APRE_RS00005 SM00382 ATPases associated with a variety of cellular activities APRE_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain APRE_RS00010 SM00480 DNA polymerase III beta subunit APRE_RS00025 SM00387 Histidine kinase-like ATPases APRE_RS00025 SM00433 TopoisomeraseII APRE_RS00030 SM00434 DNA Topoisomerase IV APRE_RS00090 SM00382 ATPases associated with a variety of cellular activities APRE_RS00095 SM00382 ATPases associated with a variety of cellular activities APRE_RS00135 SM00342 helix_turn_helix, arabinose operon control protein APRE_RS00150 SM00382 ATPases associated with a variety of cellular activities APRE_RS00150 SM01086 C-terminal, D2-small domain, of ClpB protein APRE_RS00175 SM00420 helix_turn_helix, Deoxyribose operon repressor APRE_RS00175 SM01134 APRE_RS00175 APRE_RS00180 SM01133 APRE_RS00180 APRE_RS00195 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain APRE_RS00220 SM00382 ATPases associated with a variety of cellular activities APRE_RS00225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APRE_RS00265 SM00382 ATPases associated with a variety of cellular activities APRE_RS00320 SM00382 ATPases associated with a variety of cellular activities APRE_RS00330 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS00385 SM00420 helix_turn_helix, Deoxyribose operon repressor APRE_RS00385 SM01134 APRE_RS00385 APRE_RS00400 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS00400 SM00866 APRE_RS00400 APRE_RS00415 SM01133 APRE_RS00415 APRE_RS00430 SM00849 Metallo-beta-lactamase superfamily APRE_RS00450 SM00448 cheY-homologous receiver domain APRE_RS00450 SM00862 Transcriptional regulatory protein, C terminal APRE_RS00455 SM00387 Histidine kinase-like ATPases APRE_RS00455 SM00388 His Kinase A (phosphoacceptor) domain APRE_RS00555 SM00831 Cation transporter/ATPase, N-terminus APRE_RS00570 SM00354 helix_turn _helix lactose operon repressor APRE_RS00650 SM00382 ATPases associated with a variety of cellular activities APRE_RS00650 SM01086 C-terminal, D2-small domain, of ClpB protein APRE_RS00680 SM00382 ATPases associated with a variety of cellular activities APRE_RS00695 SM00382 ATPases associated with a variety of cellular activities APRE_RS00700 SM00900 APRE_RS00700 APRE_RS00705 SM00900 APRE_RS00705 APRE_RS00725 SM00382 ATPases associated with a variety of cellular activities APRE_RS00760 SM00872 Alpha mannosidase, middle domain APRE_RS00765 SM01149 APRE_RS00765 APRE_RS00860 SM00382 ATPases associated with a variety of cellular activities APRE_RS00865 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS00870 SM00382 ATPases associated with a variety of cellular activities APRE_RS00880 SM00046 Diacylglycerol kinase catalytic domain (presumed) APRE_RS00885 SM01058 CarD-like/TRCF domain APRE_RS00890 SM00670 Large family of predicted nucleotide-binding domains APRE_RS00915 SM00855 Phosphoglycerate mutase family APRE_RS00920 SM00862 Transcriptional regulatory protein, C terminal APRE_RS00955 SM00245 tail specific protease APRE_RS00960 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APRE_RS00975 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS00980 SM00382 ATPases associated with a variety of cellular activities APRE_RS01005 SM01264 APRE_RS01005 APRE_RS01040 SM00838 Elongation factor G C-terminus APRE_RS01040 SM00889 Elongation factor G, domain IV APRE_RS01045 SM00642 Alpha-amylase domain APRE_RS01190 SM00244 prohibitin homologues APRE_RS01205 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS01210 SM00382 ATPases associated with a variety of cellular activities APRE_RS01250 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS01260 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS01270 SM00382 ATPases associated with a variety of cellular activities APRE_RS01280 SM00919 Malic enzyme, NAD binding domain APRE_RS01280 SM01274 APRE_RS01280 APRE_RS01295 SM00849 Metallo-beta-lactamase superfamily APRE_RS01315 SM00342 