CU254_RS00020	SM00028	Tetratricopeptide repeats
CU254_RS00070	SM00421	helix_turn_helix, Lux Regulon
CU254_RS00070	SM00448	cheY-homologous receiver domain
CU254_RS00085	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS00120	SM00998	Adenylosuccinate lyase C-terminus
CU254_RS00150	SM00960	Roadblock/LC7 domain
CU254_RS00155	SM00387	Histidine kinase-like ATPases
CU254_RS00160	SM01260	CU254_RS00160
CU254_RS00175	SM00020	Trypsin-like serine protease
CU254_RS00220	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS00270	SM00829	Enoylreductase
CU254_RS00280	SM00547	Zinc finger domain
CU254_RS00290	SM00327	von Willebrand factor (vWF) type A domain
CU254_RS00295	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS00320	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS00350	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS00355	SM00422	helix_turn_helix, mercury resistance
CU254_RS00455	SM00120	Hemopexin-like repeats.
CU254_RS00500	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS00560	SM00357	Cold shock protein domain
CU254_RS00580	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS00585	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS00620	SM00357	Cold shock protein domain
CU254_RS00665	SM00052	Putative diguanylate phosphodiesterase
CU254_RS00665	SM00091	PAS domain
CU254_RS00665	SM00267	diguanylate cyclase
CU254_RS00700	SM00422	helix_turn_helix, mercury resistance
CU254_RS00725	SM01350	CU254_RS00725
CU254_RS00730	SM00849	Metallo-beta-lactamase superfamily
CU254_RS00735	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS00845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS00890	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS00935	SM00829	Enoylreductase
CU254_RS00965	SM00829	Enoylreductase
CU254_RS01025	SM00855	Phosphoglycerate mutase family
CU254_RS01045	SM00387	Histidine kinase-like ATPases
CU254_RS01045	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS01050	SM00448	cheY-homologous receiver domain
CU254_RS01050	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS01085	SM01155	CU254_RS01085
CU254_RS01095	SM00563	Phosphate acyltransferases
CU254_RS01160	SM01004	Delta-aminolevulinic acid dehydratase
CU254_RS01185	SM00382	ATPases associated with a variety of cellular activities
CU254_RS01210	SM00855	Phosphoglycerate mutase family
CU254_RS01250	SM00344	helix_turn_helix ASNC type
CU254_RS01320	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS01365	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CU254_RS01370	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CU254_RS01370	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CU254_RS01450	SM00344	helix_turn_helix ASNC type
CU254_RS01495	SM00984	UDP binding domain
CU254_RS01520	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CU254_RS01535	SM00014	Acid phosphatase homologues
CU254_RS01615	SM00422	helix_turn_helix, mercury resistance
CU254_RS01655	SM00382	ATPases associated with a variety of cellular activities
CU254_RS01655	SM00464	Found in ATP-dependent protease La (LON)
CU254_RS01675	SM00052	Putative diguanylate phosphodiesterase
CU254_RS01675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS01675	SM00267	diguanylate cyclase
CU254_RS01725	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CU254_RS01725	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CU254_RS01730	SM00649	Ribosomal protein L11/L12
CU254_RS01760	SM00382	ATPases associated with a variety of cellular activities
CU254_RS01815	SM00830	Chorismate mutase type II
CU254_RS01825	SM00663	RNA polymerase I subunit A N-terminus
CU254_RS01935	SM00838	Elongation factor G C-terminus
CU254_RS01935	SM00889	Elongation factor G, domain IV
CU254_RS01945	SM01403	CU254_RS01945
CU254_RS01965	SM01382	CU254_RS01965
CU254_RS01965	SM01383	CU254_RS01965
CU254_RS01980	SM00322	K homology RNA-binding domain
CU254_RS02000	SM01374	CU254_RS02000
CU254_RS02005	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CU254_RS02095	SM00363	S4 RNA-binding domain
CU254_RS02095	SM01390	CU254_RS02095
CU254_RS02100	SM00662	RNA polymerases D
CU254_RS02245	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS02245	SM01134	CU254_RS02245
CU254_RS02255	SM00382	ATPases associated with a variety of cellular activities
CU254_RS02260	SM01005	Alanine racemase, C-terminal domain
CU254_RS02365	SM00644	CU254_RS02365
CU254_RS02370	SM00883	Chaperonin 10 Kd subunit
CU254_RS02380	SM00822	CU254_RS02380
CU254_RS02395	SM00422	helix_turn_helix, mercury resistance
CU254_RS02405	SM00421	helix_turn_helix, Lux Regulon
CU254_RS02405	SM00448	cheY-homologous receiver domain
CU254_RS02430	SM00116	Domain in cystathionine beta-synthase and other proteins.
CU254_RS02430	SM01240	CU254_RS02430
CU254_RS02440	SM01240	CU254_RS02440
CU254_RS02515	SM00421	helix_turn_helix, Lux Regulon
CU254_RS02515	SM00448	cheY-homologous receiver domain
CU254_RS02535	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS02555	SM00830	Chorismate mutase type II
CU254_RS02595	SM00881	CoA binding domain
CU254_RS02615	SM00798	AICARFT/IMPCHase bienzyme
CU254_RS02615	SM00851	MGS-like domain
CU254_RS02645	SM00481	DNA polymerase alpha chain like domain
CU254_RS02680	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS02700	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS02730	SM01329	CU254_RS02730
CU254_RS02740	SM00849	Metallo-beta-lactamase superfamily
CU254_RS02825	SM00382	ATPases associated with a variety of cellular activities
CU254_RS02845	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CU254_RS02880	SM00487	DEAD-like helicases superfamily
CU254_RS02880	SM00490	helicase superfamily c-terminal domain
CU254_RS02900	SM00829	Enoylreductase
CU254_RS02920	SM00382	ATPases associated with a variety of cellular activities
CU254_RS02965	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS02985	SM01133	CU254_RS02985
CU254_RS03010	SM00422	helix_turn_helix, mercury resistance
CU254_RS03040	SM00448	cheY-homologous receiver domain
CU254_RS03040	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS03045	SM00387	Histidine kinase-like ATPases
CU254_RS03045	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS03115	SM00422	helix_turn_helix, mercury resistance
CU254_RS03120	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS03200	SM00387	Histidine kinase-like ATPases
CU254_RS03215	SM00878	Biotin carboxylase C-terminal domain
CU254_RS03300	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS03320	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS03320	SM01043	Bacterial transcriptional activator domain
CU254_RS03370	SM00448	cheY-homologous receiver domain
CU254_RS03370	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS03375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS03375	SM00387	Histidine kinase-like ATPases
CU254_RS03415	SM01209	CU254_RS03415
CU254_RS03420	SM01001	AIR carboxylase
CU254_RS03465	SM00889	Elongation factor G, domain IV
CU254_RS03570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS03620	SM00880	CU254_RS03620
CU254_RS03650	SM00495	Chitin-binding domain type 3
CU254_RS03665	SM00563	Phosphate acyltransferases
CU254_RS03680	SM00382	ATPases associated with a variety of cellular activities
CU254_RS03685	SM00382	ATPases associated with a variety of cellular activities
CU254_RS03775	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CU254_RS03800	SM00116	Domain in cystathionine beta-synthase and other proteins.
CU254_RS03800	SM00924	MgtE intracellular N domain
CU254_RS03810	SM00244	prohibitin homologues
CU254_RS03850	SM00382	ATPases associated with a variety of cellular activities
CU254_RS03870	SM00994	ClpX C4-type zinc finger
CU254_RS03915	SM00481	DNA polymerase alpha chain like domain
CU254_RS03940	SM00487	DEAD-like helicases superfamily
CU254_RS03940	SM00490	helicase superfamily c-terminal domain
CU254_RS04000	SM00450	Rhodanese Homology Domain
CU254_RS04015	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CU254_RS04040	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS04215	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS04230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS04230	SM00895	CU254_RS04230
CU254_RS04250	SM00226	Low molecular weight phosphatase family
CU254_RS04265	SM00855	Phosphoglycerate mutase family
CU254_RS04340	SM00955	CU254_RS04340
CU254_RS04370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS04370	SM00895	CU254_RS04370
CU254_RS04380	SM00382	ATPases associated with a variety of cellular activities
CU254_RS04405	SM00710	Parallel beta-helix repeats
CU254_RS04450	SM00957	SecA DEAD-like domain
CU254_RS04450	SM00958	SecA preprotein cross-linking domain
CU254_RS04470	SM01230	CU254_RS04470
CU254_RS04495	SM00344	helix_turn_helix ASNC type
CU254_RS04500	SM00450	Rhodanese Homology Domain
CU254_RS04535	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS04540	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS04545	SM00421	helix_turn_helix, Lux Regulon
CU254_RS04555	SM01043	Bacterial transcriptional activator domain
CU254_RS04590	SM00382	ATPases associated with a variety of cellular activities
CU254_RS04680	SM00495	Chitin-binding domain type 3
CU254_RS04685	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS04690	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS04720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS04730	SM00226	Low molecular weight phosphatase family
CU254_RS04735	SM01230	CU254_RS04735
CU254_RS04750	SM00341	Helicase and RNase D C-terminal
CU254_RS04810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CU254_RS04840	SM00937	CU254_RS04840
CU254_RS04845	SM00382	ATPases associated with a variety of cellular activities
CU254_RS04875	SM00421	helix_turn_helix, Lux Regulon
CU254_RS04875	SM00448	cheY-homologous receiver domain
CU254_RS04915	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS04975	SM00421	helix_turn_helix, Lux Regulon
CU254_RS04975	SM00448	cheY-homologous receiver domain
CU254_RS04995	SM00382	ATPases associated with a variety of cellular activities
CU254_RS05000	SM00487	DEAD-like helicases superfamily
CU254_RS05000	SM00490	helicase superfamily c-terminal domain
CU254_RS05000	SM00847	Helicase associated domain (HA2)  Add an annotation
CU254_RS05005	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS05040	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CU254_RS05040	SM00434	DNA Topoisomerase IV
CU254_RS05045	SM00387	Histidine kinase-like ATPases
CU254_RS05045	SM00433	TopoisomeraseII
CU254_RS05080	SM00560	LamG-like jellyroll fold domain
CU254_RS05095	SM00382	ATPases associated with a variety of cellular activities
CU254_RS05105	SM00354	helix_turn _helix lactose operon repressor
CU254_RS05190	SM00458	Ricin-type beta-trefoil
CU254_RS05215	SM00354	helix_turn _helix lactose operon repressor
CU254_RS05245	SM00267	diguanylate cyclase
CU254_RS05255	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS05270	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS05305	SM00867	YceI-like domain 
CU254_RS05310	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS05330	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS05330	SM01043	Bacterial transcriptional activator domain
CU254_RS05360	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS05375	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS05405	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS05430	SM00421	helix_turn_helix, Lux Regulon
CU254_RS05430	SM00448	cheY-homologous receiver domain
CU254_RS05495	SM00421	helix_turn_helix, Lux Regulon
CU254_RS05495	SM00448	cheY-homologous receiver domain
CU254_RS05495	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS05495	SM01043	Bacterial transcriptional activator domain
CU254_RS05585	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS05630	SM00422	helix_turn_helix, mercury resistance
CU254_RS05650	SM00382	ATPases associated with a variety of cellular activities
CU254_RS05680	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS05710	SM00448	cheY-homologous receiver domain
CU254_RS05710	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS05715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS05715	SM00387	Histidine kinase-like ATPases
CU254_RS05715	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS05750	SM01043	Bacterial transcriptional activator domain
CU254_RS05760	SM00421	helix_turn_helix, Lux Regulon
CU254_RS05760	SM00448	cheY-homologous receiver domain
CU254_RS05780	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS05800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS05825	SM00822	CU254_RS05825
CU254_RS05850	SM00563	Phosphate acyltransferases
CU254_RS05870	SM00823	Phosphopantetheine attachment site
CU254_RS05895	SM00563	Phosphate acyltransferases
CU254_RS05900	SM00822	CU254_RS05900
CU254_RS05900	SM00823	Phosphopantetheine attachment site
CU254_RS05900	SM00825	Beta-ketoacyl synthase
CU254_RS05900	SM00826	CU254_RS05900
CU254_RS05900	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS05900	SM01294	CU254_RS05900
CU254_RS05905	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS05905	SM01043	Bacterial transcriptional activator domain
CU254_RS05915	SM00641	Glycosyl hydrolases family 25
CU254_RS05930	SM00448	cheY-homologous receiver domain
CU254_RS05935	SM00100	Cyclic nucleotide-monophosphate binding domain
CU254_RS05935	SM00387	Histidine kinase-like ATPases
CU254_RS05970	SM00421	helix_turn_helix, Lux Regulon
CU254_RS06000	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS06010	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06025	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06050	SM00854	Bacterial capsule synthesis protein PGA_cap
CU254_RS06110	SM00028	Tetratricopeptide repeats
CU254_RS06110	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06110	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS06110	SM01043	Bacterial transcriptional activator domain
CU254_RS06115	SM00944	Pro-kumamolisin, activation domain
CU254_RS06145	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06165	SM00487	DEAD-like helicases superfamily
CU254_RS06165	SM00490	helicase superfamily c-terminal domain
CU254_RS06185	SM00316	Ribosomal protein S1-like RNA-binding domain
CU254_RS06185	SM00732	Likely ribonuclease with RNase H fold.
