locus-tag class description YIM_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix YIM_RS00005 PF00308 Bacterial dnaA protein YIM_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain YIM_RS00015 PF02767 DNA polymerase III beta subunit, central domain YIM_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain YIM_RS00020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS00020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YIM_RS00025 PF02463 RecF/RecN/SMC N terminal domain YIM_RS00030 PF05258 Dna[CI] antecedent, DciA YIM_RS00035 PF00204 DNA gyrase B YIM_RS00035 PF00986 DNA gyrase B subunit, carboxyl terminus YIM_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS00035 PF01751 Toprim domain YIM_RS00040 PF00521 DNA gyrase/topoisomerase IV, subunit A YIM_RS00040 PF03989 DNA gyrase C-terminal domain, beta-propeller YIM_RS00045 PF12089 Transmembrane domain of unknown function (DUF3566) YIM_RS00090 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS00125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YIM_RS00135 PF10756 Bacterial PH domain YIM_RS00140 PF06781 Cell division protein CrgA YIM_RS00145 PF04203 Sortase domain YIM_RS00150 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS00155 PF00117 Glutamine amidotransferase class-I YIM_RS00165 PF03795 YCII-related domain YIM_RS00170 PF00069 Protein kinase domain YIM_RS00170 PF03793 PASTA domain YIM_RS00175 PF00069 Protein kinase domain YIM_RS00180 PF00905 Penicillin binding protein transpeptidase domain YIM_RS00185 PF01098 Cell cycle protein YIM_RS00195 PF16697 Inner membrane component of T3SS, cytoplasmic domain YIM_RS00200 PF00498 FHA domain YIM_RS00200 PF12401 Protein of unknown function (DUF2662) YIM_RS00225 PF14032 PknH-like extracellular domain YIM_RS00225 PF00069 Protein kinase domain YIM_RS00240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YIM_RS00250 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS00255 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_RS00270 PF00392 Bacterial regulatory proteins, gntR family YIM_RS00270 PF07729 FCD domain YIM_RS00275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS00280 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS00285 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS00285 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS00290 PF00005 ABC transporter YIM_RS00290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS00295 PF00005 ABC transporter YIM_RS00295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS00300 PF00171 Aldehyde dehydrogenase family YIM_RS00310 PF01425 Amidase YIM_RS00320 PF12897 Alanine-glyoxylate amino-transferase YIM_RS00335 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS00340 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS00345 PF00069 Protein kinase domain YIM_RS00350 PF00069 Protein kinase domain YIM_RS00350 PF14032 PknH-like extracellular domain YIM_RS00355 PF00069 Protein kinase domain YIM_RS00355 PF14032 PknH-like extracellular domain YIM_RS00365 PF13460 NAD(P)H-binding YIM_RS00370 PF04030 D-arabinono-1,4-lactone oxidase YIM_RS00370 PF01565 FAD binding domain YIM_RS00385 PF00232 Glycosyl hydrolase family 1 YIM_RS00390 PF07690 Major Facilitator Superfamily YIM_RS00440 PF02028 BCCT, betaine/carnitine/choline family transporter YIM_RS00445 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS00450 PF00005 ABC transporter YIM_RS00450 PF00571 CBS domain YIM_RS00455 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS00460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YIM_RS00480 PF00106 short chain dehydrogenase YIM_RS00485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YIM_RS00485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YIM_RS00485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YIM_RS00490 PF00892 EamA-like transporter family YIM_RS00530 PF07690 Major Facilitator Superfamily YIM_RS00540 PF07730 Histidine kinase YIM_RS00545 PF00196 Bacterial regulatory proteins, luxR family YIM_RS00545 PF00072 Response regulator receiver domain YIM_RS00565 PF00534 Glycosyl transferases group 1 YIM_RS00565 PF13439 Glycosyltransferase Family 4 YIM_RS00610 PF01625 Peptide methionine sulfoxide reductase YIM_RS00615 PF02225 PA domain YIM_RS00615 PF04389 Peptidase family M28 YIM_RS00635 PF18416 N-acetylglucosamine binding protein domain 2 YIM_RS00635 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_RS00655 PF06827 Zinc finger found in FPG and IleRS YIM_RS00655 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_RS00660 PF07694 5TMR of 5TMR-LYT YIM_RS00660 PF06580 Histidine kinase YIM_RS00665 PF06965 Na+/H+ antiporter 1 YIM_RS00665 PF01343 Peptidase family S49 YIM_RS00670 PF03422 Carbohydrate binding module (family 6) YIM_RS00670 PF00457 Glycosyl hydrolases family 11 YIM_RS00675 PF04397 LytTr DNA-binding domain YIM_RS00675 PF00072 Response regulator receiver domain YIM_RS00685 PF00474 Sodium:solute symporter family YIM_RS00690 PF04341 Protein of unknown function, DUF485 YIM_RS00695 PF00474 Sodium:solute symporter family YIM_RS00720 PF00067 Cytochrome P450 YIM_RS00725 PF00293 NUDIX domain YIM_RS00740 PF04545 Sigma-70, region 4 YIM_RS00740 PF04542 Sigma-70 region 2 YIM_RS00740 PF04539 Sigma-70 region 3 YIM_RS00750 PF00210 Ferritin-like domain YIM_RS00780 PF02768 DNA polymerase III beta subunit, C-terminal domain YIM_RS00780 PF02767 DNA polymerase III beta subunit, central domain YIM_RS00780 PF00712 DNA polymerase III beta subunit, N-terminal domain YIM_RS00835 PF01654 Cytochrome bd terminal oxidase subunit I YIM_RS00840 PF02322 Cytochrome bd terminal oxidase subunit II YIM_RS00845 PF00664 ABC transporter transmembrane region YIM_RS00845 PF00005 ABC transporter YIM_RS00850 PF13492 GAF domain YIM_RS00850 PF13185 GAF domain YIM_RS00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS00850 PF07730 Histidine kinase YIM_RS00855 PF00857 Isochorismatase family YIM_RS00860 PF00196 Bacterial regulatory proteins, luxR family YIM_RS00860 PF00072 Response regulator receiver domain YIM_RS00890 PF04434 SWIM zinc finger YIM_RS00900 PF00485 Phosphoribulokinase / Uridine kinase family YIM_RS00905 PF01661 Macro domain YIM_RS00910 PF01842 ACT domain YIM_RS00910 PF00800 Prephenate dehydratase YIM_RS00915 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS00920 PF03070 TENA/THI-4/PQQC family YIM_RS00945 PF00106 short chain dehydrogenase YIM_RS00960 PF13845 Septum formation YIM_RS00970 PF03738 Glutathionylspermidine synthase preATP-grasp YIM_RS00975 PF03994 Domain of Unknown Function (DUF350) YIM_RS00980 PF00561 alpha/beta hydrolase fold YIM_RS00985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_RS00985 PF02403 Seryl-tRNA synthetase N-terminal domain YIM_RS01000 PF01266 FAD dependent oxidoreductase YIM_RS01015 PF00196 Bacterial regulatory proteins, luxR family YIM_RS01050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS01055 PF01370 NAD dependent epimerase/dehydratase family YIM_RS01060 PF13439 Glycosyltransferase Family 4 YIM_RS01065 PF14602 Hexapeptide repeat of succinyl-transferase YIM_RS01065 PF12464 Maltose acetyltransferase YIM_RS01090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS01090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS01095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS01105 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS01110 PF00550 Phosphopantetheine attachment site YIM_RS01120 PF13193 AMP-binding enzyme C-terminal domain YIM_RS01120 PF00501 AMP-binding enzyme YIM_RS01155 PF01553 Acyltransferase YIM_RS01165 PF00296 Luciferase-like monooxygenase YIM_RS01175 PF03275 UDP-galactopyranose mutase YIM_RS01180 PF01569 PAP2 superfamily YIM_RS01185 PF01040 UbiA prenyltransferase family YIM_RS01215 PF00106 short chain dehydrogenase YIM_RS01220 PF04030 D-arabinono-1,4-lactone oxidase YIM_RS01220 PF01565 FAD binding domain YIM_RS01225 PF04138 GtrA-like protein YIM_RS01230 PF17994 Galactofuranosyltransferase 2 N-terminal YIM_RS01265 PF00005 ABC transporter YIM_RS01270 PF01061 ABC-2 type transporter YIM_RS01280 PF10759 Protein of unknown function (DUF2587) YIM_RS01285 PF00266 Aminotransferase class-V YIM_RS01290 PF00107 Zinc-binding dehydrogenase YIM_RS01290 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS01295 PF04389 Peptidase family M28 YIM_RS01295 PF02225 PA domain YIM_RS01300 PF04228 Putative neutral zinc metallopeptidase YIM_RS01350 PF05922 Peptidase inhibitor I9 YIM_RS01350 PF00082 Subtilase family YIM_RS01355 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS01355 PF13191 AAA ATPase domain YIM_RS01360 PF12146 Serine aminopeptidase, S33 YIM_RS01365 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS01365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS01365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS01370 PF13380 CoA binding domain YIM_RS01370 PF13607 Succinyl-CoA ligase like flavodoxin domain YIM_RS01375 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS01375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS01375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS01380 PF13460 NAD(P)H-binding YIM_RS01395 PF13492 GAF domain YIM_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS01395 PF07730 Histidine kinase YIM_RS01400 PF00072 Response regulator receiver domain YIM_RS01400 PF00196 Bacterial regulatory proteins, luxR family YIM_RS01405 PF07690 Major Facilitator Superfamily YIM_RS01415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_RS01415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_RS01420 PF00672 HAMP domain YIM_RS01420 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS01430 PF02735 Ku70/Ku80 beta-barrel domain YIM_RS01435 PF01068 ATP dependent DNA ligase domain YIM_RS01435 PF04679 ATP dependent DNA ligase C terminal region YIM_RS01435 PF13298 DNA polymerase Ligase (LigD) YIM_RS01440 PF04072 Leucine carboxyl methyltransferase YIM_RS01445 PF04542 Sigma-70 region 2 YIM_RS01445 PF04539 Sigma-70 region 3 YIM_RS01445 PF04545 Sigma-70, region 4 YIM_RS01460 PF00155 Aminotransferase class I and II YIM_RS01465 PF01738 Dienelactone hydrolase family YIM_RS01485 PF13193 AMP-binding enzyme C-terminal domain YIM_RS01485 PF00501 AMP-binding enzyme YIM_RS01525 PF09015 NgoMIV restriction enzyme YIM_RS01530 PF00145 C-5 cytosine-specific DNA methylase YIM_RS01535 PF03852 DNA mismatch endonuclease Vsr YIM_RS01560 PF07729 FCD domain YIM_RS01560 PF00392 Bacterial regulatory proteins, gntR family YIM_RS01585 PF10604 Polyketide cyclase / dehydrase and lipid transport YIM_RS01590 PF00248 Aldo/keto reductase family YIM_RS01595 PF09997 Predicted membrane protein (DUF2238) YIM_RS01630 PF07730 Histidine kinase YIM_RS01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS01635 PF00196 Bacterial regulatory proteins, luxR family YIM_RS01645 PF00575 S1 RNA binding domain YIM_RS01645 PF17674 HHH domain YIM_RS01645 PF09371 Tex-like protein N-terminal domain YIM_RS01645 PF16921 Tex protein YqgF-like domain YIM_RS01650 PF01272 Transcription elongation factor, GreA/GreB, C-term YIM_RS01660 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS01660 PF01799 [2Fe-2S] binding domain YIM_RS01665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YIM_RS01665 PF00034 Cytochrome c YIM_RS01665 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS01690 PF13732 Domain of unknown function (DUF4162) YIM_RS01690 PF00005 ABC transporter YIM_RS01715 PF02153 Prephenate dehydrogenase YIM_RS01720 PF07687 Peptidase dimerisation domain YIM_RS01720 PF01546 Peptidase family M20/M25/M40 YIM_RS01730 PF14437 MafB19-like deaminase YIM_RS01735 PF05532 CsbD-like YIM_RS01745 PF00561 alpha/beta hydrolase fold YIM_RS01775 PF01580 FtsK/SpoIIIE family YIM_RS01800 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS01800 PF00672 HAMP domain YIM_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS01805 PF00072 Response regulator receiver domain YIM_RS01805 PF00486 Transcriptional regulatory protein, C terminal YIM_RS01820 PF13185 GAF domain YIM_RS01820 PF07730 Histidine kinase YIM_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS01820 PF13492 GAF domain YIM_RS01825 PF00196 Bacterial regulatory proteins, luxR family YIM_RS01825 PF00072 Response regulator receiver domain YIM_RS01830 PF09186 Domain of unknown function (DUF1949) YIM_RS01830 PF01205 Uncharacterized protein family UPF0029 YIM_RS01845 PF02861 Clp amino terminal domain, pathogenicity island component YIM_RS01860 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YIM_RS01860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS01900 PF00072 Response regulator receiver domain YIM_RS01900 PF00196 Bacterial regulatory proteins, luxR family YIM_RS01910 PF00072 Response regulator receiver domain YIM_RS01910 PF00486 Transcriptional regulatory protein, C terminal YIM_RS01915 PF00672 HAMP domain YIM_RS01915 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS01915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS01920 PF09423 PhoD-like phosphatase YIM_RS01920 PF16655 PhoD-like phosphatase, N-terminal domain YIM_RS01930 PF12169 DNA polymerase III subunits gamma and tau domain III YIM_RS01935 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_RS01940 PF01638 HxlR-like helix-turn-helix YIM_RS01945 PF01520 N-acetylmuramoyl-L-alanine amidase YIM_RS01950 PF02575 YbaB/EbfC DNA-binding family YIM_RS01955 PF02132 RecR protein YIM_RS01955 PF13662 Toprim domain YIM_RS01965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS01975 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS01980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS01980 PF00005 ABC transporter YIM_RS01985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS01985 PF00005 ABC transporter YIM_RS01990 PF13460 NAD(P)H-binding YIM_RS01995 PF00892 EamA-like transporter family YIM_RS02000 PF03466 LysR substrate binding domain YIM_RS02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS02020 PF00682 HMGL-like YIM_RS02020 PF08502 LeuA allosteric (dimerisation) domain YIM_RS02045 PF00696 Amino acid kinase family YIM_RS02045 PF01842 ACT domain YIM_RS02045 PF13840 ACT domain YIM_RS02050 PF01118 Semialdehyde dehydrogenase, NAD binding domain YIM_RS02050 PF02774 Semialdehyde dehydrogenase, dimerisation domain YIM_RS02060 PF01139 tRNA-splicing ligase RtcB YIM_RS02075 PF06628 Catalase-related immune-responsive YIM_RS02075 PF00199 Catalase YIM_RS02090 PF07859 alpha/beta hydrolase fold YIM_RS02095 PF03358 NADPH-dependent FMN reductase YIM_RS02100 PF02566 OsmC-like protein YIM_RS02105 PF00210 Ferritin-like domain YIM_RS02110 PF00326 Prolyl oligopeptidase family YIM_RS02115 PF01209 ubiE/COQ5 methyltransferase family YIM_RS02130 PF00149 Calcineurin-like phosphoesterase YIM_RS02135 PF17092 Penicillin-binding protein OB-like domain YIM_RS02135 PF00905 Penicillin binding protein transpeptidase domain YIM_RS02135 PF00912 Transglycosylase YIM_RS02140 PF02467 Transcription factor WhiB YIM_RS02145 PF02374 Anion-transporting ATPase YIM_RS02150 PF02374 Anion-transporting ATPase YIM_RS02160 PF01674 Lipase (class 2) YIM_RS02200 PF00027 Cyclic nucleotide-binding domain YIM_RS02200 PF13545 Crp-like helix-turn-helix domain YIM_RS02210 PF10576 Iron-sulfur binding domain of endonuclease III YIM_RS02210 PF00633 Helix-hairpin-helix motif YIM_RS02210 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_RS02215 PF00578 AhpC/TSA family YIM_RS02225 PF02674 Colicin V production protein YIM_RS02230 PF00561 alpha/beta hydrolase fold YIM_RS02240 PF06965 Na+/H+ antiporter 1 YIM_RS02245 PF00854 POT family YIM_RS02260 PF00083 Sugar (and other) transporter YIM_RS02265 PF07729 FCD domain YIM_RS02265 PF00392 Bacterial regulatory proteins, gntR family YIM_RS02290 PF13193 AMP-binding enzyme C-terminal domain YIM_RS02290 PF16177 Acetyl-coenzyme A synthetase N-terminus YIM_RS02290 PF00501 AMP-binding enzyme YIM_RS02300 PF00156 Phosphoribosyl transferase domain YIM_RS02310 PF01380 SIS domain YIM_RS02315 PF01418 Helix-turn-helix domain, rpiR family YIM_RS02315 PF01380 SIS domain YIM_RS02320 PF00144 Beta-lactamase YIM_RS02325 PF07075 Protein of unknown function (DUF1343) YIM_RS02330 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS02330 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS02345 PF00437 Type II/IV secretion system protein YIM_RS02380 PF09369 Domain of unknown function (DUF1998) YIM_RS02380 PF00271 Helicase conserved C-terminal domain YIM_RS02380 PF00270 DEAD/DEAH box helicase YIM_RS02385 PF03030 Inorganic H+ pyrophosphatase YIM_RS02410 PF01751 Toprim domain YIM_RS02410 PF13368 Topoisomerase C-terminal repeat YIM_RS02410 PF01131 DNA topoisomerase YIM_RS02420 PF02223 Thymidylate kinase YIM_RS02425 PF12169 DNA polymerase III subunits gamma and tau domain III YIM_RS02440 PF00589 Phage integrase family YIM_RS02450 PF12307 Protein of unknown function (DUF3631) YIM_RS02460 PF17854 FtsK alpha domain YIM_RS02460 PF09397 Ftsk gamma domain YIM_RS02460 PF01580 FtsK/SpoIIIE family YIM_RS02495 PF01230 HIT domain YIM_RS02510 PF00155 Aminotransferase class I and II YIM_RS02510 PF00392 Bacterial regulatory proteins, gntR family YIM_RS02515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS02520 PF00246 Zinc carboxypeptidase YIM_RS02525 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS02530 PF00298 Ribosomal protein L11, RNA binding domain YIM_RS02530 PF03946 Ribosomal protein L11, N-terminal domain YIM_RS02540 PF00464 Serine hydroxymethyltransferase YIM_RS02550 PF01022 Bacterial regulatory protein, arsR family YIM_RS02560 PF07690 Major Facilitator Superfamily YIM_RS02565 PF00719 Inorganic pyrophosphatase YIM_RS02570 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YIM_RS02580 PF01171 PP-loop family YIM_RS02580 PF09179 TilS substrate binding domain YIM_RS02585 PF00156 Phosphoribosyl transferase domain YIM_RS02610 PF01434 Peptidase family M41 YIM_RS02610 PF17862 AAA+ lid domain YIM_RS02610 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS02615 PF01227 GTP cyclohydrolase I YIM_RS02620 PF00809 Pterin binding enzyme YIM_RS02625 PF02152 Dihydroneopterin aldolase YIM_RS02630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YIM_RS02635 PF13411 MerR HTH family regulatory protein YIM_RS02660 PF02569 Pantoate-beta-alanine ligase YIM_RS02665 PF02261 Aspartate decarboxylase YIM_RS02670 PF01336 OB-fold nucleic acid binding domain YIM_RS02670 PF00152 tRNA synthetases class II (D, K and N) YIM_RS02675 PF11774 Lsr2 YIM_RS02690 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_RS02690 PF02861 Clp amino terminal domain, pathogenicity island component YIM_RS02690 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS02690 PF07724 AAA domain (Cdc48 subfamily) YIM_RS02690 PF17871 AAA lid domain YIM_RS02695 PF00196 Bacterial regulatory proteins, luxR family YIM_RS02700 PF01061 ABC-2 type transporter YIM_RS02705 PF13732 Domain of unknown function (DUF4162) YIM_RS02705 PF00005 ABC transporter YIM_RS02720 PF03992 Antibiotic biosynthesis monooxygenase YIM_RS02725 PF11838 ERAP1-like C-terminal domain YIM_RS02725 PF01433 Peptidase family M1 domain YIM_RS02730 PF00561 alpha/beta hydrolase fold YIM_RS02740 PF00633 Helix-hairpin-helix motif YIM_RS02740 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_RS02740 PF10576 Iron-sulfur binding domain of endonuclease III YIM_RS02750 PF00356 Bacterial regulatory proteins, lacI family YIM_RS02760 PF00005 ABC transporter YIM_RS02775 PF04286 Protein of unknown function (DUF445) YIM_RS02810 PF03062 MBOAT, membrane-bound O-acyltransferase family YIM_RS02815 PF00588 SpoU rRNA Methylase family YIM_RS02815 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_RS02820 PF09190 DALR domain YIM_RS02820 PF01406 tRNA synthetases class I (C) catalytic domain YIM_RS02830 PF02542 YgbB family YIM_RS02835 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YIM_RS02840 PF02559 CarD-like/TRCF domain YIM_RS02850 PF18073 Rubredoxin metal binding domain YIM_RS02850 PF06745 KaiC YIM_RS02885 PF00982 Glycosyltransferase family 20 YIM_RS02895 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_RS02910 PF00797 N-acetyltransferase YIM_RS02915 PF02567 Phenazine biosynthesis-like protein YIM_RS02920 PF03466 LysR substrate binding domain YIM_RS02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS02925 PF03551 Transcriptional regulator PadR-like family YIM_RS02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS02930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_RS02945 PF12833 Helix-turn-helix domain YIM_RS02945 PF02311 AraC-like ligand binding domain YIM_RS02950 PF00072 Response regulator receiver domain YIM_RS02950 PF00196 Bacterial regulatory proteins, luxR family YIM_RS02970 PF04542 Sigma-70 region 2 YIM_RS02970 PF08281 Sigma-70, region 4 YIM_RS02980 PF13380 CoA binding domain YIM_RS02995 PF00999 Sodium/hydrogen exchanger family YIM_RS03000 PF00440 Bacterial regulatory proteins, tetR family YIM_RS03000 PF18665 Tetracyclin repressor-like, C-terminal domain YIM_RS03005 PF00501 AMP-binding enzyme YIM_RS03005 PF14535 AMP-binding enzyme C-terminal domain YIM_RS03015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS03015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS03020 PF00067 Cytochrome P450 YIM_RS03025 PF00171 Aldehyde dehydrogenase family YIM_RS03025 PF01575 MaoC like domain YIM_RS03030 PF05138 Phenylacetic acid catabolic protein YIM_RS03035 PF06243 Phenylacetic acid degradation B YIM_RS03040 PF05138 Phenylacetic acid catabolic protein YIM_RS03045 PF01883 Iron-sulfur cluster assembly protein YIM_RS03050 PF00175 Oxidoreductase NAD-binding domain YIM_RS03050 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS03050 PF00970 Oxidoreductase FAD-binding domain YIM_RS03055 PF07690 Major Facilitator Superfamily YIM_RS03065 PF00480 ROK family YIM_RS03070 PF01116 Fructose-bisphosphate aldolase class-II YIM_RS03075 PF00920 Dehydratase family YIM_RS03090 PF00005 ABC transporter YIM_RS03090 PF13732 Domain of unknown function (DUF4162) YIM_RS03095 PF01061 ABC-2 type transporter YIM_RS03110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS03115 PF01738 Dienelactone hydrolase family YIM_RS03125 PF04286 Protein of unknown function (DUF445) YIM_RS03135 PF00583 Acetyltransferase (GNAT) family YIM_RS03140 PF00202 Aminotransferase class-III YIM_RS03145 PF06339 Ectoine synthase YIM_RS03150 PF05721 Phytanoyl-CoA dioxygenase (PhyH) YIM_RS03155 PF00486 Transcriptional regulatory protein, C terminal YIM_RS03155 PF03704 Bacterial transcriptional activator domain YIM_RS03155 PF00931 NB-ARC domain YIM_RS03175 PF00691 OmpA family YIM_RS03175 PF00223 Photosystem I psaA/psaB protein YIM_RS03195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YIM_RS03205 PF01869 BadF/BadG/BcrA/BcrD ATPase family YIM_RS03210 PF01380 SIS domain YIM_RS03215 PF07702 UTRA domain YIM_RS03215 PF00392 Bacterial regulatory proteins, gntR family YIM_RS03220 PF07690 Major Facilitator Superfamily YIM_RS03225 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS03235 PF01230 HIT domain YIM_RS03240 PF00586 AIR synthase related protein, N-terminal domain YIM_RS03240 PF02769 AIR synthase related protein, C-terminal domain YIM_RS03260 PF02224 Cytidylate kinase YIM_RS03265 PF02581 Thiamine monophosphate synthase YIM_RS03270 PF01266 FAD dependent oxidoreductase YIM_RS03270 PF05690 Thiazole biosynthesis protein ThiG YIM_RS03275 PF05690 Thiazole biosynthesis protein ThiG YIM_RS03275 PF02597 ThiS family YIM_RS03280 PF05690 Thiazole biosynthesis protein ThiG YIM_RS03295 PF08543 Phosphomethylpyrimidine kinase YIM_RS03310 PF08543 Phosphomethylpyrimidine kinase YIM_RS03315 PF13667 ThiC-associated domain YIM_RS03315 PF01964 Radical SAM ThiC family YIM_RS03325 PF00723 Glycosyl hydrolases family 15 YIM_RS03325 PF09137 Glucodextranase, domain N YIM_RS03330 PF01327 Polypeptide deformylase YIM_RS03350 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS03350 PF17862 AAA+ lid domain YIM_RS03350 PF01434 Peptidase family M41 YIM_RS03355 PF01066 CDP-alcohol phosphatidyltransferase YIM_RS03360 PF02666 Phosphatidylserine decarboxylase YIM_RS03365 PF03454 MoeA C-terminal region (domain IV) YIM_RS03365 PF03453 MoeA N-terminal region (domain I and II) YIM_RS03365 PF00994 Probable molybdopterin binding domain YIM_RS03380 PF00313 'Cold-shock' DNA-binding domain YIM_RS03385 PF00069 Protein kinase domain YIM_RS03385 PF13462 Thioredoxin YIM_RS03390 PF00118 TCP-1/cpn60 chaperonin family YIM_RS03400 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS03405 PF13378 Enolase C-terminal domain-like YIM_RS03405 PF18374 Enolase N-terminal domain-like YIM_RS03410 PF03704 Bacterial transcriptional activator domain YIM_RS03410 PF00931 NB-ARC domain YIM_RS03410 PF00486 Transcriptional regulatory protein, C terminal YIM_RS03420 PF01614 Bacterial transcriptional regulator YIM_RS03420 PF09339 IclR helix-turn-helix domain YIM_RS03430 PF00271 Helicase conserved C-terminal domain YIM_RS03430 PF04851 Type III restriction enzyme, res subunit YIM_RS03450 PF03932 CutC family YIM_RS03455 PF07690 Major Facilitator Superfamily YIM_RS03460 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS03480 PF03259 Roadblock/LC7 domain YIM_RS03495 PF03259 Roadblock/LC7 domain YIM_RS03515 PF03949 Malic enzyme, NAD binding domain YIM_RS03515 PF00390 Malic enzyme, N-terminal domain YIM_RS03520 PF01967 MoaC family YIM_RS03525 PF02391 MoaE protein YIM_RS03530 PF06737 Transglycosylase-like domain YIM_RS03545 PF04055 Radical SAM superfamily YIM_RS03545 PF06463 Molybdenum Cofactor Synthesis C YIM_RS03550 PF00145 C-5 cytosine-specific DNA methylase YIM_RS03550 PF13411 MerR HTH family regulatory protein YIM_RS03555 PF13344 Haloacid dehalogenase-like hydrolase YIM_RS03565 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_RS03580 PF03733 Inner membrane component domain YIM_RS03585 PF02567 Phenazine biosynthesis-like protein YIM_RS03590 PF13193 AMP-binding enzyme C-terminal domain YIM_RS03590 PF00501 AMP-binding enzyme YIM_RS03595 PF00268 Ribonucleotide reductase, small chain YIM_RS03605 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS03615 PF00313 'Cold-shock' DNA-binding domain YIM_RS03625 PF07690 Major Facilitator Superfamily YIM_RS03635 PF11228 Protein of unknown function (DUF3027) YIM_RS03650 PF01494 FAD binding domain YIM_RS03665 PF00860 Permease family YIM_RS03670 PF01047 MarR family YIM_RS03675 PF05977 Transmembrane secretion effector YIM_RS03685 PF00797 N-acetyltransferase YIM_RS03690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YIM_RS03690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YIM_RS03695 PF01126 Heme oxygenase YIM_RS03710 PF00588 SpoU rRNA Methylase family YIM_RS03730 PF11268 Protein of unknown function (DUF3071) YIM_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS03735 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS03735 PF00672 HAMP domain YIM_RS03740 PF00486 Transcriptional regulatory protein, C terminal YIM_RS03740 PF00072 Response regulator receiver domain YIM_RS03755 PF00005 ABC transporter YIM_RS03755 PF12704 MacB-like periplasmic core domain YIM_RS03755 PF02687 FtsX-like permease family YIM_RS03760 PF02687 FtsX-like permease family YIM_RS03760 PF00005 ABC transporter YIM_RS03760 PF12704 MacB-like periplasmic core domain YIM_RS03765 PF09594 Glycosyltransferase family 87 YIM_RS03770 PF00144 Beta-lactamase YIM_RS03775 PF00266 Aminotransferase class-V YIM_RS03780 PF00196 Bacterial regulatory proteins, luxR family YIM_RS03780 PF00072 Response regulator receiver domain YIM_RS03785 PF17200 Single Cache domain 2 YIM_RS03785 PF07730 Histidine kinase YIM_RS03795 PF13732 Domain of unknown function (DUF4162) YIM_RS03795 PF00005 ABC transporter YIM_RS03810 PF00106 short chain dehydrogenase YIM_RS03810 PF00561 alpha/beta hydrolase fold YIM_RS03815 PF00440 Bacterial regulatory proteins, tetR family YIM_RS03820 PF00285 Citrate synthase, C-terminal domain YIM_RS03825 PF00547 Urease, gamma subunit YIM_RS03830 PF00699 Urease beta subunit YIM_RS03835 PF01979 Amidohydrolase family YIM_RS03835 PF00449 Urease alpha-subunit, N-terminal domain YIM_RS03840 PF01730 UreF YIM_RS03845 PF02492 CobW/HypB/UreG, nucleotide-binding domain YIM_RS03850 PF01774 UreD urease accessory protein YIM_RS03860 PF03583 Secretory lipase YIM_RS03870 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_RS03870 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YIM_RS03885 PF00753 Metallo-beta-lactamase superfamily YIM_RS03890 PF01263 Aldose 1-epimerase YIM_RS03895 PF01979 Amidohydrolase family YIM_RS03900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS03900 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS03900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS03910 PF00294 pfkB family carbohydrate kinase YIM_RS03915 PF00285 Citrate synthase, C-terminal domain YIM_RS03920 PF03441 FAD binding domain of DNA photolyase YIM_RS03920 PF00875 DNA photolyase YIM_RS03930 PF13732 Domain of unknown function (DUF4162) YIM_RS03930 PF00005 ABC transporter YIM_RS03945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YIM_RS03945 PF01266 FAD dependent oxidoreductase YIM_RS03950 PF00440 Bacterial regulatory proteins, tetR family YIM_RS03955 PF01565 FAD binding domain YIM_RS03955 PF02913 FAD linked oxidases, C-terminal domain YIM_RS03970 PF00107 Zinc-binding dehydrogenase YIM_RS03970 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS03990 PF13193 AMP-binding enzyme C-terminal domain YIM_RS03990 PF00501 AMP-binding enzyme YIM_RS04000 PF00425 chorismate binding enzyme YIM_RS04025 PF00375 Sodium:dicarboxylate symporter family YIM_RS04030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS04030 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS04030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS04035 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS04035 PF00107 Zinc-binding dehydrogenase YIM_RS04050 PF13193 AMP-binding enzyme C-terminal domain YIM_RS04050 PF00501 AMP-binding enzyme YIM_RS04055 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS04070 PF02742 Iron dependent repressor, metal binding and dimerisation domain YIM_RS04070 PF18357 Diphteria toxin repressor SH3 domain YIM_RS04070 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_RS04080 PF00324 Amino acid permease YIM_RS04085 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS04085 PF00107 Zinc-binding dehydrogenase YIM_RS04090 PF00005 ABC transporter YIM_RS04105 PF03176 MMPL family YIM_RS04115 PF00072 Response regulator receiver domain YIM_RS04115 PF00486 Transcriptional regulatory protein, C terminal YIM_RS04125 PF00106 short chain dehydrogenase YIM_RS04130 PF00561 alpha/beta hydrolase fold YIM_RS04135 PF00155 Aminotransferase class I and II YIM_RS04135 PF00392 Bacterial regulatory proteins, gntR family YIM_RS04150 PF00440 Bacterial regulatory proteins, tetR family YIM_RS04150 PF16925 Tetracyclin repressor-like, C-terminal domain YIM_RS04155 PF00857 Isochorismatase family YIM_RS04160 PF01965 DJ-1/PfpI family YIM_RS04170 PF00381 PTS HPr component phosphorylation site YIM_RS04180 PF00561 alpha/beta hydrolase fold YIM_RS04190 PF14765 Polyketide synthase dehydratase YIM_RS04190 PF00550 Phosphopantetheine attachment site YIM_RS04190 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS04190 PF00698 Acyl transferase domain YIM_RS04190 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS04190 PF08990 Erythronolide synthase docking YIM_RS04190 PF09277 Erythronolide synthase, docking YIM_RS04190 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS04190 PF08659 KR domain YIM_RS04190 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS04195 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS04195 PF00107 Zinc-binding dehydrogenase YIM_RS04200 PF06441 Epoxide hydrolase N terminus YIM_RS04215 PF00672 HAMP domain YIM_RS04215 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS04220 PF00486 Transcriptional regulatory protein, C terminal YIM_RS04220 PF00072 Response regulator receiver domain YIM_RS04235 PF00005 ABC transporter YIM_RS04240 PF00005 ABC transporter YIM_RS04240 PF12704 MacB-like periplasmic core domain YIM_RS04240 PF02687 FtsX-like permease family YIM_RS04280 PF06441 Epoxide hydrolase N terminus YIM_RS04285 PF00561 alpha/beta hydrolase fold YIM_RS04330 PF00072 Response regulator receiver domain YIM_RS04330 PF00196 Bacterial regulatory proteins, luxR family YIM_RS04335 PF03458 UPF0126 domain YIM_RS04340 PF00072 Response regulator receiver domain YIM_RS04340 PF00486 Transcriptional regulatory protein, C terminal YIM_RS04345 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS04345 PF00672 HAMP domain YIM_RS04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS04350 PF00455 DeoR C terminal sensor domain YIM_RS04350 PF08220 DeoR-like helix-turn-helix domain YIM_RS04355 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YIM_RS04355 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YIM_RS04360 PF13180 PDZ domain YIM_RS04385 PF00535 Glycosyl transferase family 2 YIM_RS04395 PF00486 Transcriptional regulatory protein, C terminal YIM_RS04395 PF00072 Response regulator receiver domain YIM_RS04400 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS04400 PF00989 PAS fold YIM_RS04400 PF16736 Single Cache-like YIM_RS04405 PF01370 NAD dependent epimerase/dehydratase family YIM_RS04410 PF00994 Probable molybdopterin binding domain YIM_RS04410 PF01967 MoaC family YIM_RS04415 PF01741 Large-conductance mechanosensitive channel, MscL YIM_RS04430 PF01812 5-formyltetrahydrofolate cyclo-ligase family YIM_RS04435 PF00483 Nucleotidyl transferase YIM_RS04440 PF03453 MoeA N-terminal region (domain I and II) YIM_RS04440 PF03454 MoeA C-terminal region (domain IV) YIM_RS04440 PF00994 Probable molybdopterin binding domain YIM_RS04465 PF00005 ABC transporter YIM_RS04465 PF17755 UvrA DNA-binding domain YIM_RS04465 PF17760 UvrA interaction domain YIM_RS04490 PF13460 NAD(P)H-binding YIM_RS04495 PF00440 Bacterial regulatory proteins, tetR family YIM_RS04505 PF07730 Histidine kinase YIM_RS04510 PF00072 Response regulator receiver domain YIM_RS04510 PF00196 Bacterial regulatory proteins, luxR family YIM_RS04515 PF03176 MMPL family YIM_RS04540 PF00171 Aldehyde dehydrogenase family YIM_RS04550 PF03475 3-alpha domain YIM_RS04550 PF03473 MOSC domain YIM_RS04560 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_RS04560 PF00728 Glycosyl hydrolase family 20, catalytic domain YIM_RS04565 PF16177 Acetyl-coenzyme A synthetase N-terminus YIM_RS04565 PF00501 AMP-binding enzyme YIM_RS04565 PF13193 AMP-binding enzyme C-terminal domain YIM_RS04570 PF03793 PASTA domain YIM_RS04570 PF00069 Protein kinase domain YIM_RS04575 PF00041 Fibronectin type III domain YIM_RS04575 PF02018 Carbohydrate binding domain YIM_RS04575 PF00704 Glycosyl hydrolases family 18 YIM_RS04580 PF05368 NmrA-like family YIM_RS04585 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase YIM_RS04585 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase YIM_RS04590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS04600 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS04600 PF00107 Zinc-binding dehydrogenase YIM_RS04605 PF00425 chorismate binding enzyme YIM_RS04605 PF04715 Anthranilate synthase component I, N terminal region YIM_RS04625 PF00005 ABC transporter YIM_RS04635 PF08264 Anticodon-binding domain of tRNA YIM_RS04635 PF09334 tRNA synthetases class I (M) YIM_RS04640 PF01026 TatD related DNase YIM_RS04645 PF06737 Transglycosylase-like domain YIM_RS04645 PF03990 G5-linked-Ubiquitin-like domain YIM_RS04645 PF07501 G5 domain YIM_RS04650 PF00398 Ribosomal RNA adenine dimethylase YIM_RS04655 PF00005 ABC transporter YIM_RS04655 PF09383 NIL domain YIM_RS04660 PF00288 GHMP kinases N terminal domain YIM_RS04660 PF08544 GHMP kinases C terminal YIM_RS04665 PF16326 ABC transporter C-terminal domain YIM_RS04665 PF00005 ABC transporter YIM_RS04665 PF12848 ABC transporter YIM_RS04670 PF00501 AMP-binding enzyme YIM_RS04670 PF14535 AMP-binding enzyme C-terminal domain YIM_RS04685 PF01195 Peptidyl-tRNA hydrolase YIM_RS04690 PF14693 Ribosomal protein TL5, C-terminal domain YIM_RS04690 PF01386 Ribosomal L25p family YIM_RS04700 PF00296 Luciferase-like monooxygenase YIM_RS04705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YIM_RS04705 PF14572 Phosphoribosyl synthetase-associated domain YIM_RS04710 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS04710 PF12804 MobA-like NTP transferase domain YIM_RS04715 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS04730 PF00440 Bacterial regulatory proteins, tetR family YIM_RS04745 PF07995 Glucose / Sorbosone dehydrogenase YIM_RS04750 PF17757 UvrB interaction domain YIM_RS04750 PF03461 TRCF domain YIM_RS04750 PF00271 Helicase conserved C-terminal domain YIM_RS04750 PF02559 CarD-like/TRCF domain YIM_RS04750 PF00270 DEAD/DEAH box helicase YIM_RS04760 PF03819 MazG nucleotide pyrophosphohydrolase domain YIM_RS04780 PF13192 Thioredoxin domain YIM_RS04780 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS04800 PF03952 Enolase, N-terminal domain YIM_RS04800 PF00113 Enolase, C-terminal TIM barrel domain YIM_RS04825 PF02541 Ppx/GppA phosphatase family YIM_RS04830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS04840 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS04845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS04845 PF00005 ABC transporter YIM_RS04850 PF00005 ABC transporter YIM_RS04850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS04855 PF00082 Subtilase family YIM_RS04870 PF03167 Uracil DNA glycosylase superfamily YIM_RS04890 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS04905 PF00196 Bacterial regulatory proteins, luxR family YIM_RS04905 PF00072 Response regulator receiver domain YIM_RS04910 PF07730 Histidine kinase YIM_RS04915 PF05423 Mycobacterium membrane protein YIM_RS04920 PF01638 HxlR-like helix-turn-helix YIM_RS04925 PF07690 Major Facilitator Superfamily YIM_RS04935 PF13286 Phosphohydrolase-associated domain YIM_RS04935 PF01966 HD domain YIM_RS04940 PF01177 Asp/Glu/Hydantoin racemase YIM_RS04945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YIM_RS04950 PF00392 Bacterial regulatory proteins, gntR family YIM_RS04950 PF07729 FCD domain YIM_RS04960 PF13411 MerR HTH family regulatory protein YIM_RS04965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_RS04975 PF00106 short chain dehydrogenase YIM_RS04985 PF04143 Sulphur transport YIM_RS04990 PF02803 Thiolase, C-terminal domain YIM_RS04990 PF00108 Thiolase, N-terminal domain YIM_RS04995 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS04995 PF00571 CBS domain YIM_RS05020 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_RS05030 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS05030 PF13291 ACT domain YIM_RS05035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS05040 PF01037 Lrp/AsnC ligand binding domain YIM_RS05040 PF13404 AsnC-type helix-turn-helix domain YIM_RS05050 PF03449 Transcription elongation factor, N-terminal YIM_RS05050 PF01272 Transcription elongation factor, GreA/GreB, C-term YIM_RS05060 PF02585 GlcNAc-PI de-N-acetylase YIM_RS05070 PF00149 Calcineurin-like phosphoesterase YIM_RS05080 PF03190 Protein of unknown function, DUF255 YIM_RS05100 PF13411 MerR HTH family regulatory protein YIM_RS05110 PF03006 Haemolysin-III related YIM_RS05115 PF01255 Putative undecaprenyl diphosphate synthase YIM_RS05125 PF02562 PhoH-like protein YIM_RS05125 PF13638 PIN domain YIM_RS05130 PF00478 IMP dehydrogenase / GMP reductase domain YIM_RS05130 PF00571 CBS domain YIM_RS05175 PF01068 ATP dependent DNA ligase domain YIM_RS05175 PF04675 DNA ligase N terminus YIM_RS05175 PF04679 ATP dependent DNA ligase C terminal region YIM_RS05180 PF12849 PBP superfamily domain YIM_RS05185 PF00392 Bacterial regulatory proteins, gntR family YIM_RS05195 PF00248 Aldo/keto reductase family YIM_RS05210 PF00440 Bacterial regulatory proteins, tetR family YIM_RS05210 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS05215 PF00206 Lyase YIM_RS05215 PF10415 Fumarase C C-terminus YIM_RS05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS05225 PF00089 Trypsin YIM_RS05230 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YIM_RS05235 PF02609 Exonuclease VII small subunit YIM_RS05245 PF02601 Exonuclease VII, large subunit YIM_RS05245 PF13742 OB-fold nucleic acid binding domain YIM_RS05255 PF02401 LytB protein YIM_RS05260 PF00248 Aldo/keto reductase family YIM_RS05275 PF00149 Calcineurin-like phosphoesterase YIM_RS05275 PF12320 Type 5 capsule protein repressor C-terminal domain YIM_RS05280 PF13476 AAA domain YIM_RS05285 PF02805 Metal binding domain of Ada YIM_RS05285 PF06029 AlkA N-terminal domain YIM_RS05285 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_RS05285 PF12833 Helix-turn-helix domain YIM_RS05290 PF06071 Protein of unknown function (DUF933) YIM_RS05290 PF01926 50S ribosome-binding GTPase YIM_RS05305 PF01329 Pterin 4 alpha carbinolamine dehydratase YIM_RS05320 PF00005 ABC transporter YIM_RS05320 PF08402 TOBE domain YIM_RS05330 PF00005 ABC transporter YIM_RS05340 PF00486 Transcriptional regulatory protein, C terminal YIM_RS05340 PF00072 Response regulator receiver domain YIM_RS05345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS05345 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS05350 PF00293 NUDIX domain YIM_RS05355 PF00579 tRNA synthetases class I (W and Y) YIM_RS05365 PF00009 Elongation factor Tu GTP binding domain YIM_RS05365 PF00679 Elongation factor G C-terminus YIM_RS05365 PF14492 Elongation Factor G, domain II YIM_RS05365 PF03144 Elongation factor Tu domain 2 YIM_RS05370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS05390 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS05395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS05395 PF00005 ABC transporter YIM_RS05400 PF02585 GlcNAc-PI de-N-acetylase YIM_RS05420 PF02467 Transcription factor WhiB YIM_RS05425 PF00535 Glycosyl transferase family 2 YIM_RS05440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YIM_RS05440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YIM_RS05440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YIM_RS05440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YIM_RS05445 PF03966 Trm112p-like protein YIM_RS05455 PF01238 Phosphomannose isomerase type I YIM_RS05465 PF14310 Fibronectin type III-like domain YIM_RS05465 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS05465 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS05465 PF07691 PA14 domain YIM_RS05480 PF13520 Amino acid permease YIM_RS05490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YIM_RS05490 PF05221 S-adenosyl-L-homocysteine hydrolase YIM_RS05495 PF02223 Thymidylate kinase YIM_RS05500 PF01614 Bacterial transcriptional regulator YIM_RS05500 PF09339 IclR helix-turn-helix domain YIM_RS05505 PF00072 Response regulator receiver domain YIM_RS05505 PF00486 Transcriptional regulatory protein, C terminal YIM_RS05510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS05510 PF00672 HAMP domain YIM_RS05510 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS05515 PF10646 Sporulation and spore germination YIM_RS05515 PF10647 Lipoprotein LpqB beta-propeller domain YIM_RS05525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YIM_RS05525 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus YIM_RS05530 PF01043 SecA preprotein cross-linking domain YIM_RS05530 PF07516 SecA Wing and Scaffold domain YIM_RS05530 PF07517 SecA DEAD-like domain YIM_RS05540 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS05545 PF00588 SpoU rRNA Methylase family YIM_RS05545 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_RS05550 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_RS05560 PF00171 Aldehyde dehydrogenase family YIM_RS05570 PF03193 RsgA GTPase YIM_RS05575 PF02586 SOS response associated peptidase (SRAP) YIM_RS05585 PF04073 Aminoacyl-tRNA editing domain YIM_RS05590 PF08281 Sigma-70, region 4 YIM_RS05590 PF04542 Sigma-70 region 2 YIM_RS05595 PF13490 Putative zinc-finger YIM_RS05600 PF00364 Biotin-requiring enzyme YIM_RS05605 PF07568 Histidine kinase YIM_RS05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS05605 PF12282 Signal transduction histidine kinase YIM_RS05610 PF02467 Transcription factor WhiB YIM_RS05615 PF00781 Diacylglycerol kinase catalytic domain YIM_RS05630 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS05640 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_RS05645 PF03949 Malic enzyme, NAD binding domain YIM_RS05645 PF00390 Malic enzyme, N-terminal domain YIM_RS05655 PF00005 ABC transporter YIM_RS05655 PF00571 CBS domain YIM_RS05660 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS05665 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS05675 PF13508 Acetyltransferase (GNAT) domain YIM_RS05680 PF00082 Subtilase family YIM_RS05680 PF05922 Peptidase inhibitor I9 YIM_RS05685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_RS05685 PF00676 Dehydrogenase E1 component YIM_RS05685 PF02779 Transketolase, pyrimidine binding domain YIM_RS05685 PF16870 2-oxoglutarate dehydrogenase C-terminal YIM_RS05685 PF16078 2-oxoglutarate dehydrogenase N-terminus YIM_RS05700 PF05593 RHS Repeat YIM_RS05700 PF03527 RHS protein YIM_RS05725 PF00664 ABC transporter transmembrane region YIM_RS05725 PF00005 ABC transporter YIM_RS05735 PF00005 ABC transporter YIM_RS05740 PF07690 Major Facilitator Superfamily YIM_RS05745 PF00440 Bacterial regulatory proteins, tetR family YIM_RS05745 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS05750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YIM_RS05750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YIM_RS05755 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS05755 PF00107 Zinc-binding dehydrogenase YIM_RS05770 PF17853 GGDEF-like domain YIM_RS05770 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS05770 PF06018 CodY GAF-like domain YIM_RS05780 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_RS05785 PF00561 alpha/beta hydrolase fold YIM_RS05795 PF00440 Bacterial regulatory proteins, tetR family YIM_RS05800 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS05820 PF01039 Carboxyl transferase domain YIM_RS05825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS05825 PF00364 Biotin-requiring enzyme YIM_RS05825 PF02785 Biotin carboxylase C-terminal domain YIM_RS05825 PF00289 Biotin carboxylase, N-terminal domain YIM_RS05830 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS05830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS05830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS05840 PF00106 short chain dehydrogenase YIM_RS05855 PF02698 DUF218 domain YIM_RS05870 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS05870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS05870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS05880 PF00440 Bacterial regulatory proteins, tetR family YIM_RS05885 PF00108 Thiolase, N-terminal domain YIM_RS05885 PF02803 Thiolase, C-terminal domain YIM_RS05890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS05890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS05890 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS05895 PF12695 Alpha/beta hydrolase family YIM_RS05915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS05915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS05920 PF02913 FAD linked oxidases, C-terminal domain YIM_RS05920 PF01565 FAD binding domain YIM_RS05930 PF00202 Aminotransferase class-III YIM_RS05935 PF00171 Aldehyde dehydrogenase family YIM_RS05940 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_RS05945 PF00795 Carbon-nitrogen hydrolase YIM_RS05950 PF00392 Bacterial regulatory proteins, gntR family YIM_RS05950 PF07729 FCD domain YIM_RS05955 PF17645 Arylmalonate decarboxylase YIM_RS05965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS05970 PF01425 Amidase YIM_RS05985 PF12706 Beta-lactamase superfamily domain YIM_RS05990 PF04055 Radical SAM superfamily YIM_RS05990 PF13186 Iron-sulfur cluster-binding domain YIM_RS05995 PF05402 Coenzyme PQQ synthesis protein D (PqqD) YIM_RS06000 PF03070 TENA/THI-4/PQQC family YIM_RS06010 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_RS06010 PF06974 Protein of unknown function (DUF1298) YIM_RS06015 PF01266 FAD dependent oxidoreductase YIM_RS06020 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS06020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS06020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS06025 PF01968 Hydantoinase/oxoprolinase YIM_RS06025 PF05378 Hydantoinase/oxoprolinase N-terminal region YIM_RS06030 PF02538 Hydantoinase B/oxoprolinase YIM_RS06045 PF02423 Ornithine cyclodeaminase/mu-crystallin family YIM_RS06050 PF00171 Aldehyde dehydrogenase family YIM_RS06055 PF02515 CoA-transferase family III YIM_RS06080 PF07859 alpha/beta hydrolase fold YIM_RS06100 PF01022 Bacterial regulatory protein, arsR family YIM_RS06105 PF00561 alpha/beta hydrolase fold YIM_RS06110 PF13460 NAD(P)H-binding YIM_RS06120 PF08531 Alpha-L-rhamnosidase N-terminal domain YIM_RS06120 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain YIM_RS06120 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain YIM_RS06120 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain YIM_RS06125 PF00005 ABC transporter YIM_RS06130 PF02653 Branched-chain amino acid transport system / permease component YIM_RS06135 PF02653 Branched-chain amino acid transport system / permease component YIM_RS06140 PF13407 Periplasmic binding protein domain YIM_RS06145 PF01261 Xylose isomerase-like TIM barrel YIM_RS06160 PF13407 Periplasmic binding protein domain YIM_RS06165 PF00005 ABC transporter YIM_RS06170 PF02653 Branched-chain amino acid transport system / permease component YIM_RS06175 PF02653 Branched-chain amino acid transport system / permease component YIM_RS06180 PF01545 Cation efflux family YIM_RS06190 PF01810 LysE type translocator YIM_RS06195 PF03483 B3/4 domain YIM_RS06195 PF03484 tRNA synthetase B5 domain YIM_RS06195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YIM_RS06195 PF01588 Putative tRNA binding domain YIM_RS06195 PF03147 Ferredoxin-fold anticodon binding domain YIM_RS06205 PF04542 Sigma-70 region 2 YIM_RS06205 PF08281 Sigma-70, region 4 YIM_RS06210 PF00920 Dehydratase family YIM_RS06230 PF05746 DALR anticodon binding domain YIM_RS06230 PF00750 tRNA synthetases class I (R) YIM_RS06230 PF03485 Arginyl tRNA synthetase