APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 SMART SM00729 10 210 3.1E-8 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 Pfam PF06463 Molybdenum Cofactor Synthesis C 180 295 2.3E-25 T 20-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 Gene3D G3DSA:3.20.20.70 2 291 9.8E-73 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 PANTHER PTHR22960 3 270 1.5E-101 T 20-04-2016 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 SUPERFAMILY SSF102114 3 266 7.98E-69 T 20-04-2016 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 Pfam PF13353 4Fe-4S single cluster domain 17 120 5.1E-8 T 20-04-2016 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 312 3.6E-101 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 1 312 35.28 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 20-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APRE_RS07395 735844f8fccd5255a4bcdff6e7939ce8 312 Pfam PF04055 Radical SAM superfamily 14 173 5.4E-32 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 229 355 5.4E-13 T 20-04-2016 IPR026466 Fimbrial isopeptide formation D2 domain APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 Pfam PF16555 Gram-positive pilin subunit D1, N-terminal 34 207 4.0E-16 T 20-04-2016 IPR032364 Gram-positive pilin subunit D1, N-terminal APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 Pfam PF05738 Cna protein B-type domain 609 660 4.2E-6 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 697 725 4.9E-5 T 20-04-2016 IPR019931 LPXTG cell wall anchor domain APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 Pfam PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain 246 358 2.7E-13 T 20-04-2016 IPR032334 Gram-positive pilin backbone subunit 2, Cna-B-like domain APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 Pfam PF00746 Gram positive anchor 697 725 2.8E-5 T 20-04-2016 IPR019948 Gram-positive anchor APRE_RS07465 f86aee78d125be5e56fd2c5e03f55e9d 730 Pfam PF16570 Gram-positive pilin backbone subunit 3, Cna-B-like domain 372 533 8.8E-68 T 20-04-2016 IPR032332 Gram-positive pilin backbone subunit 3, Cna-B-like domain APRE_RS05905 f64297985094f0b511d03e380efbad51 399 PIRSF PIRSF001259 1 398 5.5E-157 T 20-04-2016 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 209 392 5.2E-78 T 20-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 199 395 41.164 T 20-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 196 1.0E-73 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 195 6.8E-81 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 Pfam PF00925 GTP cyclohydrolase II 209 369 8.4E-70 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 200 36.551 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 PANTHER PTHR21327:SF6 1 394 7.9E-208 T 20-04-2016 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 SUPERFAMILY SSF142695 208 371 1.96E-61 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 PANTHER PTHR21327 1 394 7.9E-208 T 20-04-2016 APRE_RS05905 f64297985094f0b511d03e380efbad51 399 SUPERFAMILY SSF55821 2 198 2.52E-78 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APRE_RS05905 f64297985094f0b511d03e380efbad51 399 Gene3D G3DSA:3.90.870.10 1 200 2.3E-87 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APRE_RS03090 07cdbd702676cc376eec678e8fb04773 85 Gene3D G3DSA:2.10.260.10 11 61 2.3E-9 T 20-04-2016 APRE_RS03090 07cdbd702676cc376eec678e8fb04773 85 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 43 1.5E-9 T 20-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APRE_RS03090 07cdbd702676cc376eec678e8fb04773 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 43 1.2E-7 T 20-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APRE_RS03090 07cdbd702676cc376eec678e8fb04773 85 SUPERFAMILY SSF89447 4 59 1.74E-10 T 20-04-2016 APRE_RS03090 07cdbd702676cc376eec678e8fb04773 85 SMART SM00966 3 48 1.2E-8 T 20-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APRE_RS03335 2b2fc73bc59ef5a906b92157c9cbf607 185 Gene3D G3DSA:1.20.144.10 7 169 4.1E-33 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS03335 2b2fc73bc59ef5a906b92157c9cbf607 185 SMART SM00014 53 165 1.3E-20 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS03335 2b2fc73bc59ef5a906b92157c9cbf607 185 PANTHER PTHR14969 8 171 1.4E-30 T 20-04-2016 APRE_RS03335 2b2fc73bc59ef5a906b92157c9cbf607 185 Pfam PF01569 PAP2 superfamily 58 169 2.9E-25 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS03335 2b2fc73bc59ef5a906b92157c9cbf607 185 SUPERFAMILY SSF48317 4 169 4.84E-37 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS01325 13381db009abd1a6ec96d929dde50152 423 Gene3D G3DSA:3.40.190.10 284 340 1.5E-4 T 20-04-2016 APRE_RS01325 13381db009abd1a6ec96d929dde50152 423 PANTHER PTHR30061 1 384 2.3E-63 T 20-04-2016 APRE_RS01325 13381db009abd1a6ec96d929dde50152 423 Pfam PF01547 Bacterial extracellular solute-binding protein 48 339 2.5E-42 T 20-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 APRE_RS01325 13381db009abd1a6ec96d929dde50152 423 SUPERFAMILY SSF53850 23 420 4.0E-73 T 20-04-2016 APRE_RS01325 13381db009abd1a6ec96d929dde50152 423 PANTHER PTHR30061:SF1 1 384 2.3E-63 T 20-04-2016 APRE_RS01325 13381db009abd1a6ec96d929dde50152 423 Gene3D G3DSA:3.40.190.10 33 208 4.4E-39 T 20-04-2016 APRE_RS00995 2d01d81bd329a01b51812929a2381f09 367 PIRSF PIRSF026508 10 367 2.7E-84 T 20-04-2016 IPR008863 Toxic anion resistance APRE_RS00995 2d01d81bd329a01b51812929a2381f09 367 PANTHER PTHR38432:SF1 12 365 6.3E-68 T 20-04-2016 APRE_RS00995 2d01d81bd329a01b51812929a2381f09 367 PANTHER PTHR38432 12 365 6.3E-68 T 20-04-2016 APRE_RS00995 2d01d81bd329a01b51812929a2381f09 367 Pfam PF05816 Toxic anion resistance protein (TelA) 42 366 3.1E-114 T 20-04-2016 IPR008863 Toxic anion resistance APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Pfam PF00009 Elongation factor Tu GTP binding domain 217 373 2.1E-33 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 SUPERFAMILY SSF52540 197 385 1.02E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 710 16.523 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 PANTHER PTHR23115:SF184 194 540 1.9E-188 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 PANTHER PTHR23115:SF184 565 711 1.9E-188 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 PANTHER PTHR23115 194 540 1.9E-188 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 PANTHER PTHR23115 565 711 1.9E-188 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 371 2.9E-33 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 4 53 4.5E-10 T 20-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 133 183 1.9E-8 T 20-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Gene3D G3DSA:3.40.50.10050 512 591 1.3E-22 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Gene3D G3DSA:2.40.30.10 614 710 5.0E-33 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 SUPERFAMILY SSF52156 493 619 1.57E-36 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 SUPERFAMILY SSF50447 384 467 2.7E-22 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 SUPERFAMILY SSF50447 614 710 1.63E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Gene3D G3DSA:2.40.30.10 383 476 2.5E-20 T 20-04-2016 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Pfam PF11987 Translation-initiation factor 2 498 602 4.3E-35 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 129 710 4.0E-238 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APRE_RS03195 eef0cda450281b76365ba7a5957e460e 711 Gene3D G3DSA:3.40.50.300 200 372 9.0E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04550 0cde5955671c31c7f0a2a49bc41f88e2 118 Pfam PF06949 Protein of unknown function (DUF1292) 29 91 6.0E-9 T 20-04-2016 IPR009711 Uncharacterised protein family UPF0473 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 SUPERFAMILY SSF101821 114 244 2.65E-35 T 20-04-2016 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PANTHER PTHR28570:SF2 1 468 3.1E-197 T 20-04-2016 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 38 465 3.5E-92 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 Gene3D G3DSA:2.30.250.10 113 248 2.5E-49 T 20-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 Gene3D G3DSA:3.40.630.10 30 112 2.7E-86 T 20-04-2016 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 Gene3D G3DSA:3.40.630.10 254 467 2.7E-86 T 20-04-2016 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 SUPERFAMILY SSF53187 14 113 1.64E-99 T 20-04-2016 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 SUPERFAMILY SSF53187 245 467 1.64E-99 T 20-04-2016 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 432 447 6.4E-31 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 102 118 6.4E-31 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 171 188 6.4E-31 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 135 155 6.4E-31 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 294 312 6.4E-31 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 338 354 6.4E-31 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02160 b932651c929a78fe929c9f18a36a7953 468 PANTHER PTHR28570 1 468 3.1E-197 T 20-04-2016 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 Gene3D G3DSA:3.40.50.2020 12 179 3.7E-73 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS04950 add751608720218b0b6c6332a349d48a 329 Gene3D G3DSA:3.40.50.2020 180 300 3.8E-49 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS04950 add751608720218b0b6c6332a349d48a 329 SUPERFAMILY SSF53271 81 316 3.95E-61 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS04950 add751608720218b0b6c6332a349d48a 329 PANTHER PTHR10210 5 325 1.8E-176 T 20-04-2016 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 SMART SM01400 16 132 9.5E-80 T 20-04-2016 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 17 325 8.6E-122 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 PANTHER PTHR10210:SF41 5 325 1.8E-176 T 20-04-2016 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 16 326 48.351 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 140 155 - T 20-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 Pfam PF14572 Phosphoribosyl synthetase-associated domain 217 325 4.6E-27 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APRE_RS04950 add751608720218b0b6c6332a349d48a 329 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 16 132 3.6E-50 T 20-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APRE_RS06710 b29a5188055da3b3c78da49da6bfa758 191 PANTHER PTHR30335:SF0 2 191 1.1E-92 T 20-04-2016 APRE_RS06710 b29a5188055da3b3c78da49da6bfa758 191 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 24.324 T 20-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APRE_RS06710 b29a5188055da3b3c78da49da6bfa758 191 PIRSF PIRSF006102 1 191 1.3E-57 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APRE_RS06710 b29a5188055da3b3c78da49da6bfa758 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.8E-59 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APRE_RS06710 b29a5188055da3b3c78da49da6bfa758 191 PANTHER PTHR30335 2 191 1.1E-92 T 20-04-2016 APRE_RS06710 b29a5188055da3b3c78da49da6bfa758 191 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 1.1E-76 T 20-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 Gene3D G3DSA:2.30.22.10 122 178 5.5E-25 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 Gene3D G3DSA:3.90.20.20 28 120 2.9E-26 T 20-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 PRINTS PR00773 GrpE protein signature 157 176 4.6E-26 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 PRINTS PR00773 GrpE protein signature 79 94 4.6E-26 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 PRINTS PR00773 GrpE protein signature 130 145 4.6E-26 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 PRINTS PR00773 GrpE protein signature 51 67 4.6E-26 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 Hamap MF_01151 Protein GrpE [grpE]. 4 178 20.153 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 SUPERFAMILY SSF51064 124 178 4.58E-17 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 SUPERFAMILY SSF58014 30 122 1.14E-23 T 20-04-2016 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 PANTHER PTHR21237 14 178 2.9E-47 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 ProSitePatterns PS01071 grpE protein signature. 133 176 - T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS05945 b9da38db32b66eff29a342bba1eb7d34 178 Pfam PF01025 GrpE 20 178 2.4E-49 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 PANTHER PTHR26402 2 215 5.4E-57 T 20-04-2016 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 SMART SM00862 143 215 3.4E-22 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 Pfam PF00072 Response regulator receiver domain 4 110 2.4E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 215 3.5E-21 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 SMART SM00448 2 110 3.4E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 Gene3D G3DSA:1.10.10.10 121 215 7.3E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 SUPERFAMILY SSF52172 1 172 4.06E-32 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 Gene3D G3DSA:3.40.50.2300 2 118 6.1E-28 T 20-04-2016 APRE_RS03830 f6a503fbbcf521f6957f3b9de406022e 216 PANTHER PTHR26402:SF578 2 215 5.4E-57 T 20-04-2016 APRE_RS08060 cd36be9416c8b239c23fed86a494e32b 97 Gene3D G3DSA:3.30.70.330 2 96 1.0E-35 T 20-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APRE_RS08060 cd36be9416c8b239c23fed86a494e32b 97 PANTHER PTHR11620 4 88 1.5E-33 T 20-04-2016 APRE_RS08060 cd36be9416c8b239c23fed86a494e32b 97 Pfam PF00276 Ribosomal protein L23 6 88 5.0E-34 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APRE_RS08060 cd36be9416c8b239c23fed86a494e32b 97 SUPERFAMILY SSF54189 4 95 4.68E-32 T 20-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08060 cd36be9416c8b239c23fed86a494e32b 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 96 22.816 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APRE_RS08090 12a8f4b1ce8bccf8799da9dad6fa30be 434 PANTHER PTHR33451 1 427 1.4E-156 T 20-04-2016 APRE_RS08090 12a8f4b1ce8bccf8799da9dad6fa30be 434 PANTHER PTHR33451:SF5 1 427 1.4E-156 T 20-04-2016 APRE_RS08090 12a8f4b1ce8bccf8799da9dad6fa30be 434 Pfam PF03553 Na+/H+ antiporter family 240 424 5.2E-8 T 20-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APRE_RS08090 12a8f4b1ce8bccf8799da9dad6fa30be 434 Pfam PF03553 Na+/H+ antiporter family 48 218 3.1E-15 T 20-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APRE_RS02390 0219154eebaa107cd1ea6d158a2f8c9f 129 SUPERFAMILY SSF50729 15 129 7.38E-36 T 20-04-2016 IPR011993 PH domain-like APRE_RS02390 0219154eebaa107cd1ea6d158a2f8c9f 129 PANTHER PTHR35796 1 129 1.6E-26 T 20-04-2016 APRE_RS02390 0219154eebaa107cd1ea6d158a2f8c9f 129 Pfam PF08000 Bacterial PH domain 10 127 3.9E-37 T 20-04-2016 IPR012544 Bacterial Pleckstrin homology domain APRE_RS02390 0219154eebaa107cd1ea6d158a2f8c9f 129 Gene3D G3DSA:2.30.29.50 14 105 9.6E-32 T 20-04-2016 IPR012544 Bacterial Pleckstrin homology domain APRE_RS02470 c76b4a39371792a114e8a446d2c97b37 341 PANTHER PTHR30465 37 341 1.2E-100 T 20-04-2016 APRE_RS02470 c76b4a39371792a114e8a446d2c97b37 341 Gene3D G3DSA:1.10.3720.10 113 337 1.8E-20 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02470 c76b4a39371792a114e8a446d2c97b37 341 SUPERFAMILY SSF161098 114 340 4.58E-21 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02470 c76b4a39371792a114e8a446d2c97b37 341 PANTHER PTHR30465:SF75 37 341 1.2E-100 T 20-04-2016 APRE_RS02470 c76b4a39371792a114e8a446d2c97b37 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 42 86 4.9E-13 T 20-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APRE_RS02470 c76b4a39371792a114e8a446d2c97b37 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 341 1.1E-25 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 SUPERFAMILY SSF52374 10 105 3.58E-16 T 20-04-2016 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 SUPERFAMILY SSF52374 177 228 3.58E-16 T 20-04-2016 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 Hamap MF_01539 UPF0348 protein . 2 387 29.94 T 20-04-2016 IPR008513 Uncharacterised protein family UPF0348 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 PANTHER PTHR37825 2 393 4.2E-70 T 20-04-2016 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 Pfam PF05636 HIGH Nucleotidyl Transferase 1 377 1.8E-103 T 20-04-2016 IPR008513 Uncharacterised protein family UPF0348 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 PANTHER PTHR37825:SF1 2 393 4.2E-70 T 20-04-2016 APRE_RS05285 be196838a9a430b1792cb09cbf93de43 394 Gene3D G3DSA:3.40.50.620 1 231 1.8E-63 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS04910 7923cf291397a169b2f78ec8842628ac 62 Pfam PF01192 RNA polymerase Rpb6 9 58 9.9E-11 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS04910 7923cf291397a169b2f78ec8842628ac 62 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 12.13 T 20-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS04910 7923cf291397a169b2f78ec8842628ac 62 SMART SM01409 8 60 1.5E-9 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS04910 7923cf291397a169b2f78ec8842628ac 62 SUPERFAMILY SSF63562 1 60 3.4E-17 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS04910 7923cf291397a169b2f78ec8842628ac 62 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-8 T 20-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS04910 7923cf291397a169b2f78ec8842628ac 62 Gene3D G3DSA:3.90.940.10 1 59 3.4E-13 T 20-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS04005 38e102d033c98f8b662d2a7d697c0c25 190 Gene3D G3DSA:3.40.50.1240 1 188 2.8E-41 T 20-04-2016 IPR029033 Histidine phosphatase superfamily APRE_RS04005 38e102d033c98f8b662d2a7d697c0c25 190 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 20-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APRE_RS04005 38e102d033c98f8b662d2a7d697c0c25 190 SMART SM00855 2 151 8.0E-9 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APRE_RS04005 38e102d033c98f8b662d2a7d697c0c25 190 SUPERFAMILY SSF53254 2 188 1.05E-40 T 20-04-2016 IPR029033 Histidine phosphatase superfamily APRE_RS04005 38e102d033c98f8b662d2a7d697c0c25 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 188 1.3E-35 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APRE_RS04005 38e102d033c98f8b662d2a7d697c0c25 190 PANTHER PTHR23029 1 188 6.6E-31 T 20-04-2016 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 Pfam PF00764 Arginosuccinate synthase 16 403 1.2E-135 T 20-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 SUPERFAMILY SSF52402 13 175 1.35E-40 T 20-04-2016 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 SUPERFAMILY SSF69864 182 408 1.83E-78 T 20-04-2016 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 PANTHER PTHR11587 1 410 4.2E-181 T 20-04-2016 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 126 137 - T 20-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 Hamap MF_00005 Argininosuccinate synthase [argG]. 12 408 46.802 T 20-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 PANTHER PTHR11587:SF2 1 410 4.2E-181 T 20-04-2016 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 Gene3D G3DSA:3.90.1260.10 184 409 4.8E-80 T 20-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 18 26 - T 20-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 Gene3D G3DSA:3.40.50.620 13 180 3.7E-52 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS02575 91caf6b2e46483c9cfe947543d86826a 410 TIGRFAM TIGR00032 argG: argininosuccinate synthase 14 407 3.5E-133 T 20-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 Gene3D G3DSA:3.40.190.10 217 326 4.7E-35 T 20-04-2016 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 Gene3D G3DSA:3.40.190.10 171 209 1.7E-4 T 20-04-2016 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 Pfam PF12849 PBP superfamily domain 69 191 1.7E-10 T 20-04-2016 IPR024370 PBP domain APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 Pfam PF12849 PBP superfamily domain 212 321 2.4E-22 T 20-04-2016 IPR024370 PBP domain APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 SUPERFAMILY SSF53850 213 324 3.72E-31 T 20-04-2016 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 SUPERFAMILY SSF53850 69 206 4.89E-31 T 20-04-2016 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 Gene3D G3DSA:3.40.190.10 69 165 2.1E-25 T 20-04-2016 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 PANTHER PTHR30570:SF1 215 326 6.2E-29 T 20-04-2016 APRE_RS07085 c6f863faa1cec14d4cb47e6d24909870 327 PANTHER PTHR30570 215 326 6.2E-29 T 20-04-2016 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 PANTHER PTHR32125 1 158 6.0E-47 T 20-04-2016 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 20-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 4.1E-62 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 Pfam PF02542 YgbB family 1 155 2.5E-61 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 Gene3D G3DSA:3.30.1330.50 1 156 1.3E-65 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 34.804 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00900 8b29199e8d4c6f90bddddaff788915d8 158 SUPERFAMILY SSF69765 1 156 4.58E-61 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS04930 2efb36a0482dd99af0cf654c5fe5ebc8 308 SUPERFAMILY SSF109998 37 216 6.67E-13 T 20-04-2016 IPR027304 Trigger factor/SurA domain APRE_RS04930 2efb36a0482dd99af0cf654c5fe5ebc8 308 Pfam PF13623 SurA N-terminal domain 12 115 6.6E-10 T 20-04-2016 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 PANTHER PTHR11019 1 323 1.2E-166 T 20-04-2016 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 PANTHER PTHR11019:SF103 1 323 1.2E-166 T 20-04-2016 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 SMART SM00342 235 315 6.0E-19 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 Gene3D G3DSA:1.10.10.60 269 316 1.2E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 Gene3D G3DSA:1.10.10.60 212 268 1.8E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 SUPERFAMILY SSF46689 269 316 8.06E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS03665 cbd1ea07df33e81a0c6c59f6a6b6764c 330 Pfam PF12833 Helix-turn-helix domain 241 316 1.4E-19 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 343 1.9E-78 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 SUPERFAMILY SSF52374 4 343 1.04E-81 T 20-04-2016 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 Gene3D G3DSA:1.10.240.10 217 330 8.5E-39 T 20-04-2016 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 1.0E-24 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.0E-24 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.0E-24 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 1.0E-24 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 PANTHER PTHR10055:SF6 2 347 1.2E-168 T 20-04-2016 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 344 34.623 T 20-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 Gene3D G3DSA:3.40.50.620 4 216 7.0E-79 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 PANTHER PTHR10055 2 347 1.2E-168 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APRE_RS06335 b421bda5a5e30abd967b8e525a3255d9 360 Pfam PF00579 tRNA synthetases class I (W and Y) 5 293 2.8E-57 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 PANTHER PTHR10520 4 328 3.9E-169 T 20-04-2016 APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 73 162 3.0E-15 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 329 2.0E-126 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 333 1.9E-27 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 Gene3D G3DSA:3.30.1330.10 19 168 3.5E-59 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 339 43.634 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 SUPERFAMILY SSF55326 4 168 5.41E-49 T 20-04-2016 APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 Gene3D G3DSA:3.90.650.10 170 334 2.2E-54 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS05630 4216bbb6da68b601ae3e26b19c3486b5 339 SUPERFAMILY SSF56042 169 333 6.49E-49 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Pfam PF00012 Hsp70 protein 84 575 2.4E-212 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Pfam PF00012 Hsp70 protein 4 83 1.0E-30 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PANTHER PTHR19375 2 605 0.0 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 SUPERFAMILY SSF53067 165 355 2.47E-63 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 2.7E-277 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 SUPERFAMILY SSF100934 507 579 3.45E-5 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:3.30.420.40 3 38 7.0E-60 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:3.30.420.40 102 167 7.0E-60 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PANTHER PTHR19375:SF173 2 605 0.0 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 307 323 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 361 380 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 442 458 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 175 185 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 338 358 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 115 135 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:1.20.1270.10 506 574 1.3E-19 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 SUPERFAMILY SSF100920 357 513 9.42E-62 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:3.30.420.40 168 202 5.3E-34 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:3.30.420.40 292 334 5.3E-34 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:3.90.640.10 203 287 7.6E-29 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 310 324 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 169 182 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 SUPERFAMILY SSF53067 2 160 2.37E-60 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:3.30.30.30 39 101 3.4E-17 T 20-04-2016 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 600 36.285 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APRE_RS05940 ac03eb8ff9cf26f1bf6e770d05a522cc 605 Gene3D G3DSA:2.60.34.10 363 505 5.1E-71 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APRE_RS03565 d23e2d6a8af059e513e13d725d5dbcb2 197 Gene3D G3DSA:1.10.357.10 7 188 1.8E-23 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APRE_RS03565 d23e2d6a8af059e513e13d725d5dbcb2 197 SUPERFAMILY SSF46689 10 65 9.23E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS03565 d23e2d6a8af059e513e13d725d5dbcb2 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.0E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS03565 d23e2d6a8af059e513e13d725d5dbcb2 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.0E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS03565 d23e2d6a8af059e513e13d725d5dbcb2 197 PANTHER PTHR30055 10 188 3.2E-14 T 20-04-2016 APRE_RS03565 d23e2d6a8af059e513e13d725d5dbcb2 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 4.1E-12 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 20-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.0E-23 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.0E-23 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.0E-23 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 Gene3D G3DSA:3.30.860.10 1 91 3.9E-42 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 SUPERFAMILY SSF54570 3 85 6.41E-36 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 PIRSF PIRSF002144 1 95 7.2E-33 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 PANTHER PTHR11880 1 85 1.8E-52 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.418 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 Pfam PF00203 Ribosomal protein S19 3 83 6.3E-37 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APRE_RS08050 3ed7a64de589b9b57c1a701822c85d3d 95 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.5E-46 T 20-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 PANTHER PTHR23309 75 317 9.6E-55 T 20-04-2016 APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 PANTHER PTHR23309 1 41 9.6E-55 T 20-04-2016 APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 Gene3D G3DSA:3.40.50.720 1 219 6.0E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 218 316 3.6E-14 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 213 4.4E-38 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 SUPERFAMILY SSF51735 1 64 5.45E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 SUPERFAMILY SSF51735 94 215 5.45E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 SUPERFAMILY SSF48179 217 316 1.87E-17 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS05955 c896f91eaa308e511cd4302ac0f09c89 317 Gene3D G3DSA:1.10.1040.10 220 317 1.3E-18 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PRINTS PR00067 Catalase signature 347 373 6.8E-60 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PRINTS PR00067 Catalase signature 110 128 6.8E-60 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PRINTS PR00067 Catalase signature 150 168 6.8E-60 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PRINTS PR00067 Catalase signature 131 148 6.8E-60 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PRINTS PR00067 Catalase signature 47 70 6.8E-60 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PRINTS PR00067 Catalase signature 315 342 6.8E-60 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PANTHER PTHR11465 12 506 2.0E-251 T 20-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 SMART SM01060 34 420 2.0E-250 T 20-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 Pfam PF00199 Catalase 36 416 1.5E-175 T 20-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 PIRSF PIRSF038928 22 509 5.8E-201 T 20-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 Gene3D G3DSA:2.40.180.10 24 384 1.3E-162 T 20-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 SUPERFAMILY SSF56634 28 523 1.7E-188 T 20-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS02875 2afd172ffd7d158cb0523d1695cbdbed 574 Pfam PF06628 Catalase-related immune-responsive 443 504 6.6E-19 T 20-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APRE_RS01435 0f89d016f5276627c14e1e0a80ced90b 267 SUPERFAMILY SSF53335 48 234 4.76E-28 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01435 0f89d016f5276627c14e1e0a80ced90b 267 Pfam PF08241 Methyltransferase domain 56 154 2.4E-13 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APRE_RS01435 0f89d016f5276627c14e1e0a80ced90b 267 Gene3D G3DSA:3.40.50.150 41 159 4.8E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01435 0f89d016f5276627c14e1e0a80ced90b 267 Gene3D G3DSA:3.40.50.150 193 222 4.8E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01435 0f89d016f5276627c14e1e0a80ced90b 267 PANTHER PTHR10108 44 163 3.6E-16 T 20-04-2016 APRE_RS01435 0f89d016f5276627c14e1e0a80ced90b 267 PANTHER PTHR10108 180 216 3.6E-16 T 20-04-2016 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 SMART SM00382 205 344 1.0E-23 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 Pfam PF06480 FtsH Extracellular 12 96 1.4E-9 T 20-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 341 1.7E-45 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 PANTHER PTHR23076 11 641 6.8E-261 T 20-04-2016 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 Pfam PF01434 Peptidase family M41 403 609 1.1E-63 T 20-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 9 625 34.118 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 Gene3D G3DSA:3.40.50.300 168 340 4.6E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 SUPERFAMILY SSF140990 423 614 3.01E-62 T 20-04-2016 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 ProSitePatterns PS00674 AAA-protein family signature. 312 330 - T 20-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 SUPERFAMILY SSF52540 170 436 9.85E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 119 610 3.3E-203 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APRE_RS08765 61a1027fe319153ab69287932c7a9467 662 Gene3D G3DSA:1.10.8.60 343 416 2.8E-25 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 Gene3D G3DSA:3.30.870.10 317 501 2.4E-61 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 Pfam PF13090 Polyphosphate kinase C-terminal domain 332 676 1.5E-134 T 20-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 SUPERFAMILY SSF56024 502 680 4.49E-59 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 Pfam PF13089 Polyphosphate kinase N-terminal domain 8 112 8.9E-33 T 20-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 SUPERFAMILY SSF143724 111 302 1.94E-41 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 8 676 1.0E-218 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 PANTHER PTHR30218:SF0 9 702 6.9E-229 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 Gene3D G3DSA:3.30.1840.10 109 295 1.4E-44 T 20-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 PANTHER PTHR30218 9 702 6.9E-229 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 SUPERFAMILY SSF56024 317 491 5.1E-46 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 Gene3D G3DSA:3.30.870.10 502 683 2.5E-60 T 20-04-2016 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 Pfam PF02503 Polyphosphate kinase middle domain 126 321 4.0E-48 T 20-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 SUPERFAMILY SSF140356 6 109 5.23E-32 T 20-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APRE_RS02615 2a6061209c3e0daf363cffa4a16c4258 728 PIRSF PIRSF015589 1 695 3.5E-216 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APRE_RS08745 7deb0bd6f12812c94ddbc484f588c791 236 PANTHER PTHR24220 3 231 2.6E-61 T 20-04-2016 APRE_RS08745 7deb0bd6f12812c94ddbc484f588c791 236 Pfam PF00005 ABC transporter 17 148 1.5E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS08745 7deb0bd6f12812c94ddbc484f588c791 236 SMART SM00382 25 228 8.4E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08745 7deb0bd6f12812c94ddbc484f588c791 236 Gene3D G3DSA:3.40.50.300 1 212 2.4E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08745 7deb0bd6f12812c94ddbc484f588c791 236 SUPERFAMILY SSF52540 2 211 5.67E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08820 a7852112cdb223a73a55d08ceb393fd5 273 SUPERFAMILY SSF52540 1 272 5.33E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08820 a7852112cdb223a73a55d08ceb393fd5 273 Pfam PF13614 AAA domain 2 199 4.4E-56 T 20-04-2016 IPR025669 AAA domain APRE_RS08820 a7852112cdb223a73a55d08ceb393fd5 273 PANTHER PTHR13696:SF52 2 271 1.0E-77 T 20-04-2016 APRE_RS08820 a7852112cdb223a73a55d08ceb393fd5 273 PANTHER PTHR13696 2 271 1.0E-77 T 20-04-2016 APRE_RS08820 a7852112cdb223a73a55d08ceb393fd5 273 Gene3D G3DSA:3.40.50.300 1 272 3.0E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 SUPERFAMILY SSF46894 130 194 3.74E-18 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 PANTHER PTHR26402 1 194 6.9E-42 T 20-04-2016 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 Gene3D G3DSA:1.10.10.10 138 193 1.2E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 Gene3D G3DSA:3.40.50.2300 1 137 8.2E-28 T 20-04-2016 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 Pfam PF00072 Response regulator receiver domain 3 115 5.9E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 188 1.1E-17 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 SUPERFAMILY SSF52172 1 125 4.41E-22 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 PANTHER PTHR26402:SF151 1 194 6.9E-42 T 20-04-2016 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 164 5.6E-12 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 148 5.6E-12 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 176 5.6E-12 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 SMART SM00448 1 115 2.3E-18 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS07795 e4d75cc92622934577b26767320c15e0 198 SMART SM00421 131 188 8.7E-18 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 1.4E-26 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 Gene3D G3DSA:3.30.930.10 111 421 2.0E-106 T 20-04-2016 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PIRSF PIRSF001529 1 427 1.4E-133 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 Gene3D G3DSA:1.10.287.40 1 109 2.6E-26 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 SUPERFAMILY SSF46589 1 117 2.82E-25 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PANTHER PTHR11778 1 428 3.6E-156 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 400 1.4E-28 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 SUPERFAMILY SSF55681 121 419 3.83E-74 T 20-04-2016 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 418 8.2E-123 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PRINTS PR00981 Seryl-tRNA synthetase signature 267 279 3.1E-20 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PRINTS PR00981 Seryl-tRNA synthetase signature 336 352 3.1E-20 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PRINTS PR00981 Seryl-tRNA synthetase signature 354 370 3.1E-20 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PRINTS PR00981 Seryl-tRNA synthetase signature 319 332 3.1E-20 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS03055 36a42fb7cd2dbfcf985c01655c84fe4b 429 PRINTS PR00981 Seryl-tRNA synthetase signature 279 292 3.1E-20 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APRE_RS04060 0d5480505105ccecd98a7e28c242e6c2 191 SUPERFAMILY SSF53271 2 150 8.52E-39 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS04060 0d5480505105ccecd98a7e28c242e6c2 191 Gene3D G3DSA:3.40.50.2020 3 176 5.8E-42 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS04060 0d5480505105ccecd98a7e28c242e6c2 191 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 5 188 5.9E-69 T 20-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04060 0d5480505105ccecd98a7e28c242e6c2 191 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 191 24.212 T 20-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04060 0d5480505105ccecd98a7e28c242e6c2 191 PANTHER PTHR19278 5 176 1.3E-38 T 20-04-2016 APRE_RS04060 0d5480505105ccecd98a7e28c242e6c2 191 Pfam PF00156 Phosphoribosyl transferase domain 39 170 1.7E-14 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 Gene3D G3DSA:3.90.700.10 398 538 4.7E-38 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 SUPERFAMILY SSF56425 398 546 7.92E-40 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 Pfam PF04205 FMN-binding domain 63 133 3.5E-14 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 159 597 4.0E-150 T 20-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 PANTHER PTHR11632 156 607 1.1E-161 T 20-04-2016 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 SMART SM00900 63 136 7.5E-11 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 550 572 1.64E-6 T 20-04-2016 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 179 1.64E-6 T 20-04-2016 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 SUPERFAMILY SSF51905 151 415 2.71E-67 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 SUPERFAMILY SSF51905 545 607 2.71E-67 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 Gene3D G3DSA:3.50.50.60 149 392 8.1E-109 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 Gene3D G3DSA:3.50.50.60 542 606 8.1E-109 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00705 06e3377d58c7a58b9ce5ac1c73464898 608 Pfam PF00890 FAD binding domain 159 586 6.0E-104 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 PANTHER PTHR14025:SF21 407 1166 0.0 T 20-04-2016 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SMART SM00487 621 811 3.9E-31 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1099 0.0 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Pfam PF03461 TRCF domain 1027 1119 9.2E-24 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Pfam PF00270 DEAD/DEAH box helicase 629 787 9.2E-17 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SUPERFAMILY SSF141259 493 569 2.62E-23 T 20-04-2016 IPR003711 CarD-like/TRCF domain APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Gene3D G3DSA:3.30.2060.10 139 216 7.3E-11 T 20-04-2016 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SUPERFAMILY SSF143517 1014 1160 1.7E-28 T 20-04-2016 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 PANTHER PTHR14025 407 1166 0.0 T 20-04-2016 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SMART SM00490 847 931 8.6E-22 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SMART SM01058 500 597 6.7E-48 T 20-04-2016 IPR003711 CarD-like/TRCF domain APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Pfam PF00271 Helicase conserved C-terminal domain 828 931 1.8E-18 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Gene3D G3DSA:3.40.50.300 822 977 1.1E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 41 1164 27.51 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Gene3D G3DSA:3.40.50.300 608 807 9.6E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SUPERFAMILY SSF52540 15 363 3.05E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 Pfam PF02559 CarD-like/TRCF domain 501 596 1.5E-29 T 20-04-2016 IPR003711 CarD-like/TRCF domain APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SUPERFAMILY SSF52540 545 804 1.92E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SMART SM00982 1026 1126 6.2E-25 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APRE_RS04940 4605f5fd9778a30a25b2888a441503d1 1170 SUPERFAMILY SSF52540 804 1009 1.66E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 PANTHER PTHR11776 1 189 2.2E-73 T 20-04-2016 APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 Pfam PF00156 Phosphoribosyl transferase domain 32 157 6.1E-11 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 PANTHER PTHR11776:SF1 1 189 2.2E-73 T 20-04-2016 APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 192 8.6E-74 T 20-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 SUPERFAMILY SSF53271 1 190 2.19E-45 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 190 37.604 T 20-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 APRE_RS02050 9901ed228f3ac2ed4471fd153896b7bb 192 Gene3D G3DSA:3.40.50.2020 1 191 2.7E-62 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 PANTHER PTHR10000 1 192 1.0E-11 T 20-04-2016 APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 Gene3D G3DSA:3.40.50.1000 146 205 7.2E-27 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 Gene3D G3DSA:3.40.50.1000 1 81 7.2E-27 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 198 1.5E-17 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 SUPERFAMILY SSF56784 2 200 1.86E-28 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 97 9.1E-11 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02310 ae27dedad2cb33a675f0694f713c23ac 230 Pfam PF08282 haloacid dehalogenase-like hydrolase 134 200 1.3E-9 T 20-04-2016 IPR023214 HAD-like domain APRE_RS06105 965e34e955f18cb613416aca6f52ba8d 155 PANTHER PTHR30455:SF2 2 155 5.3E-65 T 20-04-2016 APRE_RS06105 965e34e955f18cb613416aca6f52ba8d 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 78.452 T 20-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APRE_RS06105 965e34e955f18cb613416aca6f52ba8d 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.4E-56 T 20-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APRE_RS06105 965e34e955f18cb613416aca6f52ba8d 155 Pfam PF03477 ATP cone domain 49 136 1.8E-17 T 20-04-2016 IPR005144 ATP-cone domain APRE_RS06105 965e34e955f18cb613416aca6f52ba8d 155 Gene3D G3DSA:3.90.1670.10 1 51 7.2E-4 T 20-04-2016 IPR024064 FdhE-like APRE_RS06105 965e34e955f18cb613416aca6f52ba8d 155 PANTHER PTHR30455 2 155 5.3E-65 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 5.7E-14 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 5.7E-14 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 5.7E-14 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.7E-14 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 Gene3D G3DSA:3.50.50.60 103 303 8.8E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.8E-19 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.8E-19 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 2.8E-19 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 2.8E-19 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.8E-19 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PANTHER PTHR22912:SF1 3 375 1.7E-95 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 PANTHER PTHR22912 3 375 1.7E-95 T 20-04-2016 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 Gene3D G3DSA:3.50.50.60 1 102 1.4E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 SUPERFAMILY SSF51905 1 303 9.21E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07690 e95562ea732d65b108e65c9927e98f5d 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 294 1.2E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02080 d9dd2d3d9faf473a786e04373218619f 98 PANTHER PTHR33777 1 98 5.1E-34 T 20-04-2016 APRE_RS02080 d9dd2d3d9faf473a786e04373218619f 98 SUPERFAMILY SSF89957 1 98 9.94E-33 T 20-04-2016 IPR029756 MTH1187/YkoF-like APRE_RS02080 d9dd2d3d9faf473a786e04373218619f 98 PANTHER PTHR33777:SF2 1 98 5.1E-34 T 20-04-2016 APRE_RS02080 d9dd2d3d9faf473a786e04373218619f 98 Gene3D G3DSA:3.30.70.930 1 98 2.9E-36 T 20-04-2016 IPR029756 MTH1187/YkoF-like APRE_RS02080 d9dd2d3d9faf473a786e04373218619f 98 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 3 98 3.9E-35 T 20-04-2016 IPR002767 Thiamine-binding protein APRE_RS02080 d9dd2d3d9faf473a786e04373218619f 98 Pfam PF01910 Thiamine-binding protein 4 95 1.0E-35 T 20-04-2016 IPR002767 Thiamine-binding protein APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 568 6.2E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 285 299 6.2E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 6.2E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 6.2E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 6.2E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 589 6.2E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 159 741 1.6E-195 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 719 5.6E-99 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 142 742 3.2E-181 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 ProSitePatterns PS01047 Heavy-metal-associated domain. 775 804 - T 20-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 35 - T 20-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF81665 336 428 1.23E-8 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF81665 203 239 1.23E-8 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF81653 238 335 1.44E-28 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PANTHER PTHR24093:SF50 1 755 1.1E-240 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Pfam PF00702 haloacid dehalogenase-like hydrolase 431 646 2.8E-43 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Gene3D G3DSA:3.30.70.100 2 70 1.3E-21 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF55008 765 835 1.09E-16 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Gene3D G3DSA:3.40.50.1000 406 450 7.2E-56 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Gene3D G3DSA:3.40.50.1000 560 700 7.2E-56 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Pfam PF00403 Heavy-metal-associated domain 773 832 2.0E-15 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Pfam PF00403 Heavy-metal-associated domain 4 63 1.4E-13 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Gene3D G3DSA:3.40.1110.10 451 559 4.3E-22 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF56784 434 453 2.32E-59 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF56784 490 739 2.32E-59 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Gene3D G3DSA:3.30.70.100 771 834 2.0E-19 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 773 832 3.0E-13 T 20-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 2 64 1.5E-10 T 20-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Pfam PF00122 E1-E2 ATPase 207 426 7.2E-70 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 Gene3D G3DSA:2.70.150.10 181 335 4.6E-36 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 225 243 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 124 142 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 45 65 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 144 163 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 609 626 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 418 433 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PRINTS PR00943 Copper-transporting ATPase signature 358 372 7.0E-23 T 20-04-2016 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 SUPERFAMILY SSF55008 1 71 2.75E-18 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 437 443 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APRE_RS05040 d6b07abc87510b1774589952b8fbaea1 839 PANTHER PTHR24093 1 755 1.1E-240 T 20-04-2016 APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 306 2.5E-88 T 20-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 PANTHER PTHR10584:SF178 1 282 5.0E-79 T 20-04-2016 APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 20-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 SUPERFAMILY SSF53613 1 286 3.27E-60 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 PANTHER PTHR10584 1 282 5.0E-79 T 20-04-2016 APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 Gene3D G3DSA:3.40.1190.20 32 307 1.3E-75 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 Pfam PF00294 pfkB family carbohydrate kinase 16 286 2.2E-45 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APRE_RS00410 05e4eaa1d3061b4e026c50365b10b63c 308 PIRSF PIRSF000535 1 308 3.3E-97 T 20-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 154 353 2.0E-64 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 PANTHER PTHR30387:SF2 1 356 1.7E-110 T 20-04-2016 APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 353 1.4E-139 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 PIRSF PIRSF016049 1 356 1.1E-109 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 SUPERFAMILY SSF51658 1 351 5.25E-80 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 Gene3D G3DSA:3.20.20.150 1 354 3.3E-136 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 356 151.083 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APRE_RS08205 9366a49ef272e5cf7136c8df4f77af39 356 PANTHER PTHR30387 1 356 1.7E-110 T 20-04-2016 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 PANTHER PTHR33284 1 208 4.3E-41 T 20-04-2016 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 184 4.2E-16 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 Gene3D G3DSA:2.170.120.20 98 191 8.4E-17 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 95 9.0E-13 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 SUPERFAMILY SSF50715 10 184 1.19E-45 T 20-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 181 1.4E-41 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 Pfam PF01386 Ribosomal L25p family 6 92 4.3E-25 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 23.558 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APRE_RS05750 a03bfd912eb29cd3ee1a90652eddd489 217 Gene3D G3DSA:2.40.240.10 4 95 2.5E-29 T 20-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APRE_RS08105 712f9549bd0c5465fc333cfdc49419ff 378 PANTHER PTHR23501 29 332 1.2E-14 T 20-04-2016 APRE_RS08105 712f9549bd0c5465fc333cfdc49419ff 378 Gene3D G3DSA:1.20.1250.20 11 186 1.0E-18 T 20-04-2016 APRE_RS08105 712f9549bd0c5465fc333cfdc49419ff 378 Gene3D G3DSA:1.20.1250.20 187 376 3.0E-10 T 20-04-2016 APRE_RS08105 712f9549bd0c5465fc333cfdc49419ff 378 SUPERFAMILY SSF103473 9 376 1.7E-38 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS08105 712f9549bd0c5465fc333cfdc49419ff 378 Pfam PF07690 Major Facilitator Superfamily 12 337 2.2E-27 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 PANTHER PTHR26402:SF614 1 218 2.4E-82 T 20-04-2016 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 Gene3D G3DSA:3.40.50.2300 2 120 3.6E-37 T 20-04-2016 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 PANTHER PTHR26402 1 218 2.4E-82 T 20-04-2016 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 SMART SM00448 1 110 3.2E-34 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 Pfam PF00072 Response regulator receiver domain 2 110 6.9E-27 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 SMART SM00862 143 216 2.9E-24 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 SUPERFAMILY SSF52172 2 127 3.84E-37 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 Gene3D G3DSA:1.10.10.10 121 217 1.3E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.2E-23 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS07060 387a4e2f5eb44ec924be8c68a5e8f63d 219 SUPERFAMILY SSF46894 116 216 6.8E-28 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APRE_RS00365 b69b646fe27fb2f51f349aae9038a711 150 Gene3D G3DSA:3.40.1400.10 1 149 2.5E-36 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00365 b69b646fe27fb2f51f349aae9038a711 150 PIRSF PIRSF005384 1 150 4.1E-33 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00365 b69b646fe27fb2f51f349aae9038a711 150 PANTHER PTHR30345:SF5 1 150 2.6E-40 T 20-04-2016 APRE_RS00365 b69b646fe27fb2f51f349aae9038a711 150 PANTHER PTHR30345 1 150 2.6E-40 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00365 b69b646fe27fb2f51f349aae9038a711 150 SUPERFAMILY SSF89623 1 149 6.02E-34 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00365 b69b646fe27fb2f51f349aae9038a711 150 Pfam PF02502 Ribose/Galactose Isomerase 3 146 7.2E-36 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 SMART SM00433 35 626 0.0 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 SUPERFAMILY SSF55874 6 217 3.41E-71 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00025 78f57c01303533f46d8624be90977b70 633 SUPERFAMILY SSF54211 220 390 4.17E-60 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Pfam PF01751 Toprim domain 418 529 9.1E-19 T 20-04-2016 IPR006171 Toprim domain APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 311 327 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 359 373 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 6 16 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 373 393 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 602 618 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 469 478 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR01159 DNA gyrase subunit B signature 219 241 1.2E-64 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 ProSitePatterns PS00177 DNA topoisomerase II signature. 421 429 - T 20-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 SUPERFAMILY SSF56719 393 625 2.07E-86 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 633 4.8E-292 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 561 622 1.4E-26 T 20-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Gene3D G3DSA:3.40.50.670 403 615 5.7E-91 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Gene3D G3DSA:3.30.230.10 219 391 4.8E-75 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 485 501 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 267 280 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 419 433 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 523 535 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 503 520 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PRINTS PR00418 DNA topoisomerase II family signature 564 580 1.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.4E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Gene3D G3DSA:3.30.565.10 6 217 2.0E-88 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00025 78f57c01303533f46d8624be90977b70 633 PANTHER PTHR10169 3 633 2.7E-295 T 20-04-2016 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 SMART SM00387 31 175 8.0E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Pfam PF00204 DNA gyrase B 220 389 1.1E-65 T 20-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00025 78f57c01303533f46d8624be90977b70 633 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 633 86.907 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 359 30.184 T 20-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 355 5.4E-82 T 20-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 341 1.2E-33 T 20-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 PANTHER PTHR21015 1 363 1.7E-103 T 20-04-2016 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 SUPERFAMILY SSF53756 1 360 2.9E-91 T 20-04-2016 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 PANTHER PTHR21015:SF22 1 363 1.7E-103 T 20-04-2016 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 Gene3D G3DSA:3.40.50.2000 1 187 1.1E-58 T 20-04-2016 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 1.0E-38 T 20-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06120 6d688310394d714138ef1ff7a1c41b5a 363 Gene3D G3DSA:3.40.50.2000 188 332 6.7E-6 T 20-04-2016 APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 SMART SM00986 27 183 1.9E-20 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 SMART SM00987 27 183 1.9E-20 T 20-04-2016 APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 Gene3D G3DSA:3.40.470.10 2 186 2.8E-33 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 SUPERFAMILY SSF52141 3 189 6.32E-43 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 PANTHER PTHR42160:SF1 1 190 4.2E-72 T 20-04-2016 APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 PANTHER PTHR42160 1 190 4.2E-72 T 20-04-2016 APRE_RS06010 9a348cd2bfa39f958345b08e87a135c7 190 Pfam PF03167 Uracil DNA glycosylase superfamily 29 183 4.6E-21 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 Gene3D G3DSA:1.10.10.10 1 62 4.0E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 PIRSF PIRSF037847 1 166 1.3E-53 T 20-04-2016 IPR026043 Transcription repressor NadR APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 SUPERFAMILY SSF75500 65 165 1.7E-27 T 20-04-2016 IPR004173 3H domain GO:0036094 APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 Gene3D G3DSA:3.30.1340.20 64 166 5.8E-34 T 20-04-2016 IPR004173 3H domain GO:0036094 APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 74 165 1.0E-19 T 20-04-2016 IPR004173 3H domain GO:0036094 APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 Pfam PF02829 3H domain 70 164 6.3E-30 T 20-04-2016 IPR004173 3H domain GO:0036094 APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 SUPERFAMILY SSF46785 1 61 2.18E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 Pfam PF08279 HTH domain 6 58 5.5E-15 T 20-04-2016 IPR013196 Helix-turn-helix, type 11 APRE_RS07855 ac935432c00492c1041c402f99cb0dd8 166 PANTHER PTHR40068 1 166 7.2E-49 T 20-04-2016 APRE_RS03585 76dd60eb038a7a85f7ab556b714c743a 234 SMART SM00382 32 224 3.8E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03585 76dd60eb038a7a85f7ab556b714c743a 234 SUPERFAMILY SSF52540 4 231 1.0E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03585 76dd60eb038a7a85f7ab556b714c743a 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03585 76dd60eb038a7a85f7ab556b714c743a 234 PANTHER PTHR24220 5 229 3.5E-73 T 20-04-2016 APRE_RS03585 76dd60eb038a7a85f7ab556b714c743a 234 Gene3D G3DSA:3.40.50.300 4 231 5.5E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03585 76dd60eb038a7a85f7ab556b714c743a 234 Pfam PF00005 ABC transporter 23 175 2.8E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 387 402 5.8E-31 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 42 53 5.8E-31 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 222 245 5.8E-31 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 5.8E-31 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 514 527 5.8E-31 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 SUPERFAMILY SSF52374 8 199 3.33E-138 T 20-04-2016 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 SUPERFAMILY SSF52374 389 644 3.33E-138 T 20-04-2016 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PANTHER PTHR11946:SF87 1 243 0.0 T 20-04-2016 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PANTHER PTHR11946:SF87 265 930 0.0 T 20-04-2016 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 SUPERFAMILY SSF47323 650 876 8.6E-47 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Gene3D G3DSA:1.10.730.10 635 819 7.3E-45 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 SUPERFAMILY SSF50677 208 381 3.98E-46 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 9 839 2.6E-286 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Gene3D G3DSA:3.90.740.10 206 375 2.4E-56 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 626 5.6E-183 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PANTHER PTHR11946 1 243 0.0 T 20-04-2016 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 PANTHER PTHR11946 265 930 0.0 T 20-04-2016 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Pfam PF08264 Anticodon-binding domain of tRNA 683 830 3.0E-33 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 2 1031 13.444 T 20-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 SUPERFAMILY SSF47323 954 1032 2.35E-5 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Gene3D G3DSA:3.40.50.620 392 632 6.6E-147 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS01560 eb4a53fb2affea61bb83b697aef4e003 1037 Gene3D G3DSA:3.40.50.620 11 195 6.6E-147 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS03675 6e98d663e57372284219535209d92b9f 573 Pfam PF00005 ABC transporter 346 493 3.6E-36 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03675 6e98d663e57372284219535209d92b9f 573 Gene3D G3DSA:3.40.50.300 330 559 4.5E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03675 6e98d663e57372284219535209d92b9f 573 SMART SM00382 355 541 1.3E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03675 6e98d663e57372284219535209d92b9f 573 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03675 6e98d663e57372284219535209d92b9f 573 SUPERFAMILY SSF90123 1 319 1.57E-39 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03675 6e98d663e57372284219535209d92b9f 573 Pfam PF00664 ABC transporter transmembrane region 22 272 4.9E-15 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03675 6e98d663e57372284219535209d92b9f 573 SUPERFAMILY SSF52540 325 563 4.46E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03675 6e98d663e57372284219535209d92b9f 573 PANTHER PTHR24221 22 570 4.1E-135 T 20-04-2016 APRE_RS03675 6e98d663e57372284219535209d92b9f 573 Gene3D G3DSA:1.20.1560.10 6 292 3.9E-30 T 20-04-2016 APRE_RS05025 dd37849e3f78424f90e09cf09f7576f8 218 SUPERFAMILY SSF52317 17 194 1.67E-24 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS05025 dd37849e3f78424f90e09cf09f7576f8 218 PANTHER PTHR21343 1 216 1.7E-75 T 20-04-2016 APRE_RS05025 dd37849e3f78424f90e09cf09f7576f8 218 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 4 201 5.0E-41 T 20-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 APRE_RS05025 dd37849e3f78424f90e09cf09f7576f8 218 Gene3D G3DSA:3.40.50.880 20 215 5.3E-15 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS05025 dd37849e3f78424f90e09cf09f7576f8 218 PANTHER PTHR21343:SF9 1 216 1.7E-75 T 20-04-2016 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 20-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 Pfam PF00571 CBS domain 150 199 7.6E-6 T 20-04-2016 IPR000644 CBS domain APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 Pfam PF00571 CBS domain 94 139 4.0E-8 T 20-04-2016 IPR000644 CBS domain APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 469 3.2E-165 T 20-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 SMART SM00116 95 143 4.5E-8 T 20-04-2016 IPR000644 CBS domain APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 SMART SM00116 156 204 1.1E-5 T 20-04-2016 IPR000644 CBS domain APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 SUPERFAMILY SSF54631 63 201 2.27E-26 T 20-04-2016 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 Gene3D G3DSA:3.20.20.70 5 481 9.1E-196 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 PANTHER PTHR11911 298 482 1.3E-237 T 20-04-2016 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 PANTHER PTHR11911 1 280 1.3E-237 T 20-04-2016 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 SUPERFAMILY SSF51412 3 89 1.09E-126 T 20-04-2016 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 SUPERFAMILY SSF51412 215 473 1.09E-126 T 20-04-2016 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 PANTHER PTHR11911:SF6 298 482 1.3E-237 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 PANTHER PTHR11911:SF6 1 280 1.3E-237 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 482 83.241 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 PIRSF PIRSF000130 1 483 2.2E-207 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 449 6.4E-191 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APRE_RS05640 a3eb2b5f72c72a4ef0200afe092c9eb5 483 SMART SM01240 6 469 0.0 T 20-04-2016 APRE_RS06530 95e86f34653e90a1431d218eb87c486a 196 Gene3D G3DSA:3.90.79.10 12 189 2.5E-29 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS06530 95e86f34653e90a1431d218eb87c486a 196 SUPERFAMILY SSF55811 14 184 2.83E-25 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS06530 95e86f34653e90a1431d218eb87c486a 196 PANTHER PTHR12992 15 189 2.2E-27 T 20-04-2016 APRE_RS06530 95e86f34653e90a1431d218eb87c486a 196 Pfam PF00293 NUDIX domain 17 127 9.4E-12 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 SMART SM00332 2 239 1.5E-22 T 20-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 PANTHER PTHR13832:SF278 1 236 2.2E-46 T 20-04-2016 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 SUPERFAMILY SSF81606 2 239 2.22E-56 T 20-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 PANTHER PTHR13832 1 236 2.2E-46 T 20-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 Gene3D G3DSA:3.60.40.10 2 239 3.0E-59 T 20-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 SMART SM00331 7 241 7.8E-30 T 20-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APRE_RS03475 653b98bd47e876bef247c50e20d22ebd 241 Pfam PF13672 Protein phosphatase 2C 14 203 1.1E-18 T 20-04-2016 APRE_RS05215 40303d5a4f23e0b6298ba1edc0683edf 216 Hamap MF_00238 Cytidylate kinase [cmk]. 3 214 31.664 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APRE_RS05215 40303d5a4f23e0b6298ba1edc0683edf 216 PANTHER PTHR21299 4 211 1.1E-53 T 20-04-2016 APRE_RS05215 40303d5a4f23e0b6298ba1edc0683edf 216 Pfam PF02224 Cytidylate kinase 5 210 9.0E-72 T 20-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APRE_RS05215 40303d5a4f23e0b6298ba1edc0683edf 216 Gene3D G3DSA:3.40.50.300 3 210 3.6E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05215 40303d5a4f23e0b6298ba1edc0683edf 216 SUPERFAMILY SSF52540 2 211 9.94E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05215 40303d5a4f23e0b6298ba1edc0683edf 216 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 209 2.2E-66 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 Gene3D G3DSA:3.40.50.720 2 143 2.6E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 142 8.1E-44 T 20-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PIRSF PIRSF000102 1 310 1.1E-109 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 SUPERFAMILY SSF51735 3 144 1.2E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 310 2.5E-41 T 20-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 3 311 44.638 T 20-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 2.7E-42 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 2.7E-42 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 2.7E-42 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PRINTS PR00086 L-lactate dehydrogenase signature 30 54 2.7E-42 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 2.7E-42 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 SUPERFAMILY SSF56327 143 309 9.22E-58 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PANTHER PTHR11540:SF3 1 309 6.7E-141 T 20-04-2016 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 PANTHER PTHR11540 1 309 6.7E-141 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 172 178 - T 20-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 8 305 5.4E-126 T 20-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APRE_RS05435 2238eb296319ec5645ef3a3d50b5530c 311 Gene3D G3DSA:3.90.110.10 144 309 2.6E-62 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 129 157 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 Gene3D G3DSA:2.160.10.10 64 173 5.6E-35 T 20-04-2016 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 Gene3D G3DSA:1.10.3130.10 12 63 2.0E-8 T 20-04-2016 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 PANTHER PTHR23416:SF55 12 175 5.1E-71 T 20-04-2016 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 PIRSF PIRSF000441 2 175 5.1E-68 T 20-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 PANTHER PTHR23416 12 175 5.1E-71 T 20-04-2016 APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 SUPERFAMILY SSF51161 10 172 8.73E-51 T 20-04-2016 IPR011004 Trimeric LpxA-like APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 153 6.7E-12 T 20-04-2016 IPR001451 Hexapeptide repeat APRE_RS04875 3a6494b89774aeb11f8e80313d70dbf3 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 110 7.0E-6 T 20-04-2016 IPR001451 Hexapeptide repeat APRE_RS05680 ecbb7e99ba08bf673bd7b501ef433584 431 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 427 53.611 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APRE_RS05680 ecbb7e99ba08bf673bd7b501ef433584 431 PANTHER PTHR30557:SF1 1 428 2.0E-242 T 20-04-2016 APRE_RS05680 ecbb7e99ba08bf673bd7b501ef433584 431 Pfam PF01964 Radical SAM ThiC family 5 420 1.4E-194 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APRE_RS05680 ecbb7e99ba08bf673bd7b501ef433584 431 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 419 2.8E-174 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APRE_RS05680 ecbb7e99ba08bf673bd7b501ef433584 431 PANTHER PTHR30557 1 428 2.0E-242 T 20-04-2016 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Gene3D G3DSA:3.10.20.30 268 365 1.6E-43 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Gene3D G3DSA:1.10.150.300 129 197 2.2E-25 T 20-04-2016 IPR023192 TGS-like domain APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Pfam PF01926 50S ribosome-binding GTPase 3 116 2.0E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PANTHER PTHR23305:SF12 1 365 1.1E-192 T 20-04-2016 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 SUPERFAMILY SSF81271 281 365 2.18E-31 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PIRSF PIRSF006641 1 365 1.1E-152 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 7.2E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 7.2E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 7.2E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 7.2E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 PANTHER PTHR23305 1 365 1.1E-192 T 20-04-2016 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 365 1.0E-144 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 365 42.238 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 2.4E-35 T 20-04-2016 IPR013029 Domain of unknown function DUF933 APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Gene3D G3DSA:3.40.50.300 198 267 4.8E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 Gene3D G3DSA:3.40.50.300 2 128 4.8E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05340 27a0c7cb4134d1f9ed557d13669fa07c 365 SUPERFAMILY SSF52540 1 303 8.82E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 6.6E-61 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 6.6E-61 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00145 Argininosuccinate lyase family signature 275 291 6.6E-61 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 6.6E-61 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00145 Argininosuccinate lyase family signature 310 329 6.6E-61 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00145 Argininosuccinate lyase family signature 193 209 6.6E-61 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 Gene3D G3DSA:1.10.275.10 1 106 4.7E-36 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 455 9.1E-178 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 ProSitePatterns PS00163 Fumarate lyases signature. 275 284 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 Pfam PF14698 Argininosuccinate lyase C-terminal 363 431 5.1E-22 T 20-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 Pfam PF00206 Lyase 8 298 1.0E-72 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 Gene3D G3DSA:1.20.200.10 107 374 1.4E-97 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 7.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 7.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 7.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 7.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 453 39.537 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PANTHER PTHR11444 2 455 3.6E-215 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 Gene3D G3DSA:1.10.40.30 375 432 4.7E-26 T 20-04-2016 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 SUPERFAMILY SSF48557 3 455 1.23E-136 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APRE_RS02580 9abb0ee2e74f1d8311971d1a7659a70b 457 PANTHER PTHR11444:SF3 2 455 3.6E-215 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PANTHER PTHR22762 325 683 2.2E-76 T 20-04-2016 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PANTHER PTHR22762:SF81 325 683 2.2E-76 T 20-04-2016 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 ProSitePatterns PS00512 Alpha-galactosidase signature. 353 368 - T 20-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 352 367 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 460 475 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 286 306 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 235 250 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 324 338 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 513 529 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 538 554 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PRINTS PR00743 Glycosyl hydrolase family 36 signature 402 424 1.0E-61 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 PIRSF PIRSF005536 1 720 3.5E-264 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 Pfam PF02065 Melibiase 283 628 7.6E-158 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 SUPERFAMILY SSF51445 321 639 1.95E-103 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 26 279 1.9E-68 T 20-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 643 717 2.4E-15 T 20-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS01320 8d1f8bef9572beda6dc084d0a4a3a172 722 Gene3D G3DSA:3.20.20.70 320 618 4.5E-47 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 SUPERFAMILY SSF54980 296 373 1.8E-15 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Pfam PF03144 Elongation factor Tu domain 2 208 278 8.5E-13 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Gene3D G3DSA:3.40.50.300 1 197 2.9E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PANTHER PTHR23115 1 600 4.7E-272 T 20-04-2016 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Pfam PF00009 Elongation factor Tu GTP binding domain 5 184 1.4E-51 T 20-04-2016 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PANTHER PTHR23115:SF175 1 600 4.7E-272 T 20-04-2016 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Gene3D G3DSA:3.30.70.870 296 372 9.4E-21 T 20-04-2016 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Gene3D G3DSA:3.30.70.240 405 494 1.6E-22 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 3.5E-51 T 20-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Gene3D G3DSA:2.40.30.10 198 293 4.1E-26 T 20-04-2016 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 SMART SM00838 402 490 2.9E-4 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Pfam PF00679 Elongation factor G C-terminus 403 490 3.1E-24 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 SUPERFAMILY SSF52540 1 232 9.69E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 TIGRFAM TIGR01393 lepA: elongation factor 4 6 600 1.5E-295 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 285.058 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PRINTS PR00315 GTP-binding elongation factor signature 129 138 4.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PRINTS PR00315 GTP-binding elongation factor signature 77 87 4.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PRINTS PR00315 GTP-binding elongation factor signature 93 104 4.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 PRINTS PR00315 GTP-binding elongation factor signature 52 60 4.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 SUPERFAMILY SSF54980 403 498 6.23E-25 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS06015 0bb588812ebf1219ae4c5e327fdb11bf 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 176 6.1E-21 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS04735 6dea735345395e069f6fe8b574cb08b1 102 PANTHER PTHR21349 1 100 9.0E-49 T 20-04-2016 APRE_RS04735 6dea735345395e069f6fe8b574cb08b1 102 SUPERFAMILY SSF141091 1 101 3.14E-41 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APRE_RS04735 6dea735345395e069f6fe8b574cb08b1 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 4.2E-43 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APRE_RS04735 6dea735345395e069f6fe8b574cb08b1 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.918 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04735 6dea735345395e069f6fe8b574cb08b1 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.5E-40 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04735 6dea735345395e069f6fe8b574cb08b1 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 20-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 668 890 4.8E-77 T 20-04-2016 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 321 571 8.3E-31 T 20-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 254 5.5E-22 T 20-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 Gene3D G3DSA:3.30.420.40 96 232 5.1E-44 T 20-04-2016 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 Gene3D G3DSA:3.30.420.40 415 556 3.4E-47 T 20-04-2016 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 320 574 5.1E-39 T 20-04-2016 IPR008275 CoA enzyme activase APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 SUPERFAMILY SSF53067 319 574 9.02E-46 T 20-04-2016 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 PANTHER PTHR32329:SF4 3 1421 0.0 T 20-04-2016 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 PANTHER PTHR32329 3 1421 0.0 T 20-04-2016 APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 906 1231 3.1E-47 T 20-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit APRE_RS01725 a22d9441396857cda99195b8d169e2ef 1424 SUPERFAMILY SSF53067 4 254 5.3E-51 T 20-04-2016 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 Gene3D G3DSA:3.40.50.300 194 400 1.3E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 SMART SM00382 199 352 1.0E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 SUPERFAMILY SSF52540 200 399 2.95E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 SUPERFAMILY SSF47364 97 178 3.4E-22 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 Pfam PF02881 SRP54-type protein, helical bundle domain 114 179 4.5E-12 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 PANTHER PTHR11564 93 400 1.0E-126 T 20-04-2016 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 398 57.823 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 SMART SM00962 200 400 1.8E-101 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 127 400 3.5E-108 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 SMART SM00963 103 184 4.7E-20 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 Pfam PF00448 SRP54-type protein, GTPase domain 201 399 4.3E-77 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 374 387 - T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 PANTHER PTHR11564:SF16 93 400 1.0E-126 T 20-04-2016 APRE_RS04895 55064ac44f43655a7c78088f201ebba7 400 Gene3D G3DSA:1.20.120.140 92 180 1.7E-28 T 20-04-2016 APRE_RS05560 999a696ca0c16754058111ea62eb8230 657 Pfam PF02687 FtsX-like permease family 61 183 5.5E-14 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APRE_RS05560 999a696ca0c16754058111ea62eb8230 657 PANTHER PTHR30489 5 644 6.2E-24 T 20-04-2016 APRE_RS05560 999a696ca0c16754058111ea62eb8230 657 PIRSF PIRSF018968 5 657 7.9E-58 T 20-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 Gene3D G3DSA:2.20.120.10 332 364 3.5E-5 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 Pfam PF13529 Peptidase_C39 like family 433 560 2.0E-9 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 Gene3D G3DSA:2.10.270.10 216 286 9.5E-10 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 Gene3D G3DSA:2.10.270.10 287 331 3.7E-9 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 Gene3D G3DSA:2.10.270.10 153 207 5.2E-5 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 Gene3D G3DSA:2.10.270.10 365 402 4.4E-4 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 SUPERFAMILY SSF69360 153 189 5.89E-25 T 20-04-2016 APRE_RS00470 58995476e98b03d296a6080d91b896b7 587 SUPERFAMILY SSF69360 216 402 5.89E-25 T 20-04-2016 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 PANTHER PTHR11014 5 390 1.1E-123 T 20-04-2016 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 Pfam PF01546 Peptidase family M20/M25/M40 69 379 7.0E-20 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 Pfam PF07687 Peptidase dimerisation domain 181 278 1.8E-14 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 373 5.7E-95 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 PANTHER PTHR11014:SF63 5 390 1.1E-123 T 20-04-2016 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 PIRSF PIRSF005962 1 390 4.9E-111 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 SUPERFAMILY SSF53187 294 388 6.65E-69 T 20-04-2016 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 SUPERFAMILY SSF53187 3 193 6.65E-69 T 20-04-2016 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 SUPERFAMILY SSF55031 181 292 7.72E-28 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 Gene3D G3DSA:3.30.70.360 179 293 5.9E-35 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 Gene3D G3DSA:3.40.630.10 5 174 2.4E-82 T 20-04-2016 APRE_RS05405 4bb0cf7299aa5cbf347766d90d4a8fa5 391 Gene3D G3DSA:3.40.630.10 294 388 2.4E-82 T 20-04-2016 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 PANTHER PTHR33317 3 136 1.1E-42 T 20-04-2016 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 25.108 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 SMART SM00732 2 102 4.2E-33 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 134 3.7E-41 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 Pfam PF03652 Holliday junction resolvase 3 134 6.8E-42 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 Gene3D G3DSA:3.30.420.140 2 137 1.1E-47 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APRE_RS04795 dc41d24fb2bb710b702b843ee5397780 139 SUPERFAMILY SSF53098 2 136 1.97E-41 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS04075 617ca54f4820296b72b3803252063aeb 159 PANTHER PTHR11911 1 159 1.2E-18 T 20-04-2016 APRE_RS04075 617ca54f4820296b72b3803252063aeb 159 SUPERFAMILY SSF54631 15 134 1.18E-26 T 20-04-2016 APRE_RS04075 617ca54f4820296b72b3803252063aeb 159 PANTHER PTHR11911:SF103 1 159 1.2E-18 T 20-04-2016 APRE_RS04075 617ca54f4820296b72b3803252063aeb 159 Gene3D G3DSA:3.10.580.10 4 145 2.5E-24 T 20-04-2016 APRE_RS04075 617ca54f4820296b72b3803252063aeb 159 Pfam PF00571 CBS domain 19 68 5.7E-8 T 20-04-2016 IPR000644 CBS domain APRE_RS04075 617ca54f4820296b72b3803252063aeb 159 SMART SM00116 23 71 1.6E-4 T 20-04-2016 IPR000644 CBS domain APRE_RS04555 839db904fce8732964291826ca7e65de 315 PANTHER PTHR11135:SF1 3 302 3.6E-89 T 20-04-2016 IPR005911 Protein YhcC-like GO:0051536 APRE_RS04555 839db904fce8732964291826ca7e65de 315 SUPERFAMILY SSF102114 6 257 1.29E-33 T 20-04-2016 APRE_RS04555 839db904fce8732964291826ca7e65de 315 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 303 3.4E-86 T 20-04-2016 IPR005911 Protein YhcC-like GO:0051536 APRE_RS04555 839db904fce8732964291826ca7e65de 315 PANTHER PTHR11135 3 302 3.6E-89 T 20-04-2016 APRE_RS04555 839db904fce8732964291826ca7e65de 315 Pfam PF16199 Radical_SAM C-terminal domain 212 290 7.1E-19 T 20-04-2016 IPR032432 Radical SAM, C-terminal extension APRE_RS04555 839db904fce8732964291826ca7e65de 315 Gene3D G3DSA:3.80.30.20 21 255 1.0E-24 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS04555 839db904fce8732964291826ca7e65de 315 SMART SM00729 22 250 4.2E-27 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS04555 839db904fce8732964291826ca7e65de 315 Pfam PF04055 Radical SAM superfamily 42 204 5.7E-8 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 Pfam PF00312 Ribosomal protein S15 7 87 3.1E-36 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 21.678 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 PANTHER PTHR23321 6 87 1.4E-36 T 20-04-2016 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 87 4.0E-25 T 20-04-2016 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 ProSitePatterns PS00362 Ribosomal protein S15 signature. 38 68 - T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 87 3.9E-38 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 Gene3D G3DSA:1.10.287.10 2 87 2.2E-37 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 SUPERFAMILY SSF47060 2 87 3.24E-34 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APRE_RS03220 1fae1215678f7b95fc66d189f64940ae 88 SMART SM01387 7 87 3.9E-49 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08220 252a38c1df1ed925c3a594f4fa959216 424 PANTHER PTHR33171:SF3 1 408 1.1E-99 T 20-04-2016 APRE_RS08220 252a38c1df1ed925c3a594f4fa959216 424 Pfam PF09861 Domain of unknown function (DUF2088) 7 212 3.2E-69 T 20-04-2016 IPR018657 Domain of unknown function DUF2088 APRE_RS08220 252a38c1df1ed925c3a594f4fa959216 424 PANTHER PTHR33171 1 408 1.1E-99 T 20-04-2016 APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 SUPERFAMILY SSF54631 205 342 1.05E-28 T 20-04-2016 APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 PANTHER PTHR22777 15 440 2.0E-97 T 20-04-2016 APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 Pfam PF01595 Domain of unknown function DUF21 15 201 2.7E-27 T 20-04-2016 IPR002550 Domain of unknown function DUF21 APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 SUPERFAMILY SSF56176 352 442 1.28E-18 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 Gene3D G3DSA:3.30.465.10 333 435 1.9E-23 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 SMART SM01091 354 436 1.4E-17 T 20-04-2016 IPR005170 Transporter-associated domain APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 Pfam PF03471 Transporter associated domain 356 435 1.1E-19 T 20-04-2016 IPR005170 Transporter-associated domain APRE_RS08610 35168ce2695aa44bc4d1e18fe7ad70e2 443 Gene3D G3DSA:3.10.580.10 204 332 1.8E-17 T 20-04-2016 APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 SUPERFAMILY SSF52540 162 272 3.94E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 SUPERFAMILY SSF52540 347 517 3.94E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 PANTHER PTHR30121 1 528 2.6E-19 T 20-04-2016 APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 Pfam PF05872 Bacterial protein of unknown function (DUF853) 413 484 2.7E-7 T 20-04-2016 IPR033186 Helicase HerA-like C-terminal APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 Gene3D G3DSA:3.40.50.300 370 514 7.0E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 Gene3D G3DSA:3.40.50.300 151 240 7.0E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 SMART SM00382 177 492 3.1E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01900 720f86c13d8e162f780d09c02efac23e 540 Pfam PF01935 Domain of unknown function DUF87 168 330 1.2E-13 T 20-04-2016 IPR002789 Helicase HerA, central domain APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 PANTHER PTHR21012 2 117 1.0E-59 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.0E-52 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 118 2.5E-49 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 66.817 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 96 1.0E-33 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 Gene3D G3DSA:2.40.40.20 1 122 5.7E-55 T 20-04-2016 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 PIRSF PIRSF006246 1 126 4.4E-51 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 SUPERFAMILY SSF50692 1 121 1.86E-48 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain APRE_RS00605 72325cca0bd8119a4a9766f2ef908b26 127 PANTHER PTHR21012:SF0 2 117 1.0E-59 T 20-04-2016 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 SUPERFAMILY SSF50249 3 110 8.19E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Gene3D G3DSA:3.30.930.10 412 581 2.9E-108 T 20-04-2016 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Gene3D G3DSA:3.30.930.10 135 279 2.9E-108 T 20-04-2016 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Pfam PF02938 GAD domain 311 404 1.4E-23 T 20-04-2016 IPR029351 GAD domain APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 SUPERFAMILY SSF55681 422 581 1.22E-99 T 20-04-2016 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 SUPERFAMILY SSF55681 109 295 1.22E-99 T 20-04-2016 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 561 34.532 T 20-04-2016 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 580 5.2E-233 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Gene3D G3DSA:3.30.1360.30 280 411 1.2E-42 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PANTHER PTHR22594:SF5 368 569 7.2E-238 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PANTHER PTHR22594:SF5 4 300 7.2E-238 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Pfam PF01336 OB-fold nucleic acid binding domain 21 103 9.9E-15 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PANTHER PTHR22594 368 569 7.2E-238 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PANTHER PTHR22594 4 300 7.2E-238 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Gene3D G3DSA:2.40.50.140 4 109 4.5E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 SUPERFAMILY SSF55261 292 418 2.78E-38 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 8.6E-24 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 8.6E-24 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 8.6E-24 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 8.6E-24 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS04670 cdfcb3ce525b9ca7df0049f2fade0aa0 582 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 556 2.8E-104 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Gene3D G3DSA:1.20.1110.10 599 889 9.7E-115 T 20-04-2016 IPR023298 P-type ATPase, transmembrane domain APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Gene3D G3DSA:1.20.1110.10 55 107 9.7E-115 T 20-04-2016 IPR023298 P-type ATPase, transmembrane domain APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF56784 476 735 1.25E-63 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF56784 322 342 1.25E-63 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF81665 224 318 2.22E-126 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF81665 680 889 2.22E-126 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF81665 3 113 2.22E-126 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Pfam PF00122 E1-E2 ATPase 81 315 2.2E-68 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Gene3D G3DSA:3.40.1110.10 314 535 1.8E-70 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 602 618 3.5E-14 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 662 687 3.5E-14 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 630 646 3.5E-14 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SMART SM00831 1 75 6.1E-18 T 20-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Pfam PF00689 Cation transporting ATPase, C-terminus 714 886 5.0E-47 T 20-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 2.6E-41 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 2.6E-41 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 649 2.6E-41 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 550 560 2.6E-41 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 539 2.6E-41 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 2.6E-41 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PANTHER PTHR24093 6 766 0.0 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 PANTHER PTHR24093 782 890 0.0 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF81653 112 221 2.09E-32 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Gene3D G3DSA:2.70.150.10 12 54 3.4E-44 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Gene3D G3DSA:2.70.150.10 108 223 3.4E-44 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 SUPERFAMILY SSF81660 331 532 4.58E-61 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Pfam PF00702 haloacid dehalogenase-like hydrolase 321 644 7.6E-24 T 20-04-2016 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 70 1.3E-19 T 20-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 174 4.1E-21 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 597 719 3.0E-35 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 346 1.5E-26 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00555 e66836cf5676ad8f059fe575529d55ec 890 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APRE_RS05370 5d7e30b394b1d333d34586053fa1df68 167 Pfam PF01965 DJ-1/PfpI family 2 164 9.1E-40 T 20-04-2016 IPR002818 DJ-1/PfpI APRE_RS05370 5d7e30b394b1d333d34586053fa1df68 167 SUPERFAMILY SSF52317 1 166 1.05E-37 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS05370 5d7e30b394b1d333d34586053fa1df68 167 PANTHER PTHR11019:SF115 2 163 9.8E-39 T 20-04-2016 APRE_RS05370 5d7e30b394b1d333d34586053fa1df68 167 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 167 8.7E-43 T 20-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 APRE_RS05370 5d7e30b394b1d333d34586053fa1df68 167 PANTHER PTHR11019 2 163 9.8E-39 T 20-04-2016 APRE_RS05370 5d7e30b394b1d333d34586053fa1df68 167 Gene3D G3DSA:3.40.50.880 1 167 8.9E-42 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 SMART SM00968 524 637 2.7E-22 T 20-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1168 1.1E-247 T 20-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 Gene3D G3DSA:3.40.50.300 2 151 3.4E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1171 18.681 T 20-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 Pfam PF06470 SMC proteins Flexible Hinge Domain 526 636 9.2E-24 T 20-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1162 1.3E-50 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 PANTHER PTHR18937 233 1168 6.3E-185 T 20-04-2016 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 PANTHER PTHR18937 1 186 6.3E-185 T 20-04-2016 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 SUPERFAMILY SSF52540 1068 1161 2.01E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 SUPERFAMILY SSF52540 1 208 2.01E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 PIRSF PIRSF005719 1 1172 4.6E-239 T 20-04-2016 IPR024704 Structural maintenance of chromosomes protein APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 SUPERFAMILY SSF75553 488 686 1.7E-31 T 20-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 Gene3D G3DSA:3.40.50.300 833 958 1.2E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 Gene3D G3DSA:3.40.50.300 1019 1169 1.2E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 PANTHER PTHR18937:SF171 233 1168 6.3E-185 T 20-04-2016 APRE_RS03450 21becd3e13860cf960b12bff0c8a9a2c 1172 PANTHER PTHR18937:SF171 1 186 6.3E-185 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 57.619 T 20-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 2.0E-84 T 20-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 Gene3D G3DSA:3.30.420.40 1 251 2.2E-103 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 Gene3D G3DSA:3.30.420.40 253 497 7.2E-99 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 20-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 SUPERFAMILY SSF53067 253 495 7.77E-79 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 PANTHER PTHR10196:SF9 1 501 1.7E-249 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 PIRSF PIRSF000538 2 501 4.6E-179 T 20-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 SUPERFAMILY SSF53067 3 253 6.05E-94 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 20-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 PANTHER PTHR10196 1 501 1.7E-249 T 20-04-2016 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 1.4E-224 T 20-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APRE_RS07655 f392f64e54c514d0bf099c515f36ee57 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 449 2.2E-58 T 20-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 255 387 4.3E-28 T 20-04-2016 IPR008136 CinA, C-terminal APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 PIRSF PIRSF006728 1 397 4.0E-108 T 20-04-2016 IPR008135 Competence-induced protein CinA APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 Gene3D G3DSA:3.90.950.20 240 393 8.0E-39 T 20-04-2016 IPR008136 CinA, C-terminal APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 SUPERFAMILY SSF53218 1 168 8.77E-31 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 392 4.8E-73 T 20-04-2016 IPR008135 Competence-induced protein CinA APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 PANTHER PTHR13939 1 400 3.4E-123 T 20-04-2016 APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 SUPERFAMILY SSF142433 242 391 1.01E-36 T 20-04-2016 IPR008136 CinA, C-terminal APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 PANTHER PTHR13939:SF0 1 400 3.4E-123 T 20-04-2016 APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 Pfam PF00994 Probable molybdopterin binding domain 5 163 1.0E-29 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 401 108.092 T 20-04-2016 IPR008135 Competence-induced protein CinA APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 SMART SM00852 4 169 1.3E-31 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 Gene3D G3DSA:3.40.980.10 1 165 1.0E-27 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS08825 d0aab157afa88b8ce0fff7590be87c29 401 Pfam PF02464 Competence-damaged protein 250 390 4.6E-36 T 20-04-2016 IPR008136 CinA, C-terminal APRE_RS03325 0bd2fe5f3bf6578fa572cea974ce1d31 251 SMART SM00382 26 213 2.7E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03325 0bd2fe5f3bf6578fa572cea974ce1d31 251 Pfam PF00005 ABC transporter 20 164 1.3E-23 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03325 0bd2fe5f3bf6578fa572cea974ce1d31 251 Gene3D G3DSA:3.40.50.300 1 227 2.6E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03325 0bd2fe5f3bf6578fa572cea974ce1d31 251 SUPERFAMILY SSF52540 2 225 7.59E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03325 0bd2fe5f3bf6578fa572cea974ce1d31 251 PANTHER PTHR24220:SF471 3 249 3.0E-123 T 20-04-2016 APRE_RS03325 0bd2fe5f3bf6578fa572cea974ce1d31 251 PANTHER PTHR24220 3 249 3.0E-123 T 20-04-2016 APRE_RS06695 3c55f56bc5cb7badab24b0a2eb557c4d 177 PANTHER PTHR41780 1 176 9.2E-31 T 20-04-2016 APRE_RS06695 3c55f56bc5cb7badab24b0a2eb557c4d 177 Pfam PF07456 Heptaprenyl diphosphate synthase component I 14 159 5.2E-43 T 20-04-2016 IPR010898 Heptaprenyl diphosphate synthase component I APRE_RS06695 3c55f56bc5cb7badab24b0a2eb557c4d 177 PANTHER PTHR41780:SF1 1 176 9.2E-31 T 20-04-2016 APRE_RS06695 3c55f56bc5cb7badab24b0a2eb557c4d 177 PIRSF PIRSF027391 1 176 1.6E-49 T 20-04-2016 IPR014535 Predicted heptaprenyl diphosphate synthase, component I APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 Gene3D G3DSA:3.40.50.720 11 121 1.5E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 PANTHER PTHR22604:SF53 1 255 1.7E-70 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 PANTHER PTHR22604:SF53 276 355 1.7E-70 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 SUPERFAMILY SSF51735 12 139 6.23E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 SUPERFAMILY SSF55347 114 258 3.43E-32 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 PANTHER PTHR22604 1 255 1.7E-70 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 PANTHER PTHR22604 276 355 1.7E-70 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 121 218 1.0E-10 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 Gene3D G3DSA:3.30.360.10 292 346 5.9E-41 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 Gene3D G3DSA:3.30.360.10 122 245 5.9E-41 T 20-04-2016 APRE_RS08185 939ec2ccd67f50b964b84a647cd28379 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 106 5.8E-13 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APRE_RS02550 50b23f22cb4e4f3250a407b46bcb4933 315 PANTHER PTHR36512:SF3 6 303 1.0E-72 T 20-04-2016 APRE_RS02550 50b23f22cb4e4f3250a407b46bcb4933 315 PANTHER PTHR36512 6 303 1.0E-72 T 20-04-2016 APRE_RS02550 50b23f22cb4e4f3250a407b46bcb4933 315 Gene3D G3DSA:3.60.70.12 6 304 8.4E-59 T 20-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APRE_RS02550 50b23f22cb4e4f3250a407b46bcb4933 315 Pfam PF03576 Peptidase family S58 6 306 5.0E-46 T 20-04-2016 IPR005321 Peptidase S58, DmpA APRE_RS02550 50b23f22cb4e4f3250a407b46bcb4933 315 SUPERFAMILY SSF56266 5 306 1.94E-54 T 20-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Gene3D G3DSA:3.30.70.260 649 721 1.8E-12 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Pfam PF13291 ACT domain 648 723 3.5E-15 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Gene3D G3DSA:3.30.460.10 183 330 2.9E-50 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 PANTHER PTHR21262 3 726 0.0 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Gene3D G3DSA:3.10.20.30 394 457 2.4E-20 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 SMART SM00954 240 350 4.0E-59 T 20-04-2016 IPR007685 RelA/SpoT GO:0015969 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 SUPERFAMILY SSF109604 9 195 2.42E-72 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 SUPERFAMILY SSF55021 650 724 2.1E-10 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 SMART SM00471 46 158 4.4E-8 T 20-04-2016 IPR003607 HD/PDEase domain APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 PANTHER PTHR21262:SF0 3 726 0.0 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 SUPERFAMILY SSF81301 185 399 2.13E-62 T 20-04-2016 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Pfam PF02824 TGS domain 395 454 5.5E-21 T 20-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 7.1E-37 T 20-04-2016 IPR007685 RelA/SpoT GO:0015969 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 722 1.2E-235 T 20-04-2016 IPR004811 RelA/SpoT family GO:0015969 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 SUPERFAMILY SSF81271 382 455 6.32E-21 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APRE_RS04655 84ff041105cd10e9b8018cb81b18a195 726 Pfam PF13328 HD domain 31 180 5.5E-46 T 20-04-2016 IPR003607 HD/PDEase domain APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PANTHER PTHR11958 112 382 2.3E-61 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PANTHER PTHR11958 7 17 2.3E-61 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 Gene3D G3DSA:1.10.3860.10 1 385 7.6E-64 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PANTHER PTHR11958:SF53 112 382 2.3E-61 T 20-04-2016 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PANTHER PTHR11958:SF53 7 17 2.3E-61 T 20-04-2016 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PRINTS PR00173 Glutamate-aspartate symporter signature 273 299 3.4E-6 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 3.4E-6 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 PRINTS PR00173 Glutamate-aspartate symporter signature 336 356 3.4E-6 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 Pfam PF00375 Sodium:dicarboxylate symporter family 6 381 1.3E-78 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05430 3d4844b5855e785f406f6f0f6e6e2d49 401 SUPERFAMILY SSF118215 6 381 3.53E-79 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 PANTHER PTHR11804:SF45 15 591 6.6E-166 T 20-04-2016 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 4 590 1.3E-173 T 20-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 Gene3D G3DSA:3.40.390.10 374 418 5.7E-6 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 SUPERFAMILY SSF55486 48 592 1.28E-91 T 20-04-2016 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 PANTHER PTHR11804 15 591 6.6E-166 T 20-04-2016 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 Pfam PF01432 Peptidase family M3 197 579 9.2E-34 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APRE_RS08435 1d4ea37f30cd2ae621c7b61299571e27 599 Pfam PF08439 Oligopeptidase F 114 176 6.4E-12 T 20-04-2016 IPR013647 Oligopeptidase F, N-terminal domain APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 SUPERFAMILY SSF52343 91 237 2.36E-24 T 20-04-2016 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 Gene3D G3DSA:2.40.30.10 3 94 3.6E-23 T 20-04-2016 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 Gene3D G3DSA:2.10.240.10 200 237 3.1E-17 T 20-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 Gene3D G3DSA:3.40.50.80 96 198 5.8E-20 T 20-04-2016 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 SUPERFAMILY SSF63380 4 96 6.21E-17 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 PANTHER PTHR19370 9 227 1.2E-44 T 20-04-2016 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 200 237 1.5E-16 T 20-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 PANTHER PTHR19370:SF68 9 227 1.2E-44 T 20-04-2016 APRE_RS04050 74d1991c1b79544b9094dc7f91a72664 239 PIRSF PIRSF006816 1 239 6.5E-58 T 20-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 APRE_RS02655 1d241431718b70382634731ea530d426 266 SUPERFAMILY SSF81345 3 251 6.67E-30 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS02655 1d241431718b70382634731ea530d426 266 Pfam PF00950 ABC 3 transport family 4 254 9.0E-53 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APRE_RS02655 1d241431718b70382634731ea530d426 266 PANTHER PTHR30477 1 262 3.6E-64 T 20-04-2016 APRE_RS02655 1d241431718b70382634731ea530d426 266 Gene3D G3DSA:1.10.3470.10 43 260 1.4E-11 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS02655 1d241431718b70382634731ea530d426 266 PANTHER PTHR30477:SF0 1 262 3.6E-64 T 20-04-2016 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 PANTHER PTHR11207 11 235 3.2E-61 T 20-04-2016 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 SUPERFAMILY SSF54768 122 235 2.36E-22 T 20-04-2016 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 Gene3D G3DSA:3.30.160.20 167 234 3.6E-25 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 Gene3D G3DSA:1.10.1520.10 9 161 1.1E-44 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 Hamap MF_00104 Ribonuclease 3 [rnc]. 