CU254_RS06190	SM00636	CU254_RS06190
CU254_RS06205	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS06245	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS06255	SM00860	SMI1 / KNR4 family
CU254_RS06330	SM00829	Enoylreductase
CU254_RS06355	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06405	SM00448	cheY-homologous receiver domain
CU254_RS06405	SM00850	LytTr DNA-binding domain
CU254_RS06410	SM00387	Histidine kinase-like ATPases
CU254_RS06425	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06435	SM00354	helix_turn _helix lactose operon repressor
CU254_RS06455	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS06485	SM00450	Rhodanese Homology Domain
CU254_RS06500	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06535	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS06550	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS06555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS06645	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS06675	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS06715	SM00893	Electron transfer flavoprotein domain
CU254_RS06720	SM00893	Electron transfer flavoprotein domain
CU254_RS06730	SM00563	Phosphate acyltransferases
CU254_RS06735	SM00829	Enoylreductase
CU254_RS06765	SM00849	Metallo-beta-lactamase superfamily
CU254_RS06785	SM00292	breast cancer carboxy-terminal domain
CU254_RS06785	SM00532	Ligase N family
CU254_RS06795	SM00740	CU254_RS06795
CU254_RS06815	SM00845	GatB domain
CU254_RS06890	SM00422	helix_turn_helix, mercury resistance
CU254_RS06890	SM00567	E-Z type HEAT repeats
CU254_RS06900	SM00248	ankyrin repeats
CU254_RS06930	SM01329	CU254_RS06930
CU254_RS06940	SM00382	ATPases associated with a variety of cellular activities
CU254_RS06950	SM00917	LeuA allosteric (dimerisation) domain
CU254_RS06990	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS07005	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07010	SM00411	bacterial (prokaryotic) histone like domain
CU254_RS07015	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS07030	SM00411	bacterial (prokaryotic) histone like domain
CU254_RS07035	SM00855	Phosphoglycerate mutase family
CU254_RS07050	SM00563	Phosphate acyltransferases
CU254_RS07065	SM00870	CU254_RS07065
CU254_RS07080	SM00448	cheY-homologous receiver domain
CU254_RS07080	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS07085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS07085	SM00387	Histidine kinase-like ATPases
CU254_RS07085	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS07095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS07140	SM00986	Uracil DNA glycosylase superfamily
CU254_RS07140	SM00987	UreE urease accessory protein, C-terminal domain 
CU254_RS07160	SM01120	CU254_RS07160
CU254_RS07160	SM01121	CU254_RS07160
CU254_RS07165	SM00487	DEAD-like helicases superfamily
CU254_RS07165	SM00490	helicase superfamily c-terminal domain
CU254_RS07195	SM00878	Biotin carboxylase C-terminal domain
CU254_RS07205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS07340	SM00358	Double-stranded RNA binding motif
CU254_RS07340	SM00535	Ribonuclease III family
CU254_RS07345	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CU254_RS07345	SM01232	CU254_RS07345
CU254_RS07365	SM01230	CU254_RS07365
CU254_RS07405	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS07415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS07420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS07420	SM00895	CU254_RS07420
CU254_RS07430	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS07440	SM00822	CU254_RS07440
CU254_RS07465	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS07470	SM00822	CU254_RS07470
CU254_RS07480	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS07495	SM00895	CU254_RS07495
CU254_RS07540	SM00882	Coenzyme A transferase
CU254_RS07545	SM00882	Coenzyme A transferase
CU254_RS07575	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS07585	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07605	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS07610	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS07620	SM00267	diguanylate cyclase
CU254_RS07630	SM00060	Fibronectin type 3 domain
CU254_RS07650	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07670	SM00354	helix_turn _helix lactose operon repressor
CU254_RS07720	SM00387	Histidine kinase-like ATPases
CU254_RS07720	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS07725	SM00448	cheY-homologous receiver domain
CU254_RS07725	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS07740	SM00968	SMC proteins Flexible Hinge Domain
CU254_RS07765	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07765	SM00962	SRP54-type protein, GTPase domain
CU254_RS07765	SM00963	SRP54-type protein, helical bundle domain
CU254_RS07775	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS07795	SM00387	Histidine kinase-like ATPases
CU254_RS07890	SM00881	CoA binding domain
CU254_RS07915	SM00938	Nitrogen regulatory protein P-II
CU254_RS07920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS07935	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS07940	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07945	SM00382	ATPases associated with a variety of cellular activities
CU254_RS07945	SM00962	SRP54-type protein, GTPase domain
CU254_RS07945	SM00963	SRP54-type protein, helical bundle domain
CU254_RS08015	SM00382	ATPases associated with a variety of cellular activities
CU254_RS08095	SM00421	helix_turn_helix, Lux Regulon
CU254_RS08095	SM00448	cheY-homologous receiver domain
CU254_RS08190	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CU254_RS08195	SM00421	helix_turn_helix, Lux Regulon
CU254_RS08195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS08255	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS08340	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS08355	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS08360	SM00060	Fibronectin type 3 domain
CU254_RS08360	SM00710	Parallel beta-helix repeats
CU254_RS08380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS08380	SM00895	CU254_RS08380
CU254_RS08405	SM00020	Trypsin-like serine protease
CU254_RS08420	SM00487	DEAD-like helicases superfamily
CU254_RS08420	SM00490	helicase superfamily c-terminal domain
CU254_RS08425	SM00090	RIO-like kinase
CU254_RS08480	SM00421	helix_turn_helix, Lux Regulon
CU254_RS08480	SM00448	cheY-homologous receiver domain
CU254_RS08550	SM00825	Beta-ketoacyl synthase
CU254_RS08565	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS08575	SM00382	ATPases associated with a variety of cellular activities
CU254_RS08630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS08630	SM00895	CU254_RS08630
CU254_RS08640	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS08655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS08655	SM00895	CU254_RS08655
CU254_RS08660	SM00481	DNA polymerase alpha chain like domain
CU254_RS08710	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS08740	SM00014	Acid phosphatase homologues
CU254_RS08750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS08785	SM00860	SMI1 / KNR4 family
CU254_RS08870	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS08925	SM00465	GIY-YIG type nucleases (URI domain)
CU254_RS08925	SM00479	CU254_RS08925
CU254_RS08970	SM00947	Carbonic anhydrase
CU254_RS08985	SM00464	Found in ATP-dependent protease La (LON)
CU254_RS09055	SM00020	Trypsin-like serine protease
CU254_RS09080	SM00382	ATPases associated with a variety of cellular activities
CU254_RS09115	SM00344	helix_turn_helix ASNC type
CU254_RS09125	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS09135	SM00422	helix_turn_helix, mercury resistance
CU254_RS09155	SM00421	helix_turn_helix, Lux Regulon
CU254_RS09155	SM00448	cheY-homologous receiver domain
CU254_RS09160	SM00421	helix_turn_helix, Lux Regulon
CU254_RS09160	SM00448	cheY-homologous receiver domain
CU254_RS09190	SM00849	Metallo-beta-lactamase superfamily
CU254_RS09225	SM00422	helix_turn_helix, mercury resistance
CU254_RS09235	SM00861	Transketolase, pyrimidine binding domain
CU254_RS09345	SM00644	CU254_RS09345
CU254_RS09345	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CU254_RS09350	SM01230	CU254_RS09350
CU254_RS09430	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS09430	SM00740	CU254_RS09430
CU254_RS09530	SM00382	ATPases associated with a variety of cellular activities
CU254_RS09530	SM00487	DEAD-like helicases superfamily
CU254_RS09530	SM00490	helicase superfamily c-terminal domain
CU254_RS09550	SM00382	ATPases associated with a variety of cellular activities
CU254_RS09580	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS09605	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS09670	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS09675	SM00382	ATPases associated with a variety of cellular activities
CU254_RS09680	SM00448	cheY-homologous receiver domain
CU254_RS09680	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS09685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS09685	SM00387	Histidine kinase-like ATPases
CU254_RS09685	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS09700	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS09755	SM00257	Lysin motif
CU254_RS09775	SM00829	Enoylreductase
CU254_RS09795	SM00020	Trypsin-like serine protease
CU254_RS09825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS09830	SM00116	Domain in cystathionine beta-synthase and other proteins.
CU254_RS09840	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS09845	SM00421	helix_turn_helix, Lux Regulon
CU254_RS09845	SM00448	cheY-homologous receiver domain
CU254_RS09875	SM00529	Helix-turn-helix diphteria tox regulatory element
CU254_RS09880	SM00450	Rhodanese Homology Domain
CU254_RS09895	SM00881	CoA binding domain
CU254_RS09915	SM00822	CU254_RS09915
CU254_RS09980	SM00422	helix_turn_helix, mercury resistance
CU254_RS10085	SM00563	Phosphate acyltransferases
CU254_RS10110	SM00245	tail specific protease
CU254_RS10120	SM00637	CU254_RS10120
CU254_RS10125	SM00028	Tetratricopeptide repeats
CU254_RS10125	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS10130	SM00479	CU254_RS10130
CU254_RS10140	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS10145	SM00636	CU254_RS10145
CU254_RS10165	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS10180	SM00421	helix_turn_helix, Lux Regulon
CU254_RS10240	SM00387	Histidine kinase-like ATPases
CU254_RS10245	SM00960	Roadblock/LC7 domain
CU254_RS10275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS10420	SM00904	Riboflavin kinase
CU254_RS10470	SM00903	Flavin reductase like domain
CU254_RS10555	SM00460	Transglutaminase/protease-like homologues
CU254_RS10605	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS10610	SM00020	Trypsin-like serine protease
CU254_RS10620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS10620	SM00866	CU254_RS10620
CU254_RS10645	SM00382	ATPases associated with a variety of cellular activities
CU254_RS10735	SM00487	DEAD-like helicases superfamily
CU254_RS10745	SM00382	ATPases associated with a variety of cellular activities
CU254_RS10770	SM01230	CU254_RS10770
CU254_RS10795	SM00421	helix_turn_helix, Lux Regulon
CU254_RS10795	SM00448	cheY-homologous receiver domain
CU254_RS10835	SM00382	ATPases associated with a variety of cellular activities
CU254_RS10945	SM00861	Transketolase, pyrimidine binding domain
CU254_RS11000	SM00448	cheY-homologous receiver domain
CU254_RS11000	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS11005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS11005	SM00387	Histidine kinase-like ATPases
CU254_RS11005	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS11020	SM00481	DNA polymerase alpha chain like domain
CU254_RS11050	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS11055	SM00341	Helicase and RNase D C-terminal
CU254_RS11055	SM00474	3'-5' exonuclease
CU254_RS11060	SM00421	helix_turn_helix, Lux Regulon
CU254_RS11060	SM00448	cheY-homologous receiver domain
CU254_RS11130	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS11260	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CU254_RS11260	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CU254_RS11300	SM00382	ATPases associated with a variety of cellular activities
CU254_RS11325	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CU254_RS11330	SM00732	Likely ribonuclease with RNase H fold.
