_8723 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily AMED_8723 IPR029762 Pyroglutamyl peptidase I, bacterial-type AMED_8723 IPR000816 Peptidase C15, pyroglutamyl peptidase I AMED_8723 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMED_8725 IPR042039 HscA chaperone, nucleotide-binding domain AMED_8725 IPR010236 ISC system FeS cluster assembly, HscA chaperone AMED_8725 IPR018181 Heat shock protein 70, conserved site AMED_8725 IPR013126 Heat shock protein 70 family AMED_8725 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMED_8725 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMED_8726 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_8726 IPR039554 HigA2-like, helix-turn-helix domain AMED_8726 IPR001387 Cro/C1-type helix-turn-helix domain AMED_8729 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8729 IPR004176 Clp, N-terminal AMED_8729 IPR019489 Clp ATPase, C-terminal AMED_8729 IPR036628 Clp, N-terminal domain superfamily AMED_8729 IPR041546 ClpA/ClpB, AAA lid domain AMED_8729 IPR018368 ClpA/B, conserved site 1 AMED_8729 IPR003593 AAA+ ATPase domain AMED_8729 IPR003959 ATPase, AAA-type, core AMED_8729 IPR001270 ClpA/B family AMED_8729 IPR001943 UVR domain AMED_8733 IPR042254 Lsr2, DNA binding domain AMED_8733 IPR042261 Lsr2, dimerization domain AMED_8733 IPR024412 Lsr2 AMED_8734 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMED_8734 IPR012340 Nucleic acid-binding, OB-fold AMED_8734 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMED_8734 IPR002313 Lysine-tRNA ligase, class II AMED_8734 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_8734 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMED_8735 IPR013216 Methyltransferase type 11 AMED_8735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8736 IPR004619 Type III pantothenate kinase AMED_8737 IPR003190 Aspartate decarboxylase AMED_8737 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_8738 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain AMED_8738 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_8738 IPR003721 Pantoate-beta-alanine ligase AMED_8743 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator AMED_8743 IPR009061 Putative DNA-binding domain superfamily AMED_8743 IPR000551 MerR-type HTH domain AMED_8744 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AMED_8744 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AMED_8745 IPR006157 Dihydroneopterin aldolase/epimerase domain AMED_8745 IPR006156 Dihydroneopterin aldolase AMED_8746 IPR011005 Dihydropteroate synthase-like AMED_8746 IPR000489 Pterin-binding domain AMED_8746 IPR006390 Dihydropteroate synthase AMED_8747 IPR001474 GTP cyclohydrolase I AMED_8747 IPR018234 GTP cyclohydrolase I, conserved site AMED_8747 IPR020602 GTP cyclohydrolase I domain AMED_8748 IPR037219 Peptidase M41-like AMED_8748 IPR003960 ATPase, AAA-type, conserved site AMED_8748 IPR000642 Peptidase M41 AMED_8748 IPR005936 Peptidase, FtsH AMED_8748 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8748 IPR041569 AAA ATPase, AAA+ lid domain AMED_8748 IPR003959 ATPase, AAA-type, core AMED_8748 IPR003593 AAA+ ATPase domain AMED_8753 IPR029057 Phosphoribosyltransferase-like AMED_8753 IPR005904 Hypoxanthine phosphoribosyl transferase AMED_8753 IPR000836 Phosphoribosyltransferase domain AMED_8754 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AMED_8754 IPR012094 tRNA(Ile)-lysidine synthase AMED_8754 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMED_8754 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_8754 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain AMED_8756 IPR012338 Beta-lactamase/transpeptidase-like AMED_8756 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C AMED_8757 IPR008162 Inorganic pyrophosphatase AMED_8757 IPR036649 Inorganic pyrophosphatase superfamily AMED_8758 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8758 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_8758 IPR036259 MFS transporter superfamily AMED_8758 IPR020846 Major facilitator superfamily domain AMED_8758 IPR011701 Major facilitator superfamily AMED_8758 IPR036390 Winged helix DNA-binding domain superfamily AMED_8758 IPR005829 Sugar transporter, conserved site AMED_8759 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8759 IPR001085 Serine hydroxymethyltransferase AMED_8759 IPR039429 Serine hydroxymethyltransferase-like domain AMED_8759 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_8759 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMED_8759 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8760 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMED_8760 IPR020785 Ribosomal protein L11, conserved site AMED_8760 IPR000911 Ribosomal protein L11/L12 AMED_8760 IPR006519 Ribosomal protein L11, bacterial-type AMED_8760 IPR020783 Ribosomal protein L11, C-terminal AMED_8760 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMED_8760 IPR020784 Ribosomal protein L11, N-terminal AMED_8761 IPR011004 Trimeric LpxA-like superfamily AMED_8761 IPR001451 Hexapeptide repeat AMED_8761 IPR023446 Carnitine operon protein CaiE AMED_8762 IPR000834 Peptidase M14, carboxypeptidase A AMED_8762 IPR033810 Carboxypeptidase T AMED_8765 IPR011008 Dimeric alpha-beta barrel AMED_8765 IPR009799 EthD domain AMED_8777 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_8777 IPR000524 Transcription regulator HTH, GntR AMED_8777 IPR036390 Winged helix DNA-binding domain superfamily AMED_8777 IPR011663 UbiC transcription regulator-associated AMED_8777 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8780 IPR041027 FtsK alpha domain AMED_8780 IPR036390 Winged helix DNA-binding domain superfamily AMED_8780 IPR025199 DNA translocase FtsK, 4TM region AMED_8780 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8780 IPR003593 AAA+ ATPase domain AMED_8780 IPR002543 FtsK domain AMED_8780 IPR018541 FtsK gamma domain AMED_8785 IPR010998 Integrase/recombinase, N-terminal AMED_8785 IPR013762 Integrase-like, catalytic domain superfamily AMED_8785 IPR002104 Integrase, catalytic domain AMED_8785 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMED_8787 IPR003593 AAA+ ATPase domain AMED_8787 IPR001270 ClpA/B family AMED_8787 IPR012763 DNA polymerase III, subunit gamma/ tau AMED_8787 IPR022754 DNA polymerase III, gamma subunit, domain III AMED_8787 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMED_8787 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8788 IPR018095 Thymidylate kinase, conserved site AMED_8788 IPR018094 Thymidylate kinase AMED_8788 IPR039430 Thymidylate kinase-like domain AMED_8788 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8794 IPR028612 DNA topoisomerase I, type IA AMED_8794 IPR005733 DNA topoisomerase I, bacterial-type AMED_8794 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AMED_8794 IPR023405 DNA topoisomerase, type IA, core domain AMED_8794 IPR003601 DNA topoisomerase, type IA, domain 2 AMED_8794 IPR034149 DNA topoisomerase 1, TOPRIM domain AMED_8794 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMED_8794 IPR000380 DNA topoisomerase, type IA AMED_8794 IPR025589 Topoisomerase C-terminal repeat AMED_8794 IPR006171 TOPRIM domain AMED_8794 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMED_8794 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMED_8794 IPR013497 DNA topoisomerase, type IA, central AMED_8794 IPR023406 DNA topoisomerase, type IA, active site AMED_8798 IPR004131 Pyrophosphate-energised proton pump AMED_8799 IPR001650 Helicase, C-terminal AMED_8799 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8799 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMED_8799 IPR011545 DEAD/DEAH box helicase domain AMED_8799 IPR018973 DEAD/DEAH-box helicase, putative AMED_8805 IPR001482 Type II/IV secretion system protein AMED_8805 IPR022399 Helicase/secretion neighbourhood ATPase AMED_8805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8806 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8806 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like AMED_8807 IPR023214 HAD superfamily AMED_8807 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AMED_8807 IPR036412 HAD-like superfamily AMED_8808 IPR002772 Glycoside hydrolase family 3 C-terminal domain AMED_8808 IPR019800 Glycoside hydrolase, family 3, active site AMED_8808 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily AMED_8808 IPR001764 Glycoside hydrolase, family 3, N-terminal AMED_8808 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMED_8808 IPR017853 Glycoside hydrolase superfamily AMED_8809 IPR008302 Uncharacterised conserved protein UCP016719 AMED_8810 IPR012338 Beta-lactamase/transpeptidase-like AMED_8810 IPR022849 Peptidase S12, YfeW/YbbE-like AMED_8810 IPR001466 Beta-lactamase-related AMED_8811 IPR035472 RpiR-like, SIS domain AMED_8811 IPR001347 Sugar isomerase (SIS) AMED_8811 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8811 IPR000281 Helix-turn-helix