14 231 27.393 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 Pfam PF00035 Double-stranded RNA binding motif 168 233 6.3E-16 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 SUPERFAMILY SSF69065 5 158 1.01E-42 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 SMART SM00358 168 235 1.1E-20 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 ProSitePatterns PS00517 Ribonuclease III family signature. 49 57 - T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 234 1.1E-68 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 Pfam PF14622 Ribonuclease-III-like 24 151 1.4E-29 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APRE_RS03440 f487b1bf15afb8526802ed6d1c7f38d2 239 SMART SM00535 26 160 7.8E-36 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APRE_RS04690 f02bba324ed11789ae3f8890bb881d03 191 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 190 5.1E-52 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APRE_RS04690 f02bba324ed11789ae3f8890bb881d03 191 PANTHER PTHR30309:SF0 1 191 2.0E-58 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APRE_RS04690 f02bba324ed11789ae3f8890bb881d03 191 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 191 19.1 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APRE_RS04690 f02bba324ed11789ae3f8890bb881d03 191 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 182 4.5E-49 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APRE_RS04690 f02bba324ed11789ae3f8890bb881d03 191 SMART SM01207 7 183 2.3E-71 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APRE_RS04690 f02bba324ed11789ae3f8890bb881d03 191 PANTHER PTHR30309 1 191 2.0E-58 T 20-04-2016 APRE_RS00860 defe7dc2d879b792867f237c441d8693 253 PANTHER PTHR24220 4 205 1.3E-49 T 20-04-2016 APRE_RS00860 defe7dc2d879b792867f237c441d8693 253 Gene3D G3DSA:3.40.50.300 3 208 6.7E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00860 defe7dc2d879b792867f237c441d8693 253 SMART SM00382 27 206 4.8E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00860 defe7dc2d879b792867f237c441d8693 253 SUPERFAMILY SSF52540 5 209 4.42E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00860 defe7dc2d879b792867f237c441d8693 253 Pfam PF00005 ABC transporter 18 159 3.6E-21 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 Pfam PF00825 Ribonuclease P 1 106 8.5E-29 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 111 6.0E-15 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 PANTHER PTHR33992 1 106 4.1E-29 T 20-04-2016 APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 106 6.1E-27 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 Gene3D G3DSA:3.30.230.10 1 106 4.1E-31 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 SUPERFAMILY SSF54211 1 107 8.34E-28 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS08865 0a1627b60629f5155075925ba77c5084 116 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 109 16.831 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 PANTHER PTHR20852 177 391 9.4E-53 T 20-04-2016 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 Pfam PF00120 Glutamine synthetase, catalytic domain 184 360 1.2E-21 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 SUPERFAMILY SSF55931 428 570 1.18E-57 T 20-04-2016 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 SUPERFAMILY SSF55931 183 387 1.18E-57 T 20-04-2016 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 SMART SM01230 162 446 2.2E-24 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 308 323 - T 20-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 PANTHER PTHR20852:SF14 177 391 9.4E-53 T 20-04-2016 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 Pfam PF12437 Glutamine synthetase type III N terminal 4 161 1.1E-67 T 20-04-2016 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 Gene3D G3DSA:3.30.590.10 428 569 6.1E-73 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APRE_RS02350 0ead886985a8d95a86fe32b908835a70 688 Gene3D G3DSA:3.30.590.10 171 387 6.1E-73 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 SUPERFAMILY SSF56601 2 285 1.28E-44 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 PANTHER PTHR21581:SF1 36 263 9.4E-39 T 20-04-2016 APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 Gene3D G3DSA:3.40.710.10 30 270 2.6E-57 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 7.3E-11 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 7.3E-11 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 7.3E-11 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 PANTHER PTHR21581 36 263 9.4E-39 T 20-04-2016 APRE_RS00710 e339d93c30c126c9f274bc1156da67a2 288 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 265 4.0E-36 T 20-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APRE_RS05995 d1e17bd919a6dde3f96bfdc658482b24 280 PANTHER PTHR23091:SF279 3 213 2.9E-25 T 20-04-2016 APRE_RS05995 d1e17bd919a6dde3f96bfdc658482b24 280 Pfam PF13302 Acetyltransferase (GNAT) domain 14 152 1.7E-20 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS05995 d1e17bd919a6dde3f96bfdc658482b24 280 PANTHER PTHR23091 3 213 2.9E-25 T 20-04-2016 APRE_RS05995 d1e17bd919a6dde3f96bfdc658482b24 280 Gene3D G3DSA:3.40.630.30 2 182 3.4E-30 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS05995 d1e17bd919a6dde3f96bfdc658482b24 280 SUPERFAMILY SSF55729 7 156 1.19E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 SUPERFAMILY SSF48557 4 461 2.51E-139 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 Pfam PF10415 Fumarase C C-terminus 407 460 4.1E-19 T 20-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 Pfam PF00206 Lyase 12 341 1.9E-91 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 PANTHER PTHR11444 1 463 1.1E-222 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 Gene3D G3DSA:1.10.275.10 3 138 3.1E-53 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 Gene3D G3DSA:1.20.200.10 139 416 1.7E-83 T 20-04-2016 APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 6.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.0E-28 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 Gene3D G3DSA:1.10.40.30 417 467 2.5E-21 T 20-04-2016 APRE_RS00475 baefd2b2c5935af5a757dfefeecc4f1c 472 PANTHER PTHR11444:SF25 1 463 1.1E-222 T 20-04-2016 APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 Pfam PF01895 PhoU domain 18 100 1.8E-7 T 20-04-2016 IPR026022 PhoU domain APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 Pfam PF01895 PhoU domain 125 200 6.1E-8 T 20-04-2016 IPR026022 PhoU domain APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 SUPERFAMILY SSF109755 5 200 2.3E-30 T 20-04-2016 APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 Gene3D G3DSA:1.20.58.220 125 200 1.5E-10 T 20-04-2016 APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 Gene3D G3DSA:1.20.58.220 1 100 3.8E-14 T 20-04-2016 APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 PANTHER PTHR10010 1 205 3.4E-15 T 20-04-2016 APRE_RS07065 3fae5c910863de4b6dfb199c2112c4eb 205 PANTHER PTHR10010:SF14 1 205 3.4E-15 T 20-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 Pfam PF13411 MerR HTH family regulatory protein 5 72 6.9E-17 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 Gene3D G3DSA:3.20.80.10 134 289 2.0E-14 T 20-04-2016 IPR011256 Regulatory factor, effector binding domain APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 SUPERFAMILY SSF46955 4 100 8.06E-25 T 20-04-2016 IPR009061 Putative DNA-binding domain APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 PANTHER PTHR30204:SF22 2 290 8.6E-28 T 20-04-2016 APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 PANTHER PTHR30204 2 290 8.6E-28 T 20-04-2016 APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 Gene3D G3DSA:1.10.1660.10 61 103 4.9E-4 T 20-04-2016 APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 SUPERFAMILY SSF55136 176 288 4.97E-10 T 20-04-2016 IPR011256 Regulatory factor, effector binding domain APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 Gene3D G3DSA:1.10.1660.10 3 60 8.7E-24 T 20-04-2016 APRE_RS06975 6920998ef4c410f662b89732f35a37fe 290 SMART SM00422 5 75 1.7E-17 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 Gene3D G3DSA:3.40.50.300 243 438 2.4E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 789 22.675 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 SMART SM00487 253 447 1.7E-20 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 SUPERFAMILY SSF52540 226 434 1.09E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 Pfam PF00270 DEAD/DEAH box helicase 259 420 6.1E-15 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 SUPERFAMILY SSF52540 518 691 4.98E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 Pfam PF00271 Helicase conserved C-terminal domain 551 646 5.1E-8 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 SMART SM00490 550 647 1.8E-11 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 TIGRFAM TIGR00595 priA: primosomal protein N' 277 772 8.9E-181 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 PANTHER PTHR30580 2 790 2.3E-230 T 20-04-2016 APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 Gene3D G3DSA:3.40.50.300 551 690 8.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04900 8d2570bcd0c3e919d30bbe9649f0dab2 790 Gene3D G3DSA:3.40.50.300 465 486 8.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 SMART SM00739 153 180 8.1E-5 T 20-04-2016 IPR005824 KOW APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 SUPERFAMILY SSF50104 151 206 6.45E-15 T 20-04-2016 IPR008991 Translation protein SH3-like domain APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 Pfam PF00467 KOW motif 156 181 3.1E-6 T 20-04-2016 IPR005824 KOW APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 SUPERFAMILY SSF82679 39 141 1.7E-31 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 Pfam PF02357 Transcription termination factor nusG 40 141 4.5E-25 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 SMART SM00738 38 145 2.1E-34 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 PRINTS PR00338 Transcription termination factor NUSG signature 183 199 2.1E-14 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 PRINTS PR00338 Transcription termination factor NUSG signature 165 180 2.1E-14 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 PRINTS PR00338 Transcription termination factor NUSG signature 92 104 2.1E-14 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 Gene3D G3DSA:3.30.70.940 39 141 9.0E-37 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 Gene3D G3DSA:2.30.30.30 147 206 6.8E-21 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 PANTHER PTHR30265 5 207 3.7E-50 T 20-04-2016 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 38 207 19.614 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APRE_RS05850 9c574e684c9cac6968fa53a9be4d50e9 207 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 41 207 2.1E-50 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 PANTHER PTHR24220 5 247 1.1E-84 T 20-04-2016 APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 PANTHER PTHR24220:SF589 5 247 1.1E-84 T 20-04-2016 APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 Pfam PF00005 ABC transporter 26 161 5.8E-35 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 Gene3D G3DSA:3.40.50.300 4 216 7.9E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 SMART SM00382 34 237 7.7E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 SUPERFAMILY SSF52540 6 240 2.52E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02785 c805fba95eef162d00fe2dc60c11f568 247 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 Pfam PF01595 Domain of unknown function DUF21 11 188 4.2E-51 T 20-04-2016 IPR002550 Domain of unknown function DUF21 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 Gene3D G3DSA:3.10.580.10 189 316 2.5E-21 T 20-04-2016 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 SMART SM01091 337 413 2.3E-16 T 20-04-2016 IPR005170 Transporter-associated domain APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 Gene3D G3DSA:3.30.465.10 317 412 3.1E-23 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 SUPERFAMILY SSF54631 190 325 3.77E-31 T 20-04-2016 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 SUPERFAMILY SSF56176 335 412 9.82E-18 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 PANTHER PTHR22777 6 411 3.5E-139 T 20-04-2016 APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 Pfam PF00571 CBS domain 203 260 2.8E-5 T 20-04-2016 IPR000644 CBS domain APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 Pfam PF00571 CBS domain 272 322 1.5E-4 T 20-04-2016 IPR000644 CBS domain APRE_RS02120 8b7302bf59b43fed7ae3a9be06cfe3ef 414 Pfam PF03471 Transporter associated domain 338 412 1.4E-19 T 20-04-2016 IPR005170 Transporter-associated domain APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 PANTHER PTHR32182:SF0 1 352 1.0E-38 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 Pfam PF13175 AAA ATPase domain 1 317 1.3E-11 T 20-04-2016 APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 343 1.1E-84 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 PANTHER PTHR32182 1 352 1.0E-38 T 20-04-2016 APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 72.535 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 Gene3D G3DSA:3.40.50.300 235 345 2.4E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 Gene3D G3DSA:3.40.50.300 1 170 2.4E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00020 71d1e61ea54c9f5c5a18737302078d13 359 SUPERFAMILY SSF52540 1 358 2.9E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 SUPERFAMILY SSF52172 1 176 2.56E-41 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 SMART SM00448 1 112 2.1E-38 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 PANTHER PTHR26402:SF578 1 220 3.1E-74 T 20-04-2016 APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 Gene3D G3DSA:1.10.10.10 125 220 8.0E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.6E-21 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 Gene3D G3DSA:3.40.50.2300 1 124 5.2E-40 T 20-04-2016 APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 SMART SM00862 145 220 4.7E-20 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 PANTHER PTHR26402 1 220 3.1E-74 T 20-04-2016 APRE_RS00450 5b4c8cd47cc7b2e594626641f80f6f9b 223 Pfam PF00072 Response regulator receiver domain 3 112 7.7E-30 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 1.2E-16 T 20-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 SUPERFAMILY SSF53738 257 366 4.71E-28 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 442 1.8E-161 T 20-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 39.59 T 20-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 SUPERFAMILY SSF55957 359 444 9.16E-23 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 133 2.5E-40 T 20-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Gene3D G3DSA:3.30.310.50 369 443 2.3E-20 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 PANTHER PTHR22573:SF15 1 444 5.6E-137 T 20-04-2016 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Gene3D G3DSA:3.40.120.10 250 368 2.0E-35 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 365 1.1E-30 T 20-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 20-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.7E-14 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Gene3D G3DSA:3.40.120.10 175 249 2.5E-23 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 PANTHER PTHR22573 1 444 5.6E-137 T 20-04-2016 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 SUPERFAMILY SSF53738 157 256 3.3E-27 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 SUPERFAMILY SSF53738 2 180 1.24E-43 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 Gene3D G3DSA:3.40.120.10 2 141 3.6E-42 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 7.9E-12 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 7.9E-12 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05870 eb108e6fad52d4dd11f7c3fc8a7fe839 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 7.9E-12 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS05510 c7c0cc8074966d7ad48981004966c37e 325 Gene3D G3DSA:3.30.1180.20 182 321 9.4E-52 T 20-04-2016 APRE_RS05510 c7c0cc8074966d7ad48981004966c37e 325 SUPERFAMILY SSF82549 1 321 2.62E-119 T 20-04-2016 APRE_RS05510 c7c0cc8074966d7ad48981004966c37e 325 Gene3D G3DSA:3.40.50.10440 11 181 5.6E-71 T 20-04-2016 APRE_RS05510 c7c0cc8074966d7ad48981004966c37e 325 PANTHER PTHR28629 1 317 9.9E-149 T 20-04-2016 APRE_RS05510 c7c0cc8074966d7ad48981004966c37e 325 Pfam PF02733 Dak1 domain 18 321 2.0E-122 T 20-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 APRE_RS05510 c7c0cc8074966d7ad48981004966c37e 325 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 321 8.8E-138 T 20-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 SUPERFAMILY SSF51161 284 356 3.21E-9 T 20-04-2016 IPR011004 Trimeric LpxA-like APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 4 375 46.098 T 20-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 Gene3D G3DSA:3.90.550.10 308 351 2.2E-85 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 Gene3D G3DSA:3.90.550.10 8 271 2.2E-85 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 Pfam PF00483 Nucleotidyl transferase 9 260 2.0E-67 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 100 108 - T 20-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 8 357 1.4E-139 T 20-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 SUPERFAMILY SSF53448 325 337 1.1E-83 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 SUPERFAMILY SSF53448 5 264 1.1E-83 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 191 201 - T 20-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 PANTHER PTHR22572 8 358 3.8E-160 T 20-04-2016 APRE_RS04445 ee778bd96f231142423c3c5e9ef7704d 377 PANTHER PTHR22572:SF10 8 358 3.8E-160 T 20-04-2016 APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 Pfam PF01300 Telomere recombination 24 198 2.1E-53 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 PANTHER PTHR17490:SF3 2 342 4.5E-116 T 20-04-2016 APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 PIRSF PIRSF004930 1 343 1.6E-115 T 20-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 PANTHER PTHR17490 2 342 4.5E-116 T 20-04-2016 APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 Gene3D G3DSA:3.90.870.10 4 205 1.5E-69 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 SUPERFAMILY SSF55821 5 211 9.46E-61 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 208 2.3E-61 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APRE_RS03905 2f15b42ae6932ec609feae125ee781f9 344 Pfam PF03481 Putative GTP-binding controlling metal-binding 201 338 5.2E-23 T 20-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.3E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.3E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 SUPERFAMILY SSF46689 3 65 1.09E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 8.4E-13 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 PANTHER PTHR30055:SF27 3 179 2.3E-16 T 20-04-2016 APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 PANTHER PTHR30055 3 179 2.3E-16 T 20-04-2016 APRE_RS05590 6403a93e07f904f4395d87298f02def4 192 Gene3D G3DSA:1.10.357.10 2 174 9.8E-29 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APRE_RS00565 8a3a6ce5b4e59d3786147614bda4ccba 167 Pfam PF04525 LURP-one-related 14 139 2.4E-11 T 20-04-2016 IPR007612 LURP1-related protein domain APRE_RS00565 8a3a6ce5b4e59d3786147614bda4ccba 167 SUPERFAMILY SSF54518 2 154 3.66E-23 T 20-04-2016 IPR025659 Tubby C-terminal-like domain APRE_RS08685 c50d4b35ffb9b1d543e11dec3cd7556c 108 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 103 1.5E-23 T 20-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV APRE_RS08685 c50d4b35ffb9b1d543e11dec3cd7556c 108 PANTHER PTHR37309 1 108 1.2E-14 T 20-04-2016 APRE_RS08685 c50d4b35ffb9b1d543e11dec3cd7556c 108 PANTHER PTHR37309:SF1 1 108 1.2E-14 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 Gene3D G3DSA:3.40.190.10 141 277 5.6E-21 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PIRSF PIRSF019574 1 355 1.3E-120 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PANTHER PTHR30222:SF5 12 353 8.7E-101 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 Gene3D G3DSA:3.40.190.10 34 139 8.4E-61 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 Gene3D G3DSA:3.40.190.10 278 320 8.4E-61 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PANTHER PTHR30222 12 353 8.7E-101 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 SUPERFAMILY SSF53850 36 351 5.24E-87 T 20-04-2016 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 7.9E-53 T 20-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APRE_RS06235 6439871752c05c44f061d149e1cb6fb5 359 Pfam PF13416 Bacterial extracellular solute-binding protein 50 309 3.9E-35 T 20-04-2016 APRE_RS01445 f209c2c716465d0845d3dadf6ff9d1a6 421 PANTHER PTHR11119:SF49 2 406 1.7E-129 T 20-04-2016 APRE_RS01445 f209c2c716465d0845d3dadf6ff9d1a6 421 Pfam PF00860 Permease family 20 383 4.7E-85 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS01445 f209c2c716465d0845d3dadf6ff9d1a6 421 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 408 8.7E-106 T 20-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APRE_RS01445 f209c2c716465d0845d3dadf6ff9d1a6 421 PANTHER PTHR11119 2 406 1.7E-129 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 Gene3D G3DSA:3.40.50.300 334 572 3.6E-83 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 SUPERFAMILY SSF90123 6 311 2.09E-39 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 Gene3D G3DSA:1.20.1560.10 5 302 6.4E-30 T 20-04-2016 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 SMART SM00382 358 544 2.6E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 SUPERFAMILY SSF52540 325 566 9.29E-91 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 PANTHER PTHR24221:SF195 6 577 1.8E-174 T 20-04-2016 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 PANTHER PTHR24221 6 577 1.8E-174 T 20-04-2016 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 Pfam PF00005 ABC transporter 349 498 3.2E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 Pfam PF00664 ABC transporter transmembrane region 26 287 3.2E-12 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03600 5885612abdf9ba8ddc8d8dc69c8564ca 578 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS05045 843429a5d218e7edb734fd4f4c9e6fe5 91 Pfam PF02583 Metal-sensitive transcriptional repressor 4 87 4.1E-25 T 20-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 APRE_RS05045 843429a5d218e7edb734fd4f4c9e6fe5 91 PANTHER PTHR33677 3 90 1.5E-20 T 20-04-2016 APRE_RS05615 0a0f9bb51a122159ff6f278adf1032ca 335 SUPERFAMILY SSF53659 2 329 2.88E-118 T 20-04-2016 APRE_RS05615 0a0f9bb51a122159ff6f278adf1032ca 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 222 241 - T 20-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APRE_RS05615 0a0f9bb51a122159ff6f278adf1032ca 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 327 1.4E-102 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APRE_RS05615 0a0f9bb51a122159ff6f278adf1032ca 335 Gene3D G3DSA:3.40.718.10 3 331 1.8E-128 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APRE_RS05615 0a0f9bb51a122159ff6f278adf1032ca 335 SMART SM01329 2 326 8.7E-165 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APRE_RS05615 0a0f9bb51a122159ff6f278adf1032ca 335 PANTHER PTHR11835 3 330 3.3E-164 T 20-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APRE_RS06600 e2a010518cd328578be42d173296021a 74 PANTHER PTHR34654 1 74 9.3E-15 T 20-04-2016 APRE_RS06600 e2a010518cd328578be42d173296021a 74 Gene3D G3DSA:3.30.300.120 6 67 8.7E-6 T 20-04-2016 APRE_RS06600 e2a010518cd328578be42d173296021a 74 Pfam PF13083 KH domain 2 74 6.8E-18 T 20-04-2016 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 PIRSF PIRSF005650 1 238 6.3E-82 T 20-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 Gene3D G3DSA:3.40.1160.10 2 235 3.4E-78 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 PANTHER PTHR21499 4 234 1.6E-98 T 20-04-2016 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 234 2.4E-90 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 41.218 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 Pfam PF00696 Amino acid kinase family 5 212 3.7E-24 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 SUPERFAMILY SSF53633 3 234 1.14E-65 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS03375 12fa20b531653d5206c04425aefe3755 238 PANTHER PTHR21499:SF23 4 234 1.6E-98 T 20-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APRE_RS02130 0c193562c8e93660cfd75f194dc27433 171 PANTHER PTHR22769:SF37 30 147 2.5E-15 T 20-04-2016 APRE_RS02130 0c193562c8e93660cfd75f194dc27433 171 ProSitePatterns PS00893 Nudix box signature. 65 86 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APRE_RS02130 0c193562c8e93660cfd75f194dc27433 171 Pfam PF00293 NUDIX domain 30 152 2.2E-15 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APRE_RS02130 0c193562c8e93660cfd75f194dc27433 171 PANTHER PTHR22769 30 147 2.5E-15 T 20-04-2016 APRE_RS02130 0c193562c8e93660cfd75f194dc27433 171 Gene3D G3DSA:3.90.79.10 1 156 1.2E-34 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS02130 0c193562c8e93660cfd75f194dc27433 171 SUPERFAMILY SSF55811 2 160 2.3E-28 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 SUPERFAMILY SSF47781 141 210 1.67E-25 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 SMART SM00278 160 179 0.0046 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 SMART SM00278 189 208 400.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 Gene3D G3DSA:1.10.150.280 121 211 2.8E-23 T 20-04-2016 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 Pfam PF12836 Helix-hairpin-helix motif 148 210 1.8E-19 T 20-04-2016 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 148 211 1.6E-17 T 20-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 SUPERFAMILY SSF142984 68 103 1.83E-5 T 20-04-2016 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 Pfam PF10531 SLBB domain 69 123 1.9E-14 T 20-04-2016 IPR019554 Soluble ligand binding domain APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 Gene3D G3DSA:3.10.560.10 63 120 1.2E-12 T 20-04-2016 APRE_RS04775 1439ffbca238369c135f3df048aa0a7b 211 PANTHER PTHR21180 70 211 1.2E-34 T 20-04-2016 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Pfam PF09382 RQC domain 398 508 4.9E-34 T 20-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Gene3D G3DSA:1.10.10.10 335 508 3.9E-52 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 PANTHER PTHR13710 1 594 2.7E-255 T 20-04-2016 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 591 1.7E-239 T 20-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SMART SM00487 13 209 1.6E-31 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SMART SM00490 241 322 1.0E-28 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SUPERFAMILY SSF46785 393 511 1.25E-34 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Gene3D G3DSA:1.10.150.80 519 593 3.0E-23 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SUPERFAMILY SSF47819 519 592 1.48E-22 T 20-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Pfam PF00570 HRDC domain 523 589 2.9E-21 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Gene3D G3DSA:3.40.50.300 5 192 2.4E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SUPERFAMILY SSF52540 57 340 1.72E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SMART SM00956 402 505 3.8E-40 T 20-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 3.2E-152 T 20-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 SMART SM00341 519 594 6.1E-16 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 PANTHER PTHR13710:SF81 1 594 2.7E-255 T 20-04-2016 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Pfam PF00271 Helicase conserved C-terminal domain 213 322 2.1E-20 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Pfam PF16124 RecQ zinc-binding 334 395 7.5E-15 T 20-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Pfam PF00270 DEAD/DEAH box helicase 20 180 8.8E-21 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APRE_RS07260 6962e36d2d226512a443bdfe0f97faa8 594 Gene3D G3DSA:3.40.50.300 199 334 7.7E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 PANTHER PTHR33569:SF1 2 100 5.4E-44 T 20-04-2016 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 SUPERFAMILY SSF54111 1 99 8.37E-46 T 20-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 Pfam PF00547 Urease, gamma subunit 1 99 3.0E-48 T 20-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 Gene3D G3DSA:3.30.280.10 1 99 2.9E-49 T 20-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.661 T 20-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 PANTHER PTHR33569 2 100 5.4E-44 T 20-04-2016 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.2E-50 T 20-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 PIRSF PIRSF001223 1 100 5.6E-50 T 20-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03755 7fac590aaa2bb7d64ad399e7b9bdf870 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-36 T 20-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 202 214 7.629777E-12 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 375 391 7.629777E-12 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 415 429 7.629777E-12 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 218 231 7.629777E-12 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 SUPERFAMILY SSF50249 10 99 5.36E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 453 2.0E-84 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 456 2.4E-178 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 SUPERFAMILY SSF55681 112 454 7.26E-95 T 20-04-2016 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 460 43.093 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 Gene3D G3DSA:2.40.50.140 9 102 3.2E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PANTHER PTHR22594:SF6 193 456 1.5E-224 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PANTHER PTHR22594:SF6 1 174 1.5E-224 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PANTHER PTHR22594 193 456 1.5E-224 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 PANTHER PTHR22594 1 174 1.5E-224 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06095 e651e2077abb3c882474bf67fdf15875 462 Gene3D G3DSA:3.30.930.10 103 456 3.4E-111 T 20-04-2016 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 140 193 3.5E-12 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 SUPERFAMILY SSF63999 1 118 2.88E-25 T 20-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 SMART SM00983 114 196 5.9E-9 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 SUPERFAMILY SSF63862 126 197 9.81E-7 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 5 198 4.4E-44 T 20-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 22 118 1.7E-17 T 20-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 Gene3D G3DSA:2.60.120.320 118 196 1.4E-8 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 PANTHER PTHR41299 2 204 1.6E-20 T 20-04-2016 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 PANTHER PTHR41299:SF1 2 204 1.6E-20 T 20-04-2016 APRE_RS02200 27b5396aee5d6a00586cc161723d5c32 204 Gene3D G3DSA:3.40.50.10240 1 117 1.2E-23 T 20-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 PRINTS PR00069 Aldo-keto reductase signature 192 216 2.5E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 PRINTS PR00069 Aldo-keto reductase signature 35 59 2.5E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.5E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 PRINTS PR00069 Aldo-keto reductase signature 120 137 2.5E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 PRINTS PR00069 Aldo-keto reductase signature 153 182 2.5E-35 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 PANTHER PTHR11732 1 266 1.0E-109 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 Pfam PF00248 Aldo/keto reductase family 15 256 5.5E-47 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 SUPERFAMILY SSF51430 3 265 1.27E-78 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 225 240 - T 20-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APRE_RS02870 2a4851f7451f94c832d9a9ca46529660 278 Gene3D G3DSA:3.20.20.100 2 269 1.0E-85 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 Gene3D G3DSA:2.40.50.140 2 132 3.2E-37 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 Pfam PF07497 Rho termination factor, RNA-binding domain 62 132 4.8E-26 T 20-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 SMART SM00959 3 45 3.4E-9 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 165 379 3.0E-26 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 Gene3D G3DSA:3.40.50.300 139 429 5.7E-90 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 PANTHER PTHR15184 1 434 2.6E-146 T 20-04-2016 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 Pfam PF07498 Rho termination factor, N-terminal domain 4 45 1.5E-10 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 SUPERFAMILY SSF68912 2 44 1.84E-6 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 SUPERFAMILY SSF52540 127 387 3.33E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 SMART SM00357 62 120 6.6E-5 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 431 1.4E-165 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 SMART SM00382 175 371 4.6E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 SUPERFAMILY SSF50249 61 132 1.43E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 PANTHER PTHR15184:SF34 1 434 2.6E-146 T 20-04-2016 APRE_RS03880 31b13df0160d1e167dc4589ffe14b25c 434 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 433 174.31 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 SUPERFAMILY SSF51735 4 165 1.51E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 170 - T 20-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 Gene3D G3DSA:3.40.50.720 3 166 8.2E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 2.9E-48 T 20-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 SUPERFAMILY SSF56327 169 441 5.72E-84 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PANTHER PTHR32092 2 442 7.0E-270 T 20-04-2016 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PANTHER PTHR32092:SF7 2 442 7.0E-270 T 20-04-2016 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 185 3.2E-59 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 3.2E-53 T 20-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APRE_RS02410 161c1fc9cc12785837406a910f068b2f 442 Gene3D G3DSA:3.90.110.10 168 441 2.1E-94 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 TIGRFAM TIGR00059 L17: ribosomal protein bL17 5 113 2.2E-45 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 PANTHER PTHR14413 5 113 1.7E-54 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 2 113 27.861 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 Gene3D G3DSA:3.90.1030.10 3 113 3.1E-49 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 ProSitePatterns PS01167 Ribosomal protein L17 signature. 31 53 - T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 SUPERFAMILY SSF64263 4 113 1.28E-45 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07930 14fe6cc92ffd1723ff9cc4c42acdef85 113 Pfam PF01196 Ribosomal protein L17 17 113 3.6E-40 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 SUPERFAMILY SSF51338 4 182 6.38E-61 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 Pfam PF01979 Amidohydrolase family 130 457 2.6E-72 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 20-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PANTHER PTHR22642 25 301 6.3E-223 T 20-04-2016 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PANTHER PTHR22642 325 507 6.3E-223 T 20-04-2016 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 124 8.2E-53 T 20-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 Gene3D G3DSA:2.30.40.10 70 139 6.1E-12 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 ProSitePatterns PS00145 Urease active site. 322 338 - T 20-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PANTHER PTHR22642:SF7 25 301 6.3E-223 T 20-04-2016 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PANTHER PTHR22642:SF7 325 507 6.3E-223 T 20-04-2016 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 SUPERFAMILY SSF51556 486 573 1.85E-184 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS03765 7e743b604886d2f65381faccbd525334 573 SUPERFAMILY SSF51556 135 437 1.85E-184 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS03765 7e743b604886d2f65381faccbd525334 573 SUPERFAMILY SSF51338 415 485 1.53E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 Gene3D G3DSA:3.20.20.140 494 570 5.4E-194 T 20-04-2016 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 Gene3D G3DSA:3.20.20.140 140 435 5.4E-194 T 20-04-2016 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 3.1E-32 T 20-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 433 446 3.1E-32 T 20-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 3.1E-32 T 20-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 407 422 3.1E-32 T 20-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 Hamap MF_01953 Urease subunit alpha [ureC]. 3 573 54.112 T 20-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03765 7e743b604886d2f65381faccbd525334 573 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 573 2.7E-283 T 20-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 SMART SM00354 3 73 6.9E-29 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 Pfam PF13377 Periplasmic binding protein-like domain 171 332 2.6E-27 T 20-04-2016 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 SUPERFAMILY SSF53822 63 333 4.91E-56 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 5.6E-20 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 8.4E-7 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 8.4E-7 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 Gene3D G3DSA:3.40.50.2300 57 178 5.3E-37 T 20-04-2016 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 Gene3D G3DSA:1.10.260.40 4 56 5.9E-26 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 PANTHER PTHR30146 3 333 7.0E-93 T 20-04-2016 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 Gene3D G3DSA:3.40.50.2300 179 312 5.1E-36 T 20-04-2016 APRE_RS04510 7accd17d0637176bb79793f4a1ce40c6 336 SUPERFAMILY SSF47413 3 61 6.17E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 SUPERFAMILY SSF109998 49 212 5.49E-30 T 20-04-2016 IPR027304 Trigger factor/SurA domain APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 Pfam PF13616 PPIC-type PPIASE domain 171 272 1.0E-28 T 20-04-2016 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 SUPERFAMILY SSF54534 173 271 7.36E-34 T 20-04-2016 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 PANTHER PTHR10657:SF11 48 325 6.3E-63 T 20-04-2016 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 Gene3D G3DSA:3.10.50.40 184 293 8.7E-43 T 20-04-2016 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 Hamap MF_01145 Foldase protein PrsA [prsA]. 1 321 16.915 T 20-04-2016 IPR023059 Foldase protein PrsA GO:0003755 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 PANTHER PTHR10657 48 325 6.3E-63 T 20-04-2016 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 Pfam PF13624 SurA N-terminal domain 43 155 8.6E-13 T 20-04-2016 APRE_RS04935 0190d4eb7860ef60925130aecd8e3fdc 359 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 211 232 - T 20-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Gene3D G3DSA:1.10.8.60 753 832 2.2E-14 T 20-04-2016 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 742 817 2.3E-10 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 SUPERFAMILY SSF52540 533 828 7.96E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 PANTHER PTHR11638:SF18 1 833 5.0E-295 T 20-04-2016 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Pfam PF07724 AAA domain (Cdc48 subfamily) 583 736 1.7E-40 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 333 1.7E-10 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Gene3D G3DSA:1.10.1780.10 5 139 9.2E-23 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Gene3D G3DSA:3.40.50.300 539 752 1.2E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 PANTHER PTHR11638 1 833 5.0E-295 T 20-04-2016 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 633 651 3.7E-32 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 588 606 3.7E-32 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 662 680 3.7E-32 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 695 709 3.7E-32 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 SUPERFAMILY SSF81923 5 138 2.88E-20 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 SMART SM00382 197 343 9.6E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 SMART SM00382 584 743 8.9E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Gene3D G3DSA:3.40.50.300 160 338 3.5E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 SUPERFAMILY SSF52540 159 510 3.87E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Gene3D G3DSA:1.10.8.60 343 425 2.2E-30 T 20-04-2016 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 134 0.0091 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 1.7E-4 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00150 761d93aebd97d01d4b57a8b64ac5c24e 834 SMART SM01086 742 831 5.9E-10 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Pfam PF13184 NusA-like KH domain 229 296 1.0E-25 T 20-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SMART SM00322 303 373 4.2 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SMART SM00322 229 302 0.0021 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Gene3D G3DSA:2.40.50.140 129 197 2.4E-21 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SUPERFAMILY SSF50249 132 198 1.91E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Pfam PF00575 S1 RNA binding domain 134 187 3.8E-5 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 408 28.803 T 20-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 8.0E-123 T 20-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 PANTHER PTHR22648 1 433 2.0E-135 T 20-04-2016 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SUPERFAMILY SSF69705 1 125 3.79E-39 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SUPERFAMILY SSF54814 278 342 7.41E-15 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Gene3D G3DSA:3.30.300.20 277 344 1.5E-29 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SUPERFAMILY SSF54814 200 276 5.89E-28 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Gene3D G3DSA:3.30.1480.10 1 124 5.9E-42 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Gene3D G3DSA:3.30.300.20 198 276 1.4E-32 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 PANTHER PTHR22648:SF0 1 433 2.0E-135 T 20-04-2016 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 Pfam PF08529 NusA N-terminal domain 4 124 3.7E-38 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APRE_RS03185 69e6143efa59873ac13d4d0af75b081b 433 SMART SM00316 133 199 6.4E-5 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 PANTHER PTHR11019 21 273 1.8E-60 T 20-04-2016 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 1.4E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 1.4E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 Gene3D G3DSA:1.10.10.60 228 273 1.7E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 SUPERFAMILY SSF46689 188 224 7.89E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 Gene3D G3DSA:1.10.10.60 178 227 1.8E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 269 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 Pfam PF02311 AraC-like ligand binding domain 16 126 1.3E-22 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 Gene3D G3DSA:2.60.120.280 7 159 1.9E-27 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 SMART SM00342 190 273 1.0E-32 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 SUPERFAMILY SSF51215 10 158 9.94E-22 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 SUPERFAMILY SSF46689 226 273 8.6E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 Pfam PF12833 Helix-turn-helix domain 196 273 1.1E-23 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS01315 c0821cabc0ad07d776b550996067e7a5 273 PANTHER PTHR11019:SF103 21 273 1.8E-60 T 20-04-2016 APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 SUPERFAMILY SSF52283 19 123 1.98E-26 T 20-04-2016 APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 Gene3D G3DSA:3.40.50.720 115 286 2.1E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 SUPERFAMILY SSF51735 103 284 1.01E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 310 1.5E-26 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 PANTHER PTHR10996 11 310 3.2E-89 T 20-04-2016 APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 Gene3D G3DSA:3.40.50.720 2 114 2.5E-26 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APRE_RS06500 dc45c9542e04de3e2680fb67f511bcef 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 283 4.7E-51 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 PANTHER PTHR10314:SF110 3 302 6.8E-126 T 20-04-2016 APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 Gene3D G3DSA:3.40.50.1100 38 133 6.6E-39 T 20-04-2016 APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 300 2.0E-118 T 20-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 PANTHER PTHR10314 3 302 6.8E-126 T 20-04-2016 APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 289 2.1E-71 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 SUPERFAMILY SSF53686 2 300 4.06E-95 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 Gene3D G3DSA:3.40.50.1100 134 301 1.8E-73 T 20-04-2016 APRE_RS04880 e690da9108b2c8326f51e2f9c3a57906 305 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 300 1.1E-115 T 20-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APRE_RS00810 78aa7de3ed5e37c3e1b7c4888ac0be65 385 SUPERFAMILY SSF53756 1 371 2.44E-72 T 20-04-2016 APRE_RS00810 78aa7de3ed5e37c3e1b7c4888ac0be65 385 PANTHER PTHR12526 1 374 1.9E-66 T 20-04-2016 APRE_RS00810 78aa7de3ed5e37c3e1b7c4888ac0be65 385 Pfam PF00534 Glycosyl transferases group 1 190 347 6.0E-29 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APRE_RS00810 78aa7de3ed5e37c3e1b7c4888ac0be65 385 Gene3D G3DSA:3.40.50.2000 165 335 4.0E-24 T 20-04-2016 APRE_RS00810 78aa7de3ed5e37c3e1b7c4888ac0be65 385 Pfam PF13439 Glycosyltransferase Family 4 14 181 1.4E-30 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APRE_RS00305 5ef66a97c1014382a5cf481a6f66d77a 462 Gene3D G3DSA:3.40.190.10 189 378 1.9E-38 T 20-04-2016 APRE_RS00305 5ef66a97c1014382a5cf481a6f66d77a 462 PANTHER PTHR30061 1 462 1.7E-110 T 20-04-2016 APRE_RS00305 5ef66a97c1014382a5cf481a6f66d77a 462 PANTHER PTHR30061:SF7 1 462 1.7E-110 T 20-04-2016 APRE_RS00305 5ef66a97c1014382a5cf481a6f66d77a 462 Pfam PF13416 Bacterial extracellular solute-binding protein 77 389 3.6E-52 T 20-04-2016 APRE_RS00305 5ef66a97c1014382a5cf481a6f66d77a 462 SUPERFAMILY SSF53850 58 451 4.13E-77 T 20-04-2016 APRE_RS00305 5ef66a97c1014382a5cf481a6f66d77a 462 Gene3D G3DSA:3.40.190.10 59 188 1.0E-14 T 20-04-2016 APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 PANTHER PTHR30619 1 709 3.8E-108 T 20-04-2016 APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 SUPERFAMILY SSF56281 484 702 1.1E-36 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 Pfam PF13567 Domain of unknown function (DUF4131) 10 162 1.1E-11 T 20-04-2016 IPR025405 Domain of unknown function DUF4131 APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 Gene3D G3DSA:3.60.15.10 479 694 6.6E-32 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 PANTHER PTHR30619:SF2 1 709 3.8E-108 T 20-04-2016 APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 Pfam PF00753 Metallo-beta-lactamase superfamily 491 578 7.8E-7 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 127 698 1.6E-72 T 20-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 SMART SM00849 492 673 1.9E-4 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 218 384 2.1E-21 T 20-04-2016 IPR004477 ComEC/Rec2-related protein APRE_RS06035 e5f9561d9e8d527806539caaddf048a4 722 Pfam PF03772 Competence protein 209 451 7.8E-41 T 20-04-2016 IPR004477 ComEC/Rec2-related protein APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SUPERFAMILY SSF56672 475 877 2.22E-148 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 ProSitePatterns PS00447 DNA polymerase family A signature. 705 724 - T 20-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SMART SM00482 637 843 3.8E-112 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Pfam PF01612 3'-5' exonuclease 331 425 3.5E-8 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:1.20.1060.10 497 614 3.2E-37 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:1.10.150.20 186 246 1.4E-23 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 TIGRFAM TIGR00593 pola: DNA polymerase I 5 878 5.7E-288 T 20-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SUPERFAMILY SSF53098 303 472 2.58E-30 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 674 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 742 753 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 694 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 839 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 606 628 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 775 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 812 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 730 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 629 644 3.7E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 266 2.2E-28 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:3.30.420.10 305 495 3.6E-42 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PANTHER PTHR10133 1 879 0.0 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:3.30.70.370 615 662 3.7E-60 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:3.30.70.370 770 877 3.7E-60 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 PANTHER PTHR10133:SF27 1 879 0.0 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SUPERFAMILY SSF88723 2 170 1.12E-51 T 20-04-2016 IPR029060 PIN domain-like APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:3.40.50.1010 4 185 1.3E-60 T 20-04-2016 IPR029060 PIN domain-like APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SMART SM00279 173 208 4.4E-12 T 20-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Gene3D G3DSA:1.10.150.20 663 769 2.2E-36 T 20-04-2016 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SUPERFAMILY SSF47807 171 285 4.34E-29 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 170 8.0E-47 T 20-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 Pfam PF00476 DNA polymerase family A 503 874 6.5E-151 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SMART SM00475 2 262 4.8E-117 T 20-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APRE_RS06745 22e3df69d8dff95218e4417ad687ce91 879 SMART SM00474 299 471 7.4E-4 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APRE_RS01195 a257cd3e477a670c99cf0c0e45bc7edf 257 Gene3D G3DSA:3.40.50.1820 8 256 2.9E-38 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS01195 a257cd3e477a670c99cf0c0e45bc7edf 257 Pfam PF12146 Serine aminopeptidase, S33 34 148 3.9E-18 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APRE_RS01195 a257cd3e477a670c99cf0c0e45bc7edf 257 SUPERFAMILY SSF53474 7 256 9.11E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS01195 a257cd3e477a670c99cf0c0e45bc7edf 257 PANTHER PTHR12277 7 246 1.3E-20 T 20-04-2016 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 PANTHER PTHR11091 1 334 5.1E-99 T 20-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 Gene3D G3DSA:3.30.60.50 182 220 4.3E-19 T 20-04-2016 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 Gene3D G3DSA:3.30.1370.60 221 272 1.2E-45 T 20-04-2016 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 Gene3D G3DSA:3.30.1370.60 73 170 1.2E-45 T 20-04-2016 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 Pfam PF02615 Malate/L-lactate dehydrogenase 3 331 3.1E-97 T 20-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 PANTHER PTHR11091:SF3 1 334 5.1E-99 T 20-04-2016 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 SUPERFAMILY SSF89733 1 335 1.15E-84 T 20-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APRE_RS03030 a182f78bccb02e662d0750be4f93fece 337 Gene3D G3DSA:1.10.1530.10 1 72 9.4E-21 T 20-04-2016 APRE_RS07675 0a0d04f871a94901778aaa4dad1ec1a1 107 SUPERFAMILY SSF46785 4 95 1.21E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07675 0a0d04f871a94901778aaa4dad1ec1a1 107 Gene3D G3DSA:1.10.10.10 2 103 2.4E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07675 0a0d04f871a94901778aaa4dad1ec1a1 107 PANTHER PTHR33169:SF1 1 94 6.2E-33 T 20-04-2016 APRE_RS07675 0a0d04f871a94901778aaa4dad1ec1a1 107 Pfam PF03551 Transcriptional regulator PadR-like family 14 85 2.0E-22 T 20-04-2016 IPR005149 Transcription regulator PadR, N-terminal APRE_RS07675 0a0d04f871a94901778aaa4dad1ec1a1 107 PANTHER PTHR33169 1 94 6.2E-33 T 20-04-2016 APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 SMART SM00382 27 211 8.6E-19 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 PANTHER PTHR24220 4 259 1.6E-108 T 20-04-2016 APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 Gene3D G3DSA:3.40.50.300 3 234 2.0E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 Pfam PF00005 ABC transporter 18 161 1.8E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 SUPERFAMILY SSF50331 244 307 6.29E-5 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 SUPERFAMILY SSF52540 3 240 8.95E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 PANTHER PTHR24220:SF150 4 259 1.6E-108 T 20-04-2016 APRE_RS00265 7be5066c0ad163e8fb0c73a47c54c288 309 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 PANTHER PTHR10314:SF17 4 352 1.1E-161 T 20-04-2016 APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 29 394 5.5E-143 T 20-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 300 2.5E-86 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 Gene3D G3DSA:3.40.50.1100 66 318 1.7E-79 T 20-04-2016 APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 SUPERFAMILY SSF53686 5 349 9.04E-100 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 Gene3D G3DSA:3.30.70.260 321 388 8.3E-6 T 20-04-2016 APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 PANTHER PTHR10314 4 352 1.1E-161 T 20-04-2016 APRE_RS05420 915aedfb0136d5954f7cc24204ed5ae3 402 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 39 52 - T 20-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 PANTHER PTHR21342 1 159 2.7E-62 T 20-04-2016 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 157 2.2E-57 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 SUPERFAMILY SSF52374 2 155 6.17E-40 T 20-04-2016 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 Pfam PF01467 Cytidylyltransferase-like 4 134 2.4E-15 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 PANTHER PTHR21342:SF1 1 159 2.7E-62 T 20-04-2016 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 9.1E-35 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 9.1E-35 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 9.1E-35 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 9.1E-35 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 55 4.2E-17 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 Gene3D G3DSA:3.40.50.620 1 160 2.4E-48 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS05295 fab5ed9fad9b66dd83bf724ac6079aba 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 159 33.217 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 SUPERFAMILY SSF81333 87 153 7.98E-10 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 Gene3D G3DSA:1.20.120.610 2 154 2.8E-35 T 20-04-2016 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 104 130 2.4E-11 T 20-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 131 154 2.4E-11 T 20-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 29 53 2.4E-11 T 20-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 55 79 2.4E-11 T 20-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 PANTHER PTHR10263:SF5 1 152 5.7E-17 T 20-04-2016 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 Pfam PF00137 ATP synthase subunit C 16 75 4.2E-15 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 Pfam PF00137 ATP synthase subunit C 93 152 1.6E-12 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 SUPERFAMILY SSF81333 13 77 5.89E-11 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APRE_RS08650 dfb3e7b014c1e178a55c24b867bdfbef 156 PANTHER PTHR10263 1 152 5.7E-17 T 20-04-2016 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 Gene3D G3DSA:3.20.20.80 3 452 5.4E-134 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 SUPERFAMILY SSF51445 1 457 8.09E-151 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 402 419 1.7E-15 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 358 366 1.7E-15 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 381 392 1.7E-15 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 286 300 1.7E-15 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 426 438 1.7E-15 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PANTHER PTHR10353:SF73 1 457 5.7E-253 T 20-04-2016 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 Pfam PF00232 Glycosyl hydrolase family 1 3 456 1.7E-120 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS00780 2973fc13c9a86af2cb7563c05e94c421 457 PANTHER PTHR10353 1 457 5.7E-253 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 443 34.575 T 20-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 PANTHER PTHR11564 1 431 5.6E-248 T 20-04-2016 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 SMART SM00963 2 87 1.2E-34 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 SMART SM00382 100 300 1.7E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 426 1.7E-184 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Gene3D G3DSA:1.20.120.140 3 90 1.0E-34 T 20-04-2016 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 PANTHER PTHR11564:SF7 1 431 5.6E-248 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Gene3D G3DSA:1.10.260.30 327 428 6.6E-37 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 SUPERFAMILY SSF52540 43 353 1.39E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 SMART SM00962 101 295 1.9E-117 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Gene3D G3DSA:3.40.50.300 97 296 1.2E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 SUPERFAMILY SSF47446 327 427 1.28E-33 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 6.8E-78 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 5.0E-22 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APRE_RS06610 17ee078e81697b5af95960ba79b91141 445 Pfam PF02978 Signal peptide binding domain 327 424 8.8E-32 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 SUPERFAMILY SSF55307 206 320 2.75E-39 T 20-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 SMART SM00865 209 325 1.4E-47 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 SMART SM00864 15 207 4.4E-111 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 PANTHER PTHR30314 3 354 1.5E-181 T 20-04-2016 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 356 38.119 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 PANTHER PTHR30314:SF3 3 354 1.5E-181 T 20-04-2016 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 Gene3D G3DSA:3.30.1330.20 218 319 4.4E-44 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 ProSitePatterns PS01134 FtsZ protein signature 1. 46 80 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 SUPERFAMILY SSF52490 14 210 1.7E-71 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 PRINTS PR00423 Cell division protein FtsZ signature 100 120 2.2E-47 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 PRINTS PR00423 Cell division protein FtsZ signature 128 149 2.2E-47 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 PRINTS PR00423 Cell division protein FtsZ signature 191 213 2.2E-47 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 PRINTS PR00423 Cell division protein FtsZ signature 214 235 2.2E-47 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 175 7.1E-45 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 Gene3D G3DSA:3.40.50.1440 14 217 1.0E-93 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 Pfam PF12327 FtsZ family, C-terminal domain 224 317 2.7E-29 T 20-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APRE_RS06110 09d91c03ee5cc69fcdf61b89af5c7f65 362 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 331 1.8E-128 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 299 4.9E-117 T 20-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 SUPERFAMILY SSF53784 1 311 1.83E-110 T 20-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 Gene3D G3DSA:3.40.50.450 1 212 1.4E-71 T 20-04-2016 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PIRSF PIRSF000532 1 318 3.4E-111 T 20-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PANTHER PTHR13697 1 317 2.0E-122 T 20-04-2016 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PANTHER PTHR13697:SF4 1 317 2.0E-122 T 20-04-2016 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 20-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 3.9E-80 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 44.684 T 20-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS03525 a90e8cdc54ad8e5bf16307498ab981da 319 Pfam PF00365 Phosphofructokinase 4 275 4.8E-104 T 20-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Gene3D G3DSA:3.30.70.270 68 166 1.2E-26 T 20-04-2016 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 SUPERFAMILY SSF100879 244 341 3.34E-12 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 350 8.5E-9 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Gene3D G3DSA:1.10.150.20 168 238 2.1E-21 T 20-04-2016 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Hamap MF_01113 DNA polymerase IV [dinB]. 2 356 31.506 T 20-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 SUPERFAMILY SSF56672 3 236 3.38E-71 T 20-04-2016 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 PANTHER PTHR11076 4 346 2.0E-89 T 20-04-2016 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Gene3D G3DSA:3.30.1490.100 246 349 1.2E-9 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Pfam PF00817 impB/mucB/samB family 9 155 2.3E-41 T 20-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS01255 09533b92ee151fcb8c9de38575d86199 413 Pfam PF11798 IMS family HHH motif 169 199 1.6E-6 T 20-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS04010 c04374e10d2a388a68f2e5bf028c2ba4 337 Gene3D G3DSA:3.60.21.10 1 216 2.3E-34 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04010 c04374e10d2a388a68f2e5bf028c2ba4 337 SUPERFAMILY SSF56300 1 269 1.08E-36 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04010 c04374e10d2a388a68f2e5bf028c2ba4 337 PANTHER PTHR30337 1 202 9.0E-24 T 20-04-2016 APRE_RS04010 c04374e10d2a388a68f2e5bf028c2ba4 337 PANTHER PTHR30337:SF7 1 202 9.0E-24 T 20-04-2016 APRE_RS04010 c04374e10d2a388a68f2e5bf028c2ba4 337 Pfam PF00149 Calcineurin-like phosphoesterase 1 184 6.6E-13 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 57 3.3E-14 T 20-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 SUPERFAMILY SSF46785 3 57 4.68E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 64 129 1.9E-21 T 20-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 SUPERFAMILY SSF47979 63 132 8.11E-19 T 20-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 PANTHER PTHR33238 1 128 1.1E-28 T 20-04-2016 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 PANTHER PTHR33238:SF1 1 128 1.1E-28 T 20-04-2016 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 Gene3D G3DSA:1.10.60.10 71 132 3.3E-22 T 20-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 SMART SM00529 23 121 5.2E-26 T 20-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 APRE_RS03660 05dae727be092e308d7709e1ec4af861 134 Gene3D G3DSA:1.10.10.10 5 69 1.4E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 35 193 4.4E-11 T 20-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 228 496 3.5E-30 T 20-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 SUPERFAMILY SSF48179 310 525 1.46E-36 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 PANTHER PTHR30562:SF6 157 523 5.3E-83 T 20-04-2016 APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 PANTHER PTHR30562 157 523 5.3E-83 T 20-04-2016 APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 SUPERFAMILY SSF51735 19 304 1.54E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 Gene3D G3DSA:3.40.50.720 12 303 9.8E-69 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08210 ca3e6ca27f3f2d80d90ff2771b7348b7 526 Gene3D G3DSA:1.10.1040.10 308 525 1.5E-52 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 172 7.3E-44 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 PIRSF PIRSF006806 1 176 4.6E-38 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 PANTHER PTHR23407:SF1 1 175 5.0E-45 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 Gene3D G3DSA:3.40.50.10420 1 176 7.7E-47 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 SUPERFAMILY SSF100950 1 176 6.7E-43 T 20-04-2016 APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 172 9.5E-34 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APRE_RS06365 e701570f69535cc9585108d24e7cfc68 177 PANTHER PTHR23407 1 175 5.0E-45 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 PANTHER PTHR11780 40 494 3.1E-289 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 SUPERFAMILY SSF142984 281 364 1.26E-22 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 SMART SM00928 369 414 3.7E-21 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 478 489 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 508 519 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 SUPERFAMILY SSF140490 365 460 9.15E-35 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 Pfam PF12838 4Fe-4S dicluster domain 478 522 4.8E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 SUPERFAMILY SSF54862 476 524 3.45E-14 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 382 393 - T 20-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 88 259 1.6E-46 T 20-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 Gene3D G3DSA:3.30.70.20 475 524 1.7E-13 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 SUPERFAMILY SSF142019 41 280 7.59E-89 T 20-04-2016 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 370 454 4.6E-30 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APRE_RS05540 bda3d21116fa8f31df3a91e2fd108aa2 526 PANTHER PTHR11780:SF0 40 494 3.1E-289 T 20-04-2016 APRE_RS00485 402cb905f5da4f8501d89207a92f7c64 382 Pfam PF12710 haloacid dehalogenase-like hydrolase 219 326 6.7E-9 T 20-04-2016 APRE_RS00485 402cb905f5da4f8501d89207a92f7c64 382 Gene3D G3DSA:3.40.50.1000 220 330 5.5E-9 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00485 402cb905f5da4f8501d89207a92f7c64 382 SUPERFAMILY SSF56784 9 74 5.11E-22 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00485 402cb905f5da4f8501d89207a92f7c64 382 SUPERFAMILY SSF56784 134 144 5.11E-22 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00485 402cb905f5da4f8501d89207a92f7c64 382 SUPERFAMILY SSF56784 216 354 5.11E-22 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02145 2217f381576b67b6a6ef14b87121b8ae 75 PANTHER PTHR39341 16 74 8.6E-18 T 20-04-2016 APRE_RS02145 2217f381576b67b6a6ef14b87121b8ae 75 SUPERFAMILY SSF140683 14 75 3.79E-16 T 20-04-2016 APRE_RS02145 2217f381576b67b6a6ef14b87121b8ae 75 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 17 74 5.8E-26 T 20-04-2016 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide APRE_RS02145 2217f381576b67b6a6ef14b87121b8ae 75 Pfam PF08984 Domain of unknown function (DUF1858) 17 69 5.9E-19 T 20-04-2016 IPR015077 Domain of unknown function DUF1858 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 629 52.166 T 20-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 SUPERFAMILY SSF57783 568 606 2.55E-11 T 20-04-2016 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 SUPERFAMILY SSF56712 3 581 9.29E-186 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Pfam PF01131 DNA topoisomerase 127 540 4.1E-128 T 20-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PANTHER PTHR11390 1 677 4.7E-302 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Gene3D G3DSA:2.70.20.10 185 310 1.6E-30 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Gene3D G3DSA:2.70.20.10 316 449 6.9E-29 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Pfam PF01751 Toprim domain 5 113 2.4E-29 T 20-04-2016 IPR006171 Toprim domain APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 SMART SM00436 104 192 4.5E-48 T 20-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 604 1.1E-233 T 20-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 SMART SM00493 3 103 2.7E-29 T 20-04-2016 IPR006171 Toprim domain APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Gene3D G3DSA:3.30.65.10 573 616 2.5E-16 T 20-04-2016 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Gene3D G3DSA:1.10.460.10 450 572 2.3E-58 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Gene3D G3DSA:1.10.460.10 135 182 2.3E-58 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Gene3D G3DSA:3.40.50.140 3 134 1.0E-43 T 20-04-2016 IPR006171 Toprim domain APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 570 606 1.6E-15 T 20-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 609 648 5.5E-14 T 20-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 8.7E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 8.7E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 8.7E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 369 385 8.7E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 466 480 8.7E-33 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 SMART SM00437 242 503 8.7E-106 T 20-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 PANTHER PTHR11390:SF27 1 677 4.7E-302 T 20-04-2016 APRE_RS06540 da6a159efdf20b7128789dc89246d4e1 684 Pfam PF02150 RNA polymerases M/15 Kd subunit 653 682 3.0E-6 T 20-04-2016 IPR001529 DNA-directed RNA polymerase, M/15kDa subunit GO:0006351 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 PRINTS PR00046 Major sigma-70 factor signature 284 296 1.9E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 PRINTS PR00046 Major sigma-70 factor signature 158 166 1.9E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 PRINTS PR00046 Major sigma-70 factor signature 305 320 1.9E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 PRINTS PR00046 Major sigma-70 factor signature 134 147 1.9E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 PRINTS PR00046 Major sigma-70 factor signature 320 331 1.9E-22 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 PANTHER PTHR30603 89 338 9.8E-43 T 20-04-2016 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 305 331 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 SUPERFAMILY SSF88659 246 337 1.42E-22 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 Pfam PF04545 Sigma-70, region 4 280 333 1.4E-19 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 Pfam PF04542 Sigma-70 region 2 107 178 1.6E-15 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 Gene3D G3DSA:1.10.10.10 277 338 9.2E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 SUPERFAMILY SSF88946 87 179 2.35E-25 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 103 333 4.8E-30 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS08405 7846dc44c13fcca9647e0524cc161d6d 339 Gene3D G3DSA:1.10.601.10 12 175 4.9E-22 T 20-04-2016 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 SUPERFAMILY SSF53659 1 322 7.4E-84 T 20-04-2016 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 Pfam PF02504 Fatty acid synthesis protein 1 317 2.6E-93 T 20-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 PANTHER PTHR30100:SF1 1 323 4.3E-99 T 20-04-2016 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 322 3.1E-98 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 324 112.777 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 Gene3D G3DSA:3.40.718.10 1 323 1.3E-110 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 PANTHER PTHR30100 1 323 4.3E-99 T 20-04-2016 APRE_RS03430 f3f13e4d5be3574a26f06bfcc1b45e24 324 PIRSF PIRSF002465 1 324 1.9E-100 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APRE_RS06030 138fa1c02b57a7abc1d86cc88eef8617 337 SUPERFAMILY SSF52540 3 190 7.79E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06030 138fa1c02b57a7abc1d86cc88eef8617 337 SUPERFAMILY SSF48019 217 336 2.04E-16 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APRE_RS06030 138fa1c02b57a7abc1d86cc88eef8617 337 PANTHER PTHR34388 1 336 2.1E-27 T 20-04-2016 APRE_RS06030 138fa1c02b57a7abc1d86cc88eef8617 337 Gene3D G3DSA:3.40.50.300 3 101 2.4E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06030 138fa1c02b57a7abc1d86cc88eef8617 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 30 335 3.8E-32 T 20-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APRE_RS06030 138fa1c02b57a7abc1d86cc88eef8617 337 Pfam PF06144 DNA polymerase III, delta subunit 30 169 2.2E-15 T 20-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APRE_RS02090 4fa98283c23f22a6779358b271adc274 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 312 2.2E-39 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02090 4fa98283c23f22a6779358b271adc274 315 Gene3D G3DSA:1.10.3720.10 87 303 8.1E-22 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02090 4fa98283c23f22a6779358b271adc274 315 PANTHER PTHR30465 1 313 2.3E-109 T 20-04-2016 APRE_RS02090 4fa98283c23f22a6779358b271adc274 315 PANTHER PTHR30465:SF24 1 313 2.3E-109 T 20-04-2016 APRE_RS02090 4fa98283c23f22a6779358b271adc274 315 SUPERFAMILY SSF161098 90 299 3.27E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 Pfam PF03793 PASTA domain 361 422 2.1E-14 T 20-04-2016 IPR005543 PASTA domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 Pfam PF03793 PASTA domain 499 561 1.0E-13 T 20-04-2016 IPR005543 PASTA domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 Pfam PF03793 PASTA domain 427 489 1.4E-14 T 20-04-2016 IPR005543 PASTA domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 SUPERFAMILY SSF56112 4 270 2.97E-79 T 20-04-2016 IPR011009 Protein kinase-like domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 Gene3D G3DSA:1.10.510.10 112 310 5.4E-49 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 PANTHER PTHR24362 521 574 5.0E-99 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 PANTHER PTHR24362 1 311 5.0E-99 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 PANTHER PTHR24362 601 625 5.0E-99 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 20-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 SMART SM00220 10 276 2.9E-69 T 20-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 Pfam PF00069 Protein kinase domain 10 265 9.0E-57 T 20-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 Gene3D G3DSA:3.30.200.20 6 111 2.4E-29 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 SMART SM00740 356 423 7.9E-16 T 20-04-2016 IPR005543 PASTA domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 SMART SM00740 495 562 2.6E-15 T 20-04-2016 IPR005543 PASTA domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 SMART SM00740 424 490 8.8E-12 T 20-04-2016 IPR005543 PASTA domain APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 20-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 PANTHER PTHR24362:SF160 521 574 5.0E-99 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 PANTHER PTHR24362:SF160 1 311 5.0E-99 T 20-04-2016 APRE_RS03480 b4aaefc451269fd37444d2962a1831f9 652 PANTHER PTHR24362:SF160 601 625 5.0E-99 T 20-04-2016 APRE_RS06465 6f83ae835af5bbe28fb019ee1bae5c1d 477 Pfam PF02916 DNA polymerase processivity factor 82 179 6.1E-7 T 20-04-2016 IPR004190 DNA polymerase processivity factor GO:0006260 APRE_RS06465 6f83ae835af5bbe28fb019ee1bae5c1d 477 Gene3D G3DSA:3.40.190.10 106 181 7.3E-8 T 20-04-2016 APRE_RS06465 6f83ae835af5bbe28fb019ee1bae5c1d 477 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 243 388 1.2E-27 T 20-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APRE_RS06465 6f83ae835af5bbe28fb019ee1bae5c1d 477 SUPERFAMILY SSF53850 104 185 7.45E-6 T 20-04-2016 APRE_RS06465 6f83ae835af5bbe28fb019ee1bae5c1d 477 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 243 388 4.2E-38 T 20-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APRE_RS06465 6f83ae835af5bbe28fb019ee1bae5c1d 477 PANTHER PTHR33392 208 475 3.2E-41 T 20-04-2016 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 Gene3D G3DSA:2.30.40.10 368 439 2.7E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 Gene3D G3DSA:2.30.40.10 3 64 2.0E-20 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 SUPERFAMILY SSF51338 358 453 5.34E-27 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 Pfam PF01979 Amidohydrolase family 46 432 2.4E-30 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 SUPERFAMILY SSF51338 1 61 2.59E-12 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 SUPERFAMILY SSF51556 50 381 3.59E-93 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 PANTHER PTHR11647 1 453 7.0E-143 T 20-04-2016 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 PANTHER PTHR11647:SF1 1 453 7.0E-143 T 20-04-2016 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 Gene3D G3DSA:3.20.20.140 65 367 3.7E-99 T 20-04-2016 APRE_RS07345 1d6f10d3be770b7e0e427eb96da990e4 456 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 14 452 2.0E-146 T 20-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 APRE_RS00980 686f777038752609a003d4439f032393 288 SMART SM00382 28 216 8.1E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00980 686f777038752609a003d4439f032393 288 PANTHER PTHR24220:SF499 6 251 1.2E-70 T 20-04-2016 APRE_RS00980 686f777038752609a003d4439f032393 288 SUPERFAMILY SSF52540 3 224 3.04E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00980 686f777038752609a003d4439f032393 288 Pfam PF00005 ABC transporter 21 159 4.5E-23 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00980 686f777038752609a003d4439f032393 288 PANTHER PTHR24220 6 251 1.2E-70 T 20-04-2016 APRE_RS00980 686f777038752609a003d4439f032393 288 Gene3D G3DSA:3.40.50.300 4 223 9.7E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Pfam PF10371 Domain of unknown function 629 680 1.9E-16 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 PANTHER PTHR32154 5 1176 0.0 T 20-04-2016 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 609 5.4E-27 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 SUPERFAMILY SSF52922 261 413 3.85E-43 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 SUPERFAMILY SSF54862 671 832 7.53E-21 T 20-04-2016 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 963 1074 7.7E-9 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Gene3D G3DSA:4.10.780.10 632 670 3.5E-10 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 248 7.4E-71 T 20-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 SUPERFAMILY SSF52518 6 259 3.34E-70 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 8 1176 0.0 T 20-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Gene3D G3DSA:3.40.50.970 5 259 4.4E-101 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 PANTHER PTHR32154:SF0 5 1176 0.0 T 20-04-2016 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 SUPERFAMILY SSF52518 790 1176 7.07E-128 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 SMART SM00890 622 681 5.9E-16 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 375 9.0E-13 T 20-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Gene3D G3DSA:3.40.50.920 261 412 5.3E-58 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 PIRSF PIRSF000159 2 1178 0.0 T 20-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 747 758 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 691 702 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Gene3D G3DSA:3.40.50.970 791 1176 1.3E-144 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Gene3D G3DSA:3.40.920.10 417 625 5.2E-81 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 SUPERFAMILY SSF53323 418 661 6.15E-76 T 20-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Gene3D G3DSA:3.30.70.20 673 785 6.8E-21 T 20-04-2016 APRE_RS05425 80bba90f7cbfa05c29796fbbfa704a15 1178 Pfam PF13484 4Fe-4S double cluster binding domain 690 759 5.3E-11 T 20-04-2016 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 PANTHER PTHR22926 1 316 5.0E-114 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 1.3E-5 T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 PANTHER PTHR22926:SF5 1 316 5.0E-114 T 20-04-2016 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 316 4.9E-91 T 20-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 ProSitePatterns PS01348 MraY family signature 2. 165 176 - T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 Pfam PF00953 Glycosyl transferase family 4 77 241 6.6E-35 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06130 4b2a74ef1a3f797c691fa366d913451e 317 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 317 20.805 T 20-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS05090 2d142be376ae6dcbff862d90a7481d27 250 PANTHER PTHR23026 1 189 2.2E-48 T 20-04-2016 APRE_RS05090 2d142be376ae6dcbff862d90a7481d27 250 SUPERFAMILY SSF55469 1 247 7.98E-57 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS05090 2d142be376ae6dcbff862d90a7481d27 250 PIRSF PIRSF005426 1 248 2.3E-74 T 20-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 APRE_RS05090 2d142be376ae6dcbff862d90a7481d27 250 PANTHER PTHR23026:SF98 1 189 2.2E-48 T 20-04-2016 APRE_RS05090 2d142be376ae6dcbff862d90a7481d27 250 Gene3D G3DSA:3.40.109.10 1 247 4.7E-60 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS05090 2d142be376ae6dcbff862d90a7481d27 250 Pfam PF00881 Nitroreductase family 10 163 1.8E-16 T 20-04-2016 IPR029479 Nitroreductase APRE_RS00315 11ea4671ffbd13be9b0231ed61b82c04 291 PANTHER PTHR32243:SF7 17 291 1.2E-90 T 20-04-2016 APRE_RS00315 11ea4671ffbd13be9b0231ed61b82c04 291 SUPERFAMILY SSF161098 27 291 7.72E-63 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00315 11ea4671ffbd13be9b0231ed61b82c04 291 PANTHER PTHR32243 17 291 1.2E-90 T 20-04-2016 APRE_RS00315 11ea4671ffbd13be9b0231ed61b82c04 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 284 1.9E-15 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00315 11ea4671ffbd13be9b0231ed61b82c04 291 Gene3D G3DSA:1.10.3720.10 21 278 5.7E-59 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 SUPERFAMILY SSF53671 5 333 8.98E-83 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PANTHER PTHR11405 299 333 2.1E-112 T 20-04-2016 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PANTHER PTHR11405 1 279 2.1E-112 T 20-04-2016 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 Gene3D G3DSA:3.40.50.1370 5 144 2.3E-49 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 331 6.5E-40 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.2E-20 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 2.2E-20 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.2E-20 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 Gene3D G3DSA:3.40.50.1370 145 320 4.5E-53 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 5.0E-41 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 1.9E-20 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.9E-20 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.9E-20 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.9E-20 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.9E-20 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PANTHER PTHR11405:SF44 299 333 2.1E-112 T 20-04-2016 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 PANTHER PTHR11405:SF44 1 279 2.1E-112 T 20-04-2016 APRE_RS00205 b50ac7f62e480167ed02dd3991176768 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 2.8E-97 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 PANTHER PTHR30352:SF2 1 155 1.6E-45 T 20-04-2016 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 Gene3D G3DSA:3.20.20.70 24 126 9.1E-8 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 Pfam PF13353 4Fe-4S single cluster domain 12 148 8.9E-41 T 20-04-2016 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 PANTHER PTHR30352 1 155 1.6E-45 T 20-04-2016 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 3 151 1.7E-45 T 20-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 SUPERFAMILY SSF102114 22 95 3.53E-8 T 20-04-2016 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 20-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APRE_RS05110 0b163ccec6fda6b32cf235dad2e4d86a 166 PIRSF PIRSF000368 1 164 7.0E-51 T 20-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 SUPERFAMILY SSF48179 176 301 1.19E-33 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 Gene3D G3DSA:1.10.1040.10 185 302 1.1E-43 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 PANTHER PTHR21708 1 303 1.5E-65 T 20-04-2016 APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 301 1.5E-79 T 20-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 SUPERFAMILY SSF51735 1 133 5.47E-15 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 2.2E-34 T 20-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 PANTHER PTHR21708:SF24 1 303 1.5E-65 T 20-04-2016 APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 Gene3D G3DSA:3.40.50.720 1 184 1.8E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS00540 b6149a9ca8a5f5474b1c66a734399472 307 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 301 4.6E-37 T 20-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 SUPERFAMILY SSF46785 5 80 2.41E-9 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 Gene3D G3DSA:1.10.10.10 1 80 5.3E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 167 4.4E-51 T 20-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 PIRSF PIRSF019345 1 175 4.5E-48 T 20-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 PANTHER PTHR34298 1 168 2.7E-50 T 20-04-2016 APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 Gene3D G3DSA:1.10.10.10 83 158 6.3E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 168 1.1E-42 T 20-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 SUPERFAMILY SSF46785 85 158 4.33E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05230 be535ff52362f03589a66d3585ae5966 176 PANTHER PTHR34298:SF2 1 168 2.7E-50 T 20-04-2016 APRE_RS08005 1b5238af467efa55885abf9973f08297 61 Gene3D G3DSA:4.10.830.10 1 61 1.6E-28 T 20-04-2016 APRE_RS08005 1b5238af467efa55885abf9973f08297 61 PANTHER PTHR19836 10 61 1.0E-35 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08005 1b5238af467efa55885abf9973f08297 61 SUPERFAMILY SSF57716 4 61 1.14E-21 T 20-04-2016 APRE_RS08005 1b5238af467efa55885abf9973f08297 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.073 T 20-04-2016 IPR023053 Ribosomal protein S14, type Z APRE_RS08005 1b5238af467efa55885abf9973f08297 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 8.8E-26 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044:SF26 688 994 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044:SF26 1 140 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044:SF26 509 650 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044:SF26 406 491 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1022 260.573 T 20-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Pfam PF14579 Helix-hairpin-helix motif 929 1011 2.4E-12 T 20-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 603 815 5.3E-38 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 405 587 1.0E-41 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Gene3D G3DSA:3.20.20.140 208 375 2.3E-11 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Pfam PF00929 Exonuclease 7 161 1.5E-34 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 SUPERFAMILY SSF160975 959 1001 4.58E-5 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Gene3D G3DSA:1.20.5.140 145 177 4.3E-16 T 20-04-2016 IPR023223 DNA polymerase III/inhibitor IA3, alpha-helix domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 SMART SM00479 5 170 2.2E-45 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 2 1018 0.0 T 20-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Gene3D G3DSA:3.30.420.10 2 142 2.4E-44 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Gene3D G3DSA:1.10.150.280 954 1006 5.3E-9 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 Pfam PF02811 PHP domain 172 273 4.9E-13 T 20-04-2016 IPR004013 PHP domain GO:0003824 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 1 218 2.8E-32 T 20-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044 1 140 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044 688 994 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044 406 491 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 PANTHER PTHR23044 509 650 0.0 T 20-04-2016 APRE_RS03140 f6e2a48643a7a440b4f3c009c0f338e0 1022 SUPERFAMILY SSF53098 6 456 6.94E-86 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS07175 f2c1b3d71b79c7d78c07d1e8c984cc7f 265 SUPERFAMILY SSF53613 1 257 1.54E-77 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS07175 f2c1b3d71b79c7d78c07d1e8c984cc7f 265 Gene3D G3DSA:3.40.1190.20 2 256 4.6E-103 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS07175 f2c1b3d71b79c7d78c07d1e8c984cc7f 265 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 1.9E-94 T 20-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APRE_RS07175 f2c1b3d71b79c7d78c07d1e8c984cc7f 265 PANTHER PTHR20858 1 260 2.9E-118 T 20-04-2016 APRE_RS07175 f2c1b3d71b79c7d78c07d1e8c984cc7f 265 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 255 7.2E-104 T 20-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APRE_RS07175 f2c1b3d71b79c7d78c07d1e8c984cc7f 265 PANTHER PTHR20858:SF17 1 260 2.9E-118 T 20-04-2016 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 PANTHER PTHR24078 2 360 2.4E-136 T 20-04-2016 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Pfam PF00226 DnaJ domain 3 65 2.6E-26 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 PRINTS PR00625 DnaJ domain signature 5 23 5.5E-29 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 PRINTS PR00625 DnaJ domain signature 40 60 5.5E-29 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 PRINTS PR00625 DnaJ domain signature 60 79 5.5E-29 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 PRINTS PR00625 DnaJ domain signature 23 38 5.5E-29 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Gene3D G3DSA:1.10.287.110 1 98 1.3E-34 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Pfam PF01556 DnaJ C terminal domain 119 335 2.8E-38 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Gene3D G3DSA:2.60.260.20 258 336 7.7E-20 T 20-04-2016 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Gene3D G3DSA:2.60.260.20 215 255 3.7E-16 T 20-04-2016 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Gene3D G3DSA:2.60.260.20 113 154 3.7E-16 T 20-04-2016 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 SUPERFAMILY SSF49493 111 136 1.57E-15 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 SUPERFAMILY SSF49493 215 264 1.57E-15 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 PANTHER PTHR24078:SF190 2 360 2.4E-136 T 20-04-2016 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 20-04-2016 IPR018253 DnaJ domain, conserved site APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 SUPERFAMILY SSF46565 1 103 3.27E-33 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 351 1.1E-128 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Gene3D G3DSA:2.10.230.10 155 209 1.9E-15 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 SMART SM00271 2 60 2.6E-29 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 SUPERFAMILY SSF57938 132 211 4.19E-17 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 370 37.609 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 SUPERFAMILY SSF49493 261 346 2.75E-21 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APRE_RS05935 3140d867625f2bd977b50f008bc364ad 372 Pfam PF00684 DnaJ central domain 145 209 6.3E-13 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APRE_RS07035 5a3409ac4e95a7cdc6519110e15ccba3 576 Pfam PF00092 von Willebrand factor type A domain 388 567 5.5E-5 T 20-04-2016 IPR002035 von Willebrand factor, type A APRE_RS07035 5a3409ac4e95a7cdc6519110e15ccba3 576 Gene3D G3DSA:3.40.50.410 387 569 3.2E-8 T 20-04-2016 IPR002035 von Willebrand factor, type A APRE_RS07035 5a3409ac4e95a7cdc6519110e15ccba3 576 SUPERFAMILY SSF53300 386 568 2.43E-9 T 20-04-2016 IPR002035 von Willebrand factor, type A APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 PIRSF PIRSF000090 1 269 3.2E-83 T 20-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 Pfam PF01012 Electron transfer flavoprotein domain 23 213 1.9E-40 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 SUPERFAMILY SSF52402 1 263 4.05E-68 T 20-04-2016 APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 PANTHER PTHR21294 1 269 5.0E-98 T 20-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 SMART SM00893 22 218 4.6E-48 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 PANTHER PTHR21294:SF0 1 269 5.0E-98 T 20-04-2016 APRE_RS06945 8a8da0356c2d6dbb8f5ce56870499947 269 Gene3D G3DSA:3.40.50.620 1 268 7.3E-85 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS04380 0587e2bfa15deb542a12a9aff9798325 122 SUPERFAMILY SSF160719 21 103 4.05E-5 T 20-04-2016 APRE_RS04380 0587e2bfa15deb542a12a9aff9798325 122 Pfam PF10934 Protein of unknown function (DUF2634) 7 101 2.4E-9 T 20-04-2016 IPR020288 Protein of unknown function DUF2634 APRE_RS04380 0587e2bfa15deb542a12a9aff9798325 122 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 6 95 0.005 T 20-04-2016 IPR020288 Protein of unknown function DUF2634 APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 PANTHER PTHR21368 1 148 1.5E-39 T 20-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 Gene3D G3DSA:3.40.5.10 1 52 8.3E-23 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 SUPERFAMILY SSF55653 56 147 1.44E-23 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 Gene3D G3DSA:3.10.430.100 61 147 8.9E-26 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.6E-20 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 7.9E-39 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 5.7E-25 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.7 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02815 6877cfbd7e9ee8386e427047d4e2231b 149 SUPERFAMILY SSF55658 1 57 2.09E-17 T 20-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 SMART SM00382 32 222 6.0E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 PANTHER PTHR24220 4 241 4.1E-84 T 20-04-2016 APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 Gene3D G3DSA:3.40.50.300 2 236 2.3E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 Pfam PF00005 ABC transporter 23 172 3.0E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 277 3.2E-111 T 20-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 SUPERFAMILY SSF52540 3 235 1.13E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07285 bdaad413f07d9e0ac05772575528a856 287 PANTHER PTHR24220:SF66 4 241 4.1E-84 T 20-04-2016 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Pfam PF02811 PHP domain 7 178 2.0E-54 T 20-04-2016 IPR004013 PHP domain GO:0003824 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Gene3D G3DSA:3.20.20.140 4 255 1.6E-52 T 20-04-2016 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 PANTHER PTHR32294 1 1148 0.0 T 20-04-2016 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 PANTHER PTHR32294:SF0 1 1148 0.0 T 20-04-2016 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1034 0.0 T 20-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 297 715 1.7E-173 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 SUPERFAMILY SSF89550 5 268 5.69E-40 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Pfam PF01336 OB-fold nucleic acid binding domain 997 1071 4.2E-9 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Gene3D G3DSA:2.40.50.140 991 1075 2.8E-6 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Pfam PF14579 Helix-hairpin-helix motif 804 895 1.5E-28 T 20-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 Gene3D G3DSA:1.10.150.280 830 870 1.3E-5 T 20-04-2016 APRE_RS03520 7bbd489cb1484f1853a3d199ec31b599 1148 SMART SM00481 6 73 3.4E-31 T 20-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF54211 12 143 1.42E-40 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SMART SM00322 550 615 1.1E-10 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 317 2.1E-10 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Gene3D G3DSA:1.10.10.400 225 311 3.7E-20 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Gene3D G3DSA:2.40.50.140 617 693 2.8E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 13 689 5.3E-293 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SMART SM00316 618 688 7.5E-28 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF54791 550 627 1.52E-16 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF00013 KH domain 555 611 1.4E-8 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Gene3D G3DSA:3.30.230.70 312 541 7.8E-87 T 20-04-2016 IPR027408 PNPase/RNase PH domain APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Gene3D G3DSA:3.30.230.70 13 223 7.9E-67 T 20-04-2016 IPR027408 PNPase/RNase PH domain APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 691 28.92 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 PIRSF PIRSF005499 1 711 6.1E-281 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 8.7E-18 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF01138 3' exoribonuclease family, domain 1 320 454 2.6E-22 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF46915 238 318 1.96E-13 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF50249 606 693 3.08E-24 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 PANTHER PTHR11252:SF0 12 695 0.0 T 20-04-2016 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 PANTHER PTHR11252 12 695 0.0 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF55666 144 233 9.29E-23 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF55666 448 547 5.37E-28 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 SUPERFAMILY SSF54211 293 486 6.58E-49 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 3.1E-14 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF03725 3' exoribonuclease family, domain 2 458 525 8.7E-7 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Gene3D G3DSA:3.30.1370.10 549 616 3.7E-24 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APRE_RS03225 c29acc60812a6f15abbc563202c03467 711 Pfam PF00575 S1 RNA binding domain 617 688 1.8E-22 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 275 9.2E-84 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 SUPERFAMILY SSF52540 7 213 2.24E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 PANTHER PTHR11649 3 293 1.6E-104 T 20-04-2016 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 164 3.6E-25 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 SUPERFAMILY SSF54814 177 293 2.81E-41 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 Gene3D G3DSA:3.30.300.20 184 287 2.8E-41 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 Gene3D G3DSA:3.40.50.300 4 167 1.1E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 PANTHER PTHR11649:SF3 3 293 1.6E-104 T 20-04-2016 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 Pfam PF07650 KH domain 203 281 1.9E-21 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 Pfam PF01926 50S ribosome-binding GTPase 7 121 7.8E-23 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS01800 5178c4384de942c6984b2ff457a5883a 293 Hamap MF_00367 GTPase Era [era]. 