N terminal domain YIM_RS06235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_RS06235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_RS06240 PF00742 Homoserine dehydrogenase YIM_RS06240 PF03447 Homoserine dehydrogenase, NAD binding domain YIM_RS06240 PF01842 ACT domain YIM_RS06245 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS06250 PF00288 GHMP kinases N terminal domain YIM_RS06255 PF07498 Rho termination factor, N-terminal domain YIM_RS06255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_RS06255 PF07497 Rho termination factor, RNA-binding domain YIM_RS06265 PF01197 Ribosomal protein L31 YIM_RS06270 PF00472 RF-1 domain YIM_RS06270 PF03462 PCRF domain YIM_RS06280 PF00296 Luciferase-like monooxygenase YIM_RS06285 PF12697 Alpha/beta hydrolase family YIM_RS06290 PF09278 MerR, DNA binding YIM_RS06290 PF00376 MerR family regulatory protein YIM_RS06295 PF05175 Methyltransferase small domain YIM_RS06295 PF17827 PrmC N-terminal domain YIM_RS06300 PF01300 Telomere recombination YIM_RS06305 PF00953 Glycosyl transferase family 4 YIM_RS06330 PF00119 ATP synthase A chain YIM_RS06335 PF00137 ATP synthase subunit C YIM_RS06340 PF00430 ATP synthase B/B' CF(0) YIM_RS06345 PF00213 ATP synthase delta (OSCP) subunit YIM_RS06350 PF02874 ATP synthase alpha/beta family, beta-barrel domain YIM_RS06350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_RS06350 PF00306 ATP synthase alpha/beta chain, C terminal domain YIM_RS06355 PF00231 ATP synthase YIM_RS06360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_RS06360 PF02874 ATP synthase alpha/beta family, beta-barrel domain YIM_RS06365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YIM_RS06370 PF10739 Protein of unknown function (DUF2550) YIM_RS06380 PF01923 Cobalamin adenosyltransferase YIM_RS06385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YIM_RS06395 PF01810 LysE type translocator YIM_RS06400 PF02310 B12 binding domain YIM_RS06400 PF01642 Methylmalonyl-CoA mutase YIM_RS06405 PF01580 FtsK/SpoIIIE family YIM_RS06410 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS06425 PF01939 Endonuclease NucS YIM_RS06430 PF00474 Sodium:solute symporter family YIM_RS06445 PF02733 Dak1 domain YIM_RS06450 PF02734 DAK2 domain YIM_RS06455 PF00381 PTS HPr component phosphorylation site YIM_RS06455 PF00391 PEP-utilising enzyme, mobile domain YIM_RS06455 PF05524 PEP-utilising enzyme, N-terminal YIM_RS06455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YIM_RS06455 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_RS06465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS06465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS06480 PF00041 Fibronectin type III domain YIM_RS06480 PF00704 Glycosyl hydrolases family 18 YIM_RS06485 PF00398 Ribosomal RNA adenine dimethylase YIM_RS06490 PF12833 Helix-turn-helix domain YIM_RS06490 PF12852 Cupin YIM_RS06505 PF13302 Acetyltransferase (GNAT) domain YIM_RS06515 PF00795 Carbon-nitrogen hydrolase YIM_RS06515 PF02540 NAD synthase YIM_RS06520 PF01546 Peptidase family M20/M25/M40 YIM_RS06520 PF07687 Peptidase dimerisation domain YIM_RS06530 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS06530 PF13191 AAA ATPase domain YIM_RS06540 PF01043 SecA preprotein cross-linking domain YIM_RS06540 PF07516 SecA Wing and Scaffold domain YIM_RS06540 PF07517 SecA DEAD-like domain YIM_RS06545 PF00561 alpha/beta hydrolase fold YIM_RS06550 PF00561 alpha/beta hydrolase fold YIM_RS06560 PF01965 DJ-1/PfpI family YIM_RS06570 PF00120 Glutamine synthetase, catalytic domain YIM_RS06570 PF03951 Glutamine synthetase, beta-Grasp domain YIM_RS06595 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YIM_RS06595 PF00117 Glutamine amidotransferase class-I YIM_RS06600 PF01384 Phosphate transporter family YIM_RS06605 PF08335 GlnD PII-uridylyltransferase YIM_RS06605 PF03710 Glutamate-ammonia ligase adenylyltransferase YIM_RS06615 PF03951 Glutamine synthetase, beta-Grasp domain YIM_RS06615 PF00120 Glutamine synthetase, catalytic domain YIM_RS06625 PF13829 Domain of unknown function (DUF4191) YIM_RS06630 PF00570 HRDC domain YIM_RS06630 PF13361 UvrD-like helicase C-terminal domain YIM_RS06630 PF00580 UvrD/REP helicase N-terminal domain YIM_RS06640 PF02467 Transcription factor WhiB YIM_RS06665 PF03109 ABC1 family YIM_RS06685 PF05362 Lon protease (S16) C-terminal proteolytic domain YIM_RS06685 PF13180 PDZ domain YIM_RS06695 PF03699 Uncharacterised protein family (UPF0182) YIM_RS06705 PF08279 HTH domain YIM_RS06705 PF13280 WYL domain YIM_RS06725 PF03462 PCRF domain YIM_RS06725 PF00472 RF-1 domain YIM_RS06730 PF00005 ABC transporter YIM_RS06735 PF18075 FtsX extracellular domain YIM_RS06735 PF02687 FtsX-like permease family YIM_RS06740 PF01668 SmpB protein YIM_RS06760 PF01047 MarR family YIM_RS06770 PF00072 Response regulator receiver domain YIM_RS06770 PF00196 Bacterial regulatory proteins, luxR family YIM_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS06775 PF07730 Histidine kinase YIM_RS06810 PF00403 Heavy-metal-associated domain YIM_RS06825 PF02583 Metal-sensitive transcriptional repressor YIM_RS06830 PF00005 ABC transporter YIM_RS06850 PF00221 Aromatic amino acid lyase YIM_RS06855 PF17391 Urocanase N-terminal domain YIM_RS06855 PF01175 Urocanase Rossmann-like domain YIM_RS06855 PF17392 Urocanase C-terminal domain YIM_RS06860 PF07687 Peptidase dimerisation domain YIM_RS06860 PF01546 Peptidase family M20/M25/M40 YIM_RS06865 PF01979 Amidohydrolase family YIM_RS06870 PF01979 Amidohydrolase family YIM_RS06885 PF01738 Dienelactone hydrolase family YIM_RS06890 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_RS06895 PF07730 Histidine kinase YIM_RS06900 PF00196 Bacterial regulatory proteins, luxR family YIM_RS06900 PF00072 Response regulator receiver domain YIM_RS06905 PF01494 FAD binding domain YIM_RS06920 PF01569 PAP2 superfamily YIM_RS06925 PF00005 ABC transporter YIM_RS06935 PF08482 ATP-dependent helicase C-terminal YIM_RS06935 PF04408 Helicase associated domain (HA2) YIM_RS06935 PF00271 Helicase conserved C-terminal domain YIM_RS06935 PF00270 DEAD/DEAH box helicase YIM_RS06940 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS06955 PF00877 NlpC/P60 family YIM_RS06995 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YIM_RS07000 PF03704 Bacterial transcriptional activator domain YIM_RS07000 PF00486 Transcriptional regulatory protein, C terminal YIM_RS07000 PF00931 NB-ARC domain YIM_RS07050 PF00583 Acetyltransferase (GNAT) family YIM_RS07050 PF00795 Carbon-nitrogen hydrolase YIM_RS07055 PF00701 Dihydrodipicolinate synthetase family YIM_RS07085 PF08678 Rsbr N terminal YIM_RS07085 PF01740 STAS domain YIM_RS07090 PF01740 STAS domain YIM_RS07095 PF13581 Histidine kinase-like ATPase domain YIM_RS07230 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_RS07230 PF00440 Bacterial regulatory proteins, tetR family YIM_RS07240 PF00440 Bacterial regulatory proteins, tetR family YIM_RS07245 PF00561 alpha/beta hydrolase fold YIM_RS07330 PF00248 Aldo/keto reductase family YIM_RS07395 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS07465 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS07465 PF05230 MASE2 domain YIM_RS07510 PF00437 Type II/IV secretion system protein YIM_RS07570 PF07728 AAA domain (dynein-related subfamily) YIM_RS07570 PF08406 CbbQ/NirQ/NorQ C-terminal YIM_RS07665 PF00589 Phage integrase family YIM_RS07665 PF02899 Phage integrase, N-terminal SAM-like domain YIM_RS07695 PF01476 LysM domain YIM_RS07695 PF08239 Bacterial SH3 domain YIM_RS07695 PF00877 NlpC/P60 family YIM_RS07765 PF00145 C-5 cytosine-specific DNA methylase YIM_RS07790 PF11774 Lsr2 YIM_RS07855 PF00931 NB-ARC domain YIM_RS07855 PF00486 Transcriptional regulatory protein, C terminal YIM_RS07855 PF03704 Bacterial transcriptional activator domain YIM_RS07870 PF12697 Alpha/beta hydrolase family YIM_RS07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS07885 PF03466 LysR substrate binding domain YIM_RS07890 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_RS07900 PF03193 RsgA GTPase YIM_RS07905 PF08241 Methyltransferase domain YIM_RS07915 PF00067 Cytochrome P450 YIM_RS07940 PF00890 FAD binding domain YIM_RS07965 PF00156 Phosphoribosyl transferase domain YIM_RS07965 PF05139 Erythromycin esterase YIM_RS07995 PF03780 Asp23 family, cell envelope-related function YIM_RS08010 PF07690 Major Facilitator Superfamily YIM_RS08015 PF00455 DeoR C terminal sensor domain YIM_RS08015 PF08220 DeoR-like helix-turn-helix domain YIM_RS08025 PF13411 MerR HTH family regulatory protein YIM_RS08030 PF04951 D-aminopeptidase YIM_RS08045 PF01638 HxlR-like helix-turn-helix YIM_RS08050 PF13460 NAD(P)H-binding YIM_RS08055 PF04235 Protein of unknown function (DUF418) YIM_RS08060 PF07730 Histidine kinase YIM_RS08065 PF00072 Response regulator receiver domain YIM_RS08065 PF00196 Bacterial regulatory proteins, luxR family YIM_RS08085 PF04978 Protein of unknown function (DUF664) YIM_RS08090 PF07690 Major Facilitator Superfamily YIM_RS08115 PF00561 alpha/beta hydrolase fold YIM_RS08120 PF00067 Cytochrome P450 YIM_RS08125 PF13732 Domain of unknown function (DUF4162) YIM_RS08125 PF00005 ABC transporter YIM_RS08130 PF00196 Bacterial regulatory proteins, luxR family YIM_RS08135 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YIM_RS08150 PF12833 Helix-turn-helix domain YIM_RS08150 PF02311 AraC-like ligand binding domain YIM_RS08165 PF00440 Bacterial regulatory proteins, tetR family YIM_RS08165 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_RS08175 PF00709 Adenylosuccinate synthetase YIM_RS08185 PF03793 PASTA domain YIM_RS08185 PF00069 Protein kinase domain YIM_RS08195 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_RS08220 PF01209 ubiE/COQ5 methyltransferase family YIM_RS08240 PF13977 BetI-type transcriptional repressor, C-terminal YIM_RS08240 PF00440 Bacterial regulatory proteins, tetR family YIM_RS08245 PF03704 Bacterial transcriptional activator domain YIM_RS08245 PF00486 Transcriptional regulatory protein, C terminal YIM_RS08245 PF00931 NB-ARC domain YIM_RS08250 PF02447 GntP family permease YIM_RS08255 PF02515 CoA-transferase family III YIM_RS08260 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS08265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS08265 PF03466 LysR substrate binding domain YIM_RS08285 PF16295 Tetracyclin repressor-like, C-terminal domain YIM_RS08285 PF00440 Bacterial regulatory proteins, tetR family YIM_RS08295 PF01965 DJ-1/PfpI family YIM_RS08295 PF12833 Helix-turn-helix domain YIM_RS08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS08320 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS08320 PF00672 HAMP domain YIM_RS08325 PF00486 Transcriptional regulatory protein, C terminal YIM_RS08325 PF00072 Response regulator receiver domain YIM_RS08340 PF00005 ABC transporter YIM_RS08355 PF00152 tRNA synthetases class II (D, K and N) YIM_RS08355 PF01336 OB-fold nucleic acid binding domain YIM_RS08365 PF03559 NDP-hexose 2,3-dehydratase YIM_RS08375 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_RS08380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS08385 PF13649 Methyltransferase domain YIM_RS08390 PF06722 Protein of unknown function (DUF1205) YIM_RS08415 PF00440 Bacterial regulatory proteins, tetR family YIM_RS08415 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_RS08420 PF00743 Flavin-binding monooxygenase-like YIM_RS08430 PF03816 Cell envelope-related transcriptional attenuator domain YIM_RS08430 PF13399 LytR cell envelope-related transcriptional attenuator YIM_RS08440 PF00072 Response regulator receiver domain YIM_RS08440 PF00196 Bacterial regulatory proteins, luxR family YIM_RS08445 PF03704 Bacterial transcriptional activator domain YIM_RS08445 PF00931 NB-ARC domain YIM_RS08445 PF00486 Transcriptional regulatory protein, C terminal YIM_RS08450 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS08460 PF00106 short chain dehydrogenase YIM_RS08465 PF00501 AMP-binding enzyme YIM_RS08470 PF00440 Bacterial regulatory proteins, tetR family YIM_RS08475 PF00501 AMP-binding enzyme YIM_RS08480 PF00296 Luciferase-like monooxygenase YIM_RS08490 PF00005 ABC transporter YIM_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS08505 PF03259 Roadblock/LC7 domain YIM_RS08520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_RS08520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_RS08525 PF04545 Sigma-70, region 4 YIM_RS08525 PF04542 Sigma-70 region 2 YIM_RS08530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_RS08530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS08575 PF03259 Roadblock/LC7 domain YIM_RS08615 PF01699 Sodium/calcium exchanger protein YIM_RS08620 PF13193 AMP-binding enzyme C-terminal domain YIM_RS08620 PF00501 AMP-binding enzyme YIM_RS08625 PF01758 Sodium Bile acid symporter family YIM_RS08635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YIM_RS08640 PF01047 MarR family YIM_RS08645 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS08645 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS08645 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding YIM_RS08655 PF00005 ABC transporter YIM_RS08680 PF08281 Sigma-70, region 4 YIM_RS08680 PF04542 Sigma-70 region 2 YIM_RS08710 PF13520 Amino acid permease YIM_RS08720 PF00196 Bacterial regulatory proteins, luxR family YIM_RS08720 PF00072 Response regulator receiver domain YIM_RS08725 PF00931 NB-ARC domain YIM_RS08725 PF03704 Bacterial transcriptional activator domain YIM_RS08725 PF00486 Transcriptional regulatory protein, C terminal YIM_RS08740 PF04686 Streptomyces sporulation and cell division protein, SsgA YIM_RS08750 PF02585 GlcNAc-PI de-N-acetylase YIM_RS08755 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase YIM_RS08765 PF13291 ACT domain YIM_RS08765 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS08785 PF13439 Glycosyltransferase Family 4 YIM_RS08785 PF00534 Glycosyl transferases group 1 YIM_RS08795 PF00925 GTP cyclohydrolase II YIM_RS08800 PF00459 Inositol monophosphatase family YIM_RS08810 PF02633 Creatinine amidohydrolase YIM_RS08815 PF03704 Bacterial transcriptional activator domain YIM_RS08830 PF01047 MarR family YIM_RS08840 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS08840 PF00440 Bacterial regulatory proteins, tetR family YIM_RS08900 PF02698 DUF218 domain YIM_RS08910 PF01555 DNA methylase YIM_RS08930 PF03734 L,D-transpeptidase catalytic domain YIM_RS08930 PF17964 Bacterial Ig domain YIM_RS08940 PF00929 Exonuclease YIM_RS08945 PF05872 Bacterial protein of unknown function (DUF853) YIM_RS08960 PF13180 PDZ domain YIM_RS08970 PF05958 tRNA (Uracil-5-)-methyltransferase YIM_RS08970 PF01938 TRAM domain YIM_RS08975 PF00398 Ribosomal RNA adenine dimethylase YIM_RS08980 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain YIM_RS08980 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_RS08990 PF00171 Aldehyde dehydrogenase family YIM_RS09000 PF01966 HD domain YIM_RS09015 PF16701 Adenylate cyclase regulatory domain YIM_RS09015 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS09020 PF00582 Universal stress protein family YIM_RS09030 PF00107 Zinc-binding dehydrogenase YIM_RS09030 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS09050 PF02803 Thiolase, C-terminal domain YIM_RS09050 PF00108 Thiolase, N-terminal domain YIM_RS09070 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS09070 PF00440 Bacterial regulatory proteins, tetR family YIM_RS09075 PF00106 short chain dehydrogenase YIM_RS09080 PF00392 Bacterial regulatory proteins, gntR family YIM_RS09085 PF02627 Carboxymuconolactone decarboxylase family YIM_RS09100 PF02653 Branched-chain amino acid transport system / permease component YIM_RS09105 PF00005 ABC transporter YIM_RS09115 PF00356 Bacterial regulatory proteins, lacI family YIM_RS09120 PF12823 Domain of unknown function (DUF3817) YIM_RS09120 PF03176 MMPL family YIM_RS09125 PF01047 MarR family YIM_RS09130 PF01910 Thiamine-binding protein YIM_RS09135 PF00085 Thioredoxin YIM_RS09150 PF11897 Protein of unknown function (DUF3417) YIM_RS09150 PF00343 Carbohydrate phosphorylase YIM_RS09160 PF00491 Arginase family YIM_RS09175 PF00005 ABC transporter YIM_RS09180 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS09185 PF01209 ubiE/COQ5 methyltransferase family YIM_RS09190 PF18096 THUMP domain-like YIM_RS09195 PF00072 Response regulator receiver domain YIM_RS09195 PF00196 Bacterial regulatory proteins, luxR family YIM_RS09200 PF07730 Histidine kinase YIM_RS09215 PF00005 ABC transporter YIM_RS09215 PF13732 Domain of unknown function (DUF4162) YIM_RS09225 PF05908 Poly-gamma-glutamate hydrolase YIM_RS09235 PF13411 MerR HTH family regulatory protein YIM_RS09240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS09250 PF01565 FAD binding domain YIM_RS09250 PF08031 Berberine and berberine like YIM_RS09270 PF00561 alpha/beta hydrolase fold YIM_RS09275 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS09275 PF12464 Maltose acetyltransferase YIM_RS09280 PF03466 LysR substrate binding domain YIM_RS09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS09285 PF01022 Bacterial regulatory protein, arsR family YIM_RS09290 PF09278 MerR, DNA binding YIM_RS09290 PF00376 MerR family regulatory protein YIM_RS09295 PF07690 Major Facilitator Superfamily YIM_RS09300 PF00376 MerR family regulatory protein YIM_RS09300 PF09278 MerR, DNA binding YIM_RS09305 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS09305 PF00107 Zinc-binding dehydrogenase YIM_RS09340 PF01494 FAD binding domain YIM_RS09345 PF01494 FAD binding domain YIM_RS09375 PF00106 short chain dehydrogenase YIM_RS09385 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS09385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_RS09395 PF00877 NlpC/P60 family YIM_RS09395 PF01476 LysM domain YIM_RS09395 PF08239 Bacterial SH3 domain YIM_RS09400 PF01156 Inosine-uridine preferring nucleoside hydrolase YIM_RS09405 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS09415 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS09415 PF00585 C-terminal regulatory domain of Threonine dehydratase YIM_RS09420 PF01381 Helix-turn-helix YIM_RS09420 PF09856 Predicted transcriptional regulator (DUF2083) YIM_RS09420 PF06114 IrrE N-terminal-like domain YIM_RS09425 PF00463 Isocitrate lyase family YIM_RS09430 PF01274 Malate synthase YIM_RS09435 PF04389 Peptidase family M28 YIM_RS09435 PF01483 Proprotein convertase P-domain YIM_RS09440 PF00534 Glycosyl transferases group 1 YIM_RS09440 PF13439 Glycosyltransferase Family 4 YIM_RS09455 PF00072 Response regulator receiver domain YIM_RS09455 PF00196 Bacterial regulatory proteins, luxR family YIM_RS09460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS09460 PF13492 GAF domain YIM_RS09460 PF07730 Histidine kinase YIM_RS09460 PF13185 GAF domain YIM_RS09470 PF00891 O-methyltransferase domain YIM_RS09475 PF00255 Glutathione peroxidase YIM_RS09480 PF09210 Domain of unknown function (DUF1957) YIM_RS09480 PF03065 Glycosyl hydrolase family 57 YIM_RS09485 PF08241 Methyltransferase domain YIM_RS09495 PF02645 Uncharacterised protein, DegV family COG1307 YIM_RS09500 PF01012 Electron transfer flavoprotein domain YIM_RS09505 PF00766 Electron transfer flavoprotein FAD-binding domain YIM_RS09505 PF01012 Electron transfer flavoprotein domain YIM_RS09520 PF07690 Major Facilitator Superfamily YIM_RS09525 PF00266 Aminotransferase class-V YIM_RS09545 PF08450 SMP-30/Gluconolactonase/LRE-like region YIM_RS09550 PF00753 Metallo-beta-lactamase superfamily YIM_RS09560 PF02540 NAD synthase YIM_RS09560 PF00795 Carbon-nitrogen hydrolase YIM_RS09575 PF12826 Helix-hairpin-helix motif YIM_RS09575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YIM_RS09575 PF01653 NAD-dependent DNA ligase adenylation domain YIM_RS09575 PF00533 BRCA1 C Terminus (BRCT) domain YIM_RS09575 PF03120 NAD-dependent DNA ligase OB-fold domain YIM_RS09580 PF00296 Luciferase-like monooxygenase YIM_RS09590 PF02686 Glu-tRNAGln amidotransferase C subunit YIM_RS09595 PF01425 Amidase YIM_RS09605 PF02934 GatB/GatE catalytic domain YIM_RS09605 PF02637 GatB domain YIM_RS09625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS09635 PF00920 Dehydratase family YIM_RS09645 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS09645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS09645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS09650 PF10369 Small subunit of acetolactate synthase YIM_RS09655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YIM_RS09655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YIM_RS09685 PF00440 Bacterial regulatory proteins, tetR family YIM_RS09690 PF01842 ACT domain YIM_RS09690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS09690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS09695 PF02225 PA domain YIM_RS09695 PF00082 Subtilase family YIM_RS09695 PF05922 Peptidase inhibitor I9 YIM_RS09695 PF13860 FlgD Ig-like domain YIM_RS09700 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_RS09705 PF00682 HMGL-like YIM_RS09705 PF08502 LeuA allosteric (dimerisation) domain YIM_RS09710 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_RS09715 PF01494 FAD binding domain YIM_RS09720 PF00749 tRNA synthetases class I (E and Q), catalytic domain YIM_RS09725 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS09740 PF04055 Radical SAM superfamily YIM_RS09740 PF00919 Uncharacterized protein family UPF0004 YIM_RS09740 PF01938 TRAM domain YIM_RS09755 PF00440 Bacterial regulatory proteins, tetR family YIM_RS09765 PF00107 Zinc-binding dehydrogenase YIM_RS09765 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS09770 PF13439 Glycosyltransferase Family 4 YIM_RS09770 PF00534 Glycosyl transferases group 1 YIM_RS09775 PF00535 Glycosyl transferase family 2 YIM_RS09790 PF01022 Bacterial regulatory protein, arsR family YIM_RS09795 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS09820 PF00440 Bacterial regulatory proteins, tetR family YIM_RS09835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS09870 PF00326 Prolyl oligopeptidase family YIM_RS09870 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region YIM_RS09880 PF00005 ABC transporter YIM_RS09895 PF00561 alpha/beta hydrolase fold YIM_RS09910 PF00326 Prolyl oligopeptidase family YIM_RS09920 PF02627 Carboxymuconolactone decarboxylase family YIM_RS09925 PF08281 Sigma-70, region 4 YIM_RS09925 PF04542 Sigma-70 region 2 YIM_RS09935 PF00106 short chain dehydrogenase YIM_RS09945 PF07732 Multicopper oxidase YIM_RS09945 PF00394 Multicopper oxidase YIM_RS09945 PF07731 Multicopper oxidase YIM_RS09995 PF01475 Ferric uptake regulator family YIM_RS10000 PF00141 Peroxidase YIM_RS10020 PF07690 Major Facilitator Superfamily YIM_RS10060 PF00067 Cytochrome P450 YIM_RS10070 PF03176 MMPL family YIM_RS10075 PF00155 Aminotransferase class I and II YIM_RS10105 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS10105 PF07689 KaiB domain YIM_RS10110 PF00041 Fibronectin type III domain YIM_RS10110 PF00704 Glycosyl hydrolases family 18 YIM_RS10115 PF02803 Thiolase, C-terminal domain YIM_RS10115 PF00108 Thiolase, N-terminal domain YIM_RS10125 PF13452 N-terminal half of MaoC dehydratase YIM_RS10130 PF00106 short chain dehydrogenase YIM_RS10135 PF09339 IclR helix-turn-helix domain YIM_RS10135 PF01614 Bacterial transcriptional regulator YIM_RS10140 PF00330 Aconitase family (aconitate hydratase) YIM_RS10145 PF00694 Aconitase C-terminal domain YIM_RS10150 PF00216 Bacterial DNA-binding protein YIM_RS10155 PF00486 Transcriptional regulatory protein, C terminal YIM_RS10155 PF00931 NB-ARC domain YIM_RS10155 PF03704 Bacterial transcriptional activator domain YIM_RS10160 PF00293 NUDIX domain YIM_RS10160 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS10165 PF17941 Polyphosphate kinase C-terminal domain 1 YIM_RS10165 PF13090 Polyphosphate kinase C-terminal domain 2 YIM_RS10165 PF02503 Polyphosphate kinase middle domain YIM_RS10165 PF13089 Polyphosphate kinase N-terminal domain YIM_RS10170 PF12804 MobA-like NTP transferase domain YIM_RS10180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YIM_RS10180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YIM_RS10195 PF00392 Bacterial regulatory proteins, gntR family YIM_RS10200 PF01820 D-ala D-ala ligase N-terminus YIM_RS10200 PF07478 D-ala D-ala ligase C-terminus YIM_RS10220 PF00586 AIR synthase related protein, N-terminal domain YIM_RS10220 PF02769 AIR synthase related protein, C-terminal domain YIM_RS10230 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS10235 PF03167 Uracil DNA glycosylase superfamily YIM_RS10240 PF00830 Ribosomal L28 family YIM_RS10245 PF13684 Dihydroxyacetone kinase family YIM_RS10245 PF02734 DAK2 domain YIM_RS10250 PF00271 Helicase conserved C-terminal domain YIM_RS10250 PF17191 RecG wedge domain YIM_RS10250 PF00270 DEAD/DEAH box helicase YIM_RS10260 PF05139 Erythromycin esterase YIM_RS10265 PF02743 Cache domain YIM_RS10265 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS10285 PF07690 Major Facilitator Superfamily YIM_RS10290 PF07286 Protein of unknown function (DUF1445) YIM_RS10295 PF02682 Carboxyltransferase domain, subdomain C and D YIM_RS10300 PF02626 Carboxyltransferase domain, subdomain A and B YIM_RS10305 PF04542 Sigma-70 region 2 YIM_RS10305 PF08281 Sigma-70, region 4 YIM_RS10310 PF02656 Domain of unknown function (DUF202) YIM_RS10315 PF02656 Domain of unknown function (DUF202) YIM_RS10340 PF02595 Glycerate kinase family YIM_RS10345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS10345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS10350 PF01047 MarR family YIM_RS10355 PF01144 Coenzyme A transferase YIM_RS10360 PF01144 Coenzyme A transferase YIM_RS10365 PF02803 Thiolase, C-terminal domain YIM_RS10365 PF00108 Thiolase, N-terminal domain YIM_RS10370 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal YIM_RS10370 PF00775 Dioxygenase YIM_RS10380 PF00561 alpha/beta hydrolase fold YIM_RS10385 PF02627 Carboxymuconolactone decarboxylase family YIM_RS10390 PF01614 Bacterial transcriptional regulator YIM_RS10390 PF09339 IclR helix-turn-helix domain YIM_RS10395 PF12804 MobA-like NTP transferase domain YIM_RS10400 PF08220 DeoR-like helix-turn-helix domain YIM_RS10400 PF00455 DeoR C terminal sensor domain YIM_RS10405 PF00294 pfkB family carbohydrate kinase YIM_RS10410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YIM_RS10410 PF02378 Phosphotransferase system, EIIC YIM_RS10415 PF02378 Phosphotransferase system, EIIC YIM_RS10415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YIM_RS10415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YIM_RS10420 PF02378 Phosphotransferase system, EIIC YIM_RS10420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YIM_RS10420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YIM_RS10425 PF00107 Zinc-binding dehydrogenase YIM_RS10425 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS10430 PF00391 PEP-utilising enzyme, mobile domain YIM_RS10430 PF05524 PEP-utilising enzyme, N-terminal YIM_RS10430 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_RS10435 PF02190 ATP-dependent protease La (LON) substrate-binding domain YIM_RS10435 PF05362 Lon protease (S16) C-terminal proteolytic domain YIM_RS10435 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS10440 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YIM_RS10440 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YIM_RS10455 PF01799 [2Fe-2S] binding domain YIM_RS10455 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS10460 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS10460 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS10465 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS10465 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS10480 PF03795 YCII-related domain YIM_RS10485 PF09594 Glycosyltransferase family 87 YIM_RS10490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS10490 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS10490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS10495 PF04962 KduI/IolB family YIM_RS10505 PF00294 pfkB family carbohydrate kinase YIM_RS10510 PF00005 ABC transporter YIM_RS10515 PF02653 Branched-chain amino acid transport system / permease component YIM_RS10520 PF13407 Periplasmic binding protein domain YIM_RS10525 PF01261 Xylose isomerase-like TIM barrel YIM_RS10530 PF00356 Bacterial regulatory proteins, lacI family YIM_RS10535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS10535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS10550 PF13520 Amino acid permease YIM_RS10555 PF00120 Glutamine synthetase, catalytic domain YIM_RS10560 PF07722 Peptidase C26 YIM_RS10565 PF00171 Aldehyde dehydrogenase family YIM_RS10575 PF02347 Glycine cleavage system P-protein YIM_RS10580 PF01571 Aminomethyltransferase folate-binding domain YIM_RS10580 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_RS10585 PF01597 Glycine cleavage H-protein YIM_RS10590 PF00464 Serine hydroxymethyltransferase YIM_RS10595 PF04055 Radical SAM superfamily YIM_RS10595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YIM_RS10600 PF03313 Serine dehydratase alpha chain YIM_RS10600 PF03315 Serine dehydratase beta chain YIM_RS10605 PF00392 Bacterial regulatory proteins, gntR family YIM_RS10605 PF07729 FCD domain YIM_RS10610 PF00905 Penicillin binding protein transpeptidase domain YIM_RS10610 PF00912 Transglycosylase YIM_RS10615 PF01596 O-methyltransferase YIM_RS10620 PF00005 ABC transporter YIM_RS10625 PF00106 short chain dehydrogenase YIM_RS10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS10635 PF14759 Reductase C-terminal YIM_RS10640 PF00440 Bacterial regulatory proteins, tetR family YIM_RS10640 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS10645 PF13460 NAD(P)H-binding YIM_RS10650 PF07690 Major Facilitator Superfamily YIM_RS10660 PF00999 Sodium/hydrogen exchanger family YIM_RS10665 PF01070 FMN-dependent dehydrogenase YIM_RS10675 PF00271 Helicase conserved C-terminal domain YIM_RS10675 PF04408 Helicase associated domain (HA2) YIM_RS10675 PF11898 Domain of unknown function (DUF3418) YIM_RS10675 PF00270 DEAD/DEAH box helicase YIM_RS10675 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YIM_RS10700 PF13193 AMP-binding enzyme C-terminal domain YIM_RS10700 PF00501 AMP-binding enzyme YIM_RS10710 PF00082 Subtilase family YIM_RS10710 PF05922 Peptidase inhibitor I9 YIM_RS10715 PF00106 short chain dehydrogenase YIM_RS10740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS10740 PF13378 Enolase C-terminal domain-like YIM_RS10745 PF00356 Bacterial regulatory proteins, lacI family YIM_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS10760 PF00005 ABC transporter YIM_RS10765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS10765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS10790 PF04075 F420H(2)-dependent quinone reductase YIM_RS10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS10805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_RS10810 PF13378 Enolase C-terminal domain-like YIM_RS10810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS10830 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_RS10830 PF02861 Clp amino terminal domain, pathogenicity island component YIM_RS10830 PF17871 AAA lid domain YIM_RS10830 PF07724 AAA domain (Cdc48 subfamily) YIM_RS10830 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS10840 PF01979 Amidohydrolase family YIM_RS10855 PF07694 5TMR of 5TMR-LYT YIM_RS10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS10855 PF06580 Histidine kinase YIM_RS10860 PF00072 Response regulator receiver domain YIM_RS10860 PF04397 LytTr DNA-binding domain YIM_RS10870 PF00474 Sodium:solute symporter family YIM_RS10880 PF00474 Sodium:solute symporter family YIM_RS10885 PF00293 NUDIX domain YIM_RS10935 PF02405 Permease MlaE YIM_RS10980 PF00296 Luciferase-like monooxygenase YIM_RS10985 PF13538 UvrD-like helicase C-terminal domain YIM_RS10995 PF01467 Cytidylyltransferase-like YIM_RS11000 PF00545 ribonuclease YIM_RS11010 PF02620 Large ribosomal RNA subunit accumulation protein YceD YIM_RS11015 PF01783 Ribosomal L32p protein family YIM_RS11020 PF14622 Ribonuclease-III-like YIM_RS11020 PF00035 Double-stranded RNA binding motif YIM_RS11025 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_RS11025 PF06827 Zinc finger found in FPG and IleRS YIM_RS11025 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YIM_RS11045 PF00480 ROK family YIM_RS11050 PF00733 Asparagine synthase YIM_RS11050 PF13537 Glutamine amidotransferase domain YIM_RS11060 PF03814 Potassium-transporting ATPase A subunit YIM_RS11070 PF02669 K+-transporting ATPase, c chain YIM_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS11075 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS11075 PF02702 Osmosensitive K+ channel His kinase sensor domain YIM_RS11075 PF13493 Domain of unknown function (DUF4118) YIM_RS11075 PF00582 Universal stress protein family YIM_RS11080 PF00072 Response regulator receiver domain YIM_RS11080 PF00486 Transcriptional regulatory protein, C terminal YIM_RS11090 PF00708 Acylphosphatase YIM_RS11125 PF00474 Sodium:solute symporter family YIM_RS11130 PF03702 Anhydro-N-acetylmuramic acid kinase YIM_RS11135 PF02881 SRP54-type protein, helical bundle domain YIM_RS11135 PF00448 SRP54-type protein, GTPase domain YIM_RS11140 PF13302 Acetyltransferase (GNAT) domain YIM_RS11145 PF09339 IclR helix-turn-helix domain YIM_RS11145 PF01614 Bacterial transcriptional regulator YIM_RS11150 PF01274 Malate synthase YIM_RS11160 PF00375 Sodium:dicarboxylate symporter family YIM_RS11165 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS11165 PF05651 Putative sugar diacid recognition YIM_RS11165 PF17853 GGDEF-like domain YIM_RS11170 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS11170 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS11175 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS11175 PF01799 [2Fe-2S] binding domain YIM_RS11180 PF01979 Amidohydrolase family YIM_RS11185 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS11185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS11195 PF00440 Bacterial regulatory proteins, tetR family YIM_RS11200 PF00860 Permease family YIM_RS11205 PF01014 Uricase YIM_RS11210 PF00576 HIUase/Transthyretin family YIM_RS11230 PF01979 Amidohydrolase family YIM_RS11235 PF13380 CoA binding domain YIM_RS11240 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_RS11245 PF00248 Aldo/keto reductase family YIM_RS11265 PF00909 Ammonium Transporter Family YIM_RS11270 PF00543 Nitrogen regulatory protein P-II YIM_RS11275 PF08335 GlnD PII-uridylyltransferase YIM_RS11275 PF01966 HD domain YIM_RS11285 PF02735 Ku70/Ku80 beta-barrel domain YIM_RS11290 PF00448 SRP54-type protein, GTPase domain YIM_RS11290 PF02978 Signal peptide binding domain YIM_RS11290 PF02881 SRP54-type protein, helical bundle domain YIM_RS11295 PF01979 Amidohydrolase family YIM_RS11310 PF00886 Ribosomal protein S16 YIM_RS11320 PF05239 PRC-barrel domain YIM_RS11320 PF01782 RimM N-terminal domain YIM_RS11325 PF01746 tRNA (Guanine-1)-methyltransferase YIM_RS11330 PF01245 Ribosomal protein L19 YIM_RS11335 PF10502 Signal peptidase, peptidase S26 YIM_RS11340 PF01351 Ribonuclease HII YIM_RS11345 PF10611 Protein of unknown function (DUF2469) YIM_RS11350 PF02021 Uncharacterised protein family UPF0102 YIM_RS11360 PF13335 Magnesium chelatase, subunit ChlI C-terminal YIM_RS11360 PF01078 Magnesium chelatase, subunit ChlI YIM_RS11365 PF02481 DNA recombination-mediator protein A YIM_RS11365 PF17782 DprA winged helix domain YIM_RS11370 PF02899 Phage integrase, N-terminal SAM-like domain YIM_RS11370 PF00589 Phage integrase family YIM_RS11375 PF04539 Sigma-70 region 3 YIM_RS11375 PF04545 Sigma-70, region 4 YIM_RS11375 PF04542 Sigma-70 region 2 YIM_RS11380 PF01551 Peptidase family M23 YIM_RS11385 PF00318 Ribosomal protein S2 YIM_RS11390 PF00889 Elongation factor TS YIM_RS11395 PF00696 Amino acid kinase family YIM_RS11400 PF01765 Ribosome recycling factor YIM_RS11415 PF01209 ubiE/COQ5 methyltransferase family YIM_RS11420 PF03551 Transcriptional regulator PadR-like family YIM_RS11425 PF04055 Radical SAM superfamily YIM_RS11455 PF07690 Major Facilitator Superfamily YIM_RS11465 PF00106 short chain dehydrogenase YIM_RS11470 PF00501 AMP-binding enzyme YIM_RS11470 PF00668 Condensation domain YIM_RS11470 PF13193 AMP-binding enzyme C-terminal domain YIM_RS11470 PF00550 Phosphopantetheine attachment site YIM_RS11475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_RS11475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_RS11490 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS11490 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS11490 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11490 PF00698 Acyl transferase domain YIM_RS11490 PF08659 KR domain YIM_RS11490 PF14765 Polyketide synthase dehydratase YIM_RS11490 PF00550 Phosphopantetheine attachment site YIM_RS11490 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11495 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11495 PF08659 KR domain YIM_RS11495 PF00975 Thioesterase domain YIM_RS11495 PF00550 Phosphopantetheine attachment site YIM_RS11495 PF18369 Polyketide synthase dimerisation element domain YIM_RS11495 PF00698 Acyl transferase domain YIM_RS11495 PF08990 Erythronolide synthase docking YIM_RS11495 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS11495 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11510 PF00550 Phosphopantetheine attachment site YIM_RS11510 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11510 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11510 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS11510 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS11510 PF00698 Acyl transferase domain YIM_RS11510 PF14765 Polyketide synthase dehydratase YIM_RS11510 PF08659 KR domain YIM_RS11515 PF00067 Cytochrome P450 YIM_RS11525 PF01494 FAD binding domain YIM_RS11530 PF00698 Acyl transferase domain YIM_RS11530 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS11530 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS11530 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11530 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11530 PF08659 KR domain YIM_RS11530 PF00550 Phosphopantetheine attachment site YIM_RS11530 PF14765 Polyketide synthase dehydratase YIM_RS11535 PF08659 KR domain YIM_RS11535 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11535 PF00698 Acyl transferase domain YIM_RS11535 PF08990 Erythronolide synthase docking YIM_RS11535 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS11535 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11535 PF00550 Phosphopantetheine attachment site YIM_RS11540 PF14765 Polyketide synthase dehydratase YIM_RS11540 PF00550 Phosphopantetheine attachment site YIM_RS11540 PF08659 KR domain YIM_RS11540 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11540 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS11540 PF00698 Acyl transferase domain YIM_RS11540 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS11540 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11545 PF00561 alpha/beta hydrolase fold YIM_RS11550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS11565 PF00550 Phosphopantetheine attachment site YIM_RS11565 PF00668 Condensation domain YIM_RS11565 PF00975 Thioesterase domain YIM_RS11565 PF00501 AMP-binding enzyme YIM_RS11565 PF13193 AMP-binding enzyme C-terminal domain YIM_RS11570 PF03704 Bacterial transcriptional activator domain YIM_RS11575 PF06722 Protein of unknown function (DUF1205) YIM_RS11580 PF03559 NDP-hexose 2,3-dehydratase YIM_RS11585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS11590 PF00483 Nucleotidyl transferase YIM_RS11595 PF04075 F420H(2)-dependent quinone reductase YIM_RS11645 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YIM_RS11670 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YIM_RS11670 PF13288 DXP reductoisomerase C-terminal domain YIM_RS11670 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YIM_RS11675 PF02163 Peptidase family M50 YIM_RS11675 PF17820 PDZ domain YIM_RS11680 PF04551 GcpE protein YIM_RS11695 PF00583 Acetyltransferase (GNAT) family YIM_RS11705 PF00905 Penicillin binding protein transpeptidase domain YIM_RS11710 PF00557 Metallopeptidase family M24 YIM_RS11720 PF00083 Sugar (and other) transporter YIM_RS11730 PF00392 Bacterial regulatory proteins, gntR family YIM_RS11730 PF07729 FCD domain YIM_RS11735 PF07690 Major Facilitator Superfamily YIM_RS11740 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS11740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_RS11750 PF00089 Trypsin YIM_RS11755 PF13673 Acetyltransferase (GNAT) domain YIM_RS11760 PF00155 Aminotransferase class I and II YIM_RS11770 PF00270 DEAD/DEAH box helicase YIM_RS11770 PF00271 Helicase conserved C-terminal domain YIM_RS11785 PF01266 FAD dependent oxidoreductase YIM_RS11790 PF03883 Peroxide stress protein YaaA YIM_RS11795 PF13508 Acetyltransferase (GNAT) domain YIM_RS11795 PF00583 Acetyltransferase (GNAT) family YIM_RS11800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS11800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS11810 PF04073 Aminoacyl-tRNA editing domain YIM_RS11810 PF03129 Anticodon binding domain YIM_RS11810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_RS11830 PF01894 Uncharacterised protein family UPF0047 YIM_RS11835 PF00196 Bacterial regulatory proteins, luxR family YIM_RS11835 PF00072 Response regulator receiver domain YIM_RS11850 PF00487 Fatty acid desaturase YIM_RS11855 PF00970 Oxidoreductase FAD-binding domain YIM_RS11855 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS11855 PF00175 Oxidoreductase NAD-binding domain YIM_RS11860 PF00440 Bacterial regulatory proteins, tetR family YIM_RS11865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YIM_RS11865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YIM_RS11870 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YIM_RS11875 PF02233 NAD(P) transhydrogenase beta subunit YIM_RS11885 PF00403 Heavy-metal-associated domain YIM_RS11885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_RS11885 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS11905 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS11905 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS11910 PF00550 Phosphopantetheine attachment site YIM_RS11915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_RS11915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_RS11920 PF00698 Acyl transferase domain YIM_RS11925 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS11925 PF17853 GGDEF-like domain YIM_RS11945 PF05552 Conserved TM helix YIM_RS11950 PF04973 Nicotinamide mononucleotide transporter YIM_RS11955 PF02652 L-lactate permease YIM_RS11960 PF01070 FMN-dependent dehydrogenase YIM_RS11965 PF17831 Pyruvate dehydrogenase E1 component middle domain YIM_RS11965 PF00456 Transketolase, thiamine diphosphate binding domain YIM_RS11970 PF11253 Protein of unknown function (DUF3052) YIM_RS11975 PF00578 AhpC/TSA family YIM_RS11985 PF13460 NAD(P)H-binding YIM_RS12000 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS12005 PF00561 alpha/beta hydrolase fold YIM_RS12010 PF07690 Major Facilitator Superfamily YIM_RS12020 PF00561 alpha/beta hydrolase fold YIM_RS12040 PF00400 WD domain, G-beta repeat YIM_RS12040 PF00069 Protein kinase domain YIM_RS12050 PF00324 Amino acid permease YIM_RS12060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_RS12060 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_RS12060 PF01336 OB-fold nucleic acid binding domain YIM_RS12060 PF14579 Helix-hairpin-helix motif YIM_RS12060 PF02811 PHP domain YIM_RS12065 PF07690 Major Facilitator Superfamily YIM_RS12075 PF03734 L,D-transpeptidase catalytic domain YIM_RS12075 PF17964 Bacterial Ig domain YIM_RS12085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS12085 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS12085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS12090 PF00561 alpha/beta hydrolase fold YIM_RS12095 PF09335 SNARE associated Golgi protein YIM_RS12100 PF04055 Radical SAM superfamily YIM_RS12100 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YIM_RS12105 PF00106 short chain dehydrogenase YIM_RS12115 PF00440 Bacterial regulatory proteins, tetR family YIM_RS12125 PF03099 Biotin/lipoate A/B protein ligase family YIM_RS12135 PF01370 NAD dependent epimerase/dehydratase family YIM_RS12135 PF08338 Domain of unknown function (DUF1731) YIM_RS12150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_RS12150 PF02817 e3 binding domain YIM_RS12150 PF00364 Biotin-requiring enzyme YIM_RS12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS12155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_RS12170 PF02789 Cytosol aminopeptidase family, N-terminal domain YIM_RS12170 PF00883 Cytosol aminopeptidase family, catalytic domain YIM_RS12190 PF01063 Amino-transferase class IV YIM_RS12195 PF02277 Phosphoribosyltransferase YIM_RS12200 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YIM_RS12205 PF00248 Aldo/keto reductase family YIM_RS12215 PF11241 Protein of unknown function (DUF3043) YIM_RS12220 PF01521 Iron-sulphur cluster biosynthesis YIM_RS12225 PF00294 pfkB family carbohydrate kinase YIM_RS12235 PF01614 Bacterial transcriptional regulator YIM_RS12235 PF09339 IclR helix-turn-helix domain YIM_RS12240 PF00005 ABC transporter YIM_RS12245 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS12255 PF00733 Asparagine synthase YIM_RS12255 PF13537 Glutamine amidotransferase domain YIM_RS12260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YIM_RS12265 PF12270 Cytochrome c oxidase subunit IV YIM_RS12270 PF02885 Glycosyl transferase family, helical bundle domain YIM_RS12270 PF00591 Glycosyl transferase family, a/b domain YIM_RS12280 PF00510 Cytochrome c oxidase subunit III YIM_RS12285 PF00034 Cytochrome c YIM_RS12285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YIM_RS12290 PF00355 Rieske [2Fe-2S] domain YIM_RS12295 PF13631 Cytochrome b(N-terminal)/b6/petB YIM_RS12305 PF01541 GIY-YIG catalytic domain YIM_RS12305 PF00929 Exonuclease YIM_RS12320 PF00005 ABC transporter YIM_RS12340 PF00877 NlpC/P60 family YIM_RS12345 PF00534 Glycosyl transferases group 1 YIM_RS12345 PF13439 Glycosyltransferase Family 4 YIM_RS12350 PF04542 Sigma-70 region 2 YIM_RS12350 PF08281 Sigma-70, region 4 YIM_RS12350 PF12680 SnoaL-like domain YIM_RS12360 PF00440 Bacterial regulatory proteins, tetR family YIM_RS12360 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS12370 PF00067 Cytochrome P450 YIM_RS12375 PF00202 Aminotransferase class-III YIM_RS12380 PF00916 Sulfate permease family YIM_RS12380 PF01740 STAS domain YIM_RS12390 PF06968 Biotin and Thiamin Synthesis associated domain YIM_RS12390 PF04055 Radical SAM superfamily YIM_RS12400 PF01435 Peptidase family M48 YIM_RS12415 PF02445 Quinolinate synthetase A protein YIM_RS12420 PF00890 FAD binding domain YIM_RS12420 PF02910 Fumarate reductase flavoprotein C-term YIM_RS12425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YIM_RS12425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YIM_RS12430 PF00082 Subtilase family YIM_RS12440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_RS12440 PF01872 RibD C-terminal domain YIM_RS12465 PF01580 FtsK/SpoIIIE family YIM_RS12480 PF02575 YbaB/EbfC DNA-binding family YIM_RS12495 PF05108 Type VII secretion system ESX-1, transport TM domain B YIM_RS12500 PF00196 Bacterial regulatory proteins, luxR family YIM_RS12500 PF00072 Response regulator receiver domain YIM_RS12505 PF00795 Carbon-nitrogen hydrolase YIM_RS12510 PF00815 Histidinol dehydrogenase YIM_RS12515 PF00266 Aminotransferase class-V YIM_RS12520 PF00155 Aminotransferase class I and II YIM_RS12525 PF00475 Imidazoleglycerol-phosphate dehydratase YIM_RS12530 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family YIM_RS12535 PF01740 STAS domain YIM_RS12545 PF07228 Stage II sporulation protein E (SpoIIE) YIM_RS12545 PF00672 HAMP domain YIM_RS12550 PF09278 MerR, DNA binding YIM_RS12550 PF00376 MerR family regulatory protein YIM_RS12555 PF00456 Transketolase, thiamine diphosphate binding domain YIM_RS12560 PF02779 Transketolase, pyrimidine binding domain YIM_RS12580 PF00069 Protein kinase domain YIM_RS12580 PF03793 PASTA domain YIM_RS12590 PF01965 DJ-1/PfpI family YIM_RS12605 PF00271 Helicase conserved C-terminal domain YIM_RS12605 PF00270 DEAD/DEAH box helicase YIM_RS12610 PF03405 Fatty acid desaturase YIM_RS12615 PF02585 GlcNAc-PI de-N-acetylase YIM_RS12625 PF12706 Beta-lactamase superfamily domain YIM_RS12630 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS12630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS12630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS12640 PF03259 Roadblock/LC7 domain YIM_RS12655 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS12665 PF00005 ABC transporter YIM_RS12675 PF00117 Glutamine amidotransferase class-I YIM_RS12680 PF00977 Histidine biosynthesis protein YIM_RS12695 PF00977 Histidine biosynthesis protein YIM_RS12705 PF01502 Phosphoribosyl-AMP cyclohydrolase YIM_RS12720 PF00440 Bacterial regulatory proteins, tetR family YIM_RS12720 PF17933 Tetracyclin repressor-like, C-terminal domain YIM_RS12725 PF00425 chorismate binding enzyme YIM_RS12725 PF04715 Anthranilate synthase component I, N terminal region YIM_RS12735 PF00218 Indole-3-glycerol phosphate synthase YIM_RS12740 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS12745 PF00290 Tryptophan synthase alpha chain YIM_RS12755 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS12765 PF00005 ABC transporter YIM_RS12775 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS12805 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS12805 PF00440 Bacterial regulatory proteins, tetR family YIM_RS12810 PF01790 Prolipoprotein diacylglyceryl transferase YIM_RS12815 PF04898 Glutamate synthase central domain YIM_RS12815 PF01645 Conserved region in glutamate synthase YIM_RS12815 PF01493 GXGXG motif YIM_RS12815 PF00310 Glutamine amidotransferases class-II YIM_RS12820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YIM_RS12820 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS12830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS12830 