protein RpiR AMED_8811 IPR009057 Homeobox-like domain superfamily AMED_8812 IPR005486 Glucokinase regulatory protein, conserved site AMED_8812 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ AMED_8812 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein AMED_8812 IPR009060 UBA-like superfamily AMED_8812 IPR001347 Sugar isomerase (SIS) AMED_8813 IPR004688 Transition metal uptake transporter nickel/cobalt AMED_8813 IPR011541 Nickel/cobalt transporter, high-affinity AMED_8815 IPR023747 Xanthine-guanine phosphoribosyltransferase AMED_8815 IPR029057 Phosphoribosyltransferase-like AMED_8815 IPR000836 Phosphoribosyltransferase domain AMED_8817 IPR025110 AMP-binding enzyme, C-terminal domain AMED_8817 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AMED_8817 IPR000873 AMP-dependent synthetase/ligase AMED_8817 IPR011904 Acetate-CoA ligase AMED_8817 IPR020845 AMP-binding, conserved site AMED_8817 IPR042099 AMP-dependent synthetase-like superfamily AMED_8821 IPR005279 Dipeptide/tripeptide permease AMED_8821 IPR036259 MFS transporter superfamily AMED_8821 IPR000109 Proton-dependent oligopeptide transporter family AMED_8821 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AMED_8821 IPR020846 Major facilitator superfamily domain AMED_8822 IPR023171 Na/H antiporter domain superfamily AMED_8822 IPR004670 Na+/H+ antiporter NhaA AMED_8824 IPR000073 Alpha/beta hydrolase fold-1 AMED_8824 IPR029058 Alpha/Beta hydrolase fold AMED_8824 IPR000639 Epoxide hydrolase-like AMED_8825 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_8825 IPR002938 FAD-binding domain AMED_8827 IPR033116 Serine proteases, trypsin family, serine active site AMED_8827 IPR001940 Peptidase S1C AMED_8827 IPR009003 Peptidase S1, PA clan AMED_8827 IPR003825 Colicin V production, CvpA AMED_8829 IPR013766 Thioredoxin domain AMED_8829 IPR017937 Thioredoxin, conserved site AMED_8829 IPR036249 Thioredoxin-like superfamily AMED_8829 IPR013740 Redoxin AMED_8829 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AMED_8830 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AMED_8830 IPR004036 Endonuclease III-like, conserved site-2 AMED_8830 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMED_8830 IPR003265 HhH-GPD domain AMED_8830 IPR011257 DNA glycosylase AMED_8830 IPR005759 Endonuclease III AMED_8830 IPR004035 Endonuclease III, iron-sulphur binding site AMED_8830 IPR000445 Helix-hairpin-helix motif AMED_8832 IPR000595 Cyclic nucleotide-binding domain AMED_8832 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8832 IPR012318 Crp-type HTH domain AMED_8832 IPR014710 RmlC-like jelly roll fold AMED_8832 IPR036390 Winged helix DNA-binding domain superfamily AMED_8832 IPR018490 Cyclic nucleotide-binding-like AMED_8841 IPR019826 Carboxylesterase type B, active site AMED_8841 IPR002018 Carboxylesterase, type B AMED_8841 IPR029058 Alpha/Beta hydrolase fold AMED_8843 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMED_8843 IPR001279 Metallo-beta-lactamase AMED_8843 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AMED_8843 IPR017782 Hydroxyacylglutathione hydrolase AMED_8843 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AMED_8850 IPR016300 Arsenical pump ATPase, ArsA/GET3 AMED_8850 IPR025723 Anion-transporting ATPase-like domain AMED_8850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8851 IPR025501 ATP binding protein MinD AMED_8851 IPR025669 AAA domain AMED_8851 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8851 IPR010223 ATP binding protein MinD, bacterial-type AMED_8852 IPR034768 WhiB-like iron-sulfur binding domain AMED_8852 IPR003482 Transcription factor WhiB AMED_8853 IPR023346 Lysozyme-like domain superfamily AMED_8853 IPR036950 Penicillin binding protein transglycosylase domain AMED_8853 IPR031376 Penicillin-binding protein, OB-like domain AMED_8853 IPR001460 Penicillin-binding protein, transpeptidase AMED_8853 IPR012338 Beta-lactamase/transpeptidase-like AMED_8853 IPR001264 Glycosyl transferase, family 51 AMED_8854 IPR011009 Protein kinase-like domain superfamily AMED_8854 IPR026954 PknH-like extracellular domain AMED_8854 IPR038232 PknH-like extracellular domain superfamily AMED_8854 IPR000719 Protein kinase domain AMED_8854 IPR017441 Protein kinase, ATP binding site AMED_8854 IPR008271 Serine/threonine-protein kinase, active site AMED_8855 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_8855 IPR029052 Metallo-dependent phosphatase-like AMED_8855 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_8856 IPR026669 Arsenite methyltransferase-like AMED_8856 IPR025714 Methyltransferase domain AMED_8856 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_8857 IPR011042 Six-bladed beta-propeller, TolB-like AMED_8857 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMED_8857 IPR029058 Alpha/Beta hydrolase fold AMED_8863 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8863 IPR001173 Glycosyltransferase 2-like AMED_8864 IPR011054 Rudiment single hybrid motif AMED_8864 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMED_8864 IPR013815 ATP-grasp fold, subdomain 1 AMED_8864 IPR016185 Pre-ATP-grasp domain superfamily AMED_8864 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase AMED_8864 IPR011761 ATP-grasp fold AMED_8866 IPR003696 Carbamoyltransferase AMED_8866 IPR031730 Carbamoyltransferase, C-terminal AMED_8866 IPR038152 Carbamoyltransferase, C-terminal domain superfamily AMED_8869 IPR015424 Pyridoxal phosphate-dependent transferase AMED_8869 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_8869 IPR002129 Pyridoxal phosphate-dependent decarboxylase AMED_8869 IPR010107 Glutamate decarboxylase AMED_8870 IPR008331 Ferritin/DPS protein domain AMED_8870 IPR012347 Ferritin-like AMED_8870 IPR009078 Ferritin-like superfamily AMED_8870 IPR023067 DNA protection during starvation protein, gammaproteobacteria AMED_8870 IPR023188 DNA-binding protein Dps, conserved site AMED_8870 IPR002177 DNA-binding protein Dps AMED_8871 IPR036102 OsmC/Ohr superfamily AMED_8871 IPR003718 OsmC/Ohr family AMED_8871 IPR019953 Organic hydroperoxide resistance protein famiy AMED_8871 IPR015946 K homology domain-like, alpha/beta AMED_8872 IPR005025 NADPH-dependent FMN reductase-like AMED_8872 IPR029039 Flavoprotein-like superfamily AMED_8873 IPR013094 Alpha/beta hydrolase fold-3 AMED_8873 IPR029058 Alpha/Beta hydrolase fold AMED_8876 IPR020846 Major facilitator superfamily domain AMED_8876 IPR011701 Major facilitator superfamily AMED_8876 IPR004638 Drug resistance transporter EmrB-like AMED_8876 IPR036259 MFS transporter superfamily AMED_8879 IPR001233 tRNA-splicing ligase, RtcB AMED_8879 IPR036025 tRNA-splicing ligase RtcB-like superfamily AMED_8882 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AMED_8882 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMED_8882 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AMED_8882 IPR012080 Aspartate-semialdehyde dehydrogenase AMED_8882 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type AMED_8882 IPR036291 NAD(P)-binding domain superfamily AMED_8882 IPR002942 RNA-binding S4 domain AMED_8883 IPR027795 CASTOR, ACT domain AMED_8883 IPR005260 Aspartate kinase, monofunctional class AMED_8883 IPR036393 Acetylglutamate kinase-like superfamily AMED_8883 IPR002912 ACT domain AMED_8883 IPR001048 Aspartate/glutamate/uridylate kinase AMED_8883 IPR001341 Aspartate kinase AMED_8883 IPR041740 Aspartokinase catalytic domain AMED_8883 IPR018042 Aspartate kinase, conserved site AMED_8886 IPR000891 Pyruvate carboxyltransferase AMED_8886 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AMED_8886 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AMED_8886 IPR005668 2-isopropylmalate synthase AMED_8886 IPR013785 Aldolase-type TIM barrel AMED_8886 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AMED_8886 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AMED_8892 IPR000847 Transcription regulator HTH, LysR AMED_8892 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8892 IPR036390 Winged helix DNA-binding domain superfamily AMED_8892 IPR005119 LysR, substrate-binding AMED_8893 IPR000620 EamA domain AMED_8894 IPR032818 DedA family AMED_8894 IPR032816 SNARE associated Golgi protein AMED_8896 IPR011008 Dimeric alpha-beta barrel AMED_8896 IPR005545 YCII-related AMED_8897 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_8897 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8897 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_8897 IPR013325 RNA polymerase sigma factor, region 2 AMED_8897 IPR007627 RNA polymerase sigma-70 region 2 AMED_8897 IPR014284 RNA polymerase sigma-70 like domain AMED_8897 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_8898 IPR003439 ABC transporter-like AMED_8898 IPR003593 AAA+ ATPase domain AMED_8898 IPR017871 ABC transporter, conserved site AMED_8898 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8898 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8899 IPR017871 ABC