2 292 35.038 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 3 393 1.7E-95 T 20-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 Gene3D G3DSA:3.50.50.60 342 397 3.6E-36 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 Gene3D G3DSA:3.50.50.60 1 179 3.6E-36 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 PANTHER PTHR10617:SF103 336 393 1.5E-54 T 20-04-2016 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 PANTHER PTHR10617:SF103 1 292 1.5E-54 T 20-04-2016 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 SUPERFAMILY SSF160996 191 343 3.66E-30 T 20-04-2016 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 Gene3D G3DSA:2.40.30.10 192 272 2.8E-6 T 20-04-2016 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 SUPERFAMILY SSF51905 1 181 3.96E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 SUPERFAMILY SSF51905 340 397 3.96E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 PANTHER PTHR10617 336 393 1.5E-54 T 20-04-2016 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 PANTHER PTHR10617 1 292 1.5E-54 T 20-04-2016 APRE_RS07725 eb49e97fbf11b791f0381a40dd3b85be 402 Pfam PF03486 HI0933-like protein 2 394 1.7E-87 T 20-04-2016 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 PANTHER PTHR30307 2 339 5.9E-176 T 20-04-2016 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 Gene3D G3DSA:3.40.1780.10 1 62 7.2E-103 T 20-04-2016 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 Gene3D G3DSA:3.40.1780.10 177 339 7.2E-103 T 20-04-2016 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 Pfam PF02547 Queuosine biosynthesis protein 4 339 9.4E-144 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 339 3.0E-139 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 Gene3D G3DSA:2.40.10.240 64 143 6.2E-29 T 20-04-2016 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 340 46.176 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 SUPERFAMILY SSF111337 1 339 1.83E-140 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04635 c0005b9e3f20bd6d89a11907f8f2a637 340 PANTHER PTHR30307:SF0 2 339 5.9E-176 T 20-04-2016 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 SUPERFAMILY SSF46992 3 86 1.96E-24 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 Pfam PF01649 Ribosomal protein S20 2 84 8.0E-24 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 PANTHER PTHR33398 1 86 1.8E-24 T 20-04-2016 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 88 4.0E-11 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.177 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 8.5E-22 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06025 5f063fe9e828986af82402bb188c6266 88 Gene3D G3DSA:1.20.58.110 1 86 2.0E-27 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 PANTHER PTHR12725 2 227 1.5E-34 T 20-04-2016 APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 Gene3D G3DSA:3.40.50.1000 93 227 7.4E-38 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 227 6.2E-58 T 20-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 199 3.6E-20 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 Gene3D G3DSA:1.10.150.240 15 92 5.0E-18 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 SUPERFAMILY SSF56784 2 227 5.05E-43 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 194 7.8E-10 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS05460 f838b3d7ad78ab49996d43a7a42dbeb2 227 PANTHER PTHR12725:SF57 2 227 1.5E-34 T 20-04-2016 APRE_RS07200 de78f95ef1436e97a9686b5388f0baa1 199 PANTHER PTHR14119 21 196 6.6E-51 T 20-04-2016 APRE_RS07200 de78f95ef1436e97a9686b5388f0baa1 199 SUPERFAMILY SSF52499 20 197 2.09E-41 T 20-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APRE_RS07200 de78f95ef1436e97a9686b5388f0baa1 199 Pfam PF00857 Isochorismatase family 25 173 1.5E-26 T 20-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APRE_RS07200 de78f95ef1436e97a9686b5388f0baa1 199 Gene3D G3DSA:3.40.50.850 21 197 4.7E-50 T 20-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 PANTHER PTHR21581 1 389 8.4E-68 T 20-04-2016 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 Gene3D G3DSA:2.60.410.10 292 378 1.4E-11 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 271 1.9E-52 T 20-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 SUPERFAMILY SSF56601 5 287 1.03E-56 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 Gene3D G3DSA:3.40.710.10 14 287 4.8E-75 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 293 378 3.7E-10 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 SMART SM00936 291 378 5.3E-11 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 SUPERFAMILY SSF69189 292 380 4.9E-9 T 20-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 1.8E-14 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.8E-14 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 1.8E-14 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APRE_RS06520 897d52fac7f3f9a8df6eeabfcea721a8 403 PANTHER PTHR21581:SF11 1 389 8.4E-68 T 20-04-2016 APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 Gene3D G3DSA:3.90.1530.10 23 118 2.6E-32 T 20-04-2016 APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 SMART SM00470 26 113 1.8E-31 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 SUPERFAMILY SSF110849 26 115 1.1E-24 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 PANTHER PTHR33375 5 271 1.8E-74 T 20-04-2016 APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 Pfam PF02195 ParB-like nuclease domain 27 113 1.8E-23 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 PANTHER PTHR33375:SF3 5 271 1.8E-74 T 20-04-2016 APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 SUPERFAMILY SSF109709 107 214 2.88E-31 T 20-04-2016 APRE_RS08815 39412bd595779ecd70d786719e545a8b 280 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 193 1.2E-50 T 20-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 SMART SM00382 211 394 0.0025 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 SUPERFAMILY SSF52540 189 501 1.89E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 PANTHER PTHR32039 1 503 8.1E-228 T 20-04-2016 APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 397 7.7E-91 T 20-04-2016 IPR000523 Magnesium chelatase ChlI domain APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 141 3.6E-45 T 20-04-2016 APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 Gene3D G3DSA:3.30.230.10 5 166 3.1E-35 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 500 3.1E-179 T 20-04-2016 IPR004482 Mg chelatase-related protein APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 319 332 5.4E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 5.4E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 291 305 5.4E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 SUPERFAMILY SSF54211 8 167 4.17E-37 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 Gene3D G3DSA:3.40.50.300 189 389 1.8E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 500 6.3E-26 T 20-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APRE_RS03070 73a989faaaece31646591658a63f4ee7 509 PANTHER PTHR32039:SF7 1 503 8.1E-228 T 20-04-2016 IPR004482 Mg chelatase-related protein APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 PANTHER PTHR11804 140 591 5.5E-107 T 20-04-2016 APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 PANTHER PTHR11804:SF8 140 591 5.5E-107 T 20-04-2016 APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 Pfam PF01432 Peptidase family M3 198 578 3.1E-69 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 Gene3D G3DSA:3.40.390.10 367 418 1.2E-4 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 Gene3D G3DSA:1.10.287.830 179 221 3.7E-8 T 20-04-2016 APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 3 589 1.4E-184 T 20-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 Pfam PF08439 Oligopeptidase F 110 178 2.0E-20 T 20-04-2016 IPR013647 Oligopeptidase F, N-terminal domain APRE_RS00290 18d6025afdfefc89bf5f3c5b534b757d 592 SUPERFAMILY SSF55486 9 571 8.18E-117 T 20-04-2016 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 PANTHER PTHR23115 1 596 3.8E-254 T 20-04-2016 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 SMART SM00838 402 487 0.0068 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 PANTHER PTHR23115:SF14 1 596 3.8E-254 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Gene3D G3DSA:3.40.50.300 2 206 2.8E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Pfam PF00679 Elongation factor G C-terminus 401 484 5.0E-23 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Gene3D G3DSA:3.30.70.870 307 404 9.0E-36 T 20-04-2016 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 3.7E-55 T 20-04-2016 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Gene3D G3DSA:3.30.70.240 405 485 6.3E-31 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Gene3D G3DSA:2.40.50.250 486 580 2.1E-35 T 20-04-2016 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.2E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.2E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 PRINTS PR00315 GTP-binding elongation factor signature 72 82 2.2E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 PRINTS PR00315 GTP-binding elongation factor signature 124 133 2.2E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 144 1.2E-21 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Pfam PF14492 Elongation Factor G, domain II 332 383 1.2E-6 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 SUPERFAMILY SSF54980 402 516 3.36E-27 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 SUPERFAMILY SSF50447 183 303 3.53E-25 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Pfam PF03144 Elongation factor Tu domain 2 220 291 2.2E-10 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 SUPERFAMILY SSF54980 306 390 3.96E-16 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 600 1.2E-262 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 SUPERFAMILY SSF52540 2 206 3.8E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07545 0893de7c35d6f6f01997761ab1eed7c0 607 Gene3D G3DSA:2.40.30.10 207 306 5.9E-24 T 20-04-2016 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 SUPERFAMILY SSF52540 328 565 6.66E-86 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 Gene3D G3DSA:1.20.1560.10 5 313 1.1E-40 T 20-04-2016 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 Gene3D G3DSA:3.40.50.300 331 560 3.5E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 Pfam PF00664 ABC transporter transmembrane region 16 282 7.0E-20 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 PANTHER PTHR24222 1 565 1.7E-179 T 20-04-2016 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 SUPERFAMILY SSF90123 5 313 8.24E-49 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 Pfam PF00005 ABC transporter 348 496 6.8E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 SMART SM00382 356 542 4.9E-16 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03595 8d6a9bcc00660737f6c0a500dac98d04 573 PANTHER PTHR24222:SF24 1 565 1.7E-179 T 20-04-2016 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PANTHER PTHR23402 1 211 1.3E-64 T 20-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APRE_RS06275 04fcf83954517a726905c39282eaac29 214 Pfam PF01470 Pyroglutamyl peptidase 1 200 7.8E-89 T 20-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APRE_RS06275 04fcf83954517a726905c39282eaac29 214 Gene3D G3DSA:3.40.630.20 1 204 8.9E-70 T 20-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APRE_RS06275 04fcf83954517a726905c39282eaac29 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PANTHER PTHR23402:SF1 1 211 1.3E-64 T 20-04-2016 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 198 38.15 T 20-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PIRSF PIRSF015592 1 212 1.4E-84 T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 SUPERFAMILY SSF53182 1 205 1.96E-69 T 20-04-2016 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 2.3E-47 T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 2.3E-47 T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 159 171 2.3E-47 T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 2.3E-47 T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 2.3E-47 T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 202 1.5E-76 T 20-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 APRE_RS06275 04fcf83954517a726905c39282eaac29 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 20-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 Pfam PF02678 Pirin 25 120 1.0E-27 T 20-04-2016 IPR003829 Pirin, N-terminal domain APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 SUPERFAMILY SSF51182 5 274 6.3E-68 T 20-04-2016 IPR011051 RmlC-like cupin domain APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 Pfam PF05726 Pirin C-terminal cupin domain 173 274 2.9E-20 T 20-04-2016 IPR008778 Pirin, C-terminal domain APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 PANTHER PTHR13903:SF8 4 273 3.5E-78 T 20-04-2016 APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 Gene3D G3DSA:2.60.120.10 4 247 2.9E-67 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 PANTHER PTHR13903 4 273 3.5E-78 T 20-04-2016 IPR012093 Pirin APRE_RS08590 a8ca97312ebaa162d83c81e0503b2b97 282 PIRSF PIRSF006232 2 279 3.2E-71 T 20-04-2016 IPR012093 Pirin APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 PANTHER PTHR12592 1 217 1.8E-37 T 20-04-2016 APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 210 22.727 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 Gene3D G3DSA:3.40.50.10260 2 215 3.1E-49 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 PANTHER PTHR12592:SF0 1 217 1.8E-37 T 20-04-2016 APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 3 211 3.7E-37 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 Pfam PF03853 YjeF-related protein N-terminus 27 191 1.3E-34 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APRE_RS02840 2f988569a984128ff20dc4ed58356aa5 218 SUPERFAMILY SSF64153 1 215 7.98E-46 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 SUPERFAMILY SSF50985 143 302 3.92E-25 T 20-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 SUPERFAMILY SSF161098 442 639 2.35E-24 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 SUPERFAMILY SSF50985 291 429 9.42E-18 T 20-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 193 221 8.8E-7 T 20-04-2016 APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 PANTHER PTHR30465 430 657 9.6E-97 T 20-04-2016 APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 Gene3D G3DSA:2.130.10.30 144 426 8.9E-38 T 20-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 PANTHER PTHR30465:SF2 430 657 9.6E-97 T 20-04-2016 APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 465 655 1.9E-30 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 79 125 2.3E-6 T 20-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APRE_RS00085 b915dcef47ccf9e264eb96cfa734d068 658 Gene3D G3DSA:1.10.3720.10 440 653 5.5E-30 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00505 427ad6dab9343069dc55d327c8e640f7 291 Pfam PF03313 Serine dehydratase alpha chain 16 275 2.2E-66 T 20-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APRE_RS00505 427ad6dab9343069dc55d327c8e640f7 291 PANTHER PTHR30182 5 289 5.2E-93 T 20-04-2016 APRE_RS00505 427ad6dab9343069dc55d327c8e640f7 291 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 290 2.6E-92 T 20-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 Gene3D G3DSA:3.90.1310.10 492 613 1.9E-29 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 SUPERFAMILY SSF56519 480 614 1.96E-26 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 Gene3D G3DSA:3.40.710.10 932 1094 2.0E-90 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 Gene3D G3DSA:3.40.710.10 614 839 2.0E-90 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627:SF2 935 1128 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627:SF2 2 101 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 SUPERFAMILY SSF56519 46 151 3.66E-9 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 Pfam PF00905 Penicillin binding protein transpeptidase domain 659 1087 5.0E-47 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 Pfam PF03717 Penicillin-binding Protein dimerisation domain 54 599 6.8E-35 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 SUPERFAMILY SSF56601 711 829 3.9E-65 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 SUPERFAMILY SSF56601 941 1093 3.9E-65 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 SUPERFAMILY SSF56601 566 683 3.9E-65 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627 935 1128 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627 656 847 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627 465 636 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627 2 101 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 ProSitePatterns PS00337 Beta-lactamase class-D active site. 722 732 - T 20-04-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627:SF2 656 847 3.5E-120 T 20-04-2016 APRE_RS06670 b2e1f1789b27ce509f309c6075af6eca 1150 PANTHER PTHR30627:SF2 465 636 3.5E-120 T 20-04-2016 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 20-04-2016 IPR014762 DNA mismatch repair, conserved site APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 Gene3D G3DSA:3.30.565.10 2 201 7.0E-68 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 SUPERFAMILY SSF54211 190 325 1.67E-29 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 323 1.7E-32 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 SUPERFAMILY SSF118116 429 612 7.06E-28 T 20-04-2016 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 305 2.1E-89 T 20-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 SUPERFAMILY SSF55874 4 212 7.07E-50 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 Gene3D G3DSA:3.30.230.10 202 323 1.6E-32 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 Pfam PF08676 MutL C terminal dimerisation domain 435 566 8.4E-20 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 SMART SM01340 208 326 1.2E-40 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 131 6.9E-13 T 20-04-2016 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 610 21.289 T 20-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 PANTHER PTHR10073 4 405 4.7E-112 T 20-04-2016 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 PANTHER PTHR10073 603 611 4.7E-112 T 20-04-2016 APRE_RS04850 648b945e4f77b82675b537cf57adfa2e 612 SMART SM00853 432 570 2.9E-11 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APRE_RS00640 e59ba0b64ba44d1f33451053c1dfec09 193 PANTHER PTHR38430 2 45 6.3E-12 T 20-04-2016 APRE_RS00640 e59ba0b64ba44d1f33451053c1dfec09 193 PANTHER PTHR38430 65 190 6.3E-12 T 20-04-2016 APRE_RS00640 e59ba0b64ba44d1f33451053c1dfec09 193 PIRSF PIRSF015034 1 193 2.9E-19 T 20-04-2016 IPR025542 YacH protein APRE_RS03870 2824291375822518cc32df390e7073f8 572 Pfam PF03129 Anticodon binding domain 475 562 1.5E-18 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS03870 2824291375822518cc32df390e7073f8 572 PANTHER PTHR11451:SF3 396 567 8.7E-131 T 20-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PANTHER PTHR11451:SF3 4 244 8.7E-131 T 20-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 36.667 T 20-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 SUPERFAMILY SSF55826 219 384 6.93E-28 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 Gene3D G3DSA:3.30.930.10 10 234 2.7E-95 T 20-04-2016 APRE_RS03870 2824291375822518cc32df390e7073f8 572 Gene3D G3DSA:3.30.930.10 386 467 2.7E-95 T 20-04-2016 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.8E-12 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.8E-12 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.8E-12 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.8E-12 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 561 2.3E-195 T 20-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 Gene3D G3DSA:3.90.960.10 251 384 3.6E-29 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PANTHER PTHR11451 396 567 8.7E-131 T 20-04-2016 APRE_RS03870 2824291375822518cc32df390e7073f8 572 PANTHER PTHR11451 4 244 8.7E-131 T 20-04-2016 APRE_RS03870 2824291375822518cc32df390e7073f8 572 SUPERFAMILY SSF55681 9 237 1.44E-91 T 20-04-2016 APRE_RS03870 2824291375822518cc32df390e7073f8 572 SUPERFAMILY SSF55681 404 475 1.44E-91 T 20-04-2016 APRE_RS03870 2824291375822518cc32df390e7073f8 572 SUPERFAMILY SSF52954 460 566 1.81E-28 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS03870 2824291375822518cc32df390e7073f8 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 371 1.8E-23 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APRE_RS03870 2824291375822518cc32df390e7073f8 572 Gene3D G3DSA:3.40.50.800 468 568 4.1E-28 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS03870 2824291375822518cc32df390e7073f8 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 456 9.8E-45 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 Pfam PF04545 Sigma-70, region 4 203 246 2.2E-15 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 Pfam PF04539 Sigma-70 region 3 114 169 6.4E-9 T 20-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 SUPERFAMILY SSF88946 10 101 5.81E-28 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 SUPERFAMILY SSF88659 105 173 1.61E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 PANTHER PTHR30385:SF4 19 253 6.0E-64 T 20-04-2016 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 SUPERFAMILY SSF88659 189 251 3.18E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 Gene3D G3DSA:1.10.601.10 24 99 1.1E-20 T 20-04-2016 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 247 4.5E-30 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 PANTHER PTHR30385 19 253 6.0E-64 T 20-04-2016 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 Gene3D G3DSA:1.10.10.10 100 154 1.6E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 PRINTS PR00046 Major sigma-70 factor signature 204 216 1.2E-7 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 PRINTS PR00046 Major sigma-70 factor signature 56 69 1.2E-7 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 PRINTS PR00046 Major sigma-70 factor signature 221 236 1.2E-7 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 PRINTS PR00046 Major sigma-70 factor signature 236 247 1.2E-7 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 Gene3D G3DSA:1.10.10.10 195 247 2.1E-7 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 Pfam PF04542 Sigma-70 region 2 45 101 1.2E-13 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00045 2b50407f437d1e123904caf92c04c3eb 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 27 247 1.0E-73 T 20-04-2016 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS07620 4bc77d766a83b6bd47984aa4040f6609 292 TIGRFAM TIGR01076 sortase_fam: sortase 103 230 2.0E-32 T 20-04-2016 IPR005754 Sortase family APRE_RS07620 4bc77d766a83b6bd47984aa4040f6609 292 Gene3D G3DSA:2.40.260.10 96 232 1.1E-31 T 20-04-2016 IPR023365 Sortase domain APRE_RS07620 4bc77d766a83b6bd47984aa4040f6609 292 SUPERFAMILY SSF63817 92 231 1.15E-29 T 20-04-2016 IPR023365 Sortase domain APRE_RS07620 4bc77d766a83b6bd47984aa4040f6609 292 Pfam PF04203 Sortase family 105 227 6.6E-18 T 20-04-2016 IPR005754 Sortase family APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 453 4.4E-82 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 Gene3D G3DSA:3.90.76.10 86 163 9.5E-17 T 20-04-2016 APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 Gene3D G3DSA:3.40.190.10 164 303 3.5E-35 T 20-04-2016 APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 95 117 - T 20-04-2016 IPR023765 Solute-binding protein family 5, conserved site APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 PIRSF PIRSF002741 1 541 9.2E-83 T 20-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 Gene3D G3DSA:3.10.105.10 304 512 5.4E-42 T 20-04-2016 APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 SUPERFAMILY SSF53850 47 535 1.93E-99 T 20-04-2016 APRE_RS03590 743c0a05d85324c8994dcc48bbfd0b98 544 PANTHER PTHR30290 1 540 3.4E-92 T 20-04-2016 APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 SUPERFAMILY SSF51735 1 64 2.19E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 SUPERFAMILY SSF51735 94 215 2.19E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 Gene3D G3DSA:3.40.50.720 1 219 3.5E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 218 316 3.6E-14 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 PANTHER PTHR23309 75 317 1.3E-57 T 20-04-2016 APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 PANTHER PTHR23309 1 41 1.3E-57 T 20-04-2016 APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 SUPERFAMILY SSF48179 217 316 1.87E-17 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 Gene3D G3DSA:1.10.1040.10 220 317 1.3E-18 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS05985 5a7821465421a8ffc2eb3d3ea72d65e5 317 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 213 2.0E-39 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 PANTHER PTHR10000:SF16 5 272 1.7E-50 T 20-04-2016 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 238 1.4E-23 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 Gene3D G3DSA:3.40.50.1000 1 78 6.1E-48 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 Gene3D G3DSA:3.40.50.1000 185 270 6.1E-48 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 PANTHER PTHR10000 5 272 1.7E-50 T 20-04-2016 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 Gene3D G3DSA:3.30.1240.10 90 184 2.3E-11 T 20-04-2016 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 SUPERFAMILY SSF56784 2 269 1.65E-60 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 265 3.9E-47 T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 219 241 - T 20-04-2016 APRE_RS01290 20964f3a3e55eed4ccbbade758bf4459 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 265 5.9E-53 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 Pfam PF02080 TrkA-C domain 150 215 1.7E-12 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 SUPERFAMILY SSF116726 136 215 9.29E-18 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 Gene3D G3DSA:3.30.70.1450 147 215 6.5E-18 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 SUPERFAMILY SSF51735 3 133 1.97E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 Gene3D G3DSA:3.40.50.720 1 138 4.1E-35 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 Pfam PF02254 TrkA-N domain 5 120 7.1E-26 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APRE_RS00625 03724f2db4316a860170a9c7211e1bfa 217 PANTHER PTHR16254 1 159 2.7E-42 T 20-04-2016 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 20-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PANTHER PTHR11540:SF3 2 305 1.0E-90 T 20-04-2016 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 SUPERFAMILY SSF51735 3 146 1.72E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 4 310 36.784 T 20-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 SUPERFAMILY SSF56327 145 305 1.73E-47 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 305 1.2E-26 T 20-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 Gene3D G3DSA:3.90.110.10 148 305 7.3E-49 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 1.7E-34 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 1.7E-34 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 1.7E-34 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 1.7E-34 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 1.7E-34 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PANTHER PTHR11540 2 305 1.0E-90 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 PIRSF PIRSF000102 1 314 3.5E-89 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 Gene3D G3DSA:3.40.50.720 5 147 6.9E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 144 4.8E-29 T 20-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APRE_RS06265 fcb8a9f01157d9c83392529b6a4375e1 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 9 304 2.6E-97 T 20-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APRE_RS01055 e1b306a2e81972da49962e371606a328 283 Pfam PF00924 Mechanosensitive ion channel 73 271 8.3E-47 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APRE_RS01055 e1b306a2e81972da49962e371606a328 283 SUPERFAMILY SSF50182 115 176 4.9E-15 T 20-04-2016 IPR010920 LSM domain APRE_RS01055 e1b306a2e81972da49962e371606a328 283 SUPERFAMILY SSF82861 21 113 1.07E-13 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APRE_RS01055 e1b306a2e81972da49962e371606a328 283 Gene3D G3DSA:2.30.30.60 131 176 1.5E-16 T 20-04-2016 APRE_RS01055 e1b306a2e81972da49962e371606a328 283 SUPERFAMILY SSF82689 179 271 3.27E-9 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APRE_RS01055 e1b306a2e81972da49962e371606a328 283 PANTHER PTHR30460 13 271 2.8E-58 T 20-04-2016 APRE_RS01055 e1b306a2e81972da49962e371606a328 283 Gene3D G3DSA:3.30.70.100 180 270 2.8E-7 T 20-04-2016 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 Pfam PF01479 S4 domain 352 393 1.1E-6 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 10 414 3.3E-125 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 PANTHER PTHR11766 9 416 5.2E-162 T 20-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 SUPERFAMILY SSF52374 11 329 1.59E-88 T 20-04-2016 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 Pfam PF00579 tRNA synthetases class I (W and Y) 37 329 1.6E-72 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 Gene3D G3DSA:3.10.290.10 323 415 2.8E-29 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 10 415 40.146 T 20-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 SUPERFAMILY SSF55174 334 414 3.4E-15 T 20-04-2016 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 169 184 2.8E-22 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 190 212 2.8E-22 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 52 74 2.8E-22 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 223 235 2.8E-22 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 SMART SM00363 350 416 7.8E-4 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 Gene3D G3DSA:1.10.240.10 240 322 1.5E-37 T 20-04-2016 APRE_RS07770 6255f9a55c1597c6b66b368b434bb752 416 Gene3D G3DSA:3.40.50.620 6 239 1.1E-89 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS02070 bb12bd4a70acb0a09220914c941dda49 312 PANTHER PTHR12277 72 312 2.1E-25 T 20-04-2016 APRE_RS02070 bb12bd4a70acb0a09220914c941dda49 312 SUPERFAMILY SSF53474 62 312 2.14E-39 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS02070 bb12bd4a70acb0a09220914c941dda49 312 Pfam PF00561 alpha/beta hydrolase fold 93 196 5.8E-11 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APRE_RS02070 bb12bd4a70acb0a09220914c941dda49 312 Gene3D G3DSA:3.40.50.1820 44 312 2.4E-35 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 Gene3D G3DSA:1.20.140.10 222 375 9.2E-66 T 20-04-2016 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 PANTHER PTHR10909:SF305 1 374 1.7E-175 T 20-04-2016 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 Gene3D G3DSA:2.40.110.10 122 221 1.4E-39 T 20-04-2016 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 PIRSF PIRSF016578 6 368 2.5E-23 T 20-04-2016 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 Gene3D G3DSA:1.10.540.10 3 118 4.1E-45 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 373 1.6E-42 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 SUPERFAMILY SSF47203 227 377 3.06E-51 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 3.7E-37 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 SUPERFAMILY SSF56645 3 242 2.36E-87 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.1E-25 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APRE_RS02670 38ba57f48db995404ca7321b245d0196 377 PANTHER PTHR10909 1 374 1.7E-175 T 20-04-2016 APRE_RS05465 ca134ec2244a423c5619d10db8365a68 210 Gene3D G3DSA:3.90.950.10 17 206 4.4E-44 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APRE_RS05465 ca134ec2244a423c5619d10db8365a68 210 Pfam PF02545 Maf-like protein 19 206 2.0E-35 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APRE_RS05465 ca134ec2244a423c5619d10db8365a68 210 PIRSF PIRSF006305 11 208 1.0E-35 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APRE_RS05465 ca134ec2244a423c5619d10db8365a68 210 SUPERFAMILY SSF52972 17 207 4.64E-39 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APRE_RS00895 ce794ff022233291014772e7e0b43019 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 20-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00895 ce794ff022233291014772e7e0b43019 234 Gene3D G3DSA:3.90.550.10 7 230 2.9E-66 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS00895 ce794ff022233291014772e7e0b43019 234 PANTHER PTHR32125:SF4 7 232 7.0E-55 T 20-04-2016 APRE_RS00895 ce794ff022233291014772e7e0b43019 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 231 25.184 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00895 ce794ff022233291014772e7e0b43019 234 SUPERFAMILY SSF53448 7 229 2.25E-49 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS00895 ce794ff022233291014772e7e0b43019 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 227 1.0E-57 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00895 ce794ff022233291014772e7e0b43019 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 230 7.0E-54 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS00895 ce794ff022233291014772e7e0b43019 234 PANTHER PTHR32125 7 232 7.0E-55 T 20-04-2016 APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 280 1.1E-69 T 20-04-2016 IPR003797 DegV APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 Gene3D G3DSA:3.30.1180.10 151 282 1.9E-30 T 20-04-2016 APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 1.1E-71 T 20-04-2016 IPR003797 DegV APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 PANTHER PTHR33434 1 280 6.7E-47 T 20-04-2016 APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 PANTHER PTHR33434:SF2 1 280 6.7E-47 T 20-04-2016 APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 SUPERFAMILY SSF82549 1 281 6.02E-70 T 20-04-2016 APRE_RS06900 c09b7fc2c72baf413b0bba22c0bb747f 285 Gene3D G3DSA:3.40.50.10170 3 149 3.5E-39 T 20-04-2016 APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 Pfam PF00294 pfkB family carbohydrate kinase 8 278 1.2E-52 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 240 253 - T 20-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 PANTHER PTHR10584 1 297 4.3E-96 T 20-04-2016 APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 SUPERFAMILY SSF53613 1 281 9.82E-63 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 298 1.5E-104 T 20-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 Gene3D G3DSA:3.40.1190.20 32 299 1.6E-78 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 PANTHER PTHR10584:SF170 1 297 4.3E-96 T 20-04-2016 APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 298 9.6E-105 T 20-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APRE_RS02060 799d71dc991865d3a3841b3c34f651f9 302 PIRSF PIRSF000535 1 300 6.3E-86 T 20-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 35 161 5.2E-48 T 20-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 SUPERFAMILY SSF51735 182 422 1.12E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS00960 3643e8c9684810cd397898a42e395674 423 PIRSF PIRSF000185 2 423 1.8E-133 T 20-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 PANTHER PTHR11606 20 421 9.5E-140 T 20-04-2016 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 349 360 1.4E-29 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 1.4E-29 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 92 106 1.4E-29 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 1.4E-29 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 SMART SM00839 184 421 4.4E-78 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 421 6.7E-59 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 Gene3D G3DSA:3.40.192.10 33 164 3.0E-48 T 20-04-2016 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 SUPERFAMILY SSF53223 6 184 3.17E-56 T 20-04-2016 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 100 113 - T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APRE_RS00960 3643e8c9684810cd397898a42e395674 423 Gene3D G3DSA:3.40.50.720 182 421 2.5E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 PANTHER PTHR13932:SF5 2 372 1.5E-119 T 20-04-2016 APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 Pfam PF04055 Radical SAM superfamily 8 173 8.5E-21 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 PANTHER PTHR13932 2 372 1.5E-119 T 20-04-2016 APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 SUPERFAMILY SSF102114 3 366 1.01E-100 T 20-04-2016 APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 330 1.8E-82 T 20-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 Pfam PF06969 HemN C-terminal domain 299 361 5.8E-9 T 20-04-2016 IPR010723 HemN, C-terminal APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 Gene3D G3DSA:3.80.30.20 4 235 1.8E-40 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS05990 9eb512a318b9e9fbb33b86d4d728e053 372 SMART SM00729 3 219 1.8E-55 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Gene3D G3DSA:2.60.40.10 23 118 1.6E-18 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 PANTHER PTHR10357 25 598 2.7E-181 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 SUPERFAMILY SSF81296 26 119 1.5E-16 T 20-04-2016 IPR014756 Immunoglobulin E-set APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 29 574 1.3E-157 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Gene3D G3DSA:2.60.40.1180 505 574 3.4E-13 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 SMART SM00642 144 481 3.1E-7 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Pfam PF00128 Alpha amylase, catalytic domain 162 239 3.0E-9 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Pfam PF00128 Alpha amylase, catalytic domain 266 462 5.9E-10 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 29 103 1.1E-9 T 20-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 SUPERFAMILY SSF51445 115 498 7.72E-91 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Gene3D G3DSA:3.20.20.80 138 491 6.1E-77 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 PIRSF PIRSF000463 2 590 2.8E-185 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 SUPERFAMILY SSF51011 505 575 5.76E-12 T 20-04-2016 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 PANTHER PTHR10357:SF160 25 598 2.7E-181 T 20-04-2016 APRE_RS06490 86865d82adeef137aea1721ca4864c33 599 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 509 598 5.2E-11 T 20-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 SMART SM00382 35 223 8.0E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 SUPERFAMILY SSF52540 9 233 3.63E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 Pfam PF00005 ABC transporter 279 435 4.1E-18 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 Pfam PF00005 ABC transporter 26 175 2.1E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 PANTHER PTHR24220 12 388 3.4E-175 T 20-04-2016 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 SUPERFAMILY SSF52540 251 494 9.69E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 PANTHER PTHR24220:SF239 12 388 3.4E-175 T 20-04-2016 APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 Gene3D G3DSA:3.40.50.300 7 236 4.8E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01620 898f2e707910babf6ce68bf75fbe74cb 510 Gene3D G3DSA:3.40.50.300 261 496 1.1E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07625 83cbf7e98feaff9f1c49ba64d63d2d7b 291 Pfam PF04203 Sortase family 102 225 1.4E-21 T 20-04-2016 IPR005754 Sortase family APRE_RS07625 83cbf7e98feaff9f1c49ba64d63d2d7b 291 TIGRFAM TIGR01076 sortase_fam: sortase 100 233 2.2E-55 T 20-04-2016 IPR005754 Sortase family APRE_RS07625 83cbf7e98feaff9f1c49ba64d63d2d7b 291 SUPERFAMILY SSF63817 88 230 7.46E-44 T 20-04-2016 IPR023365 Sortase domain APRE_RS07625 83cbf7e98feaff9f1c49ba64d63d2d7b 291 Gene3D G3DSA:2.40.260.10 95 231 1.1E-47 T 20-04-2016 IPR023365 Sortase domain APRE_RS07625 83cbf7e98feaff9f1c49ba64d63d2d7b 291 PANTHER PTHR33393:SF5 41 267 5.8E-19 T 20-04-2016 APRE_RS07625 83cbf7e98feaff9f1c49ba64d63d2d7b 291 PANTHER PTHR33393 41 267 5.8E-19 T 20-04-2016 APRE_RS05715 0d7dc6f51b085e4d52c951f9ea44c2fa 157 SUPERFAMILY SSF55729 22 155 2.62E-14 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS05715 0d7dc6f51b085e4d52c951f9ea44c2fa 157 Pfam PF00583 Acetyltransferase (GNAT) family 52 106 1.4E-6 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS05715 0d7dc6f51b085e4d52c951f9ea44c2fa 157 Gene3D G3DSA:3.40.630.30 10 153 9.6E-17 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS03345 32c1f646cb01f0eb4cb112ee2a32c754 234 Pfam PF12730 ABC-2 family transporter protein 2 174 1.4E-10 T 20-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 SUPERFAMILY SSF64182 348 649 1.31E-56 T 20-04-2016 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 Pfam PF02272 DHHA1 domain 595 641 5.5E-6 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 PIRSF PIRSF026583 4 663 1.6E-193 T 20-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 Gene3D G3DSA:3.90.1640.10 348 541 8.9E-37 T 20-04-2016 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 PANTHER PTHR12112:SF18 659 664 1.6E-83 T 20-04-2016 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 PANTHER PTHR12112:SF18 13 529 1.6E-83 T 20-04-2016 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 PANTHER PTHR12112 659 664 1.6E-83 T 20-04-2016 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 PANTHER PTHR12112 13 529 1.6E-83 T 20-04-2016 APRE_RS02810 85a57714b975a3383a44c93cd1588443 669 Pfam PF01368 DHH family 349 504 8.7E-21 T 20-04-2016 IPR001667 DDH domain APRE_RS00935 71cf9eaa55b3e42ea4b4fd86a26eaf8d 229 PANTHER PTHR11735 1 133 4.9E-38 T 20-04-2016 APRE_RS00935 71cf9eaa55b3e42ea4b4fd86a26eaf8d 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 209 9.0E-43 T 20-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APRE_RS00935 71cf9eaa55b3e42ea4b4fd86a26eaf8d 229 Pfam PF00814 Glycoprotease family 32 143 1.3E-24 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00935 71cf9eaa55b3e42ea4b4fd86a26eaf8d 229 PANTHER PTHR11735:SF11 1 133 4.9E-38 T 20-04-2016 APRE_RS00935 71cf9eaa55b3e42ea4b4fd86a26eaf8d 229 Gene3D G3DSA:3.30.420.40 1 127 6.4E-34 T 20-04-2016 APRE_RS00935 71cf9eaa55b3e42ea4b4fd86a26eaf8d 229 SUPERFAMILY SSF53067 1 101 3.5E-24 T 20-04-2016 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 2 366 7.2E-155 T 20-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 353 7.6E-77 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 PIRSF PIRSF000183 1 369 2.2E-157 T 20-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 Gene3D G3DSA:3.40.50.1770 189 358 8.1E-31 T 20-04-2016 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 PANTHER PTHR10160 1 365 5.1E-184 T 20-04-2016 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 SMART SM01003 4 136 8.6E-69 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 SUPERFAMILY SSF51735 136 304 7.67E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 6.7E-45 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 20-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 SMART SM01002 148 298 2.2E-73 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 Gene3D G3DSA:3.40.50.1770 3 188 3.6E-62 T 20-04-2016 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 SUPERFAMILY SSF52283 2 136 3.4E-60 T 20-04-2016 APRE_RS07210 80c4357b81c6c93a772c329a9a4f3ef1 370 SUPERFAMILY SSF52283 306 361 3.4E-60 T 20-04-2016 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 Gene3D G3DSA:3.40.50.720 1 160 1.1E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 152 8.6E-57 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 315 1.3E-55 T 20-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PIRSF PIRSF000149 1 335 1.7E-114 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 SUPERFAMILY SSF51735 4 168 2.0E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 20-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PANTHER PTHR10836:SF57 1 335 1.6E-193 T 20-04-2016 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 Gene3D G3DSA:3.30.360.10 161 317 2.9E-61 T 20-04-2016 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 5.6E-129 T 20-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 SMART SM00846 3 152 2.4E-89 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PANTHER PTHR10836 1 335 1.6E-193 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 SUPERFAMILY SSF55347 151 315 1.28E-59 T 20-04-2016 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 6.6E-32 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 6.6E-32 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 6.6E-32 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 6.6E-32 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS03955 eb8c500e3eabe02f9620228777cdb334 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 6.6E-32 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 Gene3D G3DSA:2.60.40.10 25 114 9.0E-17 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 Pfam PF00128 Alpha amylase, catalytic domain 300 499 7.6E-6 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 Pfam PF00128 Alpha amylase, catalytic domain 170 268 9.5E-7 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 PANTHER PTHR10357 21 362 2.4E-120 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 PANTHER PTHR10357 380 634 2.4E-120 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 PANTHER PTHR10357:SF99 21 362 2.4E-120 T 20-04-2016 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 PANTHER PTHR10357:SF99 380 634 2.4E-120 T 20-04-2016 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 21 591 3.7E-180 T 20-04-2016 IPR011840 Pullulanase, type I APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 SUPERFAMILY SSF51445 119 541 1.43E-105 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 SMART SM00642 117 535 3.6E-6 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 24 100 1.1E-9 T 20-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 Gene3D G3DSA:3.20.20.80 130 542 3.0E-85 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS04465 62da5cdc0faaa41015774f142283c858 640 SUPERFAMILY SSF81296 23 120 1.92E-19 T 20-04-2016 IPR014756 Immunoglobulin E-set APRE_RS08565 b882ef5391187486120af3cf99aab4b3 305 Pfam PF00483 Nucleotidyl transferase 21 183 3.4E-9 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APRE_RS08565 b882ef5391187486120af3cf99aab4b3 305 SUPERFAMILY SSF53448 1 288 2.93E-24 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS08565 b882ef5391187486120af3cf99aab4b3 305 Gene3D G3DSA:3.90.550.10 2 291 8.8E-24 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 195 299 4.6E-22 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.10.20.30 15 85 1.1E-19 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 SUPERFAMILY SSF54292 21 89 1.26E-15 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 SUPERFAMILY SSF54665 173 318 5.89E-35 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.30.365.10 449 523 6.9E-38 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.30.365.10 288 340 6.9E-38 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.30.365.10 341 445 7.1E-27 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 SUPERFAMILY SSF56003 291 863 4.97E-138 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 70 2.0E-6 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 50 58 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.90.1170.50 182 287 4.4E-31 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Pfam PF01799 [2Fe-2S] binding domain 84 155 6.0E-24 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.30.365.10 600 698 5.0E-23 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 316 792 5.6E-111 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 TIGRFAM TIGR03311 Se_dep_XDH: selenium-dependent xanthine dehydrogenase 20 870 0.0 T 20-04-2016 IPR017697 Selenium-dependent xanthine dehydrogenase APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 PANTHER PTHR11908 121 845 1.2E-245 T 20-04-2016 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 PANTHER PTHR11908:SF91 121 845 1.2E-245 T 20-04-2016 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 SMART SM01008 192 299 1.8E-28 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.30.365.10 525 599 3.1E-33 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:3.30.365.10 729 863 3.1E-33 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 SUPERFAMILY SSF47741 84 166 1.05E-26 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APRE_RS01945 1ca862932a76e69bdbbf4c800e361383 877 Gene3D G3DSA:1.10.150.120 86 181 2.0E-28 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 SUPERFAMILY SSF52172 1 167 1.04E-32 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 Pfam PF00072 Response regulator receiver domain 3 111 3.3E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 PANTHER PTHR26402:SF519 1 223 2.8E-97 T 20-04-2016 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 Gene3D G3DSA:1.10.10.10 125 223 1.5E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 PANTHER PTHR26402 1 223 2.8E-97 T 20-04-2016 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 Gene3D G3DSA:3.40.50.2300 1 119 9.8E-33 T 20-04-2016 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 SMART SM00862 145 221 1.8E-17 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 SMART SM00448 1 111 2.0E-32 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS05575 7a0e688bbbdeddc0dc10744e24bb4e24 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 2.7E-21 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS00890 155e7bbc828596267fc052da64808fcd 367 Pfam PF13638 PIN domain 174 287 3.0E-5 T 20-04-2016 IPR002716 PIN domain APRE_RS00890 155e7bbc828596267fc052da64808fcd 367 SUPERFAMILY SSF88723 173 299 4.25E-24 T 20-04-2016 IPR029060 PIN domain-like APRE_RS00890 155e7bbc828596267fc052da64808fcd 367 SMART SM00670 171 278 1.3E-10 T 20-04-2016 IPR002716 PIN domain APRE_RS00890 155e7bbc828596267fc052da64808fcd 367 Gene3D G3DSA:3.40.50.1010 173 300 2.9E-30 T 20-04-2016 IPR029060 PIN domain-like APRE_RS00890 155e7bbc828596267fc052da64808fcd 367 PANTHER PTHR11603:SF147 157 367 9.1E-104 T 20-04-2016 APRE_RS00890 155e7bbc828596267fc052da64808fcd 367 PANTHER PTHR11603 157 367 9.1E-104 T 20-04-2016 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 SUPERFAMILY SSF52540 9 112 3.86E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 Pfam PF00005 ABC transporter 39 368 7.3E-20 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 Gene3D G3DSA:3.40.50.300 258 442 2.9E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 Gene3D G3DSA:3.40.50.300 5 148 7.5E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 419 505 9.2E-29 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 PANTHER PTHR24220:SF336 10 72 1.1E-137 T 20-04-2016 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 PANTHER PTHR24220:SF336 249 518 1.1E-137 T 20-04-2016 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 420 485 6.3E-19 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 SUPERFAMILY SSF52540 113 223 3.26E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 SUPERFAMILY SSF52540 47 79 3.26E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 SUPERFAMILY SSF52540 258 502 4.52E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 PANTHER PTHR24220 10 72 1.1E-137 T 20-04-2016 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 PANTHER PTHR24220 249 518 1.1E-137 T 20-04-2016 APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 SMART SM00382 46 418 2.1E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00095 55a4cd09ac222e2e9b206bfe9986160f 537 ProSitePatterns PS00211 ABC transporters family signature. 341 355 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 123 133 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 SUPERFAMILY SSF55973 2 108 3.92E-45 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Gene3D G3DSA:3.30.300.10 10 139 3.7E-44 T 20-04-2016 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 PIRSF PIRSF000497 1 389 4.7E-170 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 PANTHER PTHR11964 6 388 7.7E-251 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Gene3D G3DSA:3.30.300.10 251 388 7.4E-67 T 20-04-2016 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 240 379 9.4E-68 T 20-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 266 274 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Gene3D G3DSA:3.30.300.10 140 240 3.8E-40 T 20-04-2016 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 388 1.3E-173 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 389 53.595 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 SUPERFAMILY SSF55973 117 239 1.77E-46 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 SUPERFAMILY SSF55973 240 388 9.42E-67 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 99 2.1E-41 T 20-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00905 fca87655ca46896a8d27b9501b1e5ffc 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 121 238 2.7E-43 T 20-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS01890 e0bf5943b50dd4a4449cccc5d24f6ac5 865 SUPERFAMILY SSF52540 63 99 7.82E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01890 e0bf5943b50dd4a4449cccc5d24f6ac5 865 SUPERFAMILY SSF52540 366 452 7.82E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01890 e0bf5943b50dd4a4449cccc5d24f6ac5 865 SUPERFAMILY SSF52540 26 238 7.4E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01890 e0bf5943b50dd4a4449cccc5d24f6ac5 865 Gene3D G3DSA:3.40.50.300 31 238 1.7E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01890 e0bf5943b50dd4a4449cccc5d24f6ac5 865 Pfam PF04851 Type III restriction enzyme, res subunit 35 233 1.0E-30 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APRE_RS01890 e0bf5943b50dd4a4449cccc5d24f6ac5 865 SMART SM00487 32 261 0.0029 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PANTHER PTHR24093 667 683 1.6E-103 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PANTHER PTHR24093 32 644 1.6E-103 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 Gene3D G3DSA:3.40.50.1000 514 633 8.4E-32 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 Gene3D G3DSA:3.40.1110.10 405 513 1.3E-8 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 Gene3D G3DSA:3.40.1110.10 375 404 1.4E-4 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 586 602 7.0E-5 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 617 642 7.0E-5 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 682 2.5E-141 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 386 392 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 SUPERFAMILY SSF81653 198 292 1.44E-21 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 Gene3D G3DSA:2.70.150.10 149 293 5.8E-23 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 SUPERFAMILY SSF56784 442 681 4.13E-41 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 SUPERFAMILY SSF56784 382 402 4.13E-41 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 Pfam PF00702 haloacid dehalogenase-like hydrolase 381 598 6.5E-33 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 Pfam PF00122 E1-E2 ATPase 165 375 3.2E-43 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 171 674 3.2E-65 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PANTHER PTHR24093:SF50 667 683 1.6E-103 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PANTHER PTHR24093:SF50 32 644 1.6E-103 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 242 256 1.3E-21 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 521 1.3E-21 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 384 398 1.3E-21 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 621 1.3E-21 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 605 1.3E-21 T 20-04-2016 APRE_RS00170 26ac692bd0efe0a555e9cdeb14a29055 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 543 1.3E-21 T 20-04-2016 APRE_RS05115 d33666695cc11e18780907083184270c 706 Pfam PF03477 ATP cone domain 2 86 4.8E-15 T 20-04-2016 IPR005144 ATP-cone domain APRE_RS05115 d33666695cc11e18780907083184270c 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 115 705 3.1E-178 T 20-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APRE_RS05115 d33666695cc11e18780907083184270c 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.0E-155 T 20-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APRE_RS05115 d33666695cc11e18780907083184270c 706 Gene3D G3DSA:3.20.70.20 125 687 5.4E-167 T 20-04-2016 APRE_RS05115 d33666695cc11e18780907083184270c 706 SUPERFAMILY SSF51998 121 687 4.58E-151 T 20-04-2016 APRE_RS05115 d33666695cc11e18780907083184270c 706 PANTHER PTHR21075 1 706 1.1E-161 T 20-04-2016 APRE_RS05115 d33666695cc11e18780907083184270c 706 ProSitePatterns PS00850 Glycine radical domain signature. 679 687 - T 20-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APRE_RS02850 b1f891bf4f85a90bd3c2e5fbf4abc703 217 Gene3D G3DSA:3.40.50.300 33 211 1.8E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02850 b1f891bf4f85a90bd3c2e5fbf4abc703 217 PANTHER PTHR32309:SF13 10 217 6.1E-54 T 20-04-2016 APRE_RS02850 b1f891bf4f85a90bd3c2e5fbf4abc703 217 SUPERFAMILY SSF52540 33 210 1.36E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02850 b1f891bf4f85a90bd3c2e5fbf4abc703 217 Pfam PF13614 AAA domain 34 197 3.0E-16 T 20-04-2016 IPR025669 AAA domain APRE_RS02850 b1f891bf4f85a90bd3c2e5fbf4abc703 217 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 15 217 7.7E-59 T 20-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 APRE_RS02850 b1f891bf4f85a90bd3c2e5fbf4abc703 217 PANTHER PTHR32309 10 217 6.1E-54 T 20-04-2016 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 97 111 - T 20-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 PANTHER PTHR21600:SF2 1 232 1.0E-60 T 20-04-2016 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 219 1.6E-38 T 20-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 SUPERFAMILY SSF55120 57 224 1.56E-32 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 Pfam PF00849 RNA pseudouridylate synthase 61 190 3.4E-14 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 PANTHER PTHR21600 1 232 1.0E-60 T 20-04-2016 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 Pfam PF01479 S4 domain 1 47 1.3E-7 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 SUPERFAMILY SSF55174 1 79 1.08E-14 T 20-04-2016 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 SMART SM00363 1 62 2.5E-9 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS05225 05bc8349a9da8e98045506758b1bfba3 233 Gene3D G3DSA:3.10.290.10 1 62 5.3E-21 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS05765 b30bce4f709301b22013ba43f701a2c1 556 Gene3D G3DSA:3.90.1720.10 435 555 4.7E-40 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS05765 b30bce4f709301b22013ba43f701a2c1 556 Pfam PF00877 NlpC/P60 family 447 554 3.7E-24 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS05765 b30bce4f709301b22013ba43f701a2c1 556 SMART SM00287 333 397 4.5E-4 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS05765 b30bce4f709301b22013ba43f701a2c1 556 SMART SM00287 151 209 21.0 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS05765 b30bce4f709301b22013ba43f701a2c1 556 SUPERFAMILY SSF54001 431 555 6.87E-38 T 20-04-2016 APRE_RS05765 b30bce4f709301b22013ba43f701a2c1 556 PANTHER PTHR21666 426 556 1.2E-30 T 20-04-2016 APRE_RS01735 1753107e740db384af49167e658b25d5 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 100 2.5E-20 T 20-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APRE_RS01735 1753107e740db384af49167e658b25d5 106 PIRSF PIRSF003203 1 105 3.2E-31 T 20-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 96 8.1E-14 T 20-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 Gene3D G3DSA:3.10.28.10 114 196 1.2E-6 T 20-04-2016 IPR027434 Homing endonuclease GO:0004519 APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 Pfam PF14527 WhiA LAGLIDADG-like domain 120 211 1.6E-26 T 20-04-2016 APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 Pfam PF02650 WhiA C-terminal HTH domain 214 297 5.9E-25 T 20-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 6 298 9.5E-65 T 20-04-2016 APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 PANTHER PTHR37307 2 300 7.9E-57 T 20-04-2016 APRE_RS03515 58d4228e3850cdd30bc5f3d561dad8ea 300 SUPERFAMILY SSF55608 113 214 5.53E-10 T 20-04-2016 IPR027434 Homing endonuclease GO:0004519 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 PANTHER PTHR33695 1 144 6.3E-38 T 20-04-2016 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 42 50 7.3E-16 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 87 102 7.3E-16 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 121 137 7.3E-16 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 145 15.261 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 PANTHER PTHR33695:SF1 1 144 6.3E-38 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 TIGRFAM TIGR00077 lspA: signal peptidase II 2 142 4.0E-31 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 ProSitePatterns PS00855 Signal peptidases II signature. 90 102 - T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS04710 d364ff1241c34f8f7965929587b170ef 145 Pfam PF01252 Signal peptidase (SPase) II 6 140 1.9E-34 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 Gene3D G3DSA:2.40.50.140 5 74 1.3E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 397 407 - T 20-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 SUPERFAMILY SSF50249 5 61 3.31E-8 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 345 376 - T 20-04-2016 IPR030390 RNA methyltransferase TrmA, active site APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 84 414 1.5E-24 T 20-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 SUPERFAMILY SSF53335 64 413 2.72E-55 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 14 407 2.6E-79 T 20-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 Gene3D G3DSA:3.40.50.150 220 413 1.2E-51 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 PANTHER PTHR11061 5 415 4.9E-100 T 20-04-2016 APRE_RS03535 5b555518988b3d03483f69130c788ae2 415 PANTHER PTHR11061:SF30 5 415 4.9E-100 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PANTHER PTHR11451:SF31 1 639 0.0 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Gene3D G3DSA:3.30.980.10 66 129 3.6E-40 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Gene3D G3DSA:3.30.980.10 188 224 3.6E-40 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 527 7.6E-41 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Gene3D G3DSA:3.40.50.800 530 635 5.1E-35 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 SUPERFAMILY SSF55681 243 524 5.57E-94 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PANTHER PTHR11451 1 639 0.0 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 SMART SM00863 169 219 2.2E-21 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Pfam PF03129 Anticodon binding domain 540 629 5.6E-25 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Pfam PF02824 TGS domain 2 55 1.7E-7 T 20-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.872 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 5.8E-13 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 SUPERFAMILY SSF52954 526 632 1.15E-30 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Gene3D G3DSA:3.30.930.10 242 529 4.6E-119 T 20-04-2016 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Gene3D G3DSA:3.10.20.30 1 64 3.3E-16 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 6.1E-52 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 6.1E-52 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 6.1E-52 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 6.1E-52 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 6.1E-52 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.0E-218 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 SUPERFAMILY SSF55186 64 241 1.44E-61 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 SUPERFAMILY SSF81271 2 61 5.23E-10 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APRE_RS08515 b359d2e72ddfb14a57f6781c32446dc8 640 Gene3D G3DSA:3.30.54.20 131 187 2.3E-23 T 20-04-2016 APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 PANTHER PTHR12903 1 99 1.6E-29 T 20-04-2016 APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 20-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 SMART SM00739 2 29 2.3E-6 T 20-04-2016 IPR005824 KOW APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 Pfam PF00467 KOW motif 5 36 3.1E-7 T 20-04-2016 IPR005824 KOW APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 SUPERFAMILY SSF50104 1 98 6.88E-30 T 20-04-2016 IPR008991 Translation protein SH3-like domain APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 96 16.694 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 Gene3D G3DSA:2.30.30.30 1 90 3.8E-21 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 100 4.8E-18 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08015 2ee05e03fa7cb2b8b472d109a5ea6ec9 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 8.0E-28 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04800 467704cc922ea3a34f686ffb56a3c19c 80 Pfam PF06949 Protein of unknown function (DUF1292) 9 73 8.3E-9 T 20-04-2016 IPR009711 Uncharacterised protein family UPF0473 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 SUPERFAMILY SSF47789 254 316 3.92E-21 T 20-04-2016 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 SUPERFAMILY SSF56553 50 171 4.32E-35 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 SUPERFAMILY SSF55257 7 50 1.7E-31 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 SUPERFAMILY SSF55257 172 226 1.7E-31 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 PANTHER PTHR32108:SF0 9 318 1.8E-116 T 20-04-2016 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Gene3D G3DSA:1.10.150.20 253 317 4.2E-26 T 20-04-2016 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 150 6.3E-20 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 PANTHER PTHR32108 9 318 1.8E-116 T 20-04-2016 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Gene3D G3DSA:3.30.1360.10 11 102 4.6E-11 T 20-04-2016 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Gene3D G3DSA:3.30.1360.10 117 224 1.2E-27 T 20-04-2016 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 318 34.661 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 317 2.0E-13 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 310 7.6E-25 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 317 5.5E-111 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 SMART SM00662 20 227 1.7E-79 T 20-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS07935 704f5a8597e13016466b1ff56c7ecf01 318 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 221 1.1E-22 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS00490 0c95968df949d2c31c0be39b3c02debd 148 Pfam PF01575 MaoC like domain 33 124 6.7E-12 T 20-04-2016 IPR002539 MaoC-like domain APRE_RS00490 0c95968df949d2c31c0be39b3c02debd 148 SUPERFAMILY SSF54637 1 147 8.14E-25 T 20-04-2016 IPR029069 HotDog domain APRE_RS00490 0c95968df949d2c31c0be39b3c02debd 148 PANTHER PTHR13078 1 143 1.2E-12 T 20-04-2016 APRE_RS00490 0c95968df949d2c31c0be39b3c02debd 148 Gene3D G3DSA:3.10.129.10 2 146 1.1E-25 T 20-04-2016 IPR029069 HotDog domain APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 Hamap MF_01974 Methionine aminopeptidase [map]. 2 250 38.172 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 PANTHER PTHR10804:SF108 1 250 1.9E-109 T 20-04-2016 APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 1.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 1.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 1.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 Pfam PF00557 Metallopeptidase family M24 11 241 6.3E-49 T 20-04-2016 IPR000994 Peptidase M24, structural domain APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 SUPERFAMILY SSF55920 3 252 6.15E-80 T 20-04-2016 IPR000994 Peptidase M24, structural domain APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 Gene3D G3DSA:3.90.230.10 6 252 8.5E-86 T 20-04-2016 IPR000994 Peptidase M24, structural domain APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 PANTHER PTHR10804 1 250 1.9E-109 T 20-04-2016 APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 249 1.6E-84 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APRE_RS05350 b622e0ab089bb3edcfb69a3416b3b401 272 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 20-04-2016 IPR020595 MnmG-related, conserved site APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 20-04-2016 IPR020595 MnmG-related, conserved site APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 Gene3D G3DSA:3.50.50.60 9 180 8.8E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 Pfam PF01134 Glucose inhibited division protein A 11 401 2.4E-148 T 20-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 8 626 39.393 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 PANTHER PTHR11806:SF0 9 625 0.0 T 20-04-2016 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 4.0E-6 T 20-04-2016 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 4.0E-6 T 20-04-2016 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 Pfam PF13932 GidA associated domain 404 618 2.3E-70 T 20-04-2016 IPR026904 GidA associated domain 3 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 SMART SM01228 548 619 9.5E-40 T 20-04-2016 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 PANTHER PTHR11806 9 625 0.0 T 20-04-2016 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 10 623 9.0E-247 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 SUPERFAMILY SSF51905 102 264 2.03E-36 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08840 7d89a1314f82e5558a3e621f291111b0 628 SUPERFAMILY SSF51905 9 71 2.03E-36 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 Gene3D G3DSA:3.40.50.300 138 303 9.2E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 308 36.141 T 20-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 SUPERFAMILY SSF53795 138 300 1.71E-35 T 20-04-2016 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 PANTHER PTHR30305:SF1 4 312 3.8E-106 T 20-04-2016 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 Gene3D G3DSA:3.40.1390.20 6 134 1.3E-35 T 20-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 Pfam PF02603 HPr Serine kinase N terminus 6 128 2.0E-33 T 20-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 SUPERFAMILY SSF75138 6 133 2.22E-26 T 20-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 Pfam PF07475 HPr Serine kinase C-terminal domain 133 300 2.3E-68 T 20-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 PANTHER PTHR30305 4 312 3.8E-106 T 20-04-2016 APRE_RS05325 9968da0b71785ebb27a63497eba23da2 325 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 7 301 1.2E-109 T 20-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 SUPERFAMILY SSF55874 283 439 2.36E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 2.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 2.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 277 4.5E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 Gene3D G3DSA:1.10.287.130 214 277 1.5E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 SMART SM00388 222 286 4.6E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 SUPERFAMILY SSF47384 208 279 3.14E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 Gene3D G3DSA:3.30.565.10 292 438 4.2E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 438 4.7E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 PANTHER PTHR24423 4 10 1.1E-60 T 20-04-2016 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 PANTHER PTHR24423 162 437 1.1E-60 T 20-04-2016 APRE_RS06185 0e338b52e189fda4304ad33b46b35307 441 SMART SM00387 331 441 5.3E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 Pfam PF00005 ABC transporter 23 170 8.4E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 2 271 1.1E-111 T 20-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 PANTHER PTHR24220 3 268 5.0E-94 T 20-04-2016 APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 Gene3D G3DSA:3.40.50.300 1 235 6.1E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 PANTHER PTHR24220:SF435 3 268 5.0E-94 T 20-04-2016 APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 SUPERFAMILY SSF52540 2 233 7.48E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07290 ff6751f05cb7a819f0abc11502cb460a 273 SMART SM00382 32 218 6.9E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02610 b2401906cadc89b4d7dc34e63b7297a9 301 SUPERFAMILY SSF53067 126 297 5.13E-30 T 20-04-2016 APRE_RS02610 b2401906cadc89b4d7dc34e63b7297a9 301 PANTHER PTHR30005 1 300 4.2E-53 T 20-04-2016 APRE_RS02610 b2401906cadc89b4d7dc34e63b7297a9 301 Gene3D G3DSA:3.30.420.150 127 299 1.8E-29 T 20-04-2016 APRE_RS02610 b2401906cadc89b4d7dc34e63b7297a9 301 Gene3D G3DSA:3.30.420.40 2 121 2.9E-32 T 20-04-2016 APRE_RS02610 b2401906cadc89b4d7dc34e63b7297a9 301 SUPERFAMILY SSF53067 2 120 7.92E-28 T 20-04-2016 APRE_RS02610 b2401906cadc89b4d7dc34e63b7297a9 301 Pfam PF02541 Ppx/GppA phosphatase family 17 298 1.3E-53 T 20-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APRE_RS06630 67ddc4c7e857ece24eafd31de1a11bd1 361 Pfam PF12698 ABC-2 family transporter protein 17 350 6.5E-23 T 20-04-2016 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Gene3D G3DSA:3.40.50.300 417 646 2.2E-87 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SMART SM00958 225 358 6.3E-60 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SUPERFAMILY SSF81767 224 368 1.7E-41 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SMART SM00957 3 402 2.4E-274 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 844 0.0 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Gene3D G3DSA:3.90.1440.10 228 368 3.9E-45 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SUPERFAMILY SSF52540 4 225 2.66E-83 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SUPERFAMILY SSF52540 368 415 2.66E-83 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PANTHER PTHR30612 1 520 0.0 T 20-04-2016 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PANTHER PTHR30612 578 886 0.0 T 20-04-2016 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 2 858 19.58 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 20-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Pfam PF01043 SecA preprotein cross-linking domain 229 358 6.7E-38 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SUPERFAMILY SSF81886 648 870 2.09E-68 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Gene3D G3DSA:3.40.50.300 5 225 9.2E-122 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Gene3D G3DSA:3.40.50.300 369 416 9.2E-122 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Gene3D G3DSA:1.10.3060.10 676 857 2.4E-53 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 SUPERFAMILY SSF52540 416 646 3.99E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 60 84 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 167 187 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 413 426 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 339 361 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 376 393 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 98 112 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 PRINTS PR00906 SecA protein signature 114 124 2.1E-69 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Pfam PF07516 SecA Wing and Scaffold domain 645 855 2.6E-60 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APRE_RS06345 93ec8a6160d59f5886334a09ed0f9844 904 Pfam PF07517 SecA DEAD-like domain 5 402 1.6E-130 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APRE_RS06605 7aca6f13f7218b2f5196875dcbace8b7 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 3.2E-33 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06605 7aca6f13f7218b2f5196875dcbace8b7 81 PANTHER PTHR12919 2 75 8.2E-36 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06605 7aca6f13f7218b2f5196875dcbace8b7 81 Pfam PF00886 Ribosomal protein S16 9 67 3.4E-26 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06605 7aca6f13f7218b2f5196875dcbace8b7 81 Gene3D G3DSA:3.30.1320.10 2 80 5.9E-34 T 20-04-2016 IPR023803 Ribosomal protein S16 domain APRE_RS06605 7aca6f13f7218b2f5196875dcbace8b7 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.34 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06605 7aca6f13f7218b2f5196875dcbace8b7 81 SUPERFAMILY SSF54565 2 79 5.76E-31 T 20-04-2016 IPR023803 Ribosomal protein S16 domain APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 Pfam PF02527 rRNA small subunit methyltransferase G 4 173 1.1E-52 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 SUPERFAMILY SSF53335 6 210 3.86E-42 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 Gene3D G3DSA:3.40.50.150 6 210 7.9E-68 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 1 187 24.975 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 PANTHER PTHR31760:SF0 7 210 4.0E-74 T 20-04-2016 APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 PANTHER PTHR31760 7 210 4.0E-74 T 20-04-2016 APRE_RS08835 c4eb3609cc0a71f8682a7d7363c4b88f 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 6 184 4.9E-52 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APRE_RS00220 7ec1491d675a736f20f74bf85a787885 251 PANTHER PTHR24220:SF534 3 249 2.0E-89 T 20-04-2016 APRE_RS00220 7ec1491d675a736f20f74bf85a787885 251 SMART SM00382 31 226 5.5E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00220 7ec1491d675a736f20f74bf85a787885 251 Gene3D G3DSA:3.40.50.300 1 244 1.3E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00220 7ec1491d675a736f20f74bf85a787885 251 Pfam PF00005 ABC transporter 23 177 3.6E-28 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00220 7ec1491d675a736f20f74bf85a787885 251 PANTHER PTHR24220 3 249 2.0E-89 T 20-04-2016 APRE_RS00220 7ec1491d675a736f20f74bf85a787885 251 SUPERFAMILY SSF52540 2 239 2.25E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00135 d80240604f38f9980b43e653f9383494 412 PANTHER PTHR11019:SF101 305 410 3.1E-16 T 20-04-2016 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 356 398 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 PANTHER PTHR11019 305 410 3.1E-16 T 20-04-2016 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 Gene3D G3DSA:1.10.10.60 194 236 8.6E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 Gene3D G3DSA:1.10.10.60 251 294 2.1E-4 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 SMART SM00342 206 289 3.4E-8 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 SMART SM00342 319 402 1.7E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 Gene3D G3DSA:1.10.10.60 355 404 1.6E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 Pfam PF12833 Helix-turn-helix domain 215 290 6.3E-8 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 Pfam PF12833 Helix-turn-helix domain 328 403 1.2E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 386 402 1.3E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 371 386 1.3E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APRE_RS00135 d80240604f38f9980b43e653f9383494 412 SUPERFAMILY SSF46689 355 406 1.66E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 Gene3D G3DSA:1.10.2020.10 48 134 2.4E-40 T 20-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 Hamap MF_00675 Uronate isomerase [uxaC]. 1 466 45.491 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 PANTHER PTHR30068:SF4 1 468 5.9E-210 T 20-04-2016 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 Gene3D G3DSA:3.20.20.140 2 43 1.4E-141 T 20-04-2016 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 Gene3D G3DSA:3.20.20.140 137 464 1.4E-141 T 20-04-2016 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 PANTHER PTHR30068 1 468 5.9E-210 T 20-04-2016 APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 SUPERFAMILY SSF51556 1 464 2.27E-167 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS08200 714bae63ef2b3aa96012181ba3c8deb8 468 Pfam PF02614 Glucuronate isomerase 1 463 4.9E-197 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 Pfam PF00694 Aconitase C-terminal domain 511 575 4.6E-24 T 20-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 Gene3D G3DSA:3.20.19.10 459 638 8.1E-41 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 638 4.5E-254 T 20-04-2016 IPR006250 Aconitase, putative APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 Pfam PF00330 Aconitase family (aconitate hydratase) 8 407 5.6E-117 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 Gene3D G3DSA:3.30.499.10 2 156 1.5E-46 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PANTHER PTHR11670:SF30 1 638 2.0E-230 T 20-04-2016 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PANTHER PTHR11670 1 638 2.0E-230 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 Gene3D G3DSA:3.40.1060.10 158 262 2.9E-38 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 Gene3D G3DSA:3.30.499.10 271 458 1.1E-58 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 SUPERFAMILY SSF52016 451 638 6.28E-45 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 SUPERFAMILY SSF53732 1 423 3.14E-151 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PRINTS PR00415 Aconitase family signature 349 362 2.16E-26 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PRINTS PR00415 Aconitase family signature 110 123 2.16E-26 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PRINTS PR00415 Aconitase family signature 186 199 2.16E-26 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PRINTS PR00415 Aconitase family signature 124 139 2.16E-26 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS05620 a34aa7164f4dcb72dddfafcbca0b0c23 642 PRINTS PR00415 Aconitase family signature 200 213 2.16E-26 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APRE_RS02455 9c07d11db9f51fb0df8b61bb4cad4fa6 264 SUPERFAMILY SSF81345 4 259 3.14E-30 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS02455 9c07d11db9f51fb0df8b61bb4cad4fa6 264 PANTHER PTHR30477:SF0 1 263 4.1E-67 T 20-04-2016 APRE_RS02455 9c07d11db9f51fb0df8b61bb4cad4fa6 264 Pfam PF00950 ABC 3 transport family 7 261 9.4E-60 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APRE_RS02455 9c07d11db9f51fb0df8b61bb4cad4fa6 264 Gene3D G3DSA:1.10.3470.10 45 262 2.7E-10 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS02455 9c07d11db9f51fb0df8b61bb4cad4fa6 264 PANTHER PTHR30477 1 263 4.1E-67 T 20-04-2016 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 SMART SM00876 221 314 0.0029 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 4 336 2.7E-162 T 20-04-2016 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 Gene3D G3DSA:3.20.20.70 12 329 1.6E-82 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 SMART SM00729 45 254 3.1E-24 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 Pfam PF04055 Radical SAM superfamily 49 212 3.2E-15 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 PIRSF PIRSF004762 2 321 2.1E-70 T 20-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 PANTHER PTHR22976:SF28 10 344 3.1E-121 T 20-04-2016 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 PANTHER PTHR22976 10 344 3.1E-121 T 20-04-2016 APRE_RS01490 dd2c98ff0f0050c473a9d3af042e29f3 347 SUPERFAMILY SSF102114 16 328 1.7E-58 T 20-04-2016 APRE_RS03405 67b4b491f9d7f5fc9f890bb408d37226 103 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 8.8E-5 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03405 67b4b491f9d7f5fc9f890bb408d37226 103 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 1.3E-6 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03405 67b4b491f9d7f5fc9f890bb408d37226 103 SUPERFAMILY SSF54523 9 61 5.1E-6 T 20-04-2016 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 SUPERFAMILY SSF46785 9 79 2.72E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 PANTHER PTHR35786 3 210 7.5E-81 T 20-04-2016 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 Pfam PF02629 CoA binding domain 81 180 1.0E-21 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 Gene3D G3DSA:1.10.10.10 5 76 2.5E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 210 35.311 T 20-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 SMART SM00881 79 181 2.3E-13 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 Gene3D G3DSA:3.40.50.720 77 210 8.4E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 PANTHER PTHR35786:SF1 3 210 7.5E-81 T 20-04-2016 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 Pfam PF06971 Putative DNA-binding protein N-terminus 5 53 9.8E-20 T 20-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 APRE_RS07535 6f4bcbff514f6ce3edaa8fd4b10c6830 214 SUPERFAMILY SSF51735 81 207 7.88E-26 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PANTHER PTHR24078:SF261 181 246 4.8E-15 T 20-04-2016 APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PANTHER PTHR24078:SF261 69 107 4.8E-15 T 20-04-2016 APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 SMART SM00271 190 247 4.6E-15 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 Pfam PF00226 DnaJ domain 194 246 7.5E-16 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 SUPERFAMILY SSF46565 138 246 8.5E-18 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 Gene3D G3DSA:1.10.287.110 191 245 1.4E-15 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PRINTS PR00625 DnaJ domain signature 227 247 1.1E-11 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PRINTS PR00625 DnaJ domain signature 211 226 1.1E-11 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PRINTS PR00625 DnaJ domain signature 193 211 1.1E-11 T 20-04-2016 IPR001623 DnaJ domain APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PANTHER PTHR24078 181 246 4.8E-15 T 20-04-2016 APRE_RS02910 9b1caf9ccfc76b3b9f4895982149c3cf 255 PANTHER PTHR24078 69 107 4.8E-15 T 20-04-2016 APRE_RS05500 a9d455641a09af2d53308cb3267cc081 137 Pfam PF00892 EamA-like transporter family 2 136 4.8E-21 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APRE_RS05500 a9d455641a09af2d53308cb3267cc081 137 PANTHER PTHR22911 1 137 1.1E-19 T 20-04-2016 APRE_RS05500 a9d455641a09af2d53308cb3267cc081 137 SUPERFAMILY SSF103481 60 136 3.53E-13 T 20-04-2016 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 PANTHER PTHR21091:SF18 4 233 3.5E-72 T 20-04-2016 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 269 9.8E-73 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 203 1.5E-26 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 Gene3D G3DSA:3.40.1010.10 5 112 5.2E-16 T 20-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 Gene3D G3DSA:3.30.950.10 113 221 5.3E-30 T 20-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 PANTHER PTHR21091 4 233 3.5E-72 T 20-04-2016 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 SUPERFAMILY SSF53790 5 218 9.29E-68 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 220 33.651 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS05885 c61c41f7754ade9856214a2d4075f8ce 272 PIRSF PIRSF005917 1 272 1.1E-89 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 465 1.9E-203 T 20-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 Gene3D G3DSA:3.30.1360.60 3 81 1.0E-23 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 PANTHER PTHR30175 1 468 4.8E-245 T 20-04-2016 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 PANTHER PTHR30175:SF4 1 468 4.8E-245 T 20-04-2016 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 109 7.2E-13 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 Pfam PF00367 phosphotransferase system, EIIB 13 42 2.7E-12 T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 SUPERFAMILY SSF55604 8 80 6.67E-20 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS02505 6b81378499bf615ed69efb1256e19290 481 Pfam PF02378 Phosphotransferase system, EIIC 111 408 1.1E-34 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS06085 d007ae6ffe41ed318d4913f6ad5475e9 197 PANTHER PTHR12677:SF26 1 169 4.0E-13 T 20-04-2016 APRE_RS06085 d007ae6ffe41ed318d4913f6ad5475e9 197 Pfam PF09335 SNARE associated Golgi protein 68 183 5.8E-20 T 20-04-2016 IPR032816 SNARE associated Golgi protein APRE_RS06085 d007ae6ffe41ed318d4913f6ad5475e9 197 PANTHER PTHR12677 1 169 4.0E-13 T 20-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 Gene3D G3DSA:3.40.50.1000 1 75 1.8E-52 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 Gene3D G3DSA:3.40.50.1000 183 268 1.8E-52 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 PANTHER PTHR10000:SF16 1 269 5.8E-62 T 20-04-2016 APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 3.3E-59 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 1.8E-18 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 SUPERFAMILY SSF56784 1 267 4.26E-64 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 3.6E-56 T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 Gene3D G3DSA:3.30.1240.10 89 182 1.4E-21 T 20-04-2016 APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS07215 31eb4e0920bd356aa5ad1e7dfde03a9c 275 PANTHER PTHR10000 1 269 5.8E-62 T 20-04-2016 APRE_RS05675 c614229c95a6b4eaad07b7b2f87fc2f9 383 PANTHER PTHR23501 5 377 1.3E-47 T 20-04-2016 APRE_RS05675 c614229c95a6b4eaad07b7b2f87fc2f9 383 Gene3D G3DSA:1.20.1250.20 193 380 5.4E-13 T 20-04-2016 APRE_RS05675 c614229c95a6b4eaad07b7b2f87fc2f9 383 Gene3D G3DSA:1.20.1250.20 3 188 5.7E-24 T 20-04-2016 APRE_RS05675 c614229c95a6b4eaad07b7b2f87fc2f9 383 SUPERFAMILY SSF103473 5 379 5.75E-50 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS05675 c614229c95a6b4eaad07b7b2f87fc2f9 383 Pfam PF07690 Major Facilitator Superfamily 15 344 2.6E-33 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 ProSitePatterns PS00483 Dihydroorotase signature 2. 