helix_turn_helix, arabinose operon control protein APRE_RS01340 SM00642 Alpha-amylase domain APRE_RS01345 SM00382 ATPases associated with a variety of cellular activities APRE_RS01350 SM00642 Alpha-amylase domain APRE_RS01380 SM00287 Bacterial SH3 domain homologues APRE_RS01395 SM00382 ATPases associated with a variety of cellular activities APRE_RS01465 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APRE_RS01465 SM00245 tail specific protease APRE_RS01470 SM00116 Domain in cystathionine beta-synthase and other proteins. APRE_RS01470 SM00924 MgtE intracellular N domain APRE_RS01490 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS01490 SM00876 Biotin and Thiamin Synthesis associated domain APRE_RS01500 SM00876 Biotin and Thiamin Synthesis associated domain APRE_RS01505 SM00382 ATPases associated with a variety of cellular activities APRE_RS01505 SM00930 APRE_RS01505 APRE_RS01575 SM00382 ATPases associated with a variety of cellular activities APRE_RS01620 SM00382 ATPases associated with a variety of cellular activities APRE_RS01715 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS01850 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS01865 SM01252 APRE_RS01865 APRE_RS01890 SM00487 DEAD-like helicases superfamily APRE_RS01900 SM00382 ATPases associated with a variety of cellular activities APRE_RS01910 SM00382 ATPases associated with a variety of cellular activities APRE_RS01915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APRE_RS01930 SM00226 Low molecular weight phosphatase family APRE_RS01945 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APRE_RS02025 SM00382 ATPases associated with a variety of cellular activities APRE_RS02025 SM00994 ClpX C4-type zinc finger APRE_RS02025 SM01086 C-terminal, D2-small domain, of ClpB protein APRE_RS02030 SM00382 ATPases associated with a variety of cellular activities APRE_RS02030 SM00464 Found in ATP-dependent protease La (LON) APRE_RS02040 SM00900 APRE_RS02040 APRE_RS02055 SM00420 helix_turn_helix, Deoxyribose operon repressor APRE_RS02055 SM01134 APRE_RS02055 APRE_RS02100 SM00382 ATPases associated with a variety of cellular activities APRE_RS02105 SM00382 ATPases associated with a variety of cellular activities APRE_RS02120 SM01091 Transporter associated domain APRE_RS02125 SM00116 Domain in cystathionine beta-synthase and other proteins. APRE_RS02125 SM01131 APRE_RS02125 APRE_RS02170 SM00481 DNA polymerase alpha chain like domain APRE_RS02185 SM00382 ATPases associated with a variety of cellular activities APRE_RS02200 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain APRE_RS02235 SM00382 ATPases associated with a variety of cellular activities APRE_RS02240 SM00382 ATPases associated with a variety of cellular activities APRE_RS02245 SM00347 helix_turn_helix multiple antibiotic resistance protein APRE_RS02285 SM00155 Phospholipase D. Active site motifs. APRE_RS02290 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS02295 SM00382 ATPases associated with a variety of cellular activities APRE_RS02330 SM00287 Bacterial SH3 domain homologues APRE_RS02350 SM01230 APRE_RS02350 APRE_RS02375 SM00663 RNA polymerase I subunit A N-terminus APRE_RS02435 SM00838 Elongation factor G C-terminus APRE_RS02435 SM00889 Elongation factor G, domain IV APRE_RS02450 SM00382 ATPases associated with a variety of cellular activities APRE_RS02475 SM00382 ATPases associated with a variety of cellular activities APRE_RS02480 SM00382 ATPases associated with a variety of cellular activities APRE_RS02510 SM00642 Alpha-amylase domain APRE_RS02530 SM00382 ATPases associated with a variety of cellular activities APRE_RS02585 SM00062 Bacterial periplasmic substrate-binding proteins APRE_RS02585 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APRE_RS02590 SM00382 ATPases associated with a variety of cellular activities APRE_RS02650 SM00382 ATPases associated with a variety of cellular activities APRE_RS02665 SM00849 