PF03466 LysR substrate binding domain YIM_RS12845 PF01474 Class-II DAHP synthetase family YIM_RS12850 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_RS12850 PF06974 Protein of unknown function (DUF1298) YIM_RS12860 PF12680 SnoaL-like domain YIM_RS12860 PF04542 Sigma-70 region 2 YIM_RS12860 PF08281 Sigma-70, region 4 YIM_RS12865 PF15975 Flotillin YIM_RS12865 PF01145 SPFH domain / Band 7 family YIM_RS12875 PF00069 Protein kinase domain YIM_RS12875 PF03793 PASTA domain YIM_RS12880 PF18367 Rv2175c C-terminal domain of unknown function YIM_RS12890 PF00296 Luciferase-like monooxygenase YIM_RS12900 PF01593 Flavin containing amine oxidoreductase YIM_RS12905 PF00348 Polyprenyl synthetase YIM_RS12925 PF02219 Methylenetetrahydrofolate reductase YIM_RS12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS12935 PF03466 LysR substrate binding domain YIM_RS12940 PF13291 ACT domain YIM_RS12940 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS12985 PF01327 Polypeptide deformylase YIM_RS12990 PF08494 DEAD/H associated YIM_RS12990 PF00271 Helicase conserved C-terminal domain YIM_RS12990 PF00270 DEAD/DEAH box helicase YIM_RS12995 PF00012 Hsp70 protein YIM_RS13005 PF00154 recA bacterial DNA recombination protein YIM_RS13010 PF02631 RecX family YIM_RS13020 PF01081 KDPG and KHG aldolase YIM_RS13025 PF00920 Dehydratase family YIM_RS13040 PF02910 Fumarate reductase flavoprotein C-term YIM_RS13040 PF00890 FAD binding domain YIM_RS13045 PF13183 4Fe-4S dicluster domain YIM_RS13045 PF13085 2Fe-2S iron-sulfur cluster binding domain YIM_RS13050 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS13055 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS13060 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS13065 PF00005 ABC transporter YIM_RS13070 PF00486 Transcriptional regulatory protein, C terminal YIM_RS13070 PF00072 Response regulator receiver domain YIM_RS13075 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS13075 PF00672 HAMP domain YIM_RS13085 PF01402 Ribbon-helix-helix protein, copG family YIM_RS13090 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system YIM_RS13095 PF00919 Uncharacterized protein family UPF0004 YIM_RS13095 PF04055 Radical SAM superfamily YIM_RS13100 PF00919 Uncharacterized protein family UPF0004 YIM_RS13100 PF04055 Radical SAM superfamily YIM_RS13110 PF03993 Domain of Unknown Function (DUF349) YIM_RS13125 PF01678 Diaminopimelate epimerase YIM_RS13495 PF07690 Major Facilitator Superfamily YIM_RS13505 PF13167 GTP-binding GTPase N-terminal YIM_RS13505 PF16360 GTP-binding GTPase Middle Region YIM_RS13505 PF01926 50S ribosome-binding GTPase YIM_RS13515 PF01726 LexA DNA binding domain YIM_RS13515 PF00717 Peptidase S24-like YIM_RS13520 PF01476 LysM domain YIM_RS13525 PF03477 ATP cone domain YIM_RS13530 PF08471 Class II vitamin B12-dependent ribonucleotide reductase YIM_RS13530 PF02867 Ribonucleotide reductase, barrel domain YIM_RS13545 PF01370 NAD dependent epimerase/dehydratase family YIM_RS13545 PF08338 Domain of unknown function (DUF1731) YIM_RS13555 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YIM_RS13555 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_RS13565 PF04434 SWIM zinc finger YIM_RS13570 PF00176 SNF2 family N-terminal domain YIM_RS13570 PF12419 SNF2 Helicase protein YIM_RS13570 PF00271 Helicase conserved C-terminal domain YIM_RS13575 PF01979 Amidohydrolase family YIM_RS13585 PF00440 Bacterial regulatory proteins, tetR family YIM_RS13590 PF02525 Flavodoxin-like fold YIM_RS13595 PF00893 Small Multidrug Resistance protein YIM_RS13600 PF00326 Prolyl oligopeptidase family YIM_RS13600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YIM_RS13605 PF04228 Putative neutral zinc metallopeptidase YIM_RS13610 PF00392 Bacterial regulatory proteins, gntR family YIM_RS13610 PF00155 Aminotransferase class I and II YIM_RS13615 PF00561 alpha/beta hydrolase fold YIM_RS13620 PF00571 CBS domain YIM_RS13640 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_RS13640 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_RS13645 PF01476 LysM domain YIM_RS13645 PF01551 Peptidase family M23 YIM_RS13665 PF01370 NAD dependent epimerase/dehydratase family YIM_RS13670 PF00288 GHMP kinases N terminal domain YIM_RS13670 PF08544 GHMP kinases C terminal YIM_RS13670 PF10509 Galactokinase galactose-binding signature YIM_RS13675 PF02742 Iron dependent repressor, metal binding and dimerisation domain YIM_RS13675 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_RS13675 PF18357 Diphteria toxin repressor SH3 domain YIM_RS13680 PF00581 Rhodanese-like domain YIM_RS13685 PF00850 Histone deacetylase domain YIM_RS13705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS13705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS13710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS13710 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS13710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS13715 PF00106 short chain dehydrogenase YIM_RS13725 PF02405 Permease MlaE YIM_RS13730 PF02405 Permease MlaE YIM_RS13775 PF01225 Mur ligase family, catalytic domain YIM_RS13775 PF02875 Mur ligase family, glutamate ligase domain YIM_RS13775 PF08245 Mur ligase middle domain YIM_RS13780 PF08245 Mur ligase middle domain YIM_RS13780 PF02875 Mur ligase family, glutamate ligase domain YIM_RS13780 PF01225 Mur ligase family, catalytic domain YIM_RS13785 PF00953 Glycosyl transferase family 4 YIM_RS13785 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YIM_RS13790 PF08245 Mur ligase middle domain YIM_RS13795 PF01098 Cell cycle protein YIM_RS13800 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_RS13800 PF04101 Glycosyltransferase family 28 C-terminal domain YIM_RS13805 PF08245 Mur ligase middle domain YIM_RS13805 PF02875 Mur ligase family, glutamate ligase domain YIM_RS13805 PF01225 Mur ligase family, catalytic domain YIM_RS13810 PF03799 Cell division protein FtsQ YIM_RS13810 PF08478 POTRA domain, FtsQ-type YIM_RS13820 PF04978 Protein of unknown function (DUF664) YIM_RS13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS13835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YIM_RS13845 PF04545 Sigma-70, region 4 YIM_RS13845 PF04542 Sigma-70 region 2 YIM_RS13850 PF10099 Anti-sigma-K factor rskA YIM_RS13855 PF00091 Tubulin/FtsZ family, GTPase domain YIM_RS13855 PF12327 FtsZ family, C-terminal domain YIM_RS13860 PF02578 Multi-copper polyphenol oxidoreductase laccase YIM_RS13865 PF01168 Alanine racemase, N-terminal domain YIM_RS13870 PF04472 Cell division protein SepF YIM_RS13880 PF05103 DivIVA protein YIM_RS13895 PF00133 tRNA synthetases class I (I, L, M and V) YIM_RS13895 PF08264 Anticodon-binding domain of tRNA YIM_RS13900 PF00905 Penicillin binding protein transpeptidase domain YIM_RS13910 PF03471 Transporter associated domain YIM_RS13910 PF00999 Sodium/hydrogen exchanger family YIM_RS13920 PF00266 Aminotransferase class-V YIM_RS13925 PF00155 Aminotransferase class I and II YIM_RS13935 PF01252 Signal peptidase (SPase) II YIM_RS13940 PF00849 RNA pseudouridylate synthase YIM_RS13950 PF04542 Sigma-70 region 2 YIM_RS13950 PF08281 Sigma-70, region 4 YIM_RS13950 PF12680 SnoaL-like domain YIM_RS13975 PF00005 ABC transporter YIM_RS13975 PF13732 Domain of unknown function (DUF4162) YIM_RS13980 PF00440 Bacterial regulatory proteins, tetR family YIM_RS13985 PF00501 AMP-binding enzyme YIM_RS14005 PF02374 Anion-transporting ATPase YIM_RS14005 PF17886 HSP20-like domain found in ArsA YIM_RS14015 PF00480 ROK family YIM_RS14025 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_RS14035 PF12146 Serine aminopeptidase, S33 YIM_RS14040 PF01553 Acyltransferase YIM_RS14045 PF16473 3' exoribonuclease, RNase T-like YIM_RS14050 PF00793 DAHP synthetase I family YIM_RS14060 PF00365 Phosphofructokinase YIM_RS14065 PF00221 Aromatic amino acid lyase YIM_RS14070 PF00553 Cellulose binding domain YIM_RS14070 PF00041 Fibronectin type III domain YIM_RS14070 PF00704 Glycosyl hydrolases family 18 YIM_RS14085 PF00224 Pyruvate kinase, barrel domain YIM_RS14085 PF02887 Pyruvate kinase, alpha/beta domain YIM_RS14110 PF13191 AAA ATPase domain YIM_RS14110 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS14115 PF00795 Carbon-nitrogen hydrolase YIM_RS14125 PF00171 Aldehyde dehydrogenase family YIM_RS14135 PF00440 Bacterial regulatory proteins, tetR family YIM_RS14140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS14140 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS14140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS14145 PF02515 CoA-transferase family III YIM_RS14170 PF07690 Major Facilitator Superfamily YIM_RS14185 PF02675 S-adenosylmethionine decarboxylase YIM_RS14190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_RS14190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_RS14195 PF00474 Sodium:solute symporter family YIM_RS14210 PF03259 Roadblock/LC7 domain YIM_RS14225 PF02310 B12 binding domain YIM_RS14225 PF01642 Methylmalonyl-CoA mutase YIM_RS14245 PF00296 Luciferase-like monooxygenase YIM_RS14250 PF00296 Luciferase-like monooxygenase YIM_RS14255 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_RS14255 PF00440 Bacterial regulatory proteins, tetR family YIM_RS14260 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS14260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS14260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS14265 PF00176 SNF2 family N-terminal domain YIM_RS14265 PF12419 SNF2 Helicase protein YIM_RS14265 PF00271 Helicase conserved C-terminal domain YIM_RS14270 PF02525 Flavodoxin-like fold YIM_RS14275 PF12833 Helix-turn-helix domain YIM_RS14275 PF01965 DJ-1/PfpI family YIM_RS14280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS14280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS14285 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS14285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS14285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS14305 PF01575 MaoC like domain YIM_RS14310 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS14310 PF00970 Oxidoreductase FAD-binding domain YIM_RS14310 PF00175 Oxidoreductase NAD-binding domain YIM_RS14320 PF00355 Rieske [2Fe-2S] domain YIM_RS14325 PF00890 FAD binding domain YIM_RS14330 PF00890 FAD binding domain YIM_RS14335 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS14335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS14340 PF12697 Alpha/beta hydrolase family YIM_RS14345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS14350 PF01613 Flavin reductase like domain YIM_RS14355 PF07993 Male sterility protein YIM_RS14355 PF00550 Phosphopantetheine attachment site YIM_RS14355 PF00668 Condensation domain YIM_RS14355 PF00501 AMP-binding enzyme YIM_RS14355 PF13193 AMP-binding enzyme C-terminal domain YIM_RS14365 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS14370 PF04545 Sigma-70, region 4 YIM_RS14370 PF04542 Sigma-70 region 2 YIM_RS14380 PF00487 Fatty acid desaturase YIM_RS14385 PF12464 Maltose acetyltransferase YIM_RS14385 PF14602 Hexapeptide repeat of succinyl-transferase YIM_RS14390 PF00561 alpha/beta hydrolase fold YIM_RS14400 PF00108 Thiolase, N-terminal domain YIM_RS14400 PF02803 Thiolase, C-terminal domain YIM_RS14405 PF00067 Cytochrome P450 YIM_RS14410 PF01209 ubiE/COQ5 methyltransferase family YIM_RS14420 PF00108 Thiolase, N-terminal domain YIM_RS14420 PF02803 Thiolase, C-terminal domain YIM_RS14430 PF13193 AMP-binding enzyme C-terminal domain YIM_RS14430 PF00501 AMP-binding enzyme YIM_RS14435 PF05175 Methyltransferase small domain YIM_RS14440 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS14445 PF00501 AMP-binding enzyme YIM_RS14445 PF13193 AMP-binding enzyme C-terminal domain YIM_RS14450 PF03060 Nitronate monooxygenase YIM_RS14455 PF13520 Amino acid permease YIM_RS14460 PF07702 UTRA domain YIM_RS14460 PF00392 Bacterial regulatory proteins, gntR family YIM_RS14480 PF05683 Fumarase C-terminus YIM_RS14480 PF05681 Fumarate hydratase (Fumerase) YIM_RS14485 PF04539 Sigma-70 region 3 YIM_RS14485 PF04545 Sigma-70, region 4 YIM_RS14485 PF00140 Sigma-70 factor, region 1.2 YIM_RS14485 PF04542 Sigma-70 region 2 YIM_RS14490 PF02580 D-Tyr-tRNA(Tyr) deacylase YIM_RS14495 PF05175 Methyltransferase small domain YIM_RS14505 PF01546 Peptidase family M20/M25/M40 YIM_RS14505 PF07687 Peptidase dimerisation domain YIM_RS14515 PF00294 pfkB family carbohydrate kinase YIM_RS14520 PF04227 Indigoidine synthase A like protein YIM_RS14540 PF00873 AcrB/AcrD/AcrF family YIM_RS14550 PF04851 Type III restriction enzyme, res subunit YIM_RS14555 PF13407 Periplasmic binding protein domain YIM_RS14560 PF00005 ABC transporter YIM_RS14565 PF02653 Branched-chain amino acid transport system / permease component YIM_RS14585 PF00196 Bacterial regulatory proteins, luxR family YIM_RS14585 PF00072 Response regulator receiver domain YIM_RS14630 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS14630 PF00175 Oxidoreductase NAD-binding domain YIM_RS14640 PF00743 Flavin-binding monooxygenase-like YIM_RS14645 PF01370 NAD dependent epimerase/dehydratase family YIM_RS14650 PF01614 Bacterial transcriptional regulator YIM_RS14650 PF09339 IclR helix-turn-helix domain YIM_RS14655 PF00701 Dihydrodipicolinate synthetase family YIM_RS14665 PF00171 Aldehyde dehydrogenase family YIM_RS14670 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain YIM_RS14670 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain YIM_RS14670 PF02278 Polysaccharide lyase family 8, super-sandwich domain YIM_RS14680 PF00106 short chain dehydrogenase YIM_RS14695 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_RS14695 PF16499 Alpha galactosidase A YIM_RS14705 PF01323 DSBA-like thioredoxin domain YIM_RS14715 PF00011 Hsp20/alpha crystallin family YIM_RS14730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS14730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS14730 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS14735 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS14735 PF13823 Alcohol dehydrogenase GroES-associated YIM_RS14735 PF00107 Zinc-binding dehydrogenase YIM_RS14740 PF00871 Acetokinase family YIM_RS14745 PF09364 XFP N-terminal domain YIM_RS14745 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YIM_RS14745 PF09363 XFP C-terminal domain YIM_RS14780 PF00115 Cytochrome C and Quinol oxidase polypeptide I YIM_RS14785 PF01022 Bacterial regulatory protein, arsR family YIM_RS14795 PF03167 Uracil DNA glycosylase superfamily YIM_RS14815 PF07728 AAA domain (dynein-related subfamily) YIM_RS14825 PF05762 VWA domain containing CoxE-like protein YIM_RS14835 PF02728 Copper amine oxidase, N3 domain YIM_RS14835 PF01179 Copper amine oxidase, enzyme domain YIM_RS14845 PF14031 Putative serine dehydratase domain YIM_RS14845 PF01168 Alanine racemase, N-terminal domain YIM_RS14860 PF00296 Luciferase-like monooxygenase YIM_RS14865 PF00440 Bacterial regulatory proteins, tetR family YIM_RS14870 PF04679 ATP dependent DNA ligase C terminal region YIM_RS14870 PF13298 DNA polymerase Ligase (LigD) YIM_RS14870 PF01068 ATP dependent DNA ligase domain YIM_RS14875 PF07690 Major Facilitator Superfamily YIM_RS14880 PF00005 ABC transporter YIM_RS14880 PF03459 TOBE domain YIM_RS14885 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS14900 PF07690 Major Facilitator Superfamily YIM_RS14910 PF01370 NAD dependent epimerase/dehydratase family YIM_RS14920 PF00440 Bacterial regulatory proteins, tetR family YIM_RS14920 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS14935 PF03551 Transcriptional regulator PadR-like family YIM_RS14940 PF02687 FtsX-like permease family YIM_RS14940 PF12704 MacB-like periplasmic core domain YIM_RS14940 PF00005 ABC transporter YIM_RS14960 PF00005 ABC transporter YIM_RS14970 PF00196 Bacterial regulatory proteins, luxR family YIM_RS14970 PF00072 Response regulator receiver domain YIM_RS14975 PF03176 MMPL family YIM_RS14975 PF12823 Domain of unknown function (DUF3817) YIM_RS14990 PF00440 Bacterial regulatory proteins, tetR family YIM_RS15000 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_RS15005 PF00891 O-methyltransferase domain YIM_RS15025 PF00348 Polyprenyl synthetase YIM_RS15030 PF00155 Aminotransferase class I and II YIM_RS15035 PF06722 Protein of unknown function (DUF1205) YIM_RS15045 PF04542 Sigma-70 region 2 YIM_RS15045 PF12680 SnoaL-like domain YIM_RS15045 PF08281 Sigma-70, region 4 YIM_RS15050 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA YIM_RS15075 PF01590 GAF domain YIM_RS15075 PF02954 Bacterial regulatory protein, Fis family YIM_RS15090 PF00107 Zinc-binding dehydrogenase YIM_RS15090 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS15095 PF04075 F420H(2)-dependent quinone reductase YIM_RS15105 PF00561 alpha/beta hydrolase fold YIM_RS15110 PF03704 Bacterial transcriptional activator domain YIM_RS15110 PF00486 Transcriptional regulatory protein, C terminal YIM_RS15110 PF00931 NB-ARC domain YIM_RS15115 PF03466 LysR substrate binding domain YIM_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS15140 PF01614 Bacterial transcriptional regulator YIM_RS15140 PF09339 IclR helix-turn-helix domain YIM_RS15150 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal YIM_RS15150 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal YIM_RS15155 PF00775 Dioxygenase YIM_RS15155 PF04444 Catechol dioxygenase N terminus YIM_RS15160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS15160 PF13378 Enolase C-terminal domain-like YIM_RS15165 PF02426 Muconolactone delta-isomerase YIM_RS15170 PF01156 Inosine-uridine preferring nucleoside hydrolase YIM_RS15190 PF00067 Cytochrome P450 YIM_RS15215 PF03780 Asp23 family, cell envelope-related function YIM_RS15225 PF02469 Fasciclin domain YIM_RS15235 PF07228 Stage II sporulation protein E (SpoIIE) YIM_RS15240 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS15240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS15240 PF01590 GAF domain YIM_RS15240 PF08446 PAS fold YIM_RS15240 PF00360 Phytochrome region YIM_RS15245 PF00072 Response regulator receiver domain YIM_RS15255 PF00440 Bacterial regulatory proteins, tetR family YIM_RS15260 PF03466 LysR substrate binding domain YIM_RS15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS15270 PF01494 FAD binding domain YIM_RS15285 PF00072 Response regulator receiver domain YIM_RS15285 PF00196 Bacterial regulatory proteins, luxR family YIM_RS15290 PF07730 Histidine kinase YIM_RS15310 PF04686 Streptomyces sporulation and cell division protein, SsgA YIM_RS15340 PF01555 DNA methylase YIM_RS15355 PF13649 Methyltransferase domain YIM_RS15385 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS15385 PF00107 Zinc-binding dehydrogenase YIM_RS15390 PF00561 alpha/beta hydrolase fold YIM_RS15395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS15395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS15410 PF00698 Acyl transferase domain YIM_RS15410 PF08659 KR domain YIM_RS15410 PF14765 Polyketide synthase dehydratase YIM_RS15410 PF00550 Phosphopantetheine attachment site YIM_RS15410 PF00107 Zinc-binding dehydrogenase YIM_RS15410 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS15410 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS15410 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS15410 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS15415 PF01638 HxlR-like helix-turn-helix YIM_RS15420 PF01565 FAD binding domain YIM_RS15420 PF08031 Berberine and berberine like YIM_RS15425 PF00296 Luciferase-like monooxygenase YIM_RS15435 PF00171 Aldehyde dehydrogenase family YIM_RS15455 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS15455 PF00107 Zinc-binding dehydrogenase YIM_RS15465 PF00248 Aldo/keto reductase family YIM_RS15475 PF00356 Bacterial regulatory proteins, lacI family YIM_RS15510 PF01032 FecCD transport family YIM_RS15520 PF00005 ABC transporter YIM_RS15525 PF01799 [2Fe-2S] binding domain YIM_RS15525 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS15525 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS15530 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS15530 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS15535 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS15535 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS15540 PF06719 AraC-type transcriptional regulator N-terminus YIM_RS15540 PF12833 Helix-turn-helix domain YIM_RS15545 PF13360 PQQ-like domain YIM_RS15545 PF00069 Protein kinase domain YIM_RS15555 PF00440 Bacterial regulatory proteins, tetR family YIM_RS15575 PF01022 Bacterial regulatory protein, arsR family YIM_RS15590 PF01370 NAD dependent epimerase/dehydratase family YIM_RS15605 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS15605 PF00107 Zinc-binding dehydrogenase YIM_RS15610 PF07859 alpha/beta hydrolase fold YIM_RS15620 PF03737 Aldolase/RraA YIM_RS15625 PF00694 Aconitase C-terminal domain YIM_RS15630 PF00330 Aconitase family (aconitate hydratase) YIM_RS15660 PF08719 Domain of unknown function (DUF1768) YIM_RS15670 PF05593 RHS Repeat YIM_RS15670 PF03527 RHS protein YIM_RS15685 PF00544 Pectate lyase YIM_RS15690 PF03422 Carbohydrate binding module (family 6) YIM_RS15690 PF16990 Carbohydrate binding module (family 35) YIM_RS15690 PF13199 Glycosyl hydrolase family 66 YIM_RS15705 PF07690 Major Facilitator Superfamily YIM_RS15715 PF13847 Methyltransferase domain YIM_RS15720 PF00486 Transcriptional regulatory protein, C terminal YIM_RS15720 PF00931 NB-ARC domain YIM_RS15720 PF03704 Bacterial transcriptional activator domain YIM_RS15725 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS15725 PF14765 Polyketide synthase dehydratase YIM_RS15725 PF00550 Phosphopantetheine attachment site YIM_RS15725 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS15725 PF00698 Acyl transferase domain YIM_RS15725 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS15725 PF08659 KR domain YIM_RS15730 PF13193 AMP-binding enzyme C-terminal domain YIM_RS15730 PF00501 AMP-binding enzyme YIM_RS15730 PF00550 Phosphopantetheine attachment site YIM_RS15730 PF00668 Condensation domain YIM_RS15735 PF01494 FAD binding domain YIM_RS15745 PF06965 Na+/H+ antiporter 1 YIM_RS15750 PF02683 Cytochrome C biogenesis protein transmembrane region YIM_RS15755 PF00578 AhpC/TSA family YIM_RS15775 PF00931 NB-ARC domain YIM_RS15775 PF03704 Bacterial transcriptional activator domain YIM_RS15775 PF00486 Transcriptional regulatory protein, C terminal YIM_RS15780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS15780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS15790 PF07690 Major Facilitator Superfamily YIM_RS15795 PF01022 Bacterial regulatory protein, arsR family YIM_RS15805 PF04650 YSIRK type signal peptide YIM_RS15805 PF02973 Sialidase, N-terminal domain YIM_RS15805 PF13088 BNR repeat-like domain YIM_RS15815 PF02687 FtsX-like permease family YIM_RS15815 PF12704 MacB-like periplasmic core domain YIM_RS15815 PF00005 ABC transporter YIM_RS15835 PF00440 Bacterial regulatory proteins, tetR family YIM_RS15855 PF16499 Alpha galactosidase A YIM_RS15855 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_RS15860 PF04616 Glycosyl hydrolases family 43 YIM_RS15860 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain YIM_RS15865 PF03664 Glycosyl hydrolase family 62 YIM_RS15865 PF00652 Ricin-type beta-trefoil lectin domain YIM_RS15870 PF00759 Glycosyl hydrolase family 9 YIM_RS15870 PF00553 Cellulose binding domain YIM_RS15870 PF00942 Cellulose binding domain YIM_RS15870 PF00041 Fibronectin type III domain YIM_RS15875 PF01965 DJ-1/PfpI family YIM_RS15905 PF01212 Beta-eliminating lyase YIM_RS15910 PF00999 Sodium/hydrogen exchanger family YIM_RS15915 PF04820 Tryptophan halogenase YIM_RS15920 PF00501 AMP-binding enzyme YIM_RS15920 PF00550 Phosphopantetheine attachment site YIM_RS15920 PF00668 Condensation domain YIM_RS15920 PF13193 AMP-binding enzyme C-terminal domain YIM_RS15935 PF01451 Low molecular weight phosphotyrosine protein phosphatase YIM_RS15940 PF01022 Bacterial regulatory protein, arsR family YIM_RS15945 PF01758 Sodium Bile acid symporter family YIM_RS15955 PF01061 ABC-2 type transporter YIM_RS15960 PF00005 ABC transporter YIM_RS15960 PF13732 Domain of unknown function (DUF4162) YIM_RS15980 PF01494 FAD binding domain YIM_RS15995 PF12680 SnoaL-like domain YIM_RS15995 PF08281 Sigma-70, region 4 YIM_RS15995 PF04542 Sigma-70 region 2 YIM_RS16000 PF00557 Metallopeptidase family M24 YIM_RS16010 PF07690 Major Facilitator Superfamily YIM_RS16015 PF00376 MerR family regulatory protein YIM_RS16015 PF09278 MerR, DNA binding YIM_RS16020 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS16020 PF00107 Zinc-binding dehydrogenase YIM_RS16040 PF01494 FAD binding domain YIM_RS16045 PF00175 Oxidoreductase NAD-binding domain YIM_RS16045 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS16060 PF02447 GntP family permease YIM_RS16065 PF03466 LysR substrate binding domain YIM_RS16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS16070 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_RS16075 PF02595 Glycerate kinase family YIM_RS16080 PF07690 Major Facilitator Superfamily YIM_RS16085 PF01638 HxlR-like helix-turn-helix YIM_RS16100 PF00295 Glycosyl hydrolases family 28 YIM_RS16115 PF00931 NB-ARC domain YIM_RS16115 PF00486 Transcriptional regulatory protein, C terminal YIM_RS16115 PF03704 Bacterial transcriptional activator domain YIM_RS16120 PF03466 LysR substrate binding domain YIM_RS16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS16125 PF07690 Major Facilitator Superfamily YIM_RS16185 PF01261 Xylose isomerase-like TIM barrel YIM_RS16190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS16190 PF01842 ACT domain YIM_RS16190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS16220 PF00266 Aminotransferase class-V YIM_RS16225 PF01565 FAD binding domain YIM_RS16225 PF02913 FAD linked oxidases, C-terminal domain YIM_RS16225 PF13183 4Fe-4S dicluster domain YIM_RS16230 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_RS16235 PF01261 Xylose isomerase-like TIM barrel YIM_RS16240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS16240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS16245 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS16245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS16245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS16250 PF02595 Glycerate kinase family YIM_RS16270 PF00583 Acetyltransferase (GNAT) family YIM_RS16280 PF01609 Transposase DDE domain YIM_RS16290 PF12697 Alpha/beta hydrolase family YIM_RS16295 PF09278 MerR, DNA binding YIM_RS16295 PF00376 MerR family regulatory protein YIM_RS16300 PF00248 Aldo/keto reductase family YIM_RS16305 PF00561 alpha/beta hydrolase fold YIM_RS16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS16315 PF03466 LysR substrate binding domain YIM_RS16320 PF00248 Aldo/keto reductase family YIM_RS16330 PF01625 Peptide methionine sulfoxide reductase YIM_RS16335 PF01494 FAD binding domain YIM_RS16365 PF00892 EamA-like transporter family YIM_RS16380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS16380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS16385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS16390 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16395 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16395 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS16400 PF00005 ABC transporter YIM_RS16400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS16405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS16405 PF00005 ABC transporter YIM_RS16415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS16415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS16420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS16420 PF13378 Enolase C-terminal domain-like YIM_RS16425 PF01614 Bacterial transcriptional regulator YIM_RS16425 PF09339 IclR helix-turn-helix domain YIM_RS16440 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS16445 PF00486 Transcriptional regulatory protein, C terminal YIM_RS16445 PF00931 NB-ARC domain YIM_RS16445 PF03704 Bacterial transcriptional activator domain YIM_RS16460 PF13185 GAF domain YIM_RS16460 PF07730 Histidine kinase YIM_RS16475 PF00144 Beta-lactamase YIM_RS16480 PF00486 Transcriptional regulatory protein, C terminal YIM_RS16480 PF00931 NB-ARC domain YIM_RS16480 PF03704 Bacterial transcriptional activator domain YIM_RS16485 PF00931 NB-ARC domain YIM_RS16485 PF00486 Transcriptional regulatory protein, C terminal YIM_RS16485 PF03704 Bacterial transcriptional activator domain YIM_RS16490 PF07519 Tannase and feruloyl esterase YIM_RS16500 PF00072 Response regulator receiver domain YIM_RS16500 PF00196 Bacterial regulatory proteins, luxR family YIM_RS16505 PF00561 alpha/beta hydrolase fold YIM_RS16510 PF02566 OsmC-like protein YIM_RS16515 PF00005 ABC transporter YIM_RS16520 PF00005 ABC transporter YIM_RS16525 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS16525 PF00107 Zinc-binding dehydrogenase YIM_RS16530 PF00392 Bacterial regulatory proteins, gntR family YIM_RS16530 PF07702 UTRA domain YIM_RS16535 PF09084 NMT1/THI5 like YIM_RS16540 PF00005 ABC transporter YIM_RS16545 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16550 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS16555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS16555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS16560 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS16560 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS16565 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS16565 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS16565 PF01799 [2Fe-2S] binding domain YIM_RS16570 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_RS16570 PF00440 Bacterial regulatory proteins, tetR family YIM_RS16580 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS16580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS16580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS16585 PF02515 CoA-transferase family III YIM_RS16590 PF00202 Aminotransferase class-III YIM_RS16600 PF01179 Copper amine oxidase, enzyme domain YIM_RS16600 PF02728 Copper amine oxidase, N3 domain YIM_RS16605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS16610 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16615 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16615 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS16620 PF00005 ABC transporter YIM_RS16620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS16625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS16625 PF00005 ABC transporter YIM_RS16640 PF00171 Aldehyde dehydrogenase family YIM_RS16645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YIM_RS16645 PF00356 Bacterial regulatory proteins, lacI family YIM_RS16650 PF07690 Major Facilitator Superfamily YIM_RS16655 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_RS16665 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain YIM_RS16665 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain YIM_RS16665 PF08531 Alpha-L-rhamnosidase N-terminal domain YIM_RS16665 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain YIM_RS16670 PF09423 PhoD-like phosphatase YIM_RS16670 PF16655 PhoD-like phosphatase, N-terminal domain YIM_RS16705 PF02779 Transketolase, pyrimidine binding domain YIM_RS16705 PF02780 Transketolase, C-terminal domain YIM_RS16710 PF00676 Dehydrogenase E1 component YIM_RS16735 PF00171 Aldehyde dehydrogenase family YIM_RS16745 PF00392 Bacterial regulatory proteins, gntR family YIM_RS16745 PF07702 UTRA domain YIM_RS16750 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_RS16750 PF00440 Bacterial regulatory proteins, tetR family YIM_RS16755 PF00107 Zinc-binding dehydrogenase YIM_RS16755 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS16785 PF00196 Bacterial regulatory proteins, luxR family YIM_RS16785 PF00072 Response regulator receiver domain YIM_RS16795 PF00005 ABC transporter YIM_RS16795 PF02687 FtsX-like permease family YIM_RS16795 PF12704 MacB-like periplasmic core domain YIM_RS16800 PF02687 FtsX-like permease family YIM_RS16800 PF12704 MacB-like periplasmic core domain YIM_RS16815 PF01227 GTP cyclohydrolase I YIM_RS16825 PF00005 ABC transporter YIM_RS16830 PF00950 ABC 3 transport family YIM_RS16840 PF01297 Zinc-uptake complex component A periplasmic YIM_RS16865 PF13649 Methyltransferase domain YIM_RS16870 PF00440 Bacterial regulatory proteins, tetR family YIM_RS16900 PF05593 RHS Repeat YIM_RS16900 PF03527 RHS protein YIM_RS16940 PF01566 Natural resistance-associated macrophage protein YIM_RS16945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS16945 PF13378 Enolase C-terminal domain-like YIM_RS16950 PF01842 ACT domain YIM_RS16950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS16950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS16960 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS16965 PF00248 Aldo/keto reductase family YIM_RS16970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS16970 PF00005 ABC transporter YIM_RS16975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS16975 PF00005 ABC transporter YIM_RS16980 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS16980 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS16990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS16995 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YIM_RS17000 PF08220 DeoR-like helix-turn-helix domain YIM_RS17000 PF00455 DeoR C terminal sensor domain YIM_RS17020 PF00404 Dockerin type I domain YIM_RS17020 PF00657 GDSL-like Lipase/Acylhydrolase YIM_RS17025 PF00005 ABC transporter YIM_RS17035 PF01032 FecCD transport family YIM_RS17050 PF00067 Cytochrome P450 YIM_RS17055 PF02195 ParB-like nuclease domain YIM_RS17060 PF00501 AMP-binding enzyme YIM_RS17060 PF00668 Condensation domain YIM_RS17060 PF00550 Phosphopantetheine attachment site YIM_RS17060 PF13193 AMP-binding enzyme C-terminal domain YIM_RS17065 PF13193 AMP-binding enzyme C-terminal domain YIM_RS17065 PF00668 Condensation domain YIM_RS17065 PF00550 Phosphopantetheine attachment site YIM_RS17065 PF00975 Thioesterase domain YIM_RS17065 PF00501 AMP-binding enzyme YIM_RS17070 PF00668 Condensation domain YIM_RS17070 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS17070 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS17070 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS17070 PF00698 Acyl transferase domain YIM_RS17070 PF00550 Phosphopantetheine attachment site YIM_RS17075 PF00296 Luciferase-like monooxygenase YIM_RS17080 PF00501 AMP-binding enzyme YIM_RS17080 PF00550 Phosphopantetheine attachment site YIM_RS17080 PF00668 Condensation domain YIM_RS17080 PF13193 AMP-binding enzyme C-terminal domain YIM_RS17090 PF00501 AMP-binding enzyme YIM_RS17090 PF13193 AMP-binding enzyme C-terminal domain YIM_RS17090 PF00668 Condensation domain YIM_RS17090 PF07993 Male sterility protein YIM_RS17090 PF00550 Phosphopantetheine attachment site YIM_RS17105 PF03621 MbtH-like protein YIM_RS17110 PF08241 Methyltransferase domain YIM_RS17120 PF00326 Prolyl oligopeptidase family YIM_RS17120 PF07676 WD40-like Beta Propeller Repeat YIM_RS17125 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS17130 PF01425 Amidase YIM_RS17145 PF00561 alpha/beta hydrolase fold YIM_RS17150 PF13977 BetI-type transcriptional repressor, C-terminal YIM_RS17150 PF00440 Bacterial regulatory proteins, tetR family YIM_RS17155 PF00107 Zinc-binding dehydrogenase YIM_RS17155 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS17155 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS17155 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS17155 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS17155 PF00698 Acyl transferase domain YIM_RS17155 PF08659 KR domain YIM_RS17155 PF00550 Phosphopantetheine attachment site YIM_RS17155 PF14765 Polyketide synthase dehydratase YIM_RS17165 PF00893 Small Multidrug Resistance protein YIM_RS17170 PF02397 Bacterial sugar transferase YIM_RS17175 PF00881 Nitroreductase family YIM_RS17180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YIM_RS17180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_RS17180 PF03129 Anticodon binding domain YIM_RS17185 PF01230 HIT domain YIM_RS17200 PF01066 CDP-alcohol phosphatidyltransferase YIM_RS17205 PF03279 Bacterial lipid A biosynthesis acyltransferase YIM_RS17210 PF13439 Glycosyltransferase Family 4 YIM_RS17220 PF00679 Elongation factor G C-terminus YIM_RS17220 PF00009 Elongation factor Tu GTP binding domain YIM_RS17220 PF03764 Elongation factor G, domain IV YIM_RS17220 PF14492 Elongation Factor G, domain II YIM_RS17220 PF03144 Elongation factor Tu domain 2 YIM_RS17225 PF01680 SOR/SNZ family YIM_RS17235 PF01638 HxlR-like helix-turn-helix YIM_RS17245 PF00925 GTP cyclohydrolase II YIM_RS17245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YIM_RS17275 PF01174 SNO glutamine amidotransferase family YIM_RS17280 PF01709 Transcriptional regulator YIM_RS17290 PF02075 Crossover junction endodeoxyribonuclease RuvC YIM_RS17295 PF01330 RuvA N terminal domain YIM_RS17295 PF07499 RuvA, C-terminal domain YIM_RS17300 PF05491 RuvB C-terminal winged helix domain YIM_RS17300 PF17864 RuvB AAA lid domain YIM_RS17300 PF05496 Holliday junction DNA helicase RuvB P-loop domain YIM_RS17305 PF02699 Preprotein translocase subunit YIM_RS17310 PF07549 SecD/SecF GG Motif YIM_RS17310 PF02355 Protein export membrane protein YIM_RS17315 PF02355 Protein export membrane protein YIM_RS17315 PF07549 SecD/SecF GG Motif YIM_RS17320 PF00156 Phosphoribosyl transferase domain YIM_RS17325 PF04607 Region found in RelA / SpoT proteins YIM_RS17325 PF02824 TGS domain YIM_RS17325 PF13291 ACT domain YIM_RS17330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS17330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS17330 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS17335 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YIM_RS17340 PF00753 Metallo-beta-lactamase superfamily YIM_RS17355 PF01614 Bacterial transcriptional regulator YIM_RS17355 PF09339 IclR helix-turn-helix domain YIM_RS17360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS17365 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS17370 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS17375 PF00005 ABC transporter YIM_RS17375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS17380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS17380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS17385 PF02633 Creatinine amidohydrolase YIM_RS17425 PF13649 Methyltransferase domain YIM_RS17430 PF04055 Radical SAM superfamily YIM_RS17435 PF02938 GAD domain YIM_RS17435 PF01336 OB-fold nucleic acid binding domain YIM_RS17435 PF00152 tRNA synthetases class II (D, K and N) YIM_RS17460 PF01494 FAD binding domain YIM_RS17470 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS17470 PF12002 MgsA AAA+ ATPase C terminal YIM_RS17470 PF16193 AAA C-terminal domain YIM_RS17475 PF05506 Domain of unknown function (DUF756) YIM_RS17475 PF04185 Phosphoesterase family YIM_RS17480 PF01259 SAICAR synthetase YIM_RS17500 PF01411 tRNA synthetases class II (A) YIM_RS17500 PF02272 DHHA1 domain YIM_RS17500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YIM_RS17505 PF03652 Holliday junction resolvase YIM_RS17510 PF02618 YceG-like family YIM_RS17515 PF01488 Shikimate / quinate 5-dehydrogenase YIM_RS17515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YIM_RS17515 PF08501 Shikimate dehydrogenase substrate binding domain YIM_RS17520 PF04229 GrpB protein YIM_RS17530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS17530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS17530 PF01842 ACT domain YIM_RS17545 PF00067 Cytochrome P450 YIM_RS17550 PF00975 Thioesterase domain YIM_RS17555 PF00550 Phosphopantetheine attachment site YIM_RS17555 PF00668 Condensation domain YIM_RS17555 PF13193 AMP-binding enzyme C-terminal domain YIM_RS17555 PF00501 AMP-binding enzyme YIM_RS17570 PF00381 PTS HPr component phosphorylation site YIM_RS17575 PF02378 Phosphotransferase system, EIIC YIM_RS17580 PF07702 UTRA domain YIM_RS17580 PF00392 Bacterial regulatory proteins, gntR family YIM_RS17585 PF00367 phosphotransferase system, EIIB YIM_RS17590 PF02378 Phosphotransferase system, EIIC YIM_RS17590 PF00367 phosphotransferase system, EIIB YIM_RS17590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YIM_RS17605 PF04545 Sigma-70, region 4 YIM_RS17605 PF04542 Sigma-70 region 2 YIM_RS17620 PF01264 Chorismate synthase YIM_RS17625 PF01202 Shikimate kinase YIM_RS17630 PF01761 3-dehydroquinate synthase YIM_RS17635 PF01220 Dehydroquinase class II YIM_RS17655 PF00557 Metallopeptidase family M24 YIM_RS17655 PF01321 Creatinase/Prolidase N-terminal domain YIM_RS17660 PF08207 Elongation factor P (EF-P) KOW-like domain YIM_RS17660 PF09285 Elongation factor P, C-terminal YIM_RS17660 PF01132 Elongation factor P (EF-P) OB domain YIM_RS17665 PF01029 NusB family YIM_RS17675 PF00156 Phosphoribosyl transferase domain YIM_RS17680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_RS17680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_RS17685 PF01979 Amidohydrolase family YIM_RS17695 PF00117 Glutamine amidotransferase class-I YIM_RS17695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YIM_RS17700 PF02142 MGS-like domain YIM_RS17700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YIM_RS17700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS17705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YIM_RS17715 PF00625 Guanylate kinase YIM_RS17720 PF01192 RNA polymerase Rpb6 YIM_RS17725 PF02441 Flavoprotein YIM_RS17725 PF04127 DNA / pantothenate metabolism flavoprotein YIM_RS17730 PF02773 S-adenosylmethionine synthetase, C-terminal domain YIM_RS17730 PF02772 S-adenosylmethionine synthetase, central domain YIM_RS17730 PF00438 S-adenosylmethionine synthetase, N-terminal domain YIM_RS17735 PF17764 3′ DNA-binding domain (3′BD) YIM_RS17740 PF07729 FCD domain YIM_RS17740 PF00392 Bacterial regulatory proteins, gntR family YIM_RS17745 PF00585 C-terminal regulatory domain of Threonine dehydratase YIM_RS17745 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS17755 PF00551 Formyl transferase YIM_RS17755 PF02911 Formyl transferase, C-terminal domain YIM_RS17765 PF01029 NusB family YIM_RS17765 PF01189 16S rRNA methyltransferase RsmB/F YIM_RS17770 PF04127 DNA / pantothenate metabolism flavoprotein YIM_RS17770 PF02441 Flavoprotein YIM_RS17775 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS17775 PF00107 Zinc-binding dehydrogenase YIM_RS17780 PF00834 Ribulose-phosphate 3 epimerase family YIM_RS17785 PF00677 Lumazine binding domain YIM_RS17790 PF00925 GTP cyclohydrolase II YIM_RS17790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YIM_RS17795 PF00885 6,7-dimethyl-8-ribityllumazine synthase YIM_RS17800 PF10756 Bacterial PH domain YIM_RS17815 PF01541 GIY-YIG catalytic domain YIM_RS17815 PF02151 UvrB/uvrC motif YIM_RS17815 PF08459 UvrC Helix-hairpin-helix N-terminal YIM_RS17820 PF03668 P-loop ATPase protein family YIM_RS17825 PF01933 Uncharacterised protein family UPF0052 YIM_RS17830 PF14527 WhiA LAGLIDADG-like domain YIM_RS17830 PF10298 WhiA N-terminal LAGLIDADG-like domain YIM_RS17830 PF02650 WhiA C-terminal HTH domain YIM_RS17835 PF00704 Glycosyl hydrolases family 18 YIM_RS17835 PF00041 Fibronectin type III domain YIM_RS17875 PF01810 LysE type translocator YIM_RS17885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YIM_RS17885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YIM_RS17890 PF00162 Phosphoglycerate kinase YIM_RS17895 PF00121 Triosephosphate isomerase YIM_RS17900 PF03840 Preprotein translocase SecG subunit YIM_RS17910 PF00672 HAMP domain YIM_RS17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS17910 PF07730 Histidine kinase YIM_RS17910 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YIM_RS17915 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YIM_RS17925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YIM_RS17925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YIM_RS17930 PF00342 Phosphoglucose isomerase YIM_RS17935 PF00923 Transaldolase/Fructose-6-phosphate aldolase YIM_RS17940 PF02779 Transketolase, pyrimidine binding domain YIM_RS17940 PF00456 Transketolase, thiamine diphosphate binding domain YIM_RS17940 PF02780 Transketolase, C-terminal domain YIM_RS17945 PF01040 UbiA prenyltransferase family YIM_RS17955 PF01638 HxlR-like helix-turn-helix YIM_RS17960 PF13538 UvrD-like helicase C-terminal domain YIM_RS17965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YIM_RS17965 PF05698 Bacterial trigger factor protein (TF) C-terminus YIM_RS17965 PF05697 Bacterial trigger factor protein (TF) YIM_RS17970 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS17970 PF00107 Zinc-binding dehydrogenase YIM_RS17995 PF13732 Domain of unknown function (DUF4162) YIM_RS17995 PF00005 ABC transporter YIM_RS18010 PF01458 Uncharacterized protein family (UPF0051) YIM_RS18015 PF01458 Uncharacterized protein family (UPF0051) YIM_RS18020 PF00005 ABC transporter YIM_RS18025 PF00266 Aminotransferase class-V YIM_RS18030 PF01592 NifU-like N terminal domain YIM_RS18035 PF01883 Iron-sulfur cluster assembly protein YIM_RS18040 PF00117 Glutamine amidotransferase class-I YIM_RS18040 PF06418 CTP synthase N-terminus YIM_RS18045 PF03466 LysR substrate binding domain YIM_RS18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS18050 PF03109 ABC1 family YIM_RS18055 PF07730 Histidine kinase YIM_RS18060 PF00196 Bacterial regulatory proteins, luxR family YIM_RS18060 PF00072 Response regulator receiver domain YIM_RS18100 PF17151 Periplasmic sensor domain YIM_RS18100 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS18110 PF01966 HD domain YIM_RS18110 PF13286 Phosphohydrolase-associated domain YIM_RS18120 PF16326 ABC transporter C-terminal domain YIM_RS18120 PF12848 ABC transporter YIM_RS18120 PF00005 ABC transporter YIM_RS18135 PF00664 ABC transporter transmembrane region YIM_RS18135 PF00005 ABC transporter YIM_RS18140 PF13580 SIS domain YIM_RS18145 PF12697 Alpha/beta hydrolase family YIM_RS18155 PF03816 Cell envelope-related transcriptional attenuator domain YIM_RS18160 PF00578 AhpC/TSA family YIM_RS18165 PF13426 PAS domain YIM_RS18165 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS18165 PF00563 EAL domain YIM_RS18170 PF00067 Cytochrome P450 YIM_RS18175 PF08267 Cobalamin-independent synthase, N-terminal domain YIM_RS18175 PF01717 Cobalamin-independent synthase, Catalytic domain YIM_RS18180 PF00268 Ribonucleotide reductase, small chain YIM_RS18185 PF03477 ATP cone domain YIM_RS18185 PF00317 Ribonucleotide reductase, all-alpha domain YIM_RS18185 PF02867 Ribonucleotide reductase, barrel domain YIM_RS18195 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS18200 PF07859 alpha/beta hydrolase fold YIM_RS18205 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_RS18205 PF08608 Wyosine base formation YIM_RS18215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS18215 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS18215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS18220 PF01039 Carboxyl transferase domain YIM_RS18225 PF02785 Biotin carboxylase C-terminal domain YIM_RS18225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS18225 PF00364 Biotin-requiring enzyme YIM_RS18225 PF00289 Biotin carboxylase, N-terminal domain YIM_RS18230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS18230 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS18230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS18240 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_RS18240 PF00440 Bacterial regulatory proteins, tetR family YIM_RS18250 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS18250 PF17151 Periplasmic sensor domain YIM_RS18255 PF03171 2OG-Fe(II) oxygenase superfamily YIM_RS18255 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_RS18265 PF06441 Epoxide hydrolase N terminus YIM_RS18275 PF00440 Bacterial regulatory proteins, tetR family YIM_RS18290 PF01039 Carboxyl transferase domain YIM_RS18295 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_RS18295 PF06029 AlkA N-terminal domain YIM_RS18295 PF02805 Metal binding domain of Ada YIM_RS18295 PF12833 Helix-turn-helix domain YIM_RS18300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_RS18300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_RS18305 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS18315 PF00440 Bacterial regulatory proteins, tetR family YIM_RS18325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS18325 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS18325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS18330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS18330 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS18330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS18335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS18335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS18335 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS18340 PF01636 Phosphotransferase enzyme family YIM_RS18345 PF01575 MaoC like domain YIM_RS18360 PF00392 Bacterial regulatory proteins, gntR family YIM_RS18360 PF07729 FCD domain YIM_RS18365 PF00072 Response regulator receiver domain YIM_RS18365 PF00196 Bacterial regulatory proteins, luxR family YIM_RS18370 PF00931 NB-ARC domain YIM_RS18370 PF03704 Bacterial transcriptional activator domain YIM_RS18370 PF00486 Transcriptional regulatory protein, C terminal YIM_RS18380 PF03621 MbtH-like protein YIM_RS18385 PF03364 Polyketide cyclase / dehydrase and lipid transport YIM_RS18420 PF01895 PhoU domain YIM_RS18425 PF05235 CHAD domain YIM_RS18425 PF01928 CYTH domain YIM_RS18430 PF00072 Response regulator receiver domain YIM_RS18430 PF00196 Bacterial regulatory proteins, luxR family YIM_RS18440 PF16448 LapD/MoxY periplasmic domain YIM_RS18440 PF00672 HAMP domain YIM_RS18440 PF07730 Histidine kinase YIM_RS18445 PF00196 Bacterial regulatory proteins, luxR family YIM_RS18445 PF00072 Response regulator receiver domain YIM_RS18460 PF01975 Survival protein SurE YIM_RS18475 PF18844 Bacterial archaeo-eukaryotic release factor family 2 YIM_RS18485 PF00849 RNA pseudouridylate synthase YIM_RS18500 PF00501 AMP-binding enzyme YIM_RS18500 PF13193 