278 289 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 SUPERFAMILY SSF51556 53 339 2.93E-82 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 Pfam PF01979 Amidohydrolase family 48 389 3.4E-27 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 SUPERFAMILY SSF51338 2 50 4.32E-19 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 SUPERFAMILY SSF51338 338 396 4.32E-19 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 PANTHER PTHR11647:SF70 1 397 1.6E-126 T 20-04-2016 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 ProSitePatterns PS00482 Dihydroorotase signature 1. 54 62 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 Gene3D G3DSA:3.20.20.140 65 378 3.7E-87 T 20-04-2016 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 Gene3D G3DSA:2.30.40.10 15 64 6.7E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 15 395 1.7E-101 T 20-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04040 1631fb1d1f2c5437701cbbb964c6788e 397 PANTHER PTHR11647 1 397 1.6E-126 T 20-04-2016 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 Gene3D G3DSA:3.30.750.70 79 154 2.2E-7 T 20-04-2016 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 Pfam PF00455 DeoR C terminal sensor domain 76 231 1.2E-42 T 20-04-2016 IPR014036 DeoR C-terminal sensor domain APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 SUPERFAMILY SSF46785 4 60 8.15E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 PANTHER PTHR30363 1 237 1.2E-73 T 20-04-2016 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 SMART SM01134 74 233 8.7E-54 T 20-04-2016 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 SUPERFAMILY SSF100950 75 233 1.4E-27 T 20-04-2016 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 20-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.3E-17 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 PANTHER PTHR30363:SF10 1 237 1.2E-73 T 20-04-2016 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 SMART SM00420 6 58 7.9E-19 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 Gene3D G3DSA:1.10.10.10 5 59 3.5E-8 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-9 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00385 8f15d70f5afb52fd2a1ce1c5c9540c17 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-9 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 Gene3D G3DSA:3.40.50.2300 163 266 1.4E-44 T 20-04-2016 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 4.6E-35 T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS02065 c88c7aad301371062eb32009227447d3 620 Pfam PF02378 Phosphotransferase system, EIIC 298 561 2.1E-15 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 SUPERFAMILY SSF52794 167 266 2.62E-38 T 20-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 Gene3D G3DSA:3.40.930.10 2 152 1.2E-45 T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS02065 c88c7aad301371062eb32009227447d3 620 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 286 617 8.9E-113 T 20-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 170 259 1.5E-19 T 20-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 PANTHER PTHR30505:SF0 43 616 1.5E-242 T 20-04-2016 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 170 251 6.9E-32 T 20-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 SUPERFAMILY SSF55804 3 149 1.44E-36 T 20-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APRE_RS02065 c88c7aad301371062eb32009227447d3 620 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 3.4E-38 T 20-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS02065 c88c7aad301371062eb32009227447d3 620 PANTHER PTHR30505 43 616 1.5E-242 T 20-04-2016 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 Pfam PF01546 Peptidase family M20/M25/M40 75 388 2.7E-18 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 380 6.8E-78 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 Pfam PF07687 Peptidase dimerisation domain 188 279 3.2E-13 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 PIRSF PIRSF005962 2 394 4.9E-105 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 SUPERFAMILY SSF55031 188 293 7.18E-23 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 Gene3D G3DSA:3.30.70.360 188 304 9.9E-27 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 PANTHER PTHR11014:SF63 6 393 2.5E-96 T 20-04-2016 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 Gene3D G3DSA:3.40.630.10 305 393 2.6E-74 T 20-04-2016 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 Gene3D G3DSA:3.40.630.10 6 184 2.6E-74 T 20-04-2016 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 PANTHER PTHR11014 6 393 2.5E-96 T 20-04-2016 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 SUPERFAMILY SSF53187 305 393 2.63E-62 T 20-04-2016 APRE_RS02630 226023e414dc9bd5e17aec64f77725ef 394 SUPERFAMILY SSF53187 6 203 2.63E-62 T 20-04-2016 APRE_RS00080 ded51c4b60f5d515ddc6b0acdc7e7593 320 PANTHER PTHR30465:SF24 1 318 1.2E-117 T 20-04-2016 APRE_RS00080 ded51c4b60f5d515ddc6b0acdc7e7593 320 Gene3D G3DSA:1.10.3720.10 95 311 2.1E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00080 ded51c4b60f5d515ddc6b0acdc7e7593 320 PANTHER PTHR30465 1 318 1.2E-117 T 20-04-2016 APRE_RS00080 ded51c4b60f5d515ddc6b0acdc7e7593 320 SUPERFAMILY SSF161098 96 305 2.62E-19 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00080 ded51c4b60f5d515ddc6b0acdc7e7593 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 316 2.7E-39 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06965 1dec072cd805d385ba77616dc2b483a2 230 PANTHER PTHR30249:SF5 1 229 8.7E-75 T 20-04-2016 APRE_RS06965 1dec072cd805d385ba77616dc2b483a2 230 PANTHER PTHR30249 1 229 8.7E-75 T 20-04-2016 APRE_RS06965 1dec072cd805d385ba77616dc2b483a2 230 Pfam PF04172 LrgB-like family 12 223 8.3E-73 T 20-04-2016 IPR007300 CidB/LrgB family APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SUPERFAMILY SSF54991 697 793 2.22E-23 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Gene3D G3DSA:2.40.50.140 42 230 3.0E-38 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Pfam PF03483 B3/4 domain 220 392 1.6E-65 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SMART SM00874 410 479 3.2E-20 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Gene3D G3DSA:3.30.930.10 497 688 3.1E-45 T 20-04-2016 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Gene3D G3DSA:3.50.40.10 231 401 6.0E-78 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Gene3D G3DSA:3.30.56.10 1 38 1.8E-18 T 20-04-2016 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SUPERFAMILY SSF50249 36 198 8.28E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 703 794 1.3E-22 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SMART SM00873 220 393 5.7E-85 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 3.0E-221 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 PANTHER PTHR10947:SF0 2 794 1.1E-214 T 20-04-2016 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SUPERFAMILY SSF46955 411 483 1.37E-15 T 20-04-2016 IPR009061 Putative DNA-binding domain APRE_RS06865 985116ba451c270b587c03af401ea29c 795 PANTHER PTHR10947 2 794 1.1E-214 T 20-04-2016 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Pfam PF01588 Putative tRNA binding domain 46 151 1.0E-11 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SMART SM00896 702 794 6.2E-29 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SUPERFAMILY SSF56037 217 401 7.06E-68 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Gene3D G3DSA:3.30.56.20 410 483 1.2E-20 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Gene3D G3DSA:3.30.70.380 704 794 1.2E-23 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 789 38.125 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 SUPERFAMILY SSF55681 475 687 4.12E-32 T 20-04-2016 APRE_RS06865 985116ba451c270b587c03af401ea29c 795 Pfam PF03484 tRNA synthetase B5 domain 413 478 2.0E-15 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SMART SM01131 420 546 7.1E-37 T 20-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Pfam PF07085 DRTGG domain 142 245 2.3E-16 T 20-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Gene3D G3DSA:3.90.1640.10 310 426 9.0E-62 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Gene3D G3DSA:3.90.1640.10 4 70 9.0E-62 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SMART SM00116 80 125 43.0 T 20-04-2016 IPR000644 CBS domain APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SMART SM00116 259 307 0.0018 T 20-04-2016 IPR000644 CBS domain APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Gene3D G3DSA:3.10.580.10 71 132 5.0E-20 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Gene3D G3DSA:3.10.580.10 259 303 5.0E-20 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SUPERFAMILY SSF75138 138 255 4.05E-20 T 20-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Pfam PF00571 CBS domain 251 304 1.4E-8 T 20-04-2016 IPR000644 CBS domain APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Pfam PF00571 CBS domain 81 125 0.0043 T 20-04-2016 IPR000644 CBS domain APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SUPERFAMILY SSF64182 3 72 1.74E-65 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SUPERFAMILY SSF64182 310 544 1.74E-65 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Pfam PF01368 DHH family 5 385 4.7E-27 T 20-04-2016 IPR001667 DDH domain APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 PANTHER PTHR12112 1 62 1.1E-73 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 PANTHER PTHR12112 272 548 1.1E-73 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SUPERFAMILY SSF54631 68 141 1.65E-22 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 SUPERFAMILY SSF54631 228 303 1.65E-22 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Gene3D G3DSA:3.40.1390.20 136 258 9.6E-20 T 20-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 Pfam PF02833 DHHA2 domain 422 545 9.1E-15 T 20-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 PANTHER PTHR12112:SF17 1 62 1.1E-73 T 20-04-2016 APRE_RS02125 3541b355ff3097dc3a13f03b5edb464b 550 PANTHER PTHR12112:SF17 272 548 1.1E-73 T 20-04-2016 APRE_RS03425 4d17f73b4a56e203239d7f16d3733883 59 SUPERFAMILY SSF57829 1 57 8.55E-22 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APRE_RS03425 4d17f73b4a56e203239d7f16d3733883 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 19.99 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APRE_RS03425 4d17f73b4a56e203239d7f16d3733883 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 5.3E-26 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APRE_RS03425 4d17f73b4a56e203239d7f16d3733883 59 PANTHER PTHR21026 1 59 2.4E-22 T 20-04-2016 APRE_RS03425 4d17f73b4a56e203239d7f16d3733883 59 Pfam PF01783 Ribosomal L32p protein family 2 57 9.5E-25 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 PANTHER PTHR13847:SF150 2 440 3.5E-113 T 20-04-2016 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 Gene3D G3DSA:3.50.50.60 136 216 8.5E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 Gene3D G3DSA:3.50.50.60 1 82 8.5E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 Gene3D G3DSA:3.50.50.60 314 368 8.5E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 Pfam PF01266 FAD dependent oxidoreductase 3 351 1.9E-58 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 SUPERFAMILY SSF51905 1 217 1.6E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 SUPERFAMILY SSF51905 314 404 1.6E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 PANTHER PTHR13847 2 440 3.5E-113 T 20-04-2016 APRE_RS07650 def88e8cfc9923ff3ced16cd4a5dd9ee 473 Pfam PF04324 BFD-like [2Fe-2S] binding domain 395 449 1.5E-17 T 20-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 SUPERFAMILY SSF52317 17 295 1.33E-76 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 Gene3D G3DSA:3.40.50.880 34 298 1.6E-99 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 Pfam PF04204 Homoserine O-succinyltransferase 2 297 4.0E-112 T 20-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 PANTHER PTHR20919:SF0 2 303 3.1E-106 T 20-04-2016 APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 PIRSF PIRSF000450 1 306 6.6E-119 T 20-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 PANTHER PTHR20919 2 303 3.1E-106 T 20-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 288 8.0E-64 T 20-04-2016 APRE_RS01540 684f3aa19dec25781cc415f2d78c5523 306 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 299 1.2E-109 T 20-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 Pfam PF13377 Periplasmic binding protein-like domain 167 321 6.5E-25 T 20-04-2016 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 SUPERFAMILY SSF53822 57 306 5.3E-50 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 Gene3D G3DSA:3.40.50.2300 53 164 9.3E-30 T 20-04-2016 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 SMART SM00354 1 70 2.7E-26 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 Gene3D G3DSA:1.10.260.40 2 52 3.0E-22 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 Gene3D G3DSA:3.40.50.2300 165 322 2.6E-35 T 20-04-2016 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 47 3.0E-15 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 SUPERFAMILY SSF47413 1 58 1.29E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS00570 0cd6c879b71d90d6e35ca80f4088113f 322 PANTHER PTHR30146 1 322 3.0E-82 T 20-04-2016 APRE_RS05155 4a56027fb93f40b39a0eb33e5ccffecb 212 PANTHER PTHR11671:SF2 1 202 1.4E-19 T 20-04-2016 APRE_RS05155 4a56027fb93f40b39a0eb33e5ccffecb 212 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 207 6.8E-30 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS05155 4a56027fb93f40b39a0eb33e5ccffecb 212 Pfam PF01813 ATP synthase subunit D 12 202 5.0E-41 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS05155 4a56027fb93f40b39a0eb33e5ccffecb 212 PANTHER PTHR11671 1 202 1.4E-19 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 PANTHER PTHR11135 1 305 2.9E-100 T 20-04-2016 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 Gene3D G3DSA:3.80.30.20 24 244 2.8E-27 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 306 4.5E-87 T 20-04-2016 IPR005911 Protein YhcC-like GO:0051536 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 SUPERFAMILY SSF102114 12 259 7.72E-38 T 20-04-2016 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 Pfam PF04055 Radical SAM superfamily 44 203 7.0E-11 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 SMART SM00729 24 243 1.5E-23 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 PANTHER PTHR11135:SF1 1 305 2.9E-100 T 20-04-2016 IPR005911 Protein YhcC-like GO:0051536 APRE_RS07205 3ec4b2f341ec755803b9bb5e100de94b 309 Pfam PF16199 Radical_SAM C-terminal domain 212 294 7.8E-18 T 20-04-2016 IPR032432 Radical SAM, C-terminal extension APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 Gene3D G3DSA:3.30.70.790 79 144 7.8E-13 T 20-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 Gene3D G3DSA:2.60.260.20 2 75 5.0E-19 T 20-04-2016 APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 Pfam PF05194 UreE urease accessory protein, C-terminal domain 81 170 5.8E-14 T 20-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 Pfam PF02814 UreE urease accessory protein, N-terminal domain 19 68 5.1E-7 T 20-04-2016 IPR004029 UreE urease accessory, N-terminal APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 SUPERFAMILY SSF69737 81 145 3.01E-9 T 20-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 SUPERFAMILY SSF69287 2 75 2.09E-10 T 20-04-2016 IPR004029 UreE urease accessory, N-terminal APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 PIRSF PIRSF036402 1 170 2.8E-25 T 20-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APRE_RS03735 a0db7bfd23a4addb284506bec5915d7f 171 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 148 14.806 T 20-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 PANTHER PTHR24220 3 238 6.5E-93 T 20-04-2016 APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 Pfam PF13732 Domain of unknown function (DUF4162) 210 292 2.1E-12 T 20-04-2016 IPR025302 Domain of unknown function DUF4162 APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 SUPERFAMILY SSF52540 1 219 7.71E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 Pfam PF00005 ABC transporter 17 156 2.9E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 Gene3D G3DSA:3.40.50.300 1 218 9.0E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 PANTHER PTHR24220:SF450 3 238 6.5E-93 T 20-04-2016 APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01270 c801088ed3017746b36ddf81e335d758 296 SMART SM00382 26 204 5.1E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08510 bedd453d23b2d637065a624900c50677 391 SUPERFAMILY SSF56059 107 315 1.77E-17 T 20-04-2016 APRE_RS08510 bedd453d23b2d637065a624900c50677 391 Gene3D G3DSA:3.30.470.20 208 326 8.9E-14 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 PIRSF PIRSF003095 1 446 2.3E-114 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 SUPERFAMILY SSF54534 88 241 1.87E-31 T 20-04-2016 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 PANTHER PTHR30560 8 437 2.3E-109 T 20-04-2016 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 TIGRFAM TIGR00115 tig: trigger factor 12 422 1.4E-127 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 SUPERFAMILY SSF109998 249 427 6.57E-39 T 20-04-2016 IPR027304 Trigger factor/SurA domain APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 Pfam PF05697 Bacterial trigger factor protein (TF) 4 143 2.1E-36 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 238 9.6E-16 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 Gene3D G3DSA:1.10.3120.10 205 391 1.8E-54 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 423 2.6E-36 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 Gene3D G3DSA:3.30.70.1050 3 117 6.8E-30 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 SUPERFAMILY SSF102735 4 128 2.62E-30 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APRE_RS02015 d18c717466a709d70e38f0610cb2940d 451 Hamap MF_00303 Trigger factor [tig]. 1 429 20.931 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Gene3D G3DSA:1.10.3710.10 342 425 1.9E-22 T 20-04-2016 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Gene3D G3DSA:3.40.50.300 13 156 2.7E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06100 1e9704948e3761556667f9756519e25c 428 SMART SM00382 51 209 3.7E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06100 1e9704948e3761556667f9756519e25c 428 SUPERFAMILY SSF48019 253 421 4.08E-57 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 PANTHER PTHR13779 4 423 8.1E-166 T 20-04-2016 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Pfam PF16193 AAA C-terminal domain 190 268 1.2E-23 T 20-04-2016 IPR032423 AAA ATPase, C-terminal domain APRE_RS06100 1e9704948e3761556667f9756519e25c 428 PANTHER PTHR13779:SF7 4 423 8.1E-166 T 20-04-2016 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 143 4.4E-19 T 20-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 SUPERFAMILY SSF52540 15 223 9.25E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 422 7.8E-51 T 20-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Gene3D G3DSA:1.20.272.10 250 341 4.0E-40 T 20-04-2016 APRE_RS06100 1e9704948e3761556667f9756519e25c 428 Gene3D G3DSA:1.10.8.60 157 227 2.3E-8 T 20-04-2016 APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 166 5.7E-63 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 PANTHER PTHR13718 13 167 9.4E-66 T 20-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 78 5.0E-31 T 20-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 160 5.9E-27 T 20-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 Gene3D G3DSA:3.30.160.20 13 75 8.2E-31 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 Gene3D G3DSA:3.30.230.10 79 162 8.9E-30 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 SUPERFAMILY SSF54211 83 162 2.1E-23 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 20-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 32.699 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APRE_RS07985 a0a81bd1c2ac4d00889a96bac3eb2365 169 SUPERFAMILY SSF54768 11 79 4.71E-24 T 20-04-2016 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 407 418 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 368 379 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 439 130.25 T 20-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 103 7.8E-28 T 20-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 SUPERFAMILY SSF46548 325 436 1.57E-19 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 Pfam PF13183 4Fe-4S dicluster domain 365 420 1.7E-9 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 Pfam PF10531 SLBB domain 289 337 1.6E-9 T 20-04-2016 IPR019554 Soluble ligand binding domain APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 436 1.1E-147 T 20-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 127 277 4.3E-51 T 20-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 Gene3D G3DSA:1.10.1060.10 357 437 5.1E-16 T 20-04-2016 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 PANTHER PTHR11780:SF1 1 436 8.2E-149 T 20-04-2016 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 SUPERFAMILY SSF142019 94 296 2.09E-57 T 20-04-2016 APRE_RS06730 085fa15eacdc104a18da9a651fb62583 439 PANTHER PTHR11780 1 436 8.2E-149 T 20-04-2016 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 474 42.991 T 20-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 PANTHER PTHR12526 1 474 3.6E-130 T 20-04-2016 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 474 3.2E-161 T 20-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 SUPERFAMILY SSF53756 3 476 1.12E-116 T 20-04-2016 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 Gene3D G3DSA:3.40.50.2000 249 454 1.5E-67 T 20-04-2016 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 PANTHER PTHR12526:SF17 1 474 3.6E-130 T 20-04-2016 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 Pfam PF08323 Starch synthase catalytic domain 2 235 1.5E-79 T 20-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04455 84b13555fb849a22fadeed43d8246b0a 477 Pfam PF00534 Glycosyl transferases group 1 287 442 1.8E-12 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 SUPERFAMILY SSF50447 3 208 4.77E-72 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS08070 24119cf50597b640908ce774033d54ab 209 PANTHER PTHR11229 4 208 6.9E-96 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 20-04-2016 IPR019926 Ribosomal protein L3, conserved site APRE_RS08070 24119cf50597b640908ce774033d54ab 209 Gene3D G3DSA:4.10.960.10 86 157 3.6E-25 T 20-04-2016 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 Pfam PF00297 Ribosomal protein L3 98 181 1.8E-14 T 20-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 Gene3D G3DSA:2.40.30.10 158 208 5.8E-13 T 20-04-2016 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 Gene3D G3DSA:2.40.30.10 3 45 5.8E-13 T 20-04-2016 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 35.871 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08070 24119cf50597b640908ce774033d54ab 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 5.6E-77 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03910 6ce672e00019064cd14b37d0ee5ee393 209 SUPERFAMILY SSF53271 4 207 2.49E-72 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS03910 6ce672e00019064cd14b37d0ee5ee393 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.067 T 20-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APRE_RS03910 6ce672e00019064cd14b37d0ee5ee393 209 Gene3D G3DSA:3.40.50.2020 4 209 1.8E-82 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS03910 6ce672e00019064cd14b37d0ee5ee393 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.5E-76 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS03910 6ce672e00019064cd14b37d0ee5ee393 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 1.1E-90 T 20-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APRE_RS03910 6ce672e00019064cd14b37d0ee5ee393 209 PANTHER PTHR10285 2 198 1.7E-95 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PANTHER PTHR19375:SF117 5 315 1.4E-116 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 SUPERFAMILY SSF53067 5 141 5.06E-34 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 Gene3D G3DSA:3.90.640.10 180 247 4.6E-16 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 326 3.2E-110 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 180 200 1.0E-43 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 63 86 1.0E-43 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 43 61 1.0E-43 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 125 144 1.0E-43 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 290 316 1.0E-43 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 Pfam PF06723 MreB/Mbl protein 6 325 5.2E-118 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 PANTHER PTHR19375 5 315 1.4E-116 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 Gene3D G3DSA:3.30.420.40 5 153 1.1E-39 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 Gene3D G3DSA:3.30.420.40 253 306 5.5E-27 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 Gene3D G3DSA:3.30.420.40 154 179 5.5E-27 T 20-04-2016 APRE_RS00910 6e12058c4f174d3d7ce3286616787afc 349 SUPERFAMILY SSF53067 143 321 8.64E-37 T 20-04-2016 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 Gene3D G3DSA:1.10.275.10 2 132 1.4E-54 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 Gene3D G3DSA:1.20.200.10 133 409 3.6E-84 T 20-04-2016 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 Pfam PF00206 Lyase 11 335 5.1E-98 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 6.4E-6 T 20-04-2016 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 6.4E-6 T 20-04-2016 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 SUPERFAMILY SSF48557 3 454 2.98E-135 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PANTHER PTHR11444:SF1 1 454 5.2E-201 T 20-04-2016 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 454 74.726 T 20-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PANTHER PTHR11444 1 454 5.2E-201 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 4.4E-29 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 4.4E-29 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 4.4E-29 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 4.4E-29 T 20-04-2016 IPR000362 Fumarate lyase family APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 Gene3D G3DSA:1.10.40.30 410 454 2.5E-21 T 20-04-2016 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APRE_RS00480 a5b56adb9a88e6584ccd5894d02001af 454 Pfam PF10415 Fumarase C C-terminus 402 454 7.5E-17 T 20-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APRE_RS08250 2dfffcc0f15d8e704853c2c58295047b 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 416 3.0E-109 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APRE_RS08250 2dfffcc0f15d8e704853c2c58295047b 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 418 2.5E-129 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APRE_RS08250 2dfffcc0f15d8e704853c2c58295047b 429 PANTHER PTHR33362 1 424 2.2E-154 T 20-04-2016 APRE_RS08250 2dfffcc0f15d8e704853c2c58295047b 429 PIRSF PIRSF006066 1 427 1.3E-127 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APRE_RS08250 2dfffcc0f15d8e704853c2c58295047b 429 PANTHER PTHR33362:SF9 1 424 2.2E-154 T 20-04-2016 APRE_RS05605 082aec40531464d900abb729b0298a86 355 SUPERFAMILY SSF52096 253 327 2.88E-42 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS05605 082aec40531464d900abb729b0298a86 355 SUPERFAMILY SSF52096 4 185 2.88E-42 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS05605 082aec40531464d900abb729b0298a86 355 Gene3D G3DSA:3.90.226.10 7 195 1.8E-43 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS05605 082aec40531464d900abb729b0298a86 355 PANTHER PTHR11941:SF53 2 185 3.6E-67 T 20-04-2016 APRE_RS05605 082aec40531464d900abb729b0298a86 355 PANTHER PTHR11941:SF53 248 326 3.6E-67 T 20-04-2016 APRE_RS05605 082aec40531464d900abb729b0298a86 355 PANTHER PTHR11941 2 185 3.6E-67 T 20-04-2016 APRE_RS05605 082aec40531464d900abb729b0298a86 355 PANTHER PTHR11941 248 326 3.6E-67 T 20-04-2016 APRE_RS05605 082aec40531464d900abb729b0298a86 355 Pfam PF16113 Enoyl-CoA hydratase/isomerase 10 342 5.9E-92 T 20-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 PANTHER PTHR24031:SF249 281 569 3.3E-93 T 20-04-2016 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 PANTHER PTHR24031:SF249 10 43 3.3E-93 T 20-04-2016 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 PANTHER PTHR24031:SF249 182 264 3.3E-93 T 20-04-2016 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 SUPERFAMILY SSF50249 2 166 5.82E-26 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 SUPERFAMILY SSF52540 298 574 6.0E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 PANTHER PTHR24031 281 569 3.3E-93 T 20-04-2016 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 PANTHER PTHR24031 10 43 3.3E-93 T 20-04-2016 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 PANTHER PTHR24031 182 264 3.3E-93 T 20-04-2016 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 Gene3D G3DSA:3.40.50.300 431 605 8.0E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 SMART SM00490 477 561 1.4E-24 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 SMART SM00487 247 435 1.5E-26 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 Pfam PF00271 Helicase conserved C-terminal domain 442 560 2.3E-25 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 Pfam PF17191 RecG wedge domain 6 164 4.8E-25 T 20-04-2016 IPR033454 RecG, wedge domain APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 Pfam PF00270 DEAD/DEAH box helicase 252 387 2.7E-16 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APRE_RS05305 fa40c40e9fa8945f1d7e9ede67728c50 663 Gene3D G3DSA:3.40.50.300 240 430 5.4E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02710 cec55708e5bb50328ff2173df80f609a 341 SUPERFAMILY SSF53335 2 144 4.43E-5 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS02710 cec55708e5bb50328ff2173df80f609a 341 Gene3D G3DSA:3.40.50.150 2 122 2.4E-4 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS02710 cec55708e5bb50328ff2173df80f609a 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 7 13 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APRE_RS02710 cec55708e5bb50328ff2173df80f609a 341 Pfam PF07669 Eco57I restriction-modification methylase 3 100 5.1E-23 T 20-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 APRE_RS08190 a25284f0f3ac6effefa18d7bbc00fbf3 341 Gene3D G3DSA:3.40.1190.20 2 335 4.3E-95 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS08190 a25284f0f3ac6effefa18d7bbc00fbf3 341 PANTHER PTHR10584:SF203 1 331 2.6E-118 T 20-04-2016 APRE_RS08190 a25284f0f3ac6effefa18d7bbc00fbf3 341 Pfam PF00294 pfkB family carbohydrate kinase 3 316 1.7E-42 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APRE_RS08190 a25284f0f3ac6effefa18d7bbc00fbf3 341 PANTHER PTHR10584 1 331 2.6E-118 T 20-04-2016 APRE_RS08190 a25284f0f3ac6effefa18d7bbc00fbf3 341 SUPERFAMILY SSF53613 2 330 6.24E-87 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS00865 614497a225368478acab5e05c690f838 123 PANTHER PTHR38445:SF2 1 118 4.6E-15 T 20-04-2016 APRE_RS00865 614497a225368478acab5e05c690f838 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 3.1E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00865 614497a225368478acab5e05c690f838 123 Gene3D G3DSA:1.10.10.10 2 74 7.1E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00865 614497a225368478acab5e05c690f838 123 PANTHER PTHR38445 1 118 4.6E-15 T 20-04-2016 APRE_RS00865 614497a225368478acab5e05c690f838 123 SMART SM00345 13 72 6.7E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00865 614497a225368478acab5e05c690f838 123 SUPERFAMILY SSF46785 2 82 3.54E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 Gene3D G3DSA:3.50.50.60 87 279 2.3E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 Gene3D G3DSA:3.50.50.60 459 511 2.3E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 PIRSF PIRSF038984 1 512 1.0E-174 T 20-04-2016 IPR028348 FAD dependent protein APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 Pfam PF13450 NAD(P)-binding Rossmann-like domain 91 121 3.6E-8 T 20-04-2016 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 PANTHER PTHR10617:SF52 454 509 7.3E-120 T 20-04-2016 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 PANTHER PTHR10617:SF52 62 374 7.3E-120 T 20-04-2016 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 SUPERFAMILY SSF51905 455 510 1.51E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 SUPERFAMILY SSF51905 88 281 1.51E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 PANTHER PTHR10617 454 509 7.3E-120 T 20-04-2016 APRE_RS05505 d5be150113602f13ba8566e1d044a099 512 PANTHER PTHR10617 62 374 7.3E-120 T 20-04-2016 APRE_RS04230 e89670ab5db3deca1ba7654858c98602 322 Gene3D G3DSA:3.20.20.70 61 279 2.8E-8 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS04230 e89670ab5db3deca1ba7654858c98602 322 SUPERFAMILY SSF102114 61 280 1.44E-5 T 20-04-2016 APRE_RS04230 e89670ab5db3deca1ba7654858c98602 322 PANTHER PTHR30544:SF7 45 307 4.7E-12 T 20-04-2016 APRE_RS04230 e89670ab5db3deca1ba7654858c98602 322 PANTHER PTHR30544 45 307 4.7E-12 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Pfam PF07478 D-ala D-ala ligase C-terminus 137 336 2.5E-55 T 20-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 PANTHER PTHR23132 2 345 1.3E-92 T 20-04-2016 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Gene3D G3DSA:3.30.1490.20 152 209 9.1E-22 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Gene3D G3DSA:3.40.50.20 2 118 3.8E-28 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 2 340 33.992 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 SUPERFAMILY SSF52440 2 128 1.06E-29 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 PANTHER PTHR23132:SF8 2 345 1.3E-92 T 20-04-2016 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Pfam PF01820 D-ala D-ala ligase N-terminus 3 118 4.2E-25 T 20-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 SUPERFAMILY SSF56059 129 340 3.16E-48 T 20-04-2016 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 337 1.3E-91 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 96 107 - T 20-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Gene3D G3DSA:3.30.470.20 119 136 3.6E-38 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 Gene3D G3DSA:3.30.470.20 210 338 3.6E-38 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS02325 e4c6dc7632a24dca600086a3bcf8d3a0 345 PIRSF PIRSF039102 1 345 5.6E-94 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 SUPERFAMILY SSF116878 377 452 3.14E-40 T 20-04-2016 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 SUPERFAMILY SSF116878 127 225 3.14E-40 T 20-04-2016 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 452 4.8E-116 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 126 3.4E-36 T 20-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Pfam PF12631 MnmE helical domain 129 449 1.1E-51 T 20-04-2016 IPR025867 MnmE, helical domain APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Gene3D G3DSA:1.20.120.430 128 188 1.2E-44 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Gene3D G3DSA:1.20.120.430 244 276 1.2E-44 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Gene3D G3DSA:1.20.120.430 384 452 1.2E-44 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 SUPERFAMILY SSF52540 80 158 5.26E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 SUPERFAMILY SSF52540 193 370 5.26E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 452 31.581 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 PANTHER PTHR11649 7 452 4.2E-133 T 20-04-2016 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Gene3D G3DSA:3.40.50.300 292 383 1.0E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Pfam PF01926 50S ribosome-binding GTPase 225 336 1.1E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 PANTHER PTHR11649:SF56 7 452 4.2E-133 T 20-04-2016 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 Gene3D G3DSA:3.30.1360.120 2 127 3.1E-40 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APRE_RS08845 741d219bdfa186bd0a8f04942c70dafc 452 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 351 1.0E-22 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS08130 194aa40ced327b169619467ff6619082 110 PANTHER PTHR34382 1 109 1.6E-31 T 20-04-2016 APRE_RS08130 194aa40ced327b169619467ff6619082 110 Gene3D G3DSA:1.20.58.80 3 104 3.0E-34 T 20-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS08130 194aa40ced327b169619467ff6619082 110 PIRSF PIRSF000699 1 108 1.7E-32 T 20-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS08130 194aa40ced327b169619467ff6619082 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 101 2.0E-32 T 20-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS08130 194aa40ced327b169619467ff6619082 110 SUPERFAMILY SSF46973 2 102 1.57E-31 T 20-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS08130 194aa40ced327b169619467ff6619082 110 PANTHER PTHR34382:SF2 1 109 1.6E-31 T 20-04-2016 APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 PIRSF PIRSF002211 1 60 5.3E-25 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 Pfam PF00327 Ribosomal protein L30p/L7e 5 53 8.8E-16 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.7E-23 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 SUPERFAMILY SSF55129 4 58 6.93E-18 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 Gene3D G3DSA:3.30.1390.20 1 58 5.6E-26 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 PANTHER PTHR15892 1 60 3.3E-19 T 20-04-2016 APRE_RS07980 0d99d4668a505f0ecce8693fdc64dd5e 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 17.429 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 259 1.6E-71 T 20-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 PANTHER PTHR18895 10 261 7.3E-84 T 20-04-2016 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 PANTHER PTHR18895:SF64 10 261 7.3E-84 T 20-04-2016 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 261 36.949 T 20-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 SUPERFAMILY SSF53335 15 259 6.57E-53 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 Pfam PF13847 Methyltransferase domain 96 236 2.2E-22 T 20-04-2016 IPR025714 Methyltransferase domain APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 16 257 7.3E-82 T 20-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 Gene3D G3DSA:3.40.50.150 74 261 1.1E-62 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 166 172 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APRE_RS03890 7e2a9fb97c2f7ab4658b80d5acb7cba3 262 Gene3D G3DSA:1.10.8.10 16 72 2.0E-11 T 20-04-2016 APRE_RS02920 8f2500afaba2c1ac81c71bc769b4520d 158 Pfam PF12821 Threonine/Serine exporter, ThrE 5 132 2.0E-34 T 20-04-2016 IPR024528 Threonine/Serine exporter, ThrE APRE_RS02920 8f2500afaba2c1ac81c71bc769b4520d 158 PANTHER PTHR34390 1 158 4.6E-31 T 20-04-2016 APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 Pfam PF00005 ABC transporter 27 166 6.2E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 SUPERFAMILY SSF52540 4 228 1.07E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 PANTHER PTHR24220:SF581 7 234 1.9E-109 T 20-04-2016 APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 PANTHER PTHR24220 7 234 1.9E-109 T 20-04-2016 APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 Gene3D G3DSA:3.40.50.300 3 231 1.9E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03645 25576ea01ab74bd6ec502eaee88a30b3 236 SMART SM00382 30 215 1.2E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06430 a31563bd683d1ae44b5bce997653c9b8 400 Gene3D G3DSA:3.40.50.20 3 106 4.0E-10 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS06430 a31563bd683d1ae44b5bce997653c9b8 400 PANTHER PTHR23132 94 357 5.5E-13 T 20-04-2016 APRE_RS06430 a31563bd683d1ae44b5bce997653c9b8 400 SUPERFAMILY SSF56059 106 307 8.92E-38 T 20-04-2016 APRE_RS06430 a31563bd683d1ae44b5bce997653c9b8 400 SMART SM01209 105 246 1.2E-5 T 20-04-2016 APRE_RS06430 a31563bd683d1ae44b5bce997653c9b8 400 Gene3D G3DSA:3.30.470.20 107 387 3.9E-34 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS06430 a31563bd683d1ae44b5bce997653c9b8 400 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 106 210 7.7E-15 T 20-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 SUPERFAMILY SSF52540 4 195 7.2E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 175 2.1E-34 T 20-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 2 200 44.01 T 20-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 3 200 3.1E-94 T 20-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 PIRSF PIRSF005624 1 202 1.3E-48 T 20-04-2016 APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 PANTHER PTHR31715 5 203 1.5E-102 T 20-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APRE_RS03745 3194b4d9423ca10f792f729e6d0b5a19 203 Gene3D G3DSA:3.40.50.300 6 195 8.1E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 415 1.1E-21 T 20-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 Pfam PF00591 Glycosyl transferase family, a/b domain 79 306 5.9E-47 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 SMART SM00941 345 418 5.8E-25 T 20-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 SUPERFAMILY SSF47648 1 69 1.96E-20 T 20-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 PANTHER PTHR10515:SF0 1 433 2.7E-198 T 20-04-2016 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 PIRSF PIRSF000478 1 432 3.2E-165 T 20-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 SUPERFAMILY SSF52418 69 329 1.96E-93 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 414 4.0E-176 T 20-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 20-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 Gene3D G3DSA:1.20.970.10 1 67 3.6E-29 T 20-04-2016 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 Gene3D G3DSA:3.40.1030.10 70 333 7.7E-115 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 PANTHER PTHR10515 1 433 2.7E-198 T 20-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 SUPERFAMILY SSF54680 331 432 8.11E-26 T 20-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 6.5E-24 T 20-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APRE_RS00195 0d1029bf5f4cab16fc3b71d9a44392a3 433 Gene3D G3DSA:3.90.1170.30 334 422 1.4E-27 T 20-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 Gene3D G3DSA:3.60.15.10 2 246 2.9E-81 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 ProSitePatterns PS00201 Flavodoxin signature. 257 273 - T 20-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 PANTHER PTHR32145 2 405 3.9E-216 T 20-04-2016 APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 PIRSF PIRSF005243 1 404 3.3E-120 T 20-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 Pfam PF00753 Metallo-beta-lactamase superfamily 36 169 1.2E-6 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 SUPERFAMILY SSF52218 252 363 1.01E-22 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 Gene3D G3DSA:3.40.50.360 250 393 2.3E-37 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 PANTHER PTHR32145:SF20 2 405 3.9E-216 T 20-04-2016 APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 SMART SM00849 35 227 6.9E-23 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 SUPERFAMILY SSF56281 4 285 3.41E-48 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS00430 8a3cf234015c2aab5b4571a789c16895 414 Pfam PF12724 Flavodoxin domain 256 365 4.9E-7 T 20-04-2016 IPR026816 Flavodoxin domain APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 PANTHER PTHR24221 55 620 9.3E-92 T 20-04-2016 APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 Gene3D G3DSA:1.20.1560.10 168 341 8.4E-11 T 20-04-2016 APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 Pfam PF00005 ABC transporter 387 541 4.5E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 SUPERFAMILY SSF90123 53 337 7.85E-17 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 SMART SM00382 396 586 1.5E-16 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 SUPERFAMILY SSF52540 367 611 4.17E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 Gene3D G3DSA:3.40.50.300 370 619 3.8E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07785 ec47320f61bc02f118d78feee398619c 622 PANTHER PTHR24221:SF138 55 620 9.3E-92 T 20-04-2016 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Gene3D G3DSA:3.90.190.20 321 460 2.0E-45 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Gene3D G3DSA:3.40.50.720 13 98 5.3E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Gene3D G3DSA:3.40.1190.10 100 320 2.9E-57 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 452 8.3E-132 T 20-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 SUPERFAMILY SSF53623 106 315 6.93E-52 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 SUPERFAMILY SSF51984 12 98 6.15E-26 T 20-04-2016 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Pfam PF01225 Mur ligase family, catalytic domain 14 111 2.5E-22 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 SUPERFAMILY SSF53244 317 459 6.59E-40 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 11 462 33.897 T 20-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 PANTHER PTHR23135:SF5 6 450 1.0E-149 T 20-04-2016 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 PANTHER PTHR23135 6 450 1.0E-149 T 20-04-2016 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 401 1.7E-19 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS04970 62a81d212adca5a35525ce5ae8455567 462 Pfam PF08245 Mur ligase middle domain 117 297 9.3E-26 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Pfam PF03764 Elongation factor G, domain IV 473 588 1.4E-38 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SMART SM00889 473 589 5.4E-60 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PANTHER PTHR23115:SF98 1 176 5.7E-259 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PANTHER PTHR23115:SF98 249 276 5.7E-259 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PANTHER PTHR23115:SF98 296 682 5.7E-259 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Gene3D G3DSA:3.40.50.300 3 276 8.2E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Gene3D G3DSA:3.30.70.240 590 676 1.8E-29 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PANTHER PTHR23115 1 176 5.7E-259 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PANTHER PTHR23115 249 276 5.7E-259 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PANTHER PTHR23115 296 682 5.7E-259 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SUPERFAMILY SSF54980 397 474 5.04E-18 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SUPERFAMILY SSF54211 475 590 1.16E-39 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Pfam PF00679 Elongation factor G C-terminus 591 676 1.9E-27 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PRINTS PR00315 GTP-binding elongation factor signature 57 65 2.0E-6 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.0E-6 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.0E-6 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.0E-6 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Gene3D G3DSA:3.30.230.10 477 589 1.4E-42 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SUPERFAMILY SSF54980 594 680 2.01E-24 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SUPERFAMILY SSF50447 260 396 4.8E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SUPERFAMILY SSF52540 4 275 2.79E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Pfam PF00009 Elongation factor Tu GTP binding domain 8 275 4.2E-44 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Pfam PF03144 Elongation factor Tu domain 2 317 383 8.3E-8 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Gene3D G3DSA:2.40.30.10 299 397 4.7E-29 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Gene3D G3DSA:3.30.70.870 398 469 1.3E-24 T 20-04-2016 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 179 1.9E-20 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 Pfam PF14492 Elongation Factor G, domain II 398 469 5.0E-26 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS01040 dda4856522e24bde55a1fee9267907e9 682 SMART SM00838 591 679 2.2E-39 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS07030 1c3de7f3ede060cf994dae9c61d25fe6 301 Gene3D G3DSA:3.40.50.300 43 207 3.4E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07030 1c3de7f3ede060cf994dae9c61d25fe6 301 PANTHER PTHR22908 44 278 1.1E-23 T 20-04-2016 APRE_RS07030 1c3de7f3ede060cf994dae9c61d25fe6 301 Pfam PF07728 AAA domain (dynein-related subfamily) 58 190 5.5E-23 T 20-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APRE_RS07030 1c3de7f3ede060cf994dae9c61d25fe6 301 PANTHER PTHR22908:SF58 44 278 1.1E-23 T 20-04-2016 APRE_RS07030 1c3de7f3ede060cf994dae9c61d25fe6 301 SUPERFAMILY SSF52540 43 257 6.64E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 SUPERFAMILY SSF53187 10 188 2.49E-46 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 SUPERFAMILY SSF53187 341 437 2.49E-46 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 Pfam PF07687 Peptidase dimerisation domain 186 307 5.4E-19 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 78 87 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 SUPERFAMILY SSF55031 188 235 1.45E-11 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 SUPERFAMILY SSF55031 260 307 1.45E-11 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 PANTHER PTHR11014 379 445 5.1E-169 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 PANTHER PTHR11014 7 363 5.1E-169 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 Pfam PF01546 Peptidase family M20/M25/M40 79 436 8.4E-22 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 Gene3D G3DSA:3.40.630.10 14 195 2.8E-50 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 Gene3D G3DSA:3.40.630.10 336 436 2.8E-50 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 Gene3D G3DSA:3.30.70.360 196 319 1.8E-17 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 PANTHER PTHR11014:SF116 379 445 5.1E-169 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 PANTHER PTHR11014:SF116 7 363 5.1E-169 T 20-04-2016 APRE_RS07355 7831ffc836e798d7e2609b0b2bb180fa 445 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 9 441 7.7E-189 T 20-04-2016 IPR017706 Peptidase M20/DapE, YgeY APRE_RS06755 61af4e141bbf44b826100c64b23deb71 355 SUPERFAMILY SSF53448 4 237 1.55E-18 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS06755 61af4e141bbf44b826100c64b23deb71 355 Pfam PF00535 Glycosyl transferase family 2 6 150 9.0E-12 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APRE_RS06755 61af4e141bbf44b826100c64b23deb71 355 Pfam PF04138 GtrA-like protein 231 352 5.2E-12 T 20-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 APRE_RS06755 61af4e141bbf44b826100c64b23deb71 355 PANTHER PTHR10859 1 291 9.8E-58 T 20-04-2016 APRE_RS06755 61af4e141bbf44b826100c64b23deb71 355 Gene3D G3DSA:3.90.550.10 7 141 1.8E-4 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS06755 61af4e141bbf44b826100c64b23deb71 355 PANTHER PTHR10859:SF84 1 291 9.8E-58 T 20-04-2016 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 SUPERFAMILY SSF56194 194 298 1.96E-33 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 Gene3D G3DSA:3.30.465.10 86 225 6.3E-46 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 PANTHER PTHR21071:SF4 1 299 2.0E-106 T 20-04-2016 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 Gene3D G3DSA:3.90.78.10 226 298 1.6E-28 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 198 297 2.8E-27 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 SUPERFAMILY SSF56176 21 208 4.3E-45 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 Pfam PF01565 FAD binding domain 34 159 9.3E-22 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 Gene3D G3DSA:3.30.43.10 13 84 4.1E-24 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 300 84.019 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 PANTHER PTHR21071 1 299 2.0E-106 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS03500 4d071ee1192f1aae3b7f7996aa43c628 300 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 298 9.9E-74 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 487 9.9E-170 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PANTHER PTHR11451 2 343 6.5E-110 T 20-04-2016 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 SUPERFAMILY SSF52374 4 322 3.43E-110 T 20-04-2016 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PANTHER PTHR11451:SF26 2 343 6.5E-110 T 20-04-2016 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Gene3D G3DSA:1.10.10.350 393 487 3.8E-17 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 SUPERFAMILY SSF48163 324 489 2.49E-36 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Gene3D G3DSA:3.90.800.10 70 204 7.0E-40 T 20-04-2016 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 330 4.5E-108 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Gene3D G3DSA:1.10.1160.10 256 339 7.7E-33 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 490 33.273 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Gene3D G3DSA:3.40.50.620 205 254 8.9E-52 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 Gene3D G3DSA:3.40.50.620 4 69 8.9E-52 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 213 1.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 219 227 1.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APRE_RS08425 f3598c8272b9b7d727fd1607257bcc74 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 SUPERFAMILY SSF48024 7 117 3.66E-26 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 Gene3D G3DSA:1.10.860.10 9 110 3.2E-24 T 20-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 Pfam PF03796 DnaB-like helicase C terminal domain 183 435 6.9E-99 T 20-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 SUPERFAMILY SSF52540 181 251 4.33E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 SUPERFAMILY SSF52540 278 427 4.33E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 437 1.3E-151 T 20-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 PANTHER PTHR30153 3 443 4.0E-156 T 20-04-2016 APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 Pfam PF00772 DnaB-like helicase N terminal domain 9 109 3.3E-25 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APRE_RS02820 115498a11909cf8ddc7df684bcdba5bd 443 Gene3D G3DSA:3.40.50.300 168 437 1.4E-91 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04570 133af4f51fd6fc55883fddf3e5912d97 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 299 2.0E-58 T 20-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS04570 133af4f51fd6fc55883fddf3e5912d97 318 SUPERFAMILY SSF55120 78 293 6.99E-48 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS04570 133af4f51fd6fc55883fddf3e5912d97 318 PANTHER PTHR11079 1 317 2.6E-46 T 20-04-2016 APRE_RS04570 133af4f51fd6fc55883fddf3e5912d97 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS04570 133af4f51fd6fc55883fddf3e5912d97 318 Pfam PF00849 RNA pseudouridylate synthase 92 245 3.7E-28 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS04570 133af4f51fd6fc55883fddf3e5912d97 318 PANTHER PTHR11079:SF83 1 317 2.6E-46 T 20-04-2016 APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 SUPERFAMILY SSF52540 343 583 4.22E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 Gene3D G3DSA:3.40.50.300 344 576 8.2E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 SMART SM00382 370 559 3.8E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 Pfam PF00005 ABC transporter 362 513 1.9E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 SUPERFAMILY SSF90123 17 311 2.35E-14 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 SUPERFAMILY SSF90123 489 497 2.35E-14 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 PANTHER PTHR24222 3 585 7.3E-73 T 20-04-2016 APRE_RS07790 0a94638dadb202c7f6f3bd92a3e17601 588 Gene3D G3DSA:1.20.1560.10 17 310 1.5E-5 T 20-04-2016 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 Gene3D G3DSA:3.30.30.80 1 57 7.7E-20 T 20-04-2016 IPR032782 Jag, N-terminal APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 SUPERFAMILY SSF82708 225 272 2.35E-8 T 20-04-2016 IPR001374 R3H domain GO:0003676 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 Pfam PF01424 R3H domain 216 272 1.6E-13 T 20-04-2016 IPR001374 R3H domain GO:0003676 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 Pfam PF13083 KH domain 133 203 6.7E-10 T 20-04-2016 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 SMART SM00393 196 275 1.7E-14 T 20-04-2016 IPR001374 R3H domain GO:0003676 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 PANTHER PTHR35800 124 276 6.4E-38 T 20-04-2016 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 PANTHER PTHR35800 3 57 6.4E-38 T 20-04-2016 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 Gene3D G3DSA:3.30.1370.50 208 275 2.9E-22 T 20-04-2016 IPR001374 R3H domain GO:0003676 APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 Pfam PF14804 Jag N-terminus 8 57 3.3E-19 T 20-04-2016 IPR032782 Jag, N-terminal APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 SMART SM01245 6 58 1.5E-20 T 20-04-2016 IPR032782 Jag, N-terminal APRE_RS08855 42e3c44a4fe18fd1b019bd33f8a0fee1 276 Gene3D G3DSA:3.30.300.120 129 206 2.9E-13 T 20-04-2016 APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 Hamap MF_00328 Guanylate kinase [gmk]. 2 185 36.249 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 PANTHER PTHR23117 1 192 2.1E-93 T 20-04-2016 APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 SMART SM00072 3 185 8.9E-66 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 SUPERFAMILY SSF52540 3 188 6.08E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 PANTHER PTHR23117:SF13 1 192 2.1E-93 T 20-04-2016 APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 182 8.8E-74 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 Pfam PF00625 Guanylate kinase 6 183 1.1E-49 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 Gene3D G3DSA:3.40.50.300 86 191 5.9E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 Gene3D G3DSA:3.40.50.300 1 26 5.9E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 Gene3D G3DSA:3.30.63.10 33 85 4.0E-26 T 20-04-2016 APRE_RS04915 8d660c71b4b52200d40c3e2ae2c49379 202 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 20-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 SUPERFAMILY SSF51905 2 162 3.02E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 SUPERFAMILY SSF51905 238 318 3.02E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Pfam PF00581 Rhodanese-like domain 463 541 1.4E-12 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PANTHER PTHR22912 1 441 1.3E-109 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 430 7.0E-13 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Gene3D G3DSA:3.30.390.30 335 441 1.7E-30 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Gene3D G3DSA:3.50.50.60 1 108 6.3E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Gene3D G3DSA:3.50.50.60 109 316 3.5E-38 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 5.5E-19 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.5E-19 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 5.5E-19 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.5E-19 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 5.5E-19 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 307 2.9E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 SMART SM00450 452 547 8.5E-13 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 2 24 1.5E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 1.5E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 1.5E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 1.5E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 PANTHER PTHR22912:SF140 1 441 1.3E-109 T 20-04-2016 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 SUPERFAMILY SSF55424 325 446 6.53E-25 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 SUPERFAMILY SSF51905 120 241 3.75E-13 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 SUPERFAMILY SSF52821 441 543 4.85E-19 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS08580 3bacd9104c55f0479ad4625e0b669076 555 Gene3D G3DSA:3.40.250.10 442 541 4.9E-18 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 Gene3D G3DSA:1.10.287.110 1 88 4.8E-33 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 SUPERFAMILY SSF49493 223 304 2.75E-15 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PRINTS PR00625 DnaJ domain signature 25 40 2.7E-28 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PRINTS PR00625 DnaJ domain signature 42 62 2.7E-28 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PRINTS PR00625 DnaJ domain signature 62 81 2.7E-28 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PRINTS PR00625 DnaJ domain signature 7 25 2.7E-28 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 Pfam PF00226 DnaJ domain 5 67 1.3E-28 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 20-04-2016 IPR018253 DnaJ domain, conserved site APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 SUPERFAMILY SSF46565 1 97 1.57E-32 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 SUPERFAMILY SSF49493 145 199 8.24E-6 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 SMART SM00271 4 62 3.1E-32 T 20-04-2016 IPR001623 DnaJ domain APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PANTHER PTHR24078 4 91 4.3E-59 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PANTHER PTHR24078 136 311 4.3E-59 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PANTHER PTHR24078 107 120 4.3E-59 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 Gene3D G3DSA:2.60.260.20 140 199 3.9E-8 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 Pfam PF01556 DnaJ C terminal domain 152 293 1.0E-18 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 Pfam PF01556 DnaJ C terminal domain 237 306 9.2E-8 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 Gene3D G3DSA:2.60.260.20 223 294 6.9E-11 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PANTHER PTHR24078:SF190 4 91 4.3E-59 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PANTHER PTHR24078:SF190 136 311 4.3E-59 T 20-04-2016 APRE_RS05125 4d4cc41e6309b998a7408e93b3fd8f97 311 PANTHER PTHR24078:SF190 107 120 4.3E-59 T 20-04-2016 APRE_RS03685 1da88cd5a4c87815e7d6c445ff98f1f6 275 SUPERFAMILY SSF53335 88 257 5.97E-33 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03685 1da88cd5a4c87815e7d6c445ff98f1f6 275 Pfam PF08241 Methyltransferase domain 111 217 1.2E-21 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APRE_RS03685 1da88cd5a4c87815e7d6c445ff98f1f6 275 Gene3D G3DSA:3.40.50.150 87 240 2.6E-33 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03685 1da88cd5a4c87815e7d6c445ff98f1f6 275 PANTHER PTHR10108 94 242 8.9E-26 T 20-04-2016 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 SUPERFAMILY SSF51735 160 382 7.4E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 SMART SM01274 15 148 1.2E-79 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 SUPERFAMILY SSF53223 6 158 1.08E-54 T 20-04-2016 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 PIRSF PIRSF000106 13 384 1.9E-80 T 20-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 PANTHER PTHR23406 30 379 1.1E-190 T 20-04-2016 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 20-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 PRINTS PR00072 Malic enzyme signature 187 203 6.2E-9 T 20-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 PRINTS PR00072 Malic enzyme signature 156 172 6.2E-9 T 20-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 PRINTS PR00072 Malic enzyme signature 77 99 6.2E-9 T 20-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 Pfam PF00390 Malic enzyme, N-terminal domain 17 148 1.7E-29 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 SMART SM00919 160 384 2.4E-113 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 Gene3D G3DSA:3.40.50.720 158 382 2.6E-76 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 9.6E-23 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 PANTHER PTHR23406:SF23 30 379 1.1E-190 T 20-04-2016 APRE_RS01280 16cd9fba1be4d43a9ab827919effc738 384 Gene3D G3DSA:3.40.50.10380 5 157 9.2E-54 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 SUPERFAMILY SSF55031 185 296 1.83E-27 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 Pfam PF01546 Peptidase family M20/M25/M40 73 383 7.0E-31 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 SUPERFAMILY SSF53187 8 198 9.84E-76 T 20-04-2016 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 SUPERFAMILY SSF53187 299 386 9.84E-76 T 20-04-2016 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 Gene3D G3DSA:3.30.70.360 183 298 1.5E-36 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 Pfam PF07687 Peptidase dimerisation domain 185 284 1.6E-13 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 PANTHER PTHR11014 10 389 1.0E-125 T 20-04-2016 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 372 7.7E-102 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 PIRSF PIRSF005962 2 389 1.7E-120 T 20-04-2016 IPR017439 Amidohydrolase GO:0016787 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 PANTHER PTHR11014:SF63 10 389 1.0E-125 T 20-04-2016 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 Gene3D G3DSA:3.40.630.10 10 179 2.7E-85 T 20-04-2016 APRE_RS01235 ecd4238373df2c8da40977370c1489e6 389 Gene3D G3DSA:3.40.630.10 299 386 2.7E-85 T 20-04-2016 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 Pfam PF01411 tRNA synthetases class II (A) 8 555 3.5E-197 T 20-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 853 2.4E-294 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 SUPERFAMILY SSF50447 454 551 5.65E-17 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 SUPERFAMILY SSF101353 246 442 5.89E-63 T 20-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 SMART SM00863 653 696 2.7E-19 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 SUPERFAMILY SSF55681 5 245 2.38E-91 T 20-04-2016 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 Gene3D G3DSA:3.30.930.10 6 241 1.7E-97 T 20-04-2016 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PANTHER PTHR11777 1 870 0.0 T 20-04-2016 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 870 159.412 T 20-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 Pfam PF02272 DHHA1 domain 800 868 4.6E-15 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PANTHER PTHR11777:SF9 1 870 0.0 T 20-04-2016 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 SUPERFAMILY SSF55186 552 707 5.49E-48 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 2.2E-17 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 1.2E-27 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 1.2E-27 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.2E-27 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 1.2E-27 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS04785 9c28bc7cfb015866fbb30f71b007a3f2 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 1.2E-27 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 SUPERFAMILY SSF52540 4 549 2.4E-225 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 Pfam PF01268 Formate--tetrahydrofolate ligase 2 551 1.5E-248 T 20-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 Gene3D G3DSA:3.30.1510.10 125 242 2.9E-52 T 20-04-2016 APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 Gene3D G3DSA:3.40.50.300 13 124 1.4E-133 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 Gene3D G3DSA:3.40.50.300 244 436 1.4E-133 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 PANTHER PTHR10025 1 550 2.4E-283 T 20-04-2016 APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 Gene3D G3DSA:3.10.410.10 439 527 3.5E-34 T 20-04-2016 APRE_RS05665 99a8b89c43832b4770a1bda35662217f 551 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 551 45.495 T 20-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 Gene3D G3DSA:3.40.50.720 1 178 3.5E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS04695 951c6114f733656db6caa50c196f4606 327 SUPERFAMILY SSF51735 1 174 5.52E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS04695 951c6114f733656db6caa50c196f4606 327 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 154 4.6E-42 T 20-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PIRSF PIRSF000114 1 327 1.4E-111 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PANTHER PTHR11728 3 327 4.5E-130 T 20-04-2016 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 317 33.838 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 175 315 4.9E-50 T 20-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 183 204 - T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 Gene3D G3DSA:1.10.1040.10 179 321 9.9E-55 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 128 148 5.7E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 168 192 5.7E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 193 217 5.7E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 5.7E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 5.7E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 233 250 5.7E-37 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APRE_RS04695 951c6114f733656db6caa50c196f4606 327 SUPERFAMILY SSF48179 174 326 2.04E-53 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 ProSitePatterns PS00202 Rubredoxin signature. 32 42 - T 20-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 PRINTS PR00163 Rubredoxin signature 32 48 2.5E-13 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 PRINTS PR00163 Rubredoxin signature 2 18 2.5E-13 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 Pfam PF00301 Rubredoxin 2 48 6.4E-25 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 PIRSF PIRSF000071 1 52 7.3E-27 T 20-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 SUPERFAMILY SSF57802 2 51 6.06E-23 T 20-04-2016 APRE_RS07555 a2debf73acf6a2daec4901d98dd6e73b 52 Gene3D G3DSA:2.20.28.10 2 50 8.5E-28 T 20-04-2016 IPR004039 Rubredoxin-type fold APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 Gene3D G3DSA:3.90.400.10 88 167 1.8E-32 T 20-04-2016 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 474 2.8E-258 T 20-04-2016 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 Gene3D G3DSA:3.20.20.80 4 87 7.8E-99 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 Gene3D G3DSA:3.20.20.80 173 424 7.8E-99 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 PANTHER PTHR10357:SF132 8 294 1.2E-133 T 20-04-2016 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 PANTHER PTHR10357:SF132 342 457 1.2E-133 T 20-04-2016 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 PANTHER PTHR10357 8 294 1.2E-133 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 PANTHER PTHR10357 342 457 1.2E-133 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 PIRSF PIRSF003059 1 483 3.6E-188 T 20-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 SUPERFAMILY SSF51445 4 425 1.13E-78 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 Pfam PF00128 Alpha amylase, catalytic domain 19 244 2.2E-11 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS01340 ef8cf7c86a79726a255f7afdcba6399b 483 SMART SM00642 6 410 6.3E-5 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 20-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 TIGRFAM TIGR00492 alr: alanine racemase 5 355 3.9E-99 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 Pfam PF00842 Alanine racemase, C-terminal domain 238 354 2.4E-36 T 20-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 268 283 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 193 220 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 289 306 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 61 79 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 251 266 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 119 131 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 26 42 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PRINTS PR00992 Alanine racemase signature 152 163 1.3E-44 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 Hamap MF_01201 Alanine racemase. 1 355 29.932 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 Gene3D G3DSA:2.40.37.10 215 362 3.0E-50 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PANTHER PTHR30511 1 360 9.0E-124 T 20-04-2016 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 SMART SM01005 235 355 2.1E-50 T 20-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 SUPERFAMILY SSF50621 229 362 1.05E-43 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 SUPERFAMILY SSF51419 8 223 5.07E-52 T 20-04-2016 IPR029066 PLP-binding barrel APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 Pfam PF01168 Alanine racemase, N-terminal domain 8 220 6.3E-56 T 20-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 PANTHER PTHR30511:SF0 1 360 9.0E-124 T 20-04-2016 APRE_RS04980 0da48d12a2433174cd4e885195cd8b72 373 Gene3D G3DSA:3.20.20.10 11 214 6.5E-61 T 20-04-2016 IPR029066 PLP-binding barrel APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 Pfam PF13167 GTP-binding GTPase N-terminal 19 105 8.2E-29 T 20-04-2016 IPR025121 GTPase HflX, N-terminal APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 Hamap MF_00900 GTPase HflX [hflX]. 20 382 42.352 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 Pfam PF16360 GTP-binding GTPase Middle Region 107 185 8.9E-27 T 20-04-2016 IPR032305 GTP-binding protein, middle domain APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 Pfam PF01926 50S ribosome-binding GTPase 191 312 3.2E-17 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 PANTHER PTHR10229:SF0 2 407 2.5E-118 T 20-04-2016 APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 SUPERFAMILY SSF52540 190 367 5.09E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 Gene3D G3DSA:3.40.50.300 190 355 6.4E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 PANTHER PTHR10229 2 407 2.5E-118 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 PIRSF PIRSF006809 1 412 5.9E-120 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APRE_RS06165 877e93456fb6e3bdec99a3242a57d6b6 412 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 6 351 2.0E-112 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 PANTHER PTHR11328:SF24 10 462 3.3E-79 T 20-04-2016 APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 PANTHER PTHR11328 10 462 3.3E-79 T 20-04-2016 APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 SUPERFAMILY SSF103473 13 447 6.8E-34 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 448 1.0E-93 T 20-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 Pfam PF13347 MFS/sugar transport protein 15 443 4.5E-85 T 20-04-2016 APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 Gene3D G3DSA:1.20.1250.20 244 448 7.6E-17 T 20-04-2016 APRE_RS08165 be5118caaf643cbfacdab32f7b7e4058 462 Gene3D G3DSA:1.20.1250.20 17 218 4.7E-9 T 20-04-2016 APRE_RS00165 2359d88b3e19a1259c807b0e741e997f 105 Pfam PF07371 Protein of unknown function (DUF1490) 15 73 7.5E-5 T 20-04-2016 IPR009963 Protein of unknown function DUF1490 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Pfam PF16188 C-terminal region of peptidase_M24 529 589 8.8E-23 T 20-04-2016 IPR032416 Peptidase M24, C-terminal domain APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 SUPERFAMILY SSF53092 10 131 5.93E-15 T 20-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 SUPERFAMILY SSF55920 302 555 7.85E-47 T 20-04-2016 IPR000994 Peptidase M24, structural domain APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 131 1.8E-19 T 20-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 SUPERFAMILY SSF53092 175 286 1.48E-7 T 20-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Gene3D G3DSA:3.40.350.10 168 292 1.2E-14 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Gene3D G3DSA:3.40.350.10 3 131 2.8E-26 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 PANTHER PTHR10804:SF87 1 179 1.2E-179 T 20-04-2016 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 PANTHER PTHR10804:SF87 281 587 1.2E-179 T 20-04-2016 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 PANTHER PTHR10804 1 179 1.2E-179 T 20-04-2016 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 PANTHER PTHR10804 281 587 1.2E-179 T 20-04-2016 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Gene3D G3DSA:3.90.230.10 299 556 7.4E-55 T 20-04-2016 IPR000994 Peptidase M24, structural domain APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Pfam PF16189 Creatinase/Prolidase N-terminal domain 147 305 3.7E-44 T 20-04-2016 APRE_RS05335 e4ff04f5a463cf52f5f9f7891c96e2a2 589 Pfam PF00557 Metallopeptidase family M24 307 520 3.0E-38 T 20-04-2016 IPR000994 Peptidase M24, structural domain APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 188 375 1.7E-43 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 Gene3D G3DSA:3.40.50.1370 177 363 7.7E-54 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PANTHER PTHR11405:SF40 292 380 2.2E-166 T 20-04-2016 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PANTHER PTHR11405:SF40 216 276 2.2E-166 T 20-04-2016 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PANTHER PTHR11405:SF40 20 193 2.2E-166 T 20-04-2016 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PRINTS PR00101 Aspartate carbamoyltransferase signature 58 80 1.2E-7 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PRINTS PR00101 Aspartate carbamoyltransferase signature 165 182 1.2E-7 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PRINTS PR00101 Aspartate carbamoyltransferase signature 96 105 1.2E-7 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 395 3.2E-235 T 20-04-2016 IPR017702 Putative carbamoyltransferase YgeW APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 SUPERFAMILY SSF53671 20 375 4.84E-58 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 24 175 1.8E-24 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PANTHER PTHR11405 292 380 2.2E-166 T 20-04-2016 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PANTHER PTHR11405 216 276 2.2E-166 T 20-04-2016 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PANTHER PTHR11405 20 193 2.2E-166 T 20-04-2016 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 342 365 1.7E-7 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 324 333 1.7E-7 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 68 87 1.7E-7 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS07360 8e14c33f55c520460e10750df2c5ac07 398 Gene3D G3DSA:3.40.50.1370 21 176 3.1E-34 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 6 370 2.2E-90 T 20-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 Pfam PF01979 Amidohydrolase family 44 367 2.3E-17 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 PANTHER PTHR11113:SF7 8 374 3.3E-137 T 20-04-2016 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 Gene3D G3DSA:3.20.20.140 50 328 2.5E-95 T 20-04-2016 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 PANTHER PTHR11113 8 374 3.3E-137 T 20-04-2016 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 Gene3D G3DSA:2.30.40.10 3 49 1.0E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 Gene3D G3DSA:2.30.40.10 352 360 1.0E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 SUPERFAMILY SSF51338 344 374 2.54E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 SUPERFAMILY SSF51338 5 47 2.54E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 Gene3D G3DSA:2.30.40.10 329 351 3.1E-7 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 SUPERFAMILY SSF51556 48 344 1.36E-93 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS00405 2a2fe4405808b7115d001fcfdb1d2ae8 375 PIRSF PIRSF038994 1 375 3.7E-120 T 20-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APRE_RS08125 5e1b6618273805fdb3db5c6acfefdc87 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 1.9E-14 T 20-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APRE_RS08125 5e1b6618273805fdb3db5c6acfefdc87 105 PANTHER PTHR34581 2 79 1.2E-17 T 20-04-2016 APRE_RS08125 5e1b6618273805fdb3db5c6acfefdc87 105 Gene3D G3DSA:3.40.50.270 1 87 1.4E-19 T 20-04-2016 APRE_RS08125 5e1b6618273805fdb3db5c6acfefdc87 105 SUPERFAMILY SSF52794 1 88 1.91E-19 T 20-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 PANTHER PTHR10302 1 138 5.0E-32 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 PIRSF PIRSF002070 1 154 7.4E-37 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 SUPERFAMILY SSF50249 1 154 1.82E-39 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 Gene3D G3DSA:2.40.50.140 1 142 2.2E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 Hamap MF_00984 Single-stranded DNA-binding protein. 1 114 30.68 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 130 3.8E-36 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS04190 65ea6e77d868ac26d8f9e59dff8ec36c 154 Pfam PF00436 Single-strand binding protein family 1 110 5.4E-33 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 PANTHER PTHR12383 4 193 6.9E-59 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 SUPERFAMILY SSF51306 36 184 1.44E-43 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 Pfam PF00717 Peptidase S24-like 43 112 3.1E-18 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 3.6E-10 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 89 101 3.6E-10 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 37 53 3.6E-10 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 Gene3D G3DSA:2.10.109.10 34 99 3.9E-33 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 Gene3D G3DSA:2.10.109.10 136 184 3.9E-33 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 PANTHER PTHR12383:SF14 4 193 6.9E-59 T 20-04-2016 APRE_RS06020 d2302ee24c879664f19421f24f0526b9 193 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 20 179 1.7E-44 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 PIRSF PIRSF005243 1 405 6.0E-108 T 20-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 Gene3D G3DSA:3.40.50.360 254 396 8.0E-28 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 PANTHER PTHR32145:SF20 2 400 2.8E-128 T 20-04-2016 APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 SUPERFAMILY SSF52218 258 396 1.16E-15 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 SMART SM00849 35 228 9.8E-13 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 Pfam PF00753 Metallo-beta-lactamase superfamily 37 195 1.3E-8 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 ProSitePatterns PS00201 Flavodoxin signature. 260 276 - T 20-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 Gene3D G3DSA:3.60.15.10 2 249 2.4E-79 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 SUPERFAMILY SSF56281 4 285 5.6E-47 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS02665 16ec7266dbc40f63e9913ba19851494c 405 PANTHER PTHR32145 2 400 2.8E-128 T 20-04-2016 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 PANTHER PTHR24220 5 363 8.1E-169 T 20-04-2016 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 Gene3D G3DSA:2.40.50.100 348 363 2.2E-16 T 20-04-2016 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 Gene3D G3DSA:2.40.50.100 240 283 2.2E-16 T 20-04-2016 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 Gene3D G3DSA:2.40.50.140 284 345 6.2E-7 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 SUPERFAMILY SSF52540 4 243 1.58E-86 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 Gene3D G3DSA:3.40.50.300 3 235 6.4E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 SMART SM00382 29 217 5.4E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 SUPERFAMILY SSF50331 237 362 1.58E-21 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 Pfam PF00005 ABC transporter 22 162 6.3E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 Pfam PF08402 TOBE domain 279 354 1.3E-6 T 20-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APRE_RS00725 8256397e20805b58133779ea3f01b4f6 363 PANTHER PTHR24220:SF151 5 363 8.1E-169 T 20-04-2016 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 Hamap MF_00163 Peptide deformylase [def]. 2 156 28.232 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 Gene3D G3DSA:3.90.45.10 5 154 7.6E-56 T 20-04-2016 IPR023635 Peptide deformylase APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 PIRSF PIRSF004749 1 158 8.6E-51 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 8 149 5.7E-46 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 SUPERFAMILY SSF56420 2 150 2.36E-53 T 20-04-2016 IPR023635 Peptide deformylase APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 Pfam PF01327 Polypeptide deformylase 4 149 8.9E-48 T 20-04-2016 IPR023635 Peptide deformylase APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 PANTHER PTHR10458 1 157 1.1E-59 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 PRINTS PR01576 Peptide deformylase signature 101 119 9.5E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 PRINTS PR01576 Peptide deformylase signature 33 62 9.5E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 PRINTS PR01576 Peptide deformylase signature 120 149 9.5E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS03455 482111953506b47cc1a65a990fe030f3 158 PRINTS PR01576 Peptide deformylase signature 89 100 9.5E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 Pfam PF00483 Nucleotidyl transferase 3 219 5.0E-21 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 319 350 1.9E-5 T 20-04-2016 IPR001451 Hexapeptide repeat APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 PANTHER PTHR22572:SF115 3 448 6.1E-168 T 20-04-2016 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 SUPERFAMILY SSF53448 1 307 8.11E-54 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 451 35.061 T 20-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3 454 2.2E-154 T 20-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 SUPERFAMILY SSF51161 256 435 3.05E-42 T 20-04-2016 IPR011004 Trimeric LpxA-like APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 PANTHER PTHR22572 3 448 6.1E-168 T 20-04-2016 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 Gene3D G3DSA:2.160.10.10 245 332 6.3E-18 T 20-04-2016 APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 Gene3D G3DSA:3.90.550.10 1 244 3.0E-59 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04955 dd882cf9d9c40e520ff62b0613162410 464 Gene3D G3DSA:2.160.10.10 333 453 2.0E-31 T 20-04-2016 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Gene3D G3DSA:1.10.730.10 444 565 1.1E-37 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 83 2.7E-14 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 PANTHER PTHR11956:SF1 1 565 1.1E-229 T 20-04-2016 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Pfam PF00750 tRNA synthetases class I (R) 94 436 2.0E-101 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 565 26.185 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 SUPERFAMILY SSF55190 4 105 9.02E-24 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 SMART SM01016 2 84 5.0E-19 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 SMART SM00836 450 565 1.2E-45 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 SUPERFAMILY SSF47323 446 565 6.54E-34 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 565 1.2E-163 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 PANTHER PTHR11956 1 565 1.1E-229 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Gene3D G3DSA:3.40.50.620 108 442 1.1E-112 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Pfam PF05746 DALR anticodon binding domain 450 565 4.7E-33 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 Gene3D G3DSA:3.30.1360.70 4 101 3.2E-25 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.973389E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.973389E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 1.973389E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.973389E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APRE_RS06845 2223db8daa949f33706679d1820f620b 565 SUPERFAMILY SSF52374 108 444 8.8E-96 T 20-04-2016 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 Gene3D G3DSA:1.10.8.60 187 259 1.8E-32 T 20-04-2016 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 SMART SM00382 55 182 2.9E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 SUPERFAMILY SSF46785 260 332 6.8E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 331 1.0E-25 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 160.086 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 Gene3D G3DSA:1.10.10.10 261 331 2.9E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 330 1.7E-139 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 PANTHER PTHR13779:SF25 4 335 2.8E-165 T 20-04-2016 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 PANTHER PTHR13779 4 335 2.8E-165 T 20-04-2016 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 Gene3D G3DSA:3.40.50.300 24 178 9.5E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 SUPERFAMILY SSF52540 24 252 1.24E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 239 1.2E-113 T 20-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APRE_RS04630 f04e439467661b29620f30c3bab5d004 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.4E-32 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 SMART SM00448 4 114 7.1E-40 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 PANTHER PTHR26402 4 227 1.6E-90 T 20-04-2016 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 SUPERFAMILY SSF52172 2 124 6.55E-38 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 Gene3D G3DSA:1.10.10.10 137 227 1.0E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 SUPERFAMILY SSF46894 137 227 8.79E-25 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 Gene3D G3DSA:3.40.50.2300 2 123 1.6E-38 T 20-04-2016 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 PANTHER PTHR26402:SF614 4 227 1.6E-90 T 20-04-2016 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 Pfam PF00072 Response regulator receiver domain 6 115 2.6E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 5.4E-23 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS06180 a9cd438e66a2ff425797bd951ba8fcd9 237 SMART SM00862 152 228 2.8E-20 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 Gene3D G3DSA:3.90.76.10 127 209 1.5E-15 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 PANTHER PTHR30290:SF9 547 698 3.1E-40 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 PANTHER PTHR30290:SF9 1 250 3.1E-40 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 PANTHER PTHR30290:SF9 341 525 3.1E-40 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 SUPERFAMILY SSF53850 333 514 2.17E-55 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 SUPERFAMILY SSF53850 132 240 2.17E-55 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 SUPERFAMILY SSF53850 547 702 2.17E-55 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 132 536 5.5E-35 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 PANTHER PTHR30290 547 698 3.1E-40 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 PANTHER PTHR30290 1 250 3.1E-40 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 PANTHER PTHR30290 341 525 3.1E-40 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 Gene3D G3DSA:3.40.190.10 332 441 1.2E-16 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 Gene3D G3DSA:3.40.190.10 210 240 1.2E-16 T 20-04-2016 APRE_RS00070 32b44eb2c5f45722376e8cb30e131cdd 714 Gene3D G3DSA:3.10.105.10 442 680 3.1E-25 T 20-04-2016 APRE_RS02330 437a2d83cac34418965daee986b6943a 289 Gene3D G3DSA:2.30.30.40 118 176 5.3E-8 T 20-04-2016 APRE_RS02330 437a2d83cac34418965daee986b6943a 289 Gene3D G3DSA:1.10.530.10 206 251 1.1E-4 T 20-04-2016 APRE_RS02330 437a2d83cac34418965daee986b6943a 289 SMART SM00287 31 93 0.15 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS02330 437a2d83cac34418965daee986b6943a 289 SMART SM00287 94 155 1.2E-5 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS02330 437a2d83cac34418965daee986b6943a 289 Pfam PF08239 Bacterial SH3 domain 102 151 1.7E-11 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS02330 437a2d83cac34418965daee986b6943a 289 Pfam PF08239 Bacterial SH3 domain 40 85 1.0E-6 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS02330 437a2d83cac34418965daee986b6943a 289 SUPERFAMILY SSF50044 118 156 1.09E-6 T 20-04-2016 IPR001452 SH3 domain GO:0005515 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 239 1.6E-76 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 PANTHER PTHR13799:SF13 1 243 8.8E-68 T 20-04-2016 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 PANTHER PTHR13799 1 243 8.8E-68 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 248 1.1E-63 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 Gene3D G3DSA:3.40.1390.30 114 219 1.1E-32 T 20-04-2016 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 Gene3D G3DSA:3.40.1390.30 1 113 7.3E-47 T 20-04-2016 APRE_RS05770 6e2365967c41482e3661cbf783f5c930 256 SUPERFAMILY SSF102705 1 246 3.53E-81 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 Pfam PF13307 Helicase C-terminal domain 591 754 4.0E-32 T 20-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 SMART SM00491 607 741 8.9E-10 T 20-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 SUPERFAMILY SSF52540 323 396 1.09E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 SUPERFAMILY SSF52540 199 257 1.09E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 SUPERFAMILY SSF52540 524 737 1.09E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 Pfam PF06733 DEAD_2 289 394 2.1E-11 T 20-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 SMART SM00488 179 419 9.8E-4 T 20-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 PANTHER PTHR11472 167 777 3.5E-65 T 20-04-2016 APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 Gene3D G3DSA:3.40.50.300 338 406 1.5E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 Gene3D G3DSA:3.40.50.300 182 288 1.5E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05085 76e9e384b1715911c657860ea4e010af 777 Gene3D G3DSA:3.40.50.300 526 538 1.5E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 PANTHER PTHR11851 3 916 1.3E-176 T 20-04-2016 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 Pfam PF05193 Peptidase M16 inactive domain 197 366 1.4E-12 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 Pfam PF08367 Peptidase M16C associated 446 690 4.7E-52 T 20-04-2016 IPR013578 Peptidase M16C associated GO:0006508 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 SUPERFAMILY SSF63411 253 501 5.83E-27 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 SUPERFAMILY SSF63411 749 946 8.62E-22 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 Gene3D G3DSA:3.30.830.10 277 437 3.3E-4 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 SUPERFAMILY SSF63411 16 233 6.42E-40 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 Gene3D G3DSA:3.30.830.10 539 729 3.5E-4 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 Gene3D G3DSA:3.30.830.10 30 232 1.3E-40 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 SMART SM01264 444 691 5.3E-50 T 20-04-2016 IPR013578 Peptidase M16C associated GO:0006508 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 PANTHER PTHR11851:SF150 3 916 1.3E-176 T 20-04-2016 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 SUPERFAMILY SSF63411 503 744 6.66E-46 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APRE_RS01005 ca46579785f77a96fe338b27f55e18a8 949 Pfam PF00675 Insulinase (Peptidase family M16) 50 134 1.8E-8 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Pfam PF09334 tRNA synthetases class I (M) 40 182 4.6E-20 T 20-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Gene3D G3DSA:3.40.50.620 3 222 2.4E-152 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Gene3D G3DSA:3.40.50.620 423 605 2.4E-152 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 SUPERFAMILY SSF47323 622 800 4.3E-31 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Gene3D G3DSA:3.90.740.10 223 422 8.1E-55 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946:SF7 288 454 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946:SF7 472 800 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946:SF7 239 264 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946:SF7 3 206 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 800 21.367 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 SUPERFAMILY SSF50677 225 413 2.93E-49 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Pfam PF08264 Anticodon-binding domain of tRNA 653 762 2.9E-16 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 SUPERFAMILY SSF52374 4 225 7.37E-140 T 20-04-2016 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 SUPERFAMILY SSF52374 414 627 7.37E-140 T 20-04-2016 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 401 3.5E-64 T 20-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 800 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Gene3D G3DSA:1.10.730.10 606 735 1.0E-29 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 415 605 2.1E-21 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946 288 454 0.0 T 20-04-2016 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946 472 800 0.0 T 20-04-2016 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946 239 264 0.0 T 20-04-2016 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PANTHER PTHR11946 3 206 0.0 T 20-04-2016 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 560 570 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 488 506 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS06090 da320c408eb7590cbd56ac8c5b17b0d0 800 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.0E-46 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.4E-23 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 SUPERFAMILY SSF46561 1 64 1.57E-23 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.986 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 Gene3D G3DSA:1.10.287.310 1 65 1.3E-29 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 PANTHER PTHR10916:SF0 1 66 3.8E-27 T 20-04-2016 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 20-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 Pfam PF00831 Ribosomal L29 protein 4 60 4.5E-26 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08030 362024feee6167c26111c1bf2a22cfca 68 PANTHER PTHR10916 1 66 3.8E-27 T 20-04-2016 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 SUPERFAMILY SSF55604 429 503 5.75E-21 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 2 498 1.2E-172 T 20-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 Pfam PF00367 phosphotransferase system, EIIB 432 464 1.1E-13 T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 389 489 1.0E-14 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 Pfam PF02378 Phosphotransferase system, EIIC 10 328 8.1E-63 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 PANTHER PTHR30009:SF4 3 504 1.8E-184 T 20-04-2016 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 442 459 - T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 Gene3D G3DSA:3.30.1360.60 425 503 1.3E-27 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS00435 d49f69094299b4d5db3fd72e2c057170 504 PANTHER PTHR30009 3 504 1.8E-184 T 20-04-2016 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SUPERFAMILY SSF81923 74 151 3.14E-5 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SUPERFAMILY SSF52540 155 442 7.27E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 530 548 2.0E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 651 2.0E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 575 593 2.0E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 2.0E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:4.10.860.10 414 439 2.3E-5 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 286 298 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SMART SM00382 191 331 9.7E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SMART SM00382 526 666 2.6E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:3.40.50.300 153 334 1.4E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 88 128 3.6 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 61 7.0E-9 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 196 307 2.4E-13 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SUPERFAMILY SSF81923 3 58 2.09E-7 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 PANTHER PTHR11638 4 814 0.0 T 20-04-2016 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 560 578 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SMART SM01086 704 793 3.1E-23 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 SUPERFAMILY SSF52540 475 793 6.0E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:1.10.1780.10 6 138 2.7E-21 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:3.40.50.300 479 650 2.1E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:3.40.50.300 685 714 2.1E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 PANTHER PTHR11638:SF18 4 814 0.0 T 20-04-2016 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:1.10.8.60 336 413 3.3E-31 T 20-04-2016 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Pfam PF02151 UvrB/uvrC motif 409 439 1.8E-9 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Gene3D G3DSA:1.10.8.60 715 805 1.6E-25 T 20-04-2016 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Pfam PF07724 AAA domain (Cdc48 subfamily) 525 697 2.2E-55 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS00650 a0b4f087dccfab672cbbef3d47a535b9 814 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 704 784 2.3E-20 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 Gene3D G3DSA:3.20.70.20 492 670 1.1E-69 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 Gene3D G3DSA:3.20.70.20 222 434 1.1E-69 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 Gene3D G3DSA:3.20.70.20 711 832 1.1E-69 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 Pfam PF02867 Ribonucleotide reductase, barrel domain 313 826 2.1E-145 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 700 722 - T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PRINTS PR01183 Ribonucleotide reductase large chain signature 711 738 4.74734E-35 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PRINTS PR01183 Ribonucleotide reductase large chain signature 388 407 4.74734E-35 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PRINTS PR01183 Ribonucleotide reductase large chain signature 526 537 4.74734E-35 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PRINTS PR01183 Ribonucleotide reductase large chain signature 621 643 4.74734E-35 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PRINTS PR01183 Ribonucleotide reductase large chain signature 583 606 4.74734E-35 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 SUPERFAMILY SSF51998 312 840 1.98E-163 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PANTHER PTHR11573:SF6 566 837 1.4E-237 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PANTHER PTHR11573:SF6 110 542 1.4E-237 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 Pfam PF03477 ATP cone domain 1 92 1.2E-21 T 20-04-2016 IPR005144 ATP-cone domain APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 236 308 8.3E-18 T 20-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PANTHER PTHR11573 566 837 1.4E-237 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 PANTHER PTHR11573 110 542 1.4E-237 T 20-04-2016 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 238 829 3.6E-177 T 20-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APRE_RS08695 82af42324c6b3c52989d1e32f0b50ad6 842 SUPERFAMILY SSF48168 104 311 4.05E-53 T 20-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 PIRSF PIRSF000390 1 399 2.6E-82 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 391 4.9E-86 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 PANTHER PTHR30244 1 399 1.8E-165 T 20-04-2016 APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 Gene3D G3DSA:3.40.640.10 2 270 3.5E-78 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 Gene3D G3DSA:3.90.1150.10 271 398 1.7E-40 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 PANTHER PTHR30244:SF3 1 399 1.8E-165 T 20-04-2016 APRE_RS06445 4168cb5f6a95c04a1177ee3633bb2404 400 SUPERFAMILY SSF53383 2 397 1.94E-93 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 Gene3D G3DSA:1.10.286.20 111 161 1.5E-7 T 20-04-2016 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 86 221 1.1E-37 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 94 1.0E-32 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 Hamap MF_00050 Elongation factor Ts [tsf]. 