Metallo-beta-lactamase superfamily APRE_RS02715 SM00487 DEAD-like helicases superfamily APRE_RS02715 SM00974 APRE_RS02715 APRE_RS02730 SM00382 ATPases associated with a variety of cellular activities APRE_RS02785 SM00382 ATPases associated with a variety of cellular activities APRE_RS02835 SM00382 ATPases associated with a variety of cellular activities APRE_RS02865 SM00822 APRE_RS02865 APRE_RS02875 SM01060 APRE_RS02875 APRE_RS02905 SM00382 ATPases associated with a variety of cellular activities APRE_RS02910 SM00271 DnaJ molecular chaperone homology domain APRE_RS02955 SM00450 Rhodanese Homology Domain APRE_RS02955 SM00645 Papain family cysteine protease APRE_RS02970 SM01095 Cpl-7 lysozyme C-terminal domain APRE_RS02995 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS03065 SM00363 S4 RNA-binding domain APRE_RS03070 SM00382 ATPases associated with a variety of cellular activities APRE_RS03075 SM00382 ATPases associated with a variety of cellular activities APRE_RS03090 SM00966 SpoVT / AbrB like domain APRE_RS03105 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS03140 SM00479 APRE_RS03140 APRE_RS03150 SM01208 APRE_RS03150 APRE_RS03165 SM00382 ATPases associated with a variety of cellular activities APRE_RS03185 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS03185 SM00322 K homology RNA-binding domain APRE_RS03215 SM00904 Riboflavin kinase APRE_RS03220 SM01387 APRE_RS03220 APRE_RS03225 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS03225 SM00322 K homology RNA-binding domain APRE_RS03230 SM00382 ATPases associated with a variety of cellular activities APRE_RS03230 SM00843 APRE_RS03230 APRE_RS03240 SM00382 ATPases associated with a variety of cellular activities APRE_RS03250 SM00363 S4 RNA-binding domain APRE_RS03260 SM00977 TilS substrate C-terminal domain APRE_RS03305 SM00046 Diacylglycerol kinase catalytic domain (presumed) APRE_RS03325 SM00382 ATPases associated with a variety of cellular activities APRE_RS03330 SM00854 Bacterial capsule synthesis protein PGA_cap APRE_RS03335 SM00014 Acid phosphatase homologues APRE_RS03355 SM00382 ATPases associated with a variety of cellular activities APRE_RS03360 SM00448 cheY-homologous receiver domain APRE_RS03360 SM00862 Transcriptional regulatory protein, C terminal APRE_RS03365 SM00387 Histidine kinase-like ATPases APRE_RS03440 SM00358 Double-stranded RNA binding motif APRE_RS03440 SM00535 Ribonuclease III family APRE_RS03445 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS03450 SM00968 SMC proteins Flexible Hinge Domain APRE_RS03475 SM00331 Sigma factor PP2C-like phosphatases APRE_RS03475 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APRE_RS03480 SM00220 Serine/Threonine protein kinases, catalytic domain APRE_RS03480 SM00740 APRE_RS03480 APRE_RS03520 SM00481 DNA polymerase alpha chain like domain APRE_RS03580 SM00382 ATPases associated with a variety of cellular activities APRE_RS03585 SM00382 ATPases associated with a variety of cellular activities APRE_RS03595 SM00382 ATPases associated with a variety of cellular activities APRE_RS03600 SM00382 ATPases associated with a variety of cellular activities APRE_RS03605 SM00857 Resolvase, N terminal domain APRE_RS03645 SM00382 ATPases associated with a variety of cellular activities APRE_RS03660 SM00529 Helix-turn-helix diphteria tox regulatory element APRE_RS03665 SM00342 helix_turn_helix, arabinose operon control protein APRE_RS03670 SM00382 ATPases associated with a variety of cellular activities APRE_RS03675 SM00382 ATPases associated with a variety of cellular activities APRE_RS03800 SM00910 APRE_RS03800 APRE_RS03810 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS03830 SM00448 cheY-homologous receiver domain APRE_RS03830 SM00862 Transcriptional regulatory protein, C terminal APRE_RS03835 SM00387 Histidine kinase-like ATPases APRE_RS03835 SM00388 His Kinase A (phosphoacceptor) domain APRE_RS03840 SM00382 ATPases associated