transporter, conserved site AMED_8899 IPR003593 AAA+ ATPase domain AMED_8899 IPR003439 ABC transporter-like AMED_8899 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMED_8899 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8900 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMED_8900 IPR035906 MetI-like superfamily AMED_8901 IPR035906 MetI-like superfamily AMED_8901 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8902 IPR000914 Solute-binding protein family 5 domain AMED_8902 IPR023765 Solute-binding protein family 5, conserved site AMED_8902 IPR030678 Peptide/nickel binding protein, MppA-type AMED_8902 IPR039424 Solute-binding protein family 5 AMED_8904 IPR001173 Glycosyltransferase 2-like AMED_8904 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8904 IPR039528 DPM1-like AMED_8908 IPR029044 Nucleotide-diphospho-sugar transferases AMED_8908 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA AMED_8908 IPR001173 Glycosyltransferase 2-like AMED_8910 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AMED_8910 IPR038200 GW domain superfamily AMED_8910 IPR025987 GW domain AMED_8911 IPR006171 TOPRIM domain AMED_8911 IPR023628 Recombination protein RecR, C4-type zinc finger AMED_8911 IPR023627 Recombination protein RecR AMED_8911 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMED_8911 IPR000093 DNA recombination protein RecR AMED_8911 IPR034137 RecR, TOPRIM domain AMED_8911 IPR015967 Recombination protein RecR, conserved site AMED_8912 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMED_8912 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMED_8914 IPR002577 Helix-turn-helix, HxlR type AMED_8914 IPR036390 Winged helix DNA-binding domain superfamily AMED_8914 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8915 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_8915 IPR019920 F420-binding domain, putative AMED_8915 IPR012349 FMN-binding split barrel AMED_8916 IPR001584 Integrase, catalytic core AMED_8916 IPR012337 Ribonuclease H-like superfamily AMED_8916 IPR036397 Ribonuclease H superfamily AMED_8916 IPR025948 HTH-like domain AMED_8917 IPR009057 Homeobox-like domain superfamily AMED_8917 IPR002514 Transposase IS3/IS911family AMED_8918 IPR003593 AAA+ ATPase domain AMED_8918 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMED_8918 IPR022754 DNA polymerase III, gamma subunit, domain III AMED_8918 IPR012763 DNA polymerase III, subunit gamma/ tau AMED_8918 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8925 IPR003439 ABC transporter-like AMED_8925 IPR003593 AAA+ ATPase domain AMED_8925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8925 IPR017871 ABC transporter, conserved site AMED_8926 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8926 IPR035906 MetI-like superfamily AMED_8928 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMED_8929 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMED_8929 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMED_8929 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMED_8929 IPR005467 Histidine kinase domain AMED_8929 IPR003660 HAMP domain AMED_8929 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8929 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8930 IPR011006 CheY-like superfamily AMED_8930 IPR039420 Transcriptional regulatory protein WalR-like AMED_8930 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8930 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_8930 IPR001789 Signal transduction response regulator, receiver domain AMED_8932 IPR016381 Signal transduction histidine kinase, DegS AMED_8932 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_8932 IPR008595 Sensor DegS AMED_8932 IPR005467 Histidine kinase domain AMED_8932 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_8932 IPR003594 Histidine kinase/HSP90-like ATPase AMED_8933 IPR011006 CheY-like superfamily AMED_8933 IPR001789 Signal transduction response regulator, receiver domain AMED_8933 IPR000792 Transcription regulator LuxR, C-terminal AMED_8933 IPR016032 Signal transduction response regulator, C-terminal effector AMED_8936 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_8936 IPR009057 Homeobox-like domain superfamily AMED_8936 IPR001647 DNA-binding HTH domain, TetR-type AMED_8936 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) AMED_8937 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AMED_8937 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMED_8937 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_8937 IPR036291 NAD(P)-binding domain superfamily AMED_8937 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_8937 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_8937 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC AMED_8938 IPR000801 Putative esterase AMED_8938 IPR029058 Alpha/Beta hydrolase fold AMED_8938 IPR013207 LGFP AMED_8941 IPR017441 Protein kinase, ATP binding site AMED_8941 IPR011009 Protein kinase-like domain superfamily AMED_8941 IPR000719 Protein kinase domain AMED_8941 IPR008271 Serine/threonine-protein kinase, active site AMED_8941 IPR005543 PASTA domain AMED_8943 IPR015655 Protein phosphatase 2C family AMED_8943 IPR036457 PPM-type phosphatase domain superfamily AMED_8943 IPR001932 PPM-type phosphatase domain AMED_8946 IPR023839 Firmicutes EssC, C-terminal AMED_8946 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8946 IPR002543 FtsK domain AMED_8953 IPR019079 Capsule synthesis protein, CapA AMED_8954 IPR032710 NTF2-like domain superfamily AMED_8954 IPR013100 Limonene-1,2-epoxide hydrolase AMED_8955 IPR042098 Taurine dioxygenase TauD-like superfamily AMED_8955 IPR006189 CHASE domain AMED_8955 IPR003819 TauD/TfdA-like domain AMED_8959 IPR016040 NAD(P)-binding domain AMED_8959 IPR036291 NAD(P)-binding domain superfamily AMED_8961 IPR028883 tRNA-specific adenosine deaminase AMED_8961 IPR016193 Cytidine deaminase-like AMED_8961 IPR002125 Cytidine and deoxycytidylate deaminase domain AMED_8961 IPR016192 APOBEC/CMP deaminase, zinc-binding AMED_8963 IPR036264 Bacterial exopeptidase dimerisation domain AMED_8963 IPR011650 Peptidase M20, dimerisation domain AMED_8963 IPR002933 Peptidase M20 AMED_8963 IPR017439 Amidohydrolase AMED_8964 IPR006311 Twin-arginine translocation pathway, signal sequence AMED_8964 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMED_8964 IPR008475 Bacterial phospholipase C, C-terminal domain AMED_8964 IPR017767 Bacterial phospholipase C, phosphocholine-specific AMED_8964 IPR007312 Phosphoesterase AMED_8966 IPR005624 Haem-degrading AMED_8966 IPR038084 GlcG-like domain superfamily AMED_8966 IPR010371 Uncharacterised protein family UPF0303 AMED_8968 IPR012676 TGS-like AMED_8968 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMED_8968 IPR002320 Threonine-tRNA ligase, class IIa AMED_8968 IPR012675 Beta-grasp domain superfamily AMED_8968 IPR004095 TGS AMED_8968 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMED_8968 IPR033728 Threonine-tRNA ligase catalytic core domain AMED_8968 IPR004154 Anticodon-binding AMED_8968 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMED_8968 IPR036621 Anticodon-binding domain superfamily AMED_8968 IPR006195 Aminoacyl-tRNA synthetase, class II AMED_8969 IPR009061 Putative DNA-binding domain superfamily AMED_8969 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain AMED_8969 IPR012925 TipAS antibiotic-recognition domain AMED_8969 IPR000551 MerR-type HTH domain AMED_8970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8970 IPR035906 MetI-like superfamily AMED_8971 IPR035906 MetI-like superfamily AMED_8971 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_8972 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8972 IPR003593 AAA+ ATPase domain AMED_8972 IPR017871 ABC transporter, conserved site AMED_8972 IPR008995 Molybdate/tungstate binding, C-terminal AMED_8972 IPR003439 ABC transporter-like AMED_8972 IPR013611 Transport-associated OB, type 2 AMED_8974 IPR000485 AsnC-type HTH domain AMED_8974 IPR000524 Transcription regulator HTH, GntR AMED_8974 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8974 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_8974 IPR011711 GntR, C-terminal AMED_8974 IPR036390 Winged helix DNA-binding domain superfamily AMED_8975 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AMED_8975 IPR002220 DapA-like AMED_8975 IPR020624 Schiff base-forming aldolase, conserved site AMED_8975 IPR013785 Aldolase-type TIM barrel AMED_8975 IPR020625 Schiff base-forming aldolase, active site AMED_8978 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMED_8978 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMED_8978 IPR002986 Diaminopimelate decarboxylase, LysA AMED_8978 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMED_8978 IPR029066 PLP-binding barrel AMED_8978 IPR000183 Ornithine/DAP/Arg decarboxylase AMED_8980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_8980 IPR014016 UvrD-like helicase, ATP-binding