1 220 45.787 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 SUPERFAMILY SSF54713 59 221 1.31E-47 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 PANTHER PTHR11741 1 221 1.3E-95 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 SUPERFAMILY SSF46934 1 55 2.89E-18 T 20-04-2016 IPR009060 UBA-like GO:0005515 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 Gene3D G3DSA:1.10.8.10 1 54 8.7E-26 T 20-04-2016 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 Gene3D G3DSA:3.30.479.20 162 206 3.5E-33 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 Gene3D G3DSA:3.30.479.20 56 109 3.5E-33 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 Pfam PF00889 Elongation factor TS 55 203 2.0E-38 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APRE_RS04885 b96ef8b8c8b972e6c0bc2d5aca046bee 221 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 20-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 3.1E-50 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 PANTHER PTHR30194 1 163 2.4E-64 T 20-04-2016 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 2.8E-42 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 20-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 Gene3D G3DSA:3.30.420.10 1 156 8.0E-63 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 4.2E-32 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 4.2E-32 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 4.2E-32 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 4.2E-32 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 4.2E-32 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 45.056 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APRE_RS04620 f4bf1e1c63f9227e9a858d054bf4e75f 164 SUPERFAMILY SSF53098 1 154 9.86E-50 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 208 291 3.6E-35 T 20-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 PIRSF PIRSF000089 3 333 5.2E-118 T 20-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 PANTHER PTHR10909 138 331 1.4E-56 T 20-04-2016 APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 SMART SM00893 7 192 1.7E-38 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 Gene3D G3DSA:3.40.50.620 5 199 2.0E-68 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 Pfam PF01012 Electron transfer flavoprotein domain 8 184 1.7E-41 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 Gene3D G3DSA:3.40.50.1220 204 329 1.8E-57 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 SUPERFAMILY SSF52467 208 327 1.64E-48 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 SUPERFAMILY SSF52402 6 201 5.79E-50 T 20-04-2016 APRE_RS06940 42ef6c80a448458e35a7ca989989ba4f 334 PANTHER PTHR10909:SF299 138 331 1.4E-56 T 20-04-2016 APRE_RS02990 0e688e90ad6ddd299b9ea5f5db5530e9 309 Gene3D G3DSA:3.40.710.10 143 304 7.9E-22 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS02990 0e688e90ad6ddd299b9ea5f5db5530e9 309 Gene3D G3DSA:3.40.710.10 70 135 4.2E-6 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS02990 0e688e90ad6ddd299b9ea5f5db5530e9 309 Pfam PF13354 Beta-lactamase enzyme family 139 276 4.5E-16 T 20-04-2016 APRE_RS02990 0e688e90ad6ddd299b9ea5f5db5530e9 309 SUPERFAMILY SSF56601 76 300 1.73E-27 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS02980 7e9eac9bb8b8fa20da2c09ba62fe69b1 355 Gene3D G3DSA:3.40.640.10 14 230 2.2E-67 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS02980 7e9eac9bb8b8fa20da2c09ba62fe69b1 355 Gene3D G3DSA:3.90.1150.10 231 352 4.3E-29 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS02980 7e9eac9bb8b8fa20da2c09ba62fe69b1 355 PIRSF PIRSF005572 1 355 1.3E-97 T 20-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APRE_RS02980 7e9eac9bb8b8fa20da2c09ba62fe69b1 355 SUPERFAMILY SSF53383 1 355 9.31E-83 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS02980 7e9eac9bb8b8fa20da2c09ba62fe69b1 355 Pfam PF00266 Aminotransferase class-V 2 346 3.2E-70 T 20-04-2016 IPR000192 Aminotransferase class V domain APRE_RS02980 7e9eac9bb8b8fa20da2c09ba62fe69b1 355 PANTHER PTHR11601 1 355 8.6E-107 T 20-04-2016 APRE_RS01300 93ef3cbd57b9261952a389cfb92a2379 269 Gene3D G3DSA:3.40.50.620 24 198 2.1E-21 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS01300 93ef3cbd57b9261952a389cfb92a2379 269 PANTHER PTHR11807:SF16 1 253 5.6E-76 T 20-04-2016 APRE_RS01300 93ef3cbd57b9261952a389cfb92a2379 269 PANTHER PTHR11807 1 253 5.6E-76 T 20-04-2016 APRE_RS01300 93ef3cbd57b9261952a389cfb92a2379 269 PIRSF PIRSF004976 4 268 6.4E-67 T 20-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APRE_RS01300 93ef3cbd57b9261952a389cfb92a2379 269 SUPERFAMILY SSF52402 24 248 3.09E-44 T 20-04-2016 APRE_RS01300 93ef3cbd57b9261952a389cfb92a2379 269 Pfam PF01171 PP-loop family 37 222 1.1E-14 T 20-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 Gene3D G3DSA:3.60.20.10 3 242 5.1E-53 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 3 441 2.5E-134 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 442 41.166 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 Pfam PF13537 Glutamine amidotransferase domain 82 198 3.6E-14 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 SUPERFAMILY SSF56235 3 242 3.43E-54 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 PANTHER PTHR11907 1 446 9.0E-183 T 20-04-2016 APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 PANTHER PTHR11907:SF0 1 446 9.0E-183 T 20-04-2016 APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 PIRSF PIRSF000485 1 447 1.9E-150 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 Gene3D G3DSA:3.40.50.2020 258 423 1.3E-42 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS05660 8a855469af2027ff4e26520b66eac347 447 SUPERFAMILY SSF53271 235 444 5.11E-66 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PANTHER PTHR24322 150 181 3.3E-51 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PANTHER PTHR24322 6 134 3.3E-51 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 191 6.5E-4 T 20-04-2016 APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.7E-16 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.7E-16 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.7E-16 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 Gene3D G3DSA:3.40.50.720 2 241 8.0E-78 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 SUPERFAMILY SSF51735 2 241 5.41E-75 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.8E-40 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PANTHER PTHR24322:SF513 150 181 3.3E-51 T 20-04-2016 APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 PANTHER PTHR24322:SF513 6 134 3.3E-51 T 20-04-2016 APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 Pfam PF00106 short chain dehydrogenase 2 193 4.5E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APRE_RS02865 a2a93a6c9e1ec3ba5af73bd736de93f8 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 PANTHER PTHR30290 1 547 3.2E-173 T 20-04-2016 APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 SUPERFAMILY SSF53850 43 547 9.62E-138 T 20-04-2016 APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 474 1.4E-93 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 Gene3D G3DSA:3.90.76.10 56 225 3.3E-47 T 20-04-2016 APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 PANTHER PTHR30290:SF10 1 547 3.2E-173 T 20-04-2016 APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 PIRSF PIRSF002741 1 550 2.0E-118 T 20-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APRE_RS02485 710f2f5976ecaf2737b96568a185b23e 552 Gene3D G3DSA:3.10.105.10 297 523 4.0E-68 T 20-04-2016 APRE_RS02855 dc64d87031c5493d236c51065ee198a5 258 PIRSF PIRSF016557 1 255 1.4E-62 T 20-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 APRE_RS02855 dc64d87031c5493d236c51065ee198a5 258 Gene3D G3DSA:3.20.20.140 1 219 5.5E-11 T 20-04-2016 APRE_RS02855 dc64d87031c5493d236c51065ee198a5 258 PANTHER PTHR39181:SF1 2 255 1.5E-48 T 20-04-2016 APRE_RS02855 dc64d87031c5493d236c51065ee198a5 258 SUPERFAMILY SSF89550 1 197 6.67E-19 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APRE_RS02855 dc64d87031c5493d236c51065ee198a5 258 PANTHER PTHR39181 2 255 1.5E-48 T 20-04-2016 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 317 333 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 64 80 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 221 247 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 248 272 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 273 297 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PRINTS PR01050 Pyruvate kinase family signature 298 316 4.7E-78 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Pfam PF00224 Pyruvate kinase, barrel domain 7 341 1.6E-146 T 20-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PANTHER PTHR11817 2 586 2.0E-261 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 SUPERFAMILY SSF50800 76 171 6.63E-29 T 20-04-2016 IPR011037 Pyruvate kinase-like, insert domain APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 ProSitePatterns PS00110 Pyruvate kinase active site signature. 219 231 - T 20-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Gene3D G3DSA:3.50.30.10 476 583 1.1E-23 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 SUPERFAMILY SSF52935 327 478 9.29E-38 T 20-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Gene3D G3DSA:3.20.20.60 7 77 6.5E-114 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Gene3D G3DSA:3.20.20.60 173 329 6.5E-114 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 SUPERFAMILY SSF51621 171 343 2.76E-103 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 SUPERFAMILY SSF51621 6 80 2.76E-103 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 PANTHER PTHR11817:SF3 2 586 2.0E-261 T 20-04-2016 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 SUPERFAMILY SSF52009 470 588 7.06E-27 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Gene3D G3DSA:2.40.33.10 78 172 1.7E-32 T 20-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 475 1.9E-32 T 20-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 7 477 6.9E-184 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Pfam PF00391 PEP-utilising enzyme, mobile domain 508 576 4.2E-19 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS03530 8aa0b8cf9ff38325d2794ae338df3c2e 590 Gene3D G3DSA:3.40.1380.20 330 475 2.7E-47 T 20-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 SUPERFAMILY SSF53335 71 455 2.0E-65 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 PANTHER PTHR11061 1 457 2.1E-114 T 20-04-2016 APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 Gene3D G3DSA:2.40.50.140 3 66 1.1E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 90 456 3.4E-24 T 20-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 33 448 1.5E-82 T 20-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 PANTHER PTHR11061:SF30 1 457 2.1E-114 T 20-04-2016 APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 386 417 - T 20-04-2016 IPR030390 RNA methyltransferase TrmA, active site APRE_RS05080 71f850d43d152f0857390197eb8a4fd6 457 Gene3D G3DSA:3.40.50.150 257 455 1.4E-59 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 Pfam PF00005 ABC transporter 354 511 3.2E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 Gene3D G3DSA:1.20.1560.10 6 318 1.1E-15 T 20-04-2016 APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 SUPERFAMILY SSF52540 331 581 9.2E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 SUPERFAMILY SSF90123 5 319 1.96E-22 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 SMART SM00382 363 557 2.9E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 PANTHER PTHR24221:SF138 23 581 6.1E-78 T 20-04-2016 APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 Gene3D G3DSA:3.40.50.300 333 576 3.5E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 Pfam PF00664 ABC transporter transmembrane region 23 285 3.5E-9 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS06050 cc94dd53a893b2cd9513b82c473b5c40 586 PANTHER PTHR24221 23 581 6.1E-78 T 20-04-2016 APRE_RS00775 bd7ad5c44daa7471dfdc287bc45791ed 290 Gene3D G3DSA:3.30.420.40 102 281 8.6E-39 T 20-04-2016 APRE_RS00775 bd7ad5c44daa7471dfdc287bc45791ed 290 PANTHER PTHR18964:SF121 1 289 3.8E-43 T 20-04-2016 APRE_RS00775 bd7ad5c44daa7471dfdc287bc45791ed 290 PANTHER PTHR18964 1 289 3.8E-43 T 20-04-2016 APRE_RS00775 bd7ad5c44daa7471dfdc287bc45791ed 290 Pfam PF00480 ROK family 5 278 1.2E-28 T 20-04-2016 IPR000600 ROK family APRE_RS00775 bd7ad5c44daa7471dfdc287bc45791ed 290 Gene3D G3DSA:3.30.420.40 1 101 4.6E-23 T 20-04-2016 APRE_RS00775 bd7ad5c44daa7471dfdc287bc45791ed 290 SUPERFAMILY SSF53067 1 279 1.27E-41 T 20-04-2016 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 PANTHER PTHR21109 1 60 1.9E-20 T 20-04-2016 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.908 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.0E-13 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.0E-13 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.0E-13 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.0E-13 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 Pfam PF01165 Ribosomal protein S21 4 57 6.9E-23 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 20-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 3.4E-23 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS05920 a1f909eec8a413d7813c8db263a51032 60 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 2.0E-7 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APRE_RS06910 fac91b582d6b22d491e534dae8cc7eff 159 PIRSF PIRSF006181 2 159 7.0E-47 T 20-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APRE_RS06910 fac91b582d6b22d491e534dae8cc7eff 159 Pfam PF04073 Aminoacyl-tRNA editing domain 33 148 1.1E-19 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APRE_RS06910 fac91b582d6b22d491e534dae8cc7eff 159 SUPERFAMILY SSF55826 7 158 3.79E-34 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APRE_RS06910 fac91b582d6b22d491e534dae8cc7eff 159 Gene3D G3DSA:3.90.960.10 2 158 7.0E-41 T 20-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APRE_RS06910 fac91b582d6b22d491e534dae8cc7eff 159 PANTHER PTHR30411:SF0 3 159 1.9E-36 T 20-04-2016 APRE_RS06910 fac91b582d6b22d491e534dae8cc7eff 159 PANTHER PTHR30411 3 159 1.9E-36 T 20-04-2016 APRE_RS05735 689b81b55830d46339232ea926a79be8 261 Gene3D G3DSA:3.40.50.300 7 138 3.2E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05735 689b81b55830d46339232ea926a79be8 261 Pfam PF13177 DNA polymerase III, delta subunit 7 140 1.8E-26 T 20-04-2016 APRE_RS05735 689b81b55830d46339232ea926a79be8 261 PANTHER PTHR11669:SF8 6 139 8.4E-22 T 20-04-2016 APRE_RS05735 689b81b55830d46339232ea926a79be8 261 PANTHER PTHR11669 6 139 8.4E-22 T 20-04-2016 APRE_RS05735 689b81b55830d46339232ea926a79be8 261 SUPERFAMILY SSF52540 11 161 1.16E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 11 568 4.2E-246 T 20-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 Gene3D G3DSA:3.40.50.300 314 574 3.3E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 Gene3D G3DSA:3.40.50.300 12 281 4.7E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 SUPERFAMILY SSF52540 311 546 5.65E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 Pfam PF02374 Anion-transporting ATPase 12 292 4.1E-72 T 20-04-2016 IPR025723 Anion-transporting ATPase-like domain APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 Pfam PF02374 Anion-transporting ATPase 474 573 1.5E-7 T 20-04-2016 IPR025723 Anion-transporting ATPase-like domain APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 Pfam PF02374 Anion-transporting ATPase 326 467 1.8E-29 T 20-04-2016 IPR025723 Anion-transporting ATPase-like domain APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 SUPERFAMILY SSF52540 13 295 3.12E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 PANTHER PTHR10803 5 382 4.1E-92 T 20-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 16 292 1.7E-74 T 20-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 PANTHER PTHR10803:SF0 5 382 4.1E-92 T 20-04-2016 APRE_RS01925 ded424e5988ca9067b12d0cd493456db 580 PIRSF PIRSF001327 1 580 5.9E-259 T 20-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 Gene3D G3DSA:3.40.630.30 151 303 4.0E-48 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 SUPERFAMILY SSF55729 159 327 2.6E-32 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 PANTHER PTHR36174:SF1 14 341 9.6E-42 T 20-04-2016 APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 PANTHER PTHR36174 14 341 9.6E-42 T 20-04-2016 APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 SUPERFAMILY SSF55729 12 161 1.06E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 Gene3D G3DSA:3.40.630.30 2 150 2.4E-44 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 Pfam PF02388 FemAB family 12 227 7.0E-35 T 20-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 APRE_RS01570 7188041bb0dff29bb630a0464b69120d 341 Pfam PF02388 FemAB family 228 322 1.9E-15 T 20-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 75 21.622 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 23 72 2.0E-16 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 PANTHER PTHR13479 4 72 1.2E-29 T 20-04-2016 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 Pfam PF01084 Ribosomal protein S18 21 70 1.1E-27 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 73 6.4E-31 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 2.0E-20 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 2.0E-20 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 2.0E-20 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 2.0E-20 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 Gene3D G3DSA:4.10.640.10 10 73 1.4E-31 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 23 46 - T 20-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02565 8e8da3941a6444bfb107c97adf59b2c4 75 SUPERFAMILY SSF46911 3 73 1.83E-28 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Gene3D G3DSA:2.40.30.10 305 397 8.9E-46 T 20-04-2016 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.2E-56 T 20-04-2016 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 2.4E-212 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 7.6E-14 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 SUPERFAMILY SSF52540 6 222 3.71E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Gene3D G3DSA:3.40.50.300 5 214 2.2E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 9.7E-20 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 SUPERFAMILY SSF50447 208 305 8.84E-31 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 58.389 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 2.9E-32 T 20-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APRE_RS02440 81cf02e662805afa397ed730e7899520 398 Gene3D G3DSA:2.40.30.10 215 302 1.7E-38 T 20-04-2016 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PANTHER PTHR23115:SF112 1 398 4.9E-234 T 20-04-2016 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 PANTHER PTHR23115 1 398 4.9E-234 T 20-04-2016 APRE_RS02440 81cf02e662805afa397ed730e7899520 398 SUPERFAMILY SSF50465 303 397 2.4E-35 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APRE_RS05805 81cf02e662805afa397ed730e7899520 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Gene3D G3DSA:2.40.30.10 305 397 8.9E-46 T 20-04-2016 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.3E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.2E-56 T 20-04-2016 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 2.4E-212 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 7.6E-14 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 SUPERFAMILY SSF52540 6 222 3.71E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Gene3D G3DSA:3.40.50.300 5 214 2.2E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 9.7E-20 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 SUPERFAMILY SSF50447 208 305 8.84E-31 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 58.389 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 2.9E-32 T 20-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APRE_RS05805 81cf02e662805afa397ed730e7899520 398 Gene3D G3DSA:2.40.30.10 215 302 1.7E-38 T 20-04-2016 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PANTHER PTHR23115:SF112 1 398 4.9E-234 T 20-04-2016 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 PANTHER PTHR23115 1 398 4.9E-234 T 20-04-2016 APRE_RS05805 81cf02e662805afa397ed730e7899520 398 SUPERFAMILY SSF50465 303 397 2.4E-35 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APRE_RS06310 7369e3df247ee2cda7d0d8ae0a49fd3c 271 PANTHER PTHR31756 3 263 7.7E-74 T 20-04-2016 APRE_RS06310 7369e3df247ee2cda7d0d8ae0a49fd3c 271 Pfam PF03618 Kinase/pyrophosphorylase 3 257 2.2E-78 T 20-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APRE_RS06310 7369e3df247ee2cda7d0d8ae0a49fd3c 271 PANTHER PTHR31756:SF3 3 263 7.7E-74 T 20-04-2016 APRE_RS08615 23acca6fb0fd869fca57053c865beb15 528 Pfam PF03553 Na+/H+ antiporter family 183 502 1.0E-52 T 20-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APRE_RS08615 23acca6fb0fd869fca57053c865beb15 528 PANTHER PTHR33451 16 526 6.9E-140 T 20-04-2016 APRE_RS08615 23acca6fb0fd869fca57053c865beb15 528 PANTHER PTHR33451:SF7 16 526 6.9E-140 T 20-04-2016 APRE_RS08545 21530d0d0c4a6e48148c787b9ab05817 719 SUPERFAMILY SSF52317 470 657 1.6E-26 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS08545 21530d0d0c4a6e48148c787b9ab05817 719 Pfam PF09508 Lacto-N-biose phosphorylase 7 718 0.0 T 20-04-2016 IPR012711 Lacto-N-biose phosphorylase GO:0016758 APRE_RS08545 21530d0d0c4a6e48148c787b9ab05817 719 TIGRFAM TIGR02336 TIGR02336: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase 5 718 6.5E-288 T 20-04-2016 IPR012711 Lacto-N-biose phosphorylase GO:0016758 APRE_RS08545 21530d0d0c4a6e48148c787b9ab05817 719 Gene3D G3DSA:3.40.50.880 475 662 8.5E-8 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 439 3.8E-148 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PANTHER PTHR30330 1 452 2.3E-193 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PANTHER PTHR30330:SF3 1 452 2.3E-193 T 20-04-2016 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PRINTS PR00175 Sodium/alanine symporter signature 305 323 7.7E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PRINTS PR00175 Sodium/alanine symporter signature 210 229 7.7E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PRINTS PR00175 Sodium/alanine symporter signature 349 371 7.7E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PRINTS PR00175 Sodium/alanine symporter signature 408 428 7.7E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PRINTS PR00175 Sodium/alanine symporter signature 182 200 7.7E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 7.7E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS08675 9f11cfd7f22d72074636d5063bb05e43 458 Pfam PF01235 Sodium:alanine symporter family 54 443 2.4E-140 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 Gene3D G3DSA:1.10.3090.10 145 325 4.6E-53 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 Gene3D G3DSA:1.10.3090.10 387 408 4.6E-53 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 Gene3D G3DSA:3.30.460.10 8 144 3.4E-46 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 PANTHER PTHR13734:SF5 10 434 6.2E-83 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 293 436 1.6E-18 T 20-04-2016 IPR032810 CCA-adding enzyme, C-terminal APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 PANTHER PTHR13734 10 434 6.2E-83 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 SUPERFAMILY SSF81301 9 139 1.85E-37 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 SUPERFAMILY SSF81891 142 441 7.19E-53 T 20-04-2016 APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 231 4.7E-19 T 20-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APRE_RS02010 557308f243f1f3b0b77e84d8d09f676a 450 Pfam PF01743 Poly A polymerase head domain 26 144 1.8E-35 T 20-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APRE_RS04815 93990f690269511e8abf5ef71bdc611f 211 SUPERFAMILY SSF53335 31 209 3.77E-37 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS04815 93990f690269511e8abf5ef71bdc611f 211 PANTHER PTHR10509 24 208 1.3E-45 T 20-04-2016 APRE_RS04815 93990f690269511e8abf5ef71bdc611f 211 Gene3D G3DSA:3.40.50.150 23 208 9.6E-53 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS04815 93990f690269511e8abf5ef71bdc611f 211 PANTHER PTHR10509:SF14 24 208 1.3E-45 T 20-04-2016 APRE_RS04815 93990f690269511e8abf5ef71bdc611f 211 Pfam PF01596 O-methyltransferase 24 207 3.5E-30 T 20-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 APRE_RS01240 b754f5bb022186215aa5ab8af59216f1 180 Pfam PF14285 Domain of unknown function (DUF4367) 75 177 1.1E-9 T 20-04-2016 IPR025377 Domain of unknown function DUF4367 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 Gene3D G3DSA:1.10.260.40 3 86 6.0E-21 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 SUPERFAMILY SSF47413 1 65 2.44E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 Pfam PF01381 Helix-turn-helix 7 61 6.4E-16 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 PANTHER PTHR33516:SF2 70 206 1.4E-18 T 20-04-2016 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 PANTHER PTHR33516 70 206 1.4E-18 T 20-04-2016 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 Gene3D G3DSA:2.10.109.10 87 206 1.9E-26 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 SMART SM00530 6 61 4.9E-16 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 SUPERFAMILY SSF51306 77 201 4.45E-24 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APRE_RS04120 32fb9df488b4b16e57b2599f1b0c37d9 206 Pfam PF00717 Peptidase S24-like 119 186 6.3E-13 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B APRE_RS06250 641138796059a14c1136959cdeacb984 370 Pfam PF00005 ABC transporter 25 167 1.3E-36 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS06250 641138796059a14c1136959cdeacb984 370 SUPERFAMILY SSF52540 10 248 2.13E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06250 641138796059a14c1136959cdeacb984 370 Pfam PF08402 TOBE domain 278 347 1.2E-5 T 20-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APRE_RS06250 641138796059a14c1136959cdeacb984 370 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 301 7.4E-108 T 20-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APRE_RS06250 641138796059a14c1136959cdeacb984 370 Gene3D G3DSA:3.40.50.300 7 240 2.4E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06250 641138796059a14c1136959cdeacb984 370 PANTHER PTHR24220 11 370 5.0E-162 T 20-04-2016 APRE_RS06250 641138796059a14c1136959cdeacb984 370 PANTHER PTHR24220:SF150 11 370 5.0E-162 T 20-04-2016 APRE_RS06250 641138796059a14c1136959cdeacb984 370 SMART SM00382 34 217 5.8E-21 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06250 641138796059a14c1136959cdeacb984 370 SUPERFAMILY SSF50331 242 347 1.53E-12 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS06250 641138796059a14c1136959cdeacb984 370 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 Pfam PF01569 PAP2 superfamily 216 287 9.2E-8 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 Pfam PF01219 Prokaryotic diacylglycerol kinase 67 168 1.1E-27 T 20-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 120 131 - T 20-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 Gene3D G3DSA:1.10.3830.10 58 160 1.3E-33 T 20-04-2016 APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 Gene3D G3DSA:1.20.144.10 161 287 4.9E-7 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 SUPERFAMILY SSF48317 91 288 1.09E-11 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 PANTHER PTHR34299:SF1 47 214 2.9E-29 T 20-04-2016 APRE_RS01790 5e3fe9b601f229b53620ab55b542c92a 290 PANTHER PTHR34299 47 214 2.9E-29 T 20-04-2016 APRE_RS05900 8efffa77563995ffec86600422b3a2ec 153 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.256 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05900 8efffa77563995ffec86600422b3a2ec 153 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.4E-57 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05900 8efffa77563995ffec86600422b3a2ec 153 PANTHER PTHR21058 1 153 4.2E-79 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05900 8efffa77563995ffec86600422b3a2ec 153 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.2E-59 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05900 8efffa77563995ffec86600422b3a2ec 153 Gene3D G3DSA:3.40.50.960 5 150 1.3E-65 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05900 8efffa77563995ffec86600422b3a2ec 153 SUPERFAMILY SSF52121 7 152 4.58E-62 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 322 1.8E-28 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 Gene3D G3DSA:3.40.50.300 3 265 3.0E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 Pfam PF00005 ABC transporter 32 184 1.7E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 SUPERFAMILY SSF52540 7 256 3.69E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 PANTHER PTHR24220 8 326 4.0E-162 T 20-04-2016 APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 303 6.1E-19 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 SMART SM00382 40 234 1.1E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02480 235f4762de495753ffdb41b69c329d12 327 PANTHER PTHR24220:SF336 8 326 4.0E-162 T 20-04-2016 APRE_RS04180 e6ea18db393f9632e2d8a1d07c514c88 260 Gene3D G3DSA:3.40.50.300 60 239 8.9E-23 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04180 e6ea18db393f9632e2d8a1d07c514c88 260 PANTHER PTHR30050 68 249 2.2E-13 T 20-04-2016 APRE_RS04180 e6ea18db393f9632e2d8a1d07c514c88 260 SUPERFAMILY SSF52540 68 215 9.35E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04180 e6ea18db393f9632e2d8a1d07c514c88 260 PANTHER PTHR30050:SF7 68 249 2.2E-13 T 20-04-2016 APRE_RS04180 e6ea18db393f9632e2d8a1d07c514c88 260 Pfam PF01695 IstB-like ATP binding protein 71 232 1.1E-9 T 20-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APRE_RS04180 e6ea18db393f9632e2d8a1d07c514c88 260 SMART SM00382 100 242 0.0037 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 PANTHER PTHR24221:SF138 3 509 1.8E-53 T 20-04-2016 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 SMART SM00382 347 529 1.0E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 Pfam PF00664 ABC transporter transmembrane region 13 277 1.6E-16 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 SUPERFAMILY SSF90123 2 296 2.09E-34 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 SUPERFAMILY SSF52540 320 527 3.38E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 PANTHER PTHR24221 3 509 1.8E-53 T 20-04-2016 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 Gene3D G3DSA:1.20.1560.10 2 288 3.4E-26 T 20-04-2016 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 Pfam PF00005 ABC transporter 339 482 5.3E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01210 154ce275343963fe1b5b08f2036c99f9 530 Gene3D G3DSA:3.40.50.300 314 523 8.6E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 Pfam PF12464 Maltose acetyltransferase 6 53 1.5E-14 T 20-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 164 3.3E-10 T 20-04-2016 IPR001451 Hexapeptide repeat APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 PANTHER PTHR23416:SF58 1 203 8.7E-71 T 20-04-2016 APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 SUPERFAMILY SSF51161 2 190 1.98E-48 T 20-04-2016 IPR011004 Trimeric LpxA-like APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 SMART SM01266 4 55 5.7E-11 T 20-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 Gene3D G3DSA:2.160.10.10 2 189 5.4E-59 T 20-04-2016 APRE_RS07775 34733e2eedf928556c4553d1235005b8 203 PANTHER PTHR23416 1 203 8.7E-71 T 20-04-2016 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 212 248 5.1E-10 T 20-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 PANTHER PTHR11938 52 268 6.6E-52 T 20-04-2016 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 Pfam PF00970 Oxidoreductase FAD-binding domain 3 89 3.2E-5 T 20-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 SUPERFAMILY SSF63380 1 90 6.08E-19 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 SUPERFAMILY SSF52343 86 248 3.6E-30 T 20-04-2016 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 PANTHER PTHR11938:SF47 52 268 6.6E-52 T 20-04-2016 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 Gene3D G3DSA:3.40.50.80 97 210 3.8E-35 T 20-04-2016 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 PIRSF PIRSF006816 1 255 7.4E-65 T 20-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 APRE_RS02900 10452e37977e6571efc6bf1bcc703e08 278 Gene3D G3DSA:2.40.30.10 1 89 3.6E-22 T 20-04-2016 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 Pfam PF00512 His Kinase A (phospho-acceptor) domain 321 386 1.3E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 540 1.1E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 1.1E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 1.1E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 1.1E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 1.1E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 Gene3D G3DSA:1.10.287.130 315 372 2.9E-18 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 SUPERFAMILY SSF55785 204 311 1.71E-6 T 20-04-2016 IPR000014 PAS domain APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 SMART SM00387 431 541 3.6E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 Gene3D G3DSA:3.30.565.10 373 539 1.3E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 SMART SM00388 321 387 2.9E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 SUPERFAMILY SSF47384 307 387 5.3E-18 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 SUPERFAMILY SSF55874 376 539 1.57E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PANTHER PTHR24423 8 17 4.0E-67 T 20-04-2016 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PANTHER PTHR24423 175 194 4.0E-67 T 20-04-2016 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 PANTHER PTHR24423 213 539 4.0E-67 T 20-04-2016 APRE_RS07055 13dfdddf321d5b4a5b73b0fe03144e20 541 Gene3D G3DSA:3.30.450.20 219 311 1.8E-6 T 20-04-2016 APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 PANTHER PTHR11807 20 279 6.9E-51 T 20-04-2016 APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 SUPERFAMILY SSF52402 8 239 1.63E-31 T 20-04-2016 APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 PANTHER PTHR11807:SF17 20 279 6.9E-51 T 20-04-2016 APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 PIRSF PIRSF006661 1 276 2.2E-82 T 20-04-2016 IPR005232 Conserved hypothetical protein CHP00268 APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 8 264 1.1E-69 T 20-04-2016 IPR005232 Conserved hypothetical protein CHP00268 APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 Pfam PF02540 NAD synthase 8 91 3.9E-8 T 20-04-2016 IPR022310 NAD/GMP synthase APRE_RS08715 c9ab5cb97f4f5f2c1c0ea01d5271d60e 285 Gene3D G3DSA:3.40.50.620 4 173 1.4E-25 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS07180 7669b2b65f96cb1e62bdc3ada7c50fc6 485 PANTHER PTHR32024 1 482 2.2E-172 T 20-04-2016 APRE_RS07180 7669b2b65f96cb1e62bdc3ada7c50fc6 485 PANTHER PTHR32024:SF2 1 482 2.2E-172 T 20-04-2016 APRE_RS07180 7669b2b65f96cb1e62bdc3ada7c50fc6 485 Pfam PF02386 Cation transport protein 304 476 5.4E-29 T 20-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APRE_RS07180 7669b2b65f96cb1e62bdc3ada7c50fc6 485 Pfam PF02386 Cation transport protein 40 267 1.7E-30 T 20-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APRE_RS07180 7669b2b65f96cb1e62bdc3ada7c50fc6 485 PIRSF PIRSF006247 1 482 1.8E-143 T 20-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APRE_RS06060 efcbda1b1d69fa321332080d5def4953 134 PANTHER PTHR10245 1 100 8.2E-22 T 20-04-2016 APRE_RS06060 efcbda1b1d69fa321332080d5def4953 134 Pfam PF12844 Helix-turn-helix domain 4 66 1.6E-17 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS06060 efcbda1b1d69fa321332080d5def4953 134 Gene3D G3DSA:1.10.260.40 1 64 4.6E-28 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS06060 efcbda1b1d69fa321332080d5def4953 134 SUPERFAMILY SSF47413 1 67 1.05E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS06060 efcbda1b1d69fa321332080d5def4953 134 PANTHER PTHR10245:SF47 1 100 8.2E-22 T 20-04-2016 APRE_RS06060 efcbda1b1d69fa321332080d5def4953 134 SMART SM00530 6 61 5.0E-18 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 18 458 1.4E-169 T 20-04-2016 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 21 131 5.5E-43 T 20-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PANTHER PTHR11938:SF108 15 460 1.7E-146 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 143 446 4.6E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 SUPERFAMILY SSF51971 142 393 1.59E-67 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 Gene3D G3DSA:3.40.50.720 145 294 4.3E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PANTHER PTHR11938 15 460 1.7E-146 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 Gene3D G3DSA:3.40.50.720 295 334 1.1E-9 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 Gene3D G3DSA:1.10.1060.10 8 144 3.9E-48 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 302 7.2E-19 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 434 7.2E-19 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 164 7.2E-19 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 384 400 7.2E-19 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 SUPERFAMILY SSF46548 10 152 4.71E-37 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 284 309 2.6E-17 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 399 2.6E-17 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 434 2.6E-17 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 166 2.6E-17 T 20-04-2016 APRE_RS02895 76a71a46dd850b465638a1bc75ab80fd 463 Gene3D G3DSA:3.50.50.60 335 458 8.0E-19 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 PANTHER PTHR24220 10 323 1.3E-144 T 20-04-2016 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 SUPERFAMILY SSF52540 38 315 1.11E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 Gene3D G3DSA:3.40.50.300 7 260 1.3E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 303 9.9E-18 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 PANTHER PTHR24220:SF535 10 323 1.3E-144 T 20-04-2016 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 Pfam PF00005 ABC transporter 29 186 5.0E-25 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 8.3E-25 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS02475 2fa2fea4eb4a935db27d445611cb4ea4 332 SMART SM00382 37 244 1.3E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00630 20a244bf1f13beeb04c99d3c06c35154 238 PANTHER PTHR36434 9 237 2.7E-85 T 20-04-2016 APRE_RS00630 20a244bf1f13beeb04c99d3c06c35154 238 Pfam PF04298 Putative neutral zinc metallopeptidase 15 230 1.3E-84 T 20-04-2016 IPR007395 Putative neutral zinc metallopeptidase APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 SUPERFAMILY SSF56317 4 197 3.53E-24 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 PANTHER PTHR23090 2 580 9.3E-70 T 20-04-2016 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 Pfam PF02540 NAD synthase 300 555 7.6E-28 T 20-04-2016 IPR022310 NAD/GMP synthase APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 Gene3D G3DSA:3.40.50.620 285 571 4.4E-53 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 Gene3D G3DSA:3.60.110.10 3 257 4.6E-29 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 PIRSF PIRSF006630 2 591 8.4E-91 T 20-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 Pfam PF00795 Carbon-nitrogen hydrolase 20 185 2.6E-12 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 SUPERFAMILY SSF52402 287 574 4.66E-58 T 20-04-2016 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 PANTHER PTHR23090:SF9 2 580 9.3E-70 T 20-04-2016 APRE_RS02680 3e5ec13c895c23e03a8f4e495b7fb03b 600 TIGRFAM TIGR00552 nadE: NAD+ synthetase 302 544 3.6E-23 T 20-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APRE_RS03105 fc8cdd82c884f2d81df75fc4bbcc35dc 68 Gene3D G3DSA:1.10.260.40 7 67 1.7E-22 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS03105 fc8cdd82c884f2d81df75fc4bbcc35dc 68 PANTHER PTHR10245 7 68 1.8E-15 T 20-04-2016 APRE_RS03105 fc8cdd82c884f2d81df75fc4bbcc35dc 68 Pfam PF01381 Helix-turn-helix 11 65 3.9E-17 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS03105 fc8cdd82c884f2d81df75fc4bbcc35dc 68 SMART SM00530 10 65 1.5E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS03105 fc8cdd82c884f2d81df75fc4bbcc35dc 68 SUPERFAMILY SSF47413 3 67 1.26E-18 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1374 1626 5.8E-71 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.40.50.880 1374 1610 1.4E-17 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 5.9E-28 T 20-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 281 288 - T 20-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 PANTHER PTHR10520 1 407 6.6E-165 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.30.1330.10 695 839 2.9E-54 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.30.1330.10 627 642 2.9E-54 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.30.1490.20 118 183 1.6E-8 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 411 35.723 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SMART SM01210 321 411 3.3E-36 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.30.1330.10 1057 1213 7.1E-19 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SMART SM01211 1374 1626 2.4E-94 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF52440 1 98 4.03E-27 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 322 407 1.4E-23 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Pfam PF02769 AIR synthase related protein, C-terminal domain 850 999 2.8E-22 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF52317 1372 1626 2.53E-57 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF55326 1039 1217 2.88E-24 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.30.470.20 184 319 3.1E-47 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.40.50.20 2 89 4.0E-30 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF56059 100 307 5.77E-43 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Gene3D G3DSA:3.90.600.10 322 407 3.1E-25 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 408 9.8E-132 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF51246 320 409 1.49E-22 T 20-04-2016 IPR011054 Rudiment single hybrid motif APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF55326 711 843 4.19E-30 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF55326 604 638 4.19E-30 T 20-04-2016 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 287 1.7E-54 T 20-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SUPERFAMILY SSF56042 850 1015 7.33E-37 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 411 1626 0.0 T 20-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM APRE_RS05645 fca79bfa9c3560f9eb7ec95589cb9a1c 1631 SMART SM01209 99 287 2.5E-78 T 20-04-2016 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 PANTHER PTHR24220:SF151 4 312 3.5E-145 T 20-04-2016 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 PANTHER PTHR24220 4 312 3.5E-145 T 20-04-2016 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 Gene3D G3DSA:2.40.50.140 291 345 1.4E-6 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 Gene3D G3DSA:3.40.50.300 5 235 7.2E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 SUPERFAMILY SSF50331 237 360 9.92E-21 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 SMART SM00382 29 212 2.8E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 Gene3D G3DSA:2.40.50.100 346 360 3.8E-12 T 20-04-2016 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 Gene3D G3DSA:2.40.50.100 240 287 3.8E-12 T 20-04-2016 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 Pfam PF00005 ABC transporter 21 162 2.8E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 Pfam PF08402 TOBE domain 281 352 1.9E-5 T 20-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APRE_RS00680 3dbea5acb1f2e68920f29a7e59a45daf 361 SUPERFAMILY SSF52540 4 243 2.66E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05240 f373bbb1fe0ca7a9361d9975ca6c0746 183 Gene3D G3DSA:3.90.79.10 9 177 5.7E-55 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS05240 f373bbb1fe0ca7a9361d9975ca6c0746 183 PANTHER PTHR11839 9 176 6.2E-52 T 20-04-2016 APRE_RS05240 f373bbb1fe0ca7a9361d9975ca6c0746 183 PANTHER PTHR11839:SF9 9 176 6.2E-52 T 20-04-2016 APRE_RS05240 f373bbb1fe0ca7a9361d9975ca6c0746 183 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APRE_RS05240 f373bbb1fe0ca7a9361d9975ca6c0746 183 Pfam PF00293 NUDIX domain 44 162 7.4E-17 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APRE_RS05240 f373bbb1fe0ca7a9361d9975ca6c0746 183 SUPERFAMILY SSF55811 11 176 1.62E-45 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 Pfam PF04055 Radical SAM superfamily 94 231 4.4E-9 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 SUPERFAMILY SSF102114 48 333 4.45E-40 T 20-04-2016 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 PANTHER PTHR22976:SF17 8 383 2.2E-123 T 20-04-2016 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 SMART SM00876 270 377 7.4E-15 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 Gene3D G3DSA:3.20.20.70 49 378 2.5E-41 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 30 384 6.4E-126 T 20-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 PANTHER PTHR22976 8 383 2.2E-123 T 20-04-2016 APRE_RS08350 e7f7811f6f5bd52f16d98a3b9e449717 385 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 270 375 2.6E-17 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APRE_RS07865 02c972abad4ff9713a188a7880347427 246 Pfam PF00005 ABC transporter 20 168 3.1E-37 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07865 02c972abad4ff9713a188a7880347427 246 SMART SM00382 29 216 7.3E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07865 02c972abad4ff9713a188a7880347427 246 SUPERFAMILY SSF52540 4 238 7.14E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07865 02c972abad4ff9713a188a7880347427 246 PANTHER PTHR24220 6 243 6.1E-128 T 20-04-2016 APRE_RS07865 02c972abad4ff9713a188a7880347427 246 PIRSF PIRSF039085 1 244 3.2E-110 T 20-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APRE_RS07865 02c972abad4ff9713a188a7880347427 246 PANTHER PTHR24220:SF327 6 243 6.1E-128 T 20-04-2016 APRE_RS07865 02c972abad4ff9713a188a7880347427 246 Gene3D G3DSA:3.40.50.300 4 240 6.7E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07865 02c972abad4ff9713a188a7880347427 246 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 SUPERFAMILY SSF51395 25 331 4.92E-68 T 20-04-2016 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 325 1.0E-104 T 20-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 Pfam PF01070 FMN-dependent dehydrogenase 26 93 7.6E-6 T 20-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 Pfam PF01070 FMN-dependent dehydrogenase 166 322 6.1E-16 T 20-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 PANTHER PTHR10578 26 214 6.8E-97 T 20-04-2016 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 PANTHER PTHR10578 232 333 6.8E-97 T 20-04-2016 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 Gene3D G3DSA:3.20.20.70 23 325 8.7E-109 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 PANTHER PTHR10578:SF3 26 214 6.8E-97 T 20-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 PANTHER PTHR10578:SF3 232 333 6.8E-97 T 20-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 PIRSF PIRSF003314 1 336 6.7E-109 T 20-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APRE_RS00970 145c4e1b509d6ca286fde948621a5740 336 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 329 34.689 T 20-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APRE_RS08355 0a29ac294e81a738108348c0679f7e02 256 SUPERFAMILY SSF110399 5 236 1.83E-71 T 20-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APRE_RS08355 0a29ac294e81a738108348c0679f7e02 256 PANTHER PTHR34266 1 254 3.0E-126 T 20-04-2016 APRE_RS08355 0a29ac294e81a738108348c0679f7e02 256 Gene3D G3DSA:3.20.20.70 7 239 1.3E-45 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS08355 0a29ac294e81a738108348c0679f7e02 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 9 250 1.4E-97 T 20-04-2016 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 SUPERFAMILY SSF51445 125 446 1.36E-31 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 PANTHER PTHR10357 13 529 4.7E-34 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 SMART SM00642 125 459 0.0016 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 18 92 1.5E-10 T 20-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 SUPERFAMILY SSF81296 12 103 5.42E-18 T 20-04-2016 IPR014756 Immunoglobulin E-set APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 PANTHER PTHR10357:SF110 13 529 4.7E-34 T 20-04-2016 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 476 529 1.2E-4 T 20-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 PIRSF PIRSF000463 2 542 4.6E-70 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 Gene3D G3DSA:3.20.20.80 119 451 1.1E-31 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 Gene3D G3DSA:2.60.40.10 8 107 2.0E-21 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 Gene3D G3DSA:2.60.40.1180 472 550 5.2E-7 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS04070 0beaee8758873ae9df7d9c4f5596ad56 551 SUPERFAMILY SSF51011 472 513 2.52E-6 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Pfam PF14520 Helix-hairpin-helix domain 441 493 0.0029 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Gene3D G3DSA:3.30.470.30 125 248 1.5E-36 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Gene3D G3DSA:2.40.50.140 317 388 2.1E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 656 1.0E-207 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Gene3D G3DSA:1.10.150.20 498 577 3.9E-26 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SUPERFAMILY SSF56091 2 312 9.12E-94 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 PANTHER PTHR23389:SF9 1 526 4.5E-141 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Hamap MF_01588 DNA ligase [ligA]. 1 660 43.044 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Gene3D G3DSA:3.40.50.10190 585 662 4.4E-21 T 20-04-2016 IPR001357 BRCT domain APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 PIRSF PIRSF001604 1 664 1.2E-220 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Pfam PF12826 Helix-hairpin-helix motif 505 567 6.9E-23 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 394 2.5E-27 T 20-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SUPERFAMILY SSF50249 314 394 1.71E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 PANTHER PTHR23389 1 526 4.5E-141 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SMART SM00278 538 557 0.11 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SMART SM00278 440 459 27.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SMART SM00278 506 525 1300.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SMART SM00278 474 493 100.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Gene3D G3DSA:1.10.287.610 3 65 6.9E-19 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Gene3D G3DSA:1.10.150.20 429 497 1.9E-24 T 20-04-2016 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 315 8.8E-89 T 20-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SMART SM00292 586 663 4.4E-11 T 20-04-2016 IPR001357 BRCT domain APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SMART SM00532 2 442 2.8E-168 T 20-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SUPERFAMILY SSF52113 585 661 9.16E-17 T 20-04-2016 IPR001357 BRCT domain APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 588 651 1.7E-13 T 20-04-2016 IPR001357 BRCT domain APRE_RS05010 39c5462340902a55b37a575a5228b8d4 666 SUPERFAMILY SSF47781 401 577 7.78E-55 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS00825 1cbb307814c489b1e4900e133bc69482 118 SUPERFAMILY SSF88659 35 87 4.86E-7 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00825 1cbb307814c489b1e4900e133bc69482 118 Pfam PF09862 Protein of unknown function (DUF2089) 5 112 8.6E-39 T 20-04-2016 IPR018658 Protein of unknown function DUF2089 APRE_RS00825 1cbb307814c489b1e4900e133bc69482 118 Gene3D G3DSA:1.10.10.10 33 82 4.9E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Gene3D G3DSA:1.10.8.60 507 588 7.1E-29 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Gene3D G3DSA:3.30.230.10 594 774 4.0E-72 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 SUPERFAMILY SSF52540 308 579 6.7E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PANTHER PTHR10046 13 776 0.0 T 20-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 TIGRFAM TIGR00763 lon: endopeptidase La 14 775 8.5E-264 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 2.4E-51 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 2.4E-51 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 361 380 2.4E-51 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 2.4E-51 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 2.4E-51 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 SUPERFAMILY SSF88697 13 204 1.91E-19 T 20-04-2016 IPR015947 PUA-like domain APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PANTHER PTHR10046:SF24 13 776 0.0 T 20-04-2016 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 SMART SM00382 353 498 4.6E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 205 1.8E-20 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 SMART SM00464 11 206 1.5E-23 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 20-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Gene3D G3DSA:3.40.50.300 311 506 5.1E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Hamap MF_01973 Lon protease [lon]. 12 776 61.175 T 20-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 9.1E-90 T 20-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 357 493 1.4E-21 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 PIRSF PIRSF001174 2 776 5.6E-283 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APRE_RS02030 61acf0f2c745befa23da43a8362bf6cd 776 SUPERFAMILY SSF54211 599 774 6.45E-55 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS04600 9b149e287f65eaa4186dbf65d3ed4624 156 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 147 1.4E-23 T 20-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APRE_RS04600 9b149e287f65eaa4186dbf65d3ed4624 156 SUPERFAMILY SSF56300 1 147 4.88E-38 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04600 9b149e287f65eaa4186dbf65d3ed4624 156 Gene3D G3DSA:3.60.21.10 1 155 8.0E-33 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04600 9b149e287f65eaa4186dbf65d3ed4624 156 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 146 3.2E-27 T 20-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APRE_RS04600 9b149e287f65eaa4186dbf65d3ed4624 156 PANTHER PTHR11124 1 156 8.3E-29 T 20-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APRE_RS04600 9b149e287f65eaa4186dbf65d3ed4624 156 PANTHER PTHR11124:SF14 1 156 8.3E-29 T 20-04-2016 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 TIGRFAM TIGR00400 mgtE: magnesium transporter 15 452 2.6E-134 T 20-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Gene3D G3DSA:1.25.60.10 7 126 2.1E-27 T 20-04-2016 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Pfam PF03448 MgtE intracellular N domain 34 134 4.6E-25 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Gene3D G3DSA:1.10.357.20 279 451 1.5E-57 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 PANTHER PTHR41394 7 454 5.5E-41 T 20-04-2016 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 SMART SM00924 33 136 1.3E-27 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 SUPERFAMILY SSF161093 279 451 3.53E-50 T 20-04-2016 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 SMART SM00116 143 196 100.0 T 20-04-2016 IPR000644 CBS domain APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 SMART SM00116 207 255 4.6E-8 T 20-04-2016 IPR000644 CBS domain APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Pfam PF01769 Divalent cation transporter 322 445 1.0E-31 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Gene3D G3DSA:3.10.580.10 127 262 1.4E-24 T 20-04-2016 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Pfam PF00571 CBS domain 137 192 3.3E-6 T 20-04-2016 IPR000644 CBS domain APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 Pfam PF00571 CBS domain 206 251 5.6E-10 T 20-04-2016 IPR000644 CBS domain APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 SUPERFAMILY SSF158791 9 133 6.8E-27 T 20-04-2016 APRE_RS01470 0082dbba20c31445f884ef9836007a69 456 SUPERFAMILY SSF54631 136 273 3.66E-32 T 20-04-2016 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 SUPERFAMILY SSF116726 372 450 1.7E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 SUPERFAMILY SSF51735 230 363 7.56E-26 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 SUPERFAMILY SSF116726 134 220 8.89E-14 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Gene3D G3DSA:3.40.50.720 229 363 1.1E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PANTHER PTHR13789 1 455 7.9E-27 T 20-04-2016 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.3E-13 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.3E-13 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.3E-13 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.3E-13 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.3E-13 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Pfam PF02080 TrkA-C domain 152 220 1.7E-11 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Pfam PF02080 TrkA-C domain 384 450 3.8E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 PANTHER PTHR13789:SF225 1 455 7.9E-27 T 20-04-2016 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Gene3D G3DSA:3.30.70.1450 380 452 7.6E-9 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Gene3D G3DSA:3.30.70.1450 150 221 1.7E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 SUPERFAMILY SSF51735 1 147 3.94E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Gene3D G3DSA:3.40.50.720 1 148 9.3E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Pfam PF02254 TrkA-N domain 3 122 4.8E-23 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APRE_RS07185 9d5fa9dbf4cf1e453c2fc085bb20c6af 455 Pfam PF02254 TrkA-N domain 232 348 5.7E-19 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 PANTHER PTHR22748 1 274 9.5E-90 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 234 245 - T 20-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 207 223 - T 20-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 20-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 274 6.6E-79 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 273 2.4E-58 T 20-04-2016 APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 252 5.0E-26 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 Gene3D G3DSA:3.60.10.10 1 273 1.9E-77 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APRE_RS03060 08eaf65e607c79b3cda8c29700bebdb6 274 SUPERFAMILY SSF56219 1 274 1.44E-58 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APRE_RS05790 536757204e8d65ac628006659c165752 287 SMART SM00342 199 282 3.5E-25 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS05790 536757204e8d65ac628006659c165752 287 SUPERFAMILY SSF46689 182 232 9.86E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS05790 536757204e8d65ac628006659c165752 287 SUPERFAMILY SSF51215 22 168 4.84E-11 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS05790 536757204e8d65ac628006659c165752 287 PANTHER PTHR11019:SF11 32 287 2.4E-30 T 20-04-2016 APRE_RS05790 536757204e8d65ac628006659c165752 287 Gene3D G3DSA:1.10.10.60 182 236 1.1E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS05790 536757204e8d65ac628006659c165752 287 Gene3D G3DSA:1.10.10.60 237 286 6.6E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS05790 536757204e8d65ac628006659c165752 287 SUPERFAMILY SSF46689 236 286 2.02E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS05790 536757204e8d65ac628006659c165752 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 9.0E-7 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APRE_RS05790 536757204e8d65ac628006659c165752 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 9.0E-7 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APRE_RS05790 536757204e8d65ac628006659c165752 287 Pfam PF02311 AraC-like ligand binding domain 39 101 4.5E-6 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS05790 536757204e8d65ac628006659c165752 287 Gene3D G3DSA:2.60.120.280 33 170 1.0E-10 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS05790 536757204e8d65ac628006659c165752 287 Pfam PF12833 Helix-turn-helix domain 206 283 4.9E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APRE_RS05790 536757204e8d65ac628006659c165752 287 PANTHER PTHR11019 32 287 2.4E-30 T 20-04-2016 APRE_RS05790 536757204e8d65ac628006659c165752 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APRE_RS04030 05827f2c8126893655428edcf2107057 312 Gene3D G3DSA:3.40.50.1370 143 290 5.1E-51 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 306 35.348 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 Gene3D G3DSA:3.40.50.1370 5 142 1.1E-48 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 301 2.3E-29 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 144 3.6E-40 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 304 1.1E-102 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 1.5E-33 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00101 Aspartate carbamoyltransferase signature 224 233 1.5E-33 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00101 Aspartate carbamoyltransferase signature 77 86 1.5E-33 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00101 Aspartate carbamoyltransferase signature 263 268 1.5E-33 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 1.5E-33 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 1.5E-33 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 1.4E-24 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.4E-24 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 1.4E-24 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 1.4E-24 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PANTHER PTHR11405:SF16 5 304 3.7E-127 T 20-04-2016 APRE_RS04030 05827f2c8126893655428edcf2107057 312 PANTHER PTHR11405 5 304 3.7E-127 T 20-04-2016 APRE_RS04030 05827f2c8126893655428edcf2107057 312 SUPERFAMILY SSF53671 3 305 1.9E-93 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS04485 6c571cf5d64816758b61898818176275 503 Gene3D G3DSA:3.40.710.10 183 500 2.6E-97 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS04485 6c571cf5d64816758b61898818176275 503 Pfam PF00905 Penicillin binding protein transpeptidase domain 194 495 7.7E-68 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APRE_RS04485 6c571cf5d64816758b61898818176275 503 Gene3D G3DSA:3.90.1310.10 112 182 7.5E-11 T 20-04-2016 APRE_RS04485 6c571cf5d64816758b61898818176275 503 PANTHER PTHR30627 116 502 1.2E-99 T 20-04-2016 APRE_RS04485 6c571cf5d64816758b61898818176275 503 SUPERFAMILY SSF56601 136 501 2.71E-91 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS09105 29bc4c3ab8049d2608b303b6cc59efdd 244 Gene3D G3DSA:1.20.1250.20 2 134 8.0E-14 T 20-04-2016 APRE_RS09105 29bc4c3ab8049d2608b303b6cc59efdd 244 PANTHER PTHR23513:SF4 2 244 3.0E-32 T 20-04-2016 APRE_RS09105 29bc4c3ab8049d2608b303b6cc59efdd 244 PANTHER PTHR23513 2 244 3.0E-32 T 20-04-2016 APRE_RS09105 29bc4c3ab8049d2608b303b6cc59efdd 244 SUPERFAMILY SSF103473 2 241 6.93E-23 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS09105 29bc4c3ab8049d2608b303b6cc59efdd 244 Pfam PF07690 Major Facilitator Superfamily 2 241 1.6E-15 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 SUPERFAMILY SSF47973 7 149 1.7E-59 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.184 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 7.1E-64 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 20-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.3E-67 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 Gene3D G3DSA:1.10.455.10 8 156 1.9E-63 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 PANTHER PTHR11205 1 156 2.5E-80 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APRE_RS02430 0e463a8438ae5f08f43c448fe4cc7c95 156 PIRSF PIRSF002122 2 156 6.6E-57 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APRE_RS06200 6d179d0a62aecfd1b80250f3426a4cd1 307 Pfam PF04471 Restriction endonuclease 181 286 2.7E-7 T 20-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 APRE_RS06200 6d179d0a62aecfd1b80250f3426a4cd1 307 Gene3D G3DSA:3.40.1350.10 179 286 7.8E-9 T 20-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APRE_RS06200 6d179d0a62aecfd1b80250f3426a4cd1 307 SUPERFAMILY SSF52980 181 288 3.75E-6 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 114 2.2E-38 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 SUPERFAMILY SSF81330 11 114 2.88E-33 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 108 8.2E-35 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 20-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 PANTHER PTHR30266 1 126 1.6E-43 T 20-04-2016 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 PANTHER PTHR30266:SF2 1 126 1.6E-43 T 20-04-2016 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 4.5E-10 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 4.5E-10 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APRE_RS06535 eff5428dd400f2b3011037e38815f960 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 4.5E-10 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 Gene3D G3DSA:1.10.45.10 431 470 5.9E-9 T 20-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 Pfam PF01565 FAD binding domain 46 183 4.0E-41 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 PANTHER PTHR11748:SF35 8 474 1.4E-138 T 20-04-2016 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 Gene3D G3DSA:3.30.43.10 3 100 4.9E-24 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 SUPERFAMILY SSF55103 225 471 6.7E-51 T 20-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 PANTHER PTHR11748 8 474 1.4E-138 T 20-04-2016 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 Gene3D G3DSA:3.30.465.10 101 221 2.0E-39 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 470 5.4E-54 T 20-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APRE_RS06955 08cad701dac135ed8672bdf0d42e463a 474 SUPERFAMILY SSF56176 5 221 3.5E-65 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 SUPERFAMILY SSF47413 2 58 1.18E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 PANTHER PTHR30146 1 332 1.3E-58 T 20-04-2016 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 SMART SM00354 1 70 1.2E-25 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 SUPERFAMILY SSF53822 58 326 1.61E-33 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 Gene3D G3DSA:3.40.50.2300 53 173 8.3E-28 T 20-04-2016 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 5.1E-17 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 Pfam PF13377 Periplasmic binding protein-like domain 248 332 2.7E-9 T 20-04-2016 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 Gene3D G3DSA:3.40.50.2300 174 332 3.6E-18 T 20-04-2016 APRE_RS07110 3a2e07c195670b0d6a08bf33edc1d52c 332 Gene3D G3DSA:1.10.260.40 2 52 1.4E-22 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PIRSF PIRSF000722 1 397 2.2E-158 T 20-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 Gene3D G3DSA:3.30.420.40 205 394 9.9E-80 T 20-04-2016 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PRINTS PR00471 Acetate kinase family signature 322 338 2.8E-44 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PRINTS PR00471 Acetate kinase family signature 173 186 2.8E-44 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PRINTS PR00471 Acetate kinase family signature 203 224 2.8E-44 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PRINTS PR00471 Acetate kinase family signature 376 388 2.8E-44 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PRINTS PR00471 Acetate kinase family signature 300 313 2.8E-44 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PRINTS PR00471 Acetate kinase family signature 3 14 2.8E-44 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 Pfam PF00871 Acetokinase family 2 389 1.1E-158 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 393 2.5E-164 T 20-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PANTHER PTHR21060:SF11 1 396 3.7E-213 T 20-04-2016 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 PANTHER PTHR21060 1 396 3.7E-213 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 SUPERFAMILY SSF53067 158 394 5.46E-91 T 20-04-2016 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 186.161 T 20-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 20-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 20-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 SUPERFAMILY SSF53067 1 196 1.94E-67 T 20-04-2016 APRE_RS03420 9be54a83e4f407bb562c13bae64d2a2e 397 Gene3D G3DSA:3.30.420.40 66 204 8.1E-11 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SUPERFAMILY SSF52540 526 700 1.44E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SUPERFAMILY SSF52540 421 485 1.44E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Pfam PF13538 UvrD-like helicase C-terminal domain 637 683 1.0E-17 T 20-04-2016 IPR027785 UvrD-like helicase C-terminal domain APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Gene3D G3DSA:1.10.150.20 87 130 4.0E-4 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Gene3D G3DSA:3.40.50.300 131 157 2.3E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Gene3D G3DSA:3.40.50.300 628 688 2.3E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 3 706 4.5E-193 T 20-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SMART SM00278 179 198 280.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SMART SM00278 115 134 7.9 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SMART SM00278 80 101 180.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 1 719 25.821 T 20-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Pfam PF14490 Helix-hairpin-helix containing domain 139 228 1.0E-28 T 20-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SUPERFAMILY SSF52540 176 467 1.59E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Pfam PF14520 Helix-hairpin-helix domain 87 137 3.6E-9 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 PANTHER PTHR10887:SF284 637 719 2.7E-96 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 PANTHER PTHR10887:SF284 248 553 2.7E-96 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Gene3D G3DSA:3.40.50.300 306 487 1.0E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 SUPERFAMILY SSF47781 73 132 1.01E-7 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 Pfam PF13604 AAA domain 311 487 7.6E-42 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 PANTHER PTHR10887 637 719 2.7E-96 T 20-04-2016 APRE_RS03920 b31c0ab8f0004e0ada29c1087dd2124a 719 PANTHER PTHR10887 248 553 2.7E-96 T 20-04-2016 APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 Pfam PF13347 MFS/sugar transport protein 15 446 6.0E-87 T 20-04-2016 APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 PANTHER PTHR11328 10 462 2.6E-84 T 20-04-2016 APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 SUPERFAMILY SSF103473 14 448 1.4E-32 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 Gene3D G3DSA:1.20.1250.20 21 218 1.1E-8 T 20-04-2016 APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 Gene3D G3DSA:1.20.1250.20 244 454 2.4E-15 T 20-04-2016 APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 PANTHER PTHR11328:SF24 10 462 2.6E-84 T 20-04-2016 APRE_RS08160 95352368d515e300bce9f9bf8fada622 464 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 458 9.3E-96 T 20-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 Gene3D G3DSA:3.30.230.10 282 452 1.8E-20 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 Pfam PF13481 AAA domain 67 220 7.1E-15 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PRINTS PR01874 DNA repair protein radA signature 10 34 4.5E-58 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PRINTS PR01874 DNA repair protein radA signature 320 343 4.5E-58 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PRINTS PR01874 DNA repair protein radA signature 77 105 4.5E-58 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PRINTS PR01874 DNA repair protein radA signature 211 239 4.5E-58 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PRINTS PR01874 DNA repair protein radA signature 246 272 4.5E-58 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PRINTS PR01874 DNA repair protein radA signature 119 136 4.5E-58 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 SUPERFAMILY SSF54211 301 452 2.2E-23 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 SUPERFAMILY SSF54211 253 267 2.2E-23 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 SUPERFAMILY SSF52540 62 289 1.34E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 1.1E-132 T 20-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PANTHER PTHR32472 1 453 1.8E-126 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 Gene3D G3DSA:3.40.50.300 55 275 3.8E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 PANTHER PTHR32472:SF10 1 453 1.8E-126 T 20-04-2016 APRE_RS00695 f02d3e6fcc0efbb0d6bb2780eff550e5 456 SMART SM00382 85 242 3.9E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 Pfam PF01895 PhoU domain 356 436 2.1E-7 T 20-04-2016 IPR026022 PhoU domain APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 Pfam PF01895 PhoU domain 457 541 1.8E-9 T 20-04-2016 IPR026022 PhoU domain APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 Pfam PF02690 Na+/Pi-cotransporter 149 264 9.0E-21 T 20-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 Pfam PF02690 Na+/Pi-cotransporter 20 155 1.8E-47 T 20-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 PANTHER PTHR10010 14 457 1.2E-89 T 20-04-2016 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 PANTHER PTHR10010:SF26 14 457 1.2E-89 T 20-04-2016 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 Gene3D G3DSA:1.20.58.220 450 543 8.7E-15 T 20-04-2016 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 Gene3D G3DSA:1.20.58.220 340 443 3.5E-8 T 20-04-2016 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 16 318 4.9E-68 T 20-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 APRE_RS08850 8b7fc9ba052fcf0e196fab1fdfcf39a9 564 SUPERFAMILY SSF109755 338 544 7.33E-29 T 20-04-2016 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 156 1.1E-12 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 PANTHER PTHR11649:SF37 260 682 1.4E-243 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 PANTHER PTHR11649:SF37 2 144 1.4E-243 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 643 5.9E-172 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-6 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.1E-6 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 PANTHER PTHR11649 260 682 1.4E-243 T 20-04-2016 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 PANTHER PTHR11649 2 144 1.4E-243 T 20-04-2016 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 Pfam PF07670 Nucleoside recognition 352 446 4.0E-11 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 Pfam PF07670 Nucleoside recognition 514 645 6.6E-28 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 Pfam PF07664 Ferrous iron transport protein B C terminus 457 509 9.0E-18 T 20-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 Gene3D G3DSA:3.40.50.300 4 161 2.6E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 Pfam PF02421 Ferrous iron transport protein B 4 155 2.2E-65 T 20-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 APRE_RS07485 ba9eb62925cde4fc13a41480d2bd4c97 716 SUPERFAMILY SSF52540 3 166 3.49E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 255 4.2E-40 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 SUPERFAMILY SSF52540 2 595 2.01E-98 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 Pfam PF13361 UvrD-like helicase C-terminal domain 261 577 8.7E-29 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 Gene3D G3DSA:3.40.50.300 265 370 1.4E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 Gene3D G3DSA:3.40.50.300 512 595 1.4E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 PANTHER PTHR11070 1 593 6.0E-92 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS05360 fc3b8f95d186a62d113a3335f2377970 597 Gene3D G3DSA:3.40.50.300 2 259 1.5E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Pfam PF13155 Toprim-like 253 338 4.2E-18 T 20-04-2016 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Gene3D G3DSA:3.40.1360.10 234 354 5.6E-39 T 20-04-2016 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 SUPERFAMILY SSF57783 1 100 9.52E-36 T 20-04-2016 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 242 3.0E-39 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Pfam PF01807 CHC2 zinc finger 5 100 1.4E-37 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 SUPERFAMILY SSF56731 111 411 1.57E-91 T 20-04-2016 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Hamap MF_00974 DNA primase [dnaG]. 3 543 26.82 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 TIGRFAM TIGR01391 dnaG: DNA primase 4 406 5.2E-135 T 20-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 PANTHER PTHR30313 2 544 1.4E-132 T 20-04-2016 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 PIRSF PIRSF002811 1 543 9.0E-154 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Gene3D G3DSA:3.90.580.10 3 100 8.5E-39 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 SMART SM00493 250 321 2.7E-16 T 20-04-2016 IPR006171 Toprim domain APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 Gene3D G3DSA:3.90.980.10 110 233 2.9E-43 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APRE_RS05785 69d1bdf88cbf2edf3f40978338ab913e 544 SMART SM00400 35 89 1.1E-32 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 SUPERFAMILY SSF56112 186 323 7.15E-23 T 20-04-2016 IPR011009 Protein kinase-like domain APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 SUPERFAMILY SSF56112 85 151 7.15E-23 T 20-04-2016 IPR011009 Protein kinase-like domain APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 Pfam PF00069 Protein kinase domain 231 309 1.8E-6 T 20-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 PANTHER PTHR10566:SF10 4 544 1.2E-106 T 20-04-2016 APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 Pfam PF03109 ABC1 family 103 224 2.1E-22 T 20-04-2016 IPR004147 UbiB domain APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 PANTHER PTHR10566 4 544 1.2E-106 T 20-04-2016 APRE_RS00295 28bc96bbdb71227350e7e7bd0e366c59 545 Gene3D G3DSA:3.90.1200.10 181 303 1.1E-10 T 20-04-2016 APRE_RS01585 8a96c6b5c561f5287899600b3392e32c 457 Pfam PF12704 MacB-like periplasmic core domain 21 152 7.8E-7 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APRE_RS01585 8a96c6b5c561f5287899600b3392e32c 457 Pfam PF02687 FtsX-like permease family 327 449 7.2E-20 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APRE_RS01585 8a96c6b5c561f5287899600b3392e32c 457 PANTHER PTHR30572 274 457 3.9E-42 T 20-04-2016 APRE_RS01585 8a96c6b5c561f5287899600b3392e32c 457 PANTHER PTHR30572 162 255 3.9E-42 T 20-04-2016 APRE_RS01585 8a96c6b5c561f5287899600b3392e32c 457 PANTHER PTHR30572 1 110 3.9E-42 T 20-04-2016 APRE_RS05035 2f10824e72a524516c41300046688c3b 89 Gene3D G3DSA:3.30.70.100 1 87 1.4E-24 T 20-04-2016 APRE_RS05035 2f10824e72a524516c41300046688c3b 89 PANTHER PTHR10029 1 88 2.5E-17 T 20-04-2016 APRE_RS05035 2f10824e72a524516c41300046688c3b 89 PANTHER PTHR10029:SF4 1 88 2.5E-17 T 20-04-2016 APRE_RS05035 2f10824e72a524516c41300046688c3b 89 SUPERFAMILY SSF54975 1 88 5.23E-23 T 20-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APRE_RS05035 2f10824e72a524516c41300046688c3b 89 Pfam PF00708 Acylphosphatase 1 87 7.4E-23 T 20-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 7.2E-91 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 SMART SM00322 60 126 7.2E-4 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 Gene3D G3DSA:3.30.300.20 17 108 1.7E-31 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 1.0E-39 T 20-04-2016 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 20-04-2016 IPR018280 Ribosomal protein S3, conserved site APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 36.909 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 SUPERFAMILY SSF54821 109 207 5.1E-38 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 SUPERFAMILY SSF54814 2 107 3.4E-37 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 Pfam PF07650 KH domain 39 108 1.2E-14 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 PANTHER PTHR11760 2 237 5.5E-124 T 20-04-2016 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 PANTHER PTHR11760:SF19 2 237 5.5E-124 T 20-04-2016 APRE_RS08040 ad306f865edf3b5c70407c9570678da2 238 Gene3D G3DSA:3.30.1140.32 111 208 1.4E-43 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS00745 9eed97c7fd30f56ad51a7652c75b9e63 518 SUPERFAMILY SSF53850 60 512 1.75E-57 T 20-04-2016 APRE_RS00745 9eed97c7fd30f56ad51a7652c75b9e63 518 SUPERFAMILY SSF53850 22 29 1.75E-57 T 20-04-2016 APRE_RS00745 9eed97c7fd30f56ad51a7652c75b9e63 518 Gene3D G3DSA:3.40.190.10 54 234 1.1E-23 T 20-04-2016 APRE_RS00745 9eed97c7fd30f56ad51a7652c75b9e63 518 Pfam PF13416 Bacterial extracellular solute-binding protein 89 376 3.2E-17 T 20-04-2016 APRE_RS00745 9eed97c7fd30f56ad51a7652c75b9e63 518 Pfam PF12010 Domain of unknown function (DUF3502) 378 513 1.1E-29 T 20-04-2016 IPR022627 Domain of unknown function DUF3502 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 Pfam PF01029 NusB family 21 120 1.6E-20 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PANTHER PTHR22807:SF30 39 427 1.4E-94 T 20-04-2016 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 Gene3D G3DSA:3.40.50.150 232 426 1.1E-52 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.7E-23 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.7E-23 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 221 235 2.7E-23 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 408 425 2.7E-23 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 250 260 2.7E-23 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 SUPERFAMILY SSF48013 16 145 1.57E-20 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 SUPERFAMILY SSF53335 132 426 1.24E-63 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 Pfam PF01189 16S rRNA methyltransferase RsmB/F 240 424 2.5E-49 T 20-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 Gene3D G3DSA:1.10.940.10 35 145 3.8E-26 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 34 426 2.0E-88 T 20-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 Gene3D G3DSA:3.30.70.1170 173 229 3.6E-7 T 20-04-2016 APRE_RS03465 9d26eb38ee0a6f59bcf1d3acd4ea43b1 430 PANTHER PTHR22807 39 427 1.4E-94 T 20-04-2016 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 870 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 PANTHER PTHR22931 4 876 0.0 T 20-04-2016 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 503 2.8E-26 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 SUPERFAMILY SSF51621 512 870 8.05E-126 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 760 778 - T 20-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:3.30.1490.20 200 243 2.0E-58 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:3.30.1490.20 4 111 2.0E-58 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 PIRSF PIRSF000853 2 876 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 294 7.0E-49 T 20-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 303 356 1.7E-11 T 20-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:3.20.20.60 533 871 1.1E-137 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 450 461 - T 20-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:3.30.470.20 244 341 7.9E-40 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 SUPERFAMILY SSF56059 1 379 1.29E-145 T 20-04-2016 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:3.50.30.10 401 506 2.8E-39 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 518 868 9.3E-92 T 20-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 SUPERFAMILY SSF52009 386 512 8.24E-36 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 PANTHER PTHR22931:SF9 4 876 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:1.10.189.10 342 400 2.7E-29 T 20-04-2016 APRE_RS06315 17ef1effc50a5ac930d2e3717c289be6 876 Gene3D G3DSA:1.20.80.30 112 198 7.6E-36 T 20-04-2016 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 SUPERFAMILY SSF53784 1 401 2.75E-78 T 20-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PANTHER PTHR13697 90 366 4.0E-27 T 20-04-2016 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PIRSF PIRSF036483 1 405 2.8E-96 T 20-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 395 35.267 T 20-04-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 Pfam PF00365 Phosphofructokinase 5 320 2.3E-52 T 20-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 5.2E-16 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 101 117 5.2E-16 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 135 152 5.2E-16 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 234 246 5.2E-16 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 175 191 5.2E-16 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 153 171 5.2E-16 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 Gene3D G3DSA:3.40.50.450 1 236 1.5E-56 T 20-04-2016 APRE_RS08140 cdacac08621107f45e3fb65ec7203db7 406 PANTHER PTHR13697:SF19 90 366 4.0E-27 T 20-04-2016 APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 Pfam PF00107 Zinc-binding dehydrogenase 173 294 2.9E-21 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 Gene3D G3DSA:3.40.50.720 164 282 3.8E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 PANTHER PTHR11695 12 335 1.5E-90 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 PANTHER PTHR11695:SF38 12 335 1.5E-90 T 20-04-2016 APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 Gene3D G3DSA:3.90.180.10 1 163 5.2E-54 T 20-04-2016 IPR011032 GroES-like APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 9.1E-37 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 SMART SM00829 4 335 4.3E-4 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 SUPERFAMILY SSF50129 1 171 1.22E-48 T 20-04-2016 IPR011032 GroES-like APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 SUPERFAMILY SSF51735 141 301 1.6E-30 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08265 72206e54c43f0134ec99e346c2cd015e 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 20-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 SUPERFAMILY SSF52540 10 177 2.96E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 2 377 6.1E-140 T 20-04-2016 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 Gene3D G3DSA:3.40.50.300 11 161 8.4E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 PANTHER PTHR11649 2 136 2.8E-36 T 20-04-2016 APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 Pfam PF01926 50S ribosome-binding GTPase 11 119 1.1E-19 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 PANTHER PTHR11649:SF59 2 136 2.8E-36 T 20-04-2016 APRE_RS01495 4cad877e82db5e2f727c5c8f81001bf2 382 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 140 3.9E-17 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 Gene3D G3DSA:3.30.70.1350 225 303 6.9E-18 T 20-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 Gene3D G3DSA:1.20.1510.10 31 223 2.3E-36 T 20-04-2016 IPR027469 Cation efflux protein transmembrane domain APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 Pfam PF01545 Cation efflux family 32 223 1.0E-37 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 304 2.8E-54 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 PANTHER PTHR11562:SF57 22 303 7.3E-70 T 20-04-2016 APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 SUPERFAMILY SSF161111 28 224 6.15E-44 T 20-04-2016 APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 Pfam PF16916 Dimerisation domain of Zinc Transporter 228 303 4.3E-14 T 20-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 PANTHER PTHR11562 22 303 7.3E-70 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APRE_RS03900 abaa8b3bc71bb2f9e2ffad1ec727558e 311 SUPERFAMILY SSF160240 227 304 1.24E-15 T 20-04-2016 APRE_RS08375 6d14a9d179650268a5640eb1ee811bb5 139 Gene3D G3DSA:3.90.1010.10 6 139 4.4E-38 T 20-04-2016 APRE_RS08375 6d14a9d179650268a5640eb1ee811bb5 139 PANTHER PTHR10093 3 88 1.2E-29 T 20-04-2016 APRE_RS08375 6d14a9d179650268a5640eb1ee811bb5 139 PANTHER PTHR10093 104 139 1.2E-29 T 20-04-2016 APRE_RS08375 6d14a9d179650268a5640eb1ee811bb5 139 Pfam PF01592 NifU-like N terminal domain 7 126 4.9E-18 T 20-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APRE_RS08375 6d14a9d179650268a5640eb1ee811bb5 139 SUPERFAMILY SSF82649 1 139 1.47E-44 T 20-04-2016 APRE_RS08375 6d14a9d179650268a5640eb1ee811bb5 139 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 139 9.7E-52 T 20-04-2016 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 SUPERFAMILY SSF110324 12 92 1.05E-31 T 20-04-2016 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 PRINTS PR00063 Ribosomal protein L27 signature 13 37 3.2E-36 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 PRINTS PR00063 Ribosomal protein L27 signature 63 87 3.2E-36 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 PRINTS PR00063 Ribosomal protein L27 signature 38 62 3.2E-36 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 20-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 11 90 2.2E-36 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 78 1.0E-11 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 26.016 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 Gene3D G3DSA:2.40.50.100 29 92 6.9E-32 T 20-04-2016 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 PANTHER PTHR15893 2 94 1.4E-41 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04745 875b8334b83aa180186e4fc864c1a710 97 Pfam PF01016 Ribosomal L27 protein 12 90 2.5E-34 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02825 187368bad2b1ba33ebf458eab9465104 184 PANTHER PTHR13256 2 146 7.7E-22 T 20-04-2016 APRE_RS02825 187368bad2b1ba33ebf458eab9465104 184 Pfam PF13302 Acetyltransferase (GNAT) domain 19 139 2.7E-15 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS02825 187368bad2b1ba33ebf458eab9465104 184 PANTHER PTHR13256:SF39 2 146 7.7E-22 T 20-04-2016 APRE_RS02825 187368bad2b1ba33ebf458eab9465104 184 Gene3D G3DSA:3.40.630.30 2 152 7.2E-26 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS02825 187368bad2b1ba33ebf458eab9465104 184 SUPERFAMILY SSF55729 2 148 4.06E-24 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01030 e6446f4315354bcdd4e67865719a40fe 312 PANTHER PTHR32502 1 312 3.8E-142 T 20-04-2016 APRE_RS01030 e6446f4315354bcdd4e67865719a40fe 312 PANTHER PTHR32502:SF5 1 312 3.8E-142 T 20-04-2016 APRE_RS01030 e6446f4315354bcdd4e67865719a40fe 312 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 14 312 4.7E-111 T 20-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 3.4E-92 T 20-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 Pfam PF00923 Transaldolase 3 211 1.1E-57 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 20-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 Gene3D G3DSA:3.20.20.70 1 213 1.5E-71 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 PANTHER PTHR10683 1 215 9.3E-83 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 SUPERFAMILY SSF51569 1 213 1.47E-78 T 20-04-2016 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 Hamap MF_00494 Probable transaldolase [tal]. 