with a variety of cellular activities APRE_RS03865 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS03865 SM00732 Likely ribonuclease with RNase H fold. APRE_RS03880 SM00357 Cold shock protein domain APRE_RS03880 SM00382 ATPases associated with a variety of cellular activities APRE_RS03880 SM00959 Rho termination factor, N-terminal domain APRE_RS03895 SM00937 APRE_RS03895 APRE_RS03920 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APRE_RS03935 SM00478 endonuclease III APRE_RS03955 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APRE_RS03970 SM01192 APRE_RS03970 APRE_RS03970 SM01193 APRE_RS03970 APRE_RS03980 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS03980 SM00357 Cold shock protein domain APRE_RS03980 SM00955 APRE_RS03980 APRE_RS03995 SM00382 ATPases associated with a variety of cellular activities APRE_RS04005 SM00855 Phosphoglycerate mutase family APRE_RS04045 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APRE_RS04065 SM00047 Lysozyme subfamily 2 APRE_RS04070 SM00642 Alpha-amylase domain APRE_RS04075 SM00116 Domain in cystathionine beta-synthase and other proteins. APRE_RS04085 SM00382 ATPases associated with a variety of cellular activities APRE_RS04095 SM00493 APRE_RS04095 APRE_RS04105 SM00640 Glycosyl hydrolases family 32 APRE_RS04120 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS04125 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS04180 SM00382 ATPases associated with a variety of cellular activities APRE_RS04265 SM00470 ParB-like nuclease domain APRE_RS04465 SM00642 Alpha-amylase domain APRE_RS04475 SM00240 Forkhead associated domain APRE_RS04510 SM00354 helix_turn _helix lactose operon repressor APRE_RS04535 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS04555 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS04580 SM00448 cheY-homologous receiver domain APRE_RS04580 SM00862 Transcriptional regulatory protein, C terminal APRE_RS04585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APRE_RS04585 SM00387 Histidine kinase-like ATPases APRE_RS04585 SM00388 His Kinase A (phosphoacceptor) domain APRE_RS04625 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APRE_RS04630 SM00382 ATPases associated with a variety of cellular activities APRE_RS04645 SM01323 APRE_RS04645 APRE_RS04655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APRE_RS04655 SM00954 Region found in RelA / SpoT proteins APRE_RS04665 SM00849 Metallo-beta-lactamase superfamily APRE_RS04690 SM01207 APRE_RS04690 APRE_RS04705 SM00363 S4 RNA-binding domain APRE_RS04715 SM00986 Uracil DNA glycosylase superfamily APRE_RS04715 SM00987 UreE urease accessory protein, C-terminal domain APRE_RS04730 SM00981 APRE_RS04730 APRE_RS04755 SM01103 APRE_RS04755 APRE_RS04765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APRE_RS04775 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APRE_RS04785 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APRE_RS04795 SM00732 Likely ribonuclease with RNase H fold. APRE_RS04810 SM00849 Metallo-beta-lactamase superfamily APRE_RS04845 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APRE_RS04845 SM00534 ATPase domain of DNA mismatch repair MUTS family APRE_RS04850 SM00853 MutL C terminal dimerisation domain APRE_RS04850 SM01340 APRE_RS04850 APRE_RS04870 SM00322 K homology RNA-binding domain APRE_RS04870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APRE_RS04895 SM00382 ATPases associated with a variety of cellular activities APRE_RS04895 SM00962 SRP54-type protein, GTPase domain APRE_RS04895 SM00963 SRP54-type protein, helical bundle domain APRE_RS04900 SM00487 DEAD-like helicases superfamily APRE_RS04900 SM00490 helicase superfamily c-terminal domain APRE_RS04910 SM01409 APRE_RS04910 APRE_RS04915 SM00072 Guanylate kinase homologues. APRE_RS04925 SM00411 bacterial (prokaryotic) histone like domain APRE_RS04940 SM00487 DEAD-like helicases superfamily APRE_RS04940 SM00490 helicase superfamily