domain AMED_8980 IPR000212 DNA helicase, UvrD/REP type AMED_8980 IPR027785 UvrD-like helicase C-terminal domain AMED_8986 IPR004104 Oxidoreductase, C-terminal AMED_8986 IPR000683 Oxidoreductase, N-terminal AMED_8986 IPR036291 NAD(P)-binding domain superfamily AMED_8988 IPR013785 Aldolase-type TIM barrel AMED_8988 IPR018517 tRNA-dihydrouridine synthase, conserved site AMED_8988 IPR001269 tRNA-dihydrouridine synthase AMED_8988 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AMED_8988 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AMED_8988 IPR035587 DUS-like, FMN-binding domain AMED_8989 IPR013785 Aldolase-type TIM barrel AMED_8989 IPR002241 Glycoside hydrolase, family 27 AMED_8989 IPR013780 Glycosyl hydrolase, all-beta AMED_8989 IPR000111 Glycoside hydrolase family 27/36, conserved site AMED_8989 IPR017853 Glycoside hydrolase superfamily AMED_8989 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain AMED_8990 IPR031158 Glycosyl hydrolases family 10, active site AMED_8990 IPR035992 Ricin B-like lectins AMED_8990 IPR017853 Glycoside hydrolase superfamily AMED_8990 IPR000772 Ricin B, lectin domain AMED_8990 IPR001000 Glycoside hydrolase family 10 domain AMED_8992 IPR011663 UbiC transcription regulator-associated AMED_8992 IPR036390 Winged helix DNA-binding domain superfamily AMED_8992 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_8992 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMED_8992 IPR000524 Transcription regulator HTH, GntR AMED_8993 IPR005502 ADP-ribosylation/Crystallin J1 AMED_8993 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AMED_8994 IPR029056 Ribokinase-like AMED_8994 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_8994 IPR011877 Ribokinase AMED_8994 IPR011611 Carbohydrate kinase PfkB AMED_8994 IPR002139 Ribokinase/fructokinase AMED_8997 IPR000639 Epoxide hydrolase-like AMED_8997 IPR000073 Alpha/beta hydrolase fold-1 AMED_8997 IPR029058 Alpha/Beta hydrolase fold AMED_8998 IPR015797 NUDIX hydrolase-like domain superfamily AMED_8998 IPR000086 NUDIX hydrolase domain AMED_8998 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 AMED_8999 IPR011006 CheY-like superfamily AMED_8999 IPR001789 Signal transduction response regulator, receiver domain AMED_8999 IPR029787 Nucleotide cyclase AMED_8999 IPR000160 GGDEF domain AMED_9001 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU AMED_9001 IPR004474 Cell envelope-related transcriptional attenuator domain AMED_9002 IPR026022 PhoU domain AMED_9002 IPR038078 PhoU-like domain superfamily AMED_9002 IPR028366 Phosphate transport system protein PhoU AMED_9003 IPR005670 Phosphate transport system permease protein 1 AMED_9003 IPR015850 ABC transporter, phosphate import, PstB AMED_9003 IPR017871 ABC transporter, conserved site AMED_9003 IPR003439 ABC transporter-like AMED_9003 IPR003593 AAA+ ATPase domain AMED_9003 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9004 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_9004 IPR005672 Phosphate transport system permease protein PstA AMED_9004 IPR035906 MetI-like superfamily AMED_9005 IPR011864 Phosphate ABC transporter, permease protein PstC AMED_9005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_9005 IPR035906 MetI-like superfamily AMED_9006 IPR024370 PBP domain AMED_9006 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS AMED_9007 IPR017813 Mycothiol acetyltransferase AMED_9007 IPR000182 GNAT domain AMED_9007 IPR016181 Acyl-CoA N-acyltransferase AMED_9008 IPR001867 OmpR/PhoB-type DNA-binding domain AMED_9008 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9008 IPR039420 Transcriptional regulatory protein WalR-like AMED_9008 IPR016032 Signal transduction response regulator, C-terminal effector AMED_9012 IPR001307 Thiosulphate sulfurtransferase, conserved site AMED_9012 IPR001763 Rhodanese-like domain AMED_9012 IPR036873 Rhodanese-like domain superfamily AMED_9013 IPR010814 Protein of unknown function DUF1416 AMED_9013 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMED_9015 IPR012674 Calycin AMED_9015 IPR014878 Domain of unknown function DUF1794 AMED_9015 IPR022939 Uncharacterised protein family UPF0678 AMED_9016 IPR003833 Carboxyltransferase domain, subdomain C and D AMED_9016 IPR029000 Cyclophilin-like domain superfamily AMED_9016 IPR010016 KipI family AMED_9017 IPR003778 Carboxyltransferase domain, subdomain A and B AMED_9017 IPR029000 Cyclophilin-like domain superfamily AMED_9025 IPR022694 3-hydroxyacyl-CoA dehydrogenase AMED_9025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMED_9025 IPR036291 NAD(P)-binding domain superfamily AMED_9025 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMED_9025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMED_9025 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMED_9027 IPR017871 ABC transporter, conserved site AMED_9027 IPR003593 AAA+ ATPase domain AMED_9027 IPR003439 ABC transporter-like AMED_9027 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9030 IPR036291 NAD(P)-binding domain superfamily AMED_9030 IPR000683 Oxidoreductase, N-terminal AMED_9030 IPR004104 Oxidoreductase, C-terminal AMED_9033 IPR000352 Peptide chain release factor class I AMED_9034 IPR010918 PurM-like, C-terminal domain AMED_9034 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AMED_9034 IPR036921 PurM-like, N-terminal domain superfamily AMED_9034 IPR016188 PurM-like, N-terminal domain AMED_9034 IPR036676 PurM-like, C-terminal domain superfamily AMED_9035 IPR000836 Phosphoribosyltransferase domain AMED_9035 IPR035584 Amidophosphoribosyltransferase, N-terminal AMED_9035 IPR005854 Amidophosphoribosyltransferase AMED_9035 IPR029057 Phosphoribosyltransferase-like AMED_9035 IPR017932 Glutamine amidotransferase type 2 domain AMED_9035 IPR029055 Nucleophile aminohydrolases, N-terminal AMED_9042 IPR018077 Glycoside hydrolase, family 25 subgroup AMED_9042 IPR008270 Glycoside hydrolase, family 25, active site AMED_9042 IPR002053 Glycoside hydrolase, family 25 AMED_9042 IPR017853 Glycoside hydrolase superfamily AMED_9043 IPR008270 Glycoside hydrolase, family 25, active site AMED_9043 IPR002053 Glycoside hydrolase, family 25 AMED_9043 IPR017853 Glycoside hydrolase superfamily AMED_9043 IPR018077 Glycoside hydrolase, family 25 subgroup AMED_9047 IPR010918 PurM-like, C-terminal domain AMED_9047 IPR036676 PurM-like, C-terminal domain superfamily AMED_9047 IPR036921 PurM-like, N-terminal domain superfamily AMED_9047 IPR016188 PurM-like, N-terminal domain AMED_9047 IPR010074 Phosphoribosylformylglycinamidine subunit PurL AMED_9047 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AMED_9048 IPR011527 ABC transporter type 1, transmembrane domain AMED_9048 IPR003593 AAA+ ATPase domain AMED_9048 IPR003439 ABC transporter-like AMED_9048 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9048 IPR017871 ABC transporter, conserved site AMED_9048 IPR039421 Type I protein exporter AMED_9048 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_9049 IPR017871 ABC transporter, conserved site AMED_9049 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9049 IPR039421 Type I protein exporter AMED_9049 IPR011917 ABC transporter, lipid A export, MsbA AMED_9049 IPR003593 AAA+ ATPase domain AMED_9049 IPR011527 ABC transporter type 1, transmembrane domain AMED_9049 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_9049 IPR003439 ABC transporter-like AMED_9050 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ AMED_9050 IPR029062 Class I glutamine amidotransferase-like AMED_9050 IPR017926 Glutamine amidotransferase AMED_9051 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AMED_9051 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS AMED_9052 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AMED_9052 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AMED_9052 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_9052 IPR012132 Glucose-methanol-choline oxidoreductase AMED_9052 IPR027424 Glucose Oxidase, domain 2 AMED_9053 IPR016161 Aldehyde/histidinol dehydrogenase AMED_9053 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMED_9053 IPR016162 Aldehyde dehydrogenase, N-terminal AMED_9053 IPR015590 Aldehyde dehydrogenase domain AMED_9053 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AMED_9053 IPR016163 Aldehyde dehydrogenase, C-terminal AMED_9056 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AMED_9056 IPR000387 Tyrosine specific protein phosphatases domain AMED_9056 IPR016130 Protein-tyrosine phosphatase, active site AMED_9056 IPR029021 Protein-tyrosine phosphatase-like AMED_9060 IPR028923 SAICAR synthetase/ADE2, N-terminal AMED_9060 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AMED_9060 IPR018236 SAICAR synthetase, conserved site AMED_9062 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMED_9062 IPR003593 AAA+ ATPase domain AMED_9062 IPR003439 ABC transporter-like AMED_9062 IPR017871 ABC transporter, conserved site AMED_9062 