AMP-binding enzyme C-terminal domain YIM_RS18510 PF08220 DeoR-like helix-turn-helix domain YIM_RS18510 PF00455 DeoR C terminal sensor domain YIM_RS18515 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation YIM_RS18515 PF14508 Glycosyl-hydrolase 97 N-terminal YIM_RS18515 PF10566 Glycoside hydrolase 97 YIM_RS18520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_RS18520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_RS18525 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_RS18530 PF00356 Bacterial regulatory proteins, lacI family YIM_RS18570 PF08713 DNA alkylation repair enzyme YIM_RS18590 PF02678 Pirin YIM_RS18590 PF05726 Pirin C-terminal cupin domain YIM_RS18595 PF01039 Carboxyl transferase domain YIM_RS18600 PF00196 Bacterial regulatory proteins, luxR family YIM_RS18620 PF00067 Cytochrome P450 YIM_RS18630 PF01300 Telomere recombination YIM_RS18650 PF07690 Major Facilitator Superfamily YIM_RS18655 PF00069 Protein kinase domain YIM_RS18655 PF13191 AAA ATPase domain YIM_RS18670 PF01594 AI-2E family transporter YIM_RS18680 PF01321 Creatinase/Prolidase N-terminal domain YIM_RS18680 PF00557 Metallopeptidase family M24 YIM_RS18695 PF07687 Peptidase dimerisation domain YIM_RS18695 PF01546 Peptidase family M20/M25/M40 YIM_RS18700 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) YIM_RS18705 PF00440 Bacterial regulatory proteins, tetR family YIM_RS18730 PF00005 ABC transporter YIM_RS18740 PF00072 Response regulator receiver domain YIM_RS18740 PF00196 Bacterial regulatory proteins, luxR family YIM_RS18745 PF02467 Transcription factor WhiB YIM_RS18755 PF01979 Amidohydrolase family YIM_RS18765 PF02898 Nitric oxide synthase, oxygenase domain YIM_RS18785 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS18790 PF07690 Major Facilitator Superfamily YIM_RS18795 PF00795 Carbon-nitrogen hydrolase YIM_RS18805 PF13466 STAS domain YIM_RS18805 PF13581 Histidine kinase-like ATPase domain YIM_RS18805 PF08448 PAS fold YIM_RS18805 PF07228 Stage II sporulation protein E (SpoIIE) YIM_RS18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS18810 PF00072 Response regulator receiver domain YIM_RS18810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YIM_RS18810 PF01627 Hpt domain YIM_RS18810 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS18810 PF00672 HAMP domain YIM_RS18815 PF01740 STAS domain YIM_RS18840 PF08442 ATP-grasp domain YIM_RS18840 PF00549 CoA-ligase YIM_RS18845 PF02629 CoA binding domain YIM_RS18845 PF00549 CoA-ligase YIM_RS18850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS18850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS18855 PF02634 FdhD/NarQ family YIM_RS18860 PF02558 Ketopantoate reductase PanE/ApbA YIM_RS18860 PF08546 Ketopantoate reductase PanE/ApbA C terminal YIM_RS18870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS18870 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS18870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS18875 PF02515 CoA-transferase family III YIM_RS18880 PF13607 Succinyl-CoA ligase like flavodoxin domain YIM_RS18880 PF13380 CoA binding domain YIM_RS18880 PF00583 Acetyltransferase (GNAT) family YIM_RS18895 PF03741 Integral membrane protein TerC family YIM_RS18905 PF07729 FCD domain YIM_RS18905 PF00392 Bacterial regulatory proteins, gntR family YIM_RS18930 PF12838 4Fe-4S dicluster domain YIM_RS18930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YIM_RS18930 PF01568 Molydopterin dinucleotide binding domain YIM_RS18930 PF00384 Molybdopterin oxidoreductase YIM_RS18930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_RS18935 PF00037 4Fe-4S binding domain YIM_RS18935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YIM_RS18935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YIM_RS18945 PF01810 LysE type translocator YIM_RS18980 PF00474 Sodium:solute symporter family YIM_RS18985 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS18985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS18985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS18990 PF01614 Bacterial transcriptional regulator YIM_RS18990 PF09339 IclR helix-turn-helix domain YIM_RS18995 PF00171 Aldehyde dehydrogenase family YIM_RS19020 PF13409 Glutathione S-transferase, N-terminal domain YIM_RS19025 PF10706 Aminoglycoside-2''-adenylyltransferase YIM_RS19030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_RS19040 PF07859 alpha/beta hydrolase fold YIM_RS19050 PF00296 Luciferase-like monooxygenase YIM_RS19055 PF02913 FAD linked oxidases, C-terminal domain YIM_RS19055 PF01565 FAD binding domain YIM_RS19060 PF00440 Bacterial regulatory proteins, tetR family YIM_RS19065 PF00067 Cytochrome P450 YIM_RS19085 PF02595 Glycerate kinase family YIM_RS19090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS19090 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS19090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS19095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS19095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS19100 PF01261 Xylose isomerase-like TIM barrel YIM_RS19110 PF00860 Permease family YIM_RS19115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_RS19120 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS19120 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS19125 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS19125 PF01799 [2Fe-2S] binding domain YIM_RS19130 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS19130 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS19135 PF01014 Uricase YIM_RS19140 PF05651 Putative sugar diacid recognition YIM_RS19140 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS19140 PF17853 GGDEF-like domain YIM_RS19155 PF08362 YcdC-like protein, C-terminal region YIM_RS19155 PF00440 Bacterial regulatory proteins, tetR family YIM_RS19165 PF00196 Bacterial regulatory proteins, luxR family YIM_RS19170 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YIM_RS19170 PF00753 Metallo-beta-lactamase superfamily YIM_RS19170 PF10996 Beta-Casp domain YIM_RS19175 PF00135 Carboxylesterase family YIM_RS19190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS19190 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS19190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS19195 PF03466 LysR substrate binding domain YIM_RS19200 PF13085 2Fe-2S iron-sulfur cluster binding domain YIM_RS19200 PF13183 4Fe-4S dicluster domain YIM_RS19205 PF02910 Fumarate reductase flavoprotein C-term YIM_RS19205 PF00890 FAD binding domain YIM_RS19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS19215 PF03466 LysR substrate binding domain YIM_RS19225 PF02574 Homocysteine S-methyltransferase YIM_RS19230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS19230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS19235 PF03466 LysR substrate binding domain YIM_RS19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS19245 PF01965 DJ-1/PfpI family YIM_RS19250 PF00296 Luciferase-like monooxygenase YIM_RS19290 PF00005 ABC transporter YIM_RS19300 PF04542 Sigma-70 region 2 YIM_RS19300 PF08281 Sigma-70, region 4 YIM_RS19310 PF00072 Response regulator receiver domain YIM_RS19310 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS19325 PF01047 MarR family YIM_RS19345 PF03055 Retinal pigment epithelial membrane protein YIM_RS19370 PF07690 Major Facilitator Superfamily YIM_RS19390 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_RS19390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_RS19395 PF00355 Rieske [2Fe-2S] domain YIM_RS19410 PF04539 Sigma-70 region 3 YIM_RS19410 PF04542 Sigma-70 region 2 YIM_RS19410 PF04545 Sigma-70, region 4 YIM_RS19420 PF02541 Ppx/GppA phosphatase family YIM_RS19425 PF00156 Phosphoribosyl transferase domain YIM_RS19425 PF05139 Erythromycin esterase YIM_RS19430 PF03073 TspO/MBR family YIM_RS19440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS19440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS19445 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS19445 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS19450 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS19450 PF01799 [2Fe-2S] binding domain YIM_RS19450 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS19455 PF01965 DJ-1/PfpI family YIM_RS19470 PF06965 Na+/H+ antiporter 1 YIM_RS19470 PF13462 Thioredoxin YIM_RS19485 PF00296 Luciferase-like monooxygenase YIM_RS19500 PF07729 FCD domain YIM_RS19500 PF00392 Bacterial regulatory proteins, gntR family YIM_RS19505 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19510 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19535 PF07690 Major Facilitator Superfamily YIM_RS19540 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19545 PF00553 Cellulose binding domain YIM_RS19545 PF00331 Glycosyl hydrolase family 10 YIM_RS19550 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS19550 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS19550 PF14310 Fibronectin type III-like domain YIM_RS19555 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19565 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19590 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain YIM_RS19590 PF04616 Glycosyl hydrolases family 43 YIM_RS19600 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase YIM_RS19605 PF01022 Bacterial regulatory protein, arsR family YIM_RS19610 PF07690 Major Facilitator Superfamily YIM_RS19615 PF02013 Cellulose or protein binding domain YIM_RS19615 PF00150 Cellulase (glycosyl hydrolase family 5) YIM_RS19620 PF00553 Cellulose binding domain YIM_RS19620 PF00041 Fibronectin type III domain YIM_RS19620 PF02011 Glycosyl hydrolase family 48 YIM_RS19625 PF00759 Glycosyl hydrolase family 9 YIM_RS19625 PF00041 Fibronectin type III domain YIM_RS19625 PF00553 Cellulose binding domain YIM_RS19625 PF00942 Cellulose binding domain YIM_RS19635 PF00553 Cellulose binding domain YIM_RS19635 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_RS19640 PF02018 Carbohydrate binding domain YIM_RS19640 PF02927 Cellulase N-terminal ig-like domain YIM_RS19640 PF00759 Glycosyl hydrolase family 9 YIM_RS19645 PF00005 ABC transporter YIM_RS19645 PF17912 MalK OB fold domain YIM_RS19650 PF00232 Glycosyl hydrolase family 1 YIM_RS19655 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19660 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19670 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19680 PF00553 Cellulose binding domain YIM_RS19680 PF00041 Fibronectin type III domain YIM_RS19680 PF01341 Glycosyl hydrolases family 6 YIM_RS19685 PF18416 N-acetylglucosamine binding protein domain 2 YIM_RS19685 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_RS19690 PF00857 Isochorismatase family YIM_RS19700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS19700 PF03466 LysR substrate binding domain YIM_RS19705 PF00232 Glycosyl hydrolase family 1 YIM_RS19710 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19715 PF00553 Cellulose binding domain YIM_RS19715 PF00150 Cellulase (glycosyl hydrolase family 5) YIM_RS19715 PF00041 Fibronectin type III domain YIM_RS19740 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19755 PF12802 MarR family YIM_RS19760 PF04542 Sigma-70 region 2 YIM_RS19760 PF08281 Sigma-70, region 4 YIM_RS19760 PF12680 SnoaL-like domain YIM_RS19770 PF00440 Bacterial regulatory proteins, tetR family YIM_RS19805 PF02447 GntP family permease YIM_RS19815 PF03466 LysR substrate binding domain YIM_RS19815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS19820 PF00083 Sugar (and other) transporter YIM_RS19835 PF00083 Sugar (and other) transporter YIM_RS19835 PF07690 Major Facilitator Superfamily YIM_RS19840 PF13193 AMP-binding enzyme C-terminal domain YIM_RS19840 PF00501 AMP-binding enzyme YIM_RS19860 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS19865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS19870 PF13378 Enolase C-terminal domain-like YIM_RS19870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS19875 PF01232 Mannitol dehydrogenase Rossmann domain YIM_RS19875 PF08125 Mannitol dehydrogenase C-terminal domain YIM_RS19880 PF00107 Zinc-binding dehydrogenase YIM_RS19880 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS19885 PF00083 Sugar (and other) transporter YIM_RS19885 PF07690 Major Facilitator Superfamily YIM_RS19900 PF00356 Bacterial regulatory proteins, lacI family YIM_RS19910 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19915 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS19930 PF07690 Major Facilitator Superfamily YIM_RS19930 PF00083 Sugar (and other) transporter YIM_RS19940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YIM_RS19940 PF08501 Shikimate dehydrogenase substrate binding domain YIM_RS19945 PF01261 Xylose isomerase-like TIM barrel YIM_RS19945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS19970 PF07690 Major Facilitator Superfamily YIM_RS19975 PF00664 ABC transporter transmembrane region YIM_RS19975 PF00005 ABC transporter YIM_RS19980 PF00664 ABC transporter transmembrane region YIM_RS19980 PF00005 ABC transporter YIM_RS19990 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS19995 PF17853 GGDEF-like domain YIM_RS19995 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS20000 PF00293 NUDIX domain YIM_RS20010 PF00067 Cytochrome P450 YIM_RS20015 PF00067 Cytochrome P450 YIM_RS20040 PF00296 Luciferase-like monooxygenase YIM_RS20045 PF04075 F420H(2)-dependent quinone reductase YIM_RS20050 PF12833 Helix-turn-helix domain YIM_RS20050 PF12852 Cupin YIM_RS20055 PF01255 Putative undecaprenyl diphosphate synthase YIM_RS20070 PF04542 Sigma-70 region 2 YIM_RS20070 PF08281 Sigma-70, region 4 YIM_RS20070 PF12680 SnoaL-like domain YIM_RS20085 PF03466 LysR substrate binding domain YIM_RS20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS20135 PF04650 YSIRK type signal peptide YIM_RS20135 PF13088 BNR repeat-like domain YIM_RS20135 PF02973 Sialidase, N-terminal domain YIM_RS20140 PF02449 Beta-galactosidase YIM_RS20140 PF08532 Beta-galactosidase trimerisation domain YIM_RS20140 PF08533 Beta-galactosidase C-terminal domain YIM_RS20145 PF00701 Dihydrodipicolinate synthetase family YIM_RS20150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS20150 PF00005 ABC transporter YIM_RS20155 PF00005 ABC transporter YIM_RS20155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS20160 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS20165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS20170 PF07729 FCD domain YIM_RS20170 PF00392 Bacterial regulatory proteins, gntR family YIM_RS20195 PF03466 LysR substrate binding domain YIM_RS20195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS20205 PF04231 Endonuclease I YIM_RS20210 PF00041 Fibronectin type III domain YIM_RS20210 PF07555 beta-N-acetylglucosaminidase YIM_RS20210 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_RS20210 PF00963 Cohesin domain YIM_RS20210 PF00754 F5/8 type C domain YIM_RS20230 PF04542 Sigma-70 region 2 YIM_RS20230 PF12680 SnoaL-like domain YIM_RS20230 PF08281 Sigma-70, region 4 YIM_RS20250 PF03780 Asp23 family, cell envelope-related function YIM_RS20255 PF01209 ubiE/COQ5 methyltransferase family YIM_RS20265 PF05139 Erythromycin esterase YIM_RS20285 PF00571 CBS domain YIM_RS20285 PF01595 Cyclin M transmembrane N-terminal domain YIM_RS20285 PF03471 Transporter associated domain YIM_RS20290 PF01595 Cyclin M transmembrane N-terminal domain YIM_RS20290 PF03471 Transporter associated domain YIM_RS20290 PF00571 CBS domain YIM_RS20300 PF04616 Glycosyl hydrolases family 43 YIM_RS20315 PF00082 Subtilase family YIM_RS20315 PF05922 Peptidase inhibitor I9 YIM_RS20340 PF00067 Cytochrome P450 YIM_RS20350 PF00196 Bacterial regulatory proteins, luxR family YIM_RS20355 PF00842 Alanine racemase, C-terminal domain YIM_RS20355 PF01168 Alanine racemase, N-terminal domain YIM_RS20360 PF00464 Serine hydroxymethyltransferase YIM_RS20365 PF13193 AMP-binding enzyme C-terminal domain YIM_RS20365 PF00668 Condensation domain YIM_RS20365 PF00550 Phosphopantetheine attachment site YIM_RS20365 PF00975 Thioesterase domain YIM_RS20365 PF00501 AMP-binding enzyme YIM_RS20370 PF00975 Thioesterase domain YIM_RS20370 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS20370 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS20370 PF08242 Methyltransferase domain YIM_RS20370 PF14765 Polyketide synthase dehydratase YIM_RS20370 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS20370 PF00550 Phosphopantetheine attachment site YIM_RS20375 PF00550 Phosphopantetheine attachment site YIM_RS20375 PF13193 AMP-binding enzyme C-terminal domain YIM_RS20375 PF00501 AMP-binding enzyme YIM_RS20375 PF00668 Condensation domain YIM_RS20375 PF00975 Thioesterase domain YIM_RS20385 PF00465 Iron-containing alcohol dehydrogenase YIM_RS20390 PF02779 Transketolase, pyrimidine binding domain YIM_RS20390 PF02780 Transketolase, C-terminal domain YIM_RS20395 PF00465 Iron-containing alcohol dehydrogenase YIM_RS20405 PF02779 Transketolase, pyrimidine binding domain YIM_RS20405 PF02780 Transketolase, C-terminal domain YIM_RS20410 PF00456 Transketolase, thiamine diphosphate binding domain YIM_RS20415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS20420 PF00557 Metallopeptidase family M24 YIM_RS20420 PF01321 Creatinase/Prolidase N-terminal domain YIM_RS20425 PF00171 Aldehyde dehydrogenase family YIM_RS20430 PF13193 AMP-binding enzyme C-terminal domain YIM_RS20430 PF00501 AMP-binding enzyme YIM_RS20440 PF03466 LysR substrate binding domain YIM_RS20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS20445 PF00501 AMP-binding enzyme YIM_RS20445 PF00550 Phosphopantetheine attachment site YIM_RS20445 PF13193 AMP-binding enzyme C-terminal domain YIM_RS20445 PF00668 Condensation domain YIM_RS20445 PF00975 Thioesterase domain YIM_RS20470 PF01022 Bacterial regulatory protein, arsR family YIM_RS20475 PF13411 MerR HTH family regulatory protein YIM_RS20475 PF13152 Protein of unknown function (DUF3967) YIM_RS20480 PF00106 short chain dehydrogenase YIM_RS20485 PF00440 Bacterial regulatory proteins, tetR family YIM_RS20490 PF00893 Small Multidrug Resistance protein YIM_RS20495 PF00893 Small Multidrug Resistance protein YIM_RS20500 PF13404 AsnC-type helix-turn-helix domain YIM_RS20500 PF01037 Lrp/AsnC ligand binding domain YIM_RS20505 PF03806 AbgT putative transporter family YIM_RS20520 PF00857 Isochorismatase family YIM_RS20530 PF00356 Bacterial regulatory proteins, lacI family YIM_RS20535 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS20540 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS20545 PF01547 Bacterial extracellular solute-binding protein YIM_RS20560 PF00294 pfkB family carbohydrate kinase YIM_RS20570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS20570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS20580 PF00296 Luciferase-like monooxygenase YIM_RS20600 PF16350 FAD dependent oxidoreductase central domain YIM_RS20600 PF01571 Aminomethyltransferase folate-binding domain YIM_RS20600 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_RS20600 PF01266 FAD dependent oxidoreductase YIM_RS20610 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS20610 PF04324 BFD-like [2Fe-2S] binding domain YIM_RS20615 PF00701 Dihydrodipicolinate synthetase family YIM_RS20620 PF05544 Proline racemase YIM_RS20630 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS20635 PF00501 AMP-binding enzyme YIM_RS20645 PF00248 Aldo/keto reductase family YIM_RS20650 PF00296 Luciferase-like monooxygenase YIM_RS20655 PF00072 Response regulator receiver domain YIM_RS20655 PF00486 Transcriptional regulatory protein, C terminal YIM_RS20665 PF08031 Berberine and berberine like YIM_RS20665 PF01565 FAD binding domain YIM_RS20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS20670 PF00672 HAMP domain YIM_RS20670 PF07730 Histidine kinase YIM_RS20675 PF00196 Bacterial regulatory proteins, luxR family YIM_RS20675 PF00072 Response regulator receiver domain YIM_RS20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS20680 PF03466 LysR substrate binding domain YIM_RS20685 PF07690 Major Facilitator Superfamily YIM_RS20695 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_RS20710 PF18370 Rhamnogalacturonan I lyases beta-sheet domain YIM_RS20715 PF03960 ArsC family YIM_RS20720 PF00356 Bacterial regulatory proteins, lacI family YIM_RS20725 PF00356 Bacterial regulatory proteins, lacI family YIM_RS20735 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS20740 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS20750 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS20750 PF00440 Bacterial regulatory proteins, tetR family YIM_RS20850 PF08281 Sigma-70, region 4 YIM_RS20850 PF04542 Sigma-70 region 2 YIM_RS20865 PF08241 Methyltransferase domain YIM_RS20870 PF12826 Helix-hairpin-helix motif YIM_RS20870 PF03120 NAD-dependent DNA ligase OB-fold domain YIM_RS20870 PF01653 NAD-dependent DNA ligase adenylation domain YIM_RS20880 PF00561 alpha/beta hydrolase fold YIM_RS20885 PF00196 Bacterial regulatory proteins, luxR family YIM_RS20885 PF00072 Response regulator receiver domain YIM_RS20895 PF00561 alpha/beta hydrolase fold YIM_RS20920 PF07690 Major Facilitator Superfamily YIM_RS20930 PF03466 LysR substrate binding domain YIM_RS20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS20945 PF00487 Fatty acid desaturase YIM_RS20950 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS20950 PF00970 Oxidoreductase FAD-binding domain YIM_RS20950 PF00175 Oxidoreductase NAD-binding domain YIM_RS20960 PF00072 Response regulator receiver domain YIM_RS20960 PF00196 Bacterial regulatory proteins, luxR family YIM_RS20965 PF00392 Bacterial regulatory proteins, gntR family YIM_RS20965 PF07729 FCD domain YIM_RS20970 PF00005 ABC transporter YIM_RS20975 PF00440 Bacterial regulatory proteins, tetR family YIM_RS20980 PF00561 alpha/beta hydrolase fold YIM_RS21000 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS21010 PF00501 AMP-binding enzyme YIM_RS21010 PF13193 AMP-binding enzyme C-terminal domain YIM_RS21035 PF00999 Sodium/hydrogen exchanger family YIM_RS21045 PF01070 FMN-dependent dehydrogenase YIM_RS21050 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS21055 PF13193 AMP-binding enzyme C-terminal domain YIM_RS21055 PF00501 AMP-binding enzyme YIM_RS21065 PF03466 LysR substrate binding domain YIM_RS21065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS21075 PF00392 Bacterial regulatory proteins, gntR family YIM_RS21075 PF07729 FCD domain YIM_RS21120 PF04205 FMN-binding domain YIM_RS21120 PF03358 NADPH-dependent FMN reductase YIM_RS21120 PF00890 FAD binding domain YIM_RS21125 PF07690 Major Facilitator Superfamily YIM_RS21130 PF11975 Family 4 glycosyl hydrolase C-terminal domain YIM_RS21130 PF02056 Family 4 glycosyl hydrolase YIM_RS21135 PF08220 DeoR-like helix-turn-helix domain YIM_RS21135 PF00455 DeoR C terminal sensor domain YIM_RS21140 PF00294 pfkB family carbohydrate kinase YIM_RS21145 PF01547 Bacterial extracellular solute-binding protein YIM_RS21150 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS21155 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS21160 PF02585 GlcNAc-PI de-N-acetylase YIM_RS21170 PF00072 Response regulator receiver domain YIM_RS21170 PF00196 Bacterial regulatory proteins, luxR family YIM_RS21180 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YIM_RS21180 PF01266 FAD dependent oxidoreductase YIM_RS21185 PF03806 AbgT putative transporter family YIM_RS21190 PF00672 HAMP domain YIM_RS21190 PF07228 Stage II sporulation protein E (SpoIIE) YIM_RS21210 PF17853 GGDEF-like domain YIM_RS21210 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS21225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_RS21230 PF00106 short chain dehydrogenase YIM_RS21235 PF01965 DJ-1/PfpI family YIM_RS21240 PF12833 Helix-turn-helix domain YIM_RS21240 PF01965 DJ-1/PfpI family YIM_RS21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS21250 PF03466 LysR substrate binding domain YIM_RS21255 PF00795 Carbon-nitrogen hydrolase YIM_RS21265 PF00815 Histidinol dehydrogenase YIM_RS21270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS21270 PF03466 LysR substrate binding domain YIM_RS21275 PF00005 ABC transporter YIM_RS21275 PF17912 MalK OB fold domain YIM_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS21295 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS21300 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS21310 PF00815 Histidinol dehydrogenase YIM_RS21325 PF00356 Bacterial regulatory proteins, lacI family YIM_RS21340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS21345 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YIM_RS21345 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YIM_RS21345 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YIM_RS21365 PF13537 Glutamine amidotransferase domain YIM_RS21365 PF00733 Asparagine synthase YIM_RS21370 PF00107 Zinc-binding dehydrogenase YIM_RS21390 PF00534 Glycosyl transferases group 1 YIM_RS21390 PF13439 Glycosyltransferase Family 4 YIM_RS21405 PF00202 Aminotransferase class-III YIM_RS21410 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_RS21420 PF00535 Glycosyl transferase family 2 YIM_RS21430 PF16221 winged helix-turn-helix YIM_RS21430 PF16254 Domain of unknown function (DUF4910) YIM_RS21430 PF09940 Domain of unknown function (DUF2172) YIM_RS21435 PF16363 GDP-mannose 4,6 dehydratase YIM_RS21445 PF00483 Nucleotidyl transferase YIM_RS21450 PF08421 Putative zinc binding domain YIM_RS21450 PF08484 C-methyltransferase C-terminal domain YIM_RS21455 PF00171 Aldehyde dehydrogenase family YIM_RS21460 PF05199 GMC oxidoreductase YIM_RS21460 PF00732 GMC oxidoreductase YIM_RS21465 PF07687 Peptidase dimerisation domain YIM_RS21465 PF01546 Peptidase family M20/M25/M40 YIM_RS21500 PF02467 Transcription factor WhiB YIM_RS21565 PF04545 Sigma-70, region 4 YIM_RS21565 PF04539 Sigma-70 region 3 YIM_RS21565 PF04542 Sigma-70 region 2 YIM_RS21565 PF00140 Sigma-70 factor, region 1.2 YIM_RS21575 PF00145 C-5 cytosine-specific DNA methylase YIM_RS21600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS21605 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YIM_RS21605 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YIM_RS21605 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YIM_RS21610 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS21610 PF14759 Reductase C-terminal YIM_RS21615 PF00067 Cytochrome P450 YIM_RS21630 PF00561 alpha/beta hydrolase fold YIM_RS21635 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS21640 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS21640 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS21645 PF00005 ABC transporter YIM_RS21645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS21650 PF00005 ABC transporter YIM_RS21650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS21660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS21660 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS21660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS21665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS21665 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS21665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS21675 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS21685 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS21690 PF00106 short chain dehydrogenase YIM_RS21700 PF00501 AMP-binding enzyme YIM_RS21700 PF14535 AMP-binding enzyme C-terminal domain YIM_RS21705 PF13193 AMP-binding enzyme C-terminal domain YIM_RS21705 PF00501 AMP-binding enzyme YIM_RS21715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS21715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS21715 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS21730 PF01575 MaoC like domain YIM_RS21735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS21735 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS21735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS21740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS21740 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS21740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS21745 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS21750 PF02515 CoA-transferase family III YIM_RS21755 PF13193 AMP-binding enzyme C-terminal domain YIM_RS21755 PF00501 AMP-binding enzyme YIM_RS21760 PF00501 AMP-binding enzyme YIM_RS21760 PF13193 AMP-binding enzyme C-terminal domain YIM_RS21765 PF00732 GMC oxidoreductase YIM_RS21765 PF05199 GMC oxidoreductase YIM_RS21770 PF00171 Aldehyde dehydrogenase family YIM_RS21775 PF00067 Cytochrome P450 YIM_RS21790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS21795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS21805 PF02803 Thiolase, C-terminal domain YIM_RS21805 PF00108 Thiolase, N-terminal domain YIM_RS21810 PF00248 Aldo/keto reductase family YIM_RS21815 PF02515 CoA-transferase family III YIM_RS21820 PF07729 FCD domain YIM_RS21820 PF00392 Bacterial regulatory proteins, gntR family YIM_RS21835 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS21835 PF14759 Reductase C-terminal YIM_RS21845 PF00037 4Fe-4S binding domain YIM_RS21855 PF00171 Aldehyde dehydrogenase family YIM_RS21860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS21865 PF01799 [2Fe-2S] binding domain YIM_RS21865 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS21870 PF00067 Cytochrome P450 YIM_RS21875 PF00171 Aldehyde dehydrogenase family YIM_RS21880 PF14759 Reductase C-terminal YIM_RS21880 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS21890 PF12697 Alpha/beta hydrolase family YIM_RS21905 PF17934 Tetracyclin repressor-like, C-terminal domain YIM_RS21905 PF00440 Bacterial regulatory proteins, tetR family YIM_RS21940 PF08531 Alpha-L-rhamnosidase N-terminal domain YIM_RS21940 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain YIM_RS21940 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain YIM_RS21940 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain YIM_RS21950 PF14310 Fibronectin type III-like domain YIM_RS21950 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS21950 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS21955 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain YIM_RS21955 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain YIM_RS21955 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain YIM_RS21955 PF08531 Alpha-L-rhamnosidase N-terminal domain YIM_RS21975 PF00248 Aldo/keto reductase family YIM_RS21980 PF00753 Metallo-beta-lactamase superfamily YIM_RS22000 PF00067 Cytochrome P450 YIM_RS22005 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS22005 PF00440 Bacterial regulatory proteins, tetR family YIM_RS22015 PF00106 short chain dehydrogenase YIM_RS22030 PF12146 Serine aminopeptidase, S33 YIM_RS22035 PF00106 short chain dehydrogenase YIM_RS22040 PF12833 Helix-turn-helix domain YIM_RS22040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YIM_RS22055 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS22060 PF00171 Aldehyde dehydrogenase family YIM_RS22065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS22065 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS22065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS22075 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS22085 PF02797 Chalcone and stilbene synthases, C-terminal domain YIM_RS22085 PF00195 Chalcone and stilbene synthases, N-terminal domain YIM_RS22090 PF00582 Universal stress protein family YIM_RS22095 PF00571 CBS domain YIM_RS22095 PF01743 Poly A polymerase head domain YIM_RS22100 PF00582 Universal stress protein family YIM_RS22105 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YIM_RS22105 PF09364 XFP N-terminal domain YIM_RS22105 PF09363 XFP C-terminal domain YIM_RS22110 PF13380 CoA binding domain YIM_RS22110 PF13607 Succinyl-CoA ligase like flavodoxin domain YIM_RS22115 PF00871 Acetokinase family YIM_RS22120 PF00582 Universal stress protein family YIM_RS22125 PF00689 Cation transporting ATPase, C-terminus YIM_RS22125 PF00690 Cation transporter/ATPase, N-terminus YIM_RS22130 PF00196 Bacterial regulatory proteins, luxR family YIM_RS22130 PF00072 Response regulator receiver domain YIM_RS22150 PF00582 Universal stress protein family YIM_RS22155 PF00582 Universal stress protein family YIM_RS22160 PF08940 Domain of unknown function (DUF1918) YIM_RS22170 PF12900 Pyridoxamine 5'-phosphate oxidase YIM_RS22175 PF07690 Major Facilitator Superfamily YIM_RS22180 PF01568 Molydopterin dinucleotide binding domain YIM_RS22180 PF00384 Molybdopterin oxidoreductase YIM_RS22185 PF13247 4Fe-4S dicluster domain YIM_RS22185 PF14711 Respiratory nitrate reductase beta C-terminal YIM_RS22195 PF02665 Nitrate reductase gamma subunit YIM_RS22195 PF02613 Nitrate reductase delta subunit YIM_RS22195 PF00384 Molybdopterin oxidoreductase YIM_RS22225 PF03795 YCII-related domain YIM_RS22230 PF08281 Sigma-70, region 4 YIM_RS22230 PF04542 Sigma-70 region 2 YIM_RS22240 PF07690 Major Facilitator Superfamily YIM_RS22245 PF00248 Aldo/keto reductase family YIM_RS22265 PF01494 FAD binding domain YIM_RS22270 PF17754 MftR C-terminal domain YIM_RS22270 PF00440 Bacterial regulatory proteins, tetR family YIM_RS22275 PF14765 Polyketide synthase dehydratase YIM_RS22275 PF00550 Phosphopantetheine attachment site YIM_RS22275 PF08990 Erythronolide synthase docking YIM_RS22275 PF08659 KR domain YIM_RS22275 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS22275 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS22275 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS22275 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS22275 PF00698 Acyl transferase domain YIM_RS22280 PF01266 FAD dependent oxidoreductase YIM_RS22280 PF05690 Thiazole biosynthesis protein ThiG YIM_RS22290 PF09278 MerR, DNA binding YIM_RS22290 PF00376 MerR family regulatory protein YIM_RS22320 PF00331 Glycosyl hydrolase family 10 YIM_RS22390 PF07690 Major Facilitator Superfamily YIM_RS22395 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS22410 PF07690 Major Facilitator Superfamily YIM_RS22425 PF02583 Metal-sensitive transcriptional repressor YIM_RS22435 PF00403 Heavy-metal-associated domain YIM_RS22475 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS22475 PF01799 [2Fe-2S] binding domain YIM_RS22475 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS22480 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS22480 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS22485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS22485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS22490 PF00356 Bacterial regulatory proteins, lacI family YIM_RS22495 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS22500 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS22510 PF06964 Alpha-L-arabinofuranosidase C-terminal domain YIM_RS22515 PF01301 Glycosyl hydrolases family 35 YIM_RS22545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS22545 PF03466 LysR substrate binding domain YIM_RS22550 PF02515 CoA-transferase family III YIM_RS22555 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS22560 PF06314 Acetoacetate decarboxylase (ADC) YIM_RS22565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS22565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS22570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS22570 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS22570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS22585 PF00483 Nucleotidyl transferase YIM_RS22605 PF07730 Histidine kinase YIM_RS22625 PF00221 Aromatic amino acid lyase YIM_RS22630 PF00664 ABC transporter transmembrane region YIM_RS22630 PF00005 ABC transporter YIM_RS22635 PF05711 Macrocin-O-methyltransferase (TylF) YIM_RS22640 PF06722 Protein of unknown function (DUF1205) YIM_RS22645 PF06722 Protein of unknown function (DUF1205) YIM_RS22650 PF00999 Sodium/hydrogen exchanger family YIM_RS22655 PF01613 Flavin reductase like domain YIM_RS22660 PF04820 Tryptophan halogenase YIM_RS22665 PF08484 C-methyltransferase C-terminal domain YIM_RS22665 PF08421 Putative zinc binding domain YIM_RS22670 PF06722 Protein of unknown function (DUF1205) YIM_RS22680 PF01494 FAD binding domain YIM_RS22685 PF06722 Protein of unknown function (DUF1205) YIM_RS22690 PF13649 Methyltransferase domain YIM_RS22700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS22705 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_RS22710 PF03559 NDP-hexose 2,3-dehydratase YIM_RS22715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS22730 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS22740 PF03621 MbtH-like protein YIM_RS22745 PF00501 AMP-binding enzyme YIM_RS22745 PF13193 AMP-binding enzyme C-terminal domain YIM_RS22745 PF00668 Condensation domain YIM_RS22745 PF00550 Phosphopantetheine attachment site YIM_RS22745 PF00975 Thioesterase domain YIM_RS22750 PF13193 AMP-binding enzyme C-terminal domain YIM_RS22750 PF00550 Phosphopantetheine attachment site YIM_RS22750 PF00668 Condensation domain YIM_RS22750 PF00501 AMP-binding enzyme YIM_RS22750 PF00975 Thioesterase domain YIM_RS22755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_RS22755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_RS22760 PF00072 Response regulator receiver domain YIM_RS22760 PF00196 Bacterial regulatory proteins, luxR family YIM_RS22765 PF13649 Methyltransferase domain YIM_RS22770 PF00155 Aminotransferase class I and II YIM_RS22790 PF03965 Penicillinase repressor YIM_RS22795 PF08239 Bacterial SH3 domain YIM_RS22795 PF01476 LysM domain YIM_RS22795 PF00877 NlpC/P60 family YIM_RS22800 PF13185 GAF domain YIM_RS22800 PF00196 Bacterial regulatory proteins, luxR family YIM_RS22805 PF07690 Major Facilitator Superfamily YIM_RS22805 PF00083 Sugar (and other) transporter YIM_RS22810 PF13193 AMP-binding enzyme C-terminal domain YIM_RS22810 PF00501 AMP-binding enzyme YIM_RS22820 PF00083 Sugar (and other) transporter YIM_RS22830 PF01266 FAD dependent oxidoreductase YIM_RS22840 PF00440 Bacterial regulatory proteins, tetR family YIM_RS22845 PF00248 Aldo/keto reductase family YIM_RS22860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS22860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS22870 PF00881 Nitroreductase family YIM_RS22875 PF00486 Transcriptional regulatory protein, C terminal YIM_RS22880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS22880 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS22885 PF00425 chorismate binding enzyme YIM_RS22890 PF00891 O-methyltransferase domain YIM_RS22905 PF01494 FAD binding domain YIM_RS22915 PF04444 Catechol dioxygenase N terminus YIM_RS22915 PF00775 Dioxygenase YIM_RS22920 PF00465 Iron-containing alcohol dehydrogenase YIM_RS22930 PF00171 Aldehyde dehydrogenase family YIM_RS22935 PF00083 Sugar (and other) transporter YIM_RS22945 PF00196 Bacterial regulatory proteins, luxR family YIM_RS22945 PF00072 Response regulator receiver domain YIM_RS22950 PF00202 Aminotransferase class-III YIM_RS22955 PF01425 Amidase YIM_RS22965 PF01613 Flavin reductase like domain YIM_RS22970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS22970 PF13188 PAS domain YIM_RS22970 PF13426 PAS domain YIM_RS22975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS22985 PF00355 Rieske [2Fe-2S] domain YIM_RS22985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YIM_RS23000 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS23000 PF00175 Oxidoreductase NAD-binding domain YIM_RS23010 PF01425 Amidase YIM_RS23015 PF00005 ABC transporter YIM_RS23020 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_RS23020 PF00005 ABC transporter YIM_RS23055 PF03786 D-mannonate dehydratase (UxuA) YIM_RS23065 PF07690 Major Facilitator Superfamily YIM_RS23075 PF01494 FAD binding domain YIM_RS23080 PF06445 GyrI-like small molecule binding domain YIM_RS23080 PF13411 MerR HTH family regulatory protein YIM_RS23085 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS23085 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS23090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS23100 PF12146 Serine aminopeptidase, S33 YIM_RS23105 PF03466 LysR substrate binding domain YIM_RS23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS23110 PF00857 Isochorismatase family YIM_RS23115 PF00296 Luciferase-like monooxygenase YIM_RS23130 PF00330 Aconitase family (aconitate hydratase) YIM_RS23150 PF00069 Protein kinase domain YIM_RS23150 PF01436 NHL repeat YIM_RS23150 PF08450 SMP-30/Gluconolactonase/LRE-like region YIM_RS23195 PF00931 NB-ARC domain YIM_RS23195 PF03704 Bacterial transcriptional activator domain YIM_RS23195 PF00486 Transcriptional regulatory protein, C terminal YIM_RS23200 PF01272 Transcription elongation factor, GreA/GreB, C-term YIM_RS23200 PF03449 Transcription elongation factor, N-terminal YIM_RS23205 PF01266 FAD dependent oxidoreductase YIM_RS23215 PF00440 Bacterial regulatory proteins, tetR family YIM_RS23225 PF01546 Peptidase family M20/M25/M40 YIM_RS23230 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS23230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS23230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS23235 PF00083 Sugar (and other) transporter YIM_RS23235 PF07690 Major Facilitator Superfamily YIM_RS23245 PF01546 Peptidase family M20/M25/M40 YIM_RS23245 PF07687 Peptidase dimerisation domain YIM_RS23250 PF00196 Bacterial regulatory proteins, luxR family YIM_RS23255 PF13649 Methyltransferase domain YIM_RS23260 PF00313 'Cold-shock' DNA-binding domain YIM_RS23265 PF00392 Bacterial regulatory proteins, gntR family YIM_RS23265 PF07729 FCD domain YIM_RS23275 PF08402 TOBE domain YIM_RS23275 PF00005 ABC transporter YIM_RS23290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS23290 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS23290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS23295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS23295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS23295 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS23305 PF13380 CoA binding domain YIM_RS23305 PF13607 Succinyl-CoA ligase like flavodoxin domain YIM_RS23310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS23310 PF13378 Enolase C-terminal domain-like YIM_RS23315 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS23340 PF00331 Glycosyl hydrolase family 10 YIM_RS23340 PF00652 Ricin-type beta-trefoil lectin domain YIM_RS23360 PF03422 Carbohydrate binding module (family 6) YIM_RS23360 PF00457 Glycosyl hydrolases family 11 YIM_RS23370 PF00106 short chain dehydrogenase YIM_RS23375 PF00440 Bacterial regulatory proteins, tetR family YIM_RS23375 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_RS23390 PF00011 Hsp20/alpha crystallin family YIM_RS23400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS23400 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS23400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS23405 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain YIM_RS23405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS23405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS23410 PF01144 Coenzyme A transferase YIM_RS23415 PF01144 Coenzyme A transferase YIM_RS23420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS23420 PF03466 LysR substrate binding domain YIM_RS23425 PF07690 Major Facilitator Superfamily YIM_RS23425 PF00083 Sugar (and other) transporter YIM_RS23430 PF00156 Phosphoribosyl transferase domain YIM_RS23430 PF01738 Dienelactone hydrolase family YIM_RS23445 PF03631 Virulence factor BrkB YIM_RS23475 PF00067 Cytochrome P450 YIM_RS23490 PF00202 Aminotransferase class-III YIM_RS23490 PF00550 Phosphopantetheine attachment site YIM_RS23490 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS23490 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS23490 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS23490 PF00668 Condensation domain YIM_RS23490 PF13193 AMP-binding enzyme C-terminal domain YIM_RS23490 PF00501 AMP-binding enzyme YIM_RS23510 PF07993 Male sterility protein YIM_RS23510 PF00550 Phosphopantetheine attachment site YIM_RS23510 PF00668 Condensation domain YIM_RS23510 PF00501 AMP-binding enzyme YIM_RS23510 PF13193 AMP-binding enzyme C-terminal domain YIM_RS23515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_RS23515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_RS23530 PF00202 Aminotransferase class-III YIM_RS23545 PF00550 Phosphopantetheine attachment site YIM_RS23550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_RS23550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_RS23555 PF13452 N-terminal half of MaoC dehydratase YIM_RS23590 PF03466 LysR substrate binding domain YIM_RS23590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS23595 PF07690 Major Facilitator Superfamily YIM_RS23605 PF12706 Beta-lactamase superfamily domain YIM_RS23615 PF01022 Bacterial regulatory protein, arsR family YIM_RS23630 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS23635 PF00582 Universal stress protein family YIM_RS23645 PF00571 CBS domain YIM_RS23645 PF03448 MgtE intracellular N domain YIM_RS23645 PF01769 Divalent cation transporter YIM_RS23650 PF00582 Universal stress protein family YIM_RS23655 PF00072 Response regulator receiver domain YIM_RS23655 PF00196 Bacterial regulatory proteins, luxR family YIM_RS23665 PF13185 GAF domain YIM_RS23665 PF13492 GAF domain YIM_RS23665 PF07730 Histidine kinase YIM_RS23665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS23700 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_RS23700 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_RS23705 PF07690 Major Facilitator Superfamily YIM_RS23720 PF02515 CoA-transferase family III YIM_RS23730 PF00005 ABC transporter YIM_RS23735 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS23750 PF00171 Aldehyde dehydrogenase family YIM_RS23755 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS23760 PF13193 AMP-binding enzyme C-terminal domain YIM_RS23760 PF00501 AMP-binding enzyme YIM_RS23765 PF01047 MarR family YIM_RS23770 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS23770 PF13291 ACT domain YIM_RS23775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS23775 PF03466 LysR substrate binding domain YIM_RS23785 PF02627 Carboxymuconolactone decarboxylase family YIM_RS23790 PF00931 NB-ARC domain YIM_RS23790 PF00486 Transcriptional regulatory protein, C terminal YIM_RS23790 PF03704 Bacterial transcriptional activator domain YIM_RS23810 PF08329 Chitinase A, N-terminal domain YIM_RS23810 PF00704 Glycosyl hydrolases family 18 YIM_RS23815 PF02311 AraC-like ligand binding domain YIM_RS23815 PF12833 Helix-turn-helix domain YIM_RS23820 PF07690 Major Facilitator Superfamily YIM_RS23830 PF00970 Oxidoreductase FAD-binding domain YIM_RS23830 PF00042 Globin YIM_RS23830 PF00175 Oxidoreductase NAD-binding domain YIM_RS23840 PF00296 Luciferase-like monooxygenase YIM_RS23865 PF01475 Ferric uptake regulator family YIM_RS23870 PF00141 Peroxidase YIM_RS23885 PF07730 Histidine kinase YIM_RS23885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS23885 PF00672 HAMP domain YIM_RS23890 PF00196 Bacterial regulatory proteins, luxR family YIM_RS23890 PF00072 Response regulator receiver domain YIM_RS23895 PF07969 Amidohydrolase family YIM_RS23900 PF07690 Major Facilitator Superfamily YIM_RS23905 PF00067 Cytochrome P450 YIM_RS23910 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS23920 PF00355 Rieske [2Fe-2S] domain YIM_RS23925 PF09339 IclR helix-turn-helix domain YIM_RS23925 PF01614 Bacterial transcriptional regulator YIM_RS23950 PF00582 Universal stress protein family YIM_RS23955 PF00582 Universal stress protein family YIM_RS23985 PF00106 short chain dehydrogenase YIM_RS23990 PF00296 Luciferase-like monooxygenase YIM_RS24000 PF01638 HxlR-like helix-turn-helix YIM_RS24005 PF01380 SIS domain YIM_RS24010 PF00294 pfkB family carbohydrate kinase YIM_RS24015 PF01116 Fructose-bisphosphate aldolase class-II YIM_RS24020 PF08220 DeoR-like helix-turn-helix domain YIM_RS24020 PF00455 DeoR C terminal sensor domain YIM_RS24030 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS24035 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS24040 PF17912 MalK OB fold domain YIM_RS24040 PF00005 ABC transporter YIM_RS24050 PF08220 DeoR-like helix-turn-helix domain YIM_RS24050 PF00455 DeoR C terminal sensor domain YIM_RS24055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS24070 PF00171 Aldehyde dehydrogenase family YIM_RS24075 PF01619 Proline dehydrogenase YIM_RS24090 PF00248 Aldo/keto reductase family YIM_RS24095 PF00296 Luciferase-like monooxygenase YIM_RS24100 PF02673 Bacitracin resistance protein BacA YIM_RS24110 PF01432 Peptidase family M3 YIM_RS24125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YIM_RS24125 PF00056 lactate/malate dehydrogenase, NAD binding domain YIM_RS24140 PF17678 Glycosyl hydrolase family 92 N-terminal domain YIM_RS24140 PF07971 Glycosyl hydrolase family 92 YIM_RS24145 PF07687 Peptidase dimerisation domain YIM_RS24145 PF01546 Peptidase family M20/M25/M40 YIM_RS24155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS24160 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS24165 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS24165 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS24170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS24170 PF00005 ABC transporter YIM_RS24195 PF02016 LD-carboxypeptidase N-terminal domain YIM_RS24195 PF17676 LD-carboxypeptidase C-terminal domain YIM_RS24220 PF12706 Beta-lactamase superfamily domain YIM_RS24235 PF00440 Bacterial regulatory proteins, tetR family YIM_RS24250 PF01145 SPFH domain / Band 7 family YIM_RS24260 PF00440 Bacterial regulatory proteins, tetR family YIM_RS24260 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS24290 PF07690 Major Facilitator Superfamily YIM_RS24295 PF03358 NADPH-dependent FMN reductase YIM_RS24305 PF13460 NAD(P)H-binding YIM_RS24310 PF00005 ABC transporter YIM_RS24310 PF17755 UvrA DNA-binding domain YIM_RS24310 PF17760 UvrA interaction domain YIM_RS24320 PF04542 Sigma-70 region 2 YIM_RS24320 PF08281 Sigma-70, region 4 YIM_RS24325 PF00248 Aldo/keto reductase family YIM_RS24350 PF12833 Helix-turn-helix domain YIM_RS24350 PF12852 Cupin YIM_RS24360 PF06441 Epoxide