c-terminal domain APRE_RS04940 SM00982 APRE_RS04940 APRE_RS04940 SM01058 CarD-like/TRCF domain APRE_RS04950 SM01400 APRE_RS04950 APRE_RS04980 SM01005 Alanine racemase, C-terminal domain APRE_RS04995 SM00845 GatB domain APRE_RS05010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APRE_RS05010 SM00292 breast cancer carboxy-terminal domain APRE_RS05010 SM00532 Ligase N family APRE_RS05085 SM00488 APRE_RS05085 APRE_RS05085 SM00491 APRE_RS05085 APRE_RS05120 SM00382 ATPases associated with a variety of cellular activities APRE_RS05120 SM01086 C-terminal, D2-small domain, of ClpB protein APRE_RS05125 SM00271 DnaJ molecular chaperone homology domain APRE_RS05165 SM00382 ATPases associated with a variety of cellular activities APRE_RS05200 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS05205 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS05210 SM00563 Phosphate acyltransferases APRE_RS05225 SM00363 S4 RNA-binding domain APRE_RS05245 SM00382 ATPases associated with a variety of cellular activities APRE_RS05280 SM00841 Elongation factor P, C-terminal APRE_RS05280 SM01185 APRE_RS05280 APRE_RS05305 SM00487 DEAD-like helicases superfamily APRE_RS05305 SM00490 helicase superfamily c-terminal domain APRE_RS05310 SM01120 APRE_RS05310 APRE_RS05310 SM01121 APRE_RS05310 APRE_RS05320 SM00890 Domain of unknown function APRE_RS05330 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APRE_RS05330 SM00465 GIY-YIG type nucleases (URI domain) APRE_RS05425 SM00890 Domain of unknown function APRE_RS05450 SM00116 Domain in cystathionine beta-synthase and other proteins. APRE_RS05450 SM00924 MgtE intracellular N domain APRE_RS05515 SM01120 APRE_RS05515 APRE_RS05525 SM00487 DEAD-like helicases superfamily APRE_RS05525 SM00490 helicase superfamily c-terminal domain APRE_RS05535 SM00902 Iron hydrogenase small subunit APRE_RS05535 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APRE_RS05540 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APRE_RS05565 SM00382 ATPases associated with a variety of cellular activities APRE_RS05570 SM00387 Histidine kinase-like ATPases APRE_RS05575 SM00448 cheY-homologous receiver domain APRE_RS05575 SM00862 Transcriptional regulatory protein, C terminal APRE_RS05585 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS05615 SM01329 APRE_RS05615 APRE_RS05635 SM01001 AIR carboxylase APRE_RS05640 SM00116 Domain in cystathionine beta-synthase and other proteins. APRE_RS05640 SM01240 APRE_RS05640 APRE_RS05645 SM01209 APRE_RS05645 APRE_RS05645 SM01210 APRE_RS05645 APRE_RS05645 SM01211 APRE_RS05645 APRE_RS05650 SM00798 AICARFT/IMPCHase bienzyme APRE_RS05650 SM00851 MGS-like domain APRE_RS05700 SM01208 APRE_RS05700 APRE_RS05765 SM00287 Bacterial SH3 domain homologues APRE_RS05785 SM00400 zinc finger APRE_RS05785 SM00493 APRE_RS05785 APRE_RS05790 SM00342 helix_turn_helix, arabinose operon control protein APRE_RS05845 SM00649 Ribosomal protein L11/L12 APRE_RS05850 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APRE_RS05850 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APRE_RS05930 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS05935 SM00271 DnaJ molecular chaperone homology domain APRE_RS05990 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS06010 SM00986 Uracil DNA glycosylase superfamily APRE_RS06010 SM00987 UreE urease accessory protein, C-terminal domain APRE_RS06015 SM00838 Elongation factor G C-terminus APRE_RS06035 SM00849 Metallo-beta-lactamase superfamily APRE_RS06045 SM00382 ATPases associated with a variety of cellular activities APRE_RS06050 SM00382 ATPases associated with a variety of cellular activities APRE_RS06060 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS06100 SM00382 ATPases associated with a variety of cellular activities APRE_RS06110 SM00864 Tubulin/FtsZ family, GTPase domain APRE_RS06110 SM00865 Tubulin/FtsZ family, C-terminal domain APRE_RS06180 SM00448 cheY-homologous receiver domain