CU254_RS11375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS11375	SM00866	CU254_RS11375
CU254_RS11405	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS11450	SM00841	Elongation factor P, C-terminal
CU254_RS11450	SM01185	CU254_RS11450
CU254_RS11460	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS11485	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CU254_RS11490	SM00851	MGS-like domain
CU254_RS11490	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CU254_RS11495	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CU254_RS11505	SM00072	Guanylate kinase homologues.
CU254_RS11510	SM01409	CU254_RS11510
CU254_RS11550	SM00100	Cyclic nucleotide-monophosphate binding domain
CU254_RS11585	SM00098	Alkaline phosphatase homologues
CU254_RS11620	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CU254_RS11620	SM00465	GIY-YIG type nucleases (URI domain)
CU254_RS11645	SM00060	Fibronectin type 3 domain
CU254_RS11675	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CU254_RS11705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS11705	SM00895	CU254_RS11705
CU254_RS11735	SM00861	Transketolase, pyrimidine binding domain
CU254_RS11755	SM00829	Enoylreductase
CU254_RS11790	SM00382	ATPases associated with a variety of cellular activities
CU254_RS11815	SM00382	ATPases associated with a variety of cellular activities
CU254_RS11865	SM00421	helix_turn_helix, Lux Regulon
CU254_RS11865	SM00448	cheY-homologous receiver domain
CU254_RS11870	SM00052	Putative diguanylate phosphodiesterase
CU254_RS11870	SM00267	diguanylate cyclase
CU254_RS11880	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS11900	SM00382	ATPases associated with a variety of cellular activities
CU254_RS11915	SM00382	ATPases associated with a variety of cellular activities
CU254_RS12030	SM00878	Biotin carboxylase C-terminal domain
CU254_RS12085	SM00382	ATPases associated with a variety of cellular activities
CU254_RS12090	SM00382	ATPases associated with a variety of cellular activities
CU254_RS12105	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS12105	SM01260	CU254_RS12105
CU254_RS12110	SM01043	Bacterial transcriptional activator domain
CU254_RS12175	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS12225	SM00822	CU254_RS12225
CU254_RS12310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS12310	SM00895	CU254_RS12310
CU254_RS12335	SM00903	Flavin reductase like domain
CU254_RS12350	SM00797	Allophanate hydrolase subunit 2
CU254_RS12355	SM00796	Allophanate hydrolase subunit 1
CU254_RS12410	SM00878	Biotin carboxylase C-terminal domain
CU254_RS12415	SM00796	Allophanate hydrolase subunit 1
CU254_RS12420	SM00797	Allophanate hydrolase subunit 2
CU254_RS12435	SM00849	Metallo-beta-lactamase superfamily
CU254_RS12465	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS12470	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS12490	SM00382	ATPases associated with a variety of cellular activities
CU254_RS12500	SM00387	Histidine kinase-like ATPases
CU254_RS12505	SM00421	helix_turn_helix, Lux Regulon
CU254_RS12505	SM00448	cheY-homologous receiver domain
CU254_RS12555	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CU254_RS12555	SM00710	Parallel beta-helix repeats
CU254_RS12560	SM00829	Enoylreductase
CU254_RS12580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS12580	SM00895	CU254_RS12580
CU254_RS12660	SM00458	Ricin-type beta-trefoil
CU254_RS12750	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS12755	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS12760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS12760	SM00895	CU254_RS12760
CU254_RS12790	SM00822	CU254_RS12790
CU254_RS12795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS12795	SM00895	CU254_RS12795
CU254_RS12815	SM00382	ATPases associated with a variety of cellular activities
CU254_RS12820	SM00382	ATPases associated with a variety of cellular activities
CU254_RS12850	SM00861	Transketolase, pyrimidine binding domain
CU254_RS12945	SM00823	Phosphopantetheine attachment site
CU254_RS12950	SM00823	Phosphopantetheine attachment site
CU254_RS12955	SM00823	Phosphopantetheine attachment site
CU254_RS12960	SM00823	Phosphopantetheine attachment site
CU254_RS12965	SM00923	MbtH-like protein
CU254_RS13055	SM00822	CU254_RS13055
CU254_RS13065	SM00271	DnaJ molecular chaperone homology domain
CU254_RS13135	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS13170	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CU254_RS13260	SM00481	DNA polymerase alpha chain like domain
CU254_RS13270	SM00878	Biotin carboxylase C-terminal domain
CU254_RS13275	SM00382	ATPases associated with a variety of cellular activities
CU254_RS13335	SM01018	B12 binding domain
CU254_RS13375	SM00382	ATPases associated with a variety of cellular activities
CU254_RS13380	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS13430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS13430	SM00866	CU254_RS13430
CU254_RS13440	SM00282	Laminin G domain
CU254_RS13440	SM00560	LamG-like jellyroll fold domain
CU254_RS13450	SM01130	CU254_RS13450
CU254_RS13455	SM00382	ATPases associated with a variety of cellular activities
CU254_RS13460	SM00382	ATPases associated with a variety of cellular activities
CU254_RS13475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS13475	SM00895	CU254_RS13475
CU254_RS13510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS13510	SM00387	Histidine kinase-like ATPases
CU254_RS13510	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS13515	SM00448	cheY-homologous receiver domain
CU254_RS13515	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS13615	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS13620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS13685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS13685	SM00895	CU254_RS13685
CU254_RS13720	SM01192	CU254_RS13720
CU254_RS13720	SM01193	CU254_RS13720
CU254_RS13730	SM00020	Trypsin-like serine protease
CU254_RS13770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS13770	SM00866	CU254_RS13770
CU254_RS13790	SM00382	ATPases associated with a variety of cellular activities
CU254_RS13795	SM01060	CU254_RS13795
CU254_RS13825	SM00507	HNH nucleases
CU254_RS13905	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS13945	SM00822	CU254_RS13945
CU254_RS13985	SM00382	ATPases associated with a variety of cellular activities
CU254_RS13990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS13990	SM00895	CU254_RS13990
CU254_RS14015	SM00382	ATPases associated with a variety of cellular activities
CU254_RS14020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS14030	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS14035	SM00382	ATPases associated with a variety of cellular activities
CU254_RS14060	SM00631	CU254_RS14060
CU254_RS14075	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS14095	SM00354	helix_turn _helix lactose operon repressor
CU254_RS14105	SM00829	Enoylreductase
CU254_RS14125	SM00829	Enoylreductase
CU254_RS14165	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS14220	SM00255	Toll - interleukin 1 - resistance
CU254_RS14235	SM00382	ATPases associated with a variety of cellular activities
CU254_RS14240	SM00020	Trypsin-like serine protease
CU254_RS14260	SM00028	Tetratricopeptide repeats
CU254_RS14260	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS14315	SM00422	helix_turn_helix, mercury resistance
CU254_RS14315	SM00871	Bacterial transcription activator, effector binding domain
CU254_RS14355	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS14435	SM00421	helix_turn_helix, Lux Regulon
CU254_RS14500	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS14515	SM00823	Phosphopantetheine attachment site
CU254_RS14530	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS14585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS14585	SM00866	CU254_RS14585
CU254_RS14600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS14600	SM00895	CU254_RS14600
CU254_RS14610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS14610	SM00895	CU254_RS14610
CU254_RS14870	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS14880	SM00267	diguanylate cyclase
CU254_RS14885	SM00857	Resolvase, N terminal domain
CU254_RS14890	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS14910	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS14935	SM00421	helix_turn_helix, Lux Regulon
CU254_RS14935	SM00448	cheY-homologous receiver domain
CU254_RS14980	SM00382	ATPases associated with a variety of cellular activities
CU254_RS14990	SM00903	Flavin reductase like domain
CU254_RS15035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS15080	SM00344	helix_turn_helix ASNC type
CU254_RS15100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS15190	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS15205	SM00903	Flavin reductase like domain
CU254_RS15245	SM00382	ATPases associated with a variety of cellular activities
CU254_RS15275	SM00895	CU254_RS15275
CU254_RS15340	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS15345	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS15360	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS15380	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS15425	SM00116	Domain in cystathionine beta-synthase and other proteins.
CU254_RS15440	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS15465	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CU254_RS15555	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS15555	SM00876	Biotin and Thiamin Synthesis associated domain
CU254_RS15615	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS15615	SM00331	Sigma factor PP2C-like phosphatases
CU254_RS15635	SM00704	CDGSH-type zinc finger. Function unknown.
CU254_RS15640	SM01236	CU254_RS15640
CU254_RS15695	SM00829	Enoylreductase
CU254_RS15705	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS15720	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS15725	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS15765	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS15790	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS15795	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CU254_RS15850	SM00822	CU254_RS15850
CU254_RS15860	SM00984	UDP binding domain
CU254_RS15920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS15985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS16005	SM00823	Phosphopantetheine attachment site
CU254_RS16005	SM01294	CU254_RS16005
CU254_RS16010	SM00823	Phosphopantetheine attachment site
CU254_RS16010	SM01294	CU254_RS16010
CU254_RS16020	SM00923	MbtH-like protein
CU254_RS16035	SM00020	Trypsin-like serine protease
CU254_RS16050	SM00100	Cyclic nucleotide-monophosphate binding domain
CU254_RS16090	SM00823	Phosphopantetheine attachment site
CU254_RS16100	SM00923	MbtH-like protein
CU254_RS16105	SM00823	Phosphopantetheine attachment site
CU254_RS16125	SM00823	Phosphopantetheine attachment site
CU254_RS16130	SM00421	helix_turn_helix, Lux Regulon
CU254_RS16135	SM00421	helix_turn_helix, Lux Regulon
CU254_RS16165	SM00421	helix_turn_helix, Lux Regulon
CU254_RS16175	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS16200	SM00116	Domain in cystathionine beta-synthase and other proteins.
CU254_RS16210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS16215	SM00421	helix_turn_helix, Lux Regulon
CU254_RS16215	SM00448	cheY-homologous receiver domain
CU254_RS16225	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS16225	SM00387	Histidine kinase-like ATPases
CU254_RS16230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS16230	SM01012	CU254_RS16230
CU254_RS16270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CU254_RS16270	SM00292	breast cancer carboxy-terminal domain
CU254_RS16270	SM00532	Ligase N family
CU254_RS16285	SM00382	ATPases associated with a variety of cellular activities
CU254_RS16290	SM00382	ATPases associated with a variety of cellular activities
CU254_RS16300	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS16300	SM01260	CU254_RS16300
CU254_RS16355	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS16355	SM01134	CU254_RS16355
CU254_RS16395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS16395	SM00895	CU254_RS16395
CU254_RS16430	SM00822	CU254_RS16430
CU254_RS16435	SM00822	CU254_RS16435
CU254_RS16440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS16440	SM00895	CU254_RS16440
CU254_RS16460	SM00382	ATPases associated with a variety of cellular activities
CU254_RS16465	SM00382	ATPases associated with a variety of cellular activities
CU254_RS16480	SM00812	Alpha-L-fucosidase
CU254_RS16495	SM00344	helix_turn_helix ASNC type
CU254_RS16500	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CU254_RS16545	SM01012	CU254_RS16545
CU254_RS16590	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS16600	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS16600	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CU254_RS16605	SM00382	ATPases associated with a variety of cellular activities
CU254_RS16640	SM00829	Enoylreductase
CU254_RS16675	SM00812	Alpha-L-fucosidase
CU254_RS16680	SM00028	Tetratricopeptide repeats
CU254_RS16680	SM00671	Sel1-like repeats.