1 214 45.267 T 20-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APRE_RS08280 02d0c769218459bc334e72e04cecb614 215 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 20-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 SUPERFAMILY SSF52402 5 244 2.65E-60 T 20-04-2016 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 356 39.786 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 Gene3D G3DSA:2.40.30.10 278 363 1.3E-25 T 20-04-2016 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 PANTHER PTHR11933 3 361 5.1E-194 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 Gene3D G3DSA:2.30.30.280 213 276 3.0E-29 T 20-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 PANTHER PTHR11933:SF10 3 361 5.1E-194 T 20-04-2016 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 355 2.3E-138 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 Gene3D G3DSA:3.40.50.620 3 211 5.3E-99 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS02985 94d6458f39aee675d39b77eb5e808b29 372 Pfam PF03054 tRNA methyl transferase 8 355 6.0E-142 T 20-04-2016 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 SUPERFAMILY SSF52374 1 276 1.02E-103 T 20-04-2016 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 Gene3D G3DSA:3.40.50.620 1 173 1.0E-76 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 Gene3D G3DSA:3.30.1300.10 174 277 7.0E-32 T 20-04-2016 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 PANTHER PTHR21299 1 278 4.0E-135 T 20-04-2016 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 276 1.1E-105 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 PANTHER PTHR21299:SF1 1 278 4.0E-135 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 Pfam PF02569 Pantoate-beta-alanine ligase 2 275 1.2E-105 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APRE_RS00600 894a32ed4cc1622ebf08853b9b075e7a 279 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 39.12 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APRE_RS05820 505386e9821e9722b92e72fc16a21457 280 Pfam PF04228 Putative neutral zinc metallopeptidase 3 271 4.3E-96 T 20-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative APRE_RS05820 505386e9821e9722b92e72fc16a21457 280 PANTHER PTHR30168 2 279 3.5E-104 T 20-04-2016 APRE_RS05820 505386e9821e9722b92e72fc16a21457 280 Gene3D G3DSA:3.40.390.10 82 162 9.6E-5 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APRE_RS01710 ed9cb635d8a707591e1c62d44b51f1fd 212 Pfam PF14353 CpXC protein 10 135 5.1E-26 T 20-04-2016 IPR025682 CpXC domain APRE_RS00930 e1e38873dc04a537061af40919b53d30 148 PANTHER PTHR33540 1 133 2.3E-33 T 20-04-2016 APRE_RS00930 e1e38873dc04a537061af40919b53d30 148 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 4 132 2.5E-31 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APRE_RS00930 e1e38873dc04a537061af40919b53d30 148 Gene3D G3DSA:3.40.50.300 3 142 1.3E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00930 e1e38873dc04a537061af40919b53d30 148 SUPERFAMILY SSF52540 20 117 2.67E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00930 e1e38873dc04a537061af40919b53d30 148 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 128 5.1E-34 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 Pfam PF00654 Voltage gated chloride channel 70 411 1.5E-74 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PANTHER PTHR11689 1 424 7.0E-65 T 20-04-2016 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 Gene3D G3DSA:1.10.3080.10 5 425 6.6E-76 T 20-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PANTHER PTHR11689:SF96 1 424 7.0E-65 T 20-04-2016 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 SUPERFAMILY SSF81340 6 426 8.24E-86 T 20-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PRINTS PR00762 Chloride channel signature 82 99 2.6E-19 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PRINTS PR00762 Chloride channel signature 325 345 2.6E-19 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PRINTS PR00762 Chloride channel signature 378 397 2.6E-19 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PRINTS PR00762 Chloride channel signature 360 376 2.6E-19 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APRE_RS02385 6481224ddf26829536605c8e40e3790e 428 PRINTS PR00762 Chloride channel signature 161 180 2.6E-19 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APRE_RS07640 e30ff552683e14c6f60f08ad156f403c 118 Pfam PF07892 Protein of unknown function (DUF1667) 35 115 9.3E-31 T 20-04-2016 IPR012460 Protein of unknown function DUF1667 APRE_RS07640 e30ff552683e14c6f60f08ad156f403c 118 SUPERFAMILY SSF160148 47 117 1.57E-22 T 20-04-2016 IPR012460 Protein of unknown function DUF1667 APRE_RS07640 e30ff552683e14c6f60f08ad156f403c 118 PANTHER PTHR39450 2 117 3.1E-36 T 20-04-2016 APRE_RS07640 e30ff552683e14c6f60f08ad156f403c 118 Gene3D G3DSA:3.10.530.10 47 115 5.1E-26 T 20-04-2016 IPR012460 Protein of unknown function DUF1667 APRE_RS07640 e30ff552683e14c6f60f08ad156f403c 118 SUPERFAMILY SSF53706 5 59 7.38E-5 T 20-04-2016 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 SUPERFAMILY SSF101904 497 812 1.83E-97 T 20-04-2016 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 PANTHER PTHR10169:SF48 1 778 0.0 T 20-04-2016 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 470 2.4E-160 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 PANTHER PTHR10169 1 778 0.0 T 20-04-2016 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 SUPERFAMILY SSF56719 29 486 2.62E-178 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 7 804 0.0 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 811 28.792 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 SMART SM00434 10 463 1.5E-275 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Gene3D G3DSA:3.30.1360.40 235 330 2.2E-40 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Gene3D G3DSA:3.90.199.10 29 234 8.2E-121 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Gene3D G3DSA:3.90.199.10 332 397 8.2E-121 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 652 1.8E-4 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 753 7.6E-9 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 502 546 7.1E-11 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 801 1.7E-7 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 700 7.8E-13 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 601 2.5E-9 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APRE_RS00030 c890362bbd3cf5e6606903d71cf571f5 814 Gene3D G3DSA:2.120.10.90 495 803 3.8E-111 T 20-04-2016 APRE_RS00330 664082d5abc0bc5441fa6438684f4156 293 Pfam PF04055 Radical SAM superfamily 21 181 2.6E-16 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS00330 664082d5abc0bc5441fa6438684f4156 293 PANTHER PTHR11918:SF47 8 224 7.0E-33 T 20-04-2016 APRE_RS00330 664082d5abc0bc5441fa6438684f4156 293 SUPERFAMILY SSF102114 15 239 5.36E-27 T 20-04-2016 APRE_RS00330 664082d5abc0bc5441fa6438684f4156 293 Gene3D G3DSA:3.80.30.20 20 231 4.2E-23 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS00330 664082d5abc0bc5441fa6438684f4156 293 PANTHER PTHR11918 8 224 7.0E-33 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APRE_RS00330 664082d5abc0bc5441fa6438684f4156 293 SMART SM00729 16 231 2.1E-17 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS03305 fb135b6ed5cc65e3f6d80c483264f585 301 SMART SM00046 3 129 0.0011 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APRE_RS03305 fb135b6ed5cc65e3f6d80c483264f585 301 PANTHER PTHR12358 37 294 6.0E-36 T 20-04-2016 APRE_RS03305 fb135b6ed5cc65e3f6d80c483264f585 301 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 122 2.3E-17 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APRE_RS03305 fb135b6ed5cc65e3f6d80c483264f585 301 SUPERFAMILY SSF111331 1 298 2.83E-54 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APRE_RS03305 fb135b6ed5cc65e3f6d80c483264f585 301 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 295 2.5E-37 T 20-04-2016 IPR005218 Diacylglycerol/lipid kinase APRE_RS00535 4a33760bf1828b367551627dd068bf7a 186 Pfam PF02417 Chromate transporter 3 182 2.6E-36 T 20-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 APRE_RS00535 4a33760bf1828b367551627dd068bf7a 186 PANTHER PTHR33567 1 184 5.1E-29 T 20-04-2016 APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 SMART SM00930 260 335 8.1E-21 T 20-04-2016 IPR018449 NIL domain APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 SUPERFAMILY SSF52540 1 236 9.35E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 PANTHER PTHR24220:SF549 3 334 8.0E-130 T 20-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 Pfam PF00005 ABC transporter 18 165 2.7E-34 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 PANTHER PTHR24220 3 334 8.0E-130 T 20-04-2016 APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 Gene3D G3DSA:3.30.70.260 233 336 1.4E-25 T 20-04-2016 APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 SUPERFAMILY SSF55021 248 336 4.92E-20 T 20-04-2016 APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 SMART SM00382 26 236 2.6E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 Gene3D G3DSA:3.40.50.300 1 232 9.6E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01505 75811d87de32e7ae69230518ce4f9026 342 Pfam PF09383 NIL domain 263 332 1.2E-19 T 20-04-2016 IPR018449 NIL domain APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 PANTHER PTHR34383:SF3 1 306 4.2E-119 T 20-04-2016 APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 SUPERFAMILY SSF52540 124 311 3.52E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 PANTHER PTHR34383 1 306 4.2E-119 T 20-04-2016 APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 94 315 1.5E-77 T 20-04-2016 IPR022488 Polyphosphate kinase-2-related APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 1 58 7.9E-7 T 20-04-2016 IPR022488 Polyphosphate kinase-2-related APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 Gene3D G3DSA:3.40.50.300 77 318 5.6E-91 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08080 a155ea8463092feebb488a2255e818c0 325 Gene3D G3DSA:3.40.50.300 1 76 3.2E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02880 1a7ca126453d6213ffbd1821f0d97539 198 SUPERFAMILY SSF46689 9 65 8.21E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS02880 1a7ca126453d6213ffbd1821f0d97539 198 PANTHER PTHR30055 10 104 1.7E-16 T 20-04-2016 APRE_RS02880 1a7ca126453d6213ffbd1821f0d97539 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.8E-5 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS02880 1a7ca126453d6213ffbd1821f0d97539 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.8E-5 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS02880 1a7ca126453d6213ffbd1821f0d97539 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.4E-11 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS02880 1a7ca126453d6213ffbd1821f0d97539 198 Gene3D G3DSA:1.10.357.10 9 149 4.7E-22 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 183 364 4.5E-64 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 Gene3D G3DSA:3.40.50.10300 184 389 1.1E-73 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 388 1.7E-134 T 20-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 Pfam PF02441 Flavoprotein 5 132 9.7E-36 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 SUPERFAMILY SSF102645 181 389 1.57E-68 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 Gene3D G3DSA:3.40.50.1950 2 183 6.2E-66 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 PANTHER PTHR14359:SF20 1 390 5.3E-161 T 20-04-2016 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 SUPERFAMILY SSF52507 1 178 2.35E-56 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APRE_RS04905 3bef724d08972e74e2e6216c84d9f40d 390 PANTHER PTHR14359 1 390 5.3E-161 T 20-04-2016 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 Pfam PF07702 UTRA domain 87 224 4.9E-32 T 20-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 SUPERFAMILY SSF46785 1 68 1.32E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 SUPERFAMILY SSF64288 52 229 1.43E-42 T 20-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 Gene3D G3DSA:3.40.1410.10 61 229 2.9E-46 T 20-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 SMART SM00345 7 64 2.5E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 SMART SM00866 86 225 3.3E-31 T 20-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 PANTHER PTHR11751 1 67 1.0E-21 T 20-04-2016 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 PANTHER PTHR11751 115 138 1.0E-21 T 20-04-2016 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 64 1.6E-14 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 Gene3D G3DSA:1.10.10.10 2 60 9.4E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 1.7E-8 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 1.7E-8 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 PANTHER PTHR11751:SF333 1 67 1.0E-21 T 20-04-2016 APRE_RS00400 cd875b7c76f7c3d93939ad21d2f70b02 233 PANTHER PTHR11751:SF333 115 138 1.0E-21 T 20-04-2016 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 PANTHER PTHR11271:SF7 1 419 1.0E-135 T 20-04-2016 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 Pfam PF01979 Amidohydrolase family 53 392 3.1E-72 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 PANTHER PTHR11271 1 419 1.0E-135 T 20-04-2016 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 SUPERFAMILY SSF51556 54 341 2.01E-91 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 SUPERFAMILY SSF51338 1 54 7.39E-28 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 SUPERFAMILY SSF51338 343 417 7.39E-28 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 Gene3D G3DSA:3.20.20.140 70 332 1.4E-90 T 20-04-2016 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 Gene3D G3DSA:2.30.40.10 333 402 2.5E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 Gene3D G3DSA:2.30.40.10 1 69 3.1E-15 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS04990 191770e7cf247e7ceb6ba7c46700ef04 420 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 418 40.289 T 20-04-2016 IPR023512 Deaminase MtaD/DadD GO:0019239 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 PANTHER PTHR32125:SF1 4 226 2.9E-88 T 20-04-2016 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 Gene3D G3DSA:1.10.1270.20 159 231 4.8E-24 T 20-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 4 229 2.2E-86 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 238 84.82 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 Gene3D G3DSA:3.40.1280.10 3 158 2.1E-59 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 219 1.2E-58 T 20-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 PIRSF PIRSF000386 2 238 1.8E-91 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 PANTHER PTHR32125 4 226 2.9E-88 T 20-04-2016 APRE_RS06590 c3ea64cb5163f07d2240d5b62e48ce76 238 SUPERFAMILY SSF75217 4 231 1.47E-84 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 2 212 33.147 T 20-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 SUPERFAMILY SSF51569 2 211 4.5E-79 T 20-04-2016 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 PIRSF PIRSF001357 1 212 2.5E-73 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 PANTHER PTHR10889 1 212 4.1E-99 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 Gene3D G3DSA:3.20.20.70 2 212 4.7E-87 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 Pfam PF01791 DeoC/LacD family aldolase 12 204 3.2E-22 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 209 1.0E-79 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS07890 c66353775bba818bd2ba5282e1745a76 212 SMART SM01133 3 212 5.0E-87 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 Gene3D G3DSA:3.40.50.1980 245 364 5.3E-27 T 20-04-2016 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 Gene3D G3DSA:3.40.50.1980 60 244 5.1E-47 T 20-04-2016 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 PANTHER PTHR30477:SF1 182 336 4.7E-61 T 20-04-2016 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 PANTHER PTHR30477:SF1 56 152 4.7E-61 T 20-04-2016 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 Pfam PF01297 Zinc-uptake complex component A periplasmic 68 361 1.6E-66 T 20-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 PANTHER PTHR30477 182 336 4.7E-61 T 20-04-2016 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 PANTHER PTHR30477 56 152 4.7E-61 T 20-04-2016 APRE_RS02725 9dbd5751a13b80c9b8dd4f560282c39e 365 SUPERFAMILY SSF53807 68 364 2.5E-75 T 20-04-2016 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 SUPERFAMILY SSF82051 2 156 2.88E-51 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 Gene3D G3DSA:3.40.50.300 158 334 2.9E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 360 425 2.5E-18 T 20-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 Pfam PF01018 GTP1/OBG 2 156 2.2E-57 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 181 199 1.1E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 226 244 1.1E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 160 180 1.1E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 209 224 1.1E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 SUPERFAMILY SSF52540 159 329 2.88E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 Pfam PF09269 Domain of unknown function (DUF1967) 360 424 4.0E-19 T 20-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PANTHER PTHR11702 2 365 2.3E-148 T 20-04-2016 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 159 322 1.5E-13 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PIRSF PIRSF002401 1 374 7.0E-140 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 Gene3D G3DSA:2.70.210.12 2 154 8.0E-53 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 ProSitePatterns PS00905 GTP1/OBG family signature. 211 224 - T 20-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 Pfam PF01926 50S ribosome-binding GTPase 159 282 8.6E-27 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 Hamap MF_01454 GTPase Obg [obg]. 1 327 46.114 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 SUPERFAMILY SSF102741 359 426 9.02E-16 T 20-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 PANTHER PTHR11702:SF3 2 365 2.3E-148 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APRE_RS04750 10e66843fd5fd7388b41ada9d458219a 426 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 326 9.5E-139 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 PANTHER PTHR24220:SF453 6 222 1.7E-86 T 20-04-2016 APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 Gene3D G3DSA:3.40.50.300 2 220 4.2E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 PANTHER PTHR24220 6 222 1.7E-86 T 20-04-2016 APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 SMART SM00382 29 209 5.8E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 SUPERFAMILY SSF52540 4 221 9.01E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03355 549ae8eaf016847ef488a84e3762ae92 297 Pfam PF00005 ABC transporter 23 161 5.0E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 PANTHER PTHR12039 1 197 8.8E-45 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 Pfam PF01467 Cytidylyltransferase-like 5 171 6.2E-27 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 2.9E-12 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 198 25.943 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 Gene3D G3DSA:3.40.50.620 1 197 4.5E-55 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 197 3.6E-51 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APRE_RS04760 2daf649caaf626dd0c4d0bd768719933 198 SUPERFAMILY SSF52374 2 198 1.19E-49 T 20-04-2016 APRE_RS02165 19705d86735b3811671fa939f741683f 78 Gene3D G3DSA:2.30.30.100 2 76 2.3E-26 T 20-04-2016 APRE_RS02165 19705d86735b3811671fa939f741683f 78 Pfam PF06257 Biofilm formation stimulator VEG 5 75 6.1E-26 T 20-04-2016 IPR009366 Protein Veg GO:0042710 APRE_RS02165 19705d86735b3811671fa939f741683f 78 PANTHER PTHR40026:SF1 1 75 5.1E-15 T 20-04-2016 IPR009366 Protein Veg GO:0042710 APRE_RS02165 19705d86735b3811671fa939f741683f 78 PANTHER PTHR40026 1 75 5.1E-15 T 20-04-2016 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 SUPERFAMILY SSF52374 19 185 3.38E-24 T 20-04-2016 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 Gene3D G3DSA:3.40.50.620 14 181 6.0E-51 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 PANTHER PTHR22749 1 317 2.8E-95 T 20-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 Pfam PF06574 FAD synthetase 16 168 1.2E-41 T 20-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 PIRSF PIRSF004491 5 316 1.6E-98 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 SUPERFAMILY SSF82114 176 310 4.14E-43 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 Gene3D G3DSA:2.40.30.30 182 310 1.6E-41 T 20-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 23 309 4.0E-79 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 SMART SM00904 185 309 2.8E-51 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 PANTHER PTHR22749:SF0 1 317 2.8E-95 T 20-04-2016 APRE_RS03215 31fe155016d49e6d4f260bf5e9e347e0 319 Pfam PF01687 Riboflavin kinase 186 308 1.1E-35 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APRE_RS08775 fe4f94b55d6241afacd0523804e65cf0 147 Gene3D G3DSA:3.40.630.30 3 144 8.1E-35 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS08775 fe4f94b55d6241afacd0523804e65cf0 147 Pfam PF13673 Acetyltransferase (GNAT) domain 54 144 9.5E-16 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS08775 fe4f94b55d6241afacd0523804e65cf0 147 PANTHER PTHR23091:SF275 6 144 2.2E-24 T 20-04-2016 APRE_RS08775 fe4f94b55d6241afacd0523804e65cf0 147 SUPERFAMILY SSF55729 7 146 4.15E-24 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS08775 fe4f94b55d6241afacd0523804e65cf0 147 PANTHER PTHR23091 6 144 2.2E-24 T 20-04-2016 APRE_RS05260 0cc906a3e9bd0a0255ad08b246647197 62 SUPERFAMILY SSF116842 4 61 8.11E-13 T 20-04-2016 APRE_RS05260 0cc906a3e9bd0a0255ad08b246647197 62 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 59 3.8E-13 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APRE_RS05260 0cc906a3e9bd0a0255ad08b246647197 62 Gene3D G3DSA:1.10.287.1040 4 61 7.3E-12 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APRE_RS05260 0cc906a3e9bd0a0255ad08b246647197 62 Pfam PF02609 Exonuclease VII small subunit 7 56 7.8E-12 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PRINTS PR00132 Glycosyl hydrolase family 2 signature 406 421 5.9E-6 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PRINTS PR00132 Glycosyl hydrolase family 2 signature 288 302 5.9E-6 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PRINTS PR00132 Glycosyl hydrolase family 2 signature 319 337 5.9E-6 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Pfam PF00703 Glycosyl hydrolases family 2 177 276 6.4E-12 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 SUPERFAMILY SSF51445 281 618 1.17E-52 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Gene3D G3DSA:2.60.40.1560 624 724 1.9E-7 T 20-04-2016 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Gene3D G3DSA:2.60.40.320 154 275 5.3E-20 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 19 160 4.0E-15 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 285 477 2.3E-16 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Pfam PF16355 Domain of unknown function (DUF4982) 639 719 7.6E-12 T 20-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Gene3D G3DSA:3.20.20.80 276 618 8.2E-61 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 SUPERFAMILY SSF49303 177 276 1.21E-9 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 SUPERFAMILY SSF49785 14 163 3.64E-39 T 20-04-2016 IPR008979 Galactose-binding domain-like APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PANTHER PTHR10066 7 365 6.2E-123 T 20-04-2016 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PANTHER PTHR10066 388 514 6.2E-123 T 20-04-2016 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PANTHER PTHR10066 538 682 6.2E-123 T 20-04-2016 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 Gene3D G3DSA:2.60.120.260 11 153 1.6E-36 T 20-04-2016 IPR008979 Galactose-binding domain-like APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PANTHER PTHR10066:SF71 7 365 6.2E-123 T 20-04-2016 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PANTHER PTHR10066:SF71 388 514 6.2E-123 T 20-04-2016 APRE_RS08235 0019ddf3228410ed077950fc1c684726 1093 PANTHER PTHR10066:SF71 538 682 6.2E-123 T 20-04-2016 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 PANTHER PTHR24423 7 23 2.4E-69 T 20-04-2016 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 PANTHER PTHR24423 205 490 2.4E-69 T 20-04-2016 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 330 7.0E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SMART SM00388 264 332 9.9E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SUPERFAMILY SSF158472 213 260 2.35E-8 T 20-04-2016 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SUPERFAMILY SSF47384 247 332 9.22E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 Gene3D G3DSA:3.30.565.10 318 489 1.5E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 484 1.0E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 Gene3D G3DSA:1.10.287.130 257 317 5.2E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SMART SM00304 211 263 6.2E-9 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SMART SM00387 378 486 2.1E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SUPERFAMILY SSF103190 84 181 3.06E-6 T 20-04-2016 IPR029151 Periplasmic sensor domain-like APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 Gene3D G3DSA:3.30.450.20 54 182 5.8E-8 T 20-04-2016 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 SUPERFAMILY SSF55874 321 486 7.73E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 3.9E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS04585 52733a470ceceea4e5671e73210c1b28 491 Pfam PF00672 HAMP domain 192 258 2.0E-13 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 122 8.3E-16 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 Gene3D G3DSA:3.10.180.10 1 125 3.5E-36 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 20-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 PANTHER PTHR10374:SF8 1 126 6.5E-42 T 20-04-2016 APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 SUPERFAMILY SSF54593 1 125 5.1E-29 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 20-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APRE_RS01975 241355a5da79a1d2b90bae1fab01145d 126 PANTHER PTHR10374 1 126 6.5E-42 T 20-04-2016 APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 Gene3D G3DSA:1.10.8.100 213 278 3.2E-19 T 20-04-2016 IPR023165 rRNA adenine dimethylase-like APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 77 - T 20-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 Pfam PF00398 Ribosomal RNA adenine dimethylase 19 277 5.8E-66 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 PANTHER PTHR11727 10 278 1.4E-80 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 Gene3D G3DSA:3.40.50.150 6 209 6.9E-67 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 SMART SM00650 35 209 1.6E-74 T 20-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 276 5.7E-82 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 SUPERFAMILY SSF53335 19 278 4.89E-71 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS07745 982bc309fe0627f16226203a8f18f3e5 280 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 278 51.944 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 291 2.0E-111 T 20-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 183 200 - T 20-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 SUPERFAMILY SSF53697 6 246 2.02E-67 T 20-04-2016 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 Gene3D G3DSA:3.40.50.10490 6 247 1.3E-82 T 20-04-2016 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 293 38.683 T 20-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 PANTHER PTHR10088 6 290 4.2E-126 T 20-04-2016 APRE_RS07905 1eacadd0ab885eac4a31b429009d3429 293 Pfam PF01380 SIS domain 111 205 4.9E-9 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 Gene3D G3DSA:2.60.120.560 322 443 5.3E-18 T 20-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 SMART SM00640 31 431 4.3E-92 T 20-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 PANTHER PTHR30175 29 440 1.5E-75 T 20-04-2016 APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 Gene3D G3DSA:2.115.10.20 39 321 1.2E-25 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 SUPERFAMILY SSF49899 338 443 1.27E-12 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 16 441 6.3E-126 T 20-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 20-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 338 1.9E-86 T 20-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 PANTHER PTHR30175:SF8 29 440 1.5E-75 T 20-04-2016 APRE_RS04105 d539d1656c2e43c7e15b2d4a98cb923f 464 SUPERFAMILY SSF75005 23 339 1.0E-89 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 Gene3D G3DSA:1.10.10.10 5 77 4.5E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 PANTHER PTHR11751:SF362 19 103 1.1E-17 T 20-04-2016 APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 PANTHER PTHR11751 19 103 1.1E-17 T 20-04-2016 APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 SUPERFAMILY SSF48008 86 213 1.49E-15 T 20-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 Pfam PF07729 FCD domain 86 209 8.9E-13 T 20-04-2016 IPR011711 GntR, C-terminal APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 Gene3D G3DSA:1.20.120.530 84 216 8.5E-18 T 20-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 76 2.9E-10 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 SUPERFAMILY SSF46785 9 85 1.86E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08270 8e9221a5fce3482b0b67398e039677c1 230 SMART SM00345 18 76 1.2E-9 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 Gene3D G3DSA:3.20.140.10 2 386 1.5E-125 T 20-04-2016 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 PIRSF PIRSF000484 1 480 3.2E-154 T 20-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 PANTHER PTHR11098:SF13 1 480 1.1E-210 T 20-04-2016 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 155 343 8.3E-8 T 20-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 SUPERFAMILY SSF54675 4 136 8.63E-45 T 20-04-2016 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 PANTHER PTHR11098 1 480 1.1E-210 T 20-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 SUPERFAMILY SSF51690 138 477 7.36E-122 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APRE_RS00790 c2345d25247486c5eef6754df04d6fe5 480 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 9 465 4.4E-170 T 20-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 SMART SM00354 1 72 6.2E-29 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-5 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-5 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 Gene3D G3DSA:1.10.260.40 2 54 8.0E-24 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 Pfam PF13377 Periplasmic binding protein-like domain 169 326 4.4E-25 T 20-04-2016 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 Gene3D G3DSA:3.40.50.2300 55 172 9.9E-26 T 20-04-2016 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 SUPERFAMILY SSF53822 63 327 1.13E-52 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 PANTHER PTHR30146 1 326 1.6E-86 T 20-04-2016 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 SUPERFAMILY SSF47413 1 61 6.47E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 Gene3D G3DSA:3.40.50.2300 173 308 9.3E-37 T 20-04-2016 APRE_RS08310 2b33c05260475435e5beefb3303fcd9e 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.8E-17 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 Pfam PF07971 Glycosyl hydrolase family 92 193 693 7.2E-114 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 PANTHER PTHR12143:SF22 1 697 5.3E-106 T 20-04-2016 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 SUPERFAMILY SSF48208 221 260 1.28E-13 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 SUPERFAMILY SSF48208 288 623 1.28E-13 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 Gene3D G3DSA:1.20.1610.10 405 558 3.3E-54 T 20-04-2016 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 Gene3D G3DSA:1.20.1050.60 309 397 3.4E-20 T 20-04-2016 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 Gene3D G3DSA:2.70.98.10 189 281 1.4E-12 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 Gene3D G3DSA:2.70.98.10 11 103 1.2E-16 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 Gene3D G3DSA:3.30.2080.10 559 695 3.5E-44 T 20-04-2016 APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 191 694 1.7E-102 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APRE_RS08240 c358d48910e3a8c8b69d1d865cd3fcdb 701 PANTHER PTHR12143 1 697 5.3E-106 T 20-04-2016 APRE_RS08045 9ce8a3ac420be7d729f9175ce59918ea 115 Gene3D G3DSA:3.90.470.10 1 111 3.7E-40 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APRE_RS08045 9ce8a3ac420be7d729f9175ce59918ea 115 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 26.559 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APRE_RS08045 9ce8a3ac420be7d729f9175ce59918ea 115 SUPERFAMILY SSF54843 1 111 5.23E-41 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APRE_RS08045 9ce8a3ac420be7d729f9175ce59918ea 115 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 2.0E-35 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APRE_RS08045 9ce8a3ac420be7d729f9175ce59918ea 115 PANTHER PTHR13501 1 115 9.2E-41 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APRE_RS08045 9ce8a3ac420be7d729f9175ce59918ea 115 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 5.9E-32 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 ProSitePatterns PS01155 Endonuclease III family signature. 88 117 - T 20-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 Pfam PF00633 Helix-hairpin-helix motif 86 113 1.4E-10 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 TIGRFAM TIGR01083 nth: endonuclease III 2 180 1.2E-76 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 SUPERFAMILY SSF48150 7 193 9.26E-68 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 SMART SM00478 24 171 8.7E-56 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 PANTHER PTHR10359 10 194 4.2E-81 T 20-04-2016 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 Gene3D G3DSA:1.10.1670.10 109 194 9.1E-37 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APRE_RS03935 3f48e011858581af914880ee78e272f5 197 PIRSF PIRSF001435 5 197 7.9E-57 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 Hamap MF_00942 Endonuclease III [nth]. 1 195 35.976 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 20 154 8.0E-23 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APRE_RS03935 3f48e011858581af914880ee78e272f5 197 Gene3D G3DSA:1.10.340.30 10 108 8.4E-37 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 PANTHER PTHR32502 8 178 3.4E-118 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 PANTHER PTHR32502 227 377 3.4E-118 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 SUPERFAMILY SSF53697 16 366 6.25E-48 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 Gene3D G3DSA:3.40.50.10490 197 368 1.5E-48 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 PANTHER PTHR32502:SF3 8 178 3.4E-118 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 PANTHER PTHR32502:SF3 227 377 3.4E-118 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 Gene3D G3DSA:3.40.50.10490 7 193 7.9E-65 T 20-04-2016 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 Pfam PF01380 SIS domain 221 299 2.3E-7 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS00395 f3df119fa95a5302533a957eb89580d2 377 Pfam PF01380 SIS domain 52 179 9.7E-9 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 SUPERFAMILY SSF46946 3 112 3.01E-43 T 20-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 Gene3D G3DSA:1.10.8.50 1 71 1.3E-31 T 20-04-2016 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 113 24.538 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 PANTHER PTHR10871 1 113 9.1E-62 T 20-04-2016 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 PIRSF PIRSF002134 1 113 4.3E-41 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.2E-30 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 113 8.4E-51 T 20-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 20-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS07950 58fd77f89dec86a80b90d0d84104f23d 114 Gene3D G3DSA:4.10.910.10 72 111 4.4E-21 T 20-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 PANTHER PTHR24220 3 389 1.1E-114 T 20-04-2016 APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 Gene3D G3DSA:3.40.50.300 1 237 1.7E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 SMART SM00382 30 217 5.7E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 Pfam PF02687 FtsX-like permease family 776 896 5.5E-22 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 Pfam PF00005 ABC transporter 21 169 5.4E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 SUPERFAMILY SSF52540 1 237 1.0E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02530 dd642d14cc62247aeaeb63da3b69b720 903 PANTHER PTHR24220:SF539 3 389 1.1E-114 T 20-04-2016 APRE_RS07495 5537c4ab7a3bf14f426e20f54aa93a89 72 Pfam PF04023 FeoA domain 2 70 1.0E-10 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APRE_RS07495 5537c4ab7a3bf14f426e20f54aa93a89 72 SUPERFAMILY SSF50037 6 71 1.43E-10 T 20-04-2016 IPR008988 Transcriptional repressor, C-terminal APRE_RS07495 5537c4ab7a3bf14f426e20f54aa93a89 72 SMART SM00899 1 71 8.6E-10 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 327 337 - T 20-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 111 387 1.6E-59 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 Pfam PF01256 Carbohydrate kinase 134 381 1.0E-49 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 PANTHER PTHR12592 108 389 4.5E-72 T 20-04-2016 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 Gene3D G3DSA:3.90.470.20 2 101 7.6E-17 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 PANTHER PTHR12592:SF0 108 389 4.5E-72 T 20-04-2016 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 SUPERFAMILY SSF53613 112 387 2.57E-65 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 101 2.9E-11 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 Gene3D G3DSA:3.40.1190.20 111 387 2.1E-79 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 4 102 0.003 T 20-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 SUPERFAMILY SSF56214 2 101 3.92E-15 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APRE_RS04985 71ef59e6ec8598b484251e2674dd283b 390 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 110 387 21.925 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 Gene3D G3DSA:3.40.47.10 278 392 5.9E-71 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 Gene3D G3DSA:3.40.47.10 143 194 5.9E-71 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 PANTHER PTHR18919:SF95 1 393 1.9E-226 T 20-04-2016 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 Pfam PF02803 Thiolase, C-terminal domain 272 393 7.3E-51 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 PIRSF PIRSF000429 1 393 2.7E-137 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 Gene3D G3DSA:3.40.47.10 195 277 1.6E-81 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 Gene3D G3DSA:3.40.47.10 5 124 1.6E-81 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 20-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 5.7E-151 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 Pfam PF00108 Thiolase, N-terminal domain 5 264 2.2E-107 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 SUPERFAMILY SSF53901 5 271 1.8E-92 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 20-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 PANTHER PTHR18919 1 393 1.9E-226 T 20-04-2016 APRE_RS06925 7856b64ed204d6ba3cf76a754e7e4370 393 SUPERFAMILY SSF53901 272 393 4.46E-44 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 PANTHER PTHR21535 197 314 2.1E-19 T 20-04-2016 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 PANTHER PTHR21535 18 62 2.1E-19 T 20-04-2016 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 Pfam PF01544 CorA-like Mg2+ transporter protein 43 313 2.7E-47 T 20-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 Gene3D G3DSA:1.20.58.340 126 238 1.3E-5 T 20-04-2016 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 Gene3D G3DSA:1.20.58.340 242 313 1.2E-26 T 20-04-2016 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 SUPERFAMILY SSF144083 253 314 5.49E-21 T 20-04-2016 APRE_RS00545 9b0da448f9e770f466d4fdb30d0756bf 316 SUPERFAMILY SSF143865 5 249 2.22E-15 T 20-04-2016 APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 Pfam PF13558 Putative exonuclease SbcCD, C subunit 888 969 1.4E-11 T 20-04-2016 APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 Gene3D G3DSA:3.40.50.300 902 998 2.3E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 Pfam PF13476 AAA domain 5 251 2.0E-18 T 20-04-2016 APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 PANTHER PTHR32114 2 1011 4.5E-72 T 20-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 SUPERFAMILY SSF52540 1 189 8.0E-21 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 SUPERFAMILY SSF52540 903 998 8.0E-21 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 PANTHER PTHR32114:SF2 2 1011 4.5E-72 T 20-04-2016 APRE_RS02750 438164844c2259ef1ba4d0a16c32da25 1011 Gene3D G3DSA:3.40.50.300 1 163 1.9E-23 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 PANTHER PTHR11441 5 201 4.1E-62 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 Pfam PF00265 Thymidine kinase 6 182 1.0E-50 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 PIRSF PIRSF035805 2 196 2.3E-59 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 SUPERFAMILY SSF57716 143 193 2.23E-13 T 20-04-2016 APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 169 182 - T 20-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 Hamap MF_00124 Thymidine kinase [tdk]. 4 185 29.155 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 SUPERFAMILY SSF52540 5 142 3.86E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05345 38e2dcb008f29818d66b31fe9dd44268 201 Gene3D G3DSA:3.30.60.20 143 186 1.9E-17 T 20-04-2016 APRE_RS02790 c3f80bac5f207cf565e33862a5791853 401 Pfam PF02335 Cytochrome c552 31 391 9.6E-98 T 20-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APRE_RS02790 c3f80bac5f207cf565e33862a5791853 401 PANTHER PTHR30633 31 398 2.9E-64 T 20-04-2016 APRE_RS02790 c3f80bac5f207cf565e33862a5791853 401 Gene3D G3DSA:1.20.140.10 291 399 5.9E-27 T 20-04-2016 APRE_RS02790 c3f80bac5f207cf565e33862a5791853 401 PIRSF PIRSF000243 18 401 6.3E-93 T 20-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APRE_RS02790 c3f80bac5f207cf565e33862a5791853 401 SUPERFAMILY SSF48695 30 399 2.04E-109 T 20-04-2016 IPR011031 Multihaem cytochrome APRE_RS02790 c3f80bac5f207cf565e33862a5791853 401 Gene3D G3DSA:1.10.780.10 100 290 1.9E-16 T 20-04-2016 APRE_RS03410 a774309b2c83447b6a8cd3f5574d7552 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 24 1.6E-7 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03410 a774309b2c83447b6a8cd3f5574d7552 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03410 a774309b2c83447b6a8cd3f5574d7552 164 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 24 1.3E-7 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS07425 a637bdcda49802b8b3700ee7ab8fd814 238 Pfam PF05857 TraX protein 15 233 3.9E-46 T 20-04-2016 IPR008875 TraX APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 SUPERFAMILY SSF50447 3 83 4.94E-12 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 SUPERFAMILY SSF50346 91 160 1.14E-12 T 20-04-2016 IPR011033 PRC-barrel-like APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 Pfam PF05239 PRC-barrel domain 88 159 2.0E-7 T 20-04-2016 IPR027275 PRC-barrel domain APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 PANTHER PTHR33692 2 156 1.0E-30 T 20-04-2016 APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 Gene3D G3DSA:2.40.30.60 2 83 4.7E-12 T 20-04-2016 IPR002676 RimM protein GO:0006364 APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 Pfam PF01782 RimM N-terminal domain 5 82 1.1E-13 T 20-04-2016 IPR002676 RimM protein GO:0006364 APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 Gene3D G3DSA:2.30.30.240 91 161 3.6E-16 T 20-04-2016 APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 159 5.2E-36 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APRE_RS06595 343fd83611e95523e0be680a5d07744c 162 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 161 20.862 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 283 7.9E-141 T 20-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 SUPERFAMILY SSF51366 13 259 5.18E-65 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 PIRSF PIRSF029271 4 285 4.7E-142 T 20-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 PANTHER PTHR31829 12 285 2.7E-196 T 20-04-2016 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 1 285 46.511 T 20-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 Pfam PF01680 SOR/SNZ family 7 207 2.3E-103 T 20-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 Gene3D G3DSA:3.20.20.70 187 276 1.5E-48 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00245 a545c2bec59cf20dfc1abf0f7f64378f 285 Gene3D G3DSA:3.20.20.70 19 155 1.5E-48 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.142 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-48 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 PANTHER PTHR11761 1 122 2.9E-63 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.4E-53 T 20-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 SMART SM01374 1 122 1.4E-76 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 SUPERFAMILY SSF50193 1 122 1.3E-45 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 20-04-2016 IPR019972 Ribosomal protein L14P, conserved site APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.3E-49 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APRE_RS08020 61156783b18423c87f744ab355e6ccc2 122 PANTHER PTHR11761:SF3 1 122 2.9E-63 T 20-04-2016 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 SUPERFAMILY SSF81799 113 210 6.28E-33 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 PANTHER PTHR11265 1 306 2.6E-133 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 305 4.6E-116 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 Gene3D G3DSA:1.10.150.170 112 212 1.5E-36 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 306 37.919 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 PANTHER PTHR11265:SF0 1 306 2.6E-133 T 20-04-2016 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 Pfam PF01795 MraW methylase family 3 305 3.3E-119 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 PIRSF PIRSF004486 1 306 6.2E-112 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 Gene3D G3DSA:3.40.50.150 5 109 1.1E-51 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 Gene3D G3DSA:3.40.50.150 213 306 1.1E-51 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 SUPERFAMILY SSF53335 210 305 2.41E-44 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06140 7dd0535b0a564b8e0a1e364c15af617d 306 SUPERFAMILY SSF53335 5 112 2.41E-44 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 SUPERFAMILY SSF116726 240 329 1.7E-15 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 Gene3D G3DSA:3.30.70.1450 256 333 1.1E-23 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 Pfam PF02254 TrkA-N domain 110 224 1.3E-23 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 PANTHER PTHR16254 9 269 8.0E-69 T 20-04-2016 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 Pfam PF07885 Ion channel 13 85 3.6E-10 T 20-04-2016 IPR013099 Potassium channel domain APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 SUPERFAMILY SSF81324 6 130 1.31E-18 T 20-04-2016 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 PANTHER PTHR16254:SF21 9 269 8.0E-69 T 20-04-2016 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 Pfam PF02080 TrkA-C domain 260 328 8.0E-12 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 Gene3D G3DSA:3.40.50.720 107 248 1.0E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 Gene3D G3DSA:1.10.287.70 7 85 7.0E-13 T 20-04-2016 APRE_RS05705 c4223ac9c1b6c5dfb0033c60a1270918 335 SUPERFAMILY SSF51735 107 248 7.09E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02585 992637dcc711349ad31549889b9a373c 490 PANTHER PTHR30614 25 484 6.1E-100 T 20-04-2016 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 SMART SM00079 34 249 8.0E-4 T 20-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 325 485 1.3E-20 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 PANTHER PTHR30614:SF15 25 484 6.1E-100 T 20-04-2016 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 Gene3D G3DSA:3.40.190.10 32 110 2.0E-40 T 20-04-2016 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 Gene3D G3DSA:3.40.190.10 212 249 2.0E-40 T 20-04-2016 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 Gene3D G3DSA:1.10.3720.10 275 485 2.3E-44 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 SMART SM00062 34 251 1.3E-60 T 20-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APRE_RS02585 992637dcc711349ad31549889b9a373c 490 Gene3D G3DSA:3.40.190.10 111 211 2.9E-25 T 20-04-2016 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 SUPERFAMILY SSF53850 4 250 4.58E-66 T 20-04-2016 APRE_RS02585 992637dcc711349ad31549889b9a373c 490 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 249 8.0E-59 T 20-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APRE_RS02585 992637dcc711349ad31549889b9a373c 490 SUPERFAMILY SSF161098 275 476 2.88E-38 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 188 1.7E-44 T 20-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PRINTS PR00988 Uridine kinase signature 33 44 3.0E-33 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PRINTS PR00988 Uridine kinase signature 148 159 3.0E-33 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PRINTS PR00988 Uridine kinase signature 134 144 3.0E-33 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PRINTS PR00988 Uridine kinase signature 170 183 3.0E-33 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PRINTS PR00988 Uridine kinase signature 4 21 3.0E-33 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PRINTS PR00988 Uridine kinase signature 78 93 3.0E-33 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 PANTHER PTHR10285 6 205 2.4E-77 T 20-04-2016 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 Gene3D G3DSA:3.40.50.300 5 204 1.9E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 TIGRFAM TIGR00235 udk: uridine kinase 5 204 3.4E-76 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APRE_RS06495 ddcd2c173b9270d387ccdf9534307089 209 SUPERFAMILY SSF52540 5 196 1.66E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 205 3.3E-41 T 20-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 196 2.0E-22 T 20-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 194 9.5E-18 T 20-04-2016 APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 SUPERFAMILY SSF56784 2 210 1.89E-25 T 20-04-2016 IPR023214 HAD-like domain APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 PANTHER PTHR10000 6 236 1.0E-48 T 20-04-2016 APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 PANTHER PTHR10000:SF11 6 236 1.0E-48 T 20-04-2016 APRE_RS04610 84587054ba656fc4123b36869a21e08a 247 Gene3D G3DSA:3.40.50.1000 88 211 1.3E-27 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 2 648 0.0 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Gene3D G3DSA:3.40.50.300 417 580 7.4E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 SMART SM00490 458 544 2.3E-19 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 SUPERFAMILY SSF46600 604 651 1.7E-11 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 SMART SM00487 7 424 1.9E-27 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Gene3D G3DSA:4.10.860.10 600 651 2.7E-15 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Gene3D G3DSA:3.30.2060.10 157 236 9.3E-13 T 20-04-2016 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Pfam PF04851 Type III restriction enzyme, res subunit 9 136 4.3E-13 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 PANTHER PTHR24029 1 656 0.0 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 650 43.545 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 SUPERFAMILY SSF52540 4 413 6.45E-135 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Gene3D G3DSA:3.40.50.300 248 336 1.2E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Gene3D G3DSA:3.40.50.300 386 406 1.2E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Gene3D G3DSA:3.40.50.300 4 150 4.7E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Pfam PF12344 Ultra-violet resistance protein B 550 591 9.3E-24 T 20-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 SUPERFAMILY SSF52540 30 65 9.94E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 SUPERFAMILY SSF52540 455 584 9.94E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Pfam PF02151 UvrB/uvrC motif 617 648 2.2E-10 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS07230 5b5745beb524decc274fbebf46cb5926 656 Pfam PF00271 Helicase conserved C-terminal domain 432 543 8.6E-21 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 SUPERFAMILY SSF53850 138 247 2.71E-59 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 SUPERFAMILY SSF53850 343 527 2.71E-59 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 SUPERFAMILY SSF53850 560 715 2.71E-59 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 PANTHER PTHR30290 560 711 1.9E-44 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 PANTHER PTHR30290 353 538 1.9E-44 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 PANTHER PTHR30290 137 257 1.9E-44 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 Gene3D G3DSA:3.40.190.10 352 461 1.8E-14 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 PANTHER PTHR30290:SF9 560 711 1.9E-44 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 PANTHER PTHR30290:SF9 353 538 1.9E-44 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 PANTHER PTHR30290:SF9 137 257 1.9E-44 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 Gene3D G3DSA:3.90.76.10 137 246 1.0E-29 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 Gene3D G3DSA:3.10.105.10 560 693 4.0E-24 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 Gene3D G3DSA:3.10.105.10 462 527 4.0E-24 T 20-04-2016 APRE_RS00075 b46289dafa9c463025e4d83b3d808b69 728 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 137 642 2.5E-35 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 Gene3D G3DSA:3.30.310.40 21 63 1.1E-4 T 20-04-2016 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 SMART SM00478 132 294 4.3E-13 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 PANTHER PTHR10242 32 292 1.3E-55 T 20-04-2016 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 24 126 1.2E-15 T 20-04-2016 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 SUPERFAMILY SSF55945 20 121 3.14E-16 T 20-04-2016 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 Gene3D G3DSA:1.10.340.30 123 233 5.3E-37 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 SUPERFAMILY SSF48150 123 293 1.51E-39 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 PANTHER PTHR10242:SF2 32 292 1.3E-55 T 20-04-2016 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 Pfam PF00633 Helix-hairpin-helix motif 218 238 1.8E-5 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 128 278 1.2E-13 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APRE_RS07115 b1a0f624f63756230c97b8705523d594 300 Gene3D G3DSA:1.10.1670.10 234 291 2.6E-15 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 SUPERFAMILY SSF46906 68 141 3.4E-27 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 Gene3D G3DSA:3.30.1550.10 4 72 2.3E-33 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 7.6E-28 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 Gene3D G3DSA:1.10.10.250 73 141 4.4E-32 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-25 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 SMART SM00649 10 141 2.1E-78 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 37 74 4.0E-10 T 20-04-2016 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 SUPERFAMILY SSF54747 4 73 6.54E-27 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 142 30.263 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 PANTHER PTHR11661 3 142 3.9E-64 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APRE_RS05845 9363f5c59d757d6870ff026d6263558e 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 142 6.4E-59 T 20-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 PANTHER PTHR24221:SF271 370 619 7.1E-200 T 20-04-2016 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 PANTHER PTHR24221:SF271 19 344 7.1E-200 T 20-04-2016 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 SUPERFAMILY SSF52540 374 617 6.8E-83 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 PANTHER PTHR24221 370 619 7.1E-200 T 20-04-2016 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 PANTHER PTHR24221 19 344 7.1E-200 T 20-04-2016 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 Pfam PF00664 ABC transporter transmembrane region 34 304 1.8E-52 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 SMART SM00382 407 593 3.8E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 Gene3D G3DSA:3.40.50.300 381 611 4.3E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 Gene3D G3DSA:1.20.1560.10 22 334 9.2E-74 T 20-04-2016 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 SUPERFAMILY SSF90123 22 334 1.44E-76 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07015 9bf0fb006cdb218a07b35ea66b301f63 621 Pfam PF00005 ABC transporter 398 547 5.0E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02290 549440bd3741f5df272a74ae9f3ecb6b 130 PANTHER PTHR38445:SF2 1 116 1.1E-19 T 20-04-2016 APRE_RS02290 549440bd3741f5df272a74ae9f3ecb6b 130 SMART SM00345 16 75 3.6E-9 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS02290 549440bd3741f5df272a74ae9f3ecb6b 130 SUPERFAMILY SSF46785 5 76 1.47E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02290 549440bd3741f5df272a74ae9f3ecb6b 130 Gene3D G3DSA:1.10.10.10 2 76 1.3E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02290 549440bd3741f5df272a74ae9f3ecb6b 130 PANTHER PTHR38445 1 116 1.1E-19 T 20-04-2016 APRE_RS02290 549440bd3741f5df272a74ae9f3ecb6b 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.4E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 SUPERFAMILY SSF118215 27 417 1.57E-84 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 Pfam PF00375 Sodium:dicarboxylate symporter family 28 416 1.1E-95 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 Gene3D G3DSA:1.10.3860.10 19 422 1.4E-88 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 7.7E-12 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 7.7E-12 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PRINTS PR00173 Glutamate-aspartate symporter signature 91 116 7.7E-12 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 7.7E-12 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PRINTS PR00173 Glutamate-aspartate symporter signature 371 391 7.7E-12 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PANTHER PTHR11958:SF59 19 428 2.8E-79 T 20-04-2016 APRE_RS02540 713e0e204eac5999b5eca731d24d9fcf 428 PANTHER PTHR11958 19 428 2.8E-79 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS04055 602ff075a351a776d105644438973c10 299 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 20-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APRE_RS04055 602ff075a351a776d105644438973c10 299 PIRSF PIRSF000164 1 299 2.2E-74 T 20-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APRE_RS04055 602ff075a351a776d105644438973c10 299 PANTHER PTHR11938:SF5 5 297 1.4E-57 T 20-04-2016 APRE_RS04055 602ff075a351a776d105644438973c10 299 Pfam PF01180 Dihydroorotate dehydrogenase 4 284 1.4E-69 T 20-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APRE_RS04055 602ff075a351a776d105644438973c10 299 SUPERFAMILY SSF51395 2 298 6.23E-80 T 20-04-2016 APRE_RS04055 602ff075a351a776d105644438973c10 299 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 3 299 38.493 T 20-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 APRE_RS04055 602ff075a351a776d105644438973c10 299 PANTHER PTHR11938 5 297 1.4E-57 T 20-04-2016 APRE_RS04055 602ff075a351a776d105644438973c10 299 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 298 2.1E-108 T 20-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APRE_RS04055 602ff075a351a776d105644438973c10 299 Gene3D G3DSA:3.20.20.70 2 298 8.7E-90 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00925 e83d38f275384cb3cbcabb4a6808e9a5 198 PIRSF PIRSF037778 6 198 3.3E-46 T 20-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 APRE_RS00925 e83d38f275384cb3cbcabb4a6808e9a5 198 PANTHER PTHR38438:SF1 5 198 8.4E-44 T 20-04-2016 APRE_RS00925 e83d38f275384cb3cbcabb4a6808e9a5 198 PANTHER PTHR38438 5 198 8.4E-44 T 20-04-2016 APRE_RS00925 e83d38f275384cb3cbcabb4a6808e9a5 198 Pfam PF12822 Protein of unknown function (DUF3816) 11 188 7.1E-29 T 20-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 SUPERFAMILY SSF50331 237 362 2.31E-15 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 Gene3D G3DSA:2.40.50.100 240 291 1.6E-7 T 20-04-2016 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 Gene3D G3DSA:2.40.50.100 348 362 1.6E-7 T 20-04-2016 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 SMART SM00382 29 212 5.6E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 SUPERFAMILY SSF52540 4 243 2.41E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 PANTHER PTHR24220 5 313 4.1E-156 T 20-04-2016 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 Gene3D G3DSA:3.40.50.300 4 235 3.2E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 PANTHER PTHR24220:SF151 5 313 4.1E-156 T 20-04-2016 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 Pfam PF00005 ABC transporter 21 162 9.3E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS00320 57fad0bc8e45034cc9d1da111ba1808c 380 Gene3D G3DSA:2.40.50.140 296 346 5.4E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 Gene3D G3DSA:3.40.50.1700 465 499 2.1E-5 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 Gene3D G3DSA:3.40.50.1700 516 703 3.7E-13 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 479 705 3.5E-14 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 SUPERFAMILY SSF52279 479 659 1.57E-13 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 SUPERFAMILY SSF52279 686 705 1.57E-13 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 PANTHER PTHR30620 5 68 2.3E-59 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 PANTHER PTHR30620 114 329 2.3E-59 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 PANTHER PTHR30620 347 499 2.3E-59 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 PANTHER PTHR30620:SF5 5 68 2.3E-59 T 20-04-2016 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 PANTHER PTHR30620:SF5 114 329 2.3E-59 T 20-04-2016 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 PANTHER PTHR30620:SF5 347 499 2.3E-59 T 20-04-2016 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 SUPERFAMILY SSF51445 31 68 2.2E-60 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 SUPERFAMILY SSF51445 106 477 2.2E-60 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 120 438 3.1E-30 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 Gene3D G3DSA:3.20.20.300 32 66 6.3E-82 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APRE_RS08155 dfed6f6c355495db07bf86e84eeb2278 705 Gene3D G3DSA:3.20.20.300 100 459 6.3E-82 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APRE_RS07320 815a255bb3aefd7ac071628babfb3962 449 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 436 1.4E-97 T 20-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APRE_RS07320 815a255bb3aefd7ac071628babfb3962 449 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 354 374 - T 20-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APRE_RS07320 815a255bb3aefd7ac071628babfb3962 449 TIGRFAM TIGR03173 pbuX: xanthine permease 29 439 1.1E-128 T 20-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 APRE_RS07320 815a255bb3aefd7ac071628babfb3962 449 PANTHER PTHR11119 12 444 2.9E-77 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS07320 815a255bb3aefd7ac071628babfb3962 449 Pfam PF00860 Permease family 25 406 1.0E-83 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1241 1319 3.5E-6 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1477 1545 7.0E-7 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1320 1398 4.0E-22 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1094 1172 6.0E-20 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1399 1476 1.1E-12 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1548 1616 2.8E-13 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1173 1240 2.8E-5 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 1020 1093 3.6E-8 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 944 1019 4.7E-14 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 SMART SM01208 868 943 3.6E-15 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1325 1397 2.7E-16 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1402 1476 7.8E-12 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1173 1239 4.2E-6 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1550 1615 7.4E-11 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 949 1019 1.4E-12 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 873 940 3.4E-12 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1098 1171 1.6E-13 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1485 1544 9.4E-7 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1025 1090 3.4E-6 T 20-04-2016 IPR011098 G5 domain APRE_RS05700 0c34adc02338113addbfffc5df19a993 1859 Pfam PF07501 G5 domain 1243 1316 7.8E-6 T 20-04-2016 IPR011098 G5 domain APRE_RS00690 dffb73b9f39550bbb856c2b84c449f36 432 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 330 5.6E-32 T 20-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APRE_RS00690 dffb73b9f39550bbb856c2b84c449f36 432 PANTHER PTHR34378 10 406 6.5E-58 T 20-04-2016 APRE_RS00690 dffb73b9f39550bbb856c2b84c449f36 432 SUPERFAMILY SSF55931 18 258 9.81E-40 T 20-04-2016 APRE_RS00690 dffb73b9f39550bbb856c2b84c449f36 432 SUPERFAMILY SSF55931 289 401 9.81E-40 T 20-04-2016 APRE_RS00690 dffb73b9f39550bbb856c2b84c449f36 432 PANTHER PTHR34378:SF2 10 406 6.5E-58 T 20-04-2016 APRE_RS00690 dffb73b9f39550bbb856c2b84c449f36 432 PIRSF PIRSF017901 2 427 2.6E-92 T 20-04-2016 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Pfam PF00152 tRNA synthetases class II (D, K and N) 148 483 1.6E-85 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PRINTS PR00982 Lysyl-tRNA synthetase signature 368 384 1.6E-39 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PRINTS PR00982 Lysyl-tRNA synthetase signature 247 264 1.6E-39 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PRINTS PR00982 Lysyl-tRNA synthetase signature 184 194 1.6E-39 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PRINTS PR00982 Lysyl-tRNA synthetase signature 229 242 1.6E-39 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PRINTS PR00982 Lysyl-tRNA synthetase signature 200 216 1.6E-39 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 SUPERFAMILY SSF50249 6 140 1.23E-31 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PANTHER PTHR22594:SF4 1 497 7.2E-254 T 20-04-2016 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Gene3D G3DSA:3.30.930.10 142 482 7.2E-124 T 20-04-2016 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 485 3.7E-200 T 20-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 489 43.856 T 20-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 SUPERFAMILY SSF55681 147 484 5.74E-121 T 20-04-2016 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Gene3D G3DSA:2.40.50.140 520 630 1.0E-34 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Gene3D G3DSA:2.40.50.140 8 140 3.3E-35 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Pfam PF01336 OB-fold nucleic acid binding domain 55 124 1.8E-15 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 PANTHER PTHR22594 1 497 7.2E-254 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 Pfam PF01588 Putative tRNA binding domain 533 628 4.0E-21 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APRE_RS03290 3715bb65f1dcf256144231e4fcdb4123 631 SUPERFAMILY SSF50249 522 630 2.14E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 PANTHER PTHR32243 10 252 1.4E-107 T 20-04-2016 APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 PANTHER PTHR32243 270 307 1.4E-107 T 20-04-2016 APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 PANTHER PTHR32243:SF5 10 252 1.4E-107 T 20-04-2016 APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 PANTHER PTHR32243:SF5 270 307 1.4E-107 T 20-04-2016 APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 SUPERFAMILY SSF161098 19 306 1.8E-53 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 Gene3D G3DSA:1.10.3720.10 17 294 8.1E-46 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00740 63c2afeaf887c7889e27fc5aac1ccfea 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 2.5E-11 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 SUPERFAMILY SSF52374 2 317 1.61E-96 T 20-04-2016 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 Gene3D G3DSA:1.20.120.640 311 412 1.2E-22 T 20-04-2016 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 317 1.9E-124 T 20-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 472 38.533 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 2.5E-29 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 2.5E-29 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 2.5E-29 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 2.5E-29 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 470 8.3E-171 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 PANTHER PTHR10890 2 471 6.4E-214 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 SUPERFAMILY SSF47323 346 471 1.12E-33 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 Pfam PF09190 DALR domain 359 420 2.8E-15 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 SMART SM00840 359 422 5.5E-16 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APRE_RS08420 241f23f9c13bc011dcca163ad5c65348 472 Gene3D G3DSA:3.40.50.620 18 309 1.6E-103 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS02830 988fc694a55d21a4fc0943a2dda45775 253 SUPERFAMILY SSF158499 123 189 2.35E-10 T 20-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APRE_RS02830 988fc694a55d21a4fc0943a2dda45775 253 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 124 193 2.2E-11 T 20-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APRE_RS02830 988fc694a55d21a4fc0943a2dda45775 253 Gene3D G3DSA:1.10.10.630 122 193 3.2E-16 T 20-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APRE_RS02830 988fc694a55d21a4fc0943a2dda45775 253 Pfam PF07261 Replication initiation and membrane attachment 124 194 4.8E-13 T 20-04-2016 IPR006343 Replication protein, DnaD/DnaB domain APRE_RS01405 c28a4791fc3511873e0d08a47fc25feb 272 PANTHER PTHR32243:SF7 1 272 7.8E-94 T 20-04-2016 APRE_RS01405 c28a4791fc3511873e0d08a47fc25feb 272 SUPERFAMILY SSF161098 4 271 2.15E-59 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01405 c28a4791fc3511873e0d08a47fc25feb 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 258 6.7E-17 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01405 c28a4791fc3511873e0d08a47fc25feb 272 PANTHER PTHR32243 1 272 7.8E-94 T 20-04-2016 APRE_RS01405 c28a4791fc3511873e0d08a47fc25feb 272 Gene3D G3DSA:1.10.3720.10 3 258 7.6E-53 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 SUPERFAMILY SSF55347 133 252 7.68E-19 T 20-04-2016 APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 PANTHER PTHR22604 1 341 7.0E-60 T 20-04-2016 APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 SUPERFAMILY SSF51735 2 141 2.77E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 Gene3D G3DSA:3.40.50.720 1 135 7.2E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 111 2.5E-21 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 Gene3D G3DSA:3.30.360.10 136 334 6.3E-33 T 20-04-2016 APRE_RS08180 e0e3be0e9b010a4875d1c5c6d7956b0b 341 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 230 5.3E-6 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 PANTHER PTHR30345:SF4 1 176 4.7E-86 T 20-04-2016 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 2.3E-37 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 SUPERFAMILY SSF89623 1 151 6.54E-48 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 PANTHER PTHR30345 1 176 4.7E-86 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 PIRSF PIRSF005384 1 148 2.6E-49 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 Pfam PF02502 Ribose/Galactose Isomerase 3 141 8.5E-41 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS00370 81c5843e27afacf0a637a24dd3c808f4 176 Gene3D G3DSA:3.40.1400.10 1 155 3.1E-51 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PANTHER PTHR19375:SF117 3 324 9.9E-85 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 65 88 2.3E-35 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 2.3E-35 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 45 63 2.3E-35 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 2.3E-35 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 2.3E-35 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 SUPERFAMILY SSF53067 146 328 8.39E-34 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 Gene3D G3DSA:3.30.420.40 8 155 9.9E-32 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 Gene3D G3DSA:3.90.640.10 183 250 6.1E-19 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 PANTHER PTHR19375 3 324 9.9E-85 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 SUPERFAMILY SSF53067 9 142 3.97E-31 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 Pfam PF06723 MreB/Mbl protein 8 330 3.2E-104 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 Gene3D G3DSA:3.30.420.40 259 313 2.4E-18 T 20-04-2016 APRE_RS06685 e0b7c7c50b2b4696b2148f21c94cea7f 336 Gene3D G3DSA:3.30.420.40 156 182 2.4E-18 T 20-04-2016 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 PIRSF PIRSF001461 1 223 3.3E-81 T 20-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 Gene3D G3DSA:3.20.20.70 4 221 7.7E-82 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 210 3.5E-78 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 SUPERFAMILY SSF51366 2 214 6.12E-64 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 200 3.2E-71 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APRE_RS03490 7ffcbdd464522aa665428b37555d9303 225 PANTHER PTHR11749 1 211 3.8E-98 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 179 1.5E-34 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 1.3E-68 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 106.348 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 689 0.0 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Gene3D G3DSA:3.30.70.870 405 480 4.9E-36 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PRINTS PR00315 GTP-binding elongation factor signature 130 139 3.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.9E-15 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SUPERFAMILY SSF54980 404 481 3.53E-24 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PANTHER PTHR23115 8 177 0.0 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PANTHER PTHR23115 303 690 0.0 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PANTHER PTHR23115 254 282 0.0 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SUPERFAMILY SSF54980 603 688 1.87E-29 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PANTHER PTHR23115:SF66 8 177 0.0 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PANTHER PTHR23115:SF66 303 690 0.0 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 PANTHER PTHR23115:SF66 254 282 0.0 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Pfam PF14492 Elongation Factor G, domain II 404 477 1.4E-32 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SUPERFAMILY SSF52540 6 281 4.83E-106 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Pfam PF03764 Elongation factor G, domain IV 479 597 1.3E-42 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Gene3D G3DSA:3.40.50.300 7 286 2.3E-103 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SMART SM00838 600 687 8.4E-53 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Gene3D G3DSA:3.30.230.10 484 598 3.4E-46 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Pfam PF00679 Elongation factor G C-terminus 600 686 2.1E-30 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Gene3D G3DSA:3.30.70.240 599 685 8.3E-34 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Pfam PF03144 Elongation factor Tu domain 2 324 391 4.5E-16 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SMART SM00889 480 598 1.1E-61 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SUPERFAMILY SSF54211 479 599 7.59E-41 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 Gene3D G3DSA:2.40.30.10 306 404 1.8E-37 T 20-04-2016 APRE_RS02435 9d10cdaa517e448a37e1ae416fb796a2 690 SUPERFAMILY SSF50447 264 404 6.6E-37 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.30.365.10 285 360 2.2E-27 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.30.365.10 136 177 2.2E-27 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 SUPERFAMILY SSF56003 137 754 2.62E-170 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.30.365.10 451 592 1.0E-37 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 149 695 2.3E-157 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.90.1170.50 2 133 3.6E-37 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.30.365.10 178 283 3.1E-29 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 SMART SM01008 17 133 2.9E-33 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 PANTHER PTHR11908 1 564 2.7E-220 T 20-04-2016 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 PANTHER PTHR11908 586 761 2.7E-220 T 20-04-2016 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 17 132 1.4E-24 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 SUPERFAMILY SSF54665 2 155 2.49E-35 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 PANTHER PTHR11908:SF95 1 564 2.7E-220 T 20-04-2016 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 PANTHER PTHR11908:SF95 586 761 2.7E-220 T 20-04-2016 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.30.365.10 361 450 3.6E-61 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS07315 3243d5689f46cecdecd53795a1c8ae2b 764 Gene3D G3DSA:3.30.365.10 610 750 3.6E-61 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APRE_RS03300 d2c9f9852c5e7e6e6695cbd1bd16de58 115 Pfam PF12650 Domain of unknown function (DUF3784) 16 111 3.0E-14 T 20-04-2016 IPR017259 Uncharacterised conserved protein UCP037672 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 Gene3D G3DSA:1.10.1750.10 360 458 8.2E-35 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PANTHER PTHR30050 3 459 2.7E-169 T 20-04-2016 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 189 203 6.7E-46 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 282 6.7E-46 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 157 177 6.7E-46 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 221 235 6.7E-46 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 417 436 6.7E-46 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 Gene3D G3DSA:3.40.50.300 117 286 3.3E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 SMART SM00382 156 287 1.0E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 Pfam PF00308 Bacterial dnaA protein 119 340 5.0E-89 T 20-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 SUPERFAMILY SSF52540 146 335 4.65E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 10 457 1.1E-145 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 PANTHER PTHR30050:SF2 3 459 2.7E-169 T 20-04-2016 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 SMART SM00760 368 436 4.0E-33 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 436 6.0E-27 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 458 29.558 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 SUPERFAMILY SSF48295 360 457 2.88E-31 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APRE_RS00005 9b1172d1c45f8a6f0eacb52981aced0e 459 Gene3D G3DSA:1.10.8.60 290 352 1.4E-21 T 20-04-2016 APRE_RS00300 43bf6d5d473c900cb94e0b2e1abaa4f4 240 SUPERFAMILY SSF51695 1 235 1.73E-69 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APRE_RS00300 43bf6d5d473c900cb94e0b2e1abaa4f4 240 Gene3D G3DSA:3.20.20.190 1 236 3.5E-70 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APRE_RS00300 43bf6d5d473c900cb94e0b2e1abaa4f4 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 230 4.3E-43 T 20-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APRE_RS00300 43bf6d5d473c900cb94e0b2e1abaa4f4 240 PANTHER PTHR23344:SF25 1 239 1.3E-68 T 20-04-2016 APRE_RS00300 43bf6d5d473c900cb94e0b2e1abaa4f4 240 PANTHER PTHR23344 1 239 1.3E-68 T 20-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APRE_RS01965 ff338fa58bbddbcdf51444b95b3cbae0 265 PANTHER PTHR30388 2 260 2.0E-58 T 20-04-2016 APRE_RS01965 ff338fa58bbddbcdf51444b95b3cbae0 265 PANTHER PTHR30388:SF4 2 260 2.0E-58 T 20-04-2016 APRE_RS01965 ff338fa58bbddbcdf51444b95b3cbae0 265 Pfam PF02625 XdhC and CoxI family 14 74 1.3E-13 T 20-04-2016 IPR003777 XdhC- CoxI APRE_RS01965 ff338fa58bbddbcdf51444b95b3cbae0 265 Gene3D G3DSA:3.50.50.60 93 156 9.1E-6 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01965 ff338fa58bbddbcdf51444b95b3cbae0 265 Pfam PF13478 XdhC Rossmann domain 107 250 1.0E-38 T 20-04-2016 IPR027051 XdhC Rossmann domain APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 Gene3D G3DSA:3.90.190.20 292 420 8.9E-33 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 PIRSF PIRSF001563 1 425 1.7E-116 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 PANTHER PTHR11136:SF0 23 420 2.4E-111 T 20-04-2016 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 Pfam PF08245 Mur ligase middle domain 46 266 6.3E-19 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 420 7.6E-106 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 PANTHER PTHR11136 23 420 2.4E-111 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 SUPERFAMILY SSF53244 292 421 1.58E-27 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 Pfam PF02875 Mur ligase family, glutamate ligase domain 291 361 8.7E-8 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 Gene3D G3DSA:3.40.1190.10 9 289 7.4E-79 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS05365 fb61376e78eee6415a8eb0ca913b7527 426 SUPERFAMILY SSF53623 4 288 2.29E-75 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 PANTHER PTHR11931 2 229 1.3E-133 T 20-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 229 1.8E-109 T 20-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 20-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 43.792 T 20-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 127 5.4E-29 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 SUPERFAMILY SSF53254 1 227 2.16E-72 T 20-04-2016 IPR029033 Histidine phosphatase superfamily APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 SMART SM00855 4 190 3.1E-25 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APRE_RS00915 3b840c08697ac468daa6743e072ff22f 229 Gene3D G3DSA:3.40.50.1240 1 227 9.6E-90 T 20-04-2016 IPR029033 Histidine phosphatase superfamily APRE_RS08730 f1fa11f18758a14391583468320b181a 124 PANTHER PTHR36566 1 109 3.4E-14 T 20-04-2016 APRE_RS08730 f1fa11f18758a14391583468320b181a 124 Pfam PF01969 Protein of unknown function DUF111 1 109 7.9E-30 T 20-04-2016 IPR002822 Uncharacterised protein family UPF0272 APRE_RS08730 f1fa11f18758a14391583468320b181a 124 PANTHER PTHR36566:SF1 1 109 3.4E-14 T 20-04-2016 APRE_RS08730 f1fa11f18758a14391583468320b181a 124 Gene3D G3DSA:3.30.70.1380 1 62 7.6E-21 T 20-04-2016 APRE_RS05650 e884584699366351863923173b0c93ad 501 Gene3D G3DSA:3.40.50.1380 2 181 5.2E-72 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APRE_RS05650 e884584699366351863923173b0c93ad 501 SMART SM00798 130 433 4.2E-142 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 PANTHER PTHR11692 2 501 2.7E-232 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 Pfam PF02142 MGS-like domain 12 124 1.3E-20 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APRE_RS05650 e884584699366351863923173b0c93ad 501 Pfam PF01808 AICARFT/IMPCHase bienzyme 130 429 1.5E-103 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 PIRSF PIRSF000414 1 501 3.7E-188 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 SMART SM00851 12 125 7.5E-41 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APRE_RS05650 e884584699366351863923173b0c93ad 501 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 501 2.6E-173 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 PANTHER PTHR11692:SF2 2 501 2.7E-232 T 20-04-2016 APRE_RS05650 e884584699366351863923173b0c93ad 501 Gene3D G3DSA:3.40.140.20 355 491 7.4E-46 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 SUPERFAMILY SSF52335 2 188 4.21E-62 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APRE_RS05650 e884584699366351863923173b0c93ad 501 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 501 38.159 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS05650 e884584699366351863923173b0c93ad 501 SUPERFAMILY SSF53927 201 501 3.31E-107 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APRE_RS05650 e884584699366351863923173b0c93ad 501 Gene3D G3DSA:3.40.140.20 234 349 9.6E-42 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APRE_RS04490 9a575355cc2fff83fdcde400416ad64f 261 Gene3D G3DSA:2.60.200.30 121 238 4.2E-34 T 20-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APRE_RS04490 9a575355cc2fff83fdcde400416ad64f 261 Hamap MF_00361 NAD kinase [nadK]. 