APRE_RS06180 SM00862 Transcriptional regulatory protein, C terminal APRE_RS06185 SM00387 Histidine kinase-like ATPases APRE_RS06185 SM00388 His Kinase A (phosphoacceptor) domain APRE_RS06205 SM00487 DEAD-like helicases superfamily APRE_RS06205 SM00490 helicase superfamily c-terminal domain APRE_RS06225 SM00347 helix_turn_helix multiple antibiotic resistance protein APRE_RS06230 SM00854 Bacterial capsule synthesis protein PGA_cap APRE_RS06250 SM00382 ATPases associated with a variety of cellular activities APRE_RS06290 SM00450 Rhodanese Homology Domain APRE_RS06295 SM00357 Cold shock protein domain APRE_RS06345 SM00957 SecA DEAD-like domain APRE_RS06345 SM00958 SecA preprotein cross-linking domain APRE_RS06380 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS06380 SM00984 UDP binding domain APRE_RS06415 SM00901 APRE_RS06415 APRE_RS06430 SM01209 APRE_RS06430 APRE_RS06440 SM01209 APRE_RS06440 APRE_RS06490 SM00642 Alpha-amylase domain APRE_RS06520 SM00936 Penicillin-binding protein 5, C-terminal domain APRE_RS06540 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APRE_RS06540 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APRE_RS06540 SM00493 APRE_RS06540 APRE_RS06575 SM00382 ATPases associated with a variety of cellular activities APRE_RS06580 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS06610 SM00382 ATPases associated with a variety of cellular activities APRE_RS06610 SM00962 SRP54-type protein, GTPase domain APRE_RS06610 SM00963 SRP54-type protein, helical bundle domain APRE_RS06635 SM00382 ATPases associated with a variety of cellular activities APRE_RS06720 SM00900 APRE_RS06720 APRE_RS06745 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APRE_RS06745 SM00474 3'-5' exonuclease APRE_RS06745 SM00475 5'-3' exonuclease APRE_RS06745 SM00482 DNA polymerase A domain APRE_RS06835 SM00028 Tetratricopeptide repeats APRE_RS06845 SM00836 DALR anticodon binding domain APRE_RS06845 SM01016 Arginyl tRNA synthetase N terminal dom APRE_RS06850 SM00463 Small MutS-related domain APRE_RS06850 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APRE_RS06850 SM00534 ATPase domain of DNA mismatch repair MUTS family APRE_RS06865 SM00873 B3/4 domain APRE_RS06865 SM00874 tRNA synthetase B5 domain APRE_RS06865 SM00896 Ferredoxin-fold anticodon binding domain APRE_RS06875 SM00967 RNA 2'-O ribose methyltransferase substrate binding APRE_RS06895 SM00347 helix_turn_helix multiple antibiotic resistance protein APRE_RS06940 SM00893 Electron transfer flavoprotein domain APRE_RS06945 SM00893 Electron transfer flavoprotein domain APRE_RS06975 SM00422 helix_turn_helix, mercury resistance APRE_RS07015 SM00382 ATPases associated with a variety of cellular activities APRE_RS07020 SM00382 ATPases associated with a variety of cellular activities APRE_RS07025 SM00347 helix_turn_helix multiple antibiotic resistance protein APRE_RS07055 SM00387 Histidine kinase-like ATPases APRE_RS07055 SM00388 His Kinase A (phosphoacceptor) domain APRE_RS07060 SM00448 cheY-homologous receiver domain APRE_RS07060 SM00862 Transcriptional regulatory protein, C terminal APRE_RS07070 SM00382 ATPases associated with a variety of cellular activities APRE_RS07110 SM00354 helix_turn _helix lactose operon repressor APRE_RS07115 SM00478 endonuclease III APRE_RS07205 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS07210 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APRE_RS07210 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APRE_RS07230 SM00487 DEAD-like helicases superfamily APRE_RS07230 SM00490 helicase superfamily c-terminal domain APRE_RS07235 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APRE_RS07260 SM00341 Helicase and RNase D C-terminal APRE_RS07260 SM00487 DEAD-like helicases superfamily APRE_RS07260 SM00490 helicase superfamily c-terminal domain APRE_RS07260 SM00956 APRE_RS07260 APRE_RS07285 SM00382 ATPases associated with a variety of cellular activities APRE_RS07290 