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9063 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMED_9063 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_9063 IPR035906 MetI-like superfamily AMED_9064 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_9064 IPR018313 Solute-binding protein family 3, conserved site AMED_9065 IPR018313 Solute-binding protein family 3, conserved site AMED_9065 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_9066 IPR018313 Solute-binding protein family 3, conserved site AMED_9066 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_9067 IPR019468 Adenylosuccinate lyase C-terminal AMED_9067 IPR000362 Fumarate lyase family AMED_9067 IPR022761 Fumarate lyase, N-terminal AMED_9067 IPR008948 L-Aspartase-like AMED_9067 IPR004769 Adenylosuccinate lyase AMED_9067 IPR020557 Fumarate lyase, conserved site AMED_9067 IPR024083 Fumarase/histidase, N-terminal AMED_9068 IPR036849 Enolase-like, C-terminal domain superfamily AMED_9068 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMED_9068 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AMED_9068 IPR029065 Enolase C-terminal domain-like AMED_9068 IPR023592 D-galactonate dehydratase AMED_9068 IPR034593 Mandelate racemase-like AMED_9068 IPR029017 Enolase-like, N-terminal AMED_9068 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMED_9069 IPR036291 NAD(P)-binding domain superfamily AMED_9069 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_9069 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9071 IPR036390 Winged helix DNA-binding domain superfamily AMED_9071 IPR000524 Transcription regulator HTH, GntR AMED_9071 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9071 IPR011711 GntR, C-terminal AMED_9071 IPR008920 Transcription regulator FadR/GntR, C-terminal AMED_9075 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase AMED_9075 IPR015424 Pyridoxal phosphate-dependent transferase AMED_9075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_9075 IPR023603 Threonine aldolase AMED_9075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_9076 IPR037512 Phosphoglycolate phosphatase, prokaryotic AMED_9076 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMED_9076 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AMED_9076 IPR006439 HAD hydrolase, subfamily IA AMED_9076 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_9076 IPR036412 HAD-like superfamily AMED_9076 IPR023214 HAD superfamily AMED_9076 IPR041492 Haloacid dehalogenase-like hydrolase AMED_9079 IPR004839 Aminotransferase, class I/classII AMED_9079 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMED_9079 IPR015424 Pyridoxal phosphate-dependent transferase AMED_9079 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_9080 IPR008258 Transglycosylase SLT domain 1 AMED_9080 IPR023346 Lysozyme-like domain superfamily AMED_9086 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AMED_9086 IPR011054 Rudiment single hybrid motif AMED_9086 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AMED_9086 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AMED_9086 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AMED_9086 IPR000115 Phosphoribosylglycinamide synthetase AMED_9086 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMED_9086 IPR016185 Pre-ATP-grasp domain superfamily AMED_9086 IPR013815 ATP-grasp fold, subdomain 1 AMED_9086 IPR011761 ATP-grasp fold AMED_9087 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily AMED_9087 IPR030395 Glycerophosphodiester phosphodiesterase domain AMED_9092 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_9092 IPR011877 Ribokinase AMED_9092 IPR011611 Carbohydrate kinase PfkB AMED_9092 IPR029056 Ribokinase-like AMED_9092 IPR002139 Ribokinase/fructokinase AMED_9093 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AMED_9093 IPR032677 GTP cyclohydrolase II AMED_9093 IPR036144 RibA-like superfamily AMED_9093 IPR000926 GTP cyclohydrolase II, RibA AMED_9093 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMED_9093 IPR016299 Riboflavin biosynthesis protein RibBA AMED_9094 IPR036259 MFS transporter superfamily AMED_9094 IPR020846 Major facilitator superfamily domain AMED_9094 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family AMED_9094 IPR011701 Major facilitator superfamily AMED_9094 IPR005829 Sugar transporter, conserved site AMED_9095 IPR006153 Cation/H+ exchanger AMED_9095 IPR038770 Sodium/solute symporter superfamily AMED_9095 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria AMED_9095 IPR018422 Cation/H+ exchanger, CPA1 family AMED_9096 IPR011251 Luciferase-like domain AMED_9096 IPR036661 Luciferase-like domain superfamily AMED_9096 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c AMED_9098 IPR033128 Adenylosuccinate synthase, active site AMED_9098 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9098 IPR001114 Adenylosuccinate synthetase AMED_9098 IPR042111 Adenylosuccinate synthetase, domain 3 AMED_9098 IPR018220 Adenylosuccinate synthase, GTP-binding site AMED_9098 IPR042109 Adenylosuccinate synthetase, domain 1 AMED_9098 IPR042110 Adenylosuccinate synthetase, domain 2 AMED_9101 IPR010610 Domain of unknown function DUF1205 AMED_9105 IPR029787 Nucleotide cyclase AMED_9105 IPR001789 Signal transduction response regulator, receiver domain AMED_9105 IPR011006 CheY-like superfamily AMED_9105 IPR000160 GGDEF domain AMED_9106 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_9106 IPR001647 DNA-binding HTH domain, TetR-type AMED_9106 IPR009057 Homeobox-like domain superfamily AMED_9106 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_9110 IPR013785 Aldolase-type TIM barrel AMED_9110 IPR000771 Fructose-bisphosphate aldolase, class-II AMED_9110 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype AMED_9112 IPR020471 Aldo/keto reductase AMED_9112 IPR023210 NADP-dependent oxidoreductase domain AMED_9112 IPR036812 NADP-dependent oxidoreductase domain superfamily AMED_9113 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9113 IPR036291 NAD(P)-binding domain superfamily AMED_9114 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_9114 IPR020946 Flavin monooxygenase-like AMED_9116 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_9116 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_9116 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_9116 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_9116 IPR000951 Phthalate dioxygenase reductase AMED_9116 IPR017938 Riboflavin synthase-like beta-barrel AMED_9116 IPR012675 Beta-grasp domain superfamily AMED_9116 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_9120 IPR003764 N-acetylglucosamine-6-phosphate deacetylase AMED_9120 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_9120 IPR032466 Metal-dependent hydrolase AMED_9120 IPR006680 Amidohydrolase-related AMED_9122 IPR032816 SNARE associated Golgi protein AMED_9122 IPR032818 DedA family AMED_9123 IPR002716 PIN domain AMED_9123 IPR022907 VapC family AMED_9123 IPR029060 PIN-like domain superfamily AMED_9124 IPR036165 YefM-like superfamily AMED_9125 IPR016164 FAD-linked oxidase-like, C-terminal AMED_9125 IPR006094 FAD linked oxidase, N-terminal AMED_9125 IPR004490 Glycolate oxidase subunit GlcD AMED_9125 IPR004113 FAD-linked oxidase, C-terminal AMED_9125 IPR036318 FAD-binding, type PCMH-like superfamily AMED_9125 IPR016166 FAD-binding domain, PCMH-type AMED_9125 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMED_9126 IPR019920 F420-binding domain, putative AMED_9126 IPR012349 FMN-binding split barrel AMED_9126 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMED_9128 IPR011701 Major facilitator superfamily AMED_9128 IPR020846 Major facilitator superfamily domain AMED_9128 IPR036259 MFS transporter superfamily AMED_9128 IPR005829 Sugar transporter, conserved site AMED_9128 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_9128 IPR036390 Winged helix DNA-binding domain superfamily AMED_9128 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9130 IPR032816 SNARE associated Golgi protein AMED_9130 IPR032818 DedA family AMED_9132 IPR026992 Non-haem dioxygenase N-terminal domain AMED_9132 IPR027443 Isopenicillin N synthase-like AMED_9132 IPR005123 Oxoglutarate/iron-dependent dioxygenase AMED_9133 IPR036291 NAD(P)-binding domain superfamily AMED_9133 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9133 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_9134 IPR000764 Uridine kinase-like AMED_9134 IPR026008 Uridine kinase AMED_9134 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9134 IPR006083 Phosphoribulokinase/uridine kinase AMED_9135 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_9135 IPR011611 Carbohydrate kinase PfkB AMED_9135 IPR002139 Ribokinase/fructokinase AMED_9135 IPR029056 Ribokinase-like AMED_9135 IPR030877 Sulfofructose kinase AMED_9136 IPR003439 ABC transporter-like AMED_9136 IPR003593 AAA+ ATPase domain AMED_9136 