CU254_RS16690	SM00642	Alpha-amylase domain
CU254_RS16710	SM00354	helix_turn _helix lactose operon repressor
CU254_RS16715	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CU254_RS16715	SM00710	Parallel beta-helix repeats
CU254_RS16720	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CU254_RS16720	SM00710	Parallel beta-helix repeats
CU254_RS16795	SM00829	Enoylreductase
CU254_RS16800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS16830	SM00382	ATPases associated with a variety of cellular activities
CU254_RS16855	SM00354	helix_turn _helix lactose operon repressor
CU254_RS16865	SM01012	CU254_RS16865
CU254_RS16900	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS16920	SM00903	Flavin reductase like domain
CU254_RS16925	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS16980	SM00020	Trypsin-like serine protease
CU254_RS17005	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS17110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS17155	SM00354	helix_turn _helix lactose operon repressor
CU254_RS17160	SM00606	Cellulose Binding Domain Type IV
CU254_RS17160	SM01217	CU254_RS17160
CU254_RS17235	SM00822	CU254_RS17235
CU254_RS17275	SM00822	CU254_RS17275
CU254_RS17275	SM00825	Beta-ketoacyl synthase
CU254_RS17275	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS17300	SM00382	ATPases associated with a variety of cellular activities
CU254_RS17300	SM01086	C-terminal, D2-small domain, of ClpB protein
CU254_RS17325	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS17360	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS17505	SM00382	ATPases associated with a variety of cellular activities
CU254_RS17600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS17605	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CU254_RS17605	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CU254_RS17695	SM00829	Enoylreductase
CU254_RS17700	SM00382	ATPases associated with a variety of cellular activities
CU254_RS17805	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS17830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS17830	SM00895	CU254_RS17830
CU254_RS17890	SM01091	Transporter associated domain
CU254_RS17920	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CU254_RS18015	SM00327	von Willebrand factor (vWF) type A domain
CU254_RS18020	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS18045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS18045	SM00387	Histidine kinase-like ATPases
CU254_RS18045	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS18050	SM00448	cheY-homologous receiver domain
CU254_RS18050	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS18060	SM00822	CU254_RS18060
CU254_RS18095	SM00327	von Willebrand factor (vWF) type A domain
CU254_RS18100	SM00422	helix_turn_helix, mercury resistance
CU254_RS18110	SM00382	ATPases associated with a variety of cellular activities
CU254_RS18120	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS18195	SM00382	ATPases associated with a variety of cellular activities
CU254_RS18260	SM00014	Acid phosphatase homologues
CU254_RS18260	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CU254_RS18300	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CU254_RS18305	SM00487	DEAD-like helicases superfamily
CU254_RS18305	SM00490	helicase superfamily c-terminal domain
CU254_RS18305	SM01142	CU254_RS18305
CU254_RS18330	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CU254_RS18330	SM00475	5'-3' exonuclease
CU254_RS18340	SM00344	helix_turn_helix ASNC type
CU254_RS18390	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS18405	SM00822	CU254_RS18405
CU254_RS18415	SM00641	Glycosyl hydrolases family 25
CU254_RS18475	SM00822	CU254_RS18475
CU254_RS18500	SM00382	ATPases associated with a variety of cellular activities
CU254_RS18505	SM00382	ATPases associated with a variety of cellular activities
CU254_RS18575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS18575	SM00387	Histidine kinase-like ATPases
CU254_RS18575	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS18580	SM00448	cheY-homologous receiver domain
CU254_RS18580	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS18585	SM01007	Class II Aldolase and Adducin N-terminal domain
CU254_RS18610	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS18635	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS18695	SM00822	CU254_RS18695
CU254_RS18715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS18715	SM00895	CU254_RS18715
CU254_RS18745	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS18745	SM01043	Bacterial transcriptional activator domain
CU254_RS18775	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS18775	SM00331	Sigma factor PP2C-like phosphatases
CU254_RS18795	SM00448	cheY-homologous receiver domain
CU254_RS18795	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS18800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS18800	SM00387	Histidine kinase-like ATPases
CU254_RS18800	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS18840	SM00354	helix_turn _helix lactose operon repressor
CU254_RS18860	SM00822	CU254_RS18860
CU254_RS18880	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS18960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS19020	SM00422	helix_turn_helix, mercury resistance
CU254_RS19085	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS19100	SM00487	DEAD-like helicases superfamily
CU254_RS19100	SM00490	helicase superfamily c-terminal domain
CU254_RS19125	SM00871	Bacterial transcription activator, effector binding domain
CU254_RS19140	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS19160	SM00849	Metallo-beta-lactamase superfamily
CU254_RS19230	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS19340	SM00382	ATPases associated with a variety of cellular activities
CU254_RS19370	SM00822	CU254_RS19370
CU254_RS19370	SM00823	Phosphopantetheine attachment site
CU254_RS19370	SM00825	Beta-ketoacyl synthase
CU254_RS19370	SM00826	CU254_RS19370
CU254_RS19370	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS19370	SM00829	Enoylreductase
CU254_RS19370	SM01294	CU254_RS19370
CU254_RS19375	SM00823	Phosphopantetheine attachment site
CU254_RS19375	SM00824	Thioesterase
CU254_RS19375	SM00825	Beta-ketoacyl synthase
CU254_RS19420	SM00244	prohibitin homologues
CU254_RS19490	SM00382	ATPases associated with a variety of cellular activities
CU254_RS19570	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS19595	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS19600	SM00849	Metallo-beta-lactamase superfamily
CU254_RS19605	SM00822	CU254_RS19605
CU254_RS19630	SM00855	Phosphoglycerate mutase family
CU254_RS19695	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS19730	SM00382	ATPases associated with a variety of cellular activities
CU254_RS19840	SM00822	CU254_RS19840
CU254_RS19850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS19855	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS19880	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CU254_RS19890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS19890	SM00895	CU254_RS19890
CU254_RS19895	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CU254_RS19900	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CU254_RS19905	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS19950	SM00650	Ribosomal RNA adenine dimethylases
CU254_RS20030	SM00382	ATPases associated with a variety of cellular activities
CU254_RS20065	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS20080	SM00641	Glycosyl hydrolases family 25
CU254_RS20125	SM01012	CU254_RS20125
CU254_RS20175	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS20210	SM00422	helix_turn_helix, mercury resistance
CU254_RS20225	SM00422	helix_turn_helix, mercury resistance
CU254_RS20230	SM00240	Forkhead associated domain
CU254_RS20275	SM00822	CU254_RS20275
CU254_RS20315	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CU254_RS20330	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CU254_RS20380	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CU254_RS20385	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS20410	SM00421	helix_turn_helix, Lux Regulon
CU254_RS20420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS20420	SM00895	CU254_RS20420
CU254_RS20435	SM00382	ATPases associated with a variety of cellular activities
CU254_RS20450	SM00849	Metallo-beta-lactamase superfamily
CU254_RS20470	SM00382	ATPases associated with a variety of cellular activities
CU254_RS20475	SM00923	MbtH-like protein
CU254_RS20490	SM00382	ATPases associated with a variety of cellular activities
CU254_RS20550	SM00878	Biotin carboxylase C-terminal domain
CU254_RS20645	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS20655	SM00861	Transketolase, pyrimidine binding domain
CU254_RS20695	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS20695	SM01043	Bacterial transcriptional activator domain
CU254_RS20705	SM00881	CoA binding domain
CU254_RS20710	SM00849	Metallo-beta-lactamase superfamily
CU254_RS20720	SM00849	Metallo-beta-lactamase superfamily
CU254_RS20730	SM00822	CU254_RS20730
CU254_RS20730	SM00823	Phosphopantetheine attachment site
CU254_RS20730	SM00824	Thioesterase
CU254_RS20730	SM00825	Beta-ketoacyl synthase
CU254_RS20730	SM00826	CU254_RS20730
CU254_RS20730	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS20730	SM01294	CU254_RS20730
CU254_RS20755	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS20815	SM00354	helix_turn _helix lactose operon repressor
CU254_RS20840	SM00382	ATPases associated with a variety of cellular activities
CU254_RS20850	SM00354	helix_turn _helix lactose operon repressor
CU254_RS20905	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS20915	SM00849	Metallo-beta-lactamase superfamily
CU254_RS20930	SM00829	Enoylreductase
CU254_RS20970	SM00014	Acid phosphatase homologues
CU254_RS21010	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS21030	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS21030	SM00419	helix_turn_helix, cAMP Regulatory protein
CU254_RS21035	SM00831	Cation transporter/ATPase, N-terminus
CU254_RS21050	SM00382	ATPases associated with a variety of cellular activities
CU254_RS21070	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS21200	SM00944	Pro-kumamolisin, activation domain
CU254_RS21270	SM00903	Flavin reductase like domain
CU254_RS21275	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS21285	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS21315	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS21340	SM00996	S-adenosyl-L-homocysteine hydrolase
CU254_RS21340	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CU254_RS21350	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
CU254_RS21365	SM00382	ATPases associated with a variety of cellular activities
CU254_RS21370	SM00382	ATPases associated with a variety of cellular activities
CU254_RS21395	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS21415	SM00849	Metallo-beta-lactamase superfamily
CU254_RS21435	SM00421	helix_turn_helix, Lux Regulon
CU254_RS21450	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS21450	SM00954	Region found in RelA / SpoT proteins
CU254_RS21470	SM01323	CU254_RS21470
CU254_RS21475	SM00382	ATPases associated with a variety of cellular activities
CU254_RS21560	SM00422	helix_turn_helix, mercury resistance
CU254_RS21585	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS21605	SM00382	ATPases associated with a variety of cellular activities
CU254_RS21605	SM00838	Elongation factor G C-terminus
CU254_RS21605	SM00889	Elongation factor G, domain IV
CU254_RS21635	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS21645	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CU254_RS21675	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS21675	SM01043	Bacterial transcriptional activator domain
CU254_RS21700	SM00822	CU254_RS21700
CU254_RS21720	SM00825	Beta-ketoacyl synthase
CU254_RS21740	SM00825	Beta-ketoacyl synthase
CU254_RS21745	SM00822	CU254_RS21745
CU254_RS21745	SM00823	Phosphopantetheine attachment site
CU254_RS21745	SM00825	Beta-ketoacyl synthase
CU254_RS21745	SM00826	CU254_RS21745
CU254_RS21745	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS21745	SM00829	Enoylreductase
CU254_RS21745	SM01294	CU254_RS21745
CU254_RS21850	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS21945	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS21950	SM00822	CU254_RS21950
CU254_RS21955	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CU254_RS21965	SM00642	Alpha-amylase domain
CU254_RS21975	SM00642	Alpha-amylase domain
CU254_RS21980	SM00642	Alpha-amylase domain
CU254_RS21985	SM00642	Alpha-amylase domain
CU254_RS21995	SM00642	Alpha-amylase domain
CU254_RS22000	SM00642	Alpha-amylase domain
CU254_RS22005	SM00642	Alpha-amylase domain
CU254_RS22025	SM00344	helix_turn_helix ASNC type
CU254_RS22030	SM00861	Transketolase, pyrimidine binding domain
CU254_RS22035	SM00829	Enoylreductase
CU254_RS22045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS22045	SM00895	CU254_RS22045
CU254_RS22070	SM00481	DNA polymerase alpha chain like domain
CU254_RS22145	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS22180	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS22185	SM01130	CU254_RS22185
CU254_RS22190	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS22200	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS22240	SM00823	Phosphopantetheine attachment site
CU254_RS22245	SM00382	ATPases associated with a variety of cellular activities
CU254_RS22250	SM00563	Phosphate acyltransferases
CU254_RS22275	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS22280	SM00363	S4 RNA-binding domain
CU254_RS22330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS22330	SM00895	CU254_RS22330
CU254_RS22350	SM00495	Chitin-binding domain type 3
CU254_RS22350	SM00636	CU254_RS22350
CU254_RS22380	SM00363	S4 RNA-binding domain
CU254_RS22460	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CU254_RS22480	SM00873	B3/4 domain
CU254_RS22480	SM00874	tRNA synthetase B5 domain
CU254_RS22480	SM00896	Ferredoxin-fold anticodon binding domain
CU254_RS22490	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CU254_RS22515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS22515	SM00895	CU254_RS22515