SM00382 ATPases associated with a variety of cellular activities APRE_RS07310 SM01092 CO dehydrogenase flavoprotein C-terminal domain APRE_RS07315 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APRE_RS07370 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS07370 SM00895 APRE_RS07370 APRE_RS07375 SM00852 Probable molybdopterin binding domain APRE_RS07380 SM00852 Probable molybdopterin binding domain APRE_RS07395 SM00729 Elongator protein 3, MiaB family, Radical SAM APRE_RS07400 SM00382 ATPases associated with a variety of cellular activities APRE_RS07490 SM00899 APRE_RS07490 APRE_RS07495 SM00899 APRE_RS07495 APRE_RS07530 SM00382 ATPases associated with a variety of cellular activities APRE_RS07535 SM00881 CoA binding domain APRE_RS07545 SM00838 Elongation factor G C-terminus APRE_RS07595 SM00382 ATPases associated with a variety of cellular activities APRE_RS07705 SM00883 Chaperonin 10 Kd subunit APRE_RS07745 SM00650 Ribosomal RNA adenine dimethylases APRE_RS07750 SM00493 APRE_RS07750 APRE_RS07770 SM00363 S4 RNA-binding domain APRE_RS07775 SM01266 APRE_RS07775 APRE_RS07780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APRE_RS07785 SM00382 ATPases associated with a variety of cellular activities APRE_RS07790 SM00382 ATPases associated with a variety of cellular activities APRE_RS07795 SM00421 helix_turn_helix, Lux Regulon APRE_RS07795 SM00448 cheY-homologous receiver domain APRE_RS07815 SM00382 ATPases associated with a variety of cellular activities APRE_RS07860 SM00062 Bacterial periplasmic substrate-binding proteins APRE_RS07865 SM00382 ATPases associated with a variety of cellular activities APRE_RS07885 SM00642 Alpha-amylase domain APRE_RS07890 SM01133 APRE_RS07890 APRE_RS07895 SM00331 Sigma factor PP2C-like phosphatases APRE_RS07935 SM00662 RNA polymerases D APRE_RS07940 SM00363 S4 RNA-binding domain APRE_RS07940 SM01390 APRE_RS07940 APRE_RS07960 SM00316 Ribosomal protein S1-like RNA-binding domain APRE_RS08015 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APRE_RS08020 SM01374 APRE_RS08020 APRE_RS08040 SM00322 K homology RNA-binding domain APRE_RS08055 SM01382 APRE_RS08055 APRE_RS08055 SM01383 APRE_RS08055 APRE_RS08075 SM01403 APRE_RS08075 APRE_RS08095 SM01208 APRE_RS08095 APRE_RS08100 SM00100 Cyclic nucleotide-monophosphate binding domain APRE_RS08100 SM00419 helix_turn_helix, cAMP Regulatory protein APRE_RS08215 SM00642 Alpha-amylase domain APRE_RS08265 SM00829 Enoylreductase APRE_RS08270 SM00345 helix_turn_helix gluconate operon transcriptional repressor APRE_RS08275 SM00861 Transketolase, pyrimidine binding domain APRE_RS08295 SM00382 ATPases associated with a variety of cellular activities APRE_RS08310 SM00354 helix_turn _helix lactose operon repressor APRE_RS08350 SM00876 Biotin and Thiamin Synthesis associated domain APRE_RS08395 SM00382 ATPases associated with a variety of cellular activities APRE_RS08415 SM00967 RNA 2'-O ribose methyltransferase substrate binding APRE_RS08420 SM00840 APRE_RS08420 APRE_RS08445 SM00850 LytTr DNA-binding domain APRE_RS08470 SM00530 Helix-turn-helix XRE-family like proteins APRE_RS08515 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APRE_RS08555 SM00382 ATPases associated with a variety of cellular activities APRE_RS08580 SM00450 Rhodanese Homology Domain APRE_RS08595 SM00347 helix_turn_helix multiple antibiotic resistance protein APRE_RS08610 SM01091 Transporter associated domain APRE_RS08720 SM01001 AIR carboxylase APRE_RS08745 SM00382 ATPases associated with a variety of cellular activities APRE_RS08765 SM00382 ATPases associated with a variety of cellular activities APRE_RS08770 SM00347 helix_turn_helix multiple antibiotic resistance protein APRE_RS08815 SM00470 ParB-like nuclease domain APRE_RS08825 SM00852 Probable molybdopterin binding domain APRE_RS08840 SM01228 APRE_RS08840 APRE_RS08855 SM00393 Putative single-stranded nucleic acids-binding domain APRE_RS08855 SM01245 APRE_RS08855