hydrolase N terminus YIM_RS24370 PF12419 SNF2 Helicase protein YIM_RS24370 PF00271 Helicase conserved C-terminal domain YIM_RS24370 PF00176 SNF2 family N-terminal domain YIM_RS24385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_RS24395 PF01037 Lrp/AsnC ligand binding domain YIM_RS24410 PF00795 Carbon-nitrogen hydrolase YIM_RS24415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS24415 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS24415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS24420 PF02899 Phage integrase, N-terminal SAM-like domain YIM_RS24420 PF00589 Phage integrase family YIM_RS24430 PF00072 Response regulator receiver domain YIM_RS24430 PF00196 Bacterial regulatory proteins, luxR family YIM_RS24435 PF07730 Histidine kinase YIM_RS24450 PF13360 PQQ-like domain YIM_RS24450 PF00069 Protein kinase domain YIM_RS24455 PF13360 PQQ-like domain YIM_RS24455 PF00069 Protein kinase domain YIM_RS24460 PF08281 Sigma-70, region 4 YIM_RS24460 PF04542 Sigma-70 region 2 YIM_RS24460 PF12680 SnoaL-like domain YIM_RS24465 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS24490 PF00400 WD domain, G-beta repeat YIM_RS24490 PF12894 Anaphase-promoting complex subunit 4 WD40 domain YIM_RS24525 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS24525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS24525 PF00672 HAMP domain YIM_RS24530 PF00486 Transcriptional regulatory protein, C terminal YIM_RS24530 PF00072 Response regulator receiver domain YIM_RS24560 PF00106 short chain dehydrogenase YIM_RS24575 PF00392 Bacterial regulatory proteins, gntR family YIM_RS24580 PF00005 ABC transporter YIM_RS24595 PF01022 Bacterial regulatory protein, arsR family YIM_RS24600 PF00561 alpha/beta hydrolase fold YIM_RS24605 PF13460 NAD(P)H-binding YIM_RS24610 PF01638 HxlR-like helix-turn-helix YIM_RS24625 PF08281 Sigma-70, region 4 YIM_RS24625 PF04542 Sigma-70 region 2 YIM_RS24630 PF03795 YCII-related domain YIM_RS24650 PF01494 FAD binding domain YIM_RS24660 PF01370 NAD dependent epimerase/dehydratase family YIM_RS24665 PF00440 Bacterial regulatory proteins, tetR family YIM_RS24670 PF07690 Major Facilitator Superfamily YIM_RS24680 PF08281 Sigma-70, region 4 YIM_RS24680 PF04542 Sigma-70 region 2 YIM_RS24685 PF03795 YCII-related domain YIM_RS24690 PF00561 alpha/beta hydrolase fold YIM_RS24710 PF13649 Methyltransferase domain YIM_RS24710 PF17827 PrmC N-terminal domain YIM_RS24715 PF13649 Methyltransferase domain YIM_RS24770 PF02899 Phage integrase, N-terminal SAM-like domain YIM_RS24770 PF00589 Phage integrase family YIM_RS24800 PF00561 alpha/beta hydrolase fold YIM_RS24805 PF00440 Bacterial regulatory proteins, tetR family YIM_RS24805 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS24820 PF00265 Thymidine kinase YIM_RS24825 PF13397 RNA polymerase-binding protein YIM_RS24830 PF00484 Carbonic anhydrase YIM_RS24835 PF00535 Glycosyl transferase family 2 YIM_RS24840 PF00795 Carbon-nitrogen hydrolase YIM_RS24840 PF00535 Glycosyl transferase family 2 YIM_RS24845 PF01979 Amidohydrolase family YIM_RS24850 PF04055 Radical SAM superfamily YIM_RS24850 PF12544 Lysine-2,3-aminomutase YIM_RS24860 PF02136 Nuclear transport factor 2 (NTF2) domain YIM_RS24880 PF01809 Putative membrane protein insertion efficiency factor YIM_RS24890 PF00550 Phosphopantetheine attachment site YIM_RS24890 PF14765 Polyketide synthase dehydratase YIM_RS24890 PF00698 Acyl transferase domain YIM_RS24890 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS24890 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS24890 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS24890 PF08990 Erythronolide synthase docking YIM_RS24890 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS24890 PF08659 KR domain YIM_RS24895 PF00440 Bacterial regulatory proteins, tetR family YIM_RS24915 PF00733 Asparagine synthase YIM_RS24915 PF13537 Glutamine amidotransferase domain YIM_RS24920 PF01593 Flavin containing amine oxidoreductase YIM_RS24925 PF00486 Transcriptional regulatory protein, C terminal YIM_RS24925 PF00072 Response regulator receiver domain YIM_RS24930 PF01494 FAD binding domain YIM_RS24935 PF00501 AMP-binding enzyme YIM_RS24935 PF00668 Condensation domain YIM_RS24935 PF00550 Phosphopantetheine attachment site YIM_RS24935 PF13193 AMP-binding enzyme C-terminal domain YIM_RS24940 PF00668 Condensation domain YIM_RS24940 PF00550 Phosphopantetheine attachment site YIM_RS24940 PF13193 AMP-binding enzyme C-terminal domain YIM_RS24940 PF00501 AMP-binding enzyme YIM_RS24950 PF00891 O-methyltransferase domain YIM_RS24955 PF03301 Tryptophan 2,3-dioxygenase YIM_RS24960 PF00266 Aminotransferase class-V YIM_RS24985 PF01565 FAD binding domain YIM_RS24985 PF02913 FAD linked oxidases, C-terminal domain YIM_RS24995 PF01596 O-methyltransferase YIM_RS25000 PF00067 Cytochrome P450 YIM_RS25005 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS25005 PF00107 Zinc-binding dehydrogenase YIM_RS25010 PF00171 Aldehyde dehydrogenase family YIM_RS25025 PF07690 Major Facilitator Superfamily YIM_RS25040 PF00005 ABC transporter YIM_RS25040 PF17760 UvrA interaction domain YIM_RS25040 PF17755 UvrA DNA-binding domain YIM_RS25050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS25050 PF03466 LysR substrate binding domain YIM_RS25060 PF07690 Major Facilitator Superfamily YIM_RS25070 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS25070 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS25070 PF00698 Acyl transferase domain YIM_RS25070 PF08659 KR domain YIM_RS25070 PF14765 Polyketide synthase dehydratase YIM_RS25070 PF00550 Phosphopantetheine attachment site YIM_RS25070 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS25080 PF00155 Aminotransferase class I and II YIM_RS25095 PF02687 FtsX-like permease family YIM_RS25095 PF00005 ABC transporter YIM_RS25095 PF12704 MacB-like periplasmic core domain YIM_RS25100 PF00005 ABC transporter YIM_RS25130 PF04978 Protein of unknown function (DUF664) YIM_RS25140 PF00501 AMP-binding enzyme YIM_RS25145 PF03621 MbtH-like protein YIM_RS25150 PF00501 AMP-binding enzyme YIM_RS25150 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS25150 PF00550 Phosphopantetheine attachment site YIM_RS25150 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25150 PF00202 Aminotransferase class-III YIM_RS25150 PF00668 Condensation domain YIM_RS25150 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS25150 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS25160 PF00550 Phosphopantetheine attachment site YIM_RS25160 PF00668 Condensation domain YIM_RS25160 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25160 PF00501 AMP-binding enzyme YIM_RS25165 PF00668 Condensation domain YIM_RS25165 PF00550 Phosphopantetheine attachment site YIM_RS25165 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25165 PF00975 Thioesterase domain YIM_RS25165 PF00501 AMP-binding enzyme YIM_RS25170 PF07690 Major Facilitator Superfamily YIM_RS25180 PF01638 HxlR-like helix-turn-helix YIM_RS25195 PF07690 Major Facilitator Superfamily YIM_RS25210 PF08241 Methyltransferase domain YIM_RS25225 PF08531 Alpha-L-rhamnosidase N-terminal domain YIM_RS25225 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain YIM_RS25225 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain YIM_RS25225 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain YIM_RS25230 PF13302 Acetyltransferase (GNAT) domain YIM_RS25250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS25250 PF03466 LysR substrate binding domain YIM_RS25310 PF03704 Bacterial transcriptional activator domain YIM_RS25310 PF00931 NB-ARC domain YIM_RS25310 PF00486 Transcriptional regulatory protein, C terminal YIM_RS25330 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS25330 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS25335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS25335 PF03466 LysR substrate binding domain YIM_RS25350 PF12697 Alpha/beta hydrolase family YIM_RS25360 PF04978 Protein of unknown function (DUF664) YIM_RS25370 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_RS25370 PF00440 Bacterial regulatory proteins, tetR family YIM_RS25385 PF00551 Formyl transferase YIM_RS25390 PF03313 Serine dehydratase alpha chain YIM_RS25390 PF03315 Serine dehydratase beta chain YIM_RS25395 PF07729 FCD domain YIM_RS25395 PF00392 Bacterial regulatory proteins, gntR family YIM_RS25400 PF01571 Aminomethyltransferase folate-binding domain YIM_RS25400 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_RS25400 PF01266 FAD dependent oxidoreductase YIM_RS25400 PF16350 FAD dependent oxidoreductase central domain YIM_RS25410 PF17806 Sarcosine oxidase A3 domain YIM_RS25410 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_RS25410 PF01571 Aminomethyltransferase folate-binding domain YIM_RS25410 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS25415 PF04267 Sarcosine oxidase, delta subunit family YIM_RS25420 PF01266 FAD dependent oxidoreductase YIM_RS25425 PF00464 Serine hydroxymethyltransferase YIM_RS25430 PF00753 Metallo-beta-lactamase superfamily YIM_RS25430 PF16123 Hydroxyacylglutathione hydrolase C-terminus YIM_RS25435 PF00107 Zinc-binding dehydrogenase YIM_RS25435 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS25440 PF00355 Rieske [2Fe-2S] domain YIM_RS25440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YIM_RS25445 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS25445 PF14759 Reductase C-terminal YIM_RS25450 PF00355 Rieske [2Fe-2S] domain YIM_RS25455 PF09339 IclR helix-turn-helix domain YIM_RS25455 PF01614 Bacterial transcriptional regulator YIM_RS25460 PF08946 Osmosensory transporter coiled coil YIM_RS25460 PF00083 Sugar (and other) transporter YIM_RS25495 PF00296 Luciferase-like monooxygenase YIM_RS25510 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS25510 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS25525 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS25525 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS25530 PF00550 Phosphopantetheine attachment site YIM_RS25535 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS25540 PF00196 Bacterial regulatory proteins, luxR family YIM_RS25545 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25545 PF00501 AMP-binding enzyme YIM_RS25550 PF00221 Aromatic amino acid lyase YIM_RS25560 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS25560 PF13191 AAA ATPase domain YIM_RS25570 PF00196 Bacterial regulatory proteins, luxR family YIM_RS25580 PF07690 Major Facilitator Superfamily YIM_RS25585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_RS25585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_RS25590 PF00501 AMP-binding enzyme YIM_RS25590 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25590 PF00668 Condensation domain YIM_RS25590 PF00550 Phosphopantetheine attachment site YIM_RS25590 PF00975 Thioesterase domain YIM_RS25595 PF07993 Male sterility protein YIM_RS25595 PF00550 Phosphopantetheine attachment site YIM_RS25595 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25595 PF00668 Condensation domain YIM_RS25595 PF00501 AMP-binding enzyme YIM_RS25600 PF03621 MbtH-like protein YIM_RS25605 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25605 PF00668 Condensation domain YIM_RS25605 PF00550 Phosphopantetheine attachment site YIM_RS25605 PF00501 AMP-binding enzyme YIM_RS25610 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_RS25620 PF08659 KR domain YIM_RS25620 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS25620 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS25620 PF00107 Zinc-binding dehydrogenase YIM_RS25620 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS25620 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS25620 PF00550 Phosphopantetheine attachment site YIM_RS25620 PF00698 Acyl transferase domain YIM_RS25620 PF14765 Polyketide synthase dehydratase YIM_RS25630 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS25650 PF01032 FecCD transport family YIM_RS25660 PF04616 Glycosyl hydrolases family 43 YIM_RS25660 PF16369 C-terminal lipocalin-like domain YIM_RS25670 PF00717 Peptidase S24-like YIM_RS25670 PF01726 LexA DNA binding domain YIM_RS25690 PF00732 GMC oxidoreductase YIM_RS25690 PF05199 GMC oxidoreductase YIM_RS25705 PF07690 Major Facilitator Superfamily YIM_RS25710 PF07859 alpha/beta hydrolase fold YIM_RS25720 PF00196 Bacterial regulatory proteins, luxR family YIM_RS25720 PF00072 Response regulator receiver domain YIM_RS25725 PF07730 Histidine kinase YIM_RS25740 PF06441 Epoxide hydrolase N terminus YIM_RS25790 PF03704 Bacterial transcriptional activator domain YIM_RS25790 PF00931 NB-ARC domain YIM_RS25790 PF00486 Transcriptional regulatory protein, C terminal YIM_RS25795 PF00440 Bacterial regulatory proteins, tetR family YIM_RS25810 PF00793 DAHP synthetase I family YIM_RS25815 PF07690 Major Facilitator Superfamily YIM_RS25820 PF00668 Condensation domain YIM_RS25820 PF00550 Phosphopantetheine attachment site YIM_RS25820 PF00501 AMP-binding enzyme YIM_RS25820 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25825 PF00005 ABC transporter YIM_RS25830 PF01032 FecCD transport family YIM_RS25835 PF01032 FecCD transport family YIM_RS25845 PF08021 Siderophore-interacting FAD-binding domain YIM_RS25845 PF04954 Siderophore-interacting protein YIM_RS25850 PF00857 Isochorismatase family YIM_RS25850 PF00550 Phosphopantetheine attachment site YIM_RS25855 PF00550 Phosphopantetheine attachment site YIM_RS25855 PF00857 Isochorismatase family YIM_RS25860 PF13193 AMP-binding enzyme C-terminal domain YIM_RS25860 PF00501 AMP-binding enzyme YIM_RS25865 PF00425 chorismate binding enzyme YIM_RS25870 PF00106 short chain dehydrogenase YIM_RS25875 PF00561 alpha/beta hydrolase fold YIM_RS25875 PF00364 Biotin-requiring enzyme YIM_RS25885 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_RS25885 PF07724 AAA domain (Cdc48 subfamily) YIM_RS25890 PF00795 Carbon-nitrogen hydrolase YIM_RS25895 PF02293 AmiS/UreI family transporter YIM_RS25915 PF01384 Phosphate transporter family YIM_RS25920 PF00248 Aldo/keto reductase family YIM_RS25930 PF01380 SIS domain YIM_RS25950 PF02913 FAD linked oxidases, C-terminal domain YIM_RS25950 PF01565 FAD binding domain YIM_RS25965 PF00083 Sugar (and other) transporter YIM_RS25965 PF07690 Major Facilitator Superfamily YIM_RS25970 PF01047 MarR family YIM_RS25975 PF03176 MMPL family YIM_RS25985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS25990 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS25990 PF01799 [2Fe-2S] binding domain YIM_RS26015 PF08241 Methyltransferase domain YIM_RS26020 PF01965 DJ-1/PfpI family YIM_RS26025 PF00232 Glycosyl hydrolase family 1 YIM_RS26035 PF01970 Tripartite tricarboxylate transporter TctA family YIM_RS26045 PF03401 Tripartite tricarboxylate transporter family receptor YIM_RS26050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS26050 PF03466 LysR substrate binding domain YIM_RS26055 PF00701 Dihydrodipicolinate synthetase family YIM_RS26060 PF13378 Enolase C-terminal domain-like YIM_RS26060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS26065 PF13378 Enolase C-terminal domain-like YIM_RS26065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS26075 PF03741 Integral membrane protein TerC family YIM_RS26085 PF01494 FAD binding domain YIM_RS26105 PF00155 Aminotransferase class I and II YIM_RS26110 PF00892 EamA-like transporter family YIM_RS26115 PF00701 Dihydrodipicolinate synthetase family YIM_RS26140 PF00005 ABC transporter YIM_RS26160 PF00072 Response regulator receiver domain YIM_RS26160 PF00486 Transcriptional regulatory protein, C terminal YIM_RS26175 PF07005 Sugar-binding N-terminal domain YIM_RS26175 PF17042 Nucleotide-binding C-terminal domain YIM_RS26180 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_RS26185 PF00455 DeoR C terminal sensor domain YIM_RS26185 PF08220 DeoR-like helix-turn-helix domain YIM_RS26200 PF01047 MarR family YIM_RS26220 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_RS26225 PF00756 Putative esterase YIM_RS26225 PF01476 LysM domain YIM_RS26230 PF07690 Major Facilitator Superfamily YIM_RS26235 PF09278 MerR, DNA binding YIM_RS26235 PF00376 MerR family regulatory protein YIM_RS26245 PF07859 alpha/beta hydrolase fold YIM_RS26260 PF05711 Macrocin-O-methyltransferase (TylF) YIM_RS26270 PF04542 Sigma-70 region 2 YIM_RS26270 PF12680 SnoaL-like domain YIM_RS26270 PF08281 Sigma-70, region 4 YIM_RS26280 PF01614 Bacterial transcriptional regulator YIM_RS26280 PF09339 IclR helix-turn-helix domain YIM_RS26285 PF02615 Malate/L-lactate dehydrogenase YIM_RS26290 PF07690 Major Facilitator Superfamily YIM_RS26290 PF00083 Sugar (and other) transporter YIM_RS26295 PF01047 MarR family YIM_RS26300 PF02566 OsmC-like protein YIM_RS26310 PF01810 LysE type translocator YIM_RS26315 PF00457 Glycosyl hydrolases family 11 YIM_RS26320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS26320 PF13378 Enolase C-terminal domain-like YIM_RS26330 PF08450 SMP-30/Gluconolactonase/LRE-like region YIM_RS26335 PF00171 Aldehyde dehydrogenase family YIM_RS26340 PF09339 IclR helix-turn-helix domain YIM_RS26340 PF01614 Bacterial transcriptional regulator YIM_RS26345 PF01263 Aldose 1-epimerase YIM_RS26350 PF04616 Glycosyl hydrolases family 43 YIM_RS26350 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain YIM_RS26355 PF01614 Bacterial transcriptional regulator YIM_RS26355 PF09339 IclR helix-turn-helix domain YIM_RS26360 PF00107 Zinc-binding dehydrogenase YIM_RS26360 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS26365 PF02653 Branched-chain amino acid transport system / permease component YIM_RS26370 PF02653 Branched-chain amino acid transport system / permease component YIM_RS26375 PF00005 ABC transporter YIM_RS26380 PF13407 Periplasmic binding protein domain YIM_RS26385 PF00356 Bacterial regulatory proteins, lacI family YIM_RS26395 PF06964 Alpha-L-arabinofuranosidase C-terminal domain YIM_RS26395 PF02018 Carbohydrate binding domain YIM_RS26400 PF07690 Major Facilitator Superfamily YIM_RS26415 PF00144 Beta-lactamase YIM_RS26420 PF06441 Epoxide hydrolase N terminus YIM_RS26440 PF06689 ClpX C4-type zinc finger YIM_RS26440 PF07724 AAA domain (Cdc48 subfamily) YIM_RS26440 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_RS26450 PF00440 Bacterial regulatory proteins, tetR family YIM_RS26455 PF07690 Major Facilitator Superfamily YIM_RS26475 PF07690 Major Facilitator Superfamily YIM_RS26480 PF01638 HxlR-like helix-turn-helix YIM_RS26485 PF00069 Protein kinase domain YIM_RS26490 PF02515 CoA-transferase family III YIM_RS26495 PF01565 FAD binding domain YIM_RS26495 PF02913 FAD linked oxidases, C-terminal domain YIM_RS26495 PF13183 4Fe-4S dicluster domain YIM_RS26500 PF00266 Aminotransferase class-V YIM_RS26510 PF02463 RecF/RecN/SMC N terminal domain YIM_RS26515 PF04237 YjbR YIM_RS26520 PF00392 Bacterial regulatory proteins, gntR family YIM_RS26520 PF07729 FCD domain YIM_RS26530 PF03600 Citrate transporter YIM_RS26540 PF07730 Histidine kinase YIM_RS26540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS26540 PF05231 MASE1 YIM_RS26545 PF00196 Bacterial regulatory proteins, luxR family YIM_RS26545 PF00072 Response regulator receiver domain YIM_RS26550 PF01757 Acyltransferase family YIM_RS26560 PF04542 Sigma-70 region 2 YIM_RS26560 PF04545 Sigma-70, region 4 YIM_RS26575 PF17755 UvrA DNA-binding domain YIM_RS26575 PF00005 ABC transporter YIM_RS26575 PF17760 UvrA interaction domain YIM_RS26580 PF07739 TipAS antibiotic-recognition domain YIM_RS26580 PF13411 MerR HTH family regulatory protein YIM_RS26595 PF17760 UvrA interaction domain YIM_RS26595 PF17755 UvrA DNA-binding domain YIM_RS26595 PF00005 ABC transporter YIM_RS26615 PF16499 Alpha galactosidase A YIM_RS26615 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_RS26640 PF07977 FabA-like domain YIM_RS26645 PF00550 Phosphopantetheine attachment site YIM_RS26650 PF00289 Biotin carboxylase, N-terminal domain YIM_RS26650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS26650 PF02785 Biotin carboxylase C-terminal domain YIM_RS26655 PF00364 Biotin-requiring enzyme YIM_RS26660 PF17848 Acetyl-coA carboxylase zinc finger domain YIM_RS26660 PF01039 Carboxyl transferase domain YIM_RS26680 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS26680 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS26695 PF08659 KR domain YIM_RS26695 PF00550 Phosphopantetheine attachment site YIM_RS26695 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS26695 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS26695 PF00698 Acyl transferase domain YIM_RS26695 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS26695 PF14765 Polyketide synthase dehydratase YIM_RS26700 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS26700 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS26705 PF00550 Phosphopantetheine attachment site YIM_RS26715 PF07977 FabA-like domain YIM_RS26720 PF07977 FabA-like domain YIM_RS26735 PF00067 Cytochrome P450 YIM_RS26745 PF01494 FAD binding domain YIM_RS26755 PF07690 Major Facilitator Superfamily YIM_RS26760 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS26760 PF00440 Bacterial regulatory proteins, tetR family YIM_RS26770 PF00202 Aminotransferase class-III YIM_RS26775 PF00743 Flavin-binding monooxygenase-like YIM_RS26780 PF13649 Methyltransferase domain YIM_RS26795 PF13192 Thioredoxin domain YIM_RS26795 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS26800 PF01209 ubiE/COQ5 methyltransferase family YIM_RS26810 PF03965 Penicillinase repressor YIM_RS26830 PF00501 AMP-binding enzyme YIM_RS26830 PF13193 AMP-binding enzyme C-terminal domain YIM_RS26830 PF00668 Condensation domain YIM_RS26830 PF00550 Phosphopantetheine attachment site YIM_RS26840 PF00975 Thioesterase domain YIM_RS26850 PF00005 ABC transporter YIM_RS26850 PF13732 Domain of unknown function (DUF4162) YIM_RS26860 PF00501 AMP-binding enzyme YIM_RS26860 PF14535 AMP-binding enzyme C-terminal domain YIM_RS26865 PF00196 Bacterial regulatory proteins, luxR family YIM_RS26865 PF00072 Response regulator receiver domain YIM_RS26870 PF12146 Serine aminopeptidase, S33 YIM_RS26890 PF03781 Sulfatase-modifying factor enzyme 1 YIM_RS26910 PF00296 Luciferase-like monooxygenase YIM_RS26915 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS26915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS26915 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS26920 PF03358 NADPH-dependent FMN reductase YIM_RS26925 PF01638 HxlR-like helix-turn-helix YIM_RS26935 PF03422 Carbohydrate binding module (family 6) YIM_RS26935 PF16990 Carbohydrate binding module (family 35) YIM_RS26935 PF13199 Glycosyl hydrolase family 66 YIM_RS26940 PF01979 Amidohydrolase family YIM_RS26950 PF07690 Major Facilitator Superfamily YIM_RS26960 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS26985 PF01037 Lrp/AsnC ligand binding domain YIM_RS26990 PF01321 Creatinase/Prolidase N-terminal domain YIM_RS26990 PF00557 Metallopeptidase family M24 YIM_RS27005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YIM_RS27005 PF01367 5'-3' exonuclease, C-terminal SAM fold YIM_RS27010 PF13530 Sterol carrier protein domain YIM_RS27010 PF17668 Acetyltransferase (GNAT) domain YIM_RS27020 PF17668 Acetyltransferase (GNAT) domain YIM_RS27020 PF13530 Sterol carrier protein domain YIM_RS27030 PF00271 Helicase conserved C-terminal domain YIM_RS27030 PF08148 DSHCT (NUC185) domain YIM_RS27030 PF00270 DEAD/DEAH box helicase YIM_RS27040 PF00781 Diacylglycerol kinase catalytic domain YIM_RS27045 PF00902 Sec-independent protein translocase protein (TatC) YIM_RS27050 PF02416 mttA/Hcf106 family YIM_RS27060 PF13280 WYL domain YIM_RS27065 PF13280 WYL domain YIM_RS27080 PF03136 Pup-ligase protein YIM_RS27085 PF00781 Diacylglycerol kinase catalytic domain YIM_RS27090 PF00227 Proteasome subunit YIM_RS27095 PF00227 Proteasome subunit YIM_RS27100 PF05639 Pup-like protein YIM_RS27105 PF03136 Pup-ligase protein YIM_RS27110 PF00293 NUDIX domain YIM_RS27125 PF00553 Cellulose binding domain YIM_RS27125 PF00150 Cellulase (glycosyl hydrolase family 5) YIM_RS27140 PF16450 Proteasomal ATPase OB C-terminal domain YIM_RS27140 PF17758 Proteasomal ATPase OB N-terminal domain YIM_RS27140 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS27155 PF08704 tRNA methyltransferase complex GCD14 subunit YIM_RS27160 PF00571 CBS domain YIM_RS27160 PF02163 Peptidase family M50 YIM_RS27175 PF13614 AAA domain YIM_RS27180 PF03547 Membrane transport protein YIM_RS27185 PF08029 HisG, C-terminal domain YIM_RS27185 PF01634 ATP phosphoribosyltransferase YIM_RS27190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YIM_RS27200 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS27205 PF02965 Vitamin B12 dependent methionine synthase, activation domain YIM_RS27205 PF02607 B12 binding domain YIM_RS27205 PF02310 B12 binding domain YIM_RS27205 PF00809 Pterin binding enzyme YIM_RS27205 PF02574 Homocysteine S-methyltransferase YIM_RS27220 PF07690 Major Facilitator Superfamily YIM_RS27225 PF01209 ubiE/COQ5 methyltransferase family YIM_RS27230 PF12695 Alpha/beta hydrolase family YIM_RS27240 PF13193 AMP-binding enzyme C-terminal domain YIM_RS27240 PF00501 AMP-binding enzyme YIM_RS27245 PF00196 Bacterial regulatory proteins, luxR family YIM_RS27255 PF00149 Calcineurin-like phosphoesterase YIM_RS27270 PF00005 ABC transporter YIM_RS27275 PF00005 ABC transporter YIM_RS27280 PF01406 tRNA synthetases class I (C) catalytic domain YIM_RS27285 PF07739 TipAS antibiotic-recognition domain YIM_RS27285 PF13411 MerR HTH family regulatory protein YIM_RS27295 PF00067 Cytochrome P450 YIM_RS27300 PF00082 Subtilase family YIM_RS27300 PF05922 Peptidase inhibitor I9 YIM_RS27315 PF17863 AAA lid domain YIM_RS27315 PF01078 Magnesium chelatase, subunit ChlI YIM_RS27325 PF00149 Calcineurin-like phosphoesterase YIM_RS27335 PF04542 Sigma-70 region 2 YIM_RS27335 PF08281 Sigma-70, region 4 YIM_RS27340 PF00762 Ferrochelatase YIM_RS27345 PF00440 Bacterial regulatory proteins, tetR family YIM_RS27350 PF07690 Major Facilitator Superfamily YIM_RS27370 PF00072 Response regulator receiver domain YIM_RS27370 PF00486 Transcriptional regulatory protein, C terminal YIM_RS27375 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS27375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS27375 PF00672 HAMP domain YIM_RS27390 PF00588 SpoU rRNA Methylase family YIM_RS27395 PF01494 FAD binding domain YIM_RS27405 PF07584 Aerotolerance regulator N-terminal YIM_RS27405 PF00092 von Willebrand factor type A domain YIM_RS27410 PF01882 Protein of unknown function DUF58 YIM_RS27415 PF17863 AAA lid domain YIM_RS27415 PF07726 ATPase family associated with various cellular activities (AAA) YIM_RS27420 PF12804 MobA-like NTP transferase domain YIM_RS27430 PF00877 NlpC/P60 family YIM_RS27445 PF00694 Aconitase C-terminal domain YIM_RS27445 PF00330 Aconitase family (aconitate hydratase) YIM_RS27450 PF02308 MgtC family YIM_RS27455 PF00561 alpha/beta hydrolase fold YIM_RS27460 PF10017 Histidine-specific methyltransferase, SAM-dependent YIM_RS27470 PF12867 DinB superfamily YIM_RS27470 PF03781 Sulfatase-modifying factor enzyme 1 YIM_RS27475 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_RS27480 PF03466 LysR substrate binding domain YIM_RS27480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS27485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YIM_RS27485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YIM_RS27510 PF00440 Bacterial regulatory proteins, tetR family YIM_RS27515 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_RS27520 PF01595 Cyclin M transmembrane N-terminal domain YIM_RS27520 PF00571 CBS domain YIM_RS27520 PF03471 Transporter associated domain YIM_RS27525 PF01595 Cyclin M transmembrane N-terminal domain YIM_RS27525 PF00571 CBS domain YIM_RS27540 PF00248 Aldo/keto reductase family YIM_RS27560 PF13411 MerR HTH family regulatory protein YIM_RS27565 PF00440 Bacterial regulatory proteins, tetR family YIM_RS27565 PF13977 BetI-type transcriptional repressor, C-terminal YIM_RS27570 PF02577 Bifunctional nuclease YIM_RS27575 PF00376 MerR family regulatory protein YIM_RS27580 PF00498 FHA domain YIM_RS27585 PF01597 Glycine cleavage H-protein YIM_RS27590 PF01066 CDP-alcohol phosphatidyltransferase YIM_RS27605 PF00501 AMP-binding enzyme YIM_RS27605 PF13193 AMP-binding enzyme C-terminal domain YIM_RS27610 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS27615 PF00561 alpha/beta hydrolase fold YIM_RS27620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS27620 PF10414 Sirohaem synthase dimerisation region YIM_RS27620 PF14824 Sirohaem biosynthesis protein central YIM_RS27625 PF00023 Ankyrin repeat YIM_RS27625 PF12796 Ankyrin repeats (3 copies) YIM_RS27635 PF01783 Ribosomal L32p protein family YIM_RS27640 PF01197 Ribosomal protein L31 YIM_RS27645 PF07683 Cobalamin synthesis protein cobW C-terminal domain YIM_RS27645 PF02492 CobW/HypB/UreG, nucleotide-binding domain YIM_RS27650 PF00830 Ribosomal L28 family YIM_RS27655 PF00471 Ribosomal protein L33 YIM_RS27660 PF00253 Ribosomal protein S14p/S29e YIM_RS27665 PF01084 Ribosomal protein S18 YIM_RS27670 PF00144 Beta-lactamase YIM_RS27680 PF00296 Luciferase-like monooxygenase YIM_RS27685 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_RS27695 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal YIM_RS27695 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal YIM_RS27700 PF00296 Luciferase-like monooxygenase YIM_RS27715 PF07836 DmpG-like communication domain YIM_RS27715 PF00682 HMGL-like YIM_RS27720 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation YIM_RS27720 PF01118 Semialdehyde dehydrogenase, NAD binding domain YIM_RS27725 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_RS27735 PF00664 ABC transporter transmembrane region YIM_RS27735 PF00005 ABC transporter YIM_RS27740 PF00440 Bacterial regulatory proteins, tetR family YIM_RS27770 PF00069 Protein kinase domain YIM_RS27770 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS27795 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS27805 PF02424 ApbE family YIM_RS27815 PF00175 Oxidoreductase NAD-binding domain YIM_RS27815 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS27820 PF00072 Response regulator receiver domain YIM_RS27820 PF00486 Transcriptional regulatory protein, C terminal YIM_RS27825 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS27825 PF00672 HAMP domain YIM_RS27825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS27830 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_RS27835 PF00753 Metallo-beta-lactamase superfamily YIM_RS27835 PF16123 Hydroxyacylglutathione hydrolase C-terminus YIM_RS27845 PF00440 Bacterial regulatory proteins, tetR family YIM_RS27850 PF05853 beta-keto acid cleavage enzyme YIM_RS27855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS27855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS27860 PF00005 ABC transporter YIM_RS27860 PF17912 MalK OB fold domain YIM_RS27870 PF02056 Family 4 glycosyl hydrolase YIM_RS27870 PF11975 Family 4 glycosyl hydrolase C-terminal domain YIM_RS27875 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS27880 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS27890 PF00480 ROK family YIM_RS27900 PF12848 ABC transporter YIM_RS27900 PF16326 ABC transporter C-terminal domain YIM_RS27900 PF00005 ABC transporter YIM_RS27905 PF01022 Bacterial regulatory protein, arsR family YIM_RS27920 PF00561 alpha/beta hydrolase fold YIM_RS27930 PF04545 Sigma-70, region 4 YIM_RS27930 PF04542 Sigma-70 region 2 YIM_RS27935 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS27970 PF00348 Polyprenyl synthetase YIM_RS27990 PF01556 DnaJ C terminal domain YIM_RS27990 PF00684 DnaJ central domain YIM_RS27990 PF00226 DnaJ domain YIM_RS27995 PF03928 Haem-degrading YIM_RS28005 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS28010 PF00722 Glycosyl hydrolases family 16 YIM_RS28015 PF12706 Beta-lactamase superfamily domain YIM_RS28020 PF00582 Universal stress protein family YIM_RS28030 PF02735 Ku70/Ku80 beta-barrel domain YIM_RS28040 PF00005 ABC transporter YIM_RS28050 PF07730 Histidine kinase YIM_RS28055 PF00196 Bacterial regulatory proteins, luxR family YIM_RS28055 PF00072 Response regulator receiver domain YIM_RS28060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS28060 PF00289 Biotin carboxylase, N-terminal domain YIM_RS28060 PF02785 Biotin carboxylase C-terminal domain YIM_RS28065 PF09594 Glycosyltransferase family 87 YIM_RS28070 PF00072 Response regulator receiver domain YIM_RS28070 PF00196 Bacterial regulatory proteins, luxR family YIM_RS28075 PF07730 Histidine kinase YIM_RS28080 PF11799 impB/mucB/samB family C-terminal domain YIM_RS28080 PF00817 impB/mucB/samB family YIM_RS28105 PF00398 Ribosomal RNA adenine dimethylase YIM_RS28110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS28110 PF07730 Histidine kinase YIM_RS28115 PF00196 Bacterial regulatory proteins, luxR family YIM_RS28115 PF00072 Response regulator receiver domain YIM_RS28120 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YIM_RS28120 PF01409 tRNA synthetases class II core domain (F) YIM_RS28130 PF00561 alpha/beta hydrolase fold YIM_RS28135 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS28145 PF02983 Alpha-lytic protease prodomain YIM_RS28150 PF12680 SnoaL-like domain YIM_RS28150 PF04542 Sigma-70 region 2 YIM_RS28150 PF08281 Sigma-70, region 4 YIM_RS28155 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_RS28160 PF08946 Osmosensory transporter coiled coil YIM_RS28160 PF00083 Sugar (and other) transporter YIM_RS28165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS28165 PF03466 LysR substrate binding domain YIM_RS28170 PF02983 Alpha-lytic protease prodomain YIM_RS28175 PF01425 Amidase YIM_RS28180 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS28205 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS28205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS28205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS28210 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) YIM_RS28220 PF00805 Pentapeptide repeats (8 copies) YIM_RS28230 PF01636 Phosphotransferase enzyme family YIM_RS28250 PF00005 ABC transporter YIM_RS28255 PF00392 Bacterial regulatory proteins, gntR family YIM_RS28270 PF04185 Phosphoesterase family YIM_RS28275 PF03704 Bacterial transcriptional activator domain YIM_RS28275 PF00931 NB-ARC domain YIM_RS28275 PF00486 Transcriptional regulatory protein, C terminal YIM_RS28285 PF00931 NB-ARC domain YIM_RS28285 PF03704 Bacterial transcriptional activator domain YIM_RS28285 PF00486 Transcriptional regulatory protein, C terminal YIM_RS28290 PF00440 Bacterial regulatory proteins, tetR family YIM_RS28295 PF00067 Cytochrome P450 YIM_RS28305 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_RS28305 PF00005 ABC transporter YIM_RS28310 PF00005 ABC transporter YIM_RS28330 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_RS28330 PF00440 Bacterial regulatory proteins, tetR family YIM_RS28340 PF03704 Bacterial transcriptional activator domain YIM_RS28340 PF00486 Transcriptional regulatory protein, C terminal YIM_RS28340 PF00931 NB-ARC domain YIM_RS28345 PF00293 NUDIX domain YIM_RS28380 PF01047 MarR family YIM_RS28385 PF00501 AMP-binding enzyme YIM_RS28385 PF13193 AMP-binding enzyme C-terminal domain YIM_RS28395 PF00480 ROK family YIM_RS28400 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS28405 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS28420 PF01261 Xylose isomerase-like TIM barrel YIM_RS28445 PF12146 Serine aminopeptidase, S33 YIM_RS28450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS28450 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS28450 PF08448 PAS fold YIM_RS28450 PF13426 PAS domain YIM_RS28450 PF00072 Response regulator receiver domain YIM_RS28465 PF07690 Major Facilitator Superfamily YIM_RS28470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS28470 PF03466 LysR substrate binding domain YIM_RS28475 PF03600 Citrate transporter YIM_RS28495 PF01547 Bacterial extracellular solute-binding protein YIM_RS28510 PF16918 Protein kinase G tetratricopeptide repeat YIM_RS28510 PF16919 Protein kinase G rubredoxin domain YIM_RS28510 PF00069 Protein kinase domain YIM_RS28520 PF00069 Protein kinase domain YIM_RS28520 PF03793 PASTA domain YIM_RS28525 PF01810 LysE type translocator YIM_RS28530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS28530 PF03466 LysR substrate binding domain YIM_RS28540 PF16499 Alpha galactosidase A YIM_RS28540 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_RS28545 PF00155 Aminotransferase class I and II YIM_RS28560 PF00072 Response regulator receiver domain YIM_RS28560 PF00196 Bacterial regulatory proteins, luxR family YIM_RS28565 PF00931 NB-ARC domain YIM_RS28565 PF00486 Transcriptional regulatory protein, C terminal YIM_RS28565 PF03704 Bacterial transcriptional activator domain YIM_RS28595 PF05593 RHS Repeat YIM_RS28595 PF05488 PAAR motif YIM_RS28615 PF13362 Toprim domain YIM_RS28615 PF18818 Metallopeptidase superfamily domain YIM_RS28615 PF08401 Domain of unknown function (DUF1738) YIM_RS28695 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain YIM_RS28695 PF13538 UvrD-like helicase C-terminal domain YIM_RS28695 PF14490 Helix-hairpin-helix containing domain YIM_RS28765 PF01965 DJ-1/PfpI family YIM_RS28770 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS28770 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS28770 PF00107 Zinc-binding dehydrogenase YIM_RS28770 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS28770 PF00698 Acyl transferase domain YIM_RS28770 PF08659 KR domain YIM_RS28770 PF00550 Phosphopantetheine attachment site YIM_RS28770 PF14765 Polyketide synthase dehydratase YIM_RS28770 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS28780 PF00550 Phosphopantetheine attachment site YIM_RS28780 PF08659 KR domain YIM_RS28780 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS28780 PF14765 Polyketide synthase dehydratase YIM_RS28780 PF00698 Acyl transferase domain YIM_RS28780 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS28780 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS28780 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS28785 PF16295 Tetracyclin repressor-like, C-terminal domain YIM_RS28785 PF00440 Bacterial regulatory proteins, tetR family YIM_RS28805 PF03176 MMPL family YIM_RS28810 PF07730 Histidine kinase YIM_RS28815 PF00196 Bacterial regulatory proteins, luxR family YIM_RS28815 PF00072 Response regulator receiver domain YIM_RS28835 PF00440 Bacterial regulatory proteins, tetR family YIM_RS28850 PF00155 Aminotransferase class I and II YIM_RS28855 PF00155 Aminotransferase class I and II YIM_RS28870 PF00072 Response regulator receiver domain YIM_RS28870 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS28880 PF07729 FCD domain YIM_RS28880 PF00392 Bacterial regulatory proteins, gntR family YIM_RS28890 PF13378 Enolase C-terminal domain-like YIM_RS28890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS28895 PF00561 alpha/beta hydrolase fold YIM_RS28900 PF00857 Isochorismatase family YIM_RS28910 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS28910 PF01799 [2Fe-2S] binding domain YIM_RS28915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS28915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS28920 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS28920 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS28925 PF07690 Major Facilitator Superfamily YIM_RS28930 PF01494 FAD binding domain YIM_RS28935 PF17645 Arylmalonate decarboxylase YIM_RS28950 PF00294 pfkB family carbohydrate kinase YIM_RS28960 PF03747 ADP-ribosylglycohydrolase YIM_RS28970 PF00106 short chain dehydrogenase YIM_RS29005 PF00561 alpha/beta hydrolase fold YIM_RS29030 PF03009 Glycerophosphoryl diester phosphodiesterase family YIM_RS29045 PF00005 ABC transporter YIM_RS29050 PF00005 ABC transporter YIM_RS29050 PF00664 ABC transporter transmembrane region YIM_RS29055 PF00296 Luciferase-like monooxygenase YIM_RS29060 PF13471 Transglutaminase-like superfamily YIM_RS29085 PF00498 FHA domain YIM_RS29085 PF03704 Bacterial transcriptional activator domain YIM_RS29085 PF00486 Transcriptional regulatory protein, C terminal YIM_RS29100 PF00196 Bacterial regulatory proteins, luxR family YIM_RS29105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS29105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS29130 PF00067 Cytochrome P450 YIM_RS29135 PF14765 Polyketide synthase dehydratase YIM_RS29135 PF00698 Acyl transferase domain YIM_RS29135 PF00550 Phosphopantetheine attachment site YIM_RS29135 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS29135 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS29135 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS29135 PF08659 KR domain YIM_RS29140 PF08659 KR domain YIM_RS29140 PF14765 Polyketide synthase dehydratase YIM_RS29140 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS29140 PF00550 Phosphopantetheine attachment site YIM_RS29140 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS29140 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS29140 PF00698 Acyl transferase domain YIM_RS29150 PF00698 Acyl transferase domain YIM_RS29150 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS29150 PF14765 Polyketide synthase dehydratase YIM_RS29150 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS29150 PF00550 Phosphopantetheine attachment site YIM_RS29150 PF08659 KR domain YIM_RS29150 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS29150 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS29155 PF14765 Polyketide synthase dehydratase YIM_RS29155 PF00698 Acyl transferase domain YIM_RS29155 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS29155 PF00550 Phosphopantetheine attachment site YIM_RS29155 PF08659 KR domain YIM_RS29155 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS29155 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS29155 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS29160 PF00067 Cytochrome P450 YIM_RS29170 PF00296 Luciferase-like monooxygenase YIM_RS29175 PF00106 short chain dehydrogenase YIM_RS29190 PF00884 Sulfatase YIM_RS29200 PF03466 LysR substrate binding domain YIM_RS29200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS29205 PF01872 RibD C-terminal domain YIM_RS29210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_RS29210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_RS29230 PF00171 Aldehyde dehydrogenase family YIM_RS29260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS29260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS29265 PF00326 Prolyl oligopeptidase family YIM_RS29270 PF00155 Aminotransferase class I and II YIM_RS29285 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_RS29290 PF00009 Elongation factor Tu GTP binding domain YIM_RS29295 PF00891 O-methyltransferase domain YIM_RS29305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS29305 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS29305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS29315 PF00107 Zinc-binding dehydrogenase YIM_RS29315 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS29320 PF00501 AMP-binding enzyme YIM_RS29320 PF13193 AMP-binding enzyme C-terminal domain YIM_RS29345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS29345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS29345 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS29350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS29350 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS29350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS29370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS29370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS29370 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS29385 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS29390 PF08946 Osmosensory transporter coiled coil YIM_RS29390 PF00083 Sugar (and other) transporter YIM_RS29420 PF00293 NUDIX domain YIM_RS29425 PF01425 Amidase YIM_RS29435 PF07993 Male sterility protein YIM_RS29435 PF13193 AMP-binding enzyme C-terminal domain YIM_RS29435 PF00550 Phosphopantetheine attachment site YIM_RS29435 PF00501 AMP-binding enzyme YIM_RS29435 PF00668 Condensation domain YIM_RS29510 PF05108 Type VII secretion system ESX-1, transport TM domain B YIM_RS29515 PF05922 Peptidase inhibitor I9 YIM_RS29515 PF00082 Subtilase family YIM_RS29525 PF02575 YbaB/EbfC DNA-binding family YIM_RS29540 PF01580 FtsK/SpoIIIE family YIM_RS29580 PF00196 Bacterial regulatory proteins, luxR family YIM_RS29585 PF17866 AAA lid domain YIM_RS29585 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS29595 PF07681 DoxX YIM_RS29600 PF08281 Sigma-70, region 4 YIM_RS29600 PF04542 Sigma-70 region 2 YIM_RS29610 PF00684 DnaJ central domain YIM_RS29610 PF01556 DnaJ C terminal domain YIM_RS29610 PF00226 DnaJ domain YIM_RS29615 PF00226 DnaJ domain YIM_RS29615 PF01556 DnaJ C terminal domain YIM_RS29615 PF00684 DnaJ central domain YIM_RS29620 PF00011 Hsp20/alpha crystallin family YIM_RS29630 PF00440 Bacterial regulatory proteins, tetR family YIM_RS29630 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS29640 PF06441 Epoxide hydrolase N terminus YIM_RS29650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS29650 PF03466 LysR substrate binding domain YIM_RS29655 PF17200 Single Cache domain 2 YIM_RS29655 PF07730 Histidine kinase YIM_RS29665 PF01638 HxlR-like helix-turn-helix YIM_RS29670 PF00561 alpha/beta hydrolase fold YIM_RS29680 PF02515 CoA-transferase family III YIM_RS29685 PF00682 HMGL-like YIM_RS29700 PF01804 Penicillin amidase YIM_RS29705 PF13378 Enolase C-terminal domain-like YIM_RS29705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS29715 PF07690 Major Facilitator Superfamily YIM_RS29720 PF07729 FCD domain YIM_RS29720 PF00392 Bacterial regulatory proteins, gntR family YIM_RS29740 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS29740 PF00672 HAMP domain YIM_RS29740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS29745 PF00486 Transcriptional regulatory protein, C terminal YIM_RS29745 PF00072 Response regulator receiver domain YIM_RS29755 PF09278 MerR, DNA binding YIM_RS29755 PF00376 MerR family regulatory protein YIM_RS29760 PF03527 RHS protein YIM_RS29760 PF05593 RHS Repeat YIM_RS29760 PF14220 Domain of unknown function (DUF4329) YIM_RS29780 PF01979 Amidohydrolase family YIM_RS29780 PF13382 Adenine deaminase C-terminal domain YIM_RS29790 PF02779 Transketolase, pyrimidine binding domain YIM_RS29790 PF02780 Transketolase, C-terminal domain YIM_RS29795 PF00456 Transketolase, thiamine diphosphate binding domain YIM_RS29800 PF07840 FadR C-terminal domain YIM_RS29800 PF00392 Bacterial regulatory proteins, gntR family YIM_RS29805 PF00106 short chain dehydrogenase YIM_RS29815 PF00083 Sugar (and other) transporter YIM_RS29815 PF07690 Major Facilitator Superfamily YIM_RS29825 PF00741 Gas vesicle protein YIM_RS29835 PF00741 Gas vesicle protein YIM_RS29840 PF00741 Gas vesicle protein YIM_RS29840 PF05121 Gas vesicle protein K YIM_RS29845 PF00741 Gas vesicle protein YIM_RS29855 PF00440 Bacterial regulatory proteins, tetR family YIM_RS29860 PF01568 Molydopterin dinucleotide binding domain YIM_RS29860 PF00384 Molybdopterin oxidoreductase YIM_RS29860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_RS29865 PF01323 DSBA-like thioredoxin domain YIM_RS29885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS29885 PF03466 LysR substrate binding domain YIM_RS29890 PF00391 PEP-utilising enzyme, mobile domain YIM_RS29890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YIM_RS29905 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS29905 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS29910 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS29910 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS29915 PF01799 [2Fe-2S] binding domain YIM_RS29915 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS29925 PF00743 Flavin-binding monooxygenase-like YIM_RS29930 PF07729 FCD domain YIM_RS29930 PF00392 Bacterial regulatory proteins, gntR family YIM_RS29940 PF02653 Branched-chain amino acid transport system / permease component YIM_RS29945 PF00005 ABC transporter YIM_RS29980 PF00501 AMP-binding enzyme YIM_RS29980 PF13193 AMP-binding enzyme C-terminal domain YIM_RS29990 PF00440 Bacterial regulatory proteins, tetR family YIM_RS29995 PF12146 Serine aminopeptidase, S33 YIM_RS30025 PF00743 Flavin-binding monooxygenase-like YIM_RS30035 PF00970 Oxidoreductase FAD-binding domain YIM_RS30035 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS30040 PF10604 Polyketide cyclase / dehydrase and lipid transport YIM_RS30060 PF01494 FAD binding domain YIM_RS30070 PF01047 MarR family YIM_RS30080 PF13977 BetI-type transcriptional repressor, C-terminal YIM_RS30080 PF00440 Bacterial regulatory proteins, tetR family YIM_RS30085 PF13360 PQQ-like domain YIM_RS30085 PF00069 Protein kinase domain YIM_RS30095 PF07690 Major Facilitator Superfamily YIM_RS30100 PF02082 Transcriptional regulator YIM_RS30105 PF03793 PASTA domain YIM_RS30105 PF00069 Protein kinase domain YIM_RS30120 PF00171 Aldehyde dehydrogenase family YIM_RS30130 PF00106 short chain dehydrogenase YIM_RS30135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS30135 PF03466 LysR substrate binding domain YIM_RS30160 PF00440 Bacterial regulatory proteins, tetR family YIM_RS30205 PF02595 Glycerate kinase family YIM_RS30210 PF00149 Calcineurin-like phosphoesterase YIM_RS30215 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS30215 PF00107 Zinc-binding dehydrogenase YIM_RS30220 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_RS30225 PF01614 Bacterial transcriptional regulator YIM_RS30225 PF09339 IclR helix-turn-helix domain YIM_RS30230 PF00920 Dehydratase family YIM_RS30255 PF00561 alpha/beta hydrolase fold YIM_RS30275 PF00583 Acetyltransferase (GNAT) family YIM_RS30305 PF08281 Sigma-70, region 4 YIM_RS30305 PF04542 Sigma-70 region 2 YIM_RS30320 PF02146 Sir2 family YIM_RS30325 PF00069 Protein kinase domain YIM_RS30335 PF00356 Bacterial regulatory proteins, lacI family YIM_RS30345 PF01638 HxlR-like helix-turn-helix YIM_RS30350 PF00542 Ribosomal protein L7/L12 C-terminal domain YIM_RS30350 