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9137 IPR001851 ABC transporter, permease AMED_9138 IPR028082 Periplasmic binding protein-like I AMED_9138 IPR025997 Periplasmic binding protein AMED_9139 IPR023588 Transcription regulator HTH, PurR AMED_9139 IPR028082 Periplasmic binding protein-like I AMED_9139 IPR000843 LacI-type HTH domain AMED_9139 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_9140 IPR028082 Periplasmic binding protein-like I AMED_9140 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMED_9140 IPR006377 Catabolite control protein A AMED_9140 IPR000843 LacI-type HTH domain AMED_9142 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AMED_9142 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMED_9142 IPR009010 Aspartate decarboxylase-like domain superfamily AMED_9142 IPR006656 Molybdopterin oxidoreductase AMED_9142 IPR006657 Molybdopterin dinucleotide-binding domain AMED_9142 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMED_9148 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_9148 IPR014284 RNA polymerase sigma-70 like domain AMED_9148 IPR039425 RNA polymerase sigma-70 like AMED_9148 IPR013325 RNA polymerase sigma factor, region 2 AMED_9148 IPR007627 RNA polymerase sigma-70 region 2 AMED_9148 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9148 IPR037401 SnoaL-like domain AMED_9148 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_9148 IPR014305 RNA polymerase sigma-G type, actinobacteria AMED_9148 IPR032710 NTF2-like domain superfamily AMED_9148 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_9149 IPR023031 Orotate phosphoribosyltransferase AMED_9149 IPR004467 Orotate phosphoribosyl transferase domain AMED_9149 IPR000836 Phosphoribosyltransferase domain AMED_9149 IPR029057 Phosphoribosyltransferase-like AMED_9151 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9151 IPR017871 ABC transporter, conserved site AMED_9151 IPR003439 ABC transporter-like AMED_9151 IPR003593 AAA+ ATPase domain AMED_9152 IPR036291 NAD(P)-binding domain superfamily AMED_9152 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9155 IPR001270 ClpA/B family AMED_9155 IPR041546 ClpA/ClpB, AAA lid domain AMED_9155 IPR003593 AAA+ ATPase domain AMED_9155 IPR028299 ClpA/B, conserved site 2 AMED_9155 IPR018368 ClpA/B, conserved site 1 AMED_9155 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9155 IPR003959 ATPase, AAA-type, core AMED_9155 IPR017730 Chaperonin ClpB AMED_9155 IPR019489 Clp ATPase, C-terminal AMED_9155 IPR036628 Clp, N-terminal domain superfamily AMED_9155 IPR004176 Clp, N-terminal AMED_9158 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_9158 IPR012675 Beta-grasp domain superfamily AMED_9158 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_9158 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_9158 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_9158 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_9158 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_9158 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_9158 IPR017938 Riboflavin synthase-like beta-barrel AMED_9158 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_9159 IPR017927 FAD-binding domain, ferredoxin reductase-type AMED_9159 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMED_9159 IPR012675 Beta-grasp domain superfamily AMED_9159 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMED_9159 IPR036010 2Fe-2S ferredoxin-like superfamily AMED_9159 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMED_9159 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMED_9159 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMED_9159 IPR017938 Riboflavin synthase-like beta-barrel AMED_9159 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMED_9160 IPR029058 Alpha/Beta hydrolase fold AMED_9160 IPR002925 Dienelactone hydrolase AMED_9161 IPR004302 Cellulose/chitin-binding protein, N-terminal AMED_9161 IPR014756 Immunoglobulin E-set AMED_9163 IPR000551 MerR-type HTH domain AMED_9163 IPR009061 Putative DNA-binding domain superfamily AMED_9164 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMED_9164 IPR002939 Chaperone DnaJ, C-terminal AMED_9164 IPR012724 Chaperone DnaJ AMED_9164 IPR018253 DnaJ domain, conserved site AMED_9164 IPR001623 DnaJ domain AMED_9164 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AMED_9164 IPR036869 Chaperone J-domain superfamily AMED_9164 IPR008971 HSP40/DnaJ peptide-binding AMED_9165 IPR000740 GrpE nucleotide exchange factor AMED_9165 IPR009012 GrpE nucleotide exchange factor, head AMED_9165 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMED_9166 IPR013126 Heat shock protein 70 family AMED_9166 IPR012725 Chaperone DnaK AMED_9166 IPR018181 Heat shock protein 70, conserved site AMED_9166 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMED_9166 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMED_9168 IPR036610 PEBP-like superfamily AMED_9168 IPR005247 YbhB/YbcL AMED_9168 IPR008914 Phosphatidylethanolamine-binding protein AMED_9173 IPR004017 Cysteine-rich domain AMED_9173 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMED_9173 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMED_9173 IPR023234 NarG-like domain AMED_9173 IPR009051 Alpha-helical ferredoxin AMED_9173 IPR036197 NarG-like superfamily AMED_9176 IPR035940 CAP superfamily AMED_9176 IPR014258 CAP domain, YkwD-like AMED_9176 IPR014044 CAP domain AMED_9179 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_9179 IPR002938 FAD-binding domain AMED_9180 IPR033704 dUTPase, trimeric AMED_9180 IPR036157 dUTPase-like superfamily AMED_9180 IPR029054 dUTPase-like AMED_9180 IPR011962 dCTP deaminase AMED_9183 IPR014284 RNA polymerase sigma-70 like domain AMED_9183 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_9183 IPR007627 RNA polymerase sigma-70 region 2 AMED_9183 IPR013325 RNA polymerase sigma factor, region 2 AMED_9183 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9183 IPR011990 Tetratricopeptide-like helical domain superfamily AMED_9183 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_9184 IPR005545 YCII-related AMED_9184 IPR011008 Dimeric alpha-beta barrel AMED_9185 IPR017972 Cytochrome P450, conserved site AMED_9185 IPR036396 Cytochrome P450 superfamily AMED_9185 IPR002397 Cytochrome P450, B-class AMED_9185 IPR001128 Cytochrome P450 AMED_9190 IPR029052 Metallo-dependent phosphatase-like AMED_9190 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMED_9190 IPR006179 5'-Nucleotidase/apyrase AMED_9191 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMED_9191 IPR011053 Single hybrid motif AMED_9191 IPR000089 Biotin/lipoyl attachment AMED_9191 IPR029058 Alpha/Beta hydrolase fold AMED_9191 IPR000073 Alpha/beta hydrolase fold-1 AMED_9192 IPR036291 NAD(P)-binding domain superfamily AMED_9192 IPR004104 Oxidoreductase, C-terminal AMED_9192 IPR000683 Oxidoreductase, N-terminal AMED_9194 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMED_9194 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial AMED_9194 IPR015637 G/U mismatch-specific DNA glycosylase AMED_9194 IPR005122 Uracil-DNA glycosylase-like AMED_9195 IPR011006 CheY-like superfamily AMED_9195 IPR016032 Signal transduction response regulator, C-terminal effector AMED_9195 IPR000792 Transcription regulator LuxR, C-terminal AMED_9195 IPR001789 Signal transduction response regulator, receiver domain AMED_9196 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMED_9196 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMED_9196 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMED_9196 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMED_9196 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMED_9196 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMED_9196 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMED_9198 IPR036259 MFS transporter superfamily AMED_9198 IPR020846 Major facilitator superfamily domain AMED_9198 IPR011701 Major facilitator superfamily AMED_9202 IPR018369 Chaperonin GroES, conserved site AMED_9202 IPR037124 GroES chaperonin superfamily AMED_9202 IPR020818 GroES chaperonin family AMED_9202 IPR011032 GroES-like superfamily AMED_9207 IPR003593 AAA+ ATPase domain AMED_9207 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9207 IPR017871 ABC transporter, conserved site AMED_9207 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMED_9207 IPR003439 ABC transporter-like AMED_9208 IPR035906 MetI-like superfamily AMED_9208 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMED_9208 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMED_9209 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMED_9209 IPR018313 Solute-binding protein family 3, conserved site AMED_9209 IPR001320 Ionotropic glutamate receptor AMED_9209 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter AMED_9210 IPR016450 Uncharacterised conserved protein UCP005522 AMED_9210 IPR007302 Circularly permuted ATPgrasp domain AMED_9212 IPR002931 