CU254_RS22530	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS22540	SM01119	CU254_RS22540
CU254_RS22585	SM00448	cheY-homologous receiver domain
CU254_RS22590	SM00091	PAS domain
CU254_RS22590	SM00387	Histidine kinase-like ATPases
CU254_RS22615	SM00060	Fibronectin type 3 domain
CU254_RS22640	SM00849	Metallo-beta-lactamase superfamily
CU254_RS22690	SM00855	Phosphoglycerate mutase family
CU254_RS22710	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS22720	SM00354	helix_turn _helix lactose operon repressor
CU254_RS22730	SM00953	CU254_RS22730
CU254_RS22745	SM00382	ATPases associated with a variety of cellular activities
CU254_RS22745	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS22770	SM00487	DEAD-like helicases superfamily
CU254_RS22770	SM00490	helicase superfamily c-terminal domain
CU254_RS22790	SM00382	ATPases associated with a variety of cellular activities
CU254_RS22810	SM00387	Histidine kinase-like ATPases
CU254_RS22815	SM00421	helix_turn_helix, Lux Regulon
CU254_RS22815	SM00448	cheY-homologous receiver domain
CU254_RS22845	SM00316	Ribosomal protein S1-like RNA-binding domain
CU254_RS22875	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CU254_RS22875	SM00474	3'-5' exonuclease
CU254_RS22875	SM00475	5'-3' exonuclease
CU254_RS22875	SM00482	DNA polymerase A domain
CU254_RS22885	SM00382	ATPases associated with a variety of cellular activities
CU254_RS22890	SM00382	ATPases associated with a variety of cellular activities
CU254_RS22910	SM00448	cheY-homologous receiver domain
CU254_RS22910	SM01012	CU254_RS22910
CU254_RS22955	SM00267	diguanylate cyclase
CU254_RS22970	SM00812	Alpha-L-fucosidase
CU254_RS23005	SM00421	helix_turn_helix, Lux Regulon
CU254_RS23010	SM00421	helix_turn_helix, Lux Regulon
CU254_RS23020	SM00421	helix_turn_helix, Lux Regulon
CU254_RS23020	SM00448	cheY-homologous receiver domain
CU254_RS23090	SM00822	CU254_RS23090
CU254_RS23150	SM00382	ATPases associated with a variety of cellular activities
CU254_RS23170	SM00421	helix_turn_helix, Lux Regulon
CU254_RS23200	SM00248	ankyrin repeats
CU254_RS23230	SM00344	helix_turn_helix ASNC type
CU254_RS23240	SM00421	helix_turn_helix, Lux Regulon
CU254_RS23275	SM00344	helix_turn_helix ASNC type
CU254_RS23280	SM00829	Enoylreductase
CU254_RS23300	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS23390	SM00382	ATPases associated with a variety of cellular activities
CU254_RS23415	SM00903	Flavin reductase like domain
CU254_RS23460	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS23475	SM00822	CU254_RS23475
CU254_RS23505	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS23515	SM00829	Enoylreductase
CU254_RS23520	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS23550	SM00880	CU254_RS23550
CU254_RS23555	SM00919	Malic enzyme, NAD binding domain
CU254_RS23555	SM01274	CU254_RS23555
CU254_RS23570	SM00986	Uracil DNA glycosylase superfamily
CU254_RS23570	SM00987	UreE urease accessory protein, C-terminal domain 
CU254_RS23595	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CU254_RS23690	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS23705	SM00823	Phosphopantetheine attachment site
CU254_RS23750	SM00822	CU254_RS23750
CU254_RS23755	SM00822	CU254_RS23755
CU254_RS23760	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS23765	SM00257	Lysin motif
CU254_RS23830	SM00829	Enoylreductase
CU254_RS23835	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS23840	SM00829	Enoylreductase
CU254_RS23850	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CU254_RS23850	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CU254_RS23895	SM00822	CU254_RS23895
CU254_RS23950	SM00882	Coenzyme A transferase
CU254_RS23955	SM00882	Coenzyme A transferase
CU254_RS23980	SM00822	CU254_RS23980
CU254_RS24025	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS24065	SM00382	ATPases associated with a variety of cellular activities
CU254_RS24095	SM00641	Glycosyl hydrolases family 25
CU254_RS24110	SM00421	helix_turn_helix, Lux Regulon
CU254_RS24115	SM00822	CU254_RS24115
CU254_RS24115	SM00895	CU254_RS24115
CU254_RS24135	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS24150	SM00382	ATPases associated with a variety of cellular activities
CU254_RS24155	SM00382	ATPases associated with a variety of cellular activities
CU254_RS24220	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS24240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS24270	SM00448	cheY-homologous receiver domain
CU254_RS24270	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS24275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS24275	SM00387	Histidine kinase-like ATPases
CU254_RS24275	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS24300	SM00422	helix_turn_helix, mercury resistance
CU254_RS24315	SM00341	Helicase and RNase D C-terminal
CU254_RS24315	SM00487	DEAD-like helicases superfamily
CU254_RS24315	SM00490	helicase superfamily c-terminal domain
CU254_RS24315	SM00956	CU254_RS24315
CU254_RS24340	SM00382	ATPases associated with a variety of cellular activities
CU254_RS24445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS24480	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS24515	SM00864	Tubulin/FtsZ family, GTPase domain
CU254_RS24515	SM00865	Tubulin/FtsZ family, C-terminal domain
CU254_RS24670	SM00460	Transglutaminase/protease-like homologues
CU254_RS24695	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CU254_RS24695	SM01232	CU254_RS24695
CU254_RS24730	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS24745	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS24750	SM00382	ATPases associated with a variety of cellular activities
CU254_RS24770	SM00843	CU254_RS24770
CU254_RS24780	SM00563	Phosphate acyltransferases
CU254_RS24795	SM00849	Metallo-beta-lactamase superfamily
CU254_RS24800	SM01130	CU254_RS24800
CU254_RS24805	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS24880	SM00316	Ribosomal protein S1-like RNA-binding domain
CU254_RS24880	SM00322	K homology RNA-binding domain
CU254_RS24885	SM01387	CU254_RS24885
CU254_RS24900	SM00904	Riboflavin kinase
CU254_RS25010	SM00421	helix_turn_helix, Lux Regulon
CU254_RS25010	SM00448	cheY-homologous receiver domain
CU254_RS25015	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS25025	SM00822	CU254_RS25025
CU254_RS25030	SM00822	CU254_RS25030
CU254_RS25045	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS25065	SM00882	Coenzyme A transferase
CU254_RS25070	SM00882	Coenzyme A transferase
CU254_RS25075	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS25090	SM00448	cheY-homologous receiver domain
CU254_RS25090	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS25095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS25095	SM00387	Histidine kinase-like ATPases
CU254_RS25095	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS25105	SM00822	CU254_RS25105
CU254_RS25130	SM00421	helix_turn_helix, Lux Regulon
CU254_RS25180	SM00382	ATPases associated with a variety of cellular activities
CU254_RS25200	SM00382	ATPases associated with a variety of cellular activities
CU254_RS25200	SM00710	Parallel beta-helix repeats
CU254_RS25255	SM00421	helix_turn_helix, Lux Regulon
CU254_RS25285	SM00354	helix_turn _helix lactose operon repressor
CU254_RS25310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS25310	SM00895	CU254_RS25310
CU254_RS25320	SM00382	ATPases associated with a variety of cellular activities
CU254_RS25330	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS25335	SM00947	Carbonic anhydrase
CU254_RS25345	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS25380	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS25390	SM00421	helix_turn_helix, Lux Regulon
CU254_RS25395	SM00354	helix_turn _helix lactose operon repressor
CU254_RS25405	SM01007	Class II Aldolase and Adducin N-terminal domain
CU254_RS25420	SM00382	ATPases associated with a variety of cellular activities
CU254_RS25480	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS25485	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS25520	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS25535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS25535	SM00895	CU254_RS25535
CU254_RS25560	SM00829	Enoylreductase
CU254_RS25680	SM00316	Ribosomal protein S1-like RNA-binding domain
CU254_RS25690	SM00829	Enoylreductase
CU254_RS25700	SM00422	helix_turn_helix, mercury resistance
CU254_RS25705	SM00382	ATPases associated with a variety of cellular activities
CU254_RS25720	SM00344	helix_turn_helix ASNC type
CU254_RS25730	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS25730	SM01043	Bacterial transcriptional activator domain
CU254_RS25755	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS25760	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS25845	SM00020	Trypsin-like serine protease
CU254_RS25890	SM00267	diguanylate cyclase
CU254_RS25935	SM00020	Trypsin-like serine protease
CU254_RS25935	SM00458	Ricin-type beta-trefoil
CU254_RS26005	SM00878	Biotin carboxylase C-terminal domain
CU254_RS26040	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS26235	SM00487	DEAD-like helicases superfamily
CU254_RS26260	SM00487	DEAD-like helicases superfamily
CU254_RS26260	SM00491	CU254_RS26260
CU254_RS26270	SM00857	Resolvase, N terminal domain
CU254_RS26300	SM00400	zinc finger
CU254_RS26300	SM00493	CU254_RS26300
CU254_RS26300	SM00766	DNA primase DnaG DnaB-binding
CU254_RS26320	SM00093	SERine  Proteinase INhibitors
CU254_RS26325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS26335	SM00421	helix_turn_helix, Lux Regulon
CU254_RS26335	SM00448	cheY-homologous receiver domain
CU254_RS26350	SM00382	ATPases associated with a variety of cellular activities
CU254_RS26440	SM01091	Transporter associated domain
CU254_RS26465	SM00271	DnaJ molecular chaperone homology domain
CU254_RS26525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS26525	SM00387	Histidine kinase-like ATPases
CU254_RS26525	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS26530	SM00448	cheY-homologous receiver domain
CU254_RS26530	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS26580	SM00829	Enoylreductase
CU254_RS26585	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS26630	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS26655	SM00829	Enoylreductase
CU254_RS26685	SM00838	Elongation factor G C-terminus
CU254_RS26720	SM00849	Metallo-beta-lactamase superfamily
CU254_RS26725	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CU254_RS26755	SM00855	Phosphoglycerate mutase family
CU254_RS26770	SM00487	DEAD-like helicases superfamily
CU254_RS26770	SM00490	helicase superfamily c-terminal domain
CU254_RS26780	SM00836	DALR anticodon binding domain
CU254_RS26780	SM01016	Arginyl tRNA synthetase N terminal dom
CU254_RS26825	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CU254_RS26845	SM00316	Ribosomal protein S1-like RNA-binding domain
CU254_RS26865	SM00382	ATPases associated with a variety of cellular activities
CU254_RS26870	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS26890	SM00562	CU254_RS26890
CU254_RS26940	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS26970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS26970	SM00895	CU254_RS26970
CU254_RS26990	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS27025	SM00382	ATPases associated with a variety of cellular activities
CU254_RS27025	SM00994	ClpX C4-type zinc finger
CU254_RS27025	SM01086	C-terminal, D2-small domain, of ClpB protein
CU254_RS27050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS27050	SM00387	Histidine kinase-like ATPases
CU254_RS27050	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS27070	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CU254_RS27105	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS27140	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS27155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS27165	SM00098	Alkaline phosphatase homologues
CU254_RS27190	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS27195	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS27200	SM00331	Sigma factor PP2C-like phosphatases
CU254_RS27205	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS27205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS27205	SM00387	Histidine kinase-like ATPases
CU254_RS27205	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS27205	SM00448	cheY-homologous receiver domain
CU254_RS27255	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS27305	SM00028	Tetratricopeptide repeats
CU254_RS27305	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS27305	SM01043	Bacterial transcriptional activator domain
CU254_RS27325	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CU254_RS27375	SM00421	helix_turn_helix, Lux Regulon
CU254_RS27375	SM00448	cheY-homologous receiver domain
CU254_RS27440	SM00422	helix_turn_helix, mercury resistance
CU254_RS27460	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS27480	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CU254_RS27480	SM01232	CU254_RS27480
CU254_RS27495	SM00849	Metallo-beta-lactamase superfamily
CU254_RS27525	SM00507	HNH nucleases
CU254_RS27540	SM00642	Alpha-amylase domain
CU254_RS27550	SM00357	Cold shock protein domain
CU254_RS27590	SM00382	ATPases associated with a variety of cellular activities
CU254_RS27600	SM00354	helix_turn _helix lactose operon repressor
CU254_RS27670	SM00564	beta-propeller repeat
CU254_RS27690	SM00829	Enoylreductase
CU254_RS27715	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS27725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS27770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS27805	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS27825	SM00382	ATPases associated with a variety of cellular activities
CU254_RS27825	SM01086	C-terminal, D2-small domain, of ClpB protein
CU254_RS27835	SM00824	Thioesterase
CU254_RS27940	SM00822	CU254_RS27940
CU254_RS27950	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS27970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS28040	SM00563	Phosphate acyltransferases
CU254_RS28050	SM00448	cheY-homologous receiver domain
CU254_RS28050	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS28055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS28055	SM00387	Histidine kinase-like ATPases