PF16320 Ribosomal protein L7/L12 dimerisation domain YIM_RS30355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS30355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS30360 PF00440 Bacterial regulatory proteins, tetR family YIM_RS30375 PF08546 Ketopantoate reductase PanE/ApbA C terminal YIM_RS30375 PF02558 Ketopantoate reductase PanE/ApbA YIM_RS30385 PF00083 Sugar (and other) transporter YIM_RS30390 PF01522 Polysaccharide deacetylase YIM_RS30405 PF10703 MoaF N-terminal domain YIM_RS30405 PF17409 MoaF C-terminal domain YIM_RS30425 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_RS30425 PF00005 ABC transporter YIM_RS30430 PF00005 ABC transporter YIM_RS30445 PF17409 MoaF C-terminal domain YIM_RS30445 PF10703 MoaF N-terminal domain YIM_RS30450 PF13382 Adenine deaminase C-terminal domain YIM_RS30450 PF01979 Amidohydrolase family YIM_RS30455 PF05199 GMC oxidoreductase YIM_RS30455 PF00732 GMC oxidoreductase YIM_RS30460 PF00171 Aldehyde dehydrogenase family YIM_RS30465 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_RS30470 PF00392 Bacterial regulatory proteins, gntR family YIM_RS30470 PF07729 FCD domain YIM_RS30475 PF00701 Dihydrodipicolinate synthetase family YIM_RS30480 PF00171 Aldehyde dehydrogenase family YIM_RS30485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS30490 PF00891 O-methyltransferase domain YIM_RS30495 PF00486 Transcriptional regulatory protein, C terminal YIM_RS30495 PF03704 Bacterial transcriptional activator domain YIM_RS30495 PF00931 NB-ARC domain YIM_RS30500 PF08291 Peptidase M15 YIM_RS30500 PF01471 Putative peptidoglycan binding domain YIM_RS30510 PF00041 Fibronectin type III domain YIM_RS30510 PF00704 Glycosyl hydrolases family 18 YIM_RS30515 PF01965 DJ-1/PfpI family YIM_RS30520 PF01965 DJ-1/PfpI family YIM_RS30525 PF09594 Glycosyltransferase family 87 YIM_RS30530 PF00120 Glutamine synthetase, catalytic domain YIM_RS30535 PF04183 IucA / IucC family YIM_RS30535 PF06276 Ferric iron reductase FhuF-like transporter YIM_RS30540 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YIM_RS30545 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_RS30550 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YIM_RS30555 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YIM_RS30565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region YIM_RS30565 PF00326 Prolyl oligopeptidase family YIM_RS30570 PF03976 Polyphosphate kinase 2 (PPK2) YIM_RS30575 PF00202 Aminotransferase class-III YIM_RS30585 PF07729 FCD domain YIM_RS30585 PF00392 Bacterial regulatory proteins, gntR family YIM_RS30590 PF00005 ABC transporter YIM_RS30590 PF12848 ABC transporter YIM_RS30605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_RS30605 PF01872 RibD C-terminal domain YIM_RS30610 PF08281 Sigma-70, region 4 YIM_RS30610 PF04542 Sigma-70 region 2 YIM_RS30620 PF03780 Asp23 family, cell envelope-related function YIM_RS30650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YIM_RS30650 PF01627 Hpt domain YIM_RS30650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS30650 PF00672 HAMP domain YIM_RS30650 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS30650 PF00072 Response regulator receiver domain YIM_RS30660 PF00196 Bacterial regulatory proteins, luxR family YIM_RS30660 PF00072 Response regulator receiver domain YIM_RS30665 PF04679 ATP dependent DNA ligase C terminal region YIM_RS30665 PF01068 ATP dependent DNA ligase domain YIM_RS30680 PF13298 DNA polymerase Ligase (LigD) YIM_RS30680 PF04679 ATP dependent DNA ligase C terminal region YIM_RS30680 PF01068 ATP dependent DNA ligase domain YIM_RS30685 PF13302 Acetyltransferase (GNAT) domain YIM_RS30690 PF09335 SNARE associated Golgi protein YIM_RS30695 PF03793 PASTA domain YIM_RS30695 PF00069 Protein kinase domain YIM_RS30715 PF01641 SelR domain YIM_RS30735 PF05114 Protein of unknown function (DUF692) YIM_RS30745 PF02515 CoA-transferase family III YIM_RS30755 PF06778 Chlorite dismutase YIM_RS30760 PF01593 Flavin containing amine oxidoreductase YIM_RS30765 PF01208 Uroporphyrinogen decarboxylase (URO-D) YIM_RS30780 PF03994 Domain of Unknown Function (DUF350) YIM_RS30800 PF00072 Response regulator receiver domain YIM_RS30800 PF00196 Bacterial regulatory proteins, luxR family YIM_RS30815 PF00704 Glycosyl hydrolases family 18 YIM_RS30815 PF00553 Cellulose binding domain YIM_RS30815 PF00041 Fibronectin type III domain YIM_RS30820 PF18416 N-acetylglucosamine binding protein domain 2 YIM_RS30820 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_RS30830 PF00108 Thiolase, N-terminal domain YIM_RS30830 PF02803 Thiolase, C-terminal domain YIM_RS30835 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS30835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS30835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS30855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS30855 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS30855 PF00672 HAMP domain YIM_RS30860 PF00486 Transcriptional regulatory protein, C terminal YIM_RS30860 PF00072 Response regulator receiver domain YIM_RS30865 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS30880 PF00491 Arginase family YIM_RS30885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS30885 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS30885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS30890 PF00171 Aldehyde dehydrogenase family YIM_RS30910 PF04545 Sigma-70, region 4 YIM_RS30910 PF04542 Sigma-70 region 2 YIM_RS30910 PF04539 Sigma-70 region 3 YIM_RS30915 PF02780 Transketolase, C-terminal domain YIM_RS30915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YIM_RS30915 PF02779 Transketolase, pyrimidine binding domain YIM_RS30925 PF01757 Acyltransferase family YIM_RS30930 PF00171 Aldehyde dehydrogenase family YIM_RS30940 PF00732 GMC oxidoreductase YIM_RS30940 PF05199 GMC oxidoreductase YIM_RS30945 PF01938 TRAM domain YIM_RS30945 PF05958 tRNA (Uracil-5-)-methyltransferase YIM_RS30950 PF13520 Amino acid permease YIM_RS30955 PF02080 TrkA-C domain YIM_RS30955 PF02254 TrkA-N domain YIM_RS30960 PF02080 TrkA-C domain YIM_RS30960 PF02254 TrkA-N domain YIM_RS30985 PF01810 LysE type translocator YIM_RS30995 PF00692 dUTPase YIM_RS31015 PF00459 Inositol monophosphatase family YIM_RS31020 PF00480 ROK family YIM_RS31025 PF04545 Sigma-70, region 4 YIM_RS31025 PF04539 Sigma-70 region 3 YIM_RS31025 PF04542 Sigma-70 region 2 YIM_RS31025 PF00140 Sigma-70 factor, region 1.2 YIM_RS31035 PF01638 HxlR-like helix-turn-helix YIM_RS31040 PF00005 ABC transporter YIM_RS31045 PF00480 ROK family YIM_RS31050 PF00440 Bacterial regulatory proteins, tetR family YIM_RS31055 PF00067 Cytochrome P450 YIM_RS31065 PF01433 Peptidase family M1 domain YIM_RS31065 PF11838 ERAP1-like C-terminal domain YIM_RS31070 PF00550 Phosphopantetheine attachment site YIM_RS31070 PF07993 Male sterility protein YIM_RS31070 PF00668 Condensation domain YIM_RS31070 PF13193 AMP-binding enzyme C-terminal domain YIM_RS31070 PF00501 AMP-binding enzyme YIM_RS31075 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YIM_RS31075 PF01926 50S ribosome-binding GTPase YIM_RS31095 PF00999 Sodium/hydrogen exchanger family YIM_RS31100 PF01042 Endoribonuclease L-PSP YIM_RS31105 PF01479 S4 domain YIM_RS31105 PF00849 RNA pseudouridylate synthase YIM_RS31110 PF04079 Segregation and condensation complex subunit ScpB YIM_RS31115 PF02616 Segregation and condensation protein ScpA YIM_RS31125 PF13614 AAA domain YIM_RS31130 PF00589 Phage integrase family YIM_RS31130 PF02899 Phage integrase, N-terminal SAM-like domain YIM_RS31140 PF00293 NUDIX domain YIM_RS31145 PF06418 CTP synthase N-terminus YIM_RS31145 PF00117 Glutamine amidotransferase class-I YIM_RS31150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YIM_RS31155 PF11382 Copper transport outer membrane protein, MctB YIM_RS31165 PF02463 RecF/RecN/SMC N terminal domain YIM_RS31170 PF01513 ATP-NAD kinase YIM_RS31175 PF01728 FtsJ-like methyltransferase YIM_RS31175 PF01479 S4 domain YIM_RS31185 PF13344 Haloacid dehalogenase-like hydrolase YIM_RS31185 PF18407 GCN5-related N-acetyltransferase like domain YIM_RS31210 PF00579 tRNA synthetases class I (W and Y) YIM_RS31215 PF02245 Methylpurine-DNA glycosylase (MPG) YIM_RS31230 PF13761 Domain of unknown function (DUF4166) YIM_RS31240 PF14698 Argininosuccinate lyase C-terminal YIM_RS31240 PF00206 Lyase YIM_RS31245 PF01316 Arginine repressor, DNA binding domain YIM_RS31245 PF02863 Arginine repressor, C-terminal domain YIM_RS31250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_RS31250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_RS31255 PF00202 Aminotransferase class-III YIM_RS31260 PF00696 Amino acid kinase family YIM_RS31265 PF01960 ArgJ family YIM_RS31270 PF02774 Semialdehyde dehydrogenase, dimerisation domain YIM_RS31270 PF01118 Semialdehyde dehydrogenase, NAD binding domain YIM_RS31285 PF03147 Ferredoxin-fold anticodon binding domain YIM_RS31285 PF03484 tRNA synthetase B5 domain YIM_RS31285 PF03483 B3/4 domain YIM_RS31285 PF01588 Putative tRNA binding domain YIM_RS31285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YIM_RS31290 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YIM_RS31290 PF01409 tRNA synthetases class II core domain (F) YIM_RS31295 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_RS31295 PF00588 SpoU rRNA Methylase family YIM_RS31300 PF00453 Ribosomal protein L20 YIM_RS31305 PF01632 Ribosomal protein L35 YIM_RS31310 PF05198 Translation initiation factor IF-3, N-terminal domain YIM_RS31310 PF00707 Translation initiation factor IF-3, C-terminal domain YIM_RS31320 PF07729 FCD domain YIM_RS31320 PF00392 Bacterial regulatory proteins, gntR family YIM_RS31325 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS31335 PF01614 Bacterial transcriptional regulator YIM_RS31335 PF09339 IclR helix-turn-helix domain YIM_RS31340 PF00294 pfkB family carbohydrate kinase YIM_RS31350 PF07969 Amidohydrolase family YIM_RS31355 PF02447 GntP family permease YIM_RS31360 PF10282 Lactonase, 7-bladed beta-propeller YIM_RS31370 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS31375 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS31380 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_RS31380 PF00728 Glycosyl hydrolase family 20, catalytic domain YIM_RS31385 PF00293 NUDIX domain YIM_RS31390 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS31390 PF00440 Bacterial regulatory proteins, tetR family YIM_RS31395 PF00144 Beta-lactamase YIM_RS31400 PF03816 Cell envelope-related transcriptional attenuator domain YIM_RS31400 PF13399 LytR cell envelope-related transcriptional attenuator YIM_RS31410 PF00072 Response regulator receiver domain YIM_RS31410 PF04703 FaeA-like protein YIM_RS31415 PF17203 Single cache domain 3 YIM_RS31415 PF00989 PAS fold YIM_RS31415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS31415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YIM_RS31420 PF00375 Sodium:dicarboxylate symporter family YIM_RS31435 PF17755 UvrA DNA-binding domain YIM_RS31435 PF00005 ABC transporter YIM_RS31435 PF17760 UvrA interaction domain YIM_RS31490 PF04679 ATP dependent DNA ligase C terminal region YIM_RS31490 PF01068 ATP dependent DNA ligase domain YIM_RS31490 PF13298 DNA polymerase Ligase (LigD) YIM_RS31510 PF01022 Bacterial regulatory protein, arsR family YIM_RS31520 PF00005 ABC transporter YIM_RS31525 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS31530 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS31545 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain YIM_RS31545 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_RS31545 PF00703 Glycosyl hydrolases family 2 YIM_RS31565 PF11066 Protein of unknown function (DUF2867) YIM_RS31565 PF13460 NAD(P)H-binding YIM_RS31570 PF13291 ACT domain YIM_RS31570 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS31575 PF12833 Helix-turn-helix domain YIM_RS31590 PF00248 Aldo/keto reductase family YIM_RS31600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_RS31600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_RS31610 PF00356 Bacterial regulatory proteins, lacI family YIM_RS31615 PF13407 Periplasmic binding protein domain YIM_RS31620 PF02653 Branched-chain amino acid transport system / permease component YIM_RS31625 PF00005 ABC transporter YIM_RS31650 PF07676 WD40-like Beta Propeller Repeat YIM_RS31650 PF00326 Prolyl oligopeptidase family YIM_RS31655 PF03741 Integral membrane protein TerC family YIM_RS31660 PF00005 ABC transporter YIM_RS31670 PF05576 PS-10 peptidase S37 YIM_RS31680 PF00271 Helicase conserved C-terminal domain YIM_RS31680 PF04851 Type III restriction enzyme, res subunit YIM_RS31680 PF02151 UvrB/uvrC motif YIM_RS31680 PF17757 UvrB interaction domain YIM_RS31680 PF12344 Ultra-violet resistance protein B YIM_RS31700 PF04493 Endonuclease V YIM_RS31705 PF00005 ABC transporter YIM_RS31720 PF07730 Histidine kinase YIM_RS31725 PF00196 Bacterial regulatory proteins, luxR family YIM_RS31725 PF00072 Response regulator receiver domain YIM_RS31730 PF01121 Dephospho-CoA kinase YIM_RS31730 PF04229 GrpB protein YIM_RS31745 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS31745 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS31745 PF08659 KR domain YIM_RS31745 PF00550 Phosphopantetheine attachment site YIM_RS31745 PF14765 Polyketide synthase dehydratase YIM_RS31745 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS31745 PF00107 Zinc-binding dehydrogenase YIM_RS31745 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS31745 PF00698 Acyl transferase domain YIM_RS31750 PF00698 Acyl transferase domain YIM_RS31750 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS31750 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS31750 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS31750 PF08659 KR domain YIM_RS31750 PF00550 Phosphopantetheine attachment site YIM_RS31750 PF14765 Polyketide synthase dehydratase YIM_RS31755 PF00550 Phosphopantetheine attachment site YIM_RS31760 PF00561 alpha/beta hydrolase fold YIM_RS31765 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YIM_RS31780 PF00575 S1 RNA binding domain YIM_RS31785 PF01209 ubiE/COQ5 methyltransferase family YIM_RS31825 PF00149 Calcineurin-like phosphoesterase YIM_RS31845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YIM_RS31845 PF01367 5'-3' exonuclease, C-terminal SAM fold YIM_RS31845 PF00476 DNA polymerase family A YIM_RS31850 PF03061 Thioesterase superfamily YIM_RS31855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS31855 PF03466 LysR substrate binding domain YIM_RS31865 PF00005 ABC transporter YIM_RS31870 PF00005 ABC transporter YIM_RS31870 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_RS31875 PF02653 Branched-chain amino acid transport system / permease component YIM_RS31875 PF11862 Domain of unknown function (DUF3382) YIM_RS31880 PF02653 Branched-chain amino acid transport system / permease component YIM_RS31885 PF13458 Periplasmic binding protein YIM_RS31890 PF00072 Response regulator receiver domain YIM_RS31890 PF03861 ANTAR domain YIM_RS31900 PF14659 Phage integrase, N-terminal SAM-like domain YIM_RS31900 PF00589 Phage integrase family YIM_RS31945 PF01580 FtsK/SpoIIIE family YIM_RS31945 PF09397 Ftsk gamma domain YIM_RS31945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YIM_RS31945 PF17854 FtsK alpha domain YIM_RS32015 PF00067 Cytochrome P450 YIM_RS32040 PF00753 Metallo-beta-lactamase superfamily YIM_RS32045 PF00135 Carboxylesterase family YIM_RS32060 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS32095 PF00975 Thioesterase domain YIM_RS32095 PF00668 Condensation domain YIM_RS32095 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32095 PF00550 Phosphopantetheine attachment site YIM_RS32095 PF00501 AMP-binding enzyme YIM_RS32105 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_RS32115 PF00501 AMP-binding enzyme YIM_RS32115 PF00550 Phosphopantetheine attachment site YIM_RS32115 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32115 PF00668 Condensation domain YIM_RS32125 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS32135 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS32135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS32135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS32140 PF00501 AMP-binding enzyme YIM_RS32150 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32150 PF00501 AMP-binding enzyme YIM_RS32150 PF00668 Condensation domain YIM_RS32150 PF00550 Phosphopantetheine attachment site YIM_RS32155 PF00486 Transcriptional regulatory protein, C terminal YIM_RS32155 PF00931 NB-ARC domain YIM_RS32155 PF03704 Bacterial transcriptional activator domain YIM_RS32160 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS32165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_RS32165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_RS32170 PF00550 Phosphopantetheine attachment site YIM_RS32170 PF00668 Condensation domain YIM_RS32170 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32170 PF00501 AMP-binding enzyme YIM_RS32170 PF00975 Thioesterase domain YIM_RS32175 PF02423 Ornithine cyclodeaminase/mu-crystallin family YIM_RS32180 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32180 PF00668 Condensation domain YIM_RS32180 PF00550 Phosphopantetheine attachment site YIM_RS32180 PF00501 AMP-binding enzyme YIM_RS32180 PF00975 Thioesterase domain YIM_RS32210 PF03527 RHS protein YIM_RS32210 PF05593 RHS Repeat YIM_RS32240 PF00294 pfkB family carbohydrate kinase YIM_RS32245 PF00107 Zinc-binding dehydrogenase YIM_RS32245 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS32250 PF00083 Sugar (and other) transporter YIM_RS32250 PF07690 Major Facilitator Superfamily YIM_RS32255 PF01232 Mannitol dehydrogenase Rossmann domain YIM_RS32255 PF08125 Mannitol dehydrogenase C-terminal domain YIM_RS32260 PF13378 Enolase C-terminal domain-like YIM_RS32260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS32265 PF00392 Bacterial regulatory proteins, gntR family YIM_RS32265 PF07729 FCD domain YIM_RS32275 PF01638 HxlR-like helix-turn-helix YIM_RS32290 PF00561 alpha/beta hydrolase fold YIM_RS32300 PF00534 Glycosyl transferases group 1 YIM_RS32300 PF13439 Glycosyltransferase Family 4 YIM_RS32305 PF08241 Methyltransferase domain YIM_RS32325 PF00356 Bacterial regulatory proteins, lacI family YIM_RS32345 PF00005 ABC transporter YIM_RS32350 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS32370 PF03737 Aldolase/RraA YIM_RS32375 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS32385 PF07729 FCD domain YIM_RS32385 PF00392 Bacterial regulatory proteins, gntR family YIM_RS32390 PF13378 Enolase C-terminal domain-like YIM_RS32390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS32395 PF01047 MarR family YIM_RS32400 PF00106 short chain dehydrogenase YIM_RS32405 PF04909 Amidohydrolase YIM_RS32410 PF00356 Bacterial regulatory proteins, lacI family YIM_RS32415 PF00232 Glycosyl hydrolase family 1 YIM_RS32420 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_RS32420 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YIM_RS32420 PF00703 Glycosyl hydrolases family 2 YIM_RS32425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS32430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS32440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS32440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS32445 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS32450 PF00005 ABC transporter YIM_RS32450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS32455 PF00005 ABC transporter YIM_RS32455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS32480 PF00356 Bacterial regulatory proteins, lacI family YIM_RS32485 PF18370 Rhamnogalacturonan I lyases beta-sheet domain YIM_RS32490 PF16990 Carbohydrate binding module (family 35) YIM_RS32490 PF00703 Glycosyl hydrolases family 2 YIM_RS32490 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain YIM_RS32490 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_RS32500 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS32505 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS32515 PF01341 Glycosyl hydrolases family 6 YIM_RS32515 PF00553 Cellulose binding domain YIM_RS32580 PF00561 alpha/beta hydrolase fold YIM_RS32585 PF07730 Histidine kinase YIM_RS32590 PF00196 Bacterial regulatory proteins, luxR family YIM_RS32590 PF00072 Response regulator receiver domain YIM_RS32595 PF01476 LysM domain YIM_RS32595 PF00756 Putative esterase YIM_RS32600 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32600 PF00501 AMP-binding enzyme YIM_RS32605 PF13185 GAF domain YIM_RS32605 PF00196 Bacterial regulatory proteins, luxR family YIM_RS32620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS32625 PF00232 Glycosyl hydrolase family 1 YIM_RS32630 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS32635 PF00005 ABC transporter YIM_RS32635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS32640 PF00005 ABC transporter YIM_RS32640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS32645 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_RS32655 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_RS32655 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_RS32655 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal YIM_RS32660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_RS32660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_RS32665 PF01061 ABC-2 type transporter YIM_RS32670 PF00005 ABC transporter YIM_RS32670 PF13732 Domain of unknown function (DUF4162) YIM_RS32675 PF12833 Helix-turn-helix domain YIM_RS32675 PF14525 AraC-binding-like domain YIM_RS32680 PF03704 Bacterial transcriptional activator domain YIM_RS32680 PF00486 Transcriptional regulatory protein, C terminal YIM_RS32680 PF00931 NB-ARC domain YIM_RS32700 PF08281 Sigma-70, region 4 YIM_RS32700 PF12680 SnoaL-like domain YIM_RS32700 PF04542 Sigma-70 region 2 YIM_RS32715 PF12680 SnoaL-like domain YIM_RS32715 PF04542 Sigma-70 region 2 YIM_RS32715 PF08281 Sigma-70, region 4 YIM_RS32720 PF07859 alpha/beta hydrolase fold YIM_RS32725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS32725 PF03466 LysR substrate binding domain YIM_RS32745 PF17862 AAA+ lid domain YIM_RS32745 PF06480 FtsH Extracellular YIM_RS32745 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS32745 PF01434 Peptidase family M41 YIM_RS32750 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS32750 PF00698 Acyl transferase domain YIM_RS32750 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS32750 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS32750 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS32750 PF08659 KR domain YIM_RS32750 PF00550 Phosphopantetheine attachment site YIM_RS32750 PF14765 Polyketide synthase dehydratase YIM_RS32755 PF00376 MerR family regulatory protein YIM_RS32755 PF09278 MerR, DNA binding YIM_RS32770 PF12894 Anaphase-promoting complex subunit 4 WD40 domain YIM_RS32770 PF00400 WD domain, G-beta repeat YIM_RS32790 PF02627 Carboxymuconolactone decarboxylase family YIM_RS32795 PF13411 MerR HTH family regulatory protein YIM_RS32810 PF00440 Bacterial regulatory proteins, tetR family YIM_RS32815 PF00356 Bacterial regulatory proteins, lacI family YIM_RS32820 PF00701 Dihydrodipicolinate synthetase family YIM_RS32825 PF01566 Natural resistance-associated macrophage protein YIM_RS32835 PF00144 Beta-lactamase YIM_RS32840 PF13649 Methyltransferase domain YIM_RS32850 PF00391 PEP-utilising enzyme, mobile domain YIM_RS32850 PF05524 PEP-utilising enzyme, N-terminal YIM_RS32850 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_RS32855 PF04198 Putative sugar-binding domain YIM_RS32860 PF00381 PTS HPr component phosphorylation site YIM_RS32865 PF03608 PTS system enzyme II sorbitol-specific factor YIM_RS32870 PF07663 Sorbitol phosphotransferase enzyme II C-terminus YIM_RS32870 PF03612 Sorbitol phosphotransferase enzyme II N-terminus YIM_RS32890 PF00676 Dehydrogenase E1 component YIM_RS32895 PF02779 Transketolase, pyrimidine binding domain YIM_RS32895 PF02780 Transketolase, C-terminal domain YIM_RS32895 PF00364 Biotin-requiring enzyme YIM_RS32900 PF00364 Biotin-requiring enzyme YIM_RS32900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_RS32900 PF02817 e3 binding domain YIM_RS32905 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YIM_RS32940 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS32940 PF00107 Zinc-binding dehydrogenase YIM_RS32940 PF13823 Alcohol dehydrogenase GroES-associated YIM_RS32950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS32950 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS32955 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS32955 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS32960 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS32960 PF01799 [2Fe-2S] binding domain YIM_RS32960 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS32965 PF07690 Major Facilitator Superfamily YIM_RS32970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS32970 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS32970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS32980 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS32980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS32980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS32985 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS32990 PF00501 AMP-binding enzyme YIM_RS32990 PF13193 AMP-binding enzyme C-terminal domain YIM_RS32995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS32995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS32995 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS33005 PF02803 Thiolase, C-terminal domain YIM_RS33005 PF00108 Thiolase, N-terminal domain YIM_RS33010 PF00296 Luciferase-like monooxygenase YIM_RS33015 PF03060 Nitronate monooxygenase YIM_RS33025 PF01144 Coenzyme A transferase YIM_RS33030 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS33035 PF00106 short chain dehydrogenase YIM_RS33045 PF01022 Bacterial regulatory protein, arsR family YIM_RS33060 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_RS33060 PF00440 Bacterial regulatory proteins, tetR family YIM_RS33070 PF00440 Bacterial regulatory proteins, tetR family YIM_RS33080 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS33080 PF00107 Zinc-binding dehydrogenase YIM_RS33085 PF12697 Alpha/beta hydrolase family YIM_RS33095 PF00196 Bacterial regulatory proteins, luxR family YIM_RS33110 PF00480 ROK family YIM_RS33115 PF07350 Protein of unknown function (DUF1479) YIM_RS33140 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS33145 PF17754 MftR C-terminal domain YIM_RS33145 PF00440 Bacterial regulatory proteins, tetR family YIM_RS33150 PF00135 Carboxylesterase family YIM_RS33155 PF07690 Major Facilitator Superfamily YIM_RS33185 PF13732 Domain of unknown function (DUF4162) YIM_RS33185 PF00005 ABC transporter YIM_RS33195 PF08241 Methyltransferase domain YIM_RS33200 PF00444 Ribosomal protein L36 YIM_RS33205 PF01497 Periplasmic binding protein YIM_RS33210 PF01032 FecCD transport family YIM_RS33215 PF01032 FecCD transport family YIM_RS33220 PF00005 ABC transporter YIM_RS33230 PF00171 Aldehyde dehydrogenase family YIM_RS33235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YIM_RS33235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YIM_RS33235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YIM_RS33240 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YIM_RS33250 PF00294 pfkB family carbohydrate kinase YIM_RS33250 PF01467 Cytidylyltransferase-like YIM_RS33255 PF13580 SIS domain YIM_RS33270 PF02543 Carbamoyltransferase N-terminus YIM_RS33270 PF16861 Carbamoyltransferase C-terminus YIM_RS33275 PF13439 Glycosyltransferase Family 4 YIM_RS33275 PF00534 Glycosyl transferases group 1 YIM_RS33285 PF00535 Glycosyl transferase family 2 YIM_RS33290 PF00535 Glycosyl transferase family 2 YIM_RS33300 PF16363 GDP-mannose 4,6 dehydratase YIM_RS33305 PF05175 Methyltransferase small domain YIM_RS33305 PF17827 PrmC N-terminal domain YIM_RS33330 PF05067 Manganese containing catalase YIM_RS33335 PF16363 GDP-mannose 4,6 dehydratase YIM_RS33360 PF03952 Enolase, N-terminal domain YIM_RS33360 PF00113 Enolase, C-terminal TIM barrel domain YIM_RS33370 PF04075 F420H(2)-dependent quinone reductase YIM_RS33395 PF00106 short chain dehydrogenase YIM_RS33400 PF00069 Protein kinase domain YIM_RS33405 PF07883 Cupin domain YIM_RS33405 PF05899 Protein of unknown function (DUF861) YIM_RS33410 PF13556 PucR C-terminal helix-turn-helix domain YIM_RS33410 PF17853 GGDEF-like domain YIM_RS33410 PF05651 Putative sugar diacid recognition YIM_RS33415 PF13193 AMP-binding enzyme C-terminal domain YIM_RS33415 PF00501 AMP-binding enzyme YIM_RS33420 PF01476 LysM domain YIM_RS33420 PF00756 Putative esterase YIM_RS33440 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS33440 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS33440 PF08659 KR domain YIM_RS33440 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS33440 PF00698 Acyl transferase domain YIM_RS33440 PF00550 Phosphopantetheine attachment site YIM_RS33440 PF14765 Polyketide synthase dehydratase YIM_RS33445 PF00501 AMP-binding enzyme YIM_RS33450 PF00756 Putative esterase YIM_RS33450 PF01476 LysM domain YIM_RS33455 PF07690 Major Facilitator Superfamily YIM_RS33460 PF03176 MMPL family YIM_RS33475 PF01738 Dienelactone hydrolase family YIM_RS33525 PF00144 Beta-lactamase YIM_RS33530 PF12706 Beta-lactamase superfamily domain YIM_RS33530 PF00753 Metallo-beta-lactamase superfamily YIM_RS33545 PF01494 FAD binding domain YIM_RS33550 PF08359 YsiA-like protein, C-terminal region YIM_RS33550 PF00440 Bacterial regulatory proteins, tetR family YIM_RS33560 PF00144 Beta-lactamase YIM_RS33565 PF00005 ABC transporter YIM_RS33605 PF17668 Acetyltransferase (GNAT) domain YIM_RS33605 PF13530 Sterol carrier protein domain YIM_RS33620 PF00486 Transcriptional regulatory protein, C terminal YIM_RS33620 PF00931 NB-ARC domain YIM_RS33620 PF03704 Bacterial transcriptional activator domain YIM_RS33655 PF01594 AI-2E family transporter YIM_RS33660 PF03176 MMPL family YIM_RS33670 PF00186 Dihydrofolate reductase YIM_RS33675 PF00303 Thymidylate synthase YIM_RS33680 PF07690 Major Facilitator Superfamily YIM_RS33705 PF17933 Tetracyclin repressor-like, C-terminal domain YIM_RS33705 PF00440 Bacterial regulatory proteins, tetR family YIM_RS33720 PF00486 Transcriptional regulatory protein, C terminal YIM_RS33720 PF03704 Bacterial transcriptional activator domain YIM_RS33720 PF00931 NB-ARC domain YIM_RS33730 PF06441 Epoxide hydrolase N terminus YIM_RS33735 PF13411 MerR HTH family regulatory protein YIM_RS33745 PF04760 Translation initiation factor IF-2, N-terminal region YIM_RS33745 PF00009 Elongation factor Tu GTP binding domain YIM_RS33745 PF11987 Translation-initiation factor 2 YIM_RS33765 PF17862 AAA+ lid domain YIM_RS33765 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS33765 PF01434 Peptidase family M41 YIM_RS33765 PF06480 FtsH Extracellular YIM_RS33790 PF07730 Histidine kinase YIM_RS33790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS33795 PF00072 Response regulator receiver domain YIM_RS33795 PF00196 Bacterial regulatory proteins, luxR family YIM_RS33800 PF12697 Alpha/beta hydrolase family YIM_RS33805 PF01070 FMN-dependent dehydrogenase YIM_RS33815 PF07739 TipAS antibiotic-recognition domain YIM_RS33815 PF13411 MerR HTH family regulatory protein YIM_RS33825 PF08031 Berberine and berberine like YIM_RS33825 PF01565 FAD binding domain YIM_RS33830 PF00392 Bacterial regulatory proteins, gntR family YIM_RS33840 PF04978 Protein of unknown function (DUF664) YIM_RS33845 PF00561 alpha/beta hydrolase fold YIM_RS33860 PF00144 Beta-lactamase YIM_RS33880 PF00440 Bacterial regulatory proteins, tetR family YIM_RS33880 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS33885 PF13847 Methyltransferase domain YIM_RS33900 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_RS33900 PF02811 PHP domain YIM_RS33900 PF14579 Helix-hairpin-helix motif YIM_RS33900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_RS33915 PF07730 Histidine kinase YIM_RS33915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS33920 PF00196 Bacterial regulatory proteins, luxR family YIM_RS33920 PF00072 Response regulator receiver domain YIM_RS33940 PF07690 Major Facilitator Superfamily YIM_RS33945 PF00196 Bacterial regulatory proteins, luxR family YIM_RS33955 PF05139 Erythromycin esterase YIM_RS33965 PF00144 Beta-lactamase YIM_RS33970 PF04542 Sigma-70 region 2 YIM_RS33970 PF12680 SnoaL-like domain YIM_RS33970 PF08281 Sigma-70, region 4 YIM_RS33975 PF14759 Reductase C-terminal YIM_RS33975 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS33990 PF00355 Rieske [2Fe-2S] domain YIM_RS33990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YIM_RS34005 PF00107 Zinc-binding dehydrogenase YIM_RS34005 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS34015 PF00135 Carboxylesterase family YIM_RS34035 PF07690 Major Facilitator Superfamily YIM_RS34045 PF01757 Acyltransferase family YIM_RS34055 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS34055 PF00672 HAMP domain YIM_RS34055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS34060 PF00486 Transcriptional regulatory protein, C terminal YIM_RS34060 PF00072 Response regulator receiver domain YIM_RS34075 PF12833 Helix-turn-helix domain YIM_RS34075 PF01965 DJ-1/PfpI family YIM_RS34080 PF01494 FAD binding domain YIM_RS34085 PF00440 Bacterial regulatory proteins, tetR family YIM_RS34095 PF13977 BetI-type transcriptional repressor, C-terminal YIM_RS34095 PF00440 Bacterial regulatory proteins, tetR family YIM_RS34105 PF00326 Prolyl oligopeptidase family YIM_RS34115 PF01638 HxlR-like helix-turn-helix YIM_RS34120 PF00296 Luciferase-like monooxygenase YIM_RS34150 PF00144 Beta-lactamase YIM_RS34160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YIM_RS34160 PF12833 Helix-turn-helix domain YIM_RS34170 PF07969 Amidohydrolase family YIM_RS34175 PF00083 Sugar (and other) transporter YIM_RS34185 PF10503 Esterase PHB depolymerase YIM_RS34190 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS34190 PF17996 Carbohydrate esterase 2 N-terminal YIM_RS34210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS34210 PF03466 LysR substrate binding domain YIM_RS34220 PF13199 Glycosyl hydrolase family 66 YIM_RS34220 PF16990 Carbohydrate binding module (family 35) YIM_RS34220 PF03422 Carbohydrate binding module (family 6) YIM_RS34245 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS34245 PF00550 Phosphopantetheine attachment site YIM_RS34245 PF08659 KR domain YIM_RS34245 PF14765 Polyketide synthase dehydratase YIM_RS34245 PF08990 Erythronolide synthase docking YIM_RS34245 PF00698 Acyl transferase domain YIM_RS34245 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS34245 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS34245 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS34260 PF00005 ABC transporter YIM_RS34260 PF13732 Domain of unknown function (DUF4162) YIM_RS34280 PF03704 Bacterial transcriptional activator domain YIM_RS34280 PF00931 NB-ARC domain YIM_RS34280 PF00486 Transcriptional regulatory protein, C terminal YIM_RS34305 PF02627 Carboxymuconolactone decarboxylase family YIM_RS34310 PF08281 Sigma-70, region 4 YIM_RS34310 PF04542 Sigma-70 region 2 YIM_RS34320 PF00999 Sodium/hydrogen exchanger family YIM_RS34350 PF00392 Bacterial regulatory proteins, gntR family YIM_RS34350 PF07729 FCD domain YIM_RS34355 PF00202 Aminotransferase class-III YIM_RS34360 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS34360 PF00440 Bacterial regulatory proteins, tetR family YIM_RS34385 PF03551 Transcriptional regulator PadR-like family YIM_RS34395 PF00324 Amino acid permease YIM_RS34400 PF00072 Response regulator receiver domain YIM_RS34400 PF00486 Transcriptional regulatory protein, C terminal YIM_RS34405 PF00672 HAMP domain YIM_RS34405 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS34405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS34425 PF00440 Bacterial regulatory proteins, tetR family YIM_RS34430 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) YIM_RS34455 PF07859 alpha/beta hydrolase fold YIM_RS34460 PF04954 Siderophore-interacting protein YIM_RS34460 PF00664 ABC transporter transmembrane region YIM_RS34460 PF08021 Siderophore-interacting FAD-binding domain YIM_RS34460 PF00005 ABC transporter YIM_RS34465 PF00005 ABC transporter YIM_RS34480 PF00440 Bacterial regulatory proteins, tetR family YIM_RS34510 PF01580 FtsK/SpoIIIE family YIM_RS34515 PF01494 FAD binding domain YIM_RS34525 PF01494 FAD binding domain YIM_RS34530 PF01734 Patatin-like phospholipase YIM_RS34550 PF00892 EamA-like transporter family YIM_RS34555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS34555 PF03466 LysR substrate binding domain YIM_RS34570 PF03704 Bacterial transcriptional activator domain YIM_RS34570 PF00486 Transcriptional regulatory protein, C terminal YIM_RS34570 PF00931 NB-ARC domain YIM_RS34580 PF00005 ABC transporter YIM_RS34590 PF01546 Peptidase family M20/M25/M40 YIM_RS34590 PF07687 Peptidase dimerisation domain YIM_RS34605 PF03527 RHS protein YIM_RS34605 PF05593 RHS Repeat YIM_RS34625 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS34625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS34625 PF00672 HAMP domain YIM_RS34630 PF00486 Transcriptional regulatory protein, C terminal YIM_RS34630 PF00072 Response regulator receiver domain YIM_RS34635 PF07690 Major Facilitator Superfamily YIM_RS34645 PF00682 HMGL-like YIM_RS34650 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS34655 PF02515 CoA-transferase family III YIM_RS34660 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS34665 PF00501 AMP-binding enzyme YIM_RS34665 PF13193 AMP-binding enzyme C-terminal domain YIM_RS34670 PF03060 Nitronate monooxygenase YIM_RS34690 PF01979 Amidohydrolase family YIM_RS34710 PF00005 ABC transporter YIM_RS34715 PF00005 ABC transporter YIM_RS34715 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_RS34725 PF02653 Branched-chain amino acid transport system / permease component YIM_RS34730 PF13458 Periplasmic binding protein YIM_RS34735 PF02515 CoA-transferase family III YIM_RS34740 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS34750 PF03972 MmgE/PrpD family YIM_RS34760 PF06722 Protein of unknown function (DUF1205) YIM_RS34775 PF00356 Bacterial regulatory proteins, lacI family YIM_RS34780 PF00544 Pectate lyase YIM_RS34790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS34795 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS34800 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS34810 PF02082 Transcriptional regulator YIM_RS34815 PF08281 Sigma-70, region 4 YIM_RS34815 PF04542 Sigma-70 region 2 YIM_RS34855 PF03466 LysR substrate binding domain YIM_RS34855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS34870 PF01965 DJ-1/PfpI family YIM_RS34875 PF00583 Acetyltransferase (GNAT) family YIM_RS34880 PF00574 Clp protease YIM_RS34890 PF00440 Bacterial regulatory proteins, tetR family YIM_RS34895 PF00563 EAL domain YIM_RS34895 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS34895 PF08447 PAS fold YIM_RS34895 PF08448 PAS fold YIM_RS34905 PF00067 Cytochrome P450 YIM_RS34930 PF01494 FAD binding domain YIM_RS34935 PF01614 Bacterial transcriptional regulator YIM_RS34935 PF09339 IclR helix-turn-helix domain YIM_RS34945 PF04542 Sigma-70 region 2 YIM_RS34945 PF08281 Sigma-70, region 4 YIM_RS34960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS34965 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_RS34995 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_RS34995 PF01799 [2Fe-2S] binding domain YIM_RS34995 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS35000 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_RS35000 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_RS35010 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_RS35010 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_RS35020 PF04978 Protein of unknown function (DUF664) YIM_RS35025 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase YIM_RS35050 PF03965 Penicillinase repressor YIM_RS35065 PF00392 Bacterial regulatory proteins, gntR family YIM_RS35075 PF00364 Biotin-requiring enzyme YIM_RS35075 PF00561 alpha/beta hydrolase fold YIM_RS35080 PF02780 Transketolase, C-terminal domain YIM_RS35080 PF02779 Transketolase, pyrimidine binding domain YIM_RS35085 PF00676 Dehydrogenase E1 component YIM_RS35090 PF01513 ATP-NAD kinase YIM_RS35095 PF00106 short chain dehydrogenase YIM_RS35120 PF00271 Helicase conserved C-terminal domain YIM_RS35120 PF16124 RecQ zinc-binding YIM_RS35120 PF00570 HRDC domain YIM_RS35120 PF09382 RQC domain YIM_RS35120 PF00270 DEAD/DEAH box helicase YIM_RS35125 PF07971 Glycosyl hydrolase family 92 YIM_RS35125 PF17678 Glycosyl hydrolase family 92 N-terminal domain YIM_RS35145 PF00664 ABC transporter transmembrane region YIM_RS35145 PF00005 ABC transporter YIM_RS35150 PF00664 ABC transporter transmembrane region YIM_RS35150 PF00005 ABC transporter YIM_RS35160 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS35170 PF00005 ABC transporter YIM_RS35175 PF01032 FecCD transport family YIM_RS35180 PF13649 Methyltransferase domain YIM_RS35190 PF00440 Bacterial regulatory proteins, tetR family YIM_RS35190 PF13977 BetI-type transcriptional repressor, C-terminal YIM_RS35195 PF02817 e3 binding domain YIM_RS35195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_RS35195 PF00364 Biotin-requiring enzyme YIM_RS35200 PF02779 Transketolase, pyrimidine binding domain YIM_RS35200 PF02780 Transketolase, C-terminal domain YIM_RS35205 PF00676 Dehydrogenase E1 component YIM_RS35210 PF01037 Lrp/AsnC ligand binding domain YIM_RS35210 PF13404 AsnC-type helix-turn-helix domain YIM_RS35220 PF00106 short chain dehydrogenase YIM_RS35230 PF00809 Pterin binding enzyme YIM_RS35235 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_RS35235 PF06974 Protein of unknown function (DUF1298) YIM_RS35240 PF00561 alpha/beta hydrolase fold YIM_RS35255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YIM_RS35255 PF07685 CobB/CobQ-like glutamine amidotransferase domain YIM_RS35260 PF03186 CobD/Cbib protein YIM_RS35265 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YIM_RS35270 PF02277 Phosphoribosyltransferase YIM_RS35275 PF02654 Cobalamin-5-phosphate synthase YIM_RS35285 PF00155 Aminotransferase class I and II YIM_RS35290 PF07685 CobB/CobQ-like glutamine amidotransferase domain YIM_RS35290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YIM_RS35300 PF07728 AAA domain (dynein-related subfamily) YIM_RS35300 PF13519 von Willebrand factor type A domain YIM_RS35300 PF17863 AAA lid domain YIM_RS35305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS35310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS35320 PF02571 Precorrin-6x reductase CbiJ/CobK YIM_RS35325 PF14896 EmbC C-terminal domain YIM_RS35325 PF17689 Arabinosyltransferase concanavalin like domain YIM_RS35325 PF04602 Mycobacterial cell wall arabinan synthesis protein YIM_RS35330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS35335 PF02570 Precorrin-8X methylmutase YIM_RS35340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_RS35340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_RS35345 PF00005 ABC transporter YIM_RS35355 PF01381 Helix-turn-helix YIM_RS35365 PF02514 CobN/Magnesium Chelatase YIM_RS35390 PF01022 Bacterial regulatory protein, arsR family YIM_RS35395 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS35400 PF03633 Glycosyl hydrolase family 65, C-terminal domain YIM_RS35400 PF03632 Glycosyl hydrolase family 65 central catalytic domain YIM_RS35400 PF03636 Glycosyl hydrolase family 65, N-terminal domain YIM_RS35415 PF02541 Ppx/GppA phosphatase family YIM_RS35430 PF03717 Penicillin-binding Protein dimerisation domain YIM_RS35430 PF00905 Penicillin binding protein transpeptidase domain YIM_RS35440 PF01795 MraW methylase family YIM_RS35445 PF02381 MraZ protein, putative antitoxin-like YIM_RS35470 PF07726 ATPase family associated with various cellular activities (AAA) YIM_RS35470 PF17863 AAA lid domain YIM_RS35480 PF01841 Transglutaminase-like superfamily YIM_RS35480 PF13559 Domain of unknown function (DUF4129) YIM_RS35480 PF11992 Domain of unknown function (DUF3488) YIM_RS35490 PF11799 impB/mucB/samB family C-terminal domain YIM_RS35490 PF00817 impB/mucB/samB family YIM_RS35495 PF00891 O-methyltransferase domain YIM_RS35500 PF10609 NUBPL iron-transfer P-loop NTPase YIM_RS35500 PF01883 Iron-sulfur cluster assembly protein YIM_RS35505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YIM_RS35505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_RS35510 PF00962 Adenosine/AMP deaminase YIM_RS35515 PF13302 Acetyltransferase (GNAT) domain YIM_RS35520 PF01180 Dihydroorotate dehydrogenase YIM_RS35535 PF04012 PspA/IM30 family YIM_RS35545 PF00994 Probable molybdopterin binding domain YIM_RS35545 PF18146 Damage-inducible protein CinA KH domain YIM_RS35545 PF02464 Competence-damaged protein YIM_RS35550 PF01066 CDP-alcohol phosphatidyltransferase YIM_RS35555 PF04055 Radical SAM superfamily YIM_RS35555 PF18693 TRAM domain YIM_RS35555 PF00919 Uncharacterized protein family UPF0004 YIM_RS35560 PF00583 Acetyltransferase (GNAT) family YIM_RS35580 PF00881 Nitroreductase family YIM_RS35585 PF09397 Ftsk gamma domain YIM_RS35585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YIM_RS35585 PF01580 FtsK/SpoIIIE family YIM_RS35585 PF17854 FtsK alpha domain YIM_RS35595 PF00892 EamA-like transporter family YIM_RS35610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YIM_RS35610 PF17770 Ribonuclease J C-terminal domain YIM_RS35610 PF12706 Beta-lactamase superfamily domain YIM_RS35615 PF00701 Dihydrodipicolinate synthetase family YIM_RS35620 PF03793 PASTA domain YIM_RS35620 PF00069 Protein kinase domain YIM_RS35625 PF01566 Natural resistance-associated macrophage protein YIM_RS35625 PF03358 NADPH-dependent FMN reductase YIM_RS35635 PF02511 Thymidylate synthase complementing protein YIM_RS35650 PF13191 AAA ATPase domain YIM_RS35650 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS35655 PF03358 NADPH-dependent FMN reductase YIM_RS35660 PF07690 Major Facilitator Superfamily YIM_RS35665 PF06224 Winged helix DNA-binding domain YIM_RS35690 PF05173 Dihydrodipicolinate reductase, C-terminus YIM_RS35690 PF01113 Dihydrodipicolinate reductase, N-terminus YIM_RS35695 PF00675 Insulinase (Peptidase family M16) YIM_RS35695 PF05193 Peptidase M16 inactive domain YIM_RS35700 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YIM_RS35700 PF00575 S1 RNA binding domain YIM_RS35700 PF01138 3' exoribonuclease family, domain 1 YIM_RS35700 PF00013 KH domain YIM_RS35705 PF00312 Ribosomal protein S15 YIM_RS35720 PF01687 Riboflavin kinase YIM_RS35720 PF06574 FAD synthetase YIM_RS35725 PF16198 tRNA pseudouridylate synthase B C-terminal domain YIM_RS35725 PF09142 tRNA Pseudouridine synthase II, C terminal YIM_RS35725 PF01509 TruB family pseudouridylate synthase (N terminal domain) YIM_RS35730 PF07690 Major Facilitator Superfamily YIM_RS35765 PF01368 DHH family YIM_RS35765 PF02272 DHHA1 domain YIM_RS35780 PF07690 Major Facilitator Superfamily YIM_RS35790 PF02033 Ribosome-binding factor A YIM_RS35800 PF04760 Translation initiation factor IF-2, N-terminal region YIM_RS35800 PF00009 Elongation factor Tu GTP binding domain YIM_RS35800 PF11987 Translation-initiation factor 2 YIM_RS35810 PF08529 NusA N-terminal domain YIM_RS35810 PF13184 NusA-like KH domain YIM_RS35815 PF02576 RimP N-terminal domain YIM_RS35815 PF17384 RimP C-terminal SH3 domain YIM_RS35830 PF00266 Aminotransferase class-V YIM_RS35865 PF00005 ABC transporter YIM_RS35870 PF07730 Histidine kinase YIM_RS35875 PF00196 Bacterial regulatory proteins, luxR family YIM_RS35875 PF00072 Response regulator receiver domain YIM_RS35880 PF01638 HxlR-like helix-turn-helix YIM_RS35885 PF13460 NAD(P)H-binding YIM_RS35890 PF00440 Bacterial regulatory proteins, tetR family YIM_RS35900 PF13191 AAA ATPase domain YIM_RS35900 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS35910 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_RS35910 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_RS35915 PF00248 Aldo/keto reductase family YIM_RS35925 PF00005 ABC transporter YIM_RS35925 PF13732 Domain of unknown function (DUF4162) YIM_RS35935 PF05690 Thiazole biosynthesis protein ThiG YIM_RS35945 PF00294 pfkB family carbohydrate kinase YIM_RS35950 PF02965 Vitamin B12 dependent methionine synthase, activation domain YIM_RS35950 PF02574 Homocysteine S-methyltransferase YIM_RS35950 PF00809 Pterin binding enzyme YIM_RS35950 PF02607 B12 binding domain YIM_RS35950 PF02310 B12 binding domain YIM_RS35955 PF02219 Methylenetetrahydrofolate reductase YIM_RS35970 PF03176 MMPL family YIM_RS35980 PF11774 Lsr2 YIM_RS35995 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_RS36010 PF00753 Metallo-beta-lactamase superfamily YIM_RS36015 PF01494 FAD binding domain YIM_RS36025 PF13732 Domain of unknown function (DUF4162) YIM_RS36025 PF00005 ABC transporter YIM_RS36030 PF10397 Adenylosuccinate lyase C-terminus YIM_RS36030 PF00206 Lyase YIM_RS36035 PF07995 Glucose / Sorbosone dehydrogenase YIM_RS36045 PF07690 Major Facilitator Superfamily YIM_RS36055 PF13499 EF-hand domain pair YIM_RS36060 PF01546 Peptidase family M20/M25/M40 YIM_RS36080 PF01593 Flavin containing amine oxidoreductase YIM_RS36085 PF13193 AMP-binding enzyme C-terminal domain YIM_RS36085 PF00501 AMP-binding enzyme YIM_RS36085 PF16177 Acetyl-coenzyme A synthetase N-terminus YIM_RS36095 PF00075 RNase H YIM_RS36105 PF10503 Esterase PHB depolymerase YIM_RS36145 PF01261 Xylose isomerase-like TIM barrel YIM_RS36150 PF00480 ROK family YIM_RS36175 PF13537 Glutamine amidotransferase domain YIM_RS36175 PF00733 Asparagine synthase YIM_RS36195 PF13298 DNA polymerase Ligase (LigD) YIM_RS36195 PF01068 ATP dependent DNA ligase domain YIM_RS36195 PF04679 ATP dependent DNA ligase C terminal region YIM_RS36215 PF01638 HxlR-like helix-turn-helix YIM_RS36230 PF16483 Beta-1,3-glucanase YIM_RS36230 PF00652 Ricin-type beta-trefoil lectin domain YIM_RS36245 PF00732 GMC oxidoreductase YIM_RS36245 PF05199 GMC oxidoreductase YIM_RS36255 PF03466 LysR