Transglutaminase-like AMED_9212 IPR013589 Bacterial transglutaminase-like, N-terminal AMED_9212 IPR038765 Papain-like cysteine peptidase superfamily AMED_9214 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_9214 IPR001647 DNA-binding HTH domain, TetR-type AMED_9214 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMED_9214 IPR009057 Homeobox-like domain superfamily AMED_9215 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AMED_9215 IPR036264 Bacterial exopeptidase dimerisation domain AMED_9215 IPR002933 Peptidase M20 AMED_9215 IPR011650 Peptidase M20, dimerisation domain AMED_9216 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha AMED_9216 IPR001017 Dehydrogenase, E1 component AMED_9216 IPR029061 Thiamin diphosphate-binding fold AMED_9217 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMED_9217 IPR033248 Transketolase, C-terminal domain AMED_9217 IPR005475 Transketolase-like, pyrimidine-binding domain AMED_9217 IPR029061 Thiamin diphosphate-binding fold AMED_9218 IPR036625 E3-binding domain superfamily AMED_9218 IPR011053 Single hybrid motif AMED_9218 IPR004167 Peripheral subunit-binding domain AMED_9218 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMED_9218 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMED_9218 IPR000089 Biotin/lipoyl attachment AMED_9220 IPR017871 ABC transporter, conserved site AMED_9220 IPR039421 Type I protein exporter AMED_9220 IPR003439 ABC transporter-like AMED_9220 IPR011527 ABC transporter type 1, transmembrane domain AMED_9220 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMED_9220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9220 IPR003593 AAA+ ATPase domain AMED_9223 IPR007313 FxsA cytoplasmic membrane protein AMED_9224 IPR011335 Restriction endonuclease type II-like AMED_9224 IPR004603 DNA mismatch endonuclease vsr AMED_9225 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site AMED_9225 IPR018117 DNA methylase, C-5 cytosine-specific, active site AMED_9225 IPR001525 C-5 cytosine methyltransferase AMED_9225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_9231 IPR009057 Homeobox-like domain superfamily AMED_9231 IPR001647 DNA-binding HTH domain, TetR-type AMED_9231 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_9231 IPR019915 Transcription regulator, pyrimidine utilisation, RutR AMED_9231 IPR013573 Transcription regulator YcdC, C-terminal AMED_9232 IPR002539 MaoC-like dehydratase domain AMED_9232 IPR029069 HotDog domain superfamily AMED_9232 IPR003965 Fatty acid synthase AMED_9233 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_9233 IPR036291 NAD(P)-binding domain superfamily AMED_9233 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_9233 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9234 IPR012806 Acetyl-CoA C-acyltransferase FadI AMED_9234 IPR020610 Thiolase, active site AMED_9234 IPR016039 Thiolase-like AMED_9234 IPR002155 Thiolase AMED_9234 IPR020617 Thiolase, C-terminal AMED_9234 IPR020613 Thiolase, conserved site AMED_9234 IPR020616 Thiolase, N-terminal AMED_9243 IPR001734 Sodium/solute symporter AMED_9243 IPR038377 Sodium/glucose symporter superfamily AMED_9245 IPR029058 Alpha/Beta hydrolase fold AMED_9245 IPR000073 Alpha/beta hydrolase fold-1 AMED_9250 IPR003439 ABC transporter-like AMED_9250 IPR003593 AAA+ ATPase domain AMED_9250 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9252 IPR036661 Luciferase-like domain superfamily AMED_9252 IPR011251 Luciferase-like domain AMED_9252 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG AMED_9253 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising AMED_9253 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain AMED_9253 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal AMED_9253 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site AMED_9253 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal AMED_9253 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal AMED_9256 IPR009012 GrpE nucleotide exchange factor, head AMED_9256 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMED_9256 IPR000740 GrpE nucleotide exchange factor AMED_9258 IPR022812 Dynamin superfamily AMED_9258 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9259 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_9259 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_9260 IPR000792 Transcription regulator LuxR, C-terminal AMED_9260 IPR001789 Signal transduction response regulator, receiver domain AMED_9260 IPR011006 CheY-like superfamily AMED_9260 IPR016032 Signal transduction response regulator, C-terminal effector AMED_9261 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_9261 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9261 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMED_9261 IPR036291 NAD(P)-binding domain superfamily AMED_9263 IPR003439 ABC transporter-like AMED_9263 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9263 IPR003593 AAA+ ATPase domain AMED_9263 IPR017871 ABC transporter, conserved site AMED_9265 IPR003439 ABC transporter-like AMED_9265 IPR003593 AAA+ ATPase domain AMED_9265 IPR017871 ABC transporter, conserved site AMED_9265 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9268 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type AMED_9268 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_9270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9270 IPR003439 ABC transporter-like AMED_9270 IPR003593 AAA+ ATPase domain AMED_9270 IPR015854 ABC transporter, lipoprotein release, LolD AMED_9270 IPR017871 ABC transporter, conserved site AMED_9270 IPR011924 Lipoprotein releasing system, ATP-binding protein AMED_9271 IPR008595 Sensor DegS AMED_9271 IPR003594 Histidine kinase/HSP90-like ATPase AMED_9271 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMED_9271 IPR005467 Histidine kinase domain AMED_9271 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMED_9271 IPR016381 Signal transduction histidine kinase, DegS AMED_9272 IPR001789 Signal transduction response regulator, receiver domain AMED_9272 IPR000792 Transcription regulator LuxR, C-terminal AMED_9272 IPR011006 CheY-like superfamily AMED_9272 IPR016032 Signal transduction response regulator, C-terminal effector AMED_9275 IPR023512 Deaminase MtaD/DadD AMED_9275 IPR006680 Amidohydrolase-related AMED_9275 IPR032466 Metal-dependent hydrolase AMED_9275 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMED_9276 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_9276 IPR036291 NAD(P)-binding domain superfamily AMED_9276 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9277 IPR008966 Adhesion domain superfamily AMED_9277 IPR011252 Fibrogen-binding domain 1 AMED_9277 IPR013783 Immunoglobulin-like fold AMED_9277 IPR019948 Gram-positive LPXTG cell wall anchor AMED_9277 IPR033764 SD-repeat containing protein, B domain AMED_9277 IPR019931 LPXTG cell wall anchor domain AMED_9277 IPR041171 SDR-like Ig domain AMED_9277 IPR005877 YSIRK Gram-positive signal peptide AMED_9279 IPR011701 Major facilitator superfamily AMED_9279 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG AMED_9279 IPR036259 MFS transporter superfamily AMED_9279 IPR020846 Major facilitator superfamily domain AMED_9280 IPR036390 Winged helix DNA-binding domain superfamily AMED_9280 IPR000835 MarR-type HTH domain AMED_9280 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9281 IPR023214 HAD superfamily AMED_9281 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMED_9281 IPR006439 HAD hydrolase, subfamily IA AMED_9281 IPR036412 HAD-like superfamily AMED_9281 IPR041492 Haloacid dehalogenase-like hydrolase AMED_9283 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9283 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_9283 IPR013325 RNA polymerase sigma factor, region 2 AMED_9283 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_9283 IPR007627 RNA polymerase sigma-70 region 2 AMED_9283 IPR014284 RNA polymerase sigma-70 like domain AMED_9283 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMED_9283 IPR014325 RNA polymerase sigma-E factor, actinobacteria AMED_9284 IPR036291 NAD(P)-binding domain superfamily AMED_9284 IPR002587 Myo-inositol-1-phosphate synthase AMED_9284 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like AMED_9284 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria AMED_9285 IPR011991 ArsR-like helix-turn-helix domain AMED_9285 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9285 IPR005149 Transcription regulator PadR, N-terminal AMED_9285 IPR036390 Winged helix DNA-binding domain superfamily AMED_9286 IPR035169 Protein of unknown function DUF5318 AMED_9287 IPR012338 Beta-lactamase/transpeptidase-like AMED_9287 IPR001460 Penicillin-binding protein, transpeptidase AMED_9287 IPR001264 Glycosyl transferase, family 51 AMED_9287 IPR036950 Penicillin binding protein transglycosylase domain AMED_9287 IPR023346 Lysozyme-like domain superfamily AMED_9288 IPR001264 Glycosyl transferase, family 