CU254_RS28055	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS28110	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CU254_RS28130	SM00822	CU254_RS28130
CU254_RS28145	SM00855	Phosphoglycerate mutase family
CU254_RS28175	SM00482	DNA polymerase A domain
CU254_RS28180	SM00382	ATPases associated with a variety of cellular activities
CU254_RS28180	SM00487	DEAD-like helicases superfamily
CU254_RS28180	SM00490	helicase superfamily c-terminal domain
CU254_RS28180	SM00847	Helicase associated domain (HA2)  Add an annotation
CU254_RS28205	SM00481	DNA polymerase alpha chain like domain
CU254_RS28215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS28215	SM00895	CU254_RS28215
CU254_RS28240	SM00382	ATPases associated with a variety of cellular activities
CU254_RS28275	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CU254_RS28280	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS28285	SM00354	helix_turn _helix lactose operon repressor
CU254_RS28320	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CU254_RS28355	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS28440	SM00421	helix_turn_helix, Lux Regulon
CU254_RS28440	SM00448	cheY-homologous receiver domain
CU254_RS28500	SM00327	von Willebrand factor (vWF) type A domain
CU254_RS28500	SM00382	ATPases associated with a variety of cellular activities
CU254_RS28545	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS28565	SM00382	ATPases associated with a variety of cellular activities
CU254_RS28575	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS28585	SM00495	Chitin-binding domain type 3
CU254_RS28630	SM00478	endonuclease III
CU254_RS28665	SM00479	CU254_RS28665
CU254_RS28750	SM00421	helix_turn_helix, Lux Regulon
CU254_RS28805	SM00421	helix_turn_helix, Lux Regulon
CU254_RS28805	SM00448	cheY-homologous receiver domain
CU254_RS28830	SM00382	ATPases associated with a variety of cellular activities
CU254_RS28930	SM00382	ATPases associated with a variety of cellular activities
CU254_RS28930	SM01086	C-terminal, D2-small domain, of ClpB protein
CU254_RS28940	SM00271	DnaJ molecular chaperone homology domain
CU254_RS28985	SM00829	Enoylreductase
CU254_RS29020	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29025	SM00886	Stress responsive A/B Barrel Domain
CU254_RS29040	SM00421	helix_turn_helix, Lux Regulon
CU254_RS29065	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS29080	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29085	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29130	SM00849	Metallo-beta-lactamase superfamily
CU254_RS29135	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS29150	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS29160	SM00421	helix_turn_helix, Lux Regulon
CU254_RS29160	SM00448	cheY-homologous receiver domain
CU254_RS29170	SM00387	Histidine kinase-like ATPases
CU254_RS29210	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS29230	SM00895	CU254_RS29230
CU254_RS29260	SM00895	CU254_RS29260
CU254_RS29260	SM00903	Flavin reductase like domain
CU254_RS29310	SM00052	Putative diguanylate phosphodiesterase
CU254_RS29310	SM00267	diguanylate cyclase
CU254_RS29330	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS29365	SM00822	CU254_RS29365
CU254_RS29375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS29375	SM00895	CU254_RS29375
CU254_RS29415	SM00422	helix_turn_helix, mercury resistance
CU254_RS29415	SM00480	DNA polymerase III beta subunit
CU254_RS29440	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS29465	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CU254_RS29490	SM00861	Transketolase, pyrimidine binding domain
CU254_RS29500	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS29540	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS29570	SM00895	CU254_RS29570
CU254_RS29575	SM01130	CU254_RS29575
CU254_RS29590	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS29615	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29620	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29650	SM00822	CU254_RS29650
CU254_RS29690	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS29730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS29755	SM00344	helix_turn_helix ASNC type
CU254_RS29765	SM00327	von Willebrand factor (vWF) type A domain
CU254_RS29770	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29775	SM00829	Enoylreductase
CU254_RS29800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS29805	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29810	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29860	SM00028	Tetratricopeptide repeats
CU254_RS29860	SM00382	ATPases associated with a variety of cellular activities
CU254_RS29860	SM01043	Bacterial transcriptional activator domain
CU254_RS29870	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CU254_RS29935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS29935	SM00866	CU254_RS29935
CU254_RS29970	SM00382	ATPases associated with a variety of cellular activities
CU254_RS30025	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS30025	SM01043	Bacterial transcriptional activator domain
CU254_RS30040	SM00382	ATPases associated with a variety of cellular activities
CU254_RS30045	SM00822	CU254_RS30045
CU254_RS30045	SM00823	Phosphopantetheine attachment site
CU254_RS30045	SM00825	Beta-ketoacyl synthase
CU254_RS30045	SM00826	CU254_RS30045
CU254_RS30045	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS30045	SM01294	CU254_RS30045
CU254_RS30050	SM00822	CU254_RS30050
CU254_RS30050	SM00823	Phosphopantetheine attachment site
CU254_RS30050	SM00825	Beta-ketoacyl synthase
CU254_RS30050	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS30055	SM00822	CU254_RS30055
CU254_RS30055	SM00823	Phosphopantetheine attachment site
CU254_RS30055	SM00825	Beta-ketoacyl synthase
CU254_RS30055	SM00826	CU254_RS30055
CU254_RS30055	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS30055	SM01294	CU254_RS30055
CU254_RS30070	SM00382	ATPases associated with a variety of cellular activities
CU254_RS30090	SM00822	CU254_RS30090
CU254_RS30090	SM00823	Phosphopantetheine attachment site
CU254_RS30090	SM00824	Thioesterase
CU254_RS30090	SM00825	Beta-ketoacyl synthase
CU254_RS30090	SM00826	CU254_RS30090
CU254_RS30090	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS30090	SM01294	CU254_RS30090
CU254_RS30100	SM00984	UDP binding domain
CU254_RS30110	SM00421	helix_turn_helix, Lux Regulon
CU254_RS30115	SM00421	helix_turn_helix, Lux Regulon
CU254_RS30120	SM00507	HNH nucleases
CU254_RS30125	SM00824	Thioesterase
CU254_RS30140	SM00822	CU254_RS30140
CU254_RS30140	SM00823	Phosphopantetheine attachment site
CU254_RS30140	SM00825	Beta-ketoacyl synthase
CU254_RS30140	SM00826	CU254_RS30140
CU254_RS30140	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS30140	SM01294	CU254_RS30140
CU254_RS30145	SM00822	CU254_RS30145
CU254_RS30145	SM00823	Phosphopantetheine attachment site
CU254_RS30145	SM00825	Beta-ketoacyl synthase
CU254_RS30145	SM00826	CU254_RS30145
CU254_RS30145	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CU254_RS30145	SM01294	CU254_RS30145
CU254_RS30205	SM00421	helix_turn_helix, Lux Regulon
CU254_RS30205	SM00448	cheY-homologous receiver domain
CU254_RS30220	SM00824	Thioesterase
CU254_RS30240	SM00344	helix_turn_helix ASNC type
CU254_RS30250	SM00861	Transketolase, pyrimidine binding domain
CU254_RS30280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS30350	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS30350	SM00478	endonuclease III
CU254_RS30350	SM01009	AlkA N-terminal domain
CU254_RS30415	SM00825	Beta-ketoacyl synthase
CU254_RS30440	SM00422	helix_turn_helix, mercury resistance
CU254_RS30450	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS30475	SM00344	helix_turn_helix ASNC type
CU254_RS30495	SM00382	ATPases associated with a variety of cellular activities
CU254_RS30500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS30530	SM00382	ATPases associated with a variety of cellular activities
CU254_RS30540	SM00849	Metallo-beta-lactamase superfamily
CU254_RS30635	SM00421	helix_turn_helix, Lux Regulon
CU254_RS30650	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS30685	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS30750	SM00960	Roadblock/LC7 domain
CU254_RS30755	SM00387	Histidine kinase-like ATPases
CU254_RS30795	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS30795	SM01134	CU254_RS30795
CU254_RS30815	SM00267	diguanylate cyclase
CU254_RS30870	SM00422	helix_turn_helix, mercury resistance
CU254_RS30875	SM00822	CU254_RS30875
CU254_RS30885	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS30900	SM00849	Metallo-beta-lactamase superfamily
CU254_RS30930	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS30935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS30935	SM00387	Histidine kinase-like ATPases
CU254_RS30935	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS30940	SM00448	cheY-homologous receiver domain
CU254_RS30940	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS30955	SM00849	Metallo-beta-lactamase superfamily
CU254_RS30990	SM00232	JAB/MPN domain
CU254_RS31035	SM00487	DEAD-like helicases superfamily
CU254_RS31035	SM00491	CU254_RS31035
CU254_RS31100	SM00834	Putative regulatory protein
CU254_RS31110	SM00344	helix_turn_helix ASNC type
CU254_RS31125	SM01120	CU254_RS31125
CU254_RS31180	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS31260	SM00382	ATPases associated with a variety of cellular activities
CU254_RS31330	SM00422	helix_turn_helix, mercury resistance
CU254_RS31355	SM00937	CU254_RS31355
CU254_RS31370	SM00020	Trypsin-like serine protease
CU254_RS31375	SM00357	Cold shock protein domain
CU254_RS31375	SM00382	ATPases associated with a variety of cellular activities
CU254_RS31375	SM00959	Rho termination factor, N-terminal domain
CU254_RS31400	SM00836	DALR anticodon binding domain
CU254_RS31400	SM01016	Arginyl tRNA synthetase N terminal dom
CU254_RS31420	SM00903	Flavin reductase like domain
CU254_RS31450	SM00450	Rhodanese Homology Domain
CU254_RS31465	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS31470	SM00450	Rhodanese Homology Domain
CU254_RS31475	SM00867	YceI-like domain 
CU254_RS31485	SM00028	Tetratricopeptide repeats
CU254_RS31485	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS31485	SM01043	Bacterial transcriptional activator domain
CU254_RS31500	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS31585	SM00421	helix_turn_helix, Lux Regulon
CU254_RS31600	SM00382	ATPases associated with a variety of cellular activities
CU254_RS31645	SM00382	ATPases associated with a variety of cellular activities
CU254_RS31660	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS31685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS31685	SM00866	CU254_RS31685
CU254_RS31705	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS31710	SM00421	helix_turn_helix, Lux Regulon
CU254_RS31710	SM00448	cheY-homologous receiver domain
CU254_RS31820	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS31855	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS31875	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS31915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS31915	SM00895	CU254_RS31915
CU254_RS31930	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS31980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS31980	SM00895	CU254_RS31980
CU254_RS31995	SM01329	CU254_RS31995
CU254_RS32110	SM00829	Enoylreductase
CU254_RS32115	SM00829	Enoylreductase
CU254_RS32125	SM00822	CU254_RS32125
CU254_RS32140	SM00878	Biotin carboxylase C-terminal domain
CU254_RS32190	SM00829	Enoylreductase
CU254_RS32195	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CU254_RS32195	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CU254_RS32200	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32210	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32230	SM00861	Transketolase, pyrimidine binding domain
CU254_RS32275	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32285	SM00919	Malic enzyme, NAD binding domain
CU254_RS32285	SM01274	CU254_RS32285
CU254_RS32305	SM00855	Phosphoglycerate mutase family
CU254_RS32325	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CU254_RS32335	SM00387	Histidine kinase-like ATPases
CU254_RS32360	SM00344	helix_turn_helix ASNC type
CU254_RS32365	SM00849	Metallo-beta-lactamase superfamily
CU254_RS32420	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CU254_RS32435	SM00957	SecA DEAD-like domain
CU254_RS32435	SM00958	SecA preprotein cross-linking domain
CU254_RS32450	SM00909	Sporulation and spore germination
CU254_RS32455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS32455	SM00387	Histidine kinase-like ATPases
CU254_RS32455	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS32460	SM00448	cheY-homologous receiver domain
CU254_RS32460	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS32465	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS32510	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS32525	SM00996	S-adenosyl-L-homocysteine hydrolase
CU254_RS32525	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CU254_RS32550	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS32640	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32645	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32655	SM00838	Elongation factor G C-terminus
CU254_RS32680	SM00387	Histidine kinase-like ATPases
CU254_RS32680	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS32685	SM00448	cheY-homologous receiver domain
CU254_RS32685	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS32695	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32705	SM00382	ATPases associated with a variety of cellular activities
CU254_RS32730	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS32745	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS32745	SM01009	AlkA N-terminal domain
CU254_RS32805	SM00020	Trypsin-like serine protease
CU254_RS32825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS32855	SM00849	Metallo-beta-lactamase superfamily
CU254_RS32865	SM01240	CU254_RS32865
CU254_RS32870	SM00670	Large family of predicted nucleotide-binding domains
CU254_RS32945	SM00849	Metallo-beta-lactamase superfamily
CU254_RS32950	SM00344	helix_turn_helix ASNC type
CU254_RS33015	SM00116	Domain in cystathionine beta-synthase and other proteins.