substrate binding domain YIM_RS36255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS36260 PF00753 Metallo-beta-lactamase superfamily YIM_RS36265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS36265 PF03466 LysR substrate binding domain YIM_RS36280 PF00743 Flavin-binding monooxygenase-like YIM_RS36295 PF02983 Alpha-lytic protease prodomain YIM_RS36300 PF00072 Response regulator receiver domain YIM_RS36300 PF00196 Bacterial regulatory proteins, luxR family YIM_RS36325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS36325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS36330 PF07478 D-ala D-ala ligase C-terminus YIM_RS36330 PF01820 D-ala D-ala ligase N-terminus YIM_RS36335 PF01427 D-ala-D-ala dipeptidase YIM_RS36345 PF04101 Glycosyltransferase family 28 C-terminal domain YIM_RS36345 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_RS36350 PF00672 HAMP domain YIM_RS36350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS36350 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS36355 PF00486 Transcriptional regulatory protein, C terminal YIM_RS36355 PF00072 Response regulator receiver domain YIM_RS36365 PF05368 NmrA-like family YIM_RS36375 PF08281 Sigma-70, region 4 YIM_RS36375 PF12680 SnoaL-like domain YIM_RS36375 PF04542 Sigma-70 region 2 YIM_RS36380 PF00999 Sodium/hydrogen exchanger family YIM_RS36385 PF09924 Uncharacterised conserved protein (DUF2156) YIM_RS36390 PF00756 Putative esterase YIM_RS36395 PF07730 Histidine kinase YIM_RS36400 PF00072 Response regulator receiver domain YIM_RS36400 PF00196 Bacterial regulatory proteins, luxR family YIM_RS36415 PF00664 ABC transporter transmembrane region YIM_RS36415 PF00005 ABC transporter YIM_RS36425 PF00296 Luciferase-like monooxygenase YIM_RS36445 PF12680 SnoaL-like domain YIM_RS36455 PF00561 alpha/beta hydrolase fold YIM_RS36465 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS36470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_RS36475 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YIM_RS36475 PF00890 FAD binding domain YIM_RS36485 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS36490 PF00890 FAD binding domain YIM_RS36495 PF00248 Aldo/keto reductase family YIM_RS36505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS36505 PF00005 ABC transporter YIM_RS36510 PF00005 ABC transporter YIM_RS36510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_RS36515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_RS36520 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS36520 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_RS36525 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS36530 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS36530 PF00970 Oxidoreductase FAD-binding domain YIM_RS36530 PF00175 Oxidoreductase NAD-binding domain YIM_RS36540 PF00355 Rieske [2Fe-2S] domain YIM_RS36550 PF04205 FMN-binding domain YIM_RS36550 PF00890 FAD binding domain YIM_RS36555 PF00106 short chain dehydrogenase YIM_RS36560 PF00296 Luciferase-like monooxygenase YIM_RS36565 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS36565 PF14759 Reductase C-terminal YIM_RS36575 PF00067 Cytochrome P450 YIM_RS36590 PF07859 alpha/beta hydrolase fold YIM_RS36595 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS36600 PF00743 Flavin-binding monooxygenase-like YIM_RS36605 PF01614 Bacterial transcriptional regulator YIM_RS36610 PF00440 Bacterial regulatory proteins, tetR family YIM_RS36615 PF02515 CoA-transferase family III YIM_RS36625 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS36625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS36625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS36630 PF00392 Bacterial regulatory proteins, gntR family YIM_RS36630 PF07729 FCD domain YIM_RS36635 PF00106 short chain dehydrogenase YIM_RS36655 PF00459 Inositol monophosphatase family YIM_RS36660 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_RS36675 PF00107 Zinc-binding dehydrogenase YIM_RS36675 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS36685 PF00144 Beta-lactamase YIM_RS36705 PF00296 Luciferase-like monooxygenase YIM_RS36710 PF00067 Cytochrome P450 YIM_RS36720 PF07690 Major Facilitator Superfamily YIM_RS36725 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain YIM_RS36725 PF04616 Glycosyl hydrolases family 43 YIM_RS36730 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain YIM_RS36730 PF08531 Alpha-L-rhamnosidase N-terminal domain YIM_RS36730 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain YIM_RS36730 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain YIM_RS36745 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS36745 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS36745 PF14310 Fibronectin type III-like domain YIM_RS36750 PF14310 Fibronectin type III-like domain YIM_RS36750 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS36750 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS36755 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 YIM_RS36755 PF00703 Glycosyl hydrolases family 2 YIM_RS36755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YIM_RS36755 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_RS36755 PF16355 Domain of unknown function (DUF4982) YIM_RS36760 PF07690 Major Facilitator Superfamily YIM_RS36765 PF00232 Glycosyl hydrolase family 1 YIM_RS36790 PF00400 WD domain, G-beta repeat YIM_RS36790 PF00069 Protein kinase domain YIM_RS36795 PF00069 Protein kinase domain YIM_RS36795 PF00400 WD domain, G-beta repeat YIM_RS36830 PF03704 Bacterial transcriptional activator domain YIM_RS36830 PF00931 NB-ARC domain YIM_RS36830 PF00486 Transcriptional regulatory protein, C terminal YIM_RS36895 PF00580 UvrD/REP helicase N-terminal domain YIM_RS36895 PF13361 UvrD-like helicase C-terminal domain YIM_RS36900 PF02463 RecF/RecN/SMC N terminal domain YIM_RS36905 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) YIM_RS36905 PF01348 Type II intron maturase YIM_RS36925 PF00005 ABC transporter YIM_RS36935 PF00561 alpha/beta hydrolase fold YIM_RS36955 PF01055 Glycosyl hydrolases family 31 YIM_RS36960 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS36965 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS36975 PF00356 Bacterial regulatory proteins, lacI family YIM_RS36980 PF07691 PA14 domain YIM_RS36980 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS36980 PF14310 Fibronectin type III-like domain YIM_RS36980 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS37025 PF00723 Glycosyl hydrolases family 15 YIM_RS37025 PF09137 Glucodextranase, domain N YIM_RS37040 PF00465 Iron-containing alcohol dehydrogenase YIM_RS37060 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS37070 PF00118 TCP-1/cpn60 chaperonin family YIM_RS37075 PF00679 Elongation factor G C-terminus YIM_RS37075 PF00009 Elongation factor Tu GTP binding domain YIM_RS37075 PF03764 Elongation factor G, domain IV YIM_RS37085 PF00067 Cytochrome P450 YIM_RS37090 PF00067 Cytochrome P450 YIM_RS37115 PF03737 Aldolase/RraA YIM_RS37130 PF01996 F420-0:Gamma-glutamyl ligase YIM_RS37130 PF00881 Nitroreductase family YIM_RS37155 PF01209 ubiE/COQ5 methyltransferase family YIM_RS37170 PF01047 MarR family YIM_RS37195 PF01966 HD domain YIM_RS37210 PF00005 ABC transporter YIM_RS37215 PF01032 FecCD transport family YIM_RS37220 PF02224 Cytidylate kinase YIM_RS37220 PF02569 Pantoate-beta-alanine ligase YIM_RS37225 PF00561 alpha/beta hydrolase fold YIM_RS37230 PF00561 alpha/beta hydrolase fold YIM_RS37235 PF03795 YCII-related domain YIM_RS37240 PF08281 Sigma-70, region 4 YIM_RS37240 PF04542 Sigma-70 region 2 YIM_RS37245 PF06722 Protein of unknown function (DUF1205) YIM_RS37255 PF02824 TGS domain YIM_RS37255 PF03129 Anticodon binding domain YIM_RS37255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_RS37255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YIM_RS37270 PF04012 PspA/IM30 family YIM_RS37275 PF07690 Major Facilitator Superfamily YIM_RS37295 PF14759 Reductase C-terminal YIM_RS37295 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS37300 PF00067 Cytochrome P450 YIM_RS37305 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS37330 PF03358 NADPH-dependent FMN reductase YIM_RS37335 PF00392 Bacterial regulatory proteins, gntR family YIM_RS37335 PF07729 FCD domain YIM_RS37340 PF02515 CoA-transferase family III YIM_RS37345 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_RS37370 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_RS37370 PF00440 Bacterial regulatory proteins, tetR family YIM_RS37380 PF00764 Arginosuccinate synthase YIM_RS37390 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS37390 PF00107 Zinc-binding dehydrogenase YIM_RS37405 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_RS37420 PF01047 MarR family YIM_RS37435 PF00155 Aminotransferase class I and II YIM_RS37435 PF00392 Bacterial regulatory proteins, gntR family YIM_RS37450 PF03704 Bacterial transcriptional activator domain YIM_RS37450 PF00931 NB-ARC domain YIM_RS37450 PF00486 Transcriptional regulatory protein, C terminal YIM_RS37475 PF00005 ABC transporter YIM_RS37475 PF00664 ABC transporter transmembrane region YIM_RS37480 PF10502 Signal peptidase, peptidase S26 YIM_RS37485 PF07730 Histidine kinase YIM_RS37490 PF00196 Bacterial regulatory proteins, luxR family YIM_RS37490 PF00072 Response regulator receiver domain YIM_RS37495 PF01565 FAD binding domain YIM_RS37495 PF08031 Berberine and berberine like YIM_RS37510 PF01047 MarR family YIM_RS37530 PF00135 Carboxylesterase family YIM_RS37555 PF07690 Major Facilitator Superfamily YIM_RS37560 PF13378 Enolase C-terminal domain-like YIM_RS37560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS37565 PF01081 KDPG and KHG aldolase YIM_RS37575 PF01614 Bacterial transcriptional regulator YIM_RS37575 PF09339 IclR helix-turn-helix domain YIM_RS37585 PF00561 alpha/beta hydrolase fold YIM_RS37615 PF01022 Bacterial regulatory protein, arsR family YIM_RS37635 PF01451 Low molecular weight phosphotyrosine protein phosphatase YIM_RS37650 PF00484 Carbonic anhydrase YIM_RS37655 PF01740 STAS domain YIM_RS37655 PF00916 Sulfate permease family YIM_RS37670 PF00392 Bacterial regulatory proteins, gntR family YIM_RS37675 PF00899 ThiF family YIM_RS37690 PF03664 Glycosyl hydrolase family 62 YIM_RS37690 PF00652 Ricin-type beta-trefoil lectin domain YIM_RS37720 PF00561 alpha/beta hydrolase fold YIM_RS37725 PF07690 Major Facilitator Superfamily YIM_RS37750 PF03435 Saccharopine dehydrogenase NADP binding domain YIM_RS37750 PF16653 Saccharopine dehydrogenase C-terminal domain YIM_RS37755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_RS37755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_RS37770 PF08241 Methyltransferase domain YIM_RS37815 PF10410 DnaB-helicase binding domain of primase YIM_RS37815 PF01807 CHC2 zinc finger YIM_RS37815 PF08275 DNA primase catalytic core, N-terminal domain YIM_RS37815 PF13662 Toprim domain YIM_RS37815 PF08278 DNA primase DnaG DnaB-binding YIM_RS37820 PF08281 Sigma-70, region 4 YIM_RS37820 PF04542 Sigma-70 region 2 YIM_RS37820 PF12680 SnoaL-like domain YIM_RS37825 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS37830 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS37835 PF02627 Carboxymuconolactone decarboxylase family YIM_RS37840 PF07690 Major Facilitator Superfamily YIM_RS37855 PF13286 Phosphohydrolase-associated domain YIM_RS37855 PF01966 HD domain YIM_RS37870 PF00072 Response regulator receiver domain YIM_RS37870 PF00196 Bacterial regulatory proteins, luxR family YIM_RS37875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS37875 PF07730 Histidine kinase YIM_RS37885 PF00005 ABC transporter YIM_RS37890 PF03129 Anticodon binding domain YIM_RS37890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_RS37905 PF01022 Bacterial regulatory protein, arsR family YIM_RS37910 PF01475 Ferric uptake regulator family YIM_RS37935 PF03773 Predicted permease YIM_RS37945 PF01255 Putative undecaprenyl diphosphate synthase YIM_RS37950 PF02565 Recombination protein O C terminal YIM_RS37950 PF11967 Recombination protein O N terminal YIM_RS37970 PF06271 RDD family YIM_RS37985 PF01926 50S ribosome-binding GTPase YIM_RS37985 PF07650 KH domain YIM_RS37990 PF03704 Bacterial transcriptional activator domain YIM_RS37990 PF00486 Transcriptional regulatory protein, C terminal YIM_RS37990 PF00931 NB-ARC domain YIM_RS38000 PF01595 Cyclin M transmembrane N-terminal domain YIM_RS38000 PF03471 Transporter associated domain YIM_RS38000 PF00571 CBS domain YIM_RS38005 PF02130 Uncharacterized protein family UPF0054 YIM_RS38010 PF02562 PhoH-like protein YIM_RS38015 PF01230 HIT domain YIM_RS38020 PF04452 RNA methyltransferase YIM_RS38025 PF00684 DnaJ central domain YIM_RS38025 PF00226 DnaJ domain YIM_RS38025 PF01556 DnaJ C terminal domain YIM_RS38030 PF01628 HrcA protein C terminal domain YIM_RS38035 PF00171 Aldehyde dehydrogenase family YIM_RS38040 PF00202 Aminotransferase class-III YIM_RS38055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YIM_RS38065 PF01979 Amidohydrolase family YIM_RS38085 PF04954 Siderophore-interacting protein YIM_RS38085 PF08021 Siderophore-interacting FAD-binding domain YIM_RS38100 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS38100 PF00440 Bacterial regulatory proteins, tetR family YIM_RS38105 PF01022 Bacterial regulatory protein, arsR family YIM_RS38125 PF03176 MMPL family YIM_RS38130 PF07730 Histidine kinase YIM_RS38130 PF05231 MASE1 YIM_RS38130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS38135 PF00072 Response regulator receiver domain YIM_RS38135 PF00196 Bacterial regulatory proteins, luxR family YIM_RS38140 PF04055 Radical SAM superfamily YIM_RS38145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_RS38145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_RS38155 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_RS38160 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_RS38165 PF00009 Elongation factor Tu GTP binding domain YIM_RS38180 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS38185 PF01337 Barstar (barnase inhibitor) YIM_RS38190 PF00545 ribonuclease YIM_RS38200 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS38200 PF00107 Zinc-binding dehydrogenase YIM_RS38205 PF12697 Alpha/beta hydrolase family YIM_RS38210 PF13520 Amino acid permease YIM_RS38215 PF03060 Nitronate monooxygenase YIM_RS38230 PF00728 Glycosyl hydrolase family 20, catalytic domain YIM_RS38230 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_RS38235 PF01425 Amidase YIM_RS38240 PF03144 Elongation factor Tu domain 2 YIM_RS38240 PF00009 Elongation factor Tu GTP binding domain YIM_RS38240 PF00679 Elongation factor G C-terminus YIM_RS38240 PF06421 GTP-binding protein LepA C-terminus YIM_RS38245 PF03551 Transcriptional regulator PadR-like family YIM_RS38245 PF13847 Methyltransferase domain YIM_RS38280 PF01649 Ribosomal protein S20 YIM_RS38285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_RS38285 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS38300 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS38305 PF10531 SLBB domain YIM_RS38330 PF02645 Uncharacterised protein, DegV family COG1307 YIM_RS38335 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS38340 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS38350 PF01467 Cytidylyltransferase-like YIM_RS38355 PF00271 Helicase conserved C-terminal domain YIM_RS38355 PF00270 DEAD/DEAH box helicase YIM_RS38355 PF16124 RecQ zinc-binding YIM_RS38360 PF00083 Sugar (and other) transporter YIM_RS38365 PF01494 FAD binding domain YIM_RS38370 PF00440 Bacterial regulatory proteins, tetR family YIM_RS38370 PF17926 Tetracyclin repressor-like, C-terminal domain YIM_RS38380 PF00005 ABC transporter YIM_RS38380 PF02687 FtsX-like permease family YIM_RS38380 PF12704 MacB-like periplasmic core domain YIM_RS38390 PF00196 Bacterial regulatory proteins, luxR family YIM_RS38390 PF00072 Response regulator receiver domain YIM_RS38400 PF00696 Amino acid kinase family YIM_RS38400 PF01472 PUA domain YIM_RS38405 PF09269 Domain of unknown function (DUF1967) YIM_RS38405 PF01018 GTP1/OBG YIM_RS38405 PF01926 50S ribosome-binding GTPase YIM_RS38410 PF01016 Ribosomal L27 protein YIM_RS38415 PF00829 Ribosomal prokaryotic L21 protein YIM_RS38420 PF10150 Ribonuclease E/G family YIM_RS38420 PF10150 Ribonuclease E/G family YIM_RS38425 PF00082 Subtilase family YIM_RS38430 PF01061 ABC-2 type transporter YIM_RS38440 PF00005 ABC transporter YIM_RS38455 PF00392 Bacterial regulatory proteins, gntR family YIM_RS38455 PF07729 FCD domain YIM_RS38460 PF07690 Major Facilitator Superfamily YIM_RS38465 PF00334 Nucleoside diphosphate kinase YIM_RS38475 PF01804 Penicillin amidase YIM_RS38490 PF02875 Mur ligase family, glutamate ligase domain YIM_RS38490 PF08245 Mur ligase middle domain YIM_RS38495 PF08241 Methyltransferase domain YIM_RS38515 PF01261 Xylose isomerase-like TIM barrel YIM_RS38530 PF02653 Branched-chain amino acid transport system / permease component YIM_RS38535 PF00005 ABC transporter YIM_RS38540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS38540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS38545 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS38550 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_RS38560 PF10458 Valyl tRNA synthetase tRNA binding arm YIM_RS38560 PF00133 tRNA synthetases class I (I, L, M and V) YIM_RS38560 PF08264 Anticodon-binding domain of tRNA YIM_RS38565 PF00384 Molybdopterin oxidoreductase YIM_RS38565 PF01568 Molydopterin dinucleotide binding domain YIM_RS38595 PF02634 FdhD/NarQ family YIM_RS38615 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_RS38615 PF07724 AAA domain (Cdc48 subfamily) YIM_RS38615 PF06689 ClpX C4-type zinc finger YIM_RS38620 PF00574 Clp protease YIM_RS38625 PF00574 Clp protease YIM_RS38630 PF05697 Bacterial trigger factor protein (TF) YIM_RS38630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YIM_RS38630 PF05698 Bacterial trigger factor protein (TF) C-terminus YIM_RS38645 PF01565 FAD binding domain YIM_RS38645 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding YIM_RS38665 PF00350 Dynamin family YIM_RS38670 PF00350 Dynamin family YIM_RS38690 PF05746 DALR anticodon binding domain YIM_RS38690 PF03485 Arginyl tRNA synthetase N terminal domain YIM_RS38690 PF00750 tRNA synthetases class I (R) YIM_RS38735 PF09397 Ftsk gamma domain YIM_RS38735 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YIM_RS38735 PF01580 FtsK/SpoIIIE family YIM_RS38735 PF17854 FtsK alpha domain YIM_RS38760 PF00293 NUDIX domain YIM_RS38780 PF00296 Luciferase-like monooxygenase YIM_RS38790 PF00005 ABC transporter YIM_RS38810 PF05958 tRNA (Uracil-5-)-methyltransferase YIM_RS38810 PF01938 TRAM domain YIM_RS38815 PF00877 NlpC/P60 family YIM_RS38815 PF01476 LysM domain YIM_RS38815 PF08239 Bacterial SH3 domain YIM_RS38825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_RS38825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YIM_RS38825 PF06827 Zinc finger found in FPG and IleRS YIM_RS38830 PF02502 Ribose/Galactose Isomerase YIM_RS38845 PF07690 Major Facilitator Superfamily YIM_RS38845 PF00083 Sugar (and other) transporter YIM_RS38850 PF01323 DSBA-like thioredoxin domain YIM_RS38855 PF11838 ERAP1-like C-terminal domain YIM_RS38855 PF01433 Peptidase family M1 domain YIM_RS38860 PF17174 Domain of unknown function (DUF5130) YIM_RS38880 PF00924 Mechanosensitive ion channel YIM_RS38885 PF01152 Bacterial-like globin YIM_RS38890 PF00128 Alpha amylase, catalytic domain YIM_RS38920 PF05088 Bacterial NAD-glutamate dehydrogenase YIM_RS38930 PF00005 ABC transporter YIM_RS38930 PF12848 ABC transporter YIM_RS38935 PF00436 Single-strand binding protein family YIM_RS38940 PF05425 Copper resistance protein D YIM_RS38940 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YIM_RS38980 PF16861 Carbamoyltransferase C-terminus YIM_RS38980 PF02543 Carbamoyltransferase N-terminus YIM_RS38985 PF03171 2OG-Fe(II) oxygenase superfamily YIM_RS38985 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_RS39000 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_RS39000 PF03171 2OG-Fe(II) oxygenase superfamily YIM_RS39005 PF00550 Phosphopantetheine attachment site YIM_RS39005 PF00501 AMP-binding enzyme YIM_RS39005 PF13193 AMP-binding enzyme C-terminal domain YIM_RS39005 PF00975 Thioesterase domain YIM_RS39005 PF00668 Condensation domain YIM_RS39010 PF00202 Aminotransferase class-III YIM_RS39015 PF00266 Aminotransferase class-V YIM_RS39020 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_RS39020 PF03171 2OG-Fe(II) oxygenase superfamily YIM_RS39025 PF07690 Major Facilitator Superfamily YIM_RS39035 PF01757 Acyltransferase family YIM_RS39040 PF00376 MerR family regulatory protein YIM_RS39040 PF09278 MerR, DNA binding YIM_RS39055 PF03551 Transcriptional regulator PadR-like family YIM_RS39070 PF01717 Cobalamin-independent synthase, Catalytic domain YIM_RS39080 PF03466 LysR substrate binding domain YIM_RS39080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS39085 PF00892 EamA-like transporter family YIM_RS39090 PF07690 Major Facilitator Superfamily YIM_RS39095 PF01047 MarR family YIM_RS39100 PF00194 Eukaryotic-type carbonic anhydrase YIM_RS39140 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_RS39145 PF01209 ubiE/COQ5 methyltransferase family YIM_RS39150 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS39155 PF00501 AMP-binding enzyme YIM_RS39155 PF00668 Condensation domain YIM_RS39155 PF13193 AMP-binding enzyme C-terminal domain YIM_RS39155 PF00668 Condensation domain YIM_RS39155 PF00550 Phosphopantetheine attachment site YIM_RS39155 PF00550 Phosphopantetheine attachment site YIM_RS39155 PF13193 AMP-binding enzyme C-terminal domain YIM_RS39155 PF00501 AMP-binding enzyme YIM_RS39160 PF13193 AMP-binding enzyme C-terminal domain YIM_RS39160 PF00668 Condensation domain YIM_RS39160 PF00550 Phosphopantetheine attachment site YIM_RS39160 PF00501 AMP-binding enzyme YIM_RS39165 PF00698 Acyl transferase domain YIM_RS39165 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39165 PF08659 KR domain YIM_RS39165 PF00550 Phosphopantetheine attachment site YIM_RS39165 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39165 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39165 PF14765 Polyketide synthase dehydratase YIM_RS39170 PF00501 AMP-binding enzyme YIM_RS39185 PF00005 ABC transporter YIM_RS39190 PF01061 ABC-2 type transporter YIM_RS39195 PF00072 Response regulator receiver domain YIM_RS39195 PF00196 Bacterial regulatory proteins, luxR family YIM_RS39210 PF01156 Inosine-uridine preferring nucleoside hydrolase YIM_RS39225 PF00183 Hsp90 protein YIM_RS39235 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_RS39240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_RS39240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_RS39250 PF00561 alpha/beta hydrolase fold YIM_RS39255 PF01761 3-dehydroquinate synthase YIM_RS39265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS39265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS39270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS39275 PF00480 ROK family YIM_RS39280 PF01220 Dehydroquinase class II YIM_RS39285 PF08659 KR domain YIM_RS39285 PF14765 Polyketide synthase dehydratase YIM_RS39285 PF00550 Phosphopantetheine attachment site YIM_RS39285 PF00698 Acyl transferase domain YIM_RS39285 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS39285 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39285 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39285 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39290 PF08659 KR domain YIM_RS39290 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39290 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39290 PF18369 Polyketide synthase dimerisation element domain YIM_RS39290 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39290 PF00975 Thioesterase domain YIM_RS39290 PF00698 Acyl transferase domain YIM_RS39290 PF08990 Erythronolide synthase docking YIM_RS39290 PF00550 Phosphopantetheine attachment site YIM_RS39370 PF00698 Acyl transferase domain YIM_RS39370 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39370 PF14765 Polyketide synthase dehydratase YIM_RS39370 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39370 PF00550 Phosphopantetheine attachment site YIM_RS39370 PF08659 KR domain YIM_RS39370 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39375 PF01474 Class-II DAHP synthetase family YIM_RS39380 PF01494 FAD binding domain YIM_RS39385 PF00196 Bacterial regulatory proteins, luxR family YIM_RS39395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS39400 PF00067 Cytochrome P450 YIM_RS39405 PF00067 Cytochrome P450 YIM_RS39420 PF00550 Phosphopantetheine attachment site YIM_RS39420 PF14765 Polyketide synthase dehydratase YIM_RS39420 PF00698 Acyl transferase domain YIM_RS39420 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39420 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39420 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39420 PF08659 KR domain YIM_RS39425 PF00550 Phosphopantetheine attachment site YIM_RS39425 PF08659 KR domain YIM_RS39425 PF00550 Phosphopantetheine attachment site YIM_RS39425 PF14765 Polyketide synthase dehydratase YIM_RS39425 PF00698 Acyl transferase domain YIM_RS39425 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39425 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS39425 PF14765 Polyketide synthase dehydratase YIM_RS39425 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39425 PF08659 KR domain YIM_RS39425 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39425 PF00698 Acyl transferase domain YIM_RS39425 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39425 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS39425 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39425 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39430 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS39430 PF00698 Acyl transferase domain YIM_RS39430 PF00550 Phosphopantetheine attachment site YIM_RS39430 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS39430 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS39430 PF08659 KR domain YIM_RS39430 PF14765 Polyketide synthase dehydratase YIM_RS39435 PF16363 GDP-mannose 4,6 dehydratase YIM_RS39440 PF00664 ABC transporter transmembrane region YIM_RS39440 PF00005 ABC transporter YIM_RS39445 PF00005 ABC transporter YIM_RS39445 PF00664 ABC transporter transmembrane region YIM_RS39450 PF00067 Cytochrome P450 YIM_RS39455 PF07690 Major Facilitator Superfamily YIM_RS39460 PF01209 ubiE/COQ5 methyltransferase family YIM_RS39465 PF09278 MerR, DNA binding YIM_RS39465 PF00376 MerR family regulatory protein YIM_RS39485 PF04679 ATP dependent DNA ligase C terminal region YIM_RS39485 PF01068 ATP dependent DNA ligase domain YIM_RS39490 PF01047 MarR family YIM_RS39495 PF07690 Major Facilitator Superfamily YIM_RS39500 PF00248 Aldo/keto reductase family YIM_RS39505 PF00106 short chain dehydrogenase YIM_RS39520 PF00196 Bacterial regulatory proteins, luxR family YIM_RS39525 PF01740 STAS domain YIM_RS39530 PF03466 LysR substrate binding domain YIM_RS39530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS39535 PF00248 Aldo/keto reductase family YIM_RS39545 PF13191 AAA ATPase domain YIM_RS39545 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS39555 PF05922 Peptidase inhibitor I9 YIM_RS39555 PF00082 Subtilase family YIM_RS39580 PF13520 Amino acid permease YIM_RS39585 PF00795 Carbon-nitrogen hydrolase YIM_RS39590 PF01593 Flavin containing amine oxidoreductase YIM_RS39610 PF00491 Arginase family YIM_RS39615 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS39615 PF00672 HAMP domain YIM_RS39620 PF02785 Biotin carboxylase C-terminal domain YIM_RS39620 PF00364 Biotin-requiring enzyme YIM_RS39620 PF02436 Conserved carboxylase domain YIM_RS39620 PF00682 HMGL-like YIM_RS39620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS39620 PF00289 Biotin carboxylase, N-terminal domain YIM_RS39625 PF05922 Peptidase inhibitor I9 YIM_RS39625 PF00082 Subtilase family YIM_RS39635 PF08125 Mannitol dehydrogenase C-terminal domain YIM_RS39635 PF01232 Mannitol dehydrogenase Rossmann domain YIM_RS39665 PF00072 Response regulator receiver domain YIM_RS39665 PF00196 Bacterial regulatory proteins, luxR family YIM_RS39675 PF02467 Transcription factor WhiB YIM_RS39680 PF00248 Aldo/keto reductase family YIM_RS39685 PF05336 L-rhamnose mutarotase YIM_RS39690 PF07729 FCD domain YIM_RS39690 PF00392 Bacterial regulatory proteins, gntR family YIM_RS39695 PF02653 Branched-chain amino acid transport system / permease component YIM_RS39700 PF00005 ABC transporter YIM_RS39715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS39715 PF13378 Enolase C-terminal domain-like YIM_RS39720 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_RS39730 PF00106 short chain dehydrogenase YIM_RS39740 PF03435 Saccharopine dehydrogenase NADP binding domain YIM_RS39745 PF00743 Flavin-binding monooxygenase-like YIM_RS39750 PF00440 Bacterial regulatory proteins, tetR family YIM_RS39750 PF08360 QacR-like protein, C-terminal region YIM_RS39755 PF14791 DNA polymerase beta thumb YIM_RS39755 PF14716 Helix-hairpin-helix domain YIM_RS39755 PF02811 PHP domain YIM_RS39770 PF00128 Alpha amylase, catalytic domain YIM_RS39775 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS39780 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS39785 PF13416 Bacterial extracellular solute-binding protein YIM_RS39790 PF00356 Bacterial regulatory proteins, lacI family YIM_RS39800 PF00440 Bacterial regulatory proteins, tetR family YIM_RS39800 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS39810 PF12833 Helix-turn-helix domain YIM_RS39810 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YIM_RS39815 PF00743 Flavin-binding monooxygenase-like YIM_RS39820 PF05199 GMC oxidoreductase YIM_RS39830 PF17227 Family of unknown function (DUF5302) YIM_RS39840 PF03466 LysR substrate binding domain YIM_RS39840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS39850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YIM_RS39850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YIM_RS39860 PF01494 FAD binding domain YIM_RS39865 PF00561 alpha/beta hydrolase fold YIM_RS39870 PF01494 FAD binding domain YIM_RS39900 PF03301 Tryptophan 2,3-dioxygenase YIM_RS39915 PF01494 FAD binding domain YIM_RS39925 PF13193 AMP-binding enzyme C-terminal domain YIM_RS39925 PF00501 AMP-binding enzyme YIM_RS39930 PF00106 short chain dehydrogenase YIM_RS39935 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS39945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS39945 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS39945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS39955 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_RS39960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS39960 PF03466 LysR substrate binding domain YIM_RS39965 PF00939 Sodium:sulfate symporter transmembrane region YIM_RS39970 PF01008 Initiation factor 2 subunit family YIM_RS39970 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_RS39975 PF00266 Aminotransferase class-V YIM_RS39985 PF13183 4Fe-4S dicluster domain YIM_RS39985 PF02913 FAD linked oxidases, C-terminal domain YIM_RS39985 PF01565 FAD binding domain YIM_RS39995 PF04898 Glutamate synthase central domain YIM_RS39995 PF00310 Glutamine amidotransferases class-II YIM_RS39995 PF01493 GXGXG motif YIM_RS39995 PF01645 Conserved region in glutamate synthase YIM_RS40000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YIM_RS40000 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS40020 PF01032 FecCD transport family YIM_RS40025 PF01032 FecCD transport family YIM_RS40030 PF00664 ABC transporter transmembrane region YIM_RS40030 PF00005 ABC transporter YIM_RS40035 PF00664 ABC transporter transmembrane region YIM_RS40035 PF00005 ABC transporter YIM_RS40040 PF01497 Periplasmic binding protein YIM_RS40045 PF03621 MbtH-like protein YIM_RS40050 PF00550 Phosphopantetheine attachment site YIM_RS40050 PF00501 AMP-binding enzyme YIM_RS40050 PF00668 Condensation domain YIM_RS40050 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40050 PF07993 Male sterility protein YIM_RS40055 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YIM_RS40060 PF02911 Formyl transferase, C-terminal domain YIM_RS40060 PF00551 Formyl transferase YIM_RS40065 PF00313 'Cold-shock' DNA-binding domain YIM_RS40070 PF16655 PhoD-like phosphatase, N-terminal domain YIM_RS40070 PF09423 PhoD-like phosphatase YIM_RS40080 PF03704 Bacterial transcriptional activator domain YIM_RS40080 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40080 PF00931 NB-ARC domain YIM_RS40090 PF00561 alpha/beta hydrolase fold YIM_RS40095 PF02973 Sialidase, N-terminal domain YIM_RS40095 PF00754 F5/8 type C domain YIM_RS40095 PF13088 BNR repeat-like domain YIM_RS40105 PF07729 FCD domain YIM_RS40105 PF00392 Bacterial regulatory proteins, gntR family YIM_RS40110 PF00106 short chain dehydrogenase YIM_RS40125 PF01039 Carboxyl transferase domain YIM_RS40130 PF00975 Thioesterase domain YIM_RS40145 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS40145 PF00698 Acyl transferase domain YIM_RS40145 PF00550 Phosphopantetheine attachment site YIM_RS40145 PF08659 KR domain YIM_RS40145 PF14765 Polyketide synthase dehydratase YIM_RS40145 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS40145 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS40150 PF08659 KR domain YIM_RS40150 PF00550 Phosphopantetheine attachment site YIM_RS40150 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS40150 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS40150 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS40150 PF00698 Acyl transferase domain YIM_RS40150 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS40150 PF14765 Polyketide synthase dehydratase YIM_RS40155 PF00698 Acyl transferase domain YIM_RS40155 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS40155 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS40155 PF00550 Phosphopantetheine attachment site YIM_RS40155 PF08659 KR domain YIM_RS40155 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS40155 PF14765 Polyketide synthase dehydratase YIM_RS40165 PF00144 Beta-lactamase YIM_RS40170 PF00266 Aminotransferase class-V YIM_RS40175 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40175 PF00931 NB-ARC domain YIM_RS40175 PF03704 Bacterial transcriptional activator domain YIM_RS40185 PF01011 PQQ enzyme repeat YIM_RS40185 PF13360 PQQ-like domain YIM_RS40205 PF12704 MacB-like periplasmic core domain YIM_RS40205 PF02687 FtsX-like permease family YIM_RS40210 PF00005 ABC transporter YIM_RS40210 PF02687 FtsX-like permease family YIM_RS40210 PF12704 MacB-like periplasmic core domain YIM_RS40230 PF00672 HAMP domain YIM_RS40230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS40230 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS40235 PF00072 Response regulator receiver domain YIM_RS40235 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_RS40240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_RS40255 PF00364 Biotin-requiring enzyme YIM_RS40255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_RS40255 PF02817 e3 binding domain YIM_RS40260 PF00067 Cytochrome P450 YIM_RS40270 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40270 PF03704 Bacterial transcriptional activator domain YIM_RS40270 PF00931 NB-ARC domain YIM_RS40275 PF14490 Helix-hairpin-helix containing domain YIM_RS40275 PF13538 UvrD-like helicase C-terminal domain YIM_RS40275 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain YIM_RS40280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS40285 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS40290 PF01037 Lrp/AsnC ligand binding domain YIM_RS40295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YIM_RS40295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YIM_RS40310 PF00384 Molybdopterin oxidoreductase YIM_RS40310 PF01568 Molydopterin dinucleotide binding domain YIM_RS40315 PF04434 SWIM zinc finger YIM_RS40320 PF05762 VWA domain containing CoxE-like protein YIM_RS40330 PF07728 AAA domain (dynein-related subfamily) YIM_RS40335 PF13569 Domain of unknown function (DUF4132) YIM_RS40345 PF01061 ABC-2 type transporter YIM_RS40350 PF00005 ABC transporter YIM_RS40350 PF13732 Domain of unknown function (DUF4162) YIM_RS40360 PF03793 PASTA domain YIM_RS40360 PF00069 Protein kinase domain YIM_RS40375 PF07726 ATPase family associated with various cellular activities (AAA) YIM_RS40375 PF17863 AAA lid domain YIM_RS40385 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS40385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS40385 PF00672 HAMP domain YIM_RS40390 PF00072 Response regulator receiver domain YIM_RS40390 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40395 PF03704 Bacterial transcriptional activator domain YIM_RS40395 PF00931 NB-ARC domain YIM_RS40395 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40405 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40405 PF00072 Response regulator receiver domain YIM_RS40435 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_RS40440 PF00009 Elongation factor Tu GTP binding domain YIM_RS40455 PF03466 LysR substrate binding domain YIM_RS40455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS40460 PF00089 Trypsin YIM_RS40465 PF03989 DNA gyrase C-terminal domain, beta-propeller YIM_RS40465 PF00521 DNA gyrase/topoisomerase IV, subunit A YIM_RS40470 PF00204 DNA gyrase B YIM_RS40470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS40470 PF01751 Toprim domain YIM_RS40470 PF00986 DNA gyrase B subunit, carboxyl terminus YIM_RS40485 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS40485 PF14759 Reductase C-terminal YIM_RS40495 PF00069 Protein kinase domain YIM_RS40555 PF01022 Bacterial regulatory protein, arsR family YIM_RS40560 PF11799 impB/mucB/samB family C-terminal domain YIM_RS40560 PF00817 impB/mucB/samB family YIM_RS40585 PF01039 Carboxyl transferase domain YIM_RS40595 PF16363 GDP-mannose 4,6 dehydratase YIM_RS40600 PF01613 Flavin reductase like domain YIM_RS40610 PF00550 Phosphopantetheine attachment site YIM_RS40610 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS40610 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS40610 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS40610 PF00698 Acyl transferase domain YIM_RS40610 PF08659 KR domain YIM_RS40615 PF00067 Cytochrome P450 YIM_RS40620 PF05721 Phytanoyl-CoA dioxygenase (PhyH) YIM_RS40625 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40625 PF00668 Condensation domain YIM_RS40625 PF00501 AMP-binding enzyme YIM_RS40625 PF00550 Phosphopantetheine attachment site YIM_RS40630 PF00501 AMP-binding enzyme YIM_RS40630 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40630 PF00668 Condensation domain YIM_RS40630 PF07993 Male sterility protein YIM_RS40630 PF00550 Phosphopantetheine attachment site YIM_RS40645 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal YIM_RS40645 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal YIM_RS40650 PF00221 Aromatic amino acid lyase YIM_RS40655 PF00668 Condensation domain YIM_RS40655 PF00550 Phosphopantetheine attachment site YIM_RS40655 PF00501 AMP-binding enzyme YIM_RS40655 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40665 PF00733 Asparagine synthase YIM_RS40665 PF13537 Glutamine amidotransferase domain YIM_RS40670 PF00501 AMP-binding enzyme YIM_RS40670 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40670 PF00668 Condensation domain YIM_RS40670 PF00975 Thioesterase domain YIM_RS40670 PF00550 Phosphopantetheine attachment site YIM_RS40675 PF00668 Condensation domain YIM_RS40675 PF00550 Phosphopantetheine attachment site YIM_RS40675 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40675 PF00501 AMP-binding enzyme YIM_RS40680 PF01177 Asp/Glu/Hydantoin racemase YIM_RS40695 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS40695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS40695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS40700 PF13193 AMP-binding enzyme C-terminal domain YIM_RS40700 PF00501 AMP-binding enzyme YIM_RS40705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS40705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS40720 PF01757 Acyltransferase family YIM_RS40725 PF08241 Methyltransferase domain YIM_RS40730 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS40735 PF01494 FAD binding domain YIM_RS40740 PF07478 D-ala D-ala ligase C-terminus YIM_RS40740 PF01820 D-ala D-ala ligase N-terminus YIM_RS40755 PF07690 Major Facilitator Superfamily YIM_RS40760 PF01979 Amidohydrolase family YIM_RS40765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS40765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS40765 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS40775 PF07690 Major Facilitator Superfamily YIM_RS40785 PF08031 Berberine and berberine like YIM_RS40785 PF01565 FAD binding domain YIM_RS40790 PF01209 ubiE/COQ5 methyltransferase family YIM_RS40800 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_RS40800 PF08608 Wyosine base formation YIM_RS40820 PF00732 GMC oxidoreductase YIM_RS40820 PF05199 GMC oxidoreductase YIM_RS40830 PF00067 Cytochrome P450 YIM_RS40855 PF02311 AraC-like ligand binding domain YIM_RS40855 PF12833 Helix-turn-helix domain YIM_RS40865 PF00196 Bacterial regulatory proteins, luxR family YIM_RS40865 PF00072 Response regulator receiver domain YIM_RS40870 PF07730 Histidine kinase YIM_RS40870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS40890 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40890 PF03704 Bacterial transcriptional activator domain YIM_RS40895 PF01638 HxlR-like helix-turn-helix YIM_RS40900 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS40905 PF13537 Glutamine amidotransferase domain YIM_RS40905 PF00733 Asparagine synthase YIM_RS40910 PF07683 Cobalamin synthesis protein cobW C-terminal domain YIM_RS40910 PF02492 CobW/HypB/UreG, nucleotide-binding domain YIM_RS40915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YIM_RS40915 PF05221 S-adenosyl-L-homocysteine hydrolase YIM_RS40920 PF01568 Molydopterin dinucleotide binding domain YIM_RS40920 PF00384 Molybdopterin oxidoreductase YIM_RS40930 PF18719 ArlS sensor domain YIM_RS40930 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS40930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS40935 PF00072 Response regulator receiver domain YIM_RS40935 PF00486 Transcriptional regulatory protein, C terminal YIM_RS40940 PF00072 Response regulator receiver domain YIM_RS40940 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS40970 PF03466 LysR substrate binding domain YIM_RS40970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS40985 PF01965 DJ-1/PfpI family YIM_RS40990 PF01022 Bacterial regulatory protein, arsR family YIM_RS41000 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_RS41005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_RS41005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_RS41010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_RS41010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_RS41015 PF02502 Ribose/Galactose Isomerase YIM_RS41020 PF02733 Dak1 domain YIM_RS41020 PF02734 DAK2 domain YIM_RS41025 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS41030 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS41035 PF08220 DeoR-like helix-turn-helix domain YIM_RS41035 PF00455 DeoR C terminal sensor domain YIM_RS41040 PF07690 Major Facilitator Superfamily YIM_RS41045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_RS41065 PF13443 Cro/C1-type HTH DNA-binding domain YIM_RS41070 PF01638 HxlR-like helix-turn-helix YIM_RS41080 PF00296 Luciferase-like monooxygenase YIM_RS41095 PF00072 Response regulator receiver domain YIM_RS41095 PF03861 ANTAR domain YIM_RS41100 PF03631 Virulence factor BrkB YIM_RS41105 PF00135 Carboxylesterase family YIM_RS41110 PF00440 Bacterial regulatory proteins, tetR family YIM_RS41110 PF08359 YsiA-like protein, C-terminal region YIM_RS41120 PF01341 Glycosyl hydrolases family 6 YIM_RS41125 PF00722 Glycosyl hydrolases family 16 YIM_RS41130 PF00083 Sugar (and other) transporter YIM_RS41140 PF07690 Major Facilitator Superfamily YIM_RS41145 PF00535 Glycosyl transferase family 2 YIM_RS41150 PF06969 HemN C-terminal domain YIM_RS41150 PF04055 Radical SAM superfamily YIM_RS41155 PF00356 Bacterial regulatory proteins, lacI family YIM_RS41160 PF00440 Bacterial regulatory proteins, tetR family YIM_RS41175 PF07549 SecD/SecF GG Motif YIM_RS41175 PF02355 Protein export membrane protein YIM_RS41180 PF13847 Methyltransferase domain YIM_RS41185 PF00743 Flavin-binding monooxygenase-like YIM_RS41200 PF00085 Thioredoxin YIM_RS41205 PF02082 Transcriptional regulator YIM_RS41220 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase YIM_RS41225 PF00067 Cytochrome P450 YIM_RS41230 PF00072 Response regulator receiver domain YIM_RS41230 PF00196 Bacterial regulatory proteins, luxR family YIM_RS41235 PF07730 Histidine kinase YIM_RS41240 PF00561 alpha/beta hydrolase fold YIM_RS41245 PF13298 DNA polymerase Ligase (LigD) YIM_RS41245 PF01068 ATP dependent DNA ligase domain YIM_RS41245 PF04679 ATP dependent DNA ligase C terminal region YIM_RS41250 PF00440 Bacterial regulatory proteins, tetR family YIM_RS41260 PF02811 PHP domain YIM_RS41260 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_RS41260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_RS41260 PF14579 Helix-hairpin-helix motif YIM_RS41260 PF01336 OB-fold nucleic acid binding domain YIM_RS41265 PF00561 alpha/beta hydrolase fold YIM_RS41270 PF00440 Bacterial regulatory proteins, tetR family YIM_RS41290 PF01494 FAD binding domain YIM_RS41300 PF04226 Transglycosylase associated protein YIM_RS41330 PF07690 Major Facilitator Superfamily YIM_RS41345 PF00392 Bacterial regulatory proteins, gntR family YIM_RS41345 PF07729 FCD domain YIM_RS41355 PF01339 CheB methylesterase YIM_RS41355 PF00072 Response regulator receiver domain YIM_RS41365 PF03705 CheR methyltransferase, all-alpha domain YIM_RS41365 PF08448 PAS fold YIM_RS41365 PF01739 CheR methyltransferase, SAM binding domain YIM_RS41365 PF01339 CheB methylesterase YIM_RS41400 PF07690 Major Facilitator Superfamily YIM_RS41405 PF01638 HxlR-like helix-turn-helix YIM_RS41420 PF00578 AhpC/TSA family YIM_RS41430 PF01725 Ham1 family YIM_RS41435 PF03725 3' exoribonuclease family, domain 2 YIM_RS41435 PF01138 3' exoribonuclease family, domain 1 YIM_RS41445 PF12706 Beta-lactamase superfamily domain YIM_RS41450 PF01177 Asp/Glu/Hydantoin racemase YIM_RS41455 PF01694 Rhomboid family YIM_RS41460 PF07676 WD40-like Beta Propeller Repeat YIM_RS41465 PF01694 Rhomboid family YIM_RS41470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_RS41470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_RS41485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS41485 PF03466 LysR substrate binding domain YIM_RS41500 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS41505 PF02597 ThiS family YIM_RS41510 PF14464 Prokaryotic homologs of the JAB domain YIM_RS41515 PF03576 Peptidase family S58 YIM_RS41520 PF09438 Domain of unknown function (DUF2017) YIM_RS41525 PF02617 ATP-dependent Clp protease adaptor protein ClpS YIM_RS41530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YIM_RS41530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YIM_RS41535 PF00857 Isochorismatase family YIM_RS41550 PF13307 Helicase C-terminal domain YIM_RS41580 PF00115 Cytochrome C and Quinol oxidase polypeptide I YIM_RS41585 PF04978 Protein of unknown function (DUF664) YIM_RS41595 PF16995 Transmembrane region of lysyl-tRNA synthetase YIM_RS41595 PF09924 Uncharacterised conserved protein (DUF2156) YIM_RS41595 PF00152 tRNA synthetases class II (D, K and N) YIM_RS41595 PF01336 OB-fold nucleic acid binding domain YIM_RS41600 PF02548 Ketopantoate hydroxymethyltransferase YIM_RS41605 PF00561 alpha/beta hydrolase fold YIM_RS41615 PF00202 Aminotransferase class-III YIM_RS41620 PF00171 Aldehyde dehydrogenase family YIM_RS41625 PF01497 Periplasmic binding protein YIM_RS41630 PF08206 Ribonuclease B OB domain YIM_RS41630 PF00773 RNB domain YIM_RS41630 PF00575 S1 RNA binding domain YIM_RS41640 PF00704 Glycosyl hydrolases family 18 YIM_RS41640 PF00041 Fibronectin type III domain YIM_RS41640 PF02018 Carbohydrate binding domain YIM_RS41650 PF00877 NlpC/P60 family YIM_RS41700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_RS41700 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_RS41700 PF04324 BFD-like [2Fe-2S] binding domain YIM_RS41700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_RS41700 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS41715 PF04542 Sigma-70 region 2 YIM_RS41715 PF04545 Sigma-70, region 4 YIM_RS41725 PF00072 Response regulator receiver domain YIM_RS41725 PF00196 Bacterial regulatory proteins, luxR family YIM_RS41735 PF03186 CobD/Cbib protein YIM_RS41740 PF02104 SURF1 family YIM_RS41750 PF01451 Low molecular weight phosphotyrosine protein phosphatase YIM_RS41755 PF00356 Bacterial regulatory proteins, lacI family YIM_RS41765 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS41770 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS41775 PF00232 Glycosyl hydrolase family 1 YIM_RS41780 PF10503 Esterase PHB depolymerase YIM_RS41790 PF00561 alpha/beta hydrolase fold YIM_RS41795 PF00196 Bacterial regulatory proteins, luxR family YIM_RS41795 PF00072 Response regulator receiver domain YIM_RS41800 PF00561 alpha/beta hydrolase fold YIM_RS41810 PF04542 Sigma-70 region 2 YIM_RS41810 PF12680 SnoaL-like domain YIM_RS41810 PF08281 Sigma-70, region 4 YIM_RS41820 PF01784 NIF3 (NGG1p interacting factor 3) YIM_RS41825 PF02591 C4-type zinc ribbon domain YIM_RS41830 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS41830 PF13456 Reverse transcriptase-like YIM_RS41840 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain YIM_RS41840 PF00293 NUDIX domain YIM_RS41840 PF09297 NADH pyrophosphatase zinc ribbon domain YIM_RS41845 PF00675 Insulinase (Peptidase family M16) YIM_RS41845 PF05193 Peptidase M16 inactive domain YIM_RS41880 PF07726 ATPase family associated with various cellular