51 AMED_9288 IPR023346 Lysozyme-like domain superfamily AMED_9288 IPR036950 Penicillin binding protein transglycosylase domain AMED_9288 IPR012338 Beta-lactamase/transpeptidase-like AMED_9288 IPR001460 Penicillin-binding protein, transpeptidase AMED_9289 IPR004104 Oxidoreductase, C-terminal AMED_9289 IPR036291 NAD(P)-binding domain superfamily AMED_9289 IPR000683 Oxidoreductase, N-terminal AMED_9290 IPR022687 DTXR-type HTH domain AMED_9290 IPR036390 Winged helix DNA-binding domain superfamily AMED_9290 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9290 IPR000600 ROK family AMED_9292 IPR001719 AP endonuclease 2 AMED_9292 IPR018246 AP endonuclease 2, zinc binding site AMED_9292 IPR036237 Xylose isomerase-like superfamily AMED_9292 IPR013022 Xylose isomerase-like, TIM barrel domain AMED_9296 IPR035980 Ribosomal protein S6 superfamily AMED_9296 IPR020814 Ribosomal protein S6, plastid/chloroplast AMED_9296 IPR000529 Ribosomal protein S6 AMED_9296 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMED_9297 IPR011344 Single-stranded DNA-binding protein AMED_9297 IPR000424 Primosome PriB/single-strand DNA-binding AMED_9297 IPR012340 Nucleic acid-binding, OB-fold AMED_9298 IPR001648 Ribosomal protein S18 AMED_9298 IPR018275 Ribosomal protein S18, conserved site AMED_9298 IPR036870 Ribosomal protein S18 superfamily AMED_9299 IPR020594 Ribosomal protein L9, bacteria/chloroplast AMED_9299 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMED_9299 IPR000244 Ribosomal protein L9 AMED_9299 IPR020069 Ribosomal protein L9, C-terminal AMED_9299 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMED_9299 IPR020070 Ribosomal protein L9, N-terminal AMED_9299 IPR036935 Ribosomal protein L9, N-terminal domain superfamily AMED_9304 IPR004860 Homing endonuclease, LAGLIDADG AMED_9304 IPR006141 Intein N-terminal splicing region AMED_9304 IPR006141 Intein N-terminal splicing region AMED_9304 IPR004042 Intein DOD homing endonuclease AMED_9304 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMED_9304 IPR030934 Intein C-terminal splicing region AMED_9304 IPR006142 Intein AMED_9304 IPR003593 AAA+ ATPase domain AMED_9304 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9304 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AMED_9304 IPR007692 DNA helicase, DnaB type AMED_9304 IPR007693 DNA helicase, DnaB-like, N-terminal AMED_9304 IPR007694 DNA helicase, DnaB-like, C-terminal AMED_9304 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9304 IPR027434 Homing endonuclease AMED_9304 IPR036844 Hint domain superfamily AMED_9304 IPR004860 Homing endonuclease, LAGLIDADG AMED_9304 IPR003587 Hint domain N-terminal AMED_9304 IPR007694 DNA helicase, DnaB-like, C-terminal AMED_9304 IPR003587 Hint domain N-terminal AMED_9304 IPR003593 AAA+ ATPase domain AMED_9304 IPR003586 Hint domain C-terminal AMED_9304 IPR006142 Intein AMED_9304 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AMED_9304 IPR007692 DNA helicase, DnaB type AMED_9304 IPR004042 Intein DOD homing endonuclease AMED_9304 IPR027434 Homing endonuclease AMED_9304 IPR036844 Hint domain superfamily AMED_9304 IPR007693 DNA helicase, DnaB-like, N-terminal AMED_9304 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMED_9304 IPR003586 Hint domain C-terminal AMED_9304 IPR030934 Intein C-terminal splicing region AMED_9307 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type AMED_9307 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMED_9310 IPR002549 Transmembrane protein TqsA-like AMED_9312 IPR011006 CheY-like superfamily AMED_9312 IPR016032 Signal transduction response regulator, C-terminal effector AMED_9312 IPR001789 Signal transduction response regulator, receiver domain AMED_9312 IPR000792 Transcription regulator LuxR, C-terminal AMED_9315 IPR020846 Major facilitator superfamily domain AMED_9315 IPR011701 Major facilitator superfamily AMED_9315 IPR036259 MFS transporter superfamily AMED_9316 IPR008279 PEP-utilising enzyme, mobile domain AMED_9316 IPR000121 PEP-utilising enzyme, C-terminal AMED_9316 IPR023151 PEP-utilising enzyme, conserved site AMED_9316 IPR040442 Pyruvate kinase-like domain superfamily AMED_9316 IPR024692 Phosphotransferase system, enzyme I AMED_9316 IPR006318 Phosphotransferase system, enzyme I-like AMED_9316 IPR008731 Phosphotransferase system, enzyme I N-terminal AMED_9316 IPR036618 PtsI, HPr-binding domain superfamily AMED_9316 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMED_9316 IPR036637 Phosphohistidine domain superfamily AMED_9316 IPR018274 PEP-utilising enzyme, active site AMED_9318 IPR002139 Ribokinase/fructokinase AMED_9318 IPR011611 Carbohydrate kinase PfkB AMED_9318 IPR029056 Ribokinase-like AMED_9318 IPR011877 Ribokinase AMED_9318 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMED_9328 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMED_9328 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) AMED_9328 IPR001647 DNA-binding HTH domain, TetR-type AMED_9328 IPR009057 Homeobox-like domain superfamily AMED_9329 IPR002347 Short-chain dehydrogenase/reductase SDR AMED_9329 IPR036291 NAD(P)-binding domain superfamily AMED_9329 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMED_9330 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMED_9330 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMED_9330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMED_9330 IPR015413 Methionyl/Leucyl tRNA synthetase AMED_9330 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMED_9330 IPR025709 Leucyl-tRNA synthetase, editing domain AMED_9330 IPR002302 Leucine-tRNA ligase AMED_9333 IPR003774 Protein of unknown function UPF0301 AMED_9334 IPR036259 MFS transporter superfamily AMED_9334 IPR011701 Major facilitator superfamily AMED_9341 IPR005502 ADP-ribosylation/Crystallin J1 AMED_9341 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AMED_9341 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase AMED_9346 IPR032810 CCA-adding enzyme, C-terminal AMED_9346 IPR023068 CCA-adding enzyme, firmicutes AMED_9346 IPR002646 Poly A polymerase, head domain AMED_9346 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMED_9347 IPR020476 NUDIX hydrolase AMED_9347 IPR015797 NUDIX hydrolase-like domain superfamily AMED_9347 IPR000086 NUDIX hydrolase domain AMED_9347 IPR020084 NUDIX hydrolase, conserved site AMED_9349 IPR004268 Peptidoglycan biosynthesis protein MurJ AMED_9349 IPR011009 Protein kinase-like domain superfamily AMED_9351 IPR014284 RNA polymerase sigma-70 like domain AMED_9351 IPR013325 RNA polymerase sigma factor, region 2 AMED_9351 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMED_9351 IPR036388 Winged helix-like DNA-binding domain superfamily AMED_9351 IPR013324 RNA polymerase sigma factor, region 3/4-like AMED_9351 IPR039425 RNA polymerase sigma-70 like AMED_9351 IPR007627 RNA polymerase sigma-70 region 2 AMED_9353 IPR005982 Thioredoxin reductase AMED_9353 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMED_9353 IPR023753 FAD/NAD(P)-binding domain AMED_9353 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_9354 IPR036188 FAD/NAD(P)-binding domain superfamily AMED_9354 IPR013766 Thioredoxin domain AMED_9354 IPR017937 Thioredoxin, conserved site AMED_9354 IPR005746 Thioredoxin AMED_9354 IPR036249 Thioredoxin-like superfamily AMED_9354 IPR023753 FAD/NAD(P)-binding domain AMED_9354 IPR005982 Thioredoxin reductase AMED_9354 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMED_9355 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain AMED_9355 IPR002477 Peptidoglycan binding-like AMED_9355 IPR036365 PGBD-like superfamily AMED_9355 IPR036366 PGBD superfamily AMED_9357 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMED_9357 IPR015424 Pyridoxal phosphate-dependent transferase AMED_9357 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMED_9357 IPR004839 Aminotransferase, class I/classII AMED_9358 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AMED_9358 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AMED_9358 IPR011095 D-alanine--D-alanine ligase, C-terminal AMED_9358 IPR005905 D-alanine--D-alanine ligase AMED_9358 IPR013815 ATP-grasp fold, subdomain 1 AMED_9358 IPR011761 ATP-grasp fold AMED_9358 IPR016185 Pre-ATP-grasp domain superfamily AMED_9359 IPR041468 ParB/Spo0J, HTH domain AMED_9359 IPR003115 ParB/Sulfiredoxin AMED_9359 IPR036086 ParB/Sulfiredoxin superfamily AMED_9359 IPR004437 ParB/RepB/Spo0J partition protein AMED_9360 IPR025669 AAA domain AMED_9360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMED_9361 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMED_9361 IPR003682 rRNA small subunit methyltransferase G AMED_9364 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMED_9364 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AMED_9365 IPR002696 Putative membrane protein insertion efficiency factor AMED_9366 IPR000271 Ribosomal protein L34 AMED_9366 IPR020939 Ribosomal protein L34, conserved site