CU254_RS33060	SM00822	CU254_RS33060
CU254_RS33075	SM00421	helix_turn_helix, Lux Regulon
CU254_RS33090	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS33090	SM01043	Bacterial transcriptional activator domain
CU254_RS33095	SM00421	helix_turn_helix, Lux Regulon
CU254_RS33095	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS33095	SM01043	Bacterial transcriptional activator domain
CU254_RS33120	SM00421	helix_turn_helix, Lux Regulon
CU254_RS33175	SM00354	helix_turn _helix lactose operon repressor
CU254_RS33250	SM00014	Acid phosphatase homologues
CU254_RS33305	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS33310	SM00020	Trypsin-like serine protease
CU254_RS33325	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33330	SM00387	Histidine kinase-like ATPases
CU254_RS33335	SM00421	helix_turn_helix, Lux Regulon
CU254_RS33335	SM00448	cheY-homologous receiver domain
CU254_RS33350	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33390	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS33415	SM00849	Metallo-beta-lactamase superfamily
CU254_RS33475	SM00986	Uracil DNA glycosylase superfamily
CU254_RS33475	SM00987	UreE urease accessory protein, C-terminal domain 
CU254_RS33485	SM00421	helix_turn_helix, Lux Regulon
CU254_RS33485	SM00448	cheY-homologous receiver domain
CU254_RS33495	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33520	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33525	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33555	SM00822	CU254_RS33555
CU254_RS33585	SM01192	CU254_RS33585
CU254_RS33585	SM01193	CU254_RS33585
CU254_RS33595	SM00028	Tetratricopeptide repeats
CU254_RS33645	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33675	SM00487	DEAD-like helicases superfamily
CU254_RS33675	SM00490	helicase superfamily c-terminal domain
CU254_RS33675	SM00982	CU254_RS33675
CU254_RS33675	SM01058	CarD-like/TRCF domain
CU254_RS33685	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS33705	SM00421	helix_turn_helix, Lux Regulon
CU254_RS33705	SM00448	cheY-homologous receiver domain
CU254_RS33720	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS33750	SM00267	diguanylate cyclase
CU254_RS33760	SM01400	CU254_RS33760
CU254_RS33815	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33830	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33830	SM00930	CU254_RS33830
CU254_RS33835	SM00650	Ribosomal RNA adenine dimethylases
CU254_RS33840	SM01208	CU254_RS33840
CU254_RS33860	SM00382	ATPases associated with a variety of cellular activities
CU254_RS33880	SM00829	Enoylreductase
CU254_RS33915	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS33950	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS33970	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS34005	SM00917	LeuA allosteric (dimerisation) domain
CU254_RS34010	SM00421	helix_turn_helix, Lux Regulon
CU254_RS34010	SM00448	cheY-homologous receiver domain
CU254_RS34040	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS34070	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS34105	SM00060	Fibronectin type 3 domain
CU254_RS34105	SM00636	CU254_RS34105
CU254_RS34135	SM00852	Probable molybdopterin binding domain
CU254_RS34155	SM00834	Putative regulatory protein
CU254_RS34160	SM00858	CU254_RS34160
CU254_RS34170	SM00852	Probable molybdopterin binding domain
CU254_RS34180	SM00849	Metallo-beta-lactamase superfamily
CU254_RS34185	SM00387	Histidine kinase-like ATPases
CU254_RS34185	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS34190	SM00448	cheY-homologous receiver domain
CU254_RS34190	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS34225	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CU254_RS34235	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS34235	SM01134	CU254_RS34235
CU254_RS34240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS34240	SM00387	Histidine kinase-like ATPases
CU254_RS34240	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS34245	SM00448	cheY-homologous receiver domain
CU254_RS34245	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS34255	SM00421	helix_turn_helix, Lux Regulon
CU254_RS34255	SM00448	cheY-homologous receiver domain
CU254_RS34290	SM00487	DEAD-like helicases superfamily
CU254_RS34290	SM00490	helicase superfamily c-terminal domain
CU254_RS34320	SM00382	ATPases associated with a variety of cellular activities
CU254_RS34325	SM00344	helix_turn_helix ASNC type
CU254_RS34415	SM00849	Metallo-beta-lactamase superfamily
CU254_RS34565	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS34600	SM00458	Ricin-type beta-trefoil
CU254_RS34605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS34605	SM00895	CU254_RS34605
CU254_RS34625	SM00796	Allophanate hydrolase subunit 1
CU254_RS34630	SM00797	Allophanate hydrolase subunit 2
CU254_RS34640	SM00829	Enoylreductase
CU254_RS34655	SM00529	Helix-turn-helix diphteria tox regulatory element
CU254_RS34655	SM00899	CU254_RS34655
CU254_RS34785	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS34790	SM00382	ATPases associated with a variety of cellular activities
CU254_RS34805	SM00422	helix_turn_helix, mercury resistance
CU254_RS34870	SM00849	Metallo-beta-lactamase superfamily
CU254_RS34875	SM00849	Metallo-beta-lactamase superfamily
CU254_RS34990	SM00382	ATPases associated with a variety of cellular activities
CU254_RS35000	SM00387	Histidine kinase-like ATPases
CU254_RS35005	SM00421	helix_turn_helix, Lux Regulon
CU254_RS35005	SM00448	cheY-homologous receiver domain
CU254_RS35010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS35010	SM00866	CU254_RS35010
CU254_RS35090	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS35130	SM00357	Cold shock protein domain
CU254_RS35200	SM00382	ATPases associated with a variety of cellular activities
CU254_RS35220	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS35225	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS35235	SM00257	Lysin motif
CU254_RS35240	SM00852	Probable molybdopterin binding domain
CU254_RS35250	SM00919	Malic enzyme, NAD binding domain
CU254_RS35250	SM01274	CU254_RS35250
CU254_RS35270	SM00960	Roadblock/LC7 domain
CU254_RS35285	SM00960	Roadblock/LC7 domain
CU254_RS35290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS35290	SM00387	Histidine kinase-like ATPases
CU254_RS35310	SM00382	ATPases associated with a variety of cellular activities
CU254_RS35325	SM00944	Pro-kumamolisin, activation domain
CU254_RS35335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS35335	SM00387	Histidine kinase-like ATPases
CU254_RS35350	SM00487	DEAD-like helicases superfamily
CU254_RS35350	SM00490	helicase superfamily c-terminal domain
CU254_RS35370	SM00028	Tetratricopeptide repeats
CU254_RS35370	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS35370	SM01043	Bacterial transcriptional activator domain
CU254_RS35375	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS35390	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS35395	SM00357	Cold shock protein domain
CU254_RS35405	SM00852	Probable molybdopterin binding domain
CU254_RS35415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS35445	SM00382	ATPases associated with a variety of cellular activities
CU254_RS35445	SM01072	Cell division protein 48 (CDC48) domain 2
CU254_RS35445	SM01073	Cell division protein 48 (CDC48) N-terminal domain
CU254_RS35490	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS35500	SM00829	Enoylreductase
CU254_RS35545	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS35555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS35555	SM00866	CU254_RS35555
CU254_RS35605	SM00028	Tetratricopeptide repeats
CU254_RS35605	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS35605	SM01043	Bacterial transcriptional activator domain
CU254_RS35660	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS35700	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS35735	SM00881	CoA binding domain
CU254_RS35745	SM00448	cheY-homologous receiver domain
CU254_RS35745	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS35750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS35750	SM00387	Histidine kinase-like ATPases
CU254_RS35750	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS35765	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS35830	SM00421	helix_turn_helix, Lux Regulon
CU254_RS35830	SM00448	cheY-homologous receiver domain
CU254_RS35845	SM00903	Flavin reductase like domain
CU254_RS35850	SM00091	PAS domain
CU254_RS35850	SM00387	Histidine kinase-like ATPases
CU254_RS35875	SM00822	CU254_RS35875
CU254_RS35890	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS35960	SM00382	ATPases associated with a variety of cellular activities
CU254_RS35970	SM01058	CarD-like/TRCF domain
CU254_RS36000	SM00840	CU254_RS36000
CU254_RS36005	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CU254_RS36025	SM01007	Class II Aldolase and Adducin N-terminal domain
CU254_RS36045	SM01120	CU254_RS36045
CU254_RS36055	SM00855	Phosphoglycerate mutase family
CU254_RS36060	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS36060	SM01134	CU254_RS36060
CU254_RS36105	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS36105	SM01134	CU254_RS36105
CU254_RS36115	SM00382	ATPases associated with a variety of cellular activities
CU254_RS36125	SM00354	helix_turn _helix lactose operon repressor
CU254_RS36130	SM00947	Carbonic anhydrase
CU254_RS36135	SM00478	endonuclease III
CU254_RS36140	SM00644	CU254_RS36140
CU254_RS36140	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CU254_RS36175	SM00382	ATPases associated with a variety of cellular activities
CU254_RS36195	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS36195	SM01043	Bacterial transcriptional activator domain
CU254_RS36220	SM00382	ATPases associated with a variety of cellular activities
CU254_RS36220	SM01086	C-terminal, D2-small domain, of ClpB protein
CU254_RS36235	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS36305	SM00422	helix_turn_helix, mercury resistance
CU254_RS36315	SM00905	Dihydroneopterin aldolase
CU254_RS36330	SM00382	ATPases associated with a variety of cellular activities
CU254_RS36420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS36450	SM00382	ATPases associated with a variety of cellular activities
CU254_RS36475	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CU254_RS36475	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CU254_RS36475	SM00493	CU254_RS36475
CU254_RS36505	SM00487	DEAD-like helicases superfamily
CU254_RS36505	SM00490	helicase superfamily c-terminal domain
CU254_RS36510	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CU254_RS36605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS36675	SM00824	Thioesterase
CU254_RS36680	SM00823	Phosphopantetheine attachment site
CU254_RS36690	SM00823	Phosphopantetheine attachment site
CU254_RS36700	SM00421	helix_turn_helix, Lux Regulon
CU254_RS36755	SM00478	endonuclease III
CU254_RS36755	SM00525	CU254_RS36755
CU254_RS36765	SM00100	Cyclic nucleotide-monophosphate binding domain
CU254_RS36765	SM00419	helix_turn_helix, cAMP Regulatory protein
CU254_RS36780	SM00480	DNA polymerase III beta subunit
CU254_RS36790	SM00849	Metallo-beta-lactamase superfamily
CU254_RS36930	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CU254_RS36960	SM00917	LeuA allosteric (dimerisation) domain
CU254_RS36965	SM00420	helix_turn_helix, Deoxyribose operon repressor
CU254_RS37015	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37020	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37085	SM00493	CU254_RS37085
CU254_RS37095	SM00646	CU254_RS37095
CU254_RS37105	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37125	SM00960	Roadblock/LC7 domain
CU254_RS37130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS37130	SM00387	Histidine kinase-like ATPases