activities (AAA) YIM_RS41880 PF17863 AAA lid domain YIM_RS41885 PF14258 Domain of unknown function (DUF4350) YIM_RS41900 PF04228 Putative neutral zinc metallopeptidase YIM_RS41910 PF00440 Bacterial regulatory proteins, tetR family YIM_RS41920 PF00999 Sodium/hydrogen exchanger family YIM_RS41920 PF02254 TrkA-N domain YIM_RS41925 PF00580 UvrD/REP helicase N-terminal domain YIM_RS41925 PF13361 UvrD-like helicase C-terminal domain YIM_RS41930 PF13361 UvrD-like helicase C-terminal domain YIM_RS41930 PF00580 UvrD/REP helicase N-terminal domain YIM_RS41940 PF08021 Siderophore-interacting FAD-binding domain YIM_RS41940 PF04954 Siderophore-interacting protein YIM_RS41950 PF08279 HTH domain YIM_RS41950 PF13280 WYL domain YIM_RS41965 PF01425 Amidase YIM_RS41985 PF00113 Enolase, C-terminal TIM barrel domain YIM_RS41985 PF03952 Enolase, N-terminal domain YIM_RS41990 PF13806 Rieske-like [2Fe-2S] domain YIM_RS41990 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_RS41990 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS41990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_RS41990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_RS41990 PF04324 BFD-like [2Fe-2S] binding domain YIM_RS41995 PF04324 BFD-like [2Fe-2S] binding domain YIM_RS41995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_RS41995 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_RS41995 PF13806 Rieske-like [2Fe-2S] domain YIM_RS41995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_RS41995 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS42000 PF07690 Major Facilitator Superfamily YIM_RS42005 PF04324 BFD-like [2Fe-2S] binding domain YIM_RS42005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_RS42005 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS42005 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_RS42010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_RS42010 PF00384 Molybdopterin oxidoreductase YIM_RS42010 PF01568 Molydopterin dinucleotide binding domain YIM_RS42020 PF00899 ThiF family YIM_RS42020 PF00581 Rhodanese-like domain YIM_RS42030 PF12697 Alpha/beta hydrolase family YIM_RS42040 PF00561 alpha/beta hydrolase fold YIM_RS42050 PF00440 Bacterial regulatory proteins, tetR family YIM_RS42075 PF00271 Helicase conserved C-terminal domain YIM_RS42075 PF00270 DEAD/DEAH box helicase YIM_RS42100 PF01914 MarC family integral membrane protein YIM_RS42105 PF02811 PHP domain YIM_RS42120 PF13344 Haloacid dehalogenase-like hydrolase YIM_RS42120 PF00293 NUDIX domain YIM_RS42135 PF01544 CorA-like Mg2+ transporter protein YIM_RS42155 PF17912 MalK OB fold domain YIM_RS42155 PF00005 ABC transporter YIM_RS42160 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS42165 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS42170 PF01547 Bacterial extracellular solute-binding protein YIM_RS42180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS42180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS42180 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS42190 PF01145 SPFH domain / Band 7 family YIM_RS42195 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase YIM_RS42200 PF00571 CBS domain YIM_RS42200 PF03448 MgtE intracellular N domain YIM_RS42200 PF01769 Divalent cation transporter YIM_RS42210 PF01883 Iron-sulfur cluster assembly protein YIM_RS42210 PF10609 NUBPL iron-transfer P-loop NTPase YIM_RS42215 PF02416 mttA/Hcf106 family YIM_RS42220 PF13180 PDZ domain YIM_RS42230 PF08281 Sigma-70, region 4 YIM_RS42230 PF04542 Sigma-70 region 2 YIM_RS42235 PF01596 O-methyltransferase YIM_RS42240 PF07690 Major Facilitator Superfamily YIM_RS42245 PF03466 LysR substrate binding domain YIM_RS42245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS42250 PF02789 Cytosol aminopeptidase family, N-terminal domain YIM_RS42250 PF00883 Cytosol aminopeptidase family, catalytic domain YIM_RS42260 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS42265 PF03352 Methyladenine glycosylase YIM_RS42265 PF13302 Acetyltransferase (GNAT) domain YIM_RS42265 PF00117 Glutamine amidotransferase class-I YIM_RS42265 PF13673 Acetyltransferase (GNAT) domain YIM_RS42265 PF00958 GMP synthase C terminal domain YIM_RS42290 PF01654 Cytochrome bd terminal oxidase subunit I YIM_RS42300 PF00664 ABC transporter transmembrane region YIM_RS42300 PF00005 ABC transporter YIM_RS42310 PF00535 Glycosyl transferase family 2 YIM_RS42320 PF03641 Possible lysine decarboxylase YIM_RS42325 PF03641 Possible lysine decarboxylase YIM_RS42330 PF00759 Glycosyl hydrolase family 9 YIM_RS42330 PF02927 Cellulase N-terminal ig-like domain YIM_RS42335 PF07687 Peptidase dimerisation domain YIM_RS42335 PF01546 Peptidase family M20/M25/M40 YIM_RS42345 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle YIM_RS42345 PF14602 Hexapeptide repeat of succinyl-transferase YIM_RS42355 PF01494 FAD binding domain YIM_RS42365 PF00155 Aminotransferase class I and II YIM_RS42370 PF00037 4Fe-4S binding domain YIM_RS42380 PF01933 Uncharacterised protein family UPF0052 YIM_RS42385 PF01996 F420-0:Gamma-glutamyl ligase YIM_RS42385 PF00881 Nitroreductase family YIM_RS42400 PF00392 Bacterial regulatory proteins, gntR family YIM_RS42415 PF00483 Nucleotidyl transferase YIM_RS42435 PF13439 Glycosyltransferase Family 4 YIM_RS42450 PF00534 Glycosyl transferases group 1 YIM_RS42450 PF13439 Glycosyltransferase Family 4 YIM_RS42455 PF04321 RmlD substrate binding domain YIM_RS42460 PF16363 GDP-mannose 4,6 dehydratase YIM_RS42465 PF13399 LytR cell envelope-related transcriptional attenuator YIM_RS42465 PF03816 Cell envelope-related transcriptional attenuator domain YIM_RS42470 PF03816 Cell envelope-related transcriptional attenuator domain YIM_RS42470 PF13399 LytR cell envelope-related transcriptional attenuator YIM_RS42480 PF07681 DoxX YIM_RS42500 PF06259 Alpha/beta hydrolase YIM_RS42510 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YIM_RS42510 PF02142 MGS-like domain YIM_RS42510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS42520 PF00756 Putative esterase YIM_RS42520 PF08310 LGFP repeat YIM_RS42525 PF01039 Carboxyl transferase domain YIM_RS42530 PF14765 Polyketide synthase dehydratase YIM_RS42530 PF00550 Phosphopantetheine attachment site YIM_RS42530 PF08659 KR domain YIM_RS42530 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS42530 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS42530 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS42530 PF00698 Acyl transferase domain YIM_RS42535 PF00501 AMP-binding enzyme YIM_RS42540 PF07690 Major Facilitator Superfamily YIM_RS42545 PF00268 Ribonucleotide reductase, small chain YIM_RS42560 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS42560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS42560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS42565 PF13193 AMP-binding enzyme C-terminal domain YIM_RS42565 PF00501 AMP-binding enzyme YIM_RS42575 PF00731 AIR carboxylase YIM_RS42580 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YIM_RS42580 PF02222 ATP-grasp domain YIM_RS42585 PF09594 Glycosyltransferase family 87 YIM_RS42590 PF09594 Glycosyltransferase family 87 YIM_RS42615 PF00672 HAMP domain YIM_RS42615 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS42615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS42620 PF00072 Response regulator receiver domain YIM_RS42620 PF00486 Transcriptional regulatory protein, C terminal YIM_RS42625 PF00459 Inositol monophosphatase family YIM_RS42655 PF00682 HMGL-like YIM_RS42665 PF02237 Biotin protein ligase C terminal domain YIM_RS42665 PF03099 Biotin/lipoate A/B protein ligase family YIM_RS42670 PF01476 LysM domain YIM_RS42670 PF00877 NlpC/P60 family YIM_RS42670 PF08239 Bacterial SH3 domain YIM_RS42690 PF01494 FAD binding domain YIM_RS42695 PF00392 Bacterial regulatory proteins, gntR family YIM_RS42705 PF00440 Bacterial regulatory proteins, tetR family YIM_RS42705 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS42715 PF06441 Epoxide hydrolase N terminus YIM_RS42735 PF01039 Carboxyl transferase domain YIM_RS42750 PF07690 Major Facilitator Superfamily YIM_RS42755 PF14310 Fibronectin type III-like domain YIM_RS42755 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_RS42755 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_RS42760 PF02545 Maf-like protein YIM_RS42765 PF00375 Sodium:dicarboxylate symporter family YIM_RS42785 PF00005 ABC transporter YIM_RS42790 PF02653 Branched-chain amino acid transport system / permease component YIM_RS42795 PF02653 Branched-chain amino acid transport system / permease component YIM_RS42800 PF01048 Phosphorylase superfamily YIM_RS42805 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS42805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS42805 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS42810 PF01008 Initiation factor 2 subunit family YIM_RS42820 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_RS42825 PF03079 ARD/ARD' family YIM_RS42830 PF00364 Biotin-requiring enzyme YIM_RS42830 PF02785 Biotin carboxylase C-terminal domain YIM_RS42830 PF00289 Biotin carboxylase, N-terminal domain YIM_RS42830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_RS42840 PF07730 Histidine kinase YIM_RS42840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS42840 PF05231 MASE1 YIM_RS42845 PF00072 Response regulator receiver domain YIM_RS42845 PF00196 Bacterial regulatory proteins, luxR family YIM_RS42855 PF13193 AMP-binding enzyme C-terminal domain YIM_RS42855 PF00501 AMP-binding enzyme YIM_RS42860 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YIM_RS42860 PF01266 FAD dependent oxidoreductase YIM_RS42865 PF00230 Major intrinsic protein YIM_RS42870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_RS42870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_RS42880 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS42880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_RS42890 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_RS42890 PF01546 Peptidase family M20/M25/M40 YIM_RS42905 PF01642 Methylmalonyl-CoA mutase YIM_RS42905 PF02310 B12 binding domain YIM_RS42910 PF01642 Methylmalonyl-CoA mutase YIM_RS42915 PF00069 Protein kinase domain YIM_RS42920 PF01048 Phosphorylase superfamily YIM_RS42925 PF06722 Protein of unknown function (DUF1205) YIM_RS42930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YIM_RS42930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YIM_RS42930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YIM_RS42930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YIM_RS42935 PF02096 60Kd inner membrane protein YIM_RS42965 PF13538 UvrD-like helicase C-terminal domain YIM_RS42975 PF07161 LppX_LprAFG lipoprotein YIM_RS42980 PF07690 Major Facilitator Superfamily YIM_RS42985 PF03129 Anticodon binding domain YIM_RS42985 PF13393 Histidyl-tRNA synthetase YIM_RS42990 PF00248 Aldo/keto reductase family YIM_RS42995 PF00248 Aldo/keto reductase family YIM_RS43000 PF09278 MerR, DNA binding YIM_RS43000 PF00376 MerR family regulatory protein YIM_RS43020 PF01791 DeoC/LacD family aldolase YIM_RS43025 PF00171 Aldehyde dehydrogenase family YIM_RS43030 PF00171 Aldehyde dehydrogenase family YIM_RS43040 PF00067 Cytochrome P450 YIM_RS43045 PF00975 Thioesterase domain YIM_RS43050 PF00583 Acetyltransferase (GNAT) family YIM_RS43055 PF07497 Rho termination factor, RNA-binding domain YIM_RS43055 PF07498 Rho termination factor, N-terminal domain YIM_RS43055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_RS43065 PF00271 Helicase conserved C-terminal domain YIM_RS43065 PF08148 DSHCT (NUC185) domain YIM_RS43065 PF00270 DEAD/DEAH box helicase YIM_RS43075 PF07690 Major Facilitator Superfamily YIM_RS43080 PF00962 Adenosine/AMP deaminase YIM_RS43090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YIM_RS43090 PF00591 Glycosyl transferase family, a/b domain YIM_RS43090 PF02885 Glycosyl transferase family, helical bundle domain YIM_RS43095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_RS43100 PF02653 Branched-chain amino acid transport system / permease component YIM_RS43105 PF02653 Branched-chain amino acid transport system / permease component YIM_RS43110 PF00005 ABC transporter YIM_RS43115 PF02608 ABC transporter substrate-binding protein PnrA-like YIM_RS43120 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation YIM_RS43120 PF14508 Glycosyl-hydrolase 97 N-terminal YIM_RS43120 PF10566 Glycoside hydrolase 97 YIM_RS43125 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_RS43125 PF16499 Alpha galactosidase A YIM_RS43140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YIM_RS43150 PF02910 Fumarate reductase flavoprotein C-term YIM_RS43150 PF00890 FAD binding domain YIM_RS43155 PF13085 2Fe-2S iron-sulfur cluster binding domain YIM_RS43165 PF00356 Bacterial regulatory proteins, lacI family YIM_RS43170 PF01593 Flavin containing amine oxidoreductase YIM_RS43175 PF05378 Hydantoinase/oxoprolinase N-terminal region YIM_RS43175 PF01968 Hydantoinase/oxoprolinase YIM_RS43195 PF05922 Peptidase inhibitor I9 YIM_RS43195 PF00082 Subtilase family YIM_RS43205 PF00768 D-alanyl-D-alanine carboxypeptidase YIM_RS43210 PF07690 Major Facilitator Superfamily YIM_RS43215 PF03631 Virulence factor BrkB YIM_RS43220 PF01494 FAD binding domain YIM_RS43225 PF00440 Bacterial regulatory proteins, tetR family YIM_RS43225 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS43235 PF00579 tRNA synthetases class I (W and Y) YIM_RS43245 PF04055 Radical SAM superfamily YIM_RS43275 PF03372 Endonuclease/Exonuclease/phosphatase family YIM_RS43290 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_RS43325 PF07690 Major Facilitator Superfamily YIM_RS43330 PF01022 Bacterial regulatory protein, arsR family YIM_RS43335 PF07690 Major Facilitator Superfamily YIM_RS43355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YIM_RS43355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YIM_RS43365 PF00561 alpha/beta hydrolase fold YIM_RS43380 PF01979 Amidohydrolase family YIM_RS43395 PF01336 OB-fold nucleic acid binding domain YIM_RS43395 PF02811 PHP domain YIM_RS43395 PF14579 Helix-hairpin-helix motif YIM_RS43395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_RS43395 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_RS43420 PF01161 Phosphatidylethanolamine-binding protein YIM_RS43430 PF01808 AICARFT/IMPCHase bienzyme YIM_RS43430 PF02142 MGS-like domain YIM_RS43435 PF00551 Formyl transferase YIM_RS43450 PF00549 CoA-ligase YIM_RS43450 PF02629 CoA binding domain YIM_RS43455 PF00549 CoA-ligase YIM_RS43455 PF08442 ATP-grasp domain YIM_RS43470 PF00580 UvrD/REP helicase N-terminal domain YIM_RS43470 PF13361 UvrD-like helicase C-terminal domain YIM_RS43480 PF01817 Chorismate mutase type II YIM_RS43500 PF00069 Protein kinase domain YIM_RS43505 PF00069 Protein kinase domain YIM_RS43505 PF03793 PASTA domain YIM_RS43510 PF03466 LysR substrate binding domain YIM_RS43510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_RS43520 PF00072 Response regulator receiver domain YIM_RS43520 PF00196 Bacterial regulatory proteins, luxR family YIM_RS43540 PF00117 Glutamine amidotransferase class-I YIM_RS43540 PF00958 GMP synthase C terminal domain YIM_RS43540 PF02540 NAD synthase YIM_RS43545 PF00107 Zinc-binding dehydrogenase YIM_RS43545 PF13823 Alcohol dehydrogenase GroES-associated YIM_RS43545 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS43550 PF00171 Aldehyde dehydrogenase family YIM_RS43565 PF05199 GMC oxidoreductase YIM_RS43570 PF00478 IMP dehydrogenase / GMP reductase domain YIM_RS43585 PF00571 CBS domain YIM_RS43585 PF00478 IMP dehydrogenase / GMP reductase domain YIM_RS43590 PF17252 Family of unknown function (DUF5319) YIM_RS43600 PF08281 Sigma-70, region 4 YIM_RS43600 PF04542 Sigma-70 region 2 YIM_RS43605 PF00072 Response regulator receiver domain YIM_RS43605 PF00196 Bacterial regulatory proteins, luxR family YIM_RS43620 PF02467 Transcription factor WhiB YIM_RS43625 PF00440 Bacterial regulatory proteins, tetR family YIM_RS43635 PF00118 TCP-1/cpn60 chaperonin family YIM_RS43640 PF00166 Chaperonin 10 Kd subunit YIM_RS43645 PF09423 PhoD-like phosphatase YIM_RS43645 PF16655 PhoD-like phosphatase, N-terminal domain YIM_RS43655 PF00814 Glycoprotease family YIM_RS43660 PF00583 Acetyltransferase (GNAT) family YIM_RS43665 PF00814 Glycoprotease family YIM_RS43680 PF07729 FCD domain YIM_RS43680 PF00392 Bacterial regulatory proteins, gntR family YIM_RS43690 PF13193 AMP-binding enzyme C-terminal domain YIM_RS43690 PF00501 AMP-binding enzyme YIM_RS43695 PF01039 Carboxyl transferase domain YIM_RS43695 PF17848 Acetyl-coA carboxylase zinc finger domain YIM_RS43700 PF01425 Amidase YIM_RS43705 PF05448 Acetyl xylan esterase (AXE1) YIM_RS43710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YIM_RS43715 PF00561 alpha/beta hydrolase fold YIM_RS43715 PF00364 Biotin-requiring enzyme YIM_RS43720 PF01168 Alanine racemase, N-terminal domain YIM_RS43720 PF00842 Alanine racemase, C-terminal domain YIM_RS43725 PF17912 MalK OB fold domain YIM_RS43725 PF00005 ABC transporter YIM_RS43730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_RS43730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_RS43735 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS43735 PF16912 Glucose dehydrogenase C-terminus YIM_RS43740 PF00455 DeoR C terminal sensor domain YIM_RS43740 PF08220 DeoR-like helix-turn-helix domain YIM_RS43745 PF00107 Zinc-binding dehydrogenase YIM_RS43745 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS43750 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS43755 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS43765 PF03853 YjeF-related protein N-terminus YIM_RS43765 PF01256 Carbohydrate kinase YIM_RS43770 PF01380 SIS domain YIM_RS43800 PF00501 AMP-binding enzyme YIM_RS43820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YIM_RS43820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YIM_RS43820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YIM_RS43820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YIM_RS43825 PF00380 Ribosomal protein S9/S16 YIM_RS43830 PF00572 Ribosomal protein L13 YIM_RS43870 PF00012 Hsp70 protein YIM_RS43875 PF01580 FtsK/SpoIIIE family YIM_RS43885 PF00082 Subtilase family YIM_RS43900 PF05108 Type VII secretion system ESX-1, transport TM domain B YIM_RS43925 PF01416 tRNA pseudouridine synthase YIM_RS43930 PF01196 Ribosomal protein L17 YIM_RS43935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YIM_RS43935 PF01000 RNA polymerase Rpb3/RpoA insert domain YIM_RS43935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YIM_RS43940 PF01479 S4 domain YIM_RS43940 PF00163 Ribosomal protein S4/S9 N-terminal domain YIM_RS43945 PF00411 Ribosomal protein S11 YIM_RS43955 PF00416 Ribosomal protein S13/S18 YIM_RS43960 PF00444 Ribosomal protein L36 YIM_RS43965 PF01176 Translation initiation factor 1A / IF-1 YIM_RS43970 PF00557 Metallopeptidase family M24 YIM_RS43980 PF00344 SecY translocase YIM_RS43985 PF01810 LysE type translocator YIM_RS43995 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YIM_RS44000 PF00327 Ribosomal protein L30p/L7e YIM_RS44005 PF00333 Ribosomal protein S5, N-terminal domain YIM_RS44005 PF03719 Ribosomal protein S5, C-terminal domain YIM_RS44010 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YIM_RS44015 PF00347 Ribosomal protein L6 YIM_RS44020 PF00410 Ribosomal protein S8 YIM_RS44025 PF00253 Ribosomal protein S14p/S29e YIM_RS44030 PF00281 Ribosomal protein L5 YIM_RS44030 PF00673 ribosomal L5P family C-terminus YIM_RS44035 PF00467 KOW motif YIM_RS44035 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YIM_RS44040 PF00238 Ribosomal protein L14p/L23e YIM_RS44045 PF00366 Ribosomal protein S17 YIM_RS44050 PF00831 Ribosomal L29 protein YIM_RS44055 PF00252 Ribosomal protein L16p/L10e YIM_RS44060 PF07650 KH domain YIM_RS44060 PF00189 Ribosomal protein S3, C-terminal domain YIM_RS44065 PF00237 Ribosomal protein L22p/L17e YIM_RS44070 PF00203 Ribosomal protein S19 YIM_RS44075 PF00181 Ribosomal Proteins L2, RNA binding domain YIM_RS44075 PF03947 Ribosomal Proteins L2, C-terminal domain YIM_RS44080 PF00276 Ribosomal protein L23 YIM_RS44085 PF00573 Ribosomal protein L4/L1 family YIM_RS44090 PF00297 Ribosomal protein L3 YIM_RS44095 PF00338 Ribosomal protein S10p/S20e YIM_RS44100 PF00009 Elongation factor Tu GTP binding domain YIM_RS44100 PF03143 Elongation factor Tu C-terminal domain YIM_RS44100 PF03144 Elongation factor Tu domain 2 YIM_RS44105 PF00679 Elongation factor G C-terminus YIM_RS44105 PF14492 Elongation Factor G, domain II YIM_RS44105 PF03764 Elongation factor G, domain IV YIM_RS44105 PF03144 Elongation factor Tu domain 2 YIM_RS44105 PF00009 Elongation factor Tu GTP binding domain YIM_RS44110 PF00177 Ribosomal protein S7p/S5e YIM_RS44115 PF00164 Ribosomal protein S12/S23 YIM_RS44145 PF01026 TatD related DNase YIM_RS44155 PF01040 UbiA prenyltransferase family YIM_RS44165 PF04616 Glycosyl hydrolases family 43 YIM_RS44165 PF03422 Carbohydrate binding module (family 6) YIM_RS44170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS44170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS44180 PF02653 Branched-chain amino acid transport system / permease component YIM_RS44185 PF00005 ABC transporter YIM_RS44190 PF00480 ROK family YIM_RS44190 PF01047 MarR family YIM_RS44195 PF00480 ROK family YIM_RS44195 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_RS44250 PF01427 D-ala-D-ala dipeptidase YIM_RS44255 PF00072 Response regulator receiver domain YIM_RS44255 PF00196 Bacterial regulatory proteins, luxR family YIM_RS44260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS44260 PF07730 Histidine kinase YIM_RS44265 PF13732 Domain of unknown function (DUF4162) YIM_RS44265 PF00005 ABC transporter YIM_RS44285 PF04997 RNA polymerase Rpb1, domain 1 YIM_RS44285 PF04998 RNA polymerase Rpb1, domain 5 YIM_RS44285 PF00623 RNA polymerase Rpb1, domain 2 YIM_RS44285 PF05000 RNA polymerase Rpb1, domain 4 YIM_RS44285 PF04983 RNA polymerase Rpb1, domain 3 YIM_RS44290 PF10385 RNA polymerase beta subunit external 1 domain YIM_RS44290 PF04565 RNA polymerase Rpb2, domain 3 YIM_RS44290 PF00562 RNA polymerase Rpb2, domain 6 YIM_RS44290 PF04560 RNA polymerase Rpb2, domain 7 YIM_RS44290 PF04563 RNA polymerase beta subunit YIM_RS44290 PF04561 RNA polymerase Rpb2, domain 2 YIM_RS44335 PF02405 Permease MlaE YIM_RS44345 PF00005 ABC transporter YIM_RS44350 PF00542 Ribosomal protein L7/L12 C-terminal domain YIM_RS44350 PF16320 Ribosomal protein L7/L12 dimerisation domain YIM_RS44355 PF00466 Ribosomal protein L10 YIM_RS44370 PF00687 Ribosomal protein L1p/L10e family YIM_RS44375 PF00298 Ribosomal protein L11, RNA binding domain YIM_RS44375 PF03946 Ribosomal protein L11, N-terminal domain YIM_RS44380 PF02357 Transcription termination factor nusG YIM_RS44385 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YIM_RS44395 PF00155 Aminotransferase class I and II YIM_RS44400 PF00296 Luciferase-like monooxygenase YIM_RS44405 PF00392 Bacterial regulatory proteins, gntR family YIM_RS44405 PF00155 Aminotransferase class I and II YIM_RS44425 PF13452 N-terminal half of MaoC dehydratase YIM_RS44430 PF00089 Trypsin YIM_RS44430 PF02983 Alpha-lytic protease prodomain YIM_RS44435 PF00471 Ribosomal protein L33 YIM_RS44450 PF03707 Bacterial signalling protein N terminal repeat YIM_RS44450 PF00563 EAL domain YIM_RS44450 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS44465 PF02190 ATP-dependent protease La (LON) substrate-binding domain YIM_RS44465 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS44465 PF05362 Lon protease (S16) C-terminal proteolytic domain YIM_RS44470 PF09335 SNARE associated Golgi protein YIM_RS44475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS44475 PF07730 Histidine kinase YIM_RS44480 PF00196 Bacterial regulatory proteins, luxR family YIM_RS44480 PF00072 Response regulator receiver domain YIM_RS44485 PF03109 ABC1 family YIM_RS44490 PF16295 Tetracyclin repressor-like, C-terminal domain YIM_RS44490 PF00440 Bacterial regulatory proteins, tetR family YIM_RS44495 PF00440 Bacterial regulatory proteins, tetR family YIM_RS44495 PF08359 YsiA-like protein, C-terminal region YIM_RS44510 PF00144 Beta-lactamase YIM_RS44520 PF00144 Beta-lactamase YIM_RS44540 PF13344 Haloacid dehalogenase-like hydrolase YIM_RS44540 PF00293 NUDIX domain YIM_RS44555 PF00392 Bacterial regulatory proteins, gntR family YIM_RS44555 PF07729 FCD domain YIM_RS44565 PF03668 P-loop ATPase protein family YIM_RS44605 PF00145 C-5 cytosine-specific DNA methylase YIM_RS44635 PF04461 Protein of unknown function (DUF520) YIM_RS44645 PF00440 Bacterial regulatory proteins, tetR family YIM_RS44650 PF00561 alpha/beta hydrolase fold YIM_RS44655 PF00483 Nucleotidyl transferase YIM_RS44660 PF01435 Peptidase family M48 YIM_RS44670 PF00296 Luciferase-like monooxygenase YIM_RS44680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS44680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS44685 PF16363 GDP-mannose 4,6 dehydratase YIM_RS44690 PF00355 Rieske [2Fe-2S] domain YIM_RS44705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS44720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_RS44725 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_RS44795 PF00535 Glycosyl transferase family 2 YIM_RS44805 PF13404 AsnC-type helix-turn-helix domain YIM_RS44805 PF01037 Lrp/AsnC ligand binding domain YIM_RS44810 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS44815 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YIM_RS44815 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YIM_RS44815 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YIM_RS44820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS44830 PF00348 Polyprenyl synthetase YIM_RS44885 PF00361 Proton-conducting membrane transporter YIM_RS44890 PF00361 Proton-conducting membrane transporter YIM_RS44895 PF00361 Proton-conducting membrane transporter YIM_RS44895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YIM_RS44900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YIM_RS44905 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YIM_RS44910 PF12838 4Fe-4S dicluster domain YIM_RS44915 PF00146 NADH dehydrogenase YIM_RS44920 PF00384 Molybdopterin oxidoreductase YIM_RS44920 PF01568 Molydopterin dinucleotide binding domain YIM_RS44920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YIM_RS44925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YIM_RS44925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YIM_RS44925 PF10531 SLBB domain YIM_RS44935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YIM_RS44940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YIM_RS44945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YIM_RS44950 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YIM_RS44955 PF01494 FAD binding domain YIM_RS44960 PF01209 ubiE/COQ5 methyltransferase family YIM_RS44965 PF00534 Glycosyl transferases group 1 YIM_RS44965 PF13579 Glycosyl transferase 4-like domain YIM_RS44970 PF00534 Glycosyl transferases group 1 YIM_RS44970 PF13439 Glycosyltransferase Family 4 YIM_RS44975 PF00459 Inositol monophosphatase family YIM_RS44985 PF11838 ERAP1-like C-terminal domain YIM_RS44985 PF01433 Peptidase family M1 domain YIM_RS44990 PF03746 LamB/YcsF family YIM_RS44995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS44995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS45000 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS45005 PF00501 AMP-binding enzyme YIM_RS45005 PF13193 AMP-binding enzyme C-terminal domain YIM_RS45015 PF01040 UbiA prenyltransferase family YIM_RS45020 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS45030 PF01037 Lrp/AsnC ligand binding domain YIM_RS45050 PF01578 Cytochrome C assembly protein YIM_RS45065 PF08534 Redoxin YIM_RS45070 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS45075 PF00202 Aminotransferase class-III YIM_RS45085 PF12704 MacB-like periplasmic core domain YIM_RS45085 PF02687 FtsX-like permease family YIM_RS45085 PF00005 ABC transporter YIM_RS45090 PF02687 FtsX-like permease family YIM_RS45090 PF12704 MacB-like periplasmic core domain YIM_RS45090 PF00005 ABC transporter YIM_RS45095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YIM_RS45115 PF00490 Delta-aminolevulinic acid dehydratase YIM_RS45120 PF10414 Sirohaem synthase dimerisation region YIM_RS45120 PF14824 Sirohaem biosynthesis protein central YIM_RS45120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_RS45125 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YIM_RS45125 PF03900 Porphobilinogen deaminase, C-terminal domain YIM_RS45130 PF01488 Shikimate / quinate 5-dehydrogenase YIM_RS45130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YIM_RS45130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YIM_RS45135 PF06971 Putative DNA-binding protein N-terminus YIM_RS45135 PF02629 CoA binding domain YIM_RS45140 PF03704 Bacterial transcriptional activator domain YIM_RS45140 PF00931 NB-ARC domain YIM_RS45140 PF00486 Transcriptional regulatory protein, C terminal YIM_RS45170 PF05768 Glutaredoxin-like domain (DUF836) YIM_RS45175 PF13193 AMP-binding enzyme C-terminal domain YIM_RS45175 PF00501 AMP-binding enzyme YIM_RS45180 PF04542 Sigma-70 region 2 YIM_RS45180 PF08281 Sigma-70, region 4 YIM_RS45195 PF01553 Acyltransferase YIM_RS45200 PF01370 NAD dependent epimerase/dehydratase family YIM_RS45210 PF12728 Helix-turn-helix domain YIM_RS45215 PF03807 NADP oxidoreductase coenzyme F420-dependent YIM_RS45215 PF14748 Pyrroline-5-carboxylate reductase dimerisation YIM_RS45225 PF01619 Proline dehydrogenase YIM_RS45230 PF01261 Xylose isomerase-like TIM barrel YIM_RS45240 PF02541 Ppx/GppA phosphatase family YIM_RS45245 PF00072 Response regulator receiver domain YIM_RS45245 PF00486 Transcriptional regulatory protein, C terminal YIM_RS45250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS45250 PF00512 His Kinase A (phospho-acceptor) domain YIM_RS45255 PF00248 Aldo/keto reductase family YIM_RS45275 PF00300 Histidine phosphatase superfamily (branch 1) YIM_RS45285 PF10722 Putative bacterial sensory transduction regulator YIM_RS45290 PF13439 Glycosyltransferase Family 4 YIM_RS45290 PF00534 Glycosyl transferases group 1 YIM_RS45295 PF00561 alpha/beta hydrolase fold YIM_RS45300 PF03734 L,D-transpeptidase catalytic domain YIM_RS45300 PF17964 Bacterial Ig domain YIM_RS45305 PF01565 FAD binding domain YIM_RS45305 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YIM_RS45325 PF01842 ACT domain YIM_RS45325 PF00551 Formyl transferase YIM_RS45335 PF00107 Zinc-binding dehydrogenase YIM_RS45335 PF16884 N-terminal domain of oxidoreductase YIM_RS45350 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS45355 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS45360 PF00221 Aromatic amino acid lyase YIM_RS45365 PF02423 Ornithine cyclodeaminase/mu-crystallin family YIM_RS45375 PF10724 Protein of unknown function (DUF2516) YIM_RS45395 PF02224 Cytidylate kinase YIM_RS45395 PF02569 Pantoate-beta-alanine ligase YIM_RS45415 PF04542 Sigma-70 region 2 YIM_RS45415 PF08281 Sigma-70, region 4 YIM_RS45420 PF03795 YCII-related domain YIM_RS45430 PF04286 Protein of unknown function (DUF445) YIM_RS45435 PF00155 Aminotransferase class I and II YIM_RS45450 PF00155 Aminotransferase class I and II YIM_RS45450 PF00392 Bacterial regulatory proteins, gntR family YIM_RS45480 PF00291 Pyridoxal-phosphate dependent enzyme YIM_RS45485 PF01425 Amidase YIM_RS45490 PF00440 Bacterial regulatory proteins, tetR family YIM_RS45490 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_RS45505 PF10425 C-terminus of bacterial fibrinogen-binding adhesin YIM_RS45505 PF04650 YSIRK type signal peptide YIM_RS45505 PF00746 LPXTG cell wall anchor motif YIM_RS45505 PF17961 Bacterial Ig domain YIM_RS45505 PF17210 SdrD B-like domain YIM_RS45515 PF00440 Bacterial regulatory proteins, tetR family YIM_RS45515 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS45525 PF10415 Fumarase C C-terminus YIM_RS45525 PF00206 Lyase YIM_RS45540 PF14659 Phage integrase, N-terminal SAM-like domain YIM_RS45540 PF00589 Phage integrase family YIM_RS45560 PF09397 Ftsk gamma domain YIM_RS45560 PF01580 FtsK/SpoIIIE family YIM_RS45560 PF17854 FtsK alpha domain YIM_RS45580 PF00392 Bacterial regulatory proteins, gntR family YIM_RS45580 PF07702 UTRA domain YIM_RS45585 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS45620 PF00313 'Cold-shock' DNA-binding domain YIM_RS45625 PF03734 L,D-transpeptidase catalytic domain YIM_RS45625 PF17964 Bacterial Ig domain YIM_RS45635 PF08281 Sigma-70, region 4 YIM_RS45635 PF04542 Sigma-70 region 2 YIM_RS45645 PF08946 Osmosensory transporter coiled coil YIM_RS45645 PF00083 Sugar (and other) transporter YIM_RS45655 PF00149 Calcineurin-like phosphoesterase YIM_RS45660 PF16918 Protein kinase G tetratricopeptide repeat YIM_RS45660 PF16919 Protein kinase G rubredoxin domain YIM_RS45660 PF00069 Protein kinase domain YIM_RS45665 PF00465 Iron-containing alcohol dehydrogenase YIM_RS45670 PF00171 Aldehyde dehydrogenase family YIM_RS45675 PF13378 Enolase C-terminal domain-like YIM_RS45675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_RS45680 PF09339 IclR helix-turn-helix domain YIM_RS45680 PF01614 Bacterial transcriptional regulator YIM_RS45685 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS45695 PF00072 Response regulator receiver domain YIM_RS45695 PF00196 Bacterial regulatory proteins, luxR family YIM_RS45700 PF07730 Histidine kinase YIM_RS45705 PF00313 'Cold-shock' DNA-binding domain YIM_RS45715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_RS45715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_RS45715 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_RS45725 PF00005 ABC transporter YIM_RS45730 PF00005 ABC transporter YIM_RS45730 PF00664 ABC transporter transmembrane region YIM_RS45740 PF00069 Protein kinase domain YIM_RS45745 PF00174 Oxidoreductase molybdopterin binding domain YIM_RS45790 PF00012 Hsp70 protein YIM_RS45805 PF07732 Multicopper oxidase YIM_RS45845 PF17926 Tetracyclin repressor-like, C-terminal domain YIM_RS45845 PF00440 Bacterial regulatory proteins, tetR family YIM_RS45850 PF00107 Zinc-binding dehydrogenase YIM_RS45850 PF08240 Alcohol dehydrogenase GroES-like domain YIM_RS45865 PF00440 Bacterial regulatory proteins, tetR family YIM_RS45890 PF00135 Carboxylesterase family YIM_RS45905 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_RS45905 PF00069 Protein kinase domain YIM_RS45935 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_RS45935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_RS45940 PF00892 EamA-like transporter family YIM_RS45955 PF01207 Dihydrouridine synthase (Dus) YIM_RS45975 PF01370 NAD dependent epimerase/dehydratase family YIM_RS45980 PF03756 A-factor biosynthesis hotdog domain YIM_RS45985 PF00440 Bacterial regulatory proteins, tetR family YIM_RS45990 PF00440 Bacterial regulatory proteins, tetR family YIM_RS45995 PF03704 Bacterial transcriptional activator domain YIM_RS46005 PF00975 Thioesterase domain YIM_RS46005 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS46005 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS46005 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS46005 PF00698 Acyl transferase domain YIM_RS46005 PF00550 Phosphopantetheine attachment site YIM_RS46005 PF08659 KR domain YIM_RS46005 PF08990 Erythronolide synthase docking YIM_RS46010 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_RS46010 PF00698 Acyl transferase domain YIM_RS46010 PF08990 Erythronolide synthase docking YIM_RS46010 PF00550 Phosphopantetheine attachment site YIM_RS46010 PF08659 KR domain YIM_RS46010 PF16197 Ketoacyl-synthetase C-terminal extension YIM_RS46010 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_RS46015 PF01895 PhoU domain YIM_RS46020 PF03816 Cell envelope-related transcriptional attenuator domain YIM_RS46030 PF00990 Diguanylate cyclase, GGDEF domain YIM_RS46040 PF00501 AMP-binding enzyme YIM_RS46040 PF01553 Acyltransferase YIM_RS46055 PF00892 EamA-like transporter family YIM_RS46065 PF00005 ABC transporter YIM_RS46070 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS46075 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS46080 PF12849 PBP superfamily domain YIM_RS46085 PF00583 Acetyltransferase (GNAT) family YIM_RS46090 PF00486 Transcriptional regulatory protein, C terminal YIM_RS46100 PF00085 Thioredoxin YIM_RS46110 PF00581 Rhodanese-like domain YIM_RS46115 PF07210 Protein of unknown function (DUF1416) YIM_RS46120 PF08768 Domain of unknown function (DUF1794) YIM_RS46125 PF02682 Carboxyltransferase domain, subdomain C and D YIM_RS46130 PF02626 Carboxyltransferase domain, subdomain A and B YIM_RS46140 PF01063 Amino-transferase class IV YIM_RS46170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_RS46170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_RS46180 PF00005 ABC transporter YIM_RS46215 PF01970 Tripartite tricarboxylate transporter TctA family YIM_RS46225 PF03401 Tripartite tricarboxylate transporter family receptor YIM_RS46230 PF17203 Single cache domain 3 YIM_RS46230 PF00989 PAS fold YIM_RS46230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS46230 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YIM_RS46235 PF00072 Response regulator receiver domain YIM_RS46245 PF03462 PCRF domain YIM_RS46245 PF00472 RF-1 domain YIM_RS46250 PF00586 AIR synthase related protein, N-terminal domain YIM_RS46250 PF02769 AIR synthase related protein, C-terminal domain YIM_RS46255 PF00156 Phosphoribosyl transferase domain YIM_RS46290 PF01183 Glycosyl hydrolases family 25 YIM_RS46295 PF01183 Glycosyl hydrolases family 25 YIM_RS46320 PF00586 AIR synthase related protein, N-terminal domain YIM_RS46320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YIM_RS46320 PF02769 AIR synthase related protein, C-terminal domain YIM_RS46325 PF00664 ABC transporter transmembrane region YIM_RS46325 PF00005 ABC transporter YIM_RS46330 PF00005 ABC transporter YIM_RS46330 PF00664 ABC transporter transmembrane region YIM_RS46340 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase YIM_RS46350 PF05199 GMC oxidoreductase YIM_RS46350 PF00732 GMC oxidoreductase YIM_RS46355 PF00171 Aldehyde dehydrogenase family YIM_RS46380 PF01925 Sulfite exporter TauE/SafE YIM_RS46390 PF00005 ABC transporter YIM_RS46395 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS46400 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS46405 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS46410 PF10397 Adenylosuccinate lyase C-terminus YIM_RS46410 PF00206 Lyase YIM_RS46435 PF01212 Beta-eliminating lyase YIM_RS46455 PF00155 Aminotransferase class I and II YIM_RS46460 PF03734 L,D-transpeptidase catalytic domain YIM_RS46460 PF17964 Bacterial Ig domain YIM_RS46465 PF01464 Transglycosylase SLT domain YIM_RS46475 PF00400 WD domain, G-beta repeat YIM_RS46475 PF00069 Protein kinase domain YIM_RS46480 PF13360 PQQ-like domain YIM_RS46480 PF00069 Protein kinase domain YIM_RS46510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YIM_RS46510 PF02843 Phosphoribosylglycinamide synthetase, C domain YIM_RS46510 PF02844 Phosphoribosylglycinamide synthetase, N domain YIM_RS46525 PF03009 Glycerophosphoryl diester phosphodiesterase family YIM_RS46530 PF07690 Major Facilitator Superfamily YIM_RS46540 PF00709 Adenylosuccinate synthetase YIM_RS46555 PF00440 Bacterial regulatory proteins, tetR family YIM_RS46555 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_RS46575 PF01116 Fructose-bisphosphate aldolase class-II YIM_RS46580 PF04607 Region found in RelA / SpoT proteins YIM_RS46580 PF13291 ACT domain YIM_RS46580 PF02824 TGS domain YIM_RS46605 PF01979 Amidohydrolase family YIM_RS46615 PF09335 SNARE associated Golgi protein YIM_RS46620 PF01565 FAD binding domain YIM_RS46620 PF02913 FAD linked oxidases, C-terminal domain YIM_RS46635 PF07690 Major Facilitator Superfamily YIM_RS46650 PF07690 Major Facilitator Superfamily YIM_RS46655 PF04264 YceI-like domain YIM_RS46660 PF09335 SNARE associated Golgi protein YIM_RS46675 PF07702 UTRA domain YIM_RS46675 PF00392 Bacterial regulatory proteins, gntR family YIM_RS46695 PF00005 ABC transporter YIM_RS46700 PF02653 Branched-chain amino acid transport system / permease component YIM_RS46705 PF13407 Periplasmic binding protein domain YIM_RS46710 PF00356 Bacterial regulatory proteins, lacI family YIM_RS46715 PF00356 Bacterial regulatory proteins, lacI family YIM_RS46725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_RS46725 PF00384 Molybdopterin oxidoreductase YIM_RS46725 PF01568 Molydopterin dinucleotide binding domain YIM_RS46730 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_RS46730 PF00588 SpoU rRNA Methylase family YIM_RS46745 PF00156 Phosphoribosyl transferase domain YIM_RS46750 PF00106 short chain dehydrogenase YIM_RS46760 PF02861 Clp amino terminal domain, pathogenicity island component YIM_RS46760 PF17871 AAA lid domain YIM_RS46760 PF07724 AAA domain (Cdc48 subfamily) YIM_RS46760 PF00004 ATPase family associated with various cellular activities (AAA) YIM_RS46760 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_RS46770 PF00175 Oxidoreductase NAD-binding domain YIM_RS46770 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS46770 PF00970 Oxidoreductase FAD-binding domain YIM_RS46775 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_RS46775 PF00970 Oxidoreductase FAD-binding domain YIM_RS46775 PF00175 Oxidoreductase NAD-binding domain YIM_RS46780 PF13411 MerR HTH family regulatory protein YIM_RS46785 PF00684 DnaJ central domain YIM_RS46785 PF01556 DnaJ C terminal domain YIM_RS46785 PF00226 DnaJ domain YIM_RS46790 PF01025 GrpE YIM_RS46795 PF00012 Hsp70 protein YIM_RS46800 PF00561 alpha/beta hydrolase fold YIM_RS46815 PF01161 Phosphatidylethanolamine-binding protein YIM_RS46830 PF00893 Small Multidrug Resistance protein YIM_RS46835 PF02754 Cysteine-rich domain YIM_RS46835 PF02665 Nitrate reductase gamma subunit YIM_RS46835 PF13183 4Fe-4S dicluster domain YIM_RS46840 PF02627 Carboxymuconolactone decarboxylase family YIM_RS46850 PF01037 Lrp/AsnC ligand binding domain YIM_RS46870 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_RS46870 PF00440 Bacterial regulatory proteins, tetR family YIM_RS46875 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS46875 PF18158 Adaptive response protein AidB N-terminal domain YIM_RS46875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS46880 PF00378 Enoyl-CoA hydratase/isomerase YIM_RS46885 PF00188 Cysteine-rich secretory protein family YIM_RS46895 PF00692 dUTPase YIM_RS46930 PF04545 Sigma-70, region 4 YIM_RS46930 PF04542 Sigma-70 region 2 YIM_RS46935 PF00565 Staphylococcal nuclease homologue YIM_RS46935 PF00746 LPXTG cell wall anchor motif YIM_RS46935 PF00149 Calcineurin-like phosphoesterase YIM_RS46935 PF02872 5'-nucleotidase, C-terminal domain YIM_RS46940 PF12697 Alpha/beta hydrolase family YIM_RS46955 PF03167 Uracil DNA glycosylase superfamily YIM_RS46960 PF00072 Response regulator receiver domain YIM_RS46960 PF00196 Bacterial regulatory proteins, luxR family YIM_RS46965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_RS46965 PF12806 Acetyl-CoA dehydrogenase C-terminal like YIM_RS46965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_RS46965 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_RS46990 PF00166 Chaperonin 10 Kd subunit YIM_RS46995 PF00578 AhpC/TSA family YIM_RS47010 PF00005 ABC transporter YIM_RS47015 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS47020 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_RS47025 PF04174 A circularly permuted ATPgrasp YIM_RS47035 PF01841 Transglutaminase-like superfamily YIM_RS47035 PF08379 Bacterial transglutaminase-like N-terminal region YIM_RS47040 PF01546 Peptidase family M20/M25/M40 YIM_RS47045 PF07687 Peptidase dimerisation domain YIM_RS47045 PF01546 Peptidase family M20/M25/M40 YIM_RS47050 PF00676 Dehydrogenase E1 component YIM_RS47055 PF02780 Transketolase, C-terminal domain YIM_RS47055 PF02779 Transketolase, pyrimidine binding domain YIM_RS47060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_RS47060 PF02817 e3 binding domain YIM_RS47060 PF00364 Biotin-requiring enzyme YIM_RS47065 PF17191 RecG wedge domain YIM_RS47065 PF13749 Putative ATP-dependent DNA helicase recG C-terminal YIM_RS47065 PF00270 DEAD/DEAH box helicase YIM_RS47075 PF00005 ABC transporter YIM_RS47075 PF00664 ABC transporter transmembrane region YIM_RS47085 PF04186 FxsA cytoplasmic membrane protein YIM_RS47100 PF00440 Bacterial regulatory proteins, tetR family YIM_RS47100 PF08359 YsiA-like protein, C-terminal region YIM_RS47105 PF01575 MaoC like domain YIM_RS47115 PF02803 Thiolase, C-terminal domain YIM_RS47115 PF00108 Thiolase, N-terminal domain YIM_RS47125 PF03009 Glycerophosphoryl diester phosphodiesterase family YIM_RS47130 PF13530 Sterol carrier protein domain YIM_RS47130 PF17668 Acetyltransferase (GNAT) domain YIM_RS47135 PF13411 MerR HTH family regulatory protein YIM_RS47135 PF07739 TipAS antibiotic-recognition domain YIM_RS47145 PF01047 MarR family YIM_RS47145 PF00583 Acetyltransferase (GNAT) family YIM_RS47165 PF00474 Sodium:solute symporter family YIM_RS47180 PF00561 alpha/beta hydrolase fold YIM_RS47205 PF00005 ABC transporter YIM_RS47210 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain YIM_RS47210 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain YIM_RS47230 PF01025 GrpE YIM_RS47240 PF01494 FAD binding domain YIM_RS47245 PF00350 Dynamin family YIM_RS47250 PF07730 Histidine kinase YIM_RS47255 PF00196 Bacterial regulatory proteins, luxR family YIM_RS47255 PF00072 Response regulator receiver domain YIM_RS47260 PF00005 ABC transporter YIM_RS47275 PF02390 Putative methyltransferase YIM_RS47285 PF00005 ABC transporter YIM_RS47295 PF00072 Response regulator receiver domain YIM_RS47295 PF00196 Bacterial regulatory proteins, luxR family YIM_RS47300 PF01979 Amidohydrolase family YIM_RS47315 PF00072 Response regulator receiver domain YIM_RS47315 PF00196 Bacterial regulatory proteins, luxR family YIM_RS47320 PF07730 Histidine kinase YIM_RS47330 PF00106 short chain dehydrogenase YIM_RS47335 PF07690 Major Facilitator Superfamily YIM_RS47345 PF13732 Domain of unknown function (DUF4162) YIM_RS47345 PF00005 ABC transporter YIM_RS47365 PF07690 Major Facilitator Superfamily YIM_RS47590 PF02223 Thymidylate kinase YIM_RS47595 PF04055 Radical SAM superfamily YIM_RS47595 PF01938 TRAM domain YIM_RS47595 PF00919 Uncharacterized protein family UPF0004 YIM_RS47640 PF13419 Haloacid dehalogenase-like hydrolase YIM_RS47645 PF00440 Bacterial regulatory proteins, tetR family YIM_RS47645 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS47650 PF03055 Retinal pigment epithelial membrane protein YIM_RS47670 PF01658 Myo-inositol-1-phosphate synthase YIM_RS47675 PF03551 Transcriptional regulator PadR-like family YIM_RS47680 PF17249 Family of unknown function (DUF5318) YIM_RS47685 PF00905 Penicillin binding protein transpeptidase domain YIM_RS47685 PF00912 Transglycosylase YIM_RS47690 PF01979 Amidohydrolase family YIM_RS47695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_RS47695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_RS47700 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_RS47700 PF00480 ROK family YIM_RS47715 PF01261 Xylose isomerase-like TIM barrel YIM_RS47735 PF01250 Ribosomal protein S6 YIM_RS47740 PF00436 Single-strand binding protein family YIM_RS47745 PF01084 Ribosomal protein S18 YIM_RS47750 PF01281 Ribosomal protein L9, N-terminal domain YIM_RS47750 PF03948 Ribosomal protein L9, C-terminal domain YIM_RS47775 PF00772 DnaB-like helicase N terminal domain YIM_RS47775 PF00772 DnaB-like helicase N terminal domain YIM_RS47775 PF14528 LAGLIDADG-like domain YIM_RS47775 PF03796 DnaB-like helicase C terminal domain YIM_RS47775 PF14528 LAGLIDADG-like domain YIM_RS47775 PF03796 DnaB-like helicase C terminal domain YIM_RS47780 PF01494 FAD binding domain YIM_RS47790 PF00561 alpha/beta hydrolase fold YIM_RS47805 PF00561 alpha/beta hydrolase fold YIM_RS47830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YIM_RS47845 PF01594 AI-2E family transporter YIM_RS47855 PF00072 Response regulator receiver domain YIM_RS47855 PF00196 Bacterial regulatory proteins, luxR family YIM_RS47870 PF05524 PEP-utilising enzyme, N-terminal YIM_RS47870 PF00391 PEP-utilising enzyme, mobile domain YIM_RS47870 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_RS47880 PF00294 pfkB family carbohydrate kinase YIM_RS47900 PF00440 Bacterial regulatory proteins, tetR family YIM_RS47900 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_RS47915 PF08264 Anticodon-binding domain of tRNA YIM_RS47915 PF13603 Leucyl-tRNA synthetase, Domain 2 YIM_RS47915 PF09334 tRNA synthetases class I (M) YIM_RS47930 PF02622 Uncharacterized ACR, COG1678 YIM_RS47935 PF07690 Major Facilitator Superfamily YIM_RS47990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_RS47990 PF07730 Histidine kinase YIM_RS47990 PF13492 GAF domain YIM_RS47995 PF01743 Poly A polymerase head domain YIM_RS47995 PF12627 Probable RNA and SrmB- binding site of polymerase A YIM_RS47995 PF13735 tRNA nucleotidyltransferase domain 2 putative YIM_RS48000 PF00293 NUDIX domain YIM_RS48015 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS48020 PF00528 Binding-protein-dependent transport system inner membrane component YIM_RS48025 PF03023 Lipid II flippase MurJ YIM_RS48035 PF08281 Sigma-70, region 4 YIM_RS48035 PF04542 Sigma-70 region 2 YIM_RS48045 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS48050 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_RS48050 PF00085 Thioredoxin YIM_RS48055 PF01520 N-acetylmuramoyl-L-alanine amidase YIM_RS48055 PF01471 Putative peptidoglycan binding domain YIM_RS48065 PF00155 Aminotransferase class I and II YIM_RS48070 PF01820 D-ala D-ala ligase N-terminus YIM_RS48070 PF07478 D-ala D-ala ligase C-terminus YIM_RS48075 PF17762 HTH domain found in ParB protein YIM_RS48075 PF02195 ParB-like nuclease domain YIM_RS48080 PF13614 AAA domain YIM_RS48085 PF02527 rRNA small subunit methyltransferase G YIM_RS48090 PF13350 Tyrosine phosphatase family YIM_RS48100 PF02096 60Kd inner membrane protein YIM_RS48105 PF01809 Putative membrane protein insertion efficiency factor YIM_RS48115 PF00468 Ribosomal protein L34