3 261 24.623 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APRE_RS04490 9a575355cc2fff83fdcde400416ad64f 261 Gene3D G3DSA:3.40.50.10330 34 120 8.9E-21 T 20-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APRE_RS04490 9a575355cc2fff83fdcde400416ad64f 261 Pfam PF01513 ATP-NAD kinase 35 239 1.4E-36 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APRE_RS04490 9a575355cc2fff83fdcde400416ad64f 261 PANTHER PTHR20275 46 261 3.7E-54 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APRE_RS04490 9a575355cc2fff83fdcde400416ad64f 261 SUPERFAMILY SSF111331 17 260 1.22E-60 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 Gene3D G3DSA:1.10.287.130 147 205 7.4E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 SUPERFAMILY SSF47384 141 217 7.06E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 367 3.7E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 325 3.7E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 311 3.7E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 3.7E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 SUPERFAMILY SSF55874 210 366 5.24E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 217 2.2E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 366 4.4E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 SMART SM00388 155 220 5.8E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 Gene3D G3DSA:3.30.565.10 206 366 9.3E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 PANTHER PTHR24423 1 7 1.5E-69 T 20-04-2016 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 PANTHER PTHR24423 92 366 1.5E-69 T 20-04-2016 APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 SMART SM00387 260 369 1.8E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS00455 05547f760a42e7151f81dc2f367863d3 369 Pfam PF00672 HAMP domain 79 149 3.0E-7 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 PANTHER PTHR23028:SF53 2 168 2.6E-40 T 20-04-2016 APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 PANTHER PTHR23028:SF53 184 450 2.6E-40 T 20-04-2016 APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 Gene3D G3DSA:3.40.50.1110 421 583 2.0E-6 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 PANTHER PTHR23028 2 168 2.6E-40 T 20-04-2016 APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 PANTHER PTHR23028 184 450 2.6E-40 T 20-04-2016 APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 SUPERFAMILY SSF52266 420 584 4.4E-8 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS01650 135d45d74427b48a990d37814a52c5ca 592 Pfam PF01757 Acyltransferase family 4 328 4.0E-21 T 20-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APRE_RS00250 dea3e19531f55801a9fc13dffb9283a4 302 Pfam PF00892 EamA-like transporter family 163 296 3.5E-12 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APRE_RS00250 dea3e19531f55801a9fc13dffb9283a4 302 Pfam PF00892 EamA-like transporter family 7 151 3.0E-17 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APRE_RS00250 dea3e19531f55801a9fc13dffb9283a4 302 PANTHER PTHR22911 4 301 1.8E-33 T 20-04-2016 APRE_RS00250 dea3e19531f55801a9fc13dffb9283a4 302 SUPERFAMILY SSF103481 51 153 1.03E-9 T 20-04-2016 APRE_RS00250 dea3e19531f55801a9fc13dffb9283a4 302 SUPERFAMILY SSF103481 200 300 2.48E-9 T 20-04-2016 APRE_RS00250 dea3e19531f55801a9fc13dffb9283a4 302 PANTHER PTHR22911:SF23 4 301 1.8E-33 T 20-04-2016 APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 SUPERFAMILY SSF54197 1 112 8.66E-39 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 PRINTS PR00332 Histidine triad family signature 25 43 8.8E-20 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 PRINTS PR00332 Histidine triad family signature 4 20 8.8E-20 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 PRINTS PR00332 Histidine triad family signature 93 103 8.8E-20 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 Gene3D G3DSA:3.30.428.10 2 113 1.4E-41 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 Pfam PF01230 HIT domain 11 106 2.8E-29 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 PANTHER PTHR23089 2 113 5.9E-50 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 PANTHER PTHR23089:SF3 2 113 5.9E-50 T 20-04-2016 APRE_RS05925 25e8d1199d26bde9330aba4432138a45 113 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 20-04-2016 IPR019808 Histidine triad, conserved site APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 398 3.6E-166 T 20-04-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 PANTHER PTHR10314 111 413 5.3E-135 T 20-04-2016 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 SUPERFAMILY SSF53686 31 359 1.31E-59 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 PANTHER PTHR10314 24 89 5.3E-135 T 20-04-2016 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 399 1.5E-186 T 20-04-2016 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 Gene3D G3DSA:3.40.50.1100 104 182 9.2E-23 T 20-04-2016 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 39 365 8.6E-55 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 PANTHER PTHR10314:SF127 24 89 5.3E-135 T 20-04-2016 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 Gene3D G3DSA:3.40.50.1100 183 396 2.8E-14 T 20-04-2016 APRE_RS07365 15d9741a8f1fdb7a229b81e4fe9ce335 413 PANTHER PTHR10314:SF127 111 413 5.3E-135 T 20-04-2016 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 38.627 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Gene3D G3DSA:3.60.20.10 2 238 9.5E-79 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 SUPERFAMILY SSF53697 245 607 1.39E-101 T 20-04-2016 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 5.9E-238 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 PANTHER PTHR10937 1 607 0.0 T 20-04-2016 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Pfam PF13522 Glutamine amidotransferase domain 63 192 6.5E-24 T 20-04-2016 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 SUPERFAMILY SSF56235 2 233 2.57E-70 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Gene3D G3DSA:3.40.50.10490 441 607 6.8E-60 T 20-04-2016 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 PANTHER PTHR10937:SF0 1 607 0.0 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Pfam PF01380 SIS domain 460 588 1.5E-23 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Pfam PF01380 SIS domain 290 414 1.7E-30 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS00105 9ccee853a8ee00c31ff22e84c335ff92 607 Gene3D G3DSA:3.40.50.10490 243 440 2.9E-57 T 20-04-2016 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PANTHER PTHR11958 2 394 6.9E-111 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 2.2E-13 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PRINTS PR00173 Glutamate-aspartate symporter signature 284 310 2.2E-13 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PRINTS PR00173 Glutamate-aspartate symporter signature 6 31 2.2E-13 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PRINTS PR00173 Glutamate-aspartate symporter signature 135 157 2.2E-13 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PRINTS PR00173 Glutamate-aspartate symporter signature 182 201 2.2E-13 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 PANTHER PTHR11958:SF61 2 394 6.9E-111 T 20-04-2016 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 SUPERFAMILY SSF118215 12 392 2.09E-78 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 Pfam PF00375 Sodium:dicarboxylate symporter family 13 392 3.1E-86 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01530 2c940bc144f1ca477d75d36de88e4293 395 Gene3D G3DSA:1.10.3860.10 2 394 3.5E-75 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 Pfam PF03830 PTS system sorbose subfamily IIB component 165 311 1.2E-45 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 Gene3D G3DSA:3.40.50.510 1 138 1.0E-47 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 PANTHER PTHR33799:SF7 2 326 4.6E-141 T 20-04-2016 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 SUPERFAMILY SSF53062 1 129 3.27E-37 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 SUPERFAMILY SSF52728 164 322 5.23E-48 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 Gene3D G3DSA:3.40.35.10 164 323 2.4E-56 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 Pfam PF03610 PTS system fructose IIA component 3 116 8.6E-33 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS01020 cc57b114a1254d3bf5d9a41230141d41 329 PANTHER PTHR33799 2 326 4.6E-141 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Pfam PF04983 RNA polymerase Rpb1, domain 3 480 637 2.5E-23 T 20-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Pfam PF04998 RNA polymerase Rpb1, domain 5 974 1101 2.6E-16 T 20-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Pfam PF04998 RNA polymerase Rpb1, domain 5 744 959 5.9E-48 T 20-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1153 0.0 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Gene3D G3DSA:2.40.40.20 340 367 1.4E-36 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Gene3D G3DSA:2.40.40.20 408 480 1.4E-36 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 SUPERFAMILY SSF64484 5 1152 0.0 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Gene3D G3DSA:2.40.50.100 943 998 3.1E-13 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 SMART SM00663 226 505 1.4E-171 T 20-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Pfam PF05000 RNA polymerase Rpb1, domain 4 666 737 2.1E-12 T 20-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1162 10.093 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Pfam PF00623 RNA polymerase Rpb1, domain 2 335 476 7.5E-35 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 PANTHER PTHR19376:SF32 1 1048 0.0 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 PANTHER PTHR19376:SF32 1089 1149 0.0 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 333 3.8E-86 T 20-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 PANTHER PTHR19376 1 1048 0.0 T 20-04-2016 APRE_RS02375 11d19854df8f91d346167cd6529f10fa 1188 PANTHER PTHR19376 1089 1149 0.0 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 Pfam PF01546 Peptidase family M20/M25/M40 148 411 8.1E-11 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 147 186 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 Gene3D G3DSA:3.30.70.360 220 329 1.0E-37 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 Pfam PF07687 Peptidase dimerisation domain 217 318 9.0E-7 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 Gene3D G3DSA:3.40.630.10 333 412 3.2E-94 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 Gene3D G3DSA:3.40.630.10 4 219 3.2E-94 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 SUPERFAMILY SSF53187 8 220 3.77E-62 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 SUPERFAMILY SSF53187 333 411 3.77E-62 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 SUPERFAMILY SSF55031 219 329 1.78E-29 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 PANTHER PTHR11014:SF3 3 99 2.8E-136 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 PANTHER PTHR11014:SF3 140 412 2.8E-136 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 TIGRFAM TIGR01882 peptidase-T: peptidase T 8 412 8.9E-109 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 PIRSF PIRSF037215 5 414 4.5E-144 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 PANTHER PTHR11014 3 99 2.8E-136 T 20-04-2016 APRE_RS05455 640e392459e19b15e3cb6487207fcea3 414 PANTHER PTHR11014 140 412 2.8E-136 T 20-04-2016 APRE_RS05055 e1e0170d826f7ceda18b4d4f45da99b0 162 PIRSF PIRSF031501 1 159 2.0E-33 T 20-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 APRE_RS05055 e1e0170d826f7ceda18b4d4f45da99b0 162 PANTHER PTHR40044 1 162 1.1E-29 T 20-04-2016 APRE_RS05055 e1e0170d826f7ceda18b4d4f45da99b0 162 Pfam PF06177 QueT transporter 10 151 1.2E-34 T 20-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 APRE_RS05055 e1e0170d826f7ceda18b4d4f45da99b0 162 PANTHER PTHR40044:SF1 1 162 1.1E-29 T 20-04-2016 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 PANTHER PTHR30109:SF0 1 533 3.7E-256 T 20-04-2016 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 Gene3D G3DSA:1.20.1270.20 1 141 7.2E-38 T 20-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 Gene3D G3DSA:1.20.1270.20 142 215 2.2E-27 T 20-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 PANTHER PTHR30109 1 533 3.7E-256 T 20-04-2016 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 PIRSF PIRSF000076 1 538 1.5E-244 T 20-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 SUPERFAMILY SSF56821 1 535 7.2E-197 T 20-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 Pfam PF03063 Prismane/CO dehydrogenase family 1 533 7.2E-175 T 20-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 Gene3D G3DSA:3.40.50.2030 219 366 1.3E-66 T 20-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 Gene3D G3DSA:3.40.50.2030 367 533 1.5E-74 T 20-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 533 2.8E-215 T 20-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS01230 a8db31692b2bfa3f6b963a11d93c6929 538 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 538 22.148 T 20-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APRE_RS02735 8a26ab99242d9ecf1cbc776578af0573 269 SUPERFAMILY SSF81345 3 255 2.62E-29 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS02735 8a26ab99242d9ecf1cbc776578af0573 269 Gene3D G3DSA:1.10.3470.10 9 259 6.2E-5 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS02735 8a26ab99242d9ecf1cbc776578af0573 269 Pfam PF00950 ABC 3 transport family 3 257 5.8E-53 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APRE_RS02735 8a26ab99242d9ecf1cbc776578af0573 269 PANTHER PTHR30477 1 265 1.1E-65 T 20-04-2016 APRE_RS02735 8a26ab99242d9ecf1cbc776578af0573 269 PANTHER PTHR30477:SF0 1 265 1.1E-65 T 20-04-2016 APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 Pfam PF00027 Cyclic nucleotide-binding domain 30 113 7.8E-15 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 Gene3D G3DSA:2.60.120.10 3 140 2.1E-26 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 SMART SM00419 159 207 9.6E-5 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 SUPERFAMILY SSF46785 146 214 4.66E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 SMART SM00100 8 126 4.1E-11 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 SUPERFAMILY SSF51206 3 136 4.32E-25 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 Gene3D G3DSA:1.10.10.10 147 214 7.8E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 PANTHER PTHR24567 1 215 4.9E-36 T 20-04-2016 APRE_RS08100 f05e4e658be6dbe3754be051f040eeb5 215 Pfam PF13545 Crp-like helix-turn-helix domain 148 212 1.3E-16 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.7E-50 T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 232 3.3E-26 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 7.0E-59 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 PANTHER PTHR10000 1 266 1.1E-55 T 20-04-2016 APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 SUPERFAMILY SSF56784 1 265 1.17E-62 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 PANTHER PTHR10000:SF8 1 266 1.1E-55 T 20-04-2016 APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 Gene3D G3DSA:3.40.50.1000 168 266 3.7E-48 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07130 53059312d37fd82c932d05a352ccb7fa 267 Gene3D G3DSA:3.40.50.1000 1 75 3.7E-48 T 20-04-2016 IPR023214 HAD-like domain APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-18 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.0E-18 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.0E-18 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 Gene3D G3DSA:1.10.1130.10 9 47 9.8E-4 T 20-04-2016 IPR012286 Tetrahaem cytochrome domain APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 SUPERFAMILY SSF143800 1 65 4.71E-26 T 20-04-2016 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 PANTHER PTHR33280 1 66 7.2E-31 T 20-04-2016 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 3.3E-29 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 Pfam PF01197 Ribosomal protein L31 1 65 9.3E-30 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03885 e09b3787de6409f5468bd263e3d863a6 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 25.408 T 20-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 Pfam PF03572 Peptidase family S41 196 408 6.5E-26 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 Pfam PF14684 Tricorn protease C1 domain 54 119 1.5E-8 T 20-04-2016 IPR028204 Tricorn protease C1 domain APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 SUPERFAMILY SSF52096 50 130 1.99E-37 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 SUPERFAMILY SSF52096 169 264 1.99E-37 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 SUPERFAMILY SSF52096 308 411 1.99E-37 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 Gene3D G3DSA:3.90.226.10 185 262 6.9E-31 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 Gene3D G3DSA:3.90.226.10 308 413 6.9E-31 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS03850 a25f1a804ddf5d3857ea14363b8c34eb 435 Gene3D G3DSA:3.30.750.44 73 120 5.7E-6 T 20-04-2016 APRE_RS04660 fbf531bf682177e5f1839f8fcddcac57 149 PANTHER PTHR10472 2 148 6.7E-70 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APRE_RS04660 fbf531bf682177e5f1839f8fcddcac57 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.8E-54 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APRE_RS04660 fbf531bf682177e5f1839f8fcddcac57 149 Gene3D G3DSA:3.50.80.10 1 145 8.0E-59 T 20-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APRE_RS04660 fbf531bf682177e5f1839f8fcddcac57 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.8E-57 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APRE_RS04660 fbf531bf682177e5f1839f8fcddcac57 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.649 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APRE_RS04660 fbf531bf682177e5f1839f8fcddcac57 149 SUPERFAMILY SSF69500 1 145 1.09E-54 T 20-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PANTHER PTHR34448:SF3 1 410 2.1E-189 T 20-04-2016 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 154 176 1.2E-51 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 364 386 1.2E-51 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 302 322 1.2E-51 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 325 346 1.2E-51 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 12 29 1.2E-51 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 246 265 1.2E-51 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 PANTHER PTHR34448 1 410 2.1E-189 T 20-04-2016 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 SUPERFAMILY SSF144052 1 409 1.7E-129 T 20-04-2016 APRE_RS08440 59f9d9930be254b334d239eb534043ac 410 Pfam PF02073 Thermophilic metalloprotease (M29) 2 408 4.3E-164 T 20-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 124 2.3E-23 T 20-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 445 463 - T 20-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 SUPERFAMILY SSF47831 32 141 5.1E-22 T 20-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 Gene3D G3DSA:1.10.274.10 27 131 2.4E-24 T 20-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 PIRSF PIRSF000732 1 567 3.7E-200 T 20-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 Pfam PF00391 PEP-utilising enzyme, mobile domain 150 223 5.3E-19 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 Gene3D G3DSA:3.50.30.10 132 252 3.9E-36 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 SUPERFAMILY SSF51621 248 545 2.62E-99 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 Gene3D G3DSA:3.20.20.60 253 566 6.2E-105 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 291 310 3.0E-24 T 20-04-2016 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 462 477 3.0E-24 T 20-04-2016 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 3.0E-24 T 20-04-2016 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 498 510 3.0E-24 T 20-04-2016 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 249 535 4.3E-112 T 20-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 SUPERFAMILY SSF52009 123 243 3.01E-29 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 564 6.2E-186 T 20-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APRE_RS04520 9320ad159440a927dd0c66ff0dc51afd 567 PANTHER PTHR22931 73 548 4.5E-168 T 20-04-2016 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.7E-24 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 PANTHER PTHR18804:SF7 1 37 4.8E-20 T 20-04-2016 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 2.0E-8 T 20-04-2016 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 Pfam PF00444 Ribosomal protein L36 1 37 4.0E-20 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 PANTHER PTHR18804 1 37 4.8E-20 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 18.086 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07955 caebca5882927c4f569be86ca2cf5357 37 SUPERFAMILY SSF57840 1 37 1.57E-17 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 Gene3D G3DSA:3.40.50.150 250 372 1.1E-32 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 Gene3D G3DSA:3.40.50.150 147 213 1.1E-32 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 PANTHER PTHR18895:SF62 252 374 7.0E-60 T 20-04-2016 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 PANTHER PTHR18895:SF62 40 217 7.0E-60 T 20-04-2016 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 SUPERFAMILY SSF53335 145 216 2.03E-34 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 SUPERFAMILY SSF53335 253 362 2.03E-34 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 PANTHER PTHR18895 252 374 7.0E-60 T 20-04-2016 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 PANTHER PTHR18895 40 217 7.0E-60 T 20-04-2016 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 194 205 - T 20-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 Pfam PF01170 Putative RNA methylase family UPF0020 161 363 2.0E-42 T 20-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 206 2.9E-5 T 20-04-2016 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 308 2.9E-5 T 20-04-2016 APRE_RS07300 36ea00c60113b523af7e770a678d6373 375 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APRE_RS06285 26f64c021c254d1bccd4485a04c1b45a 221 Pfam PF06149 Protein of unknown function (DUF969) 3 218 9.3E-81 T 20-04-2016 IPR010374 Protein of unknown function DUF969 APRE_RS06285 26f64c021c254d1bccd4485a04c1b45a 221 PANTHER PTHR41293 1 217 1.6E-65 T 20-04-2016 APRE_RS06285 26f64c021c254d1bccd4485a04c1b45a 221 PANTHER PTHR41293:SF1 1 217 1.6E-65 T 20-04-2016 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 9.2E-28 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 1.7E-75 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 PANTHER PTHR30053 1 185 2.2E-81 T 20-04-2016 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Gene3D G3DSA:2.40.50.140 128 185 4.3E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 SUPERFAMILY SSF50104 1 63 1.26E-20 T 20-04-2016 IPR008991 Translation protein SH3-like domain APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 20-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 SUPERFAMILY SSF50249 65 129 4.86E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 SUPERFAMILY SSF50249 128 185 2.74E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 PIRSF PIRSF005901 1 185 2.7E-64 T 20-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 48.297 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Gene3D G3DSA:2.30.30.30 1 63 7.9E-26 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Gene3D G3DSA:2.40.50.140 65 127 2.7E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 6.1E-20 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 SMART SM01185 67 121 7.6E-23 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.2E-23 T 20-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APRE_RS05280 7fba39843fa4fe1442738db2d1268033 185 SMART SM00841 129 184 1.3E-34 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 Pfam PF00005 ABC transporter 364 513 5.0E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 SUPERFAMILY SSF52540 334 582 1.3E-90 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 Gene3D G3DSA:1.20.1560.10 13 323 2.4E-69 T 20-04-2016 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 SUPERFAMILY SSF90123 9 327 5.62E-70 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 Pfam PF00664 ABC transporter transmembrane region 27 296 1.3E-43 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 SMART SM00382 373 559 3.5E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 PANTHER PTHR24221 8 581 9.1E-217 T 20-04-2016 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02905 d425407fea51ca6778a22f9fd6b79893 589 Gene3D G3DSA:3.40.50.300 343 578 5.8E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 Gene3D G3DSA:3.30.1180.10 166 299 2.1E-37 T 20-04-2016 APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 PANTHER PTHR33434:SF3 1 301 4.0E-60 T 20-04-2016 APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 17 296 1.7E-75 T 20-04-2016 IPR003797 DegV APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 SUPERFAMILY SSF82549 15 299 1.23E-74 T 20-04-2016 APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 PANTHER PTHR33434 1 301 4.0E-60 T 20-04-2016 APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 Pfam PF02645 Uncharacterised protein, DegV family COG1307 18 296 2.5E-68 T 20-04-2016 IPR003797 DegV APRE_RS05390 083d1f37cc0fa5b9789e77d28e38ad69 303 Gene3D G3DSA:3.40.50.10170 13 161 1.0E-38 T 20-04-2016 APRE_RS08520 7f3d2ff59b4c33c987998ba2ac916a67 128 SUPERFAMILY SSF53062 2 127 7.19E-31 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS08520 7f3d2ff59b4c33c987998ba2ac916a67 128 Pfam PF03610 PTS system fructose IIA component 5 105 2.2E-24 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS08520 7f3d2ff59b4c33c987998ba2ac916a67 128 PANTHER PTHR33799 3 124 3.1E-21 T 20-04-2016 APRE_RS08520 7f3d2ff59b4c33c987998ba2ac916a67 128 Gene3D G3DSA:3.40.50.510 3 127 3.6E-33 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS01330 75294e19149229f3fcdc0df8d2792fea 288 SUPERFAMILY SSF161098 7 285 1.59E-52 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01330 75294e19149229f3fcdc0df8d2792fea 288 Gene3D G3DSA:1.10.3720.10 4 279 3.1E-57 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01330 75294e19149229f3fcdc0df8d2792fea 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 285 3.1E-16 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01330 75294e19149229f3fcdc0df8d2792fea 288 PANTHER PTHR30193:SF6 1 287 8.8E-91 T 20-04-2016 APRE_RS01330 75294e19149229f3fcdc0df8d2792fea 288 PANTHER PTHR30193 1 287 8.8E-91 T 20-04-2016 APRE_RS00940 bd1dc07db1784f984258f503e6f5a7d9 146 SUPERFAMILY SSF55729 1 144 1.8E-36 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS00940 bd1dc07db1784f984258f503e6f5a7d9 146 Gene3D G3DSA:3.40.630.30 1 144 3.1E-37 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS00940 bd1dc07db1784f984258f503e6f5a7d9 146 PANTHER PTHR23091 1 144 7.6E-35 T 20-04-2016 APRE_RS00940 bd1dc07db1784f984258f503e6f5a7d9 146 Pfam PF00583 Acetyltransferase (GNAT) family 45 121 3.0E-21 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS00940 bd1dc07db1784f984258f503e6f5a7d9 146 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 140 4.2E-39 T 20-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 APRE_RS00940 bd1dc07db1784f984258f503e6f5a7d9 146 PIRSF PIRSF037663 1 139 1.1E-10 T 20-04-2016 IPR017255 Acetyltransferase, GNAT, predicted APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 208 498 3.6E-48 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PIRSF PIRSF000238 1 512 2.0E-211 T 20-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 Gene3D G3DSA:3.40.30.10 1 92 5.7E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 332 344 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 472 490 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 437 458 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 256 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 271 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 310 318 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 399 415 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 209 231 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 347 371 5.2E-61 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 SUPERFAMILY SSF52833 102 193 1.94E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 Pfam PF13192 Thioredoxin domain 122 192 4.1E-7 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 511 9.7E-200 T 20-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PANTHER PTHR22912 194 508 2.4E-149 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 Gene3D G3DSA:3.40.30.10 101 193 6.7E-30 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 Gene3D G3DSA:3.50.50.60 314 506 7.1E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 SUPERFAMILY SSF51905 204 509 7.66E-49 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 339 359 - T 20-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 462 484 2.8E-35 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 210 229 2.8E-35 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 309 327 2.8E-35 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 369 2.8E-35 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 435 451 2.8E-35 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 Gene3D G3DSA:3.50.50.60 205 313 7.1E-25 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 PANTHER PTHR22912:SF107 194 508 2.4E-149 T 20-04-2016 APRE_RS00235 ea795eafdd7749a5a90c489fb569f8d7 512 SUPERFAMILY SSF52833 1 98 6.71E-23 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS02570 cc33c07a0832e4c7e0ed343d84283255 654 PANTHER PTHR31998:SF0 1 654 0.0 T 20-04-2016 APRE_RS02570 cc33c07a0832e4c7e0ed343d84283255 654 PIRSF PIRSF001265 1 654 2.1E-254 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APRE_RS02570 cc33c07a0832e4c7e0ed343d84283255 654 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 3 653 5.0E-241 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APRE_RS02570 cc33c07a0832e4c7e0ed343d84283255 654 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 654 23.926 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APRE_RS02570 cc33c07a0832e4c7e0ed343d84283255 654 PANTHER PTHR31998 1 654 0.0 T 20-04-2016 APRE_RS02570 cc33c07a0832e4c7e0ed343d84283255 654 Pfam PF03030 Inorganic H+ pyrophosphatase 15 648 4.2E-259 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APRE_RS05580 fdc2bf5c39da3a744a9923b7827ba920 143 Pfam PF13302 Acetyltransferase (GNAT) domain 13 130 1.5E-10 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS05580 fdc2bf5c39da3a744a9923b7827ba920 143 Gene3D G3DSA:3.40.630.30 13 133 8.3E-23 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS05580 fdc2bf5c39da3a744a9923b7827ba920 143 SUPERFAMILY SSF55729 13 134 2.79E-19 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS08320 e35e3b01f05b34897e259ac7a7d872e5 301 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 296 5.2E-28 T 20-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APRE_RS08320 e35e3b01f05b34897e259ac7a7d872e5 301 SUPERFAMILY SSF53067 4 111 4.44E-8 T 20-04-2016 APRE_RS08320 e35e3b01f05b34897e259ac7a7d872e5 301 SUPERFAMILY SSF53067 116 297 4.97E-39 T 20-04-2016 APRE_RS08320 e35e3b01f05b34897e259ac7a7d872e5 301 Gene3D G3DSA:3.30.420.40 199 277 3.6E-4 T 20-04-2016 APRE_RS08320 e35e3b01f05b34897e259ac7a7d872e5 301 PANTHER PTHR12862 1 296 4.4E-46 T 20-04-2016 APRE_RS08290 4c9af787e73ae2ae30733152398c3506 314 PANTHER PTHR32196:SF21 11 314 6.7E-123 T 20-04-2016 APRE_RS08290 4c9af787e73ae2ae30733152398c3506 314 PANTHER PTHR32196 11 314 6.7E-123 T 20-04-2016 APRE_RS08290 4c9af787e73ae2ae30733152398c3506 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 2.8E-54 T 20-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 7.7E-16 T 20-04-2016 IPR020603 MraZ domain APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 Pfam PF02381 MraZ protein, putative antitoxin-like 72 133 1.1E-14 T 20-04-2016 IPR020603 MraZ domain APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 137 41.686 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 134 1.0E-30 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 132 1.8E-36 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 SUPERFAMILY SSF89447 1 135 1.47E-42 T 20-04-2016 APRE_RS06145 3eca8784c9de1443e0bb9d62f7c0f9d0 137 PANTHER PTHR34701 2 137 2.0E-38 T 20-04-2016 APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 SUPERFAMILY SSF55315 1 91 1.32E-17 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 Pfam PF00588 SpoU rRNA Methylase family 101 236 3.0E-32 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 PANTHER PTHR12029 2 236 7.3E-56 T 20-04-2016 APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 SUPERFAMILY SSF75217 97 236 7.33E-32 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 SMART SM00967 30 94 0.0012 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 Gene3D G3DSA:3.30.1330.30 3 91 5.1E-21 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APRE_RS06875 b5ee07e378ab4bf4a08c49bbb48364e6 241 Gene3D G3DSA:3.40.1280.10 97 237 3.9E-39 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APRE_RS01685 d4cf883c0f9c06585ec91370480075ef 279 SUPERFAMILY SSF53590 8 277 3.01E-30 T 20-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APRE_RS01685 d4cf883c0f9c06585ec91370480075ef 279 PANTHER PTHR12304 19 202 1.2E-16 T 20-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase APRE_RS01685 d4cf883c0f9c06585ec91370480075ef 279 Gene3D G3DSA:3.90.245.10 8 277 3.5E-27 T 20-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APRE_RS01685 d4cf883c0f9c06585ec91370480075ef 279 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 8 270 5.0E-22 T 20-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 Pfam PF00574 Clp protease 17 196 2.0E-86 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 7 195 1.3E-100 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 PANTHER PTHR10381 7 196 7.7E-128 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 116 129 - T 20-04-2016 IPR033135 ClpP, histidine active site APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 43.348 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 1.0E-49 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 1.0E-49 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 1.0E-49 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 1.0E-49 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 1.0E-49 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 94 105 - T 20-04-2016 IPR018215 ClpP, Ser active site APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 Gene3D G3DSA:3.90.226.10 7 195 1.2E-87 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS02020 f13e574ceb4586120399c0641cb4eae3 197 SUPERFAMILY SSF52096 14 196 6.46E-72 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 PANTHER PTHR30009 3 529 9.6E-185 T 20-04-2016 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 SUPERFAMILY SSF55604 454 528 1.57E-17 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 467 484 - T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 Gene3D G3DSA:3.30.1360.60 451 528 4.3E-22 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 3 528 1.8E-198 T 20-04-2016 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 Pfam PF00367 phosphotransferase system, EIIB 457 488 3.3E-16 T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 PANTHER PTHR30009:SF12 3 529 9.6E-185 T 20-04-2016 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 Pfam PF02378 Phosphotransferase system, EIIC 10 345 8.8E-56 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS02405 28fcc927ee011774f93762499c9b16a8 529 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 407 514 6.3E-16 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS05470 eb946f66a8e7c9606f2e684a7cfc4f80 259 Gene3D G3DSA:3.40.50.880 42 255 2.7E-43 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS05470 eb946f66a8e7c9606f2e684a7cfc4f80 259 PANTHER PTHR11922 75 254 2.6E-52 T 20-04-2016 APRE_RS05470 eb946f66a8e7c9606f2e684a7cfc4f80 259 PANTHER PTHR11922:SF18 75 254 2.6E-52 T 20-04-2016 APRE_RS05470 eb946f66a8e7c9606f2e684a7cfc4f80 259 Pfam PF07722 Peptidase C26 66 234 5.3E-50 T 20-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 APRE_RS05470 eb946f66a8e7c9606f2e684a7cfc4f80 259 SUPERFAMILY SSF52317 32 253 3.06E-40 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS03640 071865107666610768a4e129448b3aca 313 Gene3D G3DSA:3.40.50.1980 182 313 2.4E-44 T 20-04-2016 APRE_RS03640 071865107666610768a4e129448b3aca 313 Gene3D G3DSA:3.40.50.1980 39 181 2.4E-38 T 20-04-2016 APRE_RS03640 071865107666610768a4e129448b3aca 313 PANTHER PTHR30477:SF16 7 312 1.6E-76 T 20-04-2016 APRE_RS03640 071865107666610768a4e129448b3aca 313 SUPERFAMILY SSF53807 34 313 3.09E-68 T 20-04-2016 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00691 Adhesin B signature 62 80 2.4E-21 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00691 Adhesin B signature 81 100 2.4E-21 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00691 Adhesin B signature 37 58 2.4E-21 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00691 Adhesin B signature 190 207 2.4E-21 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00691 Adhesin B signature 239 256 2.4E-21 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00690 Adhesin family signature 37 55 1.1E-28 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00690 Adhesin family signature 81 98 1.1E-28 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00690 Adhesin family signature 68 81 1.1E-28 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00690 Adhesin family signature 190 211 1.1E-28 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 PRINTS PR00690 Adhesin family signature 278 297 1.1E-28 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS03640 071865107666610768a4e129448b3aca 313 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 310 5.9E-65 T 20-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APRE_RS03640 071865107666610768a4e129448b3aca 313 PANTHER PTHR30477 7 312 1.6E-76 T 20-04-2016 APRE_RS02835 8362992767056a1808e1541be481d819 319 Gene3D G3DSA:3.40.50.300 113 304 5.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02835 8362992767056a1808e1541be481d819 319 PANTHER PTHR30050 149 319 7.4E-31 T 20-04-2016 APRE_RS02835 8362992767056a1808e1541be481d819 319 Pfam PF01695 IstB-like ATP binding protein 171 293 8.0E-16 T 20-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APRE_RS02835 8362992767056a1808e1541be481d819 319 SMART SM00382 175 309 2.2E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02835 8362992767056a1808e1541be481d819 319 SUPERFAMILY SSF52540 155 305 8.13E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 SUPERFAMILY SSF51735 194 215 6.45E-21 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 SUPERFAMILY SSF51735 41 166 6.45E-21 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 28 144 3.9E-10 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 PANTHER PTHR22604 28 285 1.5E-32 T 20-04-2016 APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 Gene3D G3DSA:3.30.360.10 150 355 1.1E-46 T 20-04-2016 APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 SUPERFAMILY SSF55347 157 332 1.26E-25 T 20-04-2016 APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 Gene3D G3DSA:3.40.50.720 29 149 1.4E-23 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08170 b4f0eefb384a3dd993bd1648a93cfb1a 359 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 159 272 2.8E-8 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 Gene3D G3DSA:3.30.70.360 209 317 1.7E-38 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 PANTHER PTHR11014 2 92 9.2E-153 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 PANTHER PTHR11014 130 406 9.2E-153 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 PIRSF PIRSF037215 1 406 1.3E-162 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 403 3.5E-148 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 137 176 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 Gene3D G3DSA:3.40.630.10 1 208 4.7E-101 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 Gene3D G3DSA:3.40.630.10 320 404 4.7E-101 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 Pfam PF07687 Peptidase dimerisation domain 206 304 7.5E-7 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 SUPERFAMILY SSF53187 320 404 9.67E-66 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 SUPERFAMILY SSF53187 1 209 9.67E-66 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 Pfam PF01546 Peptidase family M20/M25/M40 138 400 1.5E-9 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 SUPERFAMILY SSF55031 208 318 1.99E-30 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 PANTHER PTHR11014:SF3 2 92 9.2E-153 T 20-04-2016 APRE_RS04830 00bdb2592c348fb5299d50b3af925865 406 PANTHER PTHR11014:SF3 130 406 9.2E-153 T 20-04-2016 APRE_RS03580 b5d0457330d2ccc307d4cbfcdfb147e2 260 Pfam PF00005 ABC transporter 18 173 1.6E-24 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03580 b5d0457330d2ccc307d4cbfcdfb147e2 260 SUPERFAMILY SSF52540 4 235 1.11E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03580 b5d0457330d2ccc307d4cbfcdfb147e2 260 Gene3D G3DSA:3.40.50.300 4 242 2.7E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03580 b5d0457330d2ccc307d4cbfcdfb147e2 260 PANTHER PTHR24220 18 243 5.9E-57 T 20-04-2016 APRE_RS03580 b5d0457330d2ccc307d4cbfcdfb147e2 260 SMART SM00382 27 220 1.0E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03580 b5d0457330d2ccc307d4cbfcdfb147e2 260 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 Gene3D G3DSA:3.30.70.580 2 106 1.6E-30 T 20-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 3 246 30.755 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 PANTHER PTHR11142:SF0 2 246 3.0E-68 T 20-04-2016 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 PANTHER PTHR11142 2 246 3.0E-68 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 Pfam PF01416 tRNA pseudouridine synthase 146 246 4.1E-19 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 Pfam PF01416 tRNA pseudouridine synthase 10 105 3.8E-6 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 241 3.6E-56 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 Gene3D G3DSA:3.30.70.660 108 245 5.1E-34 T 20-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 SUPERFAMILY SSF55120 3 246 2.01E-68 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07275 d160f32ac5d00aab3a0cc6bf9bec9bd4 246 PIRSF PIRSF001430 2 246 3.0E-68 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS08390 d5e6a992abeaba09529fa88f125ddd4b 470 SUPERFAMILY SSF101960 37 467 1.27E-126 T 20-04-2016 APRE_RS08390 d5e6a992abeaba09529fa88f125ddd4b 470 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 461 1.4E-199 T 20-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APRE_RS08390 d5e6a992abeaba09529fa88f125ddd4b 470 PANTHER PTHR30508 5 470 2.3E-183 T 20-04-2016 APRE_RS08390 d5e6a992abeaba09529fa88f125ddd4b 470 PANTHER PTHR30508:SF1 5 470 2.3E-183 T 20-04-2016 APRE_RS08390 d5e6a992abeaba09529fa88f125ddd4b 470 Pfam PF01458 Uncharacterized protein family (UPF0051) 216 441 7.2E-73 T 20-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APRE_RS04430 3c6ffa898dd8734d25ff0ec21e0c8b3f 249 Gene3D G3DSA:3.90.1720.10 3 136 1.9E-14 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS04430 3c6ffa898dd8734d25ff0ec21e0c8b3f 249 Pfam PF08460 Bacterial SH3 domain 186 234 3.4E-8 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS04430 3c6ffa898dd8734d25ff0ec21e0c8b3f 249 Pfam PF05382 Bacteriophage peptidoglycan hydrolase 36 132 5.8E-22 T 20-04-2016 IPR008044 Bacteriophage lysin APRE_RS04430 3c6ffa898dd8734d25ff0ec21e0c8b3f 249 SUPERFAMILY SSF54001 4 137 1.83E-10 T 20-04-2016 APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 Gene3D G3DSA:3.90.226.10 56 161 1.2E-56 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 Gene3D G3DSA:3.90.226.10 199 275 1.2E-56 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 63 267 3.8E-70 T 20-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 Pfam PF01343 Peptidase family S49 121 272 1.5E-48 T 20-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 PANTHER PTHR33209 19 290 3.7E-80 T 20-04-2016 APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 SUPERFAMILY SSF52096 53 169 1.4E-43 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS08705 241585e8e02a529a73bd4aea40381860 327 SUPERFAMILY SSF52096 198 260 1.4E-43 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 Gene3D G3DSA:3.40.50.1000 1 17 1.2E-33 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 Gene3D G3DSA:3.40.50.1000 91 211 1.2E-33 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 160 2.5E-6 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 3.9E-29 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 PANTHER PTHR18901 1 213 9.5E-48 T 20-04-2016 APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 SUPERFAMILY SSF56784 1 212 3.39E-43 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 PANTHER PTHR18901:SF34 1 213 9.5E-48 T 20-04-2016 APRE_RS07925 c7458225499ea98bce0971bbe1dd1ebd 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 185 1.9E-8 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 SUPERFAMILY SSF53697 87 236 3.34E-18 T 20-04-2016 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 Gene3D G3DSA:1.10.10.10 3 63 2.0E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 PANTHER PTHR30514:SF1 1 245 1.2E-22 T 20-04-2016 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 SUPERFAMILY SSF46689 4 76 5.91E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 75 9.4E-18 T 20-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 Pfam PF01380 SIS domain 112 233 9.6E-16 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 Gene3D G3DSA:3.40.50.10490 64 236 9.0E-20 T 20-04-2016 APRE_RS02420 93f946520e47bc75632a2c7893afdca4 249 PANTHER PTHR30514 1 245 1.2E-22 T 20-04-2016 APRE_RS04835 f605826286b9acac806ca38af4746daf 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 7 144 6.8E-49 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APRE_RS04835 f605826286b9acac806ca38af4746daf 144 SUPERFAMILY SSF51283 13 144 9.29E-47 T 20-04-2016 IPR029054 dUTPase-like APRE_RS04835 f605826286b9acac806ca38af4746daf 144 Gene3D G3DSA:2.70.40.10 11 144 6.8E-52 T 20-04-2016 IPR029054 dUTPase-like APRE_RS04835 f605826286b9acac806ca38af4746daf 144 Pfam PF00692 dUTPase 12 143 7.3E-32 T 20-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APRE_RS04835 f605826286b9acac806ca38af4746daf 144 PANTHER PTHR11241 1 144 1.5E-46 T 20-04-2016 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 SUPERFAMILY SSF48179 276 372 8.16E-30 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 PANTHER PTHR11374:SF17 83 473 4.7E-225 T 20-04-2016 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 SUPERFAMILY SSF51735 84 279 6.49E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 PIRSF PIRSF000124 83 491 1.3E-128 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 SUPERFAMILY SSF52413 397 491 6.02E-26 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 84 478 3.6E-91 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 SMART SM00984 402 490 1.8E-16 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 PANTHER PTHR11374 83 473 4.7E-225 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 84 250 5.2E-29 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Gene3D G3DSA:1.10.260.40 12 82 6.5E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 SMART SM00530 12 67 3.6E-8 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Gene3D G3DSA:1.10.1040.10 283 369 3.6E-35 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 403 478 6.3E-8 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Gene3D G3DSA:3.40.50.720 84 282 9.6E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 PIRSF PIRSF500134 83 446 9.7E-118 T 20-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Gene3D G3DSA:3.40.50.720 370 491 4.7E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 277 366 1.5E-26 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 Pfam PF01381 Helix-turn-helix 16 61 2.5E-9 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS06380 04a0821d71d10069c0596c2b309df4ef 491 SUPERFAMILY SSF47413 7 72 6.17E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 PANTHER PTHR10642 1 191 1.6E-26 T 20-04-2016 APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 SUPERFAMILY SSF55658 1 46 2.2E-14 T 20-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 Pfam PF01693 Caulimovirus viroplasmin 2 45 4.7E-20 T 20-04-2016 IPR011320 Ribonuclease H1, N-terminal APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 SUPERFAMILY SSF53098 59 191 3.16E-26 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 Gene3D G3DSA:3.30.420.10 58 191 2.2E-21 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 Pfam PF00075 RNase H 58 191 2.6E-13 T 20-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APRE_RS07880 c4f1291e73c47e70bac52ea97408180c 194 Gene3D G3DSA:3.40.970.10 1 48 5.8E-23 T 20-04-2016 IPR011320 Ribonuclease H1, N-terminal APRE_RS06245 93f92d32c2978bba442a36c906a44e0a 263 Gene3D G3DSA:1.10.3720.10 8 257 5.8E-45 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06245 93f92d32c2978bba442a36c906a44e0a 263 PANTHER PTHR30193 8 263 5.3E-82 T 20-04-2016 APRE_RS06245 93f92d32c2978bba442a36c906a44e0a 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 254 3.0E-13 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06245 93f92d32c2978bba442a36c906a44e0a 263 SUPERFAMILY SSF161098 2 256 1.57E-48 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06245 93f92d32c2978bba442a36c906a44e0a 263 PANTHER PTHR30193:SF10 8 263 5.3E-82 T 20-04-2016 APRE_RS02465 5602d9a6ad1687cd4a4614459386b499 309 PANTHER PTHR30465 1 305 2.0E-123 T 20-04-2016 APRE_RS02465 5602d9a6ad1687cd4a4614459386b499 309 SUPERFAMILY SSF161098 92 290 1.27E-21 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02465 5602d9a6ad1687cd4a4614459386b499 309 Gene3D G3DSA:1.10.3720.10 94 300 5.4E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02465 5602d9a6ad1687cd4a4614459386b499 309 PANTHER PTHR30465:SF74 1 305 2.0E-123 T 20-04-2016 APRE_RS02465 5602d9a6ad1687cd4a4614459386b499 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 303 2.5E-42 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 PANTHER PTHR22778:SF16 1 160 5.2E-29 T 20-04-2016 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 SUPERFAMILY SSF53597 2 160 1.31E-45 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 PANTHER PTHR22778 1 160 5.2E-29 T 20-04-2016 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 Gene3D G3DSA:3.40.430.10 1 161 1.5E-50 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 PRINTS PR00070 Dihydrofolate reductase signature 12 22 4.2E-10 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 PRINTS PR00070 Dihydrofolate reductase signature 26 34 4.2E-10 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 PRINTS PR00070 Dihydrofolate reductase signature 39 50 4.2E-10 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 PRINTS PR00070 Dihydrofolate reductase signature 91 105 4.2E-10 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APRE_RS08325 16292af390b233a90b45fa0f77e57095 164 Pfam PF00186 Dihydrofolate reductase 2 158 4.3E-47 T 20-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APRE_RS06290 7af1022e99fe91e03f9db11be38e51cb 98 SMART SM00450 4 98 4.8E-16 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS06290 7af1022e99fe91e03f9db11be38e51cb 98 Pfam PF00581 Rhodanese-like domain 9 88 1.9E-15 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS06290 7af1022e99fe91e03f9db11be38e51cb 98 Gene3D G3DSA:3.40.250.10 4 87 3.5E-24 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS06290 7af1022e99fe91e03f9db11be38e51cb 98 SUPERFAMILY SSF52821 4 85 1.3E-25 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS07630 e1ffedb4017396eb92c984fc6e651c24 316 PANTHER PTHR33393:SF5 112 280 3.6E-21 T 20-04-2016 APRE_RS07630 e1ffedb4017396eb92c984fc6e651c24 316 PANTHER PTHR33393 112 280 3.6E-21 T 20-04-2016 APRE_RS07630 e1ffedb4017396eb92c984fc6e651c24 316 Pfam PF04203 Sortase family 117 242 4.7E-23 T 20-04-2016 IPR005754 Sortase family APRE_RS07630 e1ffedb4017396eb92c984fc6e651c24 316 TIGRFAM TIGR01076 sortase_fam: sortase 115 249 9.9E-58 T 20-04-2016 IPR005754 Sortase family APRE_RS07630 e1ffedb4017396eb92c984fc6e651c24 316 SUPERFAMILY SSF63817 103 246 2.22E-45 T 20-04-2016 IPR023365 Sortase domain APRE_RS07630 e1ffedb4017396eb92c984fc6e651c24 316 Gene3D G3DSA:2.40.260.10 111 245 3.8E-49 T 20-04-2016 IPR023365 Sortase domain APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 3 421 23.986 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 SUPERFAMILY SSF53697 18 425 2.83E-124 T 20-04-2016 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 Pfam PF00342 Phosphoglucose isomerase 69 411 1.1E-21 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PANTHER PTHR11469 45 424 9.8E-125 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 280 5.8E-22 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PRINTS PR00662 Glucose-6-phosphate isomerase signature 362 380 5.8E-22 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PRINTS PR00662 Glucose-6-phosphate isomerase signature 185 203 5.8E-22 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PRINTS PR00662 Glucose-6-phosphate isomerase signature 380 394 5.8E-22 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PRINTS PR00662 Glucose-6-phosphate isomerase signature 69 88 5.8E-22 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 407 5.8E-22 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 Gene3D G3DSA:3.40.50.10490 187 403 5.3E-88 T 20-04-2016 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 189 202 - T 20-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 394 411 - T 20-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS08485 74676a13bfe901d181fca55f83d33523 426 Gene3D G3DSA:3.40.50.10490 62 186 4.9E-26 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 3.8E-22 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 3.8E-22 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.8E-22 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.8E-22 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 3.8E-22 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 297 1.4E-32 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 Gene3D G3DSA:3.40.50.720 1 166 1.3E-30 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 248 262 2.3E-19 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 125 134 2.3E-19 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 2.3E-19 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.3E-19 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 2.3E-19 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 Gene3D G3DSA:3.50.50.60 167 240 6.0E-12 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PANTHER PTHR22912 1 378 8.6E-126 T 20-04-2016 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 SUPERFAMILY SSF51905 4 323 5.04E-41 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 Gene3D G3DSA:3.50.50.60 241 324 4.6E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07645 1d420521b0bebeb47f6f7ca088fde24c 419 PANTHER PTHR22912:SF141 1 378 8.6E-126 T 20-04-2016 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PANTHER PTHR11739:SF4 66 449 3.0E-109 T 20-04-2016 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PRINTS PR00143 Citrate synthase signature 403 417 9.54E-30 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PRINTS PR00143 Citrate synthase signature 253 281 9.54E-30 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PRINTS PR00143 Citrate synthase signature 230 245 9.54E-30 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PRINTS PR00143 Citrate synthase signature 174 187 9.54E-30 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PRINTS PR00143 Citrate synthase signature 383 399 9.54E-30 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 Pfam PF00285 Citrate synthase, C-terminal domain 42 433 8.2E-109 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 SUPERFAMILY SSF48256 11 438 3.27E-90 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 Gene3D G3DSA:1.10.580.10 18 332 7.8E-78 T 20-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APRE_RS05610 bdc36c2b026defa8c00b48709a49fe2a 450 PANTHER PTHR11739 66 449 3.0E-109 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APRE_RS07390 376f24ea69d8ac7b261861cf8d97936e 162 Pfam PF01967 MoaC family 15 150 3.6E-53 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APRE_RS07390 376f24ea69d8ac7b261861cf8d97936e 162 SUPERFAMILY SSF55040 11 155 1.07E-58 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APRE_RS07390 376f24ea69d8ac7b261861cf8d97936e 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 34.476 T 20-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 APRE_RS07390 376f24ea69d8ac7b261861cf8d97936e 162 Gene3D G3DSA:3.30.70.640 3 158 8.1E-68 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APRE_RS07390 376f24ea69d8ac7b261861cf8d97936e 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.5E-60 T 20-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 APRE_RS07390 376f24ea69d8ac7b261861cf8d97936e 162 PANTHER PTHR22960 1 158 3.7E-91 T 20-04-2016 APRE_RS04675 d77e41e7f1fab6ea40627f07afe0436d 138 PIRSF PIRSF004923 3 136 1.7E-19 T 20-04-2016 IPR026268 Protein RseC APRE_RS04675 d77e41e7f1fab6ea40627f07afe0436d 138 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 10 134 1.2E-23 T 20-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC APRE_RS04675 d77e41e7f1fab6ea40627f07afe0436d 138 PANTHER PTHR35867 4 136 1.2E-14 T 20-04-2016 APRE_RS04675 d77e41e7f1fab6ea40627f07afe0436d 138 PANTHER PTHR35867:SF1 4 136 1.2E-14 T 20-04-2016 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PANTHER PTHR10025 27 260 4.8E-30 T 20-04-2016 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 223 239 1.3E-19 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 240 258 1.3E-19 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 140 160 1.3E-19 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 61 88 1.3E-19 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 189 218 1.3E-19 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 Gene3D G3DSA:3.40.192.10 14 126 9.5E-6 T 20-04-2016 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 Gene3D G3DSA:3.40.50.720 127 236 7.9E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 PANTHER PTHR10025:SF5 27 260 4.8E-30 T 20-04-2016 APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 SUPERFAMILY SSF51735 113 257 3.35E-22 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS05760 5ae862be41334a5b7cfa4595831c153e 260 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 113 259 6.2E-32 T 20-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APRE_RS07510 cffe1852d7588a867760c7ecc9b2d6f2 407 PANTHER PTHR21716:SF14 22 401 8.0E-44 T 20-04-2016 APRE_RS07510 cffe1852d7588a867760c7ecc9b2d6f2 407 Pfam PF01594 Domain of unknown function DUF20 20 371 2.2E-47 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APRE_RS07510 cffe1852d7588a867760c7ecc9b2d6f2 407 PANTHER PTHR21716 22 401 8.0E-44 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 SUPERFAMILY SSF46785 7 98 9.3E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 PANTHER PTHR33154 13 99 1.6E-25 T 20-04-2016 APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 6.0E-14 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 6.0E-14 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 50 6.0E-14 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 6.0E-14 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 SMART SM00418 18 96 1.4E-27 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 Gene3D G3DSA:1.10.10.10 4 100 1.2E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07235 d94d1ead2b7fc4cbe46618e1a1b86f63 100 Pfam PF01022 Bacterial regulatory protein, arsR family 25 71 1.2E-14 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 Gene3D G3DSA:3.30.70.20 115 153 4.8E-12 T 20-04-2016 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 Gene3D G3DSA:3.30.70.20 154 198 6.5E-16 T 20-04-2016 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 SUPERFAMILY SSF53920 195 488 1.7E-67 T 20-04-2016 IPR009016 Iron hydrogenase APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 PANTHER PTHR11615:SF158 143 493 2.5E-89 T 20-04-2016 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 Gene3D G3DSA:3.40.50.1780 199 253 8.0E-40 T 20-04-2016 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 Gene3D G3DSA:3.40.50.1780 298 412 8.0E-40 T 20-04-2016 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 TIGRFAM TIGR04105 FeFe_hydrog_B1: [FeFe] hydrogenase, group B1/B3 7 468 6.2E-178 T 20-04-2016 IPR027631 [FeFe] hydrogenase, group B1/B3 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 PANTHER PTHR11615 143 493 2.5E-89 T 20-04-2016 APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 Pfam PF12838 4Fe-4S dicluster domain 149 210 1.6E-10 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 229 464 8.4E-56 T 20-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal APRE_RS07045 cc837f1ee7c0aa694cc89685876d85f4 508 SUPERFAMILY SSF54862 143 222 1.15E-18 T 20-04-2016 APRE_RS06835 6442750ba79832b99248dc586270f207 365 SUPERFAMILY SSF48452 147 346 1.19E-21 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 PANTHER PTHR23083 100 359 1.6E-25 T 20-04-2016 APRE_RS06835 6442750ba79832b99248dc586270f207 365 Gene3D G3DSA:1.25.40.10 261 361 1.2E-15 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 Pfam PF13181 Tetratricopeptide repeat 248 272 0.0099 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 SMART SM00028 167 200 7.8E-4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 SMART SM00028 282 315 36.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 SMART SM00028 248 281 0.0075 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 SMART SM00028 316 349 270.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 Gene3D G3DSA:1.25.40.10 212 260 6.8E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 Gene3D G3DSA:1.25.40.10 95 196 4.5E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS06835 6442750ba79832b99248dc586270f207 365 Pfam PF07719 Tetratricopeptide repeat 167 195 8.3E-7 T 20-04-2016 IPR013105 Tetratricopeptide repeat 2 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Gene3D G3DSA:2.60.40.10 4318 4365 5.0E-5 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Gene3D G3DSA:2.60.40.10 4733 4797 3.1E-6 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 SUPERFAMILY SSF49478 4320 4367 1.61E-6 T 20-04-2016 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 PANTHER PTHR36108 4728 4793 1.1E-13 T 20-04-2016 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 SUPERFAMILY SSF49478 4733 4795 2.9E-7 T 20-04-2016 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 SUPERFAMILY SSF49401 3928 4063 1.33E-18 T 20-04-2016 IPR008966 Adhesion domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 SUPERFAMILY SSF49478 3828 3892 9.02E-5 T 20-04-2016 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Pfam PF05738 Cna protein B-type domain 3838 3893 4.7E-8 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Pfam PF05738 Cna protein B-type domain 4741 4798 9.5E-15 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Pfam PF05738 Cna protein B-type domain 1687 1731 2.1E-7 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Pfam PF05738 Cna protein B-type domain 3389 3430 5.1E-6 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Pfam PF05738 Cna protein B-type domain 4323 4369 2.1E-8 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Pfam PF05738 Cna protein B-type domain 4421 4495 8.7E-11 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 SUPERFAMILY SSF49478 4414 4484 5.1E-6 T 20-04-2016 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 PANTHER PTHR36108:SF4 4728 4793 1.1E-13 T 20-04-2016 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Gene3D G3DSA:2.60.40.1280 3928 4092 4.2E-28 T 20-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 Gene3D G3DSA:2.60.40.1280 591 705 5.9E-11 T 20-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 APRE_RS07470 002f38c30dc3d7ead2b3b593f63feccf 4881 SUPERFAMILY SSF117074 1681 1722 7.59E-5 T 20-04-2016 APRE_RS05440 b8e8e2240b508478c449aa187b5381d5 590 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 268 565 6.7E-80 T 20-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal APRE_RS05440 b8e8e2240b508478c449aa187b5381d5 590 PANTHER PTHR34697:SF2 68 589 1.1E-97 T 20-04-2016 APRE_RS05440 b8e8e2240b508478c449aa187b5381d5 590 SUPERFAMILY SSF55729 383 564 3.44E-11 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS05440 b8e8e2240b508478c449aa187b5381d5 590 PANTHER PTHR34697 68 589 1.1E-97 T 20-04-2016 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 2 285 1.2E-118 T 20-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 86 - T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 132 143 - T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 1.3E-100 T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 PIRSF PIRSF001359 1 286 3.3E-113 T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 284 6.2E-98 T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 Gene3D G3DSA:3.20.20.70 1 286 7.0E-104 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 PANTHER PTHR30304 2 286 1.9E-81 T 20-04-2016 APRE_RS03875 4eae44a22b2c3d3c4055ff0ffb27440f 287 SUPERFAMILY SSF51569 3 286 1.15E-96 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 SUPERFAMILY SSF47917 444 551 2.22E-17 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 SMART SM00382 221 411 1.8E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 582 46.12 T 20-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 PANTHER PTHR15184 181 582 3.1E-234 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 PANTHER PTHR15184 4 92 3.1E-234 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 PANTHER PTHR15184 130 135 3.1E-234 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 209 430 1.2E-94 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 83 197 3.2E-37 T 20-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 SUPERFAMILY SSF50615 5 70 1.02E-6 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 67 1.9E-9 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Gene3D G3DSA:1.10.1140.10 441 526 3.2E-13 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 SUPERFAMILY SSF51230 115 167 1.03E-5 T 20-04-2016 IPR011053 Single hybrid motif APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Gene3D G3DSA:3.40.50.300 71 85 9.7E-103 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 Gene3D G3DSA:3.40.50.300 172 430 9.7E-103 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 PANTHER PTHR15184:SF7 181 582 3.1E-234 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 PANTHER PTHR15184:SF7 4 92 3.1E-234 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 PANTHER PTHR15184:SF7 130 135 3.1E-234 T 20-04-2016 APRE_RS05165 acdd6aeb40088538bfa4480e7ec30af3 582 SUPERFAMILY SSF52540 179 435 2.58E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 SUPERFAMILY SSF53927 5 143 2.37E-35 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 PANTHER PTHR11079:SF10 4 210 5.1E-52 T 20-04-2016 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 PANTHER PTHR11079:SF10 248 263 5.1E-52 T 20-04-2016 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 144 350 5.6E-56 T 20-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 348 2.5E-97 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 2.7E-15 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 SUPERFAMILY SSF53597 145 349 2.72E-58 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 Pfam PF01872 RibD C-terminal domain 145 347 1.5E-46 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 PANTHER PTHR11079 4 210 5.1E-52 T 20-04-2016 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 PANTHER PTHR11079 248 263 5.1E-52 T 20-04-2016 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 Gene3D G3DSA:3.40.430.10 127 354 7.3E-74 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 Gene3D G3DSA:3.40.140.10 4 126 3.3E-25 T 20-04-2016 APRE_RS05915 16e424acd27150c461b7aa26d131e864 357 PIRSF PIRSF006769 1 354 1.1E-115 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 PANTHER PTHR30073 6 336 3.1E-178 T 20-04-2016 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 PANTHER PTHR30073:SF5 6 336 3.1E-178 T 20-04-2016 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 PIRSF PIRSF001555 8 336 1.2E-146 T 20-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 Gene3D G3DSA:3.30.930.10 15 331 5.9E-147 T 20-04-2016 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 12 332 46.552 T 20-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 SUPERFAMILY SSF55681 18 327 6.89E-89 T 20-04-2016 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 21 329 6.4E-103 T 20-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APRE_RS07415 442d197ebb5422d5acc46e53932912e2 336 Pfam PF03590 Aspartate-ammonia ligase 22 246 2.5E-102 T 20-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Gene3D G3DSA:2.60.40.920 933 1008 5.0E-4 T 20-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 SMART SM00645 115 335 4.3E-8 T 20-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Gene3D G3DSA:2.60.40.1080 515 595 2.4E-13 T 20-04-2016 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Pfam PF00581 Rhodanese-like domain 1241 1329 7.2E-6 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Gene3D G3DSA:3.40.250.10 1236 1331 3.0E-12 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 PANTHER PTHR12411:SF359 118 399 1.2E-46 T 20-04-2016 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 SUPERFAMILY SSF49373 515 595 9.02E-11 T 20-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 SUPERFAMILY SSF54001 116 323 1.12E-40 T 20-04-2016 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 PANTHER PTHR12411 118 399 1.2E-46 T 20-04-2016 IPR013128 Peptidase C1A GO:0008234 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 132 143 - T 20-04-2016 IPR000169 Cysteine peptidase, cysteine active site APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 SMART SM00450 1239 1335 2.3E-5 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Gene3D G3DSA:3.90.70.10 118 330 4.2E-38 T 20-04-2016 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Pfam PF00112 Papain family cysteine protease 118 325 2.5E-24 T 20-04-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 SUPERFAMILY SSF52821 1229 1331 1.65E-11 T 20-04-2016 IPR001763 Rhodanese-like domain APRE_RS02955 17d9271fd5784303843d1cbebf4e5a7c 2353 Pfam PF02368 Bacterial Ig-like domain (group 2) 515 587 5.6E-9 T 20-04-2016 IPR003343 Bacterial Ig-like, group 2 APRE_RS08505 10f47c412cb59ce56638631e000dd1b0 453 PIRSF PIRSF006603 2 453 9.8E-98 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS08505 10f47c412cb59ce56638631e000dd1b0 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 420 1.4E-62 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS08505 10f47c412cb59ce56638631e000dd1b0 453 Pfam PF01554 MatE 27 187 4.3E-29 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS08505 10f47c412cb59ce56638631e000dd1b0 453 Pfam PF01554 MatE 252 405 1.7E-20 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS08505 10f47c412cb59ce56638631e000dd1b0 453 PANTHER PTHR11206:SF132 7 451 2.1E-109 T 20-04-2016 APRE_RS08505 10f47c412cb59ce56638631e000dd1b0 453 PANTHER PTHR11206 7 451 2.1E-109 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 SUPERFAMILY SSF56784 377 606 7.56E-44 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 SUPERFAMILY SSF56784 320 340 7.56E-44 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 Pfam PF00122 E1-E2 ATPase 92 313 3.5E-60 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 Gene3D G3DSA:3.40.50.1000 294 338 5.2E-38 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 Gene3D G3DSA:3.40.50.1000 425 571 5.2E-38 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 477 493 2.6E-6 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 505 521 2.6E-6 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 71 610 3.4E-137 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 Gene3D G3DSA:2.70.150.10 71 222 4.9E-24 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 71 607 8.4E-155 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 SUPERFAMILY SSF81653 129 221 9.02E-21 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PANTHER PTHR24093:SF210 16 608 7.6E-161 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 524 5.3E-20 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 171 185 5.3E-20 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 541 5.3E-20 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 322 336 5.3E-20 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 PANTHER PTHR24093 16 608 7.6E-161 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 SUPERFAMILY SSF81665 71 124 5.62E-15 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 SUPERFAMILY SSF81665 222 316 5.62E-15 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 324 330 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 Pfam PF00702 haloacid dehalogenase-like hydrolase 320 519 4.6E-27 T 20-04-2016 APRE_RS07245 3ea1722b7c4eafa99e3988e45bfe8bd1 613 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 93 590 1.2E-69 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 Gene3D G3DSA:3.90.400.10 105 169 2.9E-27 T 20-04-2016 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 Gene3D G3DSA:3.20.20.80 2 104 2.9E-119 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 Gene3D G3DSA:3.20.20.80 170 462 2.9E-119 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 SUPERFAMILY SSF51011 465 535 1.2E-11 T 20-04-2016 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 Pfam PF16657 Maltogenic Amylase, C-terminal domain 465 506 2.0E-7 T 20-04-2016 IPR032091 Maltogenic Amylase, C-terminal APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 PANTHER PTHR10357:SF142 440 516 1.4E-224 T 20-04-2016 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 PANTHER PTHR10357:SF142 1 379 1.4E-224 T 20-04-2016 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 PANTHER PTHR10357:SF142 395 407 1.4E-224 T 20-04-2016 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 PANTHER PTHR10357 440 516 1.4E-224 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 PANTHER PTHR10357 1 379 1.4E-224 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 PANTHER PTHR10357 395 407 1.4E-224 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 Gene3D G3DSA:2.60.40.1180 468 535 1.3E-16 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 SMART SM00642 13 402 7.3E-153 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 Pfam PF00128 Alpha amylase, catalytic domain 28 359 1.1E-120 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS01350 fc90e6aae4beb3501faa369816e87f59 536 SUPERFAMILY SSF51445 3 461 5.96E-146 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PANTHER PTHR30603 328 602 1.2E-182 T 20-04-2016 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PANTHER PTHR30603 64 165 1.2E-182 T 20-04-2016 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Pfam PF00140 Sigma-70 factor, region 1.2 117 147 1.5E-14 T 20-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 563 589 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PANTHER PTHR30603:SF0 328 602 1.2E-182 T 20-04-2016 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PANTHER PTHR30603:SF0 64 165 1.2E-182 T 20-04-2016 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Pfam PF04542 Sigma-70 region 2 370 439 5.5E-22 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 SUPERFAMILY SSF88659 500 600 2.62E-27 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 SUPERFAMILY SSF88946 326 440 5.89E-52 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 SUPERFAMILY SSF88946 116 155 5.89E-52 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Gene3D G3DSA:1.10.10.10 443 494 2.5E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 366 602 1.5E-120 T 20-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 366 591 7.3E-39 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Pfam PF04539 Sigma-70 region 3 449 524 1.8E-29 T 20-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 394 407 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 602 31.251 T 20-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 SUPERFAMILY SSF88659 443 517 3.71E-22 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PRINTS PR00046 Major sigma-70 factor signature 563 578 8.2E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PRINTS PR00046 Major sigma-70 factor signature 394 407 8.2E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PRINTS PR00046 Major sigma-70 factor signature 418 426 8.2E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PRINTS PR00046 Major sigma-70 factor signature 542 554 8.2E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 PRINTS PR00046 Major sigma-70 factor signature 578 589 8.2E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Gene3D G3DSA:1.10.601.10 362 439 2.9E-65 T 20-04-2016 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Gene3D G3DSA:1.10.601.10 99 149 2.9E-65 T 20-04-2016 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Pfam PF04545 Sigma-70, region 4 538 590 6.3E-18 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05780 d3d6fb12009be0088391dd125595b384 602 Gene3D G3DSA:1.10.10.10 532 602 2.6E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 335 506 6.0E-20 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 Gene3D G3DSA:1.10.3720.10 290 506 2.5E-52 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 PANTHER PTHR30614 22 511 7.6E-120 T 20-04-2016 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 SUPERFAMILY SSF53850 1 252 7.25E-49 T 20-04-2016 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 SMART SM00062 28 261 2.1E-27 T 20-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 291 400 1.4E-19 T 20-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 SUPERFAMILY SSF161098 292 491 2.75E-43 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 Gene3D G3DSA:3.40.190.10 25 118 1.9E-32 T 20-04-2016 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 Gene3D G3DSA:3.40.190.10 229 262 1.9E-32 T 20-04-2016 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 261 3.6E-36 T 20-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 PANTHER PTHR30614:SF15 22 511 7.6E-120 T 20-04-2016 APRE_RS07860 93c4689f7847addfd6607a0bac0a0d6f 521 Gene3D G3DSA:3.40.190.10 119 214 6.3E-12 T 20-04-2016 APRE_RS07480 c5e6c08bab68a231d0adce26e92e51f8 143 PANTHER PTHR32145 1 139 4.3E-30 T 20-04-2016 APRE_RS07480 c5e6c08bab68a231d0adce26e92e51f8 143 Pfam PF00258 Flavodoxin 6 124 4.3E-10 T 20-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APRE_RS07480 c5e6c08bab68a231d0adce26e92e51f8 143 SUPERFAMILY SSF52218 3 141 2.02E-30 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS07480 c5e6c08bab68a231d0adce26e92e51f8 143 TIGRFAM TIGR01753 flav_short: flavodoxin 4 139 1.4E-40 T 20-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 APRE_RS07480 c5e6c08bab68a231d0adce26e92e51f8 143 PANTHER PTHR32145:SF19 1 139 4.3E-30 T 20-04-2016 APRE_RS07480 c5e6c08bab68a231d0adce26e92e51f8 143 Gene3D G3DSA:3.40.50.360 4 142 1.3E-38 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 Gene3D G3DSA:1.10.10.10 3 76 1.4E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 SUPERFAMILY SSF53697 94 274 1.17E-35 T 20-04-2016 APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 SUPERFAMILY SSF46689 2 77 1.49E-18 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 6.7E-20 T 20-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 Gene3D G3DSA:3.40.50.10490 106 267 9.0E-35 T 20-04-2016 APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 PANTHER PTHR30514:SF1 6 269 2.9E-54 T 20-04-2016 APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 Pfam PF01380 SIS domain 129 253 6.8E-17 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS07920 42348e4681ecc1360ec374ff0862c140 279 PANTHER PTHR30514 6 269 2.9E-54 T 20-04-2016 APRE_RS03130 14aec3b63c92a96eac549dc697eae7c8 337 Gene3D G3DSA:2.30.42.10 89 189 5.3E-14 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS03130 14aec3b63c92a96eac549dc697eae7c8 337 Pfam PF13180 PDZ domain 125 187 2.8E-6 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS03130 14aec3b63c92a96eac549dc697eae7c8 337 Pfam PF02163 Peptidase family M50 7 324 1.3E-73 T 20-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APRE_RS03130 14aec3b63c92a96eac549dc697eae7c8 337 PANTHER PTHR22939 121 337 1.6E-46 T 20-04-2016 APRE_RS03130 14aec3b63c92a96eac549dc697eae7c8 337 PANTHER PTHR22939:SF78 121 337 1.6E-46 T 20-04-2016 APRE_RS03130 14aec3b63c92a96eac549dc697eae7c8 337 SUPERFAMILY SSF50156 92 187 9.86E-11 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 33 153 6.8E-42 T 20-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 SUPERFAMILY SSF51261 23 176 8.2E-54 T 20-04-2016 IPR011055 Duplicated hybrid motif APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 Gene3D G3DSA:2.70.70.10 24 176 3.7E-58 T 20-04-2016 APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 32 156 2.2E-49 T 20-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 PANTHER PTHR30175 14 128 6.5E-39 T 20-04-2016 APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 PANTHER PTHR30175:SF1 14 128 6.5E-39 T 20-04-2016 APRE_RS01225 dec64cb64034798cd4ab15f7ee61b138 178 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 95 107 - T 20-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 SUPERFAMILY SSF52518 7 259 2.94E-72 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 372 3.1E-16 T 20-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Gene3D G3DSA:3.40.50.920 261 407 3.5E-62 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Gene3D G3DSA:3.30.70.20 671 783 6.8E-22 T 20-04-2016 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 SUPERFAMILY SSF54862 668 833 6.84E-22 T 20-04-2016 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 PANTHER PTHR32154 5 1175 0.0 T 20-04-2016 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Gene3D G3DSA:3.40.920.10 416 623 4.0E-87 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 SUPERFAMILY SSF52518 788 1173 1.23E-125 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 20 248 9.5E-73 T 20-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 SUPERFAMILY SSF52922 261 408 6.42E-46 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Pfam PF12838 4Fe-4S dicluster domain 689 757 2.0E-10 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Gene3D G3DSA:3.40.50.970 789 1174 2.7E-148 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 7 1173 0.0 T 20-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 960 1072 5.5E-8 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Pfam PF10371 Domain of unknown function 626 678 4.3E-21 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Gene3D G3DSA:3.40.50.970 6 259 9.5E-105 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 SUPERFAMILY SSF53323 416 665 8.24E-86 T 20-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Gene3D G3DSA:4.10.780.10 628 668 7.7E-14 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 SMART SM00890 621 679 7.5E-24 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 2.4E-30 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 PANTHER PTHR32154:SF0 5 1175 0.0 T 20-04-2016 APRE_RS05320 c4ab5116639c5f40e14ad0afa6828f63 1175 PIRSF PIRSF000159 2 1175 0.0 T 20-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 SUPERFAMILY SSF51445 3 443 5.62E-139 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 343 351 - T 20-04-2016 IPR018120 Glycoside hydrolase family 1, active site APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 Pfam PF00232 Glycosyl hydrolase family 1 2 443 2.6E-120 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 343 351 9.9E-13 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 409 421 9.9E-13 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 385 402 9.9E-13 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 279 293 9.9E-13 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 364 375 9.9E-13 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PANTHER PTHR10353:SF35 4 439 1.4E-137 T 20-04-2016 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 PANTHER PTHR10353 4 439 1.4E-137 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APRE_RS08120 89ba75bae794a794cd12d23aa5b7c14a 451 Gene3D G3DSA:3.20.20.80 2 444 5.4E-127 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS06750 d1c98439eb9d288ea6e42538f10c08fb 523 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 142 290 7.1E-6 T 20-04-2016 APRE_RS03050 acf342ad6d73688c3d9fbcdae1a1c10e 602 PANTHER PTHR23028:SF53 11 468 6.3E-32 T 20-04-2016 APRE_RS03050 acf342ad6d73688c3d9fbcdae1a1c10e 602 Gene3D G3DSA:3.40.50.1110 532 594 2.1E-6 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS03050 acf342ad6d73688c3d9fbcdae1a1c10e 602 Pfam PF01757 Acyltransferase family 7 338 8.4E-19 T 20-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APRE_RS03050 acf342ad6d73688c3d9fbcdae1a1c10e 602 PANTHER PTHR23028 11 468 6.3E-32 T 20-04-2016 APRE_RS03050 acf342ad6d73688c3d9fbcdae1a1c10e 602 SUPERFAMILY SSF52266 439 595 1.6E-11 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 SUPERFAMILY SSF102114 49 352 7.46E-41 T 20-04-2016 APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 Pfam PF04055 Radical SAM superfamily 95 241 2.0E-9 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 Gene3D G3DSA:3.20.20.70 49 346 1.3E-41 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 277 378 3.5E-22 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 PANTHER PTHR22976:SF2 8 417 2.4E-201 T 20-04-2016 APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 SMART SM00876 277 383 4.1E-20 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 4 470 3.8E-253 T 20-04-2016 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM APRE_RS01500 a5e293c546bce1ea4dee8350c9281547 472 PANTHER PTHR22976 8 417 2.4E-201 T 20-04-2016 APRE_RS08575 79a0bd80ba1a9ab1daf298ccd5e3ccf8 157 PANTHER PTHR33799 1 152 4.8E-40 T 20-04-2016 APRE_RS08575 79a0bd80ba1a9ab1daf298ccd5e3ccf8 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 3.2E-43 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS08575 79a0bd80ba1a9ab1daf298ccd5e3ccf8 157 Gene3D G3DSA:3.40.35.10 3 151 2.2E-46 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS08575 79a0bd80ba1a9ab1daf298ccd5e3ccf8 157 SUPERFAMILY SSF52728 3 151 1.44E-40 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS06475 e5b7fd5e310de3ecd1b5f5d7e323e720 96 PANTHER PTHR34477 1 94 1.5E-26 T 20-04-2016 APRE_RS06475 e5b7fd5e310de3ecd1b5f5d7e323e720 96 Pfam PF01541 GIY-YIG catalytic domain 3 75 1.6E-12 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS06475 e5b7fd5e310de3ecd1b5f5d7e323e720 96 SUPERFAMILY SSF82771 1 90 7.98E-16 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS06475 e5b7fd5e310de3ecd1b5f5d7e323e720 96 Gene3D G3DSA:3.40.1440.10 4 59 2.3E-5 T 20-04-2016 IPR027299 GIY-YIG domain APRE_RS06475 e5b7fd5e310de3ecd1b5f5d7e323e720 96 PANTHER PTHR34477:SF2 1 94 1.5E-26 T 20-04-2016 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 Pfam PF04055 Radical SAM superfamily 100 248 2.5E-13 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 345 433 4.2E-18 T 20-04-2016 IPR023885 4Fe4S-binding SPASM domain APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 Pfam PF13186 Iron-sulfur cluster-binding domain 345 405 2.1E-4 T 20-04-2016 IPR023885 4Fe4S-binding SPASM domain APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 Pfam PF13353 4Fe-4S single cluster domain 102 232 1.0E-12 T 20-04-2016 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 PANTHER PTHR11228:SF21 44 443 2.4E-104 T 20-04-2016 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 2 448 2.8E-223 T 20-04-2016 IPR024025 SCIFF radical SAM maturase APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 PANTHER PTHR11228 44 443 2.4E-104 T 20-04-2016 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 Gene3D G3DSA:3.20.20.70 93 423 1.5E-57 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 101 112 - T 20-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APRE_RS05150 9d68f1f24f0a795b34a53568ec22981e 460 SUPERFAMILY SSF102114 95 414 1.44E-53 T 20-04-2016 APRE_RS02975 d70e9ccc2f77ed587e7ac27d09a28dcd 73 PIRSF PIRSF037246 1 72 9.3E-36 T 20-04-2016 IPR017154 Uncharacterised conserved protein UCP037246 APRE_RS02975 d70e9ccc2f77ed587e7ac27d09a28dcd 73 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 67 2.4E-11 T 20-04-2016 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 PANTHER PTHR39080 2 62 1.2E-13 T 20-04-2016 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 15.915 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.4E-20 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 Pfam PF00830 Ribosomal L28 family 3 58 1.9E-20 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 PANTHER PTHR39080:SF1 2 62 1.2E-13 T 20-04-2016 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 Gene3D G3DSA:4.10.1160.10 19 62 1.9E-21 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS03495 452c26051c81184c33c8b1c6a5c7930e 62 SUPERFAMILY SSF143800 1 61 3.73E-21 T 20-04-2016 APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 Gene3D G3DSA:3.30.1340.10 1 84 3.5E-29 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.2E-26 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.9E-16 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.9E-16 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.9E-16 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 PANTHER PTHR33705 1 85 4.7E-30 T 20-04-2016 APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 20-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 SUPERFAMILY SSF55594 3 86 2.36E-25 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS08400 6ce9af5be6de3b360a47cf9953521781 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.6E-28 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 SUPERFAMILY SSF46689 10 77 2.69E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 Pfam PF01380 SIS domain 117 233 3.7E-18 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 PANTHER PTHR30514:SF1 9 237 2.8E-26 T 20-04-2016 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 Gene3D G3DSA:3.40.50.10490 69 241 6.8E-30 T 20-04-2016 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 78 6.9E-17 T 20-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 SUPERFAMILY SSF53697 89 237 1.44E-27 T 20-04-2016 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 PANTHER PTHR30514 9 237 2.8E-26 T 20-04-2016 APRE_RS00770 ec5ea359b9918d3c977ff484a1d59d03 243 Gene3D G3DSA:1.10.10.10 9 68 8.4E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS03655 e224731d1a89b2f5f7b97d5cf3b60040 377 PANTHER PTHR30477 1 317 1.1E-77 T 20-04-2016 APRE_RS03655 e224731d1a89b2f5f7b97d5cf3b60040 377 Pfam PF00950 ABC 3 transport family 15 281 2.5E-47 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APRE_RS03655 e224731d1a89b2f5f7b97d5cf3b60040 377 PANTHER PTHR30477:SF8 1 317 1.1E-77 T 20-04-2016 APRE_RS03655 e224731d1a89b2f5f7b97d5cf3b60040 377 SUPERFAMILY SSF81345 15 277 1.23E-24 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 SMART SM00533 9 310 6.6E-21 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 779 9.6E-215 T 20-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 PIRSF PIRSF005814 1 781 1.0E-242 T 20-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 PANTHER PTHR11361 28 595 3.5E-204 T 20-04-2016 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 SUPERFAMILY SSF52540 286 508 9.11E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 SUPERFAMILY SSF48334 34 284 4.97E-19 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 Pfam PF00488 MutS domain V 325 505 2.7E-37 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 404 420 - T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 780 20.279 T 20-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 SUPERFAMILY SSF160443 704 778 4.18E-7 T 20-04-2016 IPR002625 Smr domain APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 Gene3D G3DSA:3.40.50.300 288 508 6.2E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 Pfam PF01713 Smr domain 706 780 4.5E-17 T 20-04-2016 IPR002625 Smr domain APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 SMART SM00534 322 507 7.5E-66 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 SMART SM00463 703 781 5.9E-19 T 20-04-2016 IPR002625 Smr domain APRE_RS06850 6b460e42866311c21f09a14cf47d33cd 781 PANTHER PTHR11361:SF14 28 595 3.5E-204 T 20-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 105 0.002 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 3.5E-17 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 SUPERFAMILY SSF48300 5 63 5.89E-15 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 126 9.7E-28 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 SUPERFAMILY SSF54736 57 126 4.19E-23 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 Gene3D G3DSA:1.20.5.710 9 53 3.4E-18 T 20-04-2016 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 1.1E-43 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 127 23.936 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05830 5a777972ec0e6fe6c6d92916cd4177de 127 Gene3D G3DSA:3.30.1390.10 56 126 4.1E-30 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 Pfam PF02390 Putative methyltransferase 37 201 3.2E-39 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 208 26.053 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 24 202 2.6E-43 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 SUPERFAMILY SSF53335 30 203 1.75E-24 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 PANTHER PTHR23417 1 209 1.6E-49 T 20-04-2016 APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 PANTHER PTHR23417:SF14 1 209 1.6E-49 T 20-04-2016 APRE_RS05385 6cde2f571e1e9339f54136947d583a23 209 Gene3D G3DSA:3.40.50.150 42 204 2.4E-11 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 PANTHER PTHR34185:SF1 1 275 1.8E-98 T 20-04-2016 APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 Gene3D G3DSA:3.40.1700.10 114 241 4.5E-55 T 20-04-2016 APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 238 5.2E-47 T 20-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 16 256 9.1E-87 T 20-04-2016 IPR014046 Diadenylate cyclase-like APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 SUPERFAMILY SSF143597 45 242 1.96E-68 T 20-04-2016 APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 PANTHER PTHR34185 1 275 1.8E-98 T 20-04-2016 APRE_RS02000 a10d113ff5adf23ce13a7e83e1ddb8bb 275 PIRSF PIRSF004793 7 269 4.2E-93 T 20-04-2016 IPR014046 Diadenylate cyclase-like APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 Gene3D G3DSA:3.40.1130.10 10 189 3.1E-29 T 20-04-2016 APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 SUPERFAMILY SSF69593 4 192 1.44E-47 T 20-04-2016 APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 19 143 5.6E-31 T 20-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 SMART SM00563 34 146 1.3E-31 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 PANTHER PTHR10434:SF21 1 188 1.0E-48 T 20-04-2016 APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 Pfam PF01553 Acyltransferase 19 143 3.3E-27 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APRE_RS05210 42fd94781a0f6b181eb36ce8c4af427c 200 PANTHER PTHR10434 1 188 1.0E-48 T 20-04-2016 APRE_RS08645 d6cc63390d146f5ba4fc42545ec652f7 183 Pfam PF01991 ATP synthase (E/31 kDa) subunit 10 112 6.8E-7 T 20-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 APRE_RS08645 d6cc63390d146f5ba4fc42545ec652f7 183 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 2 183 10.768 T 20-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 APRE_RS08645 d6cc63390d146f5ba4fc42545ec652f7 183 SUPERFAMILY SSF160527 83 182 3.4E-12 T 20-04-2016 APRE_RS04540 60aa88db523ed9e02d061c0ba2469456 249 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 143 163 - T 20-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APRE_RS04540 60aa88db523ed9e02d061c0ba2469456 249 Pfam PF13616 PPIC-type PPIASE domain 118 204 1.6E-21 T 20-04-2016 APRE_RS04540 60aa88db523ed9e02d061c0ba2469456 249 PANTHER PTHR10657 1 246 3.2E-39 T 20-04-2016 APRE_RS04540 60aa88db523ed9e02d061c0ba2469456 249 Gene3D G3DSA:3.10.50.40 108 228 2.6E-38 T 20-04-2016 APRE_RS04540 60aa88db523ed9e02d061c0ba2469456 249 SUPERFAMILY SSF109998 6 143 1.77E-18 T 20-04-2016 IPR027304 Trigger factor/SurA domain APRE_RS04540 60aa88db523ed9e02d061c0ba2469456 249 SUPERFAMILY SSF54534 95 202 1.24E-27 T 20-04-2016 APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 Gene3D G3DSA:3.20.20.100 1 276 1.8E-45 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 346 357 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 PANTHER PTHR11732 1 312 9.2E-106 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 Gene3D G3DSA:1.10.1060.10 289 372 1.9E-12 T 20-04-2016 APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 SUPERFAMILY SSF51430 1 276 6.42E-56 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 Pfam PF00248 Aldo/keto reductase family 13 266 3.7E-35 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 SUPERFAMILY SSF46548 289 373 1.96E-10 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 PANTHER PTHR11732:SF5 1 312 9.2E-106 T 20-04-2016 APRE_RS02380 d41c6e9dd277b5821fdb65f0f605eae4 374 Pfam PF13534 4Fe-4S dicluster domain 295 360 8.9E-11 T 20-04-2016 APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 SMART SM00471 15 141 3.0E-8 T 20-04-2016 IPR003607 HD/PDEase domain APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 TIGRFAM TIGR00277 HDIG: HDIG domain 17 109 1.8E-10 T 20-04-2016 IPR006675 HDIG domain APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 SUPERFAMILY SSF109604 7 184 4.11E-31 T 20-04-2016 APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 Gene3D G3DSA:1.10.3210.10 5 185 4.3E-53 T 20-04-2016 IPR006674 HD domain APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 14 181 2.2E-36 T 20-04-2016 IPR005249 Conserved hypothetical protein CHP00488 APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 Pfam PF01966 HD domain 19 130 7.0E-19 T 20-04-2016 IPR006674 HD domain APRE_RS04765 010ded64e8e498c9087c5dad7ca21ba8 190 PANTHER PTHR35795 1 183 9.8E-49 T 20-04-2016 APRE_RS07170 eaa2ce065e0130a6ed2e724fd4a68e64 385 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 10 375 2.4E-107 T 20-04-2016 IPR012732 Hydroxymethylpyrimidine transporter CytX APRE_RS07170 eaa2ce065e0130a6ed2e724fd4a68e64 385 PANTHER PTHR30569 1 385 2.9E-35 T 20-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 APRE_RS07170 eaa2ce065e0130a6ed2e724fd4a68e64 385 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 3 330 1.1E-15 T 20-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APRE_RS07170 eaa2ce065e0130a6ed2e724fd4a68e64 385 Gene3D G3DSA:3.40.50.300 217 245 3.1E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 SMART SM01133 21 283 1.6E-19 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 327 155.477 T 20-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 Gene3D G3DSA:3.20.20.70 5 326 2.0E-115 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 SUPERFAMILY SSF51569 7 319 1.79E-56 T 20-04-2016 APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 PANTHER PTHR39340:SF1 1 318 4.0E-100 T 20-04-2016 APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 PANTHER PTHR39340 1 318 4.0E-100 T 20-04-2016 APRE_RS00415 0dd7f65a16c9ee92b58d4eb935505782 327 Pfam PF01791 DeoC/LacD family aldolase 21 282 2.3E-54 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 Gene3D G3DSA:3.40.50.1220 325 366 5.4E-4 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 Gene3D G3DSA:3.40.50.1220 271 290 5.4E-4 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 Gene3D G3DSA:3.40.50.1220 54 86 5.4E-4 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 Gene3D G3DSA:3.40.50.1220 199 228 5.4E-4 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 Pfam PF13289 SIR2-like domain 213 380 9.6E-24 T 20-04-2016 APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 SUPERFAMILY SSF52467 146 226 1.74E-6 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 SUPERFAMILY SSF52467 270 373 1.74E-6 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS01895 8e8b7c757eedd6042859f9aeb680fd38 418 SUPERFAMILY SSF52467 57 88 1.74E-6 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS00275 c754c2b3c972fdd1b75728d76a0c94b7 367 PIRSF PIRSF006078 1 358 2.5E-57 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS00275 c754c2b3c972fdd1b75728d76a0c94b7 367 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 5 309 1.7E-61 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS00275 c754c2b3c972fdd1b75728d76a0c94b7 367 Pfam PF02595 Glycerate kinase family 4 331 1.2E-66 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS00275 c754c2b3c972fdd1b75728d76a0c94b7 367 Gene3D G3DSA:3.90.1510.10 38 267 4.0E-59 T 20-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APRE_RS00275 c754c2b3c972fdd1b75728d76a0c94b7 367 PANTHER PTHR21599 1 331 1.4E-55 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS00275 c754c2b3c972fdd1b75728d76a0c94b7 367 SUPERFAMILY SSF110738 1 327 6.41E-65 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS03390 3cf2de7cbf3de991f964b28c0f178ed9 121 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 2.1E-10 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03390 3cf2de7cbf3de991f964b28c0f178ed9 121 SUPERFAMILY SSF54523 7 71 6.43E-15 T 20-04-2016 APRE_RS03390 3cf2de7cbf3de991f964b28c0f178ed9 121 PANTHER PTHR30093 1 59 9.8E-15 T 20-04-2016 APRE_RS03390 3cf2de7cbf3de991f964b28c0f178ed9 121 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.3E-9 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03390 3cf2de7cbf3de991f964b28c0f178ed9 121 Gene3D G3DSA:3.30.700.10 7 75 1.2E-14 T 20-04-2016 APRE_RS03390 3cf2de7cbf3de991f964b28c0f178ed9 121 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 SUPERFAMILY SSF53955 52 224 4.78E-68 T 20-04-2016 IPR023346 Lysozyme-like domain APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 SUPERFAMILY SSF53955 251 290 4.78E-68 T 20-04-2016 IPR023346 Lysozyme-like domain APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 SUPERFAMILY SSF56601 252 270 1.88E-87 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 SUPERFAMILY SSF56601 301 363 1.88E-87 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 SUPERFAMILY SSF56601 507 878 1.88E-87 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 Pfam PF00905 Penicillin binding protein transpeptidase domain 516 773 2.9E-26 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 Gene3D G3DSA:1.10.3810.10 73 269 1.3E-68 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 PANTHER PTHR32282 508 918 2.9E-158 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 PANTHER PTHR32282 11 226 2.9E-158 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 PANTHER PTHR32282 253 360 2.9E-158 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 Gene3D G3DSA:3.40.710.10 507 866 1.7E-94 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 Gene3D G3DSA:3.40.710.10 270 363 1.7E-94 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 PANTHER PTHR32282:SF0 508 918 2.9E-158 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 PANTHER PTHR32282:SF0 11 226 2.9E-158 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 PANTHER PTHR32282:SF0 253 360 2.9E-158 T 20-04-2016 APRE_RS06170 83265931d07890ece908b8b4bdb75367 985 Pfam PF00912 Transglycosylase 66 237 5.6E-60 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 PANTHER PTHR13847 2 446 7.0E-93 T 20-04-2016 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Pfam PF04324 BFD-like [2Fe-2S] binding domain 401 454 1.0E-14 T 20-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Pfam PF01266 FAD dependent oxidoreductase 3 353 6.8E-60 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Gene3D G3DSA:3.30.9.10 85 138 1.8E-5 T 20-04-2016 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Gene3D G3DSA:3.30.9.10 218 234 1.8E-5 T 20-04-2016 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 PANTHER PTHR13847:SF150 2 446 7.0E-93 T 20-04-2016 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 SUPERFAMILY SSF51905 1 221 3.11E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 SUPERFAMILY SSF51905 316 372 3.11E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Gene3D G3DSA:3.50.50.60 1 82 6.2E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Gene3D G3DSA:3.50.50.60 316 364 6.2E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01605 f11989424eb54fd8da0dd05fdce14342 491 Gene3D G3DSA:3.50.50.60 139 217 6.2E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 454 51.322 T 20-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 SUPERFAMILY SSF52540 77 352 6.76E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 338 347 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 SUPERFAMILY SSF47917 359 414 1.18E-5 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 PANTHER PTHR15184 1 451 8.3E-221 T 20-04-2016 APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 347 8.3E-64 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 Gene3D G3DSA:1.10.1140.10 361 415 5.6E-5 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 Gene3D G3DSA:3.40.50.300 75 352 4.3E-93 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05160 0e843521d227f60212208a59ce283ac1 454 PANTHER PTHR15184:SF11 1 451 8.3E-221 T 20-04-2016 APRE_RS01675 ccfb96dbb67645516c20b0971f68314d 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 2.7E-57 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS01675 ccfb96dbb67645516c20b0971f68314d 451 PANTHER PTHR11206 10 443 1.3E-101 T 20-04-2016 APRE_RS01675 ccfb96dbb67645516c20b0971f68314d 451 PIRSF PIRSF006603 1 446 2.8E-70 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS01675 ccfb96dbb67645516c20b0971f68314d 451 Pfam PF01554 MatE 15 176 3.2E-31 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS01675 ccfb96dbb67645516c20b0971f68314d 451 Pfam PF01554 MatE 249 398 1.0E-13 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS01675 ccfb96dbb67645516c20b0971f68314d 451 PANTHER PTHR11206:SF132 10 443 1.3E-101 T 20-04-2016 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 28.414 T 20-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 Gene3D G3DSA:2.10.150.10 1 124 1.8E-51 T 20-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 PANTHER PTHR33569:SF1 1 124 1.4E-52 T 20-04-2016 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 2.8E-41 T 20-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 PANTHER PTHR33569 1 124 1.4E-52 T 20-04-2016 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 SUPERFAMILY SSF51278 1 124 2.22E-48 T 20-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS03760 e0e8d6ec2eebc14c49d22328edd7101b 127 Pfam PF00699 Urease beta subunit 3 99 5.5E-41 T 20-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 SUPERFAMILY SSF46785 9 124 3.06E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 PANTHER PTHR34134 10 134 4.0E-27 T 20-04-2016 APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 Pfam PF03965 Penicillinase repressor 10 123 9.5E-37 T 20-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 Gene3D G3DSA:1.10.10.10 8 82 7.9E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 PIRSF PIRSF019455 4 135 3.7E-40 T 20-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 PANTHER PTHR34134:SF1 10 134 4.0E-27 T 20-04-2016 APRE_RS02960 e5b1c6faad0e33ecc43a3783c52adf3d 149 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 10 137 5.4E-58 T 20-04-2016 IPR014071 Copper transport repressor CopY/TcrY APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 PANTHER PTHR10617 335 399 3.7E-88 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 PANTHER PTHR10617 1 293 3.7E-88 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 SUPERFAMILY SSF160996 191 345 3.79E-25 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 Pfam PF03486 HI0933-like protein 4 396 7.5E-117 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 Gene3D G3DSA:2.40.30.10 190 277 2.8E-4 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 PANTHER PTHR10617:SF103 335 399 3.7E-88 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 PANTHER PTHR10617:SF103 1 293 3.7E-88 T 20-04-2016 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 SUPERFAMILY SSF51905 3 188 8.87E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 SUPERFAMILY SSF51905 342 399 8.87E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 Gene3D G3DSA:3.50.50.60 344 400 8.2E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 Gene3D G3DSA:3.50.50.60 3 186 8.2E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS05220 8ef789ef935e10489267fca4bcdf83b7 403 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 396 2.1E-123 T 20-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SMART SM00955 245 571 1.1E-154 T 20-04-2016 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SUPERFAMILY SSF50249 620 697 7.01E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 Pfam PF08206 Ribonuclease B OB domain 71 130 1.2E-13 T 20-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 Pfam PF08206 Ribonuclease B OB domain 145 198 3.0E-13 T 20-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 Pfam PF00575 S1 RNA binding domain 618 696 3.2E-6 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 Gene3D G3DSA:2.40.50.140 620 698 7.5E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SMART SM00316 618 699 7.2E-7 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 698 3.9E-234 T 20-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 PANTHER PTHR23355:SF9 79 698 7.2E-182 T 20-04-2016 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SUPERFAMILY SSF50249 57 133 2.86E-11 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 PANTHER PTHR23355 79 698 7.2E-182 T 20-04-2016 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SUPERFAMILY SSF50249 124 222 2.73E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 Hamap MF_01895 Ribonuclease R [rnr]. 21 699 51.642 T 20-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 60 698 5.9E-188 T 20-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 Pfam PF00773 RNB domain 245 570 1.9E-109 T 20-04-2016 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 ProSitePatterns PS01175 Ribonuclease II family signature. 