CU254_RS37145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS37145	SM00387	Histidine kinase-like ATPases
CU254_RS37145	SM00388	His Kinase A (phosphoacceptor) domain
CU254_RS37150	SM00448	cheY-homologous receiver domain
CU254_RS37150	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS37190	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CU254_RS37205	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS37215	SM00331	Sigma factor PP2C-like phosphatases
CU254_RS37215	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CU254_RS37265	SM00854	Bacterial capsule synthesis protein PGA_cap
CU254_RS37325	SM01130	CU254_RS37325
CU254_RS37345	SM00344	helix_turn_helix ASNC type
CU254_RS37350	SM00560	LamG-like jellyroll fold domain
CU254_RS37375	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS37405	SM00267	diguanylate cyclase
CU254_RS37430	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37455	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS37475	SM00450	Rhodanese Homology Domain
CU254_RS37495	SM00796	Allophanate hydrolase subunit 1
CU254_RS37500	SM00797	Allophanate hydrolase subunit 2
CU254_RS37560	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37610	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS37625	SM00641	Glycosyl hydrolases family 25
CU254_RS37630	SM00641	Glycosyl hydrolases family 25
CU254_RS37660	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37675	SM01211	CU254_RS37675
CU254_RS37720	SM00849	Metallo-beta-lactamase superfamily
CU254_RS37745	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS37770	SM00382	ATPases associated with a variety of cellular activities
CU254_RS37780	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS37785	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS37790	SM00998	Adenylosuccinate lyase C-terminus
CU254_RS37795	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CU254_RS37815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS37815	SM00895	CU254_RS37815
CU254_RS37820	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS37900	SM01209	CU254_RS37900
CU254_RS37900	SM01210	CU254_RS37900
CU254_RS37940	SM00788	Adenylosuccinate synthetase
CU254_RS37970	SM00267	diguanylate cyclase
CU254_RS37980	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS38000	SM00849	Metallo-beta-lactamase superfamily
CU254_RS38020	SM00822	CU254_RS38020
CU254_RS38035	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS38115	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS38125	SM00867	YceI-like domain 
CU254_RS38160	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38175	SM00354	helix_turn _helix lactose operon repressor
CU254_RS38230	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38235	SM00822	CU254_RS38235
CU254_RS38265	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38265	SM01086	C-terminal, D2-small domain, of ClpB protein
CU254_RS38280	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS38300	SM00422	helix_turn_helix, mercury resistance
CU254_RS38305	SM00271	DnaJ molecular chaperone homology domain
CU254_RS38380	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS38445	SM00421	helix_turn_helix, Lux Regulon
CU254_RS38450	SM00986	Uracil DNA glycosylase superfamily
CU254_RS38450	SM00987	UreE urease accessory protein, C-terminal domain 
CU254_RS38480	SM00883	Chaperonin 10 Kd subunit
CU254_RS38520	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38530	SM00062	Bacterial periplasmic substrate-binding proteins
CU254_RS38530	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CU254_RS38545	SM00460	Transglutaminase/protease-like homologues
CU254_RS38575	SM00861	Transketolase, pyrimidine binding domain
CU254_RS38590	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38595	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38640	SM00822	CU254_RS38640
CU254_RS38655	SM00422	helix_turn_helix, mercury resistance
CU254_RS38665	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS38700	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS38720	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38780	SM00421	helix_turn_helix, Lux Regulon
CU254_RS38780	SM00448	cheY-homologous receiver domain
CU254_RS38785	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38795	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38820	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38830	SM00421	helix_turn_helix, Lux Regulon
CU254_RS38830	SM00448	cheY-homologous receiver domain
CU254_RS38865	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS38920	SM00518	AP endonuclease family 2
CU254_RS38980	SM00382	ATPases associated with a variety of cellular activities
CU254_RS38985	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CU254_RS39025	SM00421	helix_turn_helix, Lux Regulon
CU254_RS39025	SM00448	cheY-homologous receiver domain
CU254_RS39055	SM00822	CU254_RS39055
CU254_RS39060	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39130	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CU254_RS39175	SM00646	CU254_RS39175
CU254_RS39195	SM00470	ParB-like nuclease domain
CU254_RS39210	SM00393	Putative single-stranded nucleic acids-binding domain
CU254_RS39220	SM01234	CU254_RS39220
CU254_RS39235	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39235	SM00760	Bacterial dnaA protein helix-turn-helix domain
CU254_RS39240	SM00480	DNA polymerase III beta subunit
CU254_RS39245	SM01350	CU254_RS39245
CU254_RS39260	SM00387	Histidine kinase-like ATPases
CU254_RS39260	SM00433	TopoisomeraseII
CU254_RS39265	SM00434	DNA Topoisomerase IV
CU254_RS39310	SM00248	ankyrin repeats
CU254_RS39315	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS39355	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39365	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS39440	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39450	SM00421	helix_turn_helix, Lux Regulon
CU254_RS39450	SM00448	cheY-homologous receiver domain
CU254_RS39460	SM00829	Enoylreductase
CU254_RS39475	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39490	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS39490	SM00740	CU254_RS39490
CU254_RS39495	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS39510	SM00331	Sigma factor PP2C-like phosphatases
CU254_RS39510	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CU254_RS39515	SM00240	Forkhead associated domain
CU254_RS39520	SM00240	Forkhead associated domain
CU254_RS39560	SM00020	Trypsin-like serine protease
CU254_RS39565	SM00020	Trypsin-like serine protease
CU254_RS39575	SM00231	Coagulation factor 5/8 C-terminal domain, discoidin domain
CU254_RS39600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS39600	SM00895	CU254_RS39600
CU254_RS39620	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39625	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39675	SM01400	CU254_RS39675
CU254_RS39705	SM00422	helix_turn_helix, mercury resistance
CU254_RS39730	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS39765	SM00382	ATPases associated with a variety of cellular activities
CU254_RS39800	SM00822	CU254_RS39800
CU254_RS39805	SM00984	UDP binding domain
CU254_RS39835	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS39840	SM00387	Histidine kinase-like ATPases
CU254_RS39845	SM00421	helix_turn_helix, Lux Regulon
CU254_RS39845	SM00448	cheY-homologous receiver domain
CU254_RS39910	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CU254_RS39910	SM01232	CU254_RS39910
CU254_RS39920	SM00387	Histidine kinase-like ATPases
CU254_RS39930	SM00448	cheY-homologous receiver domain
CU254_RS39930	SM00850	LytTr DNA-binding domain
CU254_RS39945	SM00450	Rhodanese Homology Domain
CU254_RS39985	SM00421	helix_turn_helix, Lux Regulon
CU254_RS40030	SM00346	helix_turn_helix isocitrate lyase regulation
CU254_RS40060	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CU254_RS40080	SM00421	helix_turn_helix, Lux Regulon
CU254_RS40080	SM00448	cheY-homologous receiver domain
CU254_RS40085	SM00894	Excalibur calcium-binding domain
CU254_RS40090	SM00479	CU254_RS40090
CU254_RS40115	SM00506	Appr-1"-p processing enzyme
CU254_RS40125	SM00855	Phosphoglycerate mutase family
CU254_RS40205	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS40205	SM01043	Bacterial transcriptional activator domain
CU254_RS40265	SM00822	CU254_RS40265
CU254_RS40300	SM00563	Phosphate acyltransferases
CU254_RS40325	SM00014	Acid phosphatase homologues
CU254_RS40360	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS40430	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40460	SM00829	Enoylreductase
CU254_RS40470	SM00347	helix_turn_helix multiple antibiotic resistance protein
CU254_RS40505	SM00822	CU254_RS40505
CU254_RS40515	SM00448	cheY-homologous receiver domain
CU254_RS40520	SM00387	Histidine kinase-like ATPases
CU254_RS40525	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40555	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40555	SM00421	helix_turn_helix, Lux Regulon
CU254_RS40570	SM00344	helix_turn_helix ASNC type
CU254_RS40580	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CU254_RS40580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CU254_RS40605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS40605	SM00895	CU254_RS40605
CU254_RS40675	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40680	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40695	SM00421	helix_turn_helix, Lux Regulon
CU254_RS40695	SM00448	cheY-homologous receiver domain
CU254_RS40710	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40740	SM00671	Sel1-like repeats.
CU254_RS40760	SM00421	helix_turn_helix, Lux Regulon
CU254_RS40820	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS40845	SM00382	ATPases associated with a variety of cellular activities
CU254_RS40935	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS40940	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS41090	SM00028	Tetratricopeptide repeats
CU254_RS41090	SM00862	Transcriptional regulatory protein, C terminal
CU254_RS41090	SM01043	Bacterial transcriptional activator domain
CU254_RS41185	SM00357	Cold shock protein domain
CU254_RS41200	SM00220	Serine/Threonine protein kinases, catalytic domain
CU254_RS41200	SM01260	CU254_RS41200
CU254_RS41235	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS41255	SM00028	Tetratricopeptide repeats
CU254_RS41300	SM00020	Trypsin-like serine protease
CU254_RS41340	SM01260	CU254_RS41340
CU254_RS41355	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS41365	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS41375	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS41425	SM00421	helix_turn_helix, Lux Regulon
CU254_RS41575	SM00944	Pro-kumamolisin, activation domain
CU254_RS41605	SM00267	diguanylate cyclase
CU254_RS41685	SM00487	DEAD-like helicases superfamily
CU254_RS41870	SM00271	DnaJ molecular chaperone homology domain
CU254_RS41985	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS42045	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CU254_RS42080	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CU254_RS42100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CU254_RS42100	SM00895	CU254_RS42100
CU254_RS42110	SM00342	helix_turn_helix, arabinose operon control protein
CU254_RS42115	SM00729	Elongator protein 3, MiaB family, Radical SAM
CU254_RS42200	SM00481	DNA polymerase alpha chain like domain
CU254_RS42230	SM00857	Resolvase, N terminal domain
CU254_RS42235	SM00382	ATPases associated with a variety of cellular activities
CU254_RS42310	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS42330	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS42335	SM00530	Helix-turn-helix XRE-family like proteins 
CU254_RS42380	SM00470	ParB-like nuclease domain
CU254_RS42495	SM00530	Helix-turn-helix XRE-family like proteins 