538 562 - T 20-04-2016 IPR022966 Ribonuclease II/R, conserved site APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SMART SM00357 70 129 0.46 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SMART SM00357 138 199 1.6E-5 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APRE_RS03980 f0767ff346efe26246cf1f84626654e9 708 SUPERFAMILY SSF50249 206 616 9.14E-131 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 SUPERFAMILY SSF53623 108 315 1.44E-48 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Gene3D G3DSA:3.40.1390.10 21 95 3.7E-19 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 453 4.4E-118 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 SUPERFAMILY SSF53244 318 454 5.49E-29 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 395 2.1E-7 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Pfam PF08245 Mur ligase middle domain 113 289 3.1E-45 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 PANTHER PTHR23135:SF3 13 459 1.3E-139 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 SUPERFAMILY SSF63418 1 103 4.84E-21 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Gene3D G3DSA:3.40.1190.10 96 314 6.9E-61 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 PANTHER PTHR23135 13 459 1.3E-139 T 20-04-2016 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Pfam PF01225 Mur ligase family, catalytic domain 27 102 9.9E-9 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 456 31.511 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02320 9dcf8a6847ef89930b7ca9f57e343d3f 460 Gene3D G3DSA:3.90.190.20 317 456 1.9E-35 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 Gene3D G3DSA:3.40.50.300 231 355 2.9E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 SMART SM00487 20 231 5.9E-33 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 Pfam PF00270 DEAD/DEAH box helicase 25 194 3.6E-26 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031 24 207 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031 223 365 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031 384 509 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031 639 681 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 SUPERFAMILY SSF52540 34 353 1.56E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 Pfam PF00271 Helicase conserved C-terminal domain 242 350 3.0E-12 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 Gene3D G3DSA:3.40.50.300 17 211 1.4E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031:SF122 24 207 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031:SF122 223 365 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031:SF122 384 509 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 PANTHER PTHR24031:SF122 639 681 1.9E-51 T 20-04-2016 APRE_RS06205 059e2a98c8bc5b0b9f254ef25e58d1d2 696 SMART SM00490 262 351 1.2E-8 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS03170 9b5f1a2114516e9918ff339eaf8a8457 97 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 79 3.8E-5 T 20-04-2016 IPR000361 FeS cluster biogenesis APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 8 231 1.2E-83 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 8 232 38.159 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 PANTHER PTHR10291 8 231 1.2E-110 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 177 194 - T 20-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 SUPERFAMILY SSF64005 7 226 1.96E-85 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 Gene3D G3DSA:3.40.1180.10 4 232 6.1E-93 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APRE_RS03120 345d1ff1677befb32ea8ad6358ba6342 234 Pfam PF01255 Putative undecaprenyl diphosphate synthase 15 231 5.0E-80 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SUPERFAMILY SSF50249 611 695 8.95E-25 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SMART SM00316 623 694 2.6E-24 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SUPERFAMILY SSF158832 1 308 1.07E-89 T 20-04-2016 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SUPERFAMILY SSF53098 310 456 2.43E-47 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 PANTHER PTHR10724 2 699 7.9E-267 T 20-04-2016 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Pfam PF16921 Tex protein YqgF-like domain 315 438 3.3E-51 T 20-04-2016 IPR032639 Tex protein, YqgF-like domain APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Gene3D G3DSA:1.10.3500.10 108 310 1.7E-72 T 20-04-2016 IPR023323 Tex-like domain APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Gene3D G3DSA:1.10.3500.10 438 484 1.7E-72 T 20-04-2016 IPR023323 Tex-like domain APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 PANTHER PTHR10724:SF1 2 699 7.9E-267 T 20-04-2016 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Gene3D G3DSA:3.30.420.140 314 437 2.5E-50 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Pfam PF09371 Tex-like protein N-terminal domain 7 180 7.0E-56 T 20-04-2016 IPR018974 Tex-like protein, N-terminal APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Gene3D G3DSA:1.10.10.650 2 107 1.5E-38 T 20-04-2016 IPR023319 Tex-like protein, HTH domain APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SUPERFAMILY SSF47781 547 606 6.67E-15 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Gene3D G3DSA:2.40.50.140 619 696 5.2E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SUPERFAMILY SSF47781 457 544 9.56E-17 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Gene3D G3DSA:1.10.150.310 486 604 1.2E-33 T 20-04-2016 IPR023097 Tex RuvX-like domain APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Pfam PF12836 Helix-hairpin-helix motif 478 541 8.9E-17 T 20-04-2016 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 SMART SM00732 314 411 2.6E-31 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APRE_RS03865 109a13fdb5b1f1cc12d37b41ad088e98 699 Pfam PF00575 S1 RNA binding domain 622 694 3.5E-20 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 SUPERFAMILY SSF55174 9 59 2.86E-9 T 20-04-2016 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 PANTHER PTHR11079:SF73 1 295 1.3E-85 T 20-04-2016 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 PANTHER PTHR11079 1 295 1.3E-85 T 20-04-2016 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 SMART SM00363 9 69 5.1E-6 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 289 9.6E-76 T 20-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 Pfam PF01479 S4 domain 10 55 3.6E-8 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 SUPERFAMILY SSF55120 66 296 4.73E-64 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 Pfam PF00849 RNA pseudouridylate synthase 82 237 1.7E-32 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS03065 28edfddb09f85079c31a4cbba017d098 305 Gene3D G3DSA:3.10.290.10 9 60 7.4E-15 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS08445 99b23ffaa0f617496fb6e7a9475566eb 146 Pfam PF04397 LytTr DNA-binding domain 49 144 1.5E-25 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APRE_RS08445 99b23ffaa0f617496fb6e7a9475566eb 146 SMART SM00850 48 145 5.0E-32 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APRE_RS08445 99b23ffaa0f617496fb6e7a9475566eb 146 Gene3D G3DSA:2.40.50.40 40 108 4.4E-17 T 20-04-2016 APRE_RS08445 99b23ffaa0f617496fb6e7a9475566eb 146 PANTHER PTHR37299 1 146 9.3E-23 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Pfam PF00958 GMP synthase C terminal domain 418 509 5.1E-39 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Pfam PF02540 NAD synthase 209 286 6.3E-8 T 20-04-2016 IPR022310 NAD/GMP synthase APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 SUPERFAMILY SSF52402 181 432 4.74E-52 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PANTHER PTHR11922 1 507 3.3E-262 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Gene3D G3DSA:3.40.50.620 211 385 1.4E-55 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 192 3.1E-70 T 20-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Gene3D G3DSA:3.30.300.10 386 510 3.6E-50 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.5E-5 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.5E-5 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.5E-5 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.2E-6 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.2E-6 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.2E-6 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Gene3D G3DSA:3.40.50.880 1 210 7.8E-60 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 SUPERFAMILY SSF52317 3 225 3.36E-53 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 PANTHER PTHR11922:SF2 1 507 3.3E-262 T 20-04-2016 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Pfam PF00117 Glutamine amidotransferase class-I 8 188 1.3E-40 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 510 50.354 T 20-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APRE_RS01825 d5ea6e4bf92141f43595ae8ce8235efd 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 510 7.1E-145 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 Pfam PF00005 ABC transporter 23 171 5.7E-36 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 PANTHER PTHR24220:SF86 5 227 1.5E-102 T 20-04-2016 APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 ProSitePatterns PS01095 Chitinases family 18 active site. 23 31 - T 20-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 Gene3D G3DSA:3.40.50.300 3 238 1.5E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 SMART SM00382 32 220 1.5E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 PANTHER PTHR24220 5 227 1.5E-102 T 20-04-2016 APRE_RS01575 547d26c1d851a3146cf8050bfddfa2f2 240 SUPERFAMILY SSF52540 3 227 5.32E-75 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01615 e4bd3117329768baaab02f3e52c6b983 377 Gene3D G3DSA:3.40.50.2300 62 185 2.2E-41 T 20-04-2016 APRE_RS01615 e4bd3117329768baaab02f3e52c6b983 377 Gene3D G3DSA:3.40.50.2300 186 328 6.7E-53 T 20-04-2016 APRE_RS01615 e4bd3117329768baaab02f3e52c6b983 377 PANTHER PTHR34296 1 373 1.2E-109 T 20-04-2016 APRE_RS01615 e4bd3117329768baaab02f3e52c6b983 377 PANTHER PTHR34296:SF2 1 373 1.2E-109 T 20-04-2016 APRE_RS01615 e4bd3117329768baaab02f3e52c6b983 377 Pfam PF02608 Basic membrane protein 66 367 1.9E-70 T 20-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 APRE_RS01615 e4bd3117329768baaab02f3e52c6b983 377 SUPERFAMILY SSF53822 78 316 1.33E-11 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 PIRSF PIRSF004505 1 160 8.8E-52 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 PANTHER PTHR33603:SF1 1 160 4.9E-59 T 20-04-2016 APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 160 30.49 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 SUPERFAMILY SSF75217 1 158 4.64E-53 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 Gene3D G3DSA:3.40.1280.10 1 160 8.4E-59 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 159 1.8E-56 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 PANTHER PTHR33603 1 160 4.9E-59 T 20-04-2016 APRE_RS01595 b9254fcfd66475bf0c89b6611cb982c9 160 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 160 3.9E-50 T 20-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS05755 8fccf9b2db666b44493f97378bdffa69 169 Pfam PF08534 Redoxin 20 161 1.4E-17 T 20-04-2016 IPR013740 Redoxin GO:0016491 APRE_RS05755 8fccf9b2db666b44493f97378bdffa69 169 PANTHER PTHR10681 1 168 1.8E-40 T 20-04-2016 APRE_RS05755 8fccf9b2db666b44493f97378bdffa69 169 PANTHER PTHR10681:SF81 1 168 1.8E-40 T 20-04-2016 APRE_RS05755 8fccf9b2db666b44493f97378bdffa69 169 SUPERFAMILY SSF52833 10 162 2.78E-32 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS05755 8fccf9b2db666b44493f97378bdffa69 169 Gene3D G3DSA:3.40.30.10 5 167 1.1E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 SMART SM01103 2 85 5.4E-31 T 20-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 91 1.7E-24 T 20-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 91 1.0E-10 T 20-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 PANTHER PTHR31846 1 91 5.0E-23 T 20-04-2016 APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 Gene3D G3DSA:3.30.110.60 1 92 3.5E-28 T 20-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 7.8E-20 T 20-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APRE_RS04755 ba3aa562336ce985c65df6a4f1d9a4ca 94 SUPERFAMILY SSF75471 1 92 3.14E-27 T 20-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APRE_RS06260 db373616cab9bd01e199974b2fd0b390 422 Pfam PF03313 Serine dehydratase alpha chain 156 408 6.7E-51 T 20-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APRE_RS06260 db373616cab9bd01e199974b2fd0b390 422 PANTHER PTHR30501:SF2 6 416 7.7E-86 T 20-04-2016 APRE_RS06260 db373616cab9bd01e199974b2fd0b390 422 PANTHER PTHR30501 6 416 7.7E-86 T 20-04-2016 APRE_RS06260 db373616cab9bd01e199974b2fd0b390 422 PIRSF PIRSF006054 2 415 2.4E-123 T 20-04-2016 IPR021144 Uncharacterised protein family UPF0597 APRE_RS06260 db373616cab9bd01e199974b2fd0b390 422 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 1 413 30.762 T 20-04-2016 IPR021144 Uncharacterised protein family UPF0597 APRE_RS07740 a75217b519739438624ef9b1969394fb 76 SUPERFAMILY SSF52833 3 74 6.05E-20 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS07740 a75217b519739438624ef9b1969394fb 76 Pfam PF00462 Glutaredoxin 4 61 5.4E-17 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APRE_RS07740 a75217b519739438624ef9b1969394fb 76 Gene3D G3DSA:3.40.30.10 3 75 2.6E-23 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS07740 a75217b519739438624ef9b1969394fb 76 PANTHER PTHR34386:SF1 1 76 5.4E-16 T 20-04-2016 APRE_RS07740 a75217b519739438624ef9b1969394fb 76 PANTHER PTHR34386 1 76 5.4E-16 T 20-04-2016 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 3.64E-13 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 3.64E-13 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 3.64E-13 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 9.7E-36 T 20-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 SUPERFAMILY SSF50249 5 83 9.0E-31 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 Gene3D G3DSA:2.40.50.140 5 83 4.4E-34 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 Pfam PF00366 Ribosomal protein S17 11 77 2.3E-32 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 20-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 25.036 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 PANTHER PTHR10744 3 85 2.3E-35 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08025 d28ca34e803eb3c7379703239608caa4 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 5.0E-22 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 PANTHER PTHR30007:SF4 4 252 1.3E-26 T 20-04-2016 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 SMART SM00481 6 71 1.3E-12 T 20-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 SUPERFAMILY SSF89550 2 86 2.75E-39 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 SUPERFAMILY SSF89550 168 256 2.75E-39 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 Gene3D G3DSA:3.20.20.140 4 91 3.6E-32 T 20-04-2016 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 Gene3D G3DSA:3.20.20.140 159 258 3.6E-32 T 20-04-2016 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 PANTHER PTHR30007 4 252 1.3E-26 T 20-04-2016 APRE_RS02170 d35072b0f27d8fe929d2a09b1163b37f 276 Pfam PF02811 PHP domain 7 85 1.6E-10 T 20-04-2016 IPR004013 PHP domain GO:0003824 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 SUPERFAMILY SSF109604 386 498 8.16E-10 T 20-04-2016 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 685 23.856 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 PANTHER PTHR30075 1 687 1.6E-246 T 20-04-2016 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 686 1.5E-195 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 554 1.3E-192 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.4E-32 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.4E-32 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 1.4E-32 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.4E-32 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01815 9a6c0395ce378587e17c066bcb256a9d 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 1.4E-32 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 Pfam PF16745 RsgA N-terminal domain 3 56 3.1E-18 T 20-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 Pfam PF03193 Protein of unknown function, DUF258 59 222 3.1E-49 T 20-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 Gene3D G3DSA:3.40.50.300 64 221 1.6E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 SUPERFAMILY SSF52540 65 284 3.21E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 SUPERFAMILY SSF50249 2 63 4.71E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 Gene3D G3DSA:1.10.40.50 227 287 1.5E-19 T 20-04-2016 APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 279 1.0E-64 T 20-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 PANTHER PTHR32120 3 290 1.4E-91 T 20-04-2016 APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 Gene3D G3DSA:2.40.50.140 2 61 7.0E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 PANTHER PTHR32120:SF2 3 290 1.4E-91 T 20-04-2016 APRE_RS03485 5231c5179aedb6dc24c0b92f3329277e 290 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 2 286 33.258 T 20-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 SUPERFAMILY SSF75625 3 240 7.46E-92 T 20-04-2016 IPR029072 YebC-like APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 Pfam PF01709 Transcriptional regulator 5 237 6.5E-94 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.1E-96 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 PANTHER PTHR12532 1 241 7.8E-110 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 Gene3D G3DSA:1.10.10.200 1 79 8.7E-35 T 20-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 Gene3D G3DSA:3.30.1270.10 212 240 6.8E-39 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 Gene3D G3DSA:3.30.1270.10 82 136 6.8E-39 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 Gene3D G3DSA:3.30.70.980 137 205 4.7E-23 T 20-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APRE_RS06155 f8cc64200c354552d00c235448ba58a4 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.95 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APRE_RS03810 308774cec8eab5d2a810d4f567ab9d66 65 PANTHER PTHR10245:SF26 1 65 4.6E-21 T 20-04-2016 APRE_RS03810 308774cec8eab5d2a810d4f567ab9d66 65 Pfam PF01381 Helix-turn-helix 5 58 3.6E-16 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS03810 308774cec8eab5d2a810d4f567ab9d66 65 PANTHER PTHR10245 1 65 4.6E-21 T 20-04-2016 APRE_RS03810 308774cec8eab5d2a810d4f567ab9d66 65 Gene3D G3DSA:1.10.260.40 1 63 1.4E-23 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS03810 308774cec8eab5d2a810d4f567ab9d66 65 SMART SM00530 4 59 3.1E-15 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS03810 308774cec8eab5d2a810d4f567ab9d66 65 SUPERFAMILY SSF47413 2 62 3.22E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS07475 0338b03904b6940c6a55dd0f8ee1ca32 183 Pfam PF12672 Protein of unknown function (DUF3793) 6 181 4.6E-54 T 20-04-2016 IPR024523 Protein of unknown function DUF3793 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Gene3D G3DSA:3.30.70.20 104 152 6.1E-5 T 20-04-2016 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Pfam PF04060 Putative Fe-S cluster 45 75 5.1E-13 T 20-04-2016 IPR007202 4Fe-4S domain GO:0051536 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Gene3D G3DSA:3.30.70.20 153 177 9.2E-15 T 20-04-2016 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Pfam PF13187 4Fe-4S dicluster domain 143 187 4.1E-9 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 95 2.0E-22 T 20-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 214 265 1.1E-7 T 20-04-2016 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 SUPERFAMILY SSF54862 215 266 3.0E-5 T 20-04-2016 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Gene3D G3DSA:3.30.70.20 223 266 1.9E-7 T 20-04-2016 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 Gene3D G3DSA:1.10.1060.10 178 222 2.0E-6 T 20-04-2016 APRE_RS06705 02779ffd90fda7f362dfa7fdc30aadc1 267 SUPERFAMILY SSF54862 41 194 2.1E-17 T 20-04-2016 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 Gene3D G3DSA:1.10.260.40 10 70 3.6E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 SUPERFAMILY SSF48452 210 279 2.22E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 SUPERFAMILY SSF47413 6 72 1.46E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 Pfam PF01381 Helix-turn-helix 14 67 1.7E-12 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 SMART SM00530 13 68 1.3E-13 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 PANTHER PTHR10245 8 69 2.9E-12 T 20-04-2016 APRE_RS02995 ccb04ab3fd0e33b3eb19e4e0eb801761 304 Gene3D G3DSA:1.25.40.10 207 279 1.4E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS05880 fcae526912a163bef8ee31aa2d7be632 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 110 116 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APRE_RS05880 fcae526912a163bef8ee31aa2d7be632 233 Pfam PF05175 Methyltransferase small domain 36 163 7.7E-14 T 20-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APRE_RS05880 fcae526912a163bef8ee31aa2d7be632 233 SUPERFAMILY SSF53335 10 203 1.2E-30 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05880 fcae526912a163bef8ee31aa2d7be632 233 PANTHER PTHR18895 3 227 1.3E-54 T 20-04-2016 APRE_RS05880 fcae526912a163bef8ee31aa2d7be632 233 Gene3D G3DSA:3.40.50.150 26 229 5.0E-51 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05880 fcae526912a163bef8ee31aa2d7be632 233 PANTHER PTHR18895:SF75 3 227 1.3E-54 T 20-04-2016 APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 115 9.0E-25 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 Pfam PF02021 Uncharacterised protein family UPF0102 11 101 7.3E-29 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 114 22.627 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 PANTHER PTHR34039 1 115 4.0E-36 T 20-04-2016 APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 Gene3D G3DSA:3.40.1350.10 10 115 8.1E-34 T 20-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 SUPERFAMILY SSF52980 10 106 3.97E-23 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APRE_RS06550 7eb4fd1fa9b4340047abe6219632c4e0 115 PANTHER PTHR34039:SF1 1 115 4.0E-36 T 20-04-2016 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 Gene3D G3DSA:3.30.870.10 363 506 1.4E-28 T 20-04-2016 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 PANTHER PTHR21248 68 530 1.7E-73 T 20-04-2016 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 SUPERFAMILY SSF56024 160 359 2.04E-41 T 20-04-2016 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 SMART SM00155 266 293 6.6E-7 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 SMART SM00155 443 470 1.5E-4 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 Pfam PF13091 PLD-like domain 187 326 9.9E-14 T 20-04-2016 IPR025202 Phospholipase D-like domain APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 Pfam PF13091 PLD-like domain 370 495 6.2E-20 T 20-04-2016 IPR025202 Phospholipase D-like domain APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 69 524 3.5E-93 T 20-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 SUPERFAMILY SSF56024 321 507 1.05E-33 T 20-04-2016 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 Gene3D G3DSA:3.30.870.10 161 362 1.7E-43 T 20-04-2016 APRE_RS02285 868070137c5d8a1adc5daadebb2005f3 530 PANTHER PTHR21248:SF5 68 530 1.7E-73 T 20-04-2016 APRE_RS07990 4bb2a1cecd65f785759f62509c20ed1c 121 PANTHER PTHR12899 3 121 7.8E-44 T 20-04-2016 APRE_RS07990 4bb2a1cecd65f785759f62509c20ed1c 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 121 1.6E-41 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07990 4bb2a1cecd65f785759f62509c20ed1c 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 121 4.7E-45 T 20-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07990 4bb2a1cecd65f785759f62509c20ed1c 121 Gene3D G3DSA:3.30.420.100 23 121 1.8E-39 T 20-04-2016 APRE_RS07990 4bb2a1cecd65f785759f62509c20ed1c 121 SUPERFAMILY SSF53137 6 119 1.79E-49 T 20-04-2016 APRE_RS07990 4bb2a1cecd65f785759f62509c20ed1c 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 27.708 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05895 8f79cc48a01912c16ec335b22418e8fe 198 PANTHER PTHR18901 3 198 7.1E-14 T 20-04-2016 APRE_RS05895 8f79cc48a01912c16ec335b22418e8fe 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 169 2.7E-16 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05895 8f79cc48a01912c16ec335b22418e8fe 198 SUPERFAMILY SSF56784 3 198 9.92E-31 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05895 8f79cc48a01912c16ec335b22418e8fe 198 Gene3D G3DSA:1.10.150.240 15 66 3.7E-5 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APRE_RS05895 8f79cc48a01912c16ec335b22418e8fe 198 Gene3D G3DSA:3.40.50.1000 2 12 1.3E-17 T 20-04-2016 IPR023214 HAD-like domain APRE_RS05895 8f79cc48a01912c16ec335b22418e8fe 198 Gene3D G3DSA:3.40.50.1000 81 180 1.3E-17 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01035 df30c276f00fdb5ed1bb81b4c87c539c 115 Pfam PF06115 Domain of unknown function (DUF956) 1 114 2.6E-46 T 20-04-2016 IPR010360 Protein of unknown function DUF956 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 4.8E-58 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 SUPERFAMILY SSF51351 1 247 1.83E-93 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 Pfam PF00121 Triosephosphate isomerase 5 246 1.3E-92 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.372 T 20-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 Gene3D G3DSA:3.20.20.70 1 247 1.8E-103 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 20-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APRE_RS03965 5752bfa605abfd4cb9e8c8f44fc4adfe 250 PANTHER PTHR21139 1 248 2.4E-120 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 PRINTS PR00050 Cold shock protein signature 39 57 3.4E-6 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 PRINTS PR00050 Cold shock protein signature 4 19 3.4E-6 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 SUPERFAMILY SSF50249 1 66 3.43E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 SMART SM00357 3 66 9.9E-14 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 9.1E-20 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 Gene3D G3DSA:2.40.50.140 1 66 1.3E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 PIRSF PIRSF002599 1 67 9.6E-16 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 APRE_RS06295 f7258b1691367da4e190ee57d1f2cec3 67 PANTHER PTHR11544 1 67 1.9E-17 T 20-04-2016 APRE_RS08365 d6748a7a9bd57b6e11b993efff3498d9 65 PANTHER PTHR34472:SF1 1 65 1.4E-12 T 20-04-2016 APRE_RS08365 d6748a7a9bd57b6e11b993efff3498d9 65 PANTHER PTHR34472 1 65 1.4E-12 T 20-04-2016 APRE_RS08365 d6748a7a9bd57b6e11b993efff3498d9 65 Gene3D G3DSA:3.10.20.30 2 65 2.7E-14 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS08365 d6748a7a9bd57b6e11b993efff3498d9 65 SUPERFAMILY SSF54285 2 64 1.29E-11 T 20-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APRE_RS08365 d6748a7a9bd57b6e11b993efff3498d9 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 2 65 2.9E-13 T 20-04-2016 IPR010035 ThiS, thiamine-biosynthesis APRE_RS08365 d6748a7a9bd57b6e11b993efff3498d9 65 Pfam PF02597 ThiS family 7 65 1.1E-7 T 20-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APRE_RS06860 a93188ae7b23c3f02c2876cfde976649 163 Pfam PF05164 Cell division protein ZapA 6 116 3.2E-10 T 20-04-2016 IPR007838 Cell division protein ZapA-like APRE_RS06860 a93188ae7b23c3f02c2876cfde976649 163 PANTHER PTHR34981 2 136 6.1E-12 T 20-04-2016 APRE_RS06860 a93188ae7b23c3f02c2876cfde976649 163 SUPERFAMILY SSF102829 5 81 7.06E-13 T 20-04-2016 IPR007838 Cell division protein ZapA-like APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 SUPERFAMILY SSF51338 1 64 1.03E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 Pfam PF07969 Amidohydrolase family 90 402 2.0E-22 T 20-04-2016 IPR013108 Amidohydrolase 3 APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 PANTHER PTHR32027:SF0 37 393 4.6E-102 T 20-04-2016 APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 51 59 - T 20-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 Gene3D G3DSA:2.30.40.10 16 63 8.2E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 SUPERFAMILY SSF51556 50 375 6.38E-78 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 Gene3D G3DSA:3.20.20.140 64 364 8.3E-94 T 20-04-2016 APRE_RS05670 7e27ef53bbc94622a6a719f4d831fd0f 419 PANTHER PTHR32027 37 393 4.6E-102 T 20-04-2016 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 Pfam PF00817 impB/mucB/samB family 7 148 4.5E-44 T 20-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 SUPERFAMILY SSF56672 2 227 4.09E-77 T 20-04-2016 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 Gene3D G3DSA:3.30.1490.100 235 340 1.5E-30 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 Hamap MF_01113 DNA polymerase IV [dinB]. 1 343 34.064 T 20-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 Pfam PF11799 impB/mucB/samB family C-terminal domain 230 337 1.5E-17 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 PANTHER PTHR11076 1 345 4.6E-118 T 20-04-2016 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 Gene3D G3DSA:3.30.70.270 65 157 5.9E-27 T 20-04-2016 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 Gene3D G3DSA:1.10.150.20 160 228 4.1E-20 T 20-04-2016 APRE_RS03245 19339168d2327a46dcc39bf679cbf221 345 SUPERFAMILY SSF100879 232 332 3.61E-24 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS06635 fcb67262c7909f8b97fee18ffde34481 313 Gene3D G3DSA:3.40.50.300 4 225 5.8E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06635 fcb67262c7909f8b97fee18ffde34481 313 Pfam PF00005 ABC transporter 21 164 1.6E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS06635 fcb67262c7909f8b97fee18ffde34481 313 SUPERFAMILY SSF52540 5 226 4.07E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06635 fcb67262c7909f8b97fee18ffde34481 313 SMART SM00382 30 212 8.2E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06635 fcb67262c7909f8b97fee18ffde34481 313 PANTHER PTHR24220 7 225 8.2E-89 T 20-04-2016 APRE_RS01690 8138e02611f2302afb1997269e37ecbc 165 PANTHER PTHR30509 7 154 1.2E-16 T 20-04-2016 APRE_RS01690 8138e02611f2302afb1997269e37ecbc 165 Pfam PF06081 Aromatic acid exporter family member 1 6 153 2.0E-13 T 20-04-2016 IPR010343 Aromatic acid exporter family member 1 APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 PANTHER PTHR30582:SF2 327 461 4.0E-34 T 20-04-2016 APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 Pfam PF12229 Putative peptidoglycan binding domain 199 306 1.7E-9 T 20-04-2016 IPR022029 Putative peptidoglycan binding domain APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 Pfam PF12229 Putative peptidoglycan binding domain 103 181 1.1E-8 T 20-04-2016 IPR022029 Putative peptidoglycan binding domain APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 Gene3D G3DSA:2.40.440.10 330 458 9.8E-18 T 20-04-2016 APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 SUPERFAMILY SSF143985 205 322 1.44E-18 T 20-04-2016 APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 PANTHER PTHR30582 327 461 4.0E-34 T 20-04-2016 APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 SUPERFAMILY SSF141523 329 458 3.4E-30 T 20-04-2016 APRE_RS07295 2cdcbf0caa031323f2456a9c9fe07622 470 Pfam PF03734 L,D-transpeptidase catalytic domain 332 457 2.0E-15 T 20-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 SUPERFAMILY SSF50249 1 62 1.14E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Pfam PF01330 RuvA N terminal domain 1 61 3.3E-18 T 20-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Pfam PF14520 Helix-hairpin-helix domain 71 127 7.3E-15 T 20-04-2016 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 SUPERFAMILY SSF47781 65 134 7.94E-19 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 PANTHER PTHR33796 2 195 2.2E-53 T 20-04-2016 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 26.544 T 20-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 SUPERFAMILY SSF46929 149 194 2.75E-7 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Gene3D G3DSA:1.10.8.10 155 194 1.5E-8 T 20-04-2016 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Pfam PF07499 RuvA, C-terminal domain 155 194 2.0E-7 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Gene3D G3DSA:1.10.150.20 66 136 1.3E-25 T 20-04-2016 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 Gene3D G3DSA:2.40.50.140 1 65 1.3E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 195 6.5E-41 T 20-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 SMART SM00278 107 126 17.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS04625 bb7fbcc0199ee3b647bf5303ab3ea4d5 195 SMART SM00278 72 91 110.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05070 7604f402c9afc4f4c786b22a43e92386 100 Pfam PF14131 Domain of unknown function (DUF4298) 7 91 9.4E-27 T 20-04-2016 IPR025384 Protein of unknown function DUF4298 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 Pfam PF00731 AIR carboxylase 3 145 3.2E-55 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 PANTHER PTHR23046 4 158 2.2E-61 T 20-04-2016 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 Gene3D G3DSA:3.40.50.7700 3 156 3.2E-59 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 PIRSF PIRSF001338 1 158 1.0E-58 T 20-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 SMART SM01001 2 148 3.9E-72 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 SUPERFAMILY SSF52255 4 156 1.31E-55 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 152 26.608 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05635 a65106c7efef412e81ab139462bab0a4 158 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 155 3.3E-55 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05835 20a9c8840004f950023248f91fb5c922 182 Pfam PF00466 Ribosomal protein L10 7 101 4.4E-27 T 20-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APRE_RS05835 20a9c8840004f950023248f91fb5c922 182 PANTHER PTHR11560 1 182 1.2E-42 T 20-04-2016 APRE_RS05835 20a9c8840004f950023248f91fb5c922 182 SUPERFAMILY SSF160369 7 177 2.48E-48 T 20-04-2016 APRE_RS05835 20a9c8840004f950023248f91fb5c922 182 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 166 21.94 T 20-04-2016 IPR022973 Ribosomal protein L10 APRE_RS05270 5cd50edb766ce3c76f99d37730ca0400 127 Pfam PF01029 NusB family 6 123 6.1E-26 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APRE_RS05270 5cd50edb766ce3c76f99d37730ca0400 127 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 124 6.8E-27 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 APRE_RS05270 5cd50edb766ce3c76f99d37730ca0400 127 SUPERFAMILY SSF48013 3 124 1.7E-25 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APRE_RS05270 5cd50edb766ce3c76f99d37730ca0400 127 Gene3D G3DSA:1.10.940.10 1 124 5.4E-28 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APRE_RS05270 5cd50edb766ce3c76f99d37730ca0400 127 PANTHER PTHR11078 1 124 3.3E-23 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 Pfam PF01580 FtsK/SpoIIIE family 404 537 3.9E-40 T 20-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 Pfam PF01580 FtsK/SpoIIIE family 540 594 8.8E-14 T 20-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 SMART SM00843 695 760 5.0E-34 T 20-04-2016 IPR018541 FtsK gamma domain APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 PANTHER PTHR22683 215 758 2.9E-200 T 20-04-2016 APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 Pfam PF09397 Ftsk gamma domain 697 757 2.6E-28 T 20-04-2016 IPR018541 FtsK gamma domain APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 SUPERFAMILY SSF46785 696 760 1.77E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 Gene3D G3DSA:3.40.50.300 378 662 3.7E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 SMART SM00382 439 624 0.008 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 SUPERFAMILY SSF52540 377 665 1.71E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 56 186 1.8E-8 T 20-04-2016 IPR025199 DNA translocase FtsK, 4TM region APRE_RS03230 085483e08604d278fe9d01c4d50a7467 770 PANTHER PTHR22683:SF41 215 758 2.9E-200 T 20-04-2016 APRE_RS00015 1da9b5c88f7a8083abe4e755f77852f5 68 SUPERFAMILY SSF55174 2 67 1.07E-13 T 20-04-2016 APRE_RS00015 1da9b5c88f7a8083abe4e755f77852f5 68 Gene3D G3DSA:3.10.290.10 1 67 3.2E-19 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS00015 1da9b5c88f7a8083abe4e755f77852f5 68 PANTHER PTHR32319:SF3 5 68 2.3E-12 T 20-04-2016 APRE_RS00015 1da9b5c88f7a8083abe4e755f77852f5 68 PANTHER PTHR32319 5 68 2.3E-12 T 20-04-2016 APRE_RS00015 1da9b5c88f7a8083abe4e755f77852f5 68 Pfam PF13275 S4 domain 4 68 1.3E-20 T 20-04-2016 APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 11 105 22.979 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 PANTHER PTHR33449:SF1 12 112 3.4E-45 T 20-04-2016 APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 Pfam PF02575 YbaB/EbfC DNA-binding family 17 107 1.4E-36 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 PIRSF PIRSF004555 9 112 2.5E-38 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 PANTHER PTHR33449 12 112 3.4E-45 T 20-04-2016 APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 SUPERFAMILY SSF82607 17 111 3.01E-33 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 9 111 1.6E-27 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APRE_RS04090 211b7e1d2b7e2a406cf8fa39bd9c5f65 112 Gene3D G3DSA:3.30.1310.10 9 112 1.5E-42 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 PANTHER PTHR39156 1 176 1.6E-67 T 20-04-2016 APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 Pfam PF13331 Domain of unknown function (DUF4093) 89 173 1.7E-28 T 20-04-2016 IPR025156 Ribonuclease M5, C-terminal domain APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 SUPERFAMILY SSF110455 1 113 1.2E-32 T 20-04-2016 APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 Gene3D G3DSA:3.40.1360.20 1 121 3.8E-38 T 20-04-2016 APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 172 6.7E-49 T 20-04-2016 IPR004466 Ribonuclease M5 GO:0043822 APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 SMART SM00493 3 76 1.9E-10 T 20-04-2016 IPR006171 Toprim domain APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 Hamap MF_01469 Ribonuclease M5 [rnmV]. 2 176 29.8 T 20-04-2016 IPR004466 Ribonuclease M5 GO:0043822 APRE_RS07750 8138fb2b23a8721aefab83e54a996893 176 Pfam PF01751 Toprim domain 5 78 2.2E-6 T 20-04-2016 IPR006171 Toprim domain APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 SMART SM00934 16 265 4.1E-21 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 Gene3D G3DSA:3.20.20.70 9 257 4.7E-56 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 PANTHER PTHR19278 1 24 2.5E-57 T 20-04-2016 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 PANTHER PTHR19278 42 237 2.5E-57 T 20-04-2016 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 283 33.762 T 20-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 255 3.3E-65 T 20-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 PANTHER PTHR19278:SF1 1 24 2.5E-57 T 20-04-2016 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 PANTHER PTHR19278:SF1 42 237 2.5E-57 T 20-04-2016 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 SUPERFAMILY SSF51366 3 259 2.73E-68 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APRE_RS04045 61c332069b167790f222fd3c77d038d0 287 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 18 255 8.3E-25 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF04561 RNA polymerase Rpb2, domain 2 404 439 1.5E-5 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF04561 RNA polymerase Rpb2, domain 2 141 284 5.8E-21 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 PANTHER PTHR20856 11 287 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 PANTHER PTHR20856 408 1178 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF04565 RNA polymerase Rpb2, domain 3 498 566 2.4E-30 T 20-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF00562 RNA polymerase Rpb2, domain 6 713 1096 1.9E-157 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 PANTHER PTHR20856:SF20 11 287 0.0 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 PANTHER PTHR20856:SF20 408 1178 0.0 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF04563 RNA polymerase beta subunit 29 485 2.6E-21 T 20-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF10385 RNA polymerase beta subunit external 1 domain 576 643 8.5E-24 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 ProSitePatterns PS01166 RNA polymerases beta chain signature. 944 956 - T 20-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:3.90.1100.10 646 700 3.1E-145 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:3.90.1100.10 430 576 3.1E-145 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:3.90.1100.10 22 141 3.1E-145 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:3.90.1110.10 143 296 2.4E-61 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:3.90.1110.10 405 429 2.4E-61 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:2.40.50.150 809 940 2.2E-56 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 205 918 4.2E-288 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1174 12.295 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:2.40.270.10 774 801 1.3E-72 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:2.40.270.10 941 1074 1.3E-72 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:2.30.150.10 577 643 2.8E-24 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Gene3D G3DSA:2.40.50.100 701 773 1.3E-26 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 SUPERFAMILY SSF64484 13 289 0.0 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 SUPERFAMILY SSF64484 396 1184 0.0 T 20-04-2016 APRE_RS02370 3ae6f7b7776f172f3af8ecdccbfa0d8f 1235 Pfam PF04560 RNA polymerase Rpb2, domain 7 1098 1172 5.7E-27 T 20-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 SUPERFAMILY SSF143856 100 215 1.83E-48 T 20-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 PANTHER PTHR21110:SF0 5 391 1.8E-132 T 20-04-2016 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 Hamap MF_00740 Phosphopentomutase [deoB]. 4 386 49.409 T 20-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 Pfam PF01676 Metalloenzyme superfamily 5 377 6.6E-33 T 20-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 PANTHER PTHR21110 5 391 1.8E-132 T 20-04-2016 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 PIRSF PIRSF001491 3 390 6.5E-146 T 20-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 Gene3D G3DSA:3.40.720.10 2 99 2.2E-68 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 Gene3D G3DSA:3.40.720.10 219 389 2.2E-68 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 Gene3D G3DSA:3.30.70.1250 100 215 1.7E-54 T 20-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 SUPERFAMILY SSF53649 3 100 3.42E-69 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 SUPERFAMILY SSF53649 216 387 3.42E-69 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APRE_RS00185 da69b3b92a751a4eca054ad7e83df127 391 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 378 9.2E-150 T 20-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APRE_RS08470 aa28e80ca961cfba60ed8d787b29a54a 69 SMART SM00530 6 61 5.9E-16 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS08470 aa28e80ca961cfba60ed8d787b29a54a 69 Pfam PF01381 Helix-turn-helix 9 60 1.6E-16 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS08470 aa28e80ca961cfba60ed8d787b29a54a 69 PANTHER PTHR10245:SF50 1 66 4.8E-20 T 20-04-2016 APRE_RS08470 aa28e80ca961cfba60ed8d787b29a54a 69 PANTHER PTHR10245 1 66 4.8E-20 T 20-04-2016 APRE_RS08470 aa28e80ca961cfba60ed8d787b29a54a 69 Gene3D G3DSA:1.10.260.40 5 66 1.0E-24 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS08470 aa28e80ca961cfba60ed8d787b29a54a 69 SUPERFAMILY SSF47413 3 66 5.36E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 Pfam PF00919 Uncharacterized protein family UPF0004 16 116 1.1E-26 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 15 444 5.9E-150 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 SMART SM00729 158 375 3.4E-62 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 14 449 65.859 T 20-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 162 182 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 Pfam PF01938 TRAM domain 387 448 1.8E-11 T 20-04-2016 IPR002792 TRAM domain APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 PANTHER PTHR11918 12 449 1.2E-160 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 16 448 8.8E-156 T 20-04-2016 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 Gene3D G3DSA:3.80.30.20 159 387 5.4E-80 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 SUPERFAMILY SSF102114 149 379 1.57E-59 T 20-04-2016 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 Gene3D G3DSA:2.40.50.140 390 448 3.3E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 Pfam PF04055 Radical SAM superfamily 162 332 1.9E-32 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS05200 6f395894b6edf3f1b31673b43b7d4558 449 PANTHER PTHR11918:SF43 12 449 1.2E-160 T 20-04-2016 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PANTHER PTHR22912:SF48 1 285 3.4E-57 T 20-04-2016 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PANTHER PTHR22912 1 285 3.4E-57 T 20-04-2016 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 Gene3D G3DSA:3.50.50.60 115 215 8.4E-10 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 270 2.5E-18 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 Gene3D G3DSA:3.50.50.60 2 113 3.5E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 Gene3D G3DSA:3.50.50.60 225 282 3.5E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 SUPERFAMILY SSF51905 1 283 1.79E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.0E-16 T 20-04-2016 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 257 2.0E-16 T 20-04-2016 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 2.0E-16 T 20-04-2016 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 137 161 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 55 65 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 35 50 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 134 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS08780 8761cb5c0dc3a88a05f9e328da4833b6 287 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 281 9.7E-34 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 PANTHER PTHR22573:SF54 19 564 1.0E-198 T 20-04-2016 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 SUPERFAMILY SSF53738 208 310 2.71E-17 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 228 247 2.0E-7 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 295 310 2.0E-7 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 2.0E-7 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 179 5.6E-41 T 20-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 492 544 3.1E-10 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 310 8.5E-20 T 20-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Gene3D G3DSA:3.40.120.10 22 216 8.7E-59 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 SUPERFAMILY SSF55957 443 561 3.79E-15 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 448 3.1E-20 T 20-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 SUPERFAMILY SSF53738 32 234 1.69E-46 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 SUPERFAMILY SSF53738 303 453 7.46E-28 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Gene3D G3DSA:3.40.120.10 230 305 7.0E-20 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 PANTHER PTHR22573 19 564 1.0E-198 T 20-04-2016 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 20-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Gene3D G3DSA:3.40.120.10 306 453 1.0E-32 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS04470 4a25ebb5faba1424e104444ab187d80b 564 Gene3D G3DSA:3.30.310.50 479 561 6.7E-27 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 Gene3D G3DSA:2.30.40.10 2 67 2.0E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 Gene3D G3DSA:3.20.20.140 68 321 1.7E-53 T 20-04-2016 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 SUPERFAMILY SSF51556 58 339 2.77E-64 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 1 438 1.9E-160 T 20-04-2016 IPR017700 Putative selenium metabolism protein SsnA APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 PANTHER PTHR11271 1 437 2.4E-155 T 20-04-2016 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 PANTHER PTHR11271:SF40 1 437 2.4E-155 T 20-04-2016 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 Gene3D G3DSA:2.30.40.10 322 416 4.0E-23 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 SUPERFAMILY SSF51338 1 58 3.18E-29 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 SUPERFAMILY SSF51338 361 436 3.18E-29 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS07330 9b4c7c316d28c08a3fcaa0fa82d6c3c6 439 Pfam PF01979 Amidohydrolase family 55 410 3.0E-37 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 SUPERFAMILY SSF50249 1 176 2.25E-43 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 Pfam PF00436 Single-strand binding protein family 1 109 3.9E-33 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 PANTHER PTHR10302 1 176 5.6E-36 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 PIRSF PIRSF002070 1 159 2.1E-34 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 164 2.1E-38 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 Hamap MF_00984 Single-stranded DNA-binding protein. 1 114 30.489 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APRE_RS02560 24df562d62fe4baf33b89bad0ae1b273 176 Gene3D G3DSA:2.40.50.140 1 164 2.4E-38 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 SMART SM00849 19 213 6.2E-23 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 PANTHER PTHR11203:SF22 1 557 8.4E-219 T 20-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 SUPERFAMILY SSF56281 7 422 1.3E-96 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 Pfam PF00753 Metallo-beta-lactamase superfamily 18 163 6.2E-17 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 358 405 3.3E-8 T 20-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 Gene3D G3DSA:3.60.15.10 3 253 7.7E-83 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 PANTHER PTHR11203 1 557 8.4E-219 T 20-04-2016 APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 550 7.1E-185 T 20-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 Hamap MF_01491 Ribonuclease J [rnj]. 2 553 44.941 T 20-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 PIRSF PIRSF004803 1 553 4.8E-233 T 20-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 APRE_RS04810 ce1ca8c135db3131a93438529d28d551 560 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 362 390 - T 20-04-2016 IPR001587 Ribonuclease J, conserved site APRE_RS00975 59d7155f722d8443809a318c736c9bf7 125 SMART SM00345 17 76 2.0E-7 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00975 59d7155f722d8443809a318c736c9bf7 125 PANTHER PTHR38445:SF2 1 123 2.5E-15 T 20-04-2016 APRE_RS00975 59d7155f722d8443809a318c736c9bf7 125 PANTHER PTHR38445 1 123 2.5E-15 T 20-04-2016 APRE_RS00975 59d7155f722d8443809a318c736c9bf7 125 SUPERFAMILY SSF46785 7 86 8.17E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00975 59d7155f722d8443809a318c736c9bf7 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.0E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS00975 59d7155f722d8443809a318c736c9bf7 125 Gene3D G3DSA:1.10.10.10 3 77 1.8E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 SMART SM00937 63 177 1.2E-53 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 Gene3D G3DSA:3.30.160.20 209 287 6.8E-35 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 5.8E-154 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 SUPERFAMILY SSF75620 8 351 3.14E-134 T 20-04-2016 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 PANTHER PTHR11075 1 354 7.9E-170 T 20-04-2016 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 Gene3D G3DSA:1.20.58.410 5 91 5.2E-18 T 20-04-2016 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 38.767 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 Pfam PF03462 PCRF domain 9 202 4.8E-71 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 PANTHER PTHR11075:SF9 1 354 7.9E-170 T 20-04-2016 APRE_RS03895 04445bd28e5a128d10c1530f08a03987 358 Pfam PF00472 RF-1 domain 210 319 1.2E-42 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 SUPERFAMILY SSF52540 4 623 9.77E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 273 1.1E-46 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Gene3D G3DSA:3.40.50.300 5 275 1.1E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 PANTHER PTHR11070 6 499 7.3E-75 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 PANTHER PTHR11070 520 618 7.3E-75 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Pfam PF13361 UvrD-like helicase C-terminal domain 471 610 9.7E-15 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Pfam PF13361 UvrD-like helicase C-terminal domain 285 405 1.8E-10 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Pfam PF12705 PD-(D/E)XK nuclease superfamily 653 849 2.2E-15 T 20-04-2016 APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Gene3D G3DSA:3.40.50.300 542 617 1.5E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07680 75a3a8af671f994858fc043e9101a1de 851 Gene3D G3DSA:3.40.50.300 288 398 1.5E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 Gene3D G3DSA:3.90.226.10 1 199 2.7E-77 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 PANTHER PTHR11941:SF54 1 256 8.9E-105 T 20-04-2016 APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 258 2.2E-68 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 PANTHER PTHR11941 1 256 8.9E-105 T 20-04-2016 APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 Gene3D G3DSA:1.10.12.10 200 259 2.9E-18 T 20-04-2016 IPR014748 Crontonase, C-terminal APRE_RS06935 cad095b9554e4c5d2b2c91c50d04be9f 259 SUPERFAMILY SSF52096 1 258 5.43E-87 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS08300 e9c5f0a61c01d984c0642359d6f000ea 130 SUPERFAMILY SSF102546 1 126 3.4E-36 T 20-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APRE_RS08300 e9c5f0a61c01d984c0642359d6f000ea 130 PANTHER PTHR37831:SF1 2 130 7.3E-42 T 20-04-2016 APRE_RS08300 e9c5f0a61c01d984c0642359d6f000ea 130 PANTHER PTHR37831 2 130 7.3E-42 T 20-04-2016 APRE_RS08300 e9c5f0a61c01d984c0642359d6f000ea 130 Pfam PF05025 RbsD / FucU transport protein family 1 126 2.0E-40 T 20-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APRE_RS08300 e9c5f0a61c01d984c0642359d6f000ea 130 Gene3D G3DSA:3.40.1650.10 1 125 4.1E-26 T 20-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APRE_RS03540 47be71d6653ea0abf198d2019afccede 195 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 23 96 3.4E-19 T 20-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 SUPERFAMILY SSF103473 22 437 2.49E-33 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 Pfam PF13347 MFS/sugar transport protein 13 436 3.1E-94 T 20-04-2016 APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 447 1.6E-135 T 20-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 20-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 PANTHER PTHR11328 6 435 2.1E-114 T 20-04-2016 APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 Gene3D G3DSA:1.20.1250.20 21 201 9.7E-13 T 20-04-2016 APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 Gene3D G3DSA:1.20.1250.20 230 431 1.3E-12 T 20-04-2016 APRE_RS00375 031302a59b3986a0cf26ae18522e31d7 448 PANTHER PTHR11328:SF36 6 435 2.1E-114 T 20-04-2016 APRE_RS07240 7defbb0abd404164c1cb29455697d27a 74 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 20-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APRE_RS07240 7defbb0abd404164c1cb29455697d27a 74 Pfam PF00403 Heavy-metal-associated domain 5 57 1.8E-11 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APRE_RS07240 7defbb0abd404164c1cb29455697d27a 74 Gene3D G3DSA:3.30.70.100 1 57 1.9E-17 T 20-04-2016 APRE_RS07240 7defbb0abd404164c1cb29455697d27a 74 SUPERFAMILY SSF55008 1 61 1.07E-14 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 Gene3D G3DSA:2.40.280.10 3 122 2.9E-48 T 20-04-2016 IPR023620 Small protein B APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 PANTHER PTHR30308:SF2 1 147 1.1E-65 T 20-04-2016 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 ProSitePatterns PS01317 SsrA-binding protein. 22 34 - T 20-04-2016 IPR020081 SsrA-binding protein, conserved site APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 Pfam PF01668 SmpB protein 4 66 4.5E-28 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 Hamap MF_00023 SsrA-binding protein [smpB]. 1 147 66.845 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 TIGRFAM TIGR00086 smpB: SsrA-binding protein 4 145 6.8E-54 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 127 2.0E-30 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 PANTHER PTHR30308 1 147 1.1E-65 T 20-04-2016 APRE_RS03985 e4491c9fcbb4edc77a2a6ca9c2661ed2 147 SUPERFAMILY SSF74982 2 127 2.35E-48 T 20-04-2016 IPR023620 Small protein B APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 Gene3D G3DSA:3.20.20.80 173 471 3.0E-107 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 Gene3D G3DSA:3.20.20.80 2 104 3.0E-107 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 SMART SM00642 13 416 7.1E-123 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 Gene3D G3DSA:3.90.400.10 105 172 7.3E-31 T 20-04-2016 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 PANTHER PTHR10357 453 520 1.6E-163 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 PANTHER PTHR10357 1 391 1.6E-163 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 PANTHER PTHR10357 409 421 1.6E-163 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 Pfam PF00128 Alpha amylase, catalytic domain 28 373 3.4E-99 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 SUPERFAMILY SSF51011 480 549 4.24E-8 T 20-04-2016 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 SUPERFAMILY SSF51445 3 471 5.43E-136 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 Gene3D G3DSA:2.60.40.1180 481 549 3.4E-8 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 PANTHER PTHR10357:SF142 453 520 1.6E-163 T 20-04-2016 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 PANTHER PTHR10357:SF142 1 391 1.6E-163 T 20-04-2016 APRE_RS08215 6e9ef3c7b7905bfd70249696b18f2d15 554 PANTHER PTHR10357:SF142 409 421 1.6E-163 T 20-04-2016 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 SUPERFAMILY SSF117892 148 287 1.7E-11 T 20-04-2016 IPR001107 Band 7 domain APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 Pfam PF01145 SPFH domain / Band 7 family 84 294 1.0E-20 T 20-04-2016 IPR001107 Band 7 domain APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264:SF46 313 328 6.5E-57 T 20-04-2016 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264:SF46 143 223 6.5E-57 T 20-04-2016 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264:SF46 32 112 6.5E-57 T 20-04-2016 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264:SF46 242 290 6.5E-57 T 20-04-2016 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264 313 328 6.5E-57 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264 143 223 6.5E-57 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264 32 112 6.5E-57 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 PANTHER PTHR10264 242 290 6.5E-57 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APRE_RS01190 69ee0039bc0e61aee086d64cd29b62da 352 SMART SM00244 78 285 6.5E-19 T 20-04-2016 IPR001107 Band 7 domain APRE_RS08065 bb00aa1afb98e02a991bccab0dc0e35e 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 35.205 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APRE_RS08065 bb00aa1afb98e02a991bccab0dc0e35e 207 PANTHER PTHR10746 1 207 1.1E-86 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APRE_RS08065 bb00aa1afb98e02a991bccab0dc0e35e 207 SUPERFAMILY SSF52166 1 206 1.22E-79 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APRE_RS08065 bb00aa1afb98e02a991bccab0dc0e35e 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 5.0E-78 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APRE_RS08065 bb00aa1afb98e02a991bccab0dc0e35e 207 Gene3D G3DSA:3.40.1370.10 58 206 2.2E-60 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APRE_RS08065 bb00aa1afb98e02a991bccab0dc0e35e 207 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 5.7E-69 T 20-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 SMART SM00900 47 120 2.1E-14 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 535 557 1.0E-6 T 20-04-2016 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 164 1.0E-6 T 20-04-2016 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 Gene3D G3DSA:3.90.700.10 394 522 2.1E-30 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 Gene3D G3DSA:3.50.50.60 527 589 2.5E-98 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 Gene3D G3DSA:3.50.50.60 128 371 2.5E-98 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 144 583 6.1E-133 T 20-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 Pfam PF04205 FMN-binding domain 47 118 2.5E-14 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 SUPERFAMILY SSF51905 135 388 3.98E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 SUPERFAMILY SSF51905 530 589 3.98E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 SUPERFAMILY SSF56425 393 531 1.64E-33 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 Pfam PF00890 FAD binding domain 144 569 5.9E-79 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APRE_RS02040 cd46bda8d054234688ecc4c41742e87c 591 PANTHER PTHR11632 134 589 2.7E-121 T 20-04-2016 APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 Pfam PF03572 Peptidase family S41 234 447 8.4E-24 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 SMART SM00245 204 449 0.0091 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 Pfam PF14684 Tricorn protease C1 domain 88 159 3.3E-14 T 20-04-2016 IPR028204 Tricorn protease C1 domain APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 Gene3D G3DSA:3.30.750.44 89 158 2.5E-7 T 20-04-2016 APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 Gene3D G3DSA:3.90.226.10 348 450 4.6E-27 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 Gene3D G3DSA:3.90.226.10 226 310 4.6E-27 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 SUPERFAMILY SSF52096 361 451 2.15E-36 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 SUPERFAMILY SSF52096 207 300 2.15E-36 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS00955 fb572eedd59c642a9668ff777451fb48 466 SUPERFAMILY SSF52096 89 169 2.15E-36 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 174 369 4.3E-66 T 20-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 SUPERFAMILY SSF52402 174 377 6.62E-46 T 20-04-2016 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 PANTHER PTHR14911 7 386 1.9E-123 T 20-04-2016 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 SUPERFAMILY SSF143437 5 172 2.09E-40 T 20-04-2016 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 Gene3D G3DSA:3.40.50.620 172 331 6.3E-49 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 7 371 3.3E-108 T 20-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 387 130.259 T 20-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 SMART SM00981 73 164 2.9E-20 T 20-04-2016 IPR004114 THUMP domain GO:0003723 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 PANTHER PTHR14911:SF16 7 386 1.9E-123 T 20-04-2016 APRE_RS04730 c9f47dc6118ba188e99dcfb7cf7ac8e7 387 Pfam PF02926 THUMP domain 58 163 5.3E-15 T 20-04-2016 IPR004114 THUMP domain GO:0003723 APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 PIRSF PIRSF002854 1 273 3.8E-77 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 PANTHER PTHR30429 1 273 2.0E-87 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 Gene3D G3DSA:3.40.190.10 123 219 4.7E-41 T 20-04-2016 APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 SUPERFAMILY SSF53850 32 272 8.4E-71 T 20-04-2016 APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 Pfam PF03180 NLPA lipoprotein 32 272 2.2E-72 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 Gene3D G3DSA:3.40.190.10 1 122 1.5E-4 T 20-04-2016 APRE_RS01515 003314e1c57acdfa8bacfe90561587ba 275 Gene3D G3DSA:3.40.190.10 228 264 1.5E-4 T 20-04-2016 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 SUPERFAMILY SSF89623 1 144 1.11E-55 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 144 1.3E-54 T 20-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 145 3.2E-54 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 PANTHER PTHR30345 1 147 1.5E-71 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 Pfam PF02502 Ribose/Galactose Isomerase 4 140 8.2E-56 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 Gene3D G3DSA:3.40.1400.10 1 147 8.9E-61 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS04965 8beea6dec10e1563a4e28645633e904c 149 PIRSF PIRSF005384 1 147 1.2E-56 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 Gene3D G3DSA:1.10.10.10 6 78 3.3E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 PANTHER PTHR30126 1 280 5.3E-58 T 20-04-2016 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 Gene3D G3DSA:3.40.190.10 88 169 5.1E-11 T 20-04-2016 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 Gene3D G3DSA:3.40.190.10 170 262 1.9E-10 T 20-04-2016 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 Pfam PF03466 LysR substrate binding domain 88 277 5.1E-23 T 20-04-2016 IPR005119 LysR, substrate-binding APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 SUPERFAMILY SSF46785 6 84 2.73E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 PANTHER PTHR30126:SF11 1 280 5.3E-58 T 20-04-2016 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.5E-16 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-9 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-9 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-9 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APRE_RS01875 6c8a32591212d019d2f0adfb07e15014 291 SUPERFAMILY SSF53850 89 280 1.14E-25 T 20-04-2016 APRE_RS04310 195e4f642000a8125b2aa614eaecc6af 313 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 25 304 9.8E-23 T 20-04-2016 IPR006444 Phage major capsid protein, HK97 APRE_RS04310 195e4f642000a8125b2aa614eaecc6af 313 Pfam PF05065 Phage capsid family 25 304 2.5E-35 T 20-04-2016 IPR024455 Phage capsid APRE_RS04310 195e4f642000a8125b2aa614eaecc6af 313 SUPERFAMILY SSF56563 25 305 1.83E-32 T 20-04-2016 APRE_RS05265 bdcb1cde1123e76ae3a049a22437503c 394 PANTHER PTHR30008 1 361 4.0E-85 T 20-04-2016 APRE_RS05265 bdcb1cde1123e76ae3a049a22437503c 394 Pfam PF13742 OB-fold nucleic acid binding domain 5 98 1.0E-13 T 20-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APRE_RS05265 bdcb1cde1123e76ae3a049a22437503c 394 PANTHER PTHR30008:SF0 1 361 4.0E-85 T 20-04-2016 APRE_RS05265 bdcb1cde1123e76ae3a049a22437503c 394 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 392 2.5E-105 T 20-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APRE_RS05265 bdcb1cde1123e76ae3a049a22437503c 394 Pfam PF02601 Exonuclease VII, large subunit 122 345 1.6E-59 T 20-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APRE_RS05265 bdcb1cde1123e76ae3a049a22437503c 394 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 393 20.235 T 20-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APRE_RS01440 8f3503903f8e91d0174e1b4f026feb13 172 Pfam PF13302 Acetyltransferase (GNAT) domain 64 154 9.7E-8 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS01440 8f3503903f8e91d0174e1b4f026feb13 172 Gene3D G3DSA:3.40.630.30 4 160 1.6E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01440 8f3503903f8e91d0174e1b4f026feb13 172 SUPERFAMILY SSF55729 60 159 2.34E-15 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 PANTHER PTHR10889 4 218 6.5E-84 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 SMART SM01133 5 215 2.3E-80 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 Gene3D G3DSA:3.20.20.70 2 217 4.1E-84 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 Pfam PF01791 DeoC/LacD family aldolase 17 196 2.9E-21 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 4 217 33.325 T 20-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 PIRSF PIRSF001357 1 221 7.8E-76 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 SUPERFAMILY SSF51569 4 215 6.07E-78 T 20-04-2016 APRE_RS00180 c7a5a7cdfe3f601e0b31de70c7edecac 222 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 212 3.9E-72 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APRE_RS08680 e665fd7a83ea6955f2d3af6dff9eacec 352 Gene3D G3DSA:1.10.620.20 22 325 1.2E-99 T 20-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APRE_RS08680 e665fd7a83ea6955f2d3af6dff9eacec 352 Pfam PF00268 Ribonucleotide reductase, small chain 37 310 2.6E-80 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APRE_RS08680 e665fd7a83ea6955f2d3af6dff9eacec 352 PIRSF PIRSF000355 5 352 1.0E-122 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APRE_RS08680 e665fd7a83ea6955f2d3af6dff9eacec 352 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 124 140 - T 20-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APRE_RS08680 e665fd7a83ea6955f2d3af6dff9eacec 352 PANTHER PTHR23409 20 347 9.1E-83 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APRE_RS08680 e665fd7a83ea6955f2d3af6dff9eacec 352 SUPERFAMILY SSF47240 24 348 1.26E-94 T 20-04-2016 IPR009078 Ferritin-like superfamily APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 SUPERFAMILY SSF51445 151 563 1.71E-82 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 51 130 1.7E-12 T 20-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 571 661 6.8E-13 T 20-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 Gene3D G3DSA:2.60.40.1180 573 660 1.5E-9 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 SUPERFAMILY SSF81296 43 140 4.2E-18 T 20-04-2016 IPR014756 Immunoglobulin E-set APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 SUPERFAMILY SSF51011 567 660 1.65E-13 T 20-04-2016 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 PANTHER PTHR10357 5 661 1.3E-241 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 SMART SM00642 152 534 2.0E-5 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 Pfam PF00128 Alpha amylase, catalytic domain 196 285 1.6E-10 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 PANTHER PTHR10357:SF110 5 661 1.3E-241 T 20-04-2016 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 Gene3D G3DSA:2.60.40.10 42 137 6.5E-22 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 Gene3D G3DSA:3.20.20.80 163 556 1.6E-72 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS01045 416fb76a7a64065bd9741a1bd4845d55 662 PIRSF PIRSF000463 2 662 1.5E-169 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PIRSF PIRSF002869 1 502 4.4E-101 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206:SF90 16 24 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206:SF90 69 74 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206:SF90 487 496 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206:SF90 210 436 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PRINTS PR01806 Virulence factor MviN signature 351 370 1.2E-18 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PRINTS PR01806 Virulence factor MviN signature 403 420 1.2E-18 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PRINTS PR01806 Virulence factor MviN signature 31 50 1.2E-18 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PRINTS PR01806 Virulence factor MviN signature 253 279 1.2E-18 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PRINTS PR01806 Virulence factor MviN signature 128 152 1.2E-18 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PRINTS PR01806 Virulence factor MviN signature 152 173 1.2E-18 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 Pfam PF03023 MviN-like protein 26 462 4.3E-70 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 494 2.0E-83 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206 16 24 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206 69 74 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206 487 496 1.2E-28 T 20-04-2016 APRE_RS06455 f40ec938f08486817d87d591341f686a 507 PANTHER PTHR11206 210 436 1.2E-28 T 20-04-2016 APRE_RS01600 dcdc027c4da5fc5cef2e7c86b66f2ef9 194 PANTHER PTHR11019:SF4 1 190 8.3E-47 T 20-04-2016 APRE_RS01600 dcdc027c4da5fc5cef2e7c86b66f2ef9 194 PANTHER PTHR11019 1 190 8.3E-47 T 20-04-2016 APRE_RS01600 dcdc027c4da5fc5cef2e7c86b66f2ef9 194 Gene3D G3DSA:3.40.50.880 1 182 4.8E-52 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS01600 dcdc027c4da5fc5cef2e7c86b66f2ef9 194 Pfam PF01965 DJ-1/PfpI family 3 162 2.1E-41 T 20-04-2016 IPR002818 DJ-1/PfpI APRE_RS01600 dcdc027c4da5fc5cef2e7c86b66f2ef9 194 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 179 4.9E-45 T 20-04-2016 IPR006287 DJ-1 APRE_RS01600 dcdc027c4da5fc5cef2e7c86b66f2ef9 194 SUPERFAMILY SSF52317 1 180 1.74E-44 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APRE_RS04270 d160cf547020229035023b5aa657b036 341 PANTHER PTHR11228:SF26 20 203 1.8E-14 T 20-04-2016 APRE_RS04270 d160cf547020229035023b5aa657b036 341 PANTHER PTHR11228 20 203 1.8E-14 T 20-04-2016 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.6E-40 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.6E-40 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.6E-40 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.6E-40 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.6E-40 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.6E-40 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 Pfam PF00318 Ribosomal protein S2 9 224 6.0E-100 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 Gene3D G3DSA:1.10.287.610 100 152 1.2E-26 T 20-04-2016 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.5E-110 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 SUPERFAMILY SSF52313 6 238 4.19E-97 T 20-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 Gene3D G3DSA:3.40.50.10490 158 251 1.7E-69 T 20-04-2016 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 Gene3D G3DSA:3.40.50.10490 23 99 1.7E-69 T 20-04-2016 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 PANTHER PTHR12534 1 270 3.9E-123 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APRE_RS04890 9cf19bab9e7fff5fd51d9be60d580d7e 280 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 43.178 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 PANTHER PTHR24423:SF427 79 95 2.0E-19 T 20-04-2016 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 PANTHER PTHR24423:SF427 204 430 2.0E-19 T 20-04-2016 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 Gene3D G3DSA:3.30.565.10 322 427 3.7E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 SUPERFAMILY SSF47384 208 272 2.55E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 PANTHER PTHR24423 79 95 2.0E-19 T 20-04-2016 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 PANTHER PTHR24423 204 430 2.0E-19 T 20-04-2016 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 Gene3D G3DSA:1.10.287.130 222 273 6.7E-4 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 SMART SM00387 329 429 1.2E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 3.4E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 3.4E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 427 1.1E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03365 3b2c4e4a15f91e537459936a804c492c 430 SUPERFAMILY SSF55874 298 428 1.96E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 9 287 3.8E-67 T 20-04-2016 IPR003797 DegV APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 Gene3D G3DSA:3.40.50.10170 4 155 5.8E-31 T 20-04-2016 APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 Gene3D G3DSA:3.30.1180.10 163 289 2.7E-38 T 20-04-2016 APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 PANTHER PTHR33434 1 292 5.3E-53 T 20-04-2016 APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 PANTHER PTHR33434:SF3 1 292 5.3E-53 T 20-04-2016 APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 Pfam PF02645 Uncharacterised protein, DegV family COG1307 9 287 6.6E-58 T 20-04-2016 IPR003797 DegV APRE_RS05415 7bc3eec3ec2bf476ca3f681f7487baa4 294 SUPERFAMILY SSF82549 9 290 1.94E-65 T 20-04-2016 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 SUPERFAMILY SSF54364 16 89 5.62E-28 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 PANTHER PTHR10938:SF0 14 182 2.4E-56 T 20-04-2016 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 179 1.9E-31 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 PANTHER PTHR10938 14 182 2.4E-56 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 86 6.0E-31 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 Gene3D G3DSA:3.10.20.80 14 89 2.3E-34 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 181 27.753 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 Gene3D G3DSA:3.30.110.10 90 182 5.7E-32 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 ProSitePatterns PS00938 Initiation factor 3 signature. 69 82 - T 20-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 179 7.1E-60 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APRE_RS06890 c1a3b748a802217da17a562596047ce5 184 SUPERFAMILY SSF55200 95 181 3.4E-27 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PANTHER PTHR11405:SF44 1 275 8.5E-168 T 20-04-2016 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PANTHER PTHR11405:SF44 299 333 8.5E-168 T 20-04-2016 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 78.1 T 20-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 SUPERFAMILY SSF53671 4 333 4.45E-99 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 Gene3D G3DSA:3.40.50.1370 4 145 5.7E-55 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PANTHER PTHR11405 1 275 8.5E-168 T 20-04-2016 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PANTHER PTHR11405 299 333 8.5E-168 T 20-04-2016 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.0E-44 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 3.0E-123 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 331 1.1E-51 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 Gene3D G3DSA:3.40.50.1370 146 320 3.7E-67 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 8.4E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.4E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 8.4E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 4.5E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 4.5E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.5E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.5E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS00155 9a48dcef7de8e529d125d3f59d6fa48c 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.5E-31 T 20-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Gene3D G3DSA:1.10.1140.10 446 505 6.2E-23 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Gene3D G3DSA:1.10.1140.10 541 584 6.2E-23 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 PANTHER PTHR15184 131 136 3.5E-263 T 20-04-2016 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 1 585 51.269 T 20-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 84 201 2.7E-45 T 20-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 68 4.7E-14 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 PANTHER PTHR15184:SF7 181 581 3.5E-263 T 20-04-2016 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 PANTHER PTHR15184:SF7 2 93 3.5E-263 T 20-04-2016 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 PANTHER PTHR15184:SF7 131 136 3.5E-263 T 20-04-2016 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 SUPERFAMILY SSF47917 447 540 1.23E-21 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 PANTHER PTHR15184 181 581 3.5E-263 T 20-04-2016 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 PANTHER PTHR15184 2 93 3.5E-263 T 20-04-2016 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 SUPERFAMILY SSF52540 177 438 3.46E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 211 434 1.1E-94 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 Gene3D G3DSA:3.40.50.300 147 434 2.5E-105 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08630 70d7241bbd32a5adf04edf047d0e75ee 585 SUPERFAMILY SSF50615 2 71 4.32E-13 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 ProSitePatterns PS00756 Protein secY signature 2. 163 180 - T 20-04-2016 IPR030659 SecY conserved site APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 422 28.065 T 20-04-2016 IPR026593 Protein translocase subunit SecY APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 417 7.2E-113 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 ProSitePatterns PS00755 Protein secY signature 1. 71 90 - T 20-04-2016 IPR030659 SecY conserved site APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 170 193 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 111 134 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 304 326 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 359 377 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 262 281 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 144 169 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 70 90 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 391 409 2.32E-89 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 Pfam PF00344 SecY translocase 71 406 8.9E-108 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 Gene3D G3DSA:1.10.3370.10 2 423 2.0E-141 T 20-04-2016 IPR023201 SecY subunit domain APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PANTHER PTHR10906:SF2 1 424 3.5E-161 T 20-04-2016 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PANTHER PTHR10906 1 424 3.5E-161 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 PIRSF PIRSF004557 1 424 1.1E-118 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APRE_RS07970 74e564d6b870258f5deff279251c98bd 424 SUPERFAMILY SSF103491 3 413 3.14E-111 T 20-04-2016 IPR023201 SecY subunit domain APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 Pfam PF08402 TOBE domain 280 347 1.3E-4 T 20-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 Gene3D G3DSA:2.40.50.140 283 341 1.5E-9 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 SUPERFAMILY SSF52540 1 243 1.05E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 Pfam PF00005 ABC transporter 18 162 1.8E-35 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 PANTHER PTHR24220 3 310 5.1E-118 T 20-04-2016 APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 SUPERFAMILY SSF50331 238 355 3.97E-17 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 PANTHER PTHR24220:SF151 3 310 5.1E-118 T 20-04-2016 APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 SMART SM00382 27 212 2.8E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01395 448b1d1320d19ce8bad21d2ce83144de 356 Gene3D G3DSA:3.40.50.300 1 235 1.3E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 Pfam PF00588 SpoU rRNA Methylase family 86 225 4.0E-41 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 PANTHER PTHR12029 1 233 9.0E-70 T 20-04-2016 APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 230 5.0E-72 T 20-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 Gene3D G3DSA:3.30.1330.30 3 70 1.3E-11 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 SMART SM00967 3 75 7.1E-10 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 74 7.9E-12 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 Gene3D G3DSA:3.40.1280.10 81 231 2.3E-52 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 SUPERFAMILY SSF55315 2 71 3.65E-9 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APRE_RS08415 afd4383ce9045a1c757a19add70c2709 234 SUPERFAMILY SSF75217 63 232 4.25E-51 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APRE_RS07435 18272b2fc7eddc98c3b9f55403bbbba0 414 Pfam PF12686 Protein of unknown function (DUF3800) 5 334 2.7E-52 T 20-04-2016 IPR024524 Protein of unknown function DUF3800 APRE_RS01545 eade092c5080707868957f65330750f3 426 PIRSF PIRSF001434 1 424 6.5E-127 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APRE_RS01545 eade092c5080707868957f65330750f3 426 SUPERFAMILY SSF53383 7 421 1.73E-114 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS01545 eade092c5080707868957f65330750f3 426 Gene3D G3DSA:3.90.1150.10 288 423 8.9E-51 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS01545 eade092c5080707868957f65330750f3 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 420 1.4E-175 T 20-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APRE_RS01545 eade092c5080707868957f65330750f3 426 PANTHER PTHR11808 265 425 4.5E-193 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APRE_RS01545 eade092c5080707868957f65330750f3 426 PANTHER PTHR11808 6 235 4.5E-193 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APRE_RS01545 eade092c5080707868957f65330750f3 426 Gene3D G3DSA:3.40.640.10 6 285 2.3E-102 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS01545 eade092c5080707868957f65330750f3 426 PANTHER PTHR11808:SF37 265 425 4.5E-193 T 20-04-2016 APRE_RS01545 eade092c5080707868957f65330750f3 426 PANTHER PTHR11808:SF37 6 235 4.5E-193 T 20-04-2016 APRE_RS01545 eade092c5080707868957f65330750f3 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 420 9.3E-132 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 457 3.9E-128 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 Gene3D G3DSA:2.30.310.10 1 163 6.1E-59 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 PANTHER PTHR15239:SF1 1 415 3.5E-100 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 PANTHER PTHR15239:SF1 433 574 3.5E-100 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 PANTHER PTHR15239 1 415 3.5E-100 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 PANTHER PTHR15239 433 574 3.5E-100 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 Gene3D G3DSA:1.10.8.50 195 246 1.1E-4 T 20-04-2016 APRE_RS04920 fedd516bcda6bf0dedfaadc00b9a4fec 582 Pfam PF05670 Domain of unknown function (DUF814) 466 549 3.4E-23 T 20-04-2016 IPR008532 Domain of unknown function DUF814 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 Gene3D G3DSA:3.20.20.80 2 397 8.2E-69 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PANTHER PTHR10357 3 109 9.8E-145 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PANTHER PTHR10357 131 477 9.8E-145 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 Gene3D G3DSA:2.60.40.1180 398 479 2.2E-25 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PRINTS PR00110 Alpha-amylase signature 93 104 1.0E-5 T 20-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PRINTS PR00110 Alpha-amylase signature 320 332 1.0E-5 T 20-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 SMART SM00642 4 391 9.6E-52 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 Pfam PF00128 Alpha amylase, catalytic domain 31 374 7.3E-25 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 SUPERFAMILY SSF51445 4 374 4.84E-94 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PIRSF PIRSF001021 1 482 1.1E-190 T 20-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PANTHER PTHR10357:SF168 3 109 9.8E-145 T 20-04-2016 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 PANTHER PTHR10357:SF168 131 477 9.8E-145 T 20-04-2016 APRE_RS07885 23396a34ae45bfd9fe31a2223335e43b 483 SUPERFAMILY SSF51011 394 479 9.5E-22 T 20-04-2016 APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 SMART SM00226 5 131 2.9E-27 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 PANTHER PTHR11717 1 135 1.3E-35 T 20-04-2016 APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 128 1.7E-18 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 PANTHER PTHR11717:SF18 1 135 1.3E-35 T 20-04-2016 APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 Gene3D G3DSA:3.40.50.270 3 130 6.0E-37 T 20-04-2016 APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 7.2E-5 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 103 118 7.2E-5 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APRE_RS01930 ff51c403dcc028d4987acf16ab997d80 137 SUPERFAMILY SSF52788 6 129 6.28E-32 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APRE_RS03235 1c80e4ca04f11fb2697cf622064916d0 176 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 68 4.3E-17 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APRE_RS03235 1c80e4ca04f11fb2697cf622064916d0 176 PANTHER PTHR14269 1 167 7.9E-39 T 20-04-2016 APRE_RS03235 1c80e4ca04f11fb2697cf622064916d0 176 PIRSF PIRSF000847 1 176 7.6E-49 T 20-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APRE_RS03235 1c80e4ca04f11fb2697cf622064916d0 176 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 171 5.9E-49 T 20-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APRE_RS03235 1c80e4ca04f11fb2697cf622064916d0 176 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 46 68 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 PANTHER PTHR13691 1 276 1.5E-139 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 20-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 PIRSF PIRSF002158 4 277 1.1E-96 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 SMART SM01382 124 253 3.4E-87 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 Gene3D G3DSA:2.40.50.140 1 114 6.3E-53 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 2.2E-131 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 Gene3D G3DSA:2.30.30.30 118 195 1.8E-32 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 3.9E-34 T 20-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 SUPERFAMILY SSF50249 2 125 1.71E-51 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 SMART SM01383 42 118 2.9E-48 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 46.885 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 SUPERFAMILY SSF50104 127 273 1.02E-57 T 20-04-2016 IPR008991 Translation protein SH3-like domain APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 5.0E-53 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APRE_RS08055 01a74d6e25745e8eb31d87bea99c92aa 277 Gene3D G3DSA:4.10.950.10 196 274 1.2E-33 T 20-04-2016 IPR014726 Ribosomal protein L2, domain 3 APRE_RS01665 fcfdde4ca20f2c714858f86e371f3cbd 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 12 308 1.4E-99 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APRE_RS01665 fcfdde4ca20f2c714858f86e371f3cbd 309 SUPERFAMILY SSF56601 11 308 1.61E-90 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS01665 fcfdde4ca20f2c714858f86e371f3cbd 309 PANTHER PTHR12544 8 308 1.7E-112 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APRE_RS01665 fcfdde4ca20f2c714858f86e371f3cbd 309 Pfam PF04960 Glutaminase 26 308 2.3E-101 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APRE_RS01665 fcfdde4ca20f2c714858f86e371f3cbd 309 Hamap MF_00313 Glutaminase [glsA]. 8 308 38.192 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APRE_RS01665 fcfdde4ca20f2c714858f86e371f3cbd 309 Gene3D G3DSA:3.40.710.10 8 308 4.9E-107 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS03265 06db826d726a9d36b0951da2c5d2003d 189 Gene3D G3DSA:3.40.50.2020 3 185 3.2E-76 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS03265 06db826d726a9d36b0951da2c5d2003d 189 PANTHER PTHR22573 5 185 5.2E-71 T 20-04-2016 APRE_RS03265 06db826d726a9d36b0951da2c5d2003d 189 Pfam PF00156 Phosphoribosyl transferase domain 18 165 6.2E-29 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APRE_RS03265 06db826d726a9d36b0951da2c5d2003d 189 PANTHER PTHR22573:SF56 5 185 5.2E-71 T 20-04-2016 APRE_RS03265 06db826d726a9d36b0951da2c5d2003d 189 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 12 178 6.2E-67 T 20-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 APRE_RS03265 06db826d726a9d36b0951da2c5d2003d 189 SUPERFAMILY SSF53271 3 183 1.57E-56 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS07375 dba271d08d6bf56ae909b9742fd2dcb3 159 SUPERFAMILY SSF53218 2 153 4.32E-47 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07375 dba271d08d6bf56ae909b9742fd2dcb3 159 SMART SM00852 6 149 2.8E-28 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07375 dba271d08d6bf56ae909b9742fd2dcb3 159 PANTHER PTHR10192 1 159 6.3E-70 T 20-04-2016 APRE_RS07375 dba271d08d6bf56ae909b9742fd2dcb3 159 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 142 3.7E-37 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07375 dba271d08d6bf56ae909b9742fd2dcb3 159 Gene3D G3DSA:3.40.980.10 3 155 1.0E-55 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07375 dba271d08d6bf56ae909b9742fd2dcb3 159 Pfam PF00994 Probable molybdopterin binding domain 6 148 3.7E-37 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS00215 0d03e42e90e92b253b9491593f976bc5 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 270 1.8E-27 T 20-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APRE_RS00215 0d03e42e90e92b253b9491593f976bc5 289 PANTHER PTHR32196 7 285 2.9E-80 T 20-04-2016 APRE_RS00215 0d03e42e90e92b253b9491593f976bc5 289 PANTHER PTHR32196:SF27 7 285 2.9E-80 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 Pfam PF08984 Domain of unknown function (DUF1858) 3 56 7.0E-15 T 20-04-2016 IPR015077 Domain of unknown function DUF1858 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 SUPERFAMILY SSF140683 1 71 1.96E-15 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 Gene3D G3DSA:3.30.450.20 326 421 5.6E-7 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 Gene3D G3DSA:1.10.3910.10 1 71 8.3E-24 T 20-04-2016 IPR015077 Domain of unknown function DUF1858 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 Gene3D G3DSA:1.20.120.520 174 325 4.7E-32 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 PANTHER PTHR24423 245 268 8.6E-20 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 PANTHER PTHR24423 289 425 8.6E-20 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 Pfam PF04282 Family of unknown function (DUF438) 85 149 1.3E-25 T 20-04-2016 IPR007380 Domain of unknown function DUF438 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 PANTHER PTHR24423:SF558 245 268 8.6E-20 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 PANTHER PTHR24423:SF558 289 425 8.6E-20 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 Pfam PF13596 PAS domain 321 425 2.6E-27 T 20-04-2016 APRE_RS00050 49f81f62b787bc2041a378281c2423a2 434 SUPERFAMILY SSF55785 316 422 3.62E-8 T 20-04-2016 IPR000014 PAS domain APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 20-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 410 49.724 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 PANTHER PTHR11680 6 410 4.5E-229 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 Pfam PF00464 Serine hydroxymethyltransferase 6 382 6.9E-163 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 Gene3D G3DSA:3.90.1150.10 266 409 1.1E-59 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 PIRSF PIRSF000412 1 413 6.8E-163 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 SUPERFAMILY SSF53383 2 410 1.73E-168 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS04680 9a5f4063e47f7797d7e3472aa6a6a865 413 Gene3D G3DSA:3.40.640.10 35 265 1.3E-94 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS08285 86c20e441601b7bbe902f688a2b4a897 316 Gene3D G3DSA:3.40.50.2300 167 316 1.0E-55 T 20-04-2016 APRE_RS08285 86c20e441601b7bbe902f688a2b4a897 316 Pfam PF13407 Periplasmic binding protein domain 52 302 1.8E-72 T 20-04-2016 IPR025997 Periplasmic binding protein APRE_RS08285 86c20e441601b7bbe902f688a2b4a897 316 Gene3D G3DSA:3.40.50.2300 46 166 5.7E-43 T 20-04-2016 APRE_RS08285 86c20e441601b7bbe902f688a2b4a897 316 SUPERFAMILY SSF53822 49 316 3.6E-92 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS08285 86c20e441601b7bbe902f688a2b4a897 316 PANTHER PTHR32196:SF9 1 314 4.9E-100 T 20-04-2016 APRE_RS08285 86c20e441601b7bbe902f688a2b4a897 316 PANTHER PTHR32196 1 314 4.9E-100 T 20-04-2016 APRE_RS06065 3a619fccdc859a42ce25231aa93b0f57 106 Pfam PF14898 Domain of unknown function (DUF4491) 1 91 3.7E-37 T 20-04-2016 IPR027890 Protein of unknown function DUF4491 APRE_RS04460 11cc22c711d7e06d9112e555cb080146 756 PANTHER PTHR11468 4 734 5.0E-66 T 20-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS04460 11cc22c711d7e06d9112e555cb080146 756 PANTHER PTHR11468:SF3 4 734 5.0E-66 T 20-04-2016 APRE_RS04460 11cc22c711d7e06d9112e555cb080146 756 Gene3D G3DSA:3.40.50.2000 6 371 3.1E-78 T 20-04-2016 APRE_RS04460 11cc22c711d7e06d9112e555cb080146 756 Gene3D G3DSA:3.40.50.2000 450 740 1.1E-53 T 20-04-2016 APRE_RS04460 11cc22c711d7e06d9112e555cb080146 756 Pfam PF00343 Carbohydrate phosphorylase 95 745 3.2E-105 T 20-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS04460 11cc22c711d7e06d9112e555cb080146 756 SUPERFAMILY SSF53756 8 745 3.53E-110 T 20-04-2016 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 Pfam PF00085 Thioredoxin 3 98 1.9E-24 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 PIRSF PIRSF000077 1 100 1.8E-29 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 PANTHER PTHR10438 8 99 9.9E-30 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 PRINTS PR00421 Thioredoxin family signature 64 75 9.0E-7 T 20-04-2016 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 PRINTS PR00421 Thioredoxin family signature 20 28 9.0E-7 T 20-04-2016 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 PRINTS PR00421 Thioredoxin family signature 28 37 9.0E-7 T 20-04-2016 APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 Gene3D G3DSA:3.40.30.10 2 99 1.9E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS08785 e4efbf42046f7e1ef90533518f9d3f64 100 SUPERFAMILY SSF52833 2 99 1.09E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 473 27.259 T 20-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 PANTHER PTHR23135:SF4 10 475 8.2E-122 T 20-04-2016 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Gene3D G3DSA:3.40.1390.10 8 96 1.6E-20 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Pfam PF08245 Mur ligase middle domain 108 300 4.9E-44 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 SUPERFAMILY SSF63418 4 99 3.53E-19 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 PANTHER PTHR23135 10 475 8.2E-122 T 20-04-2016 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 473 5.1E-116 T 20-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Pfam PF01225 Mur ligase family, catalytic domain 23 93 4.1E-8 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Gene3D G3DSA:3.40.1190.10 99 324 1.5E-63 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Gene3D G3DSA:3.90.190.20 325 467 6.1E-27 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 SUPERFAMILY SSF53244 321 474 2.29E-23 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 396 6.9E-10 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS07730 0b3949dbc59406c926350c8514b825ee 476 SUPERFAMILY SSF53623 99 320 4.58E-58 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS02115 bc56ad92652e3de1aadc85b5bc9b8fbf 437 PANTHER PTHR11119:SF9 1 424 2.1E-163 T 20-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APRE_RS02115 bc56ad92652e3de1aadc85b5bc9b8fbf 437 Pfam PF00860 Permease family 22 396 2.1E-41 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS02115 bc56ad92652e3de1aadc85b5bc9b8fbf 437 PIRSF PIRSF005353 1 436 9.3E-176 T 20-04-2016 IPR026033 Purine permease PbuG-like APRE_RS02115 bc56ad92652e3de1aadc85b5bc9b8fbf 437 PANTHER PTHR11119 1 424 2.1E-163 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 SUPERFAMILY SSF55252 80 148 2.62E-10 T 20-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 Gene3D G3DSA:3.30.1360.40 78 150 1.2E-16 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 Pfam PF02863 Arginine repressor, C-terminal domain 80 146 1.8E-15 T 20-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 Pfam PF01316 Arginine repressor, DNA binding domain 1 66 1.2E-22 T 20-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 Hamap MF_00173 Arginine repressor [argR]. 1 150 46.595 T 20-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.9E-14 T 20-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.9E-14 T 20-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.9E-14 T 20-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.9E-14 T 20-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 PANTHER PTHR34471:SF1 1 150 1.1E-33 T 20-04-2016 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 Gene3D G3DSA:1.10.10.10 9 65 5.8E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 PANTHER PTHR34471 1 150 1.1E-33 T 20-04-2016 APRE_RS05250 ca5a6ab41a696093d16ae1fe020894b7 150 SUPERFAMILY SSF46785 1 66 4.25E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 PANTHER PTHR11831:SF4 1 197 5.9E-65 T 20-04-2016 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 Gene3D G3DSA:3.10.290.10 92 188 1.4E-28 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 197 30.113 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 34 197 1.4E-62 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 86 1.6E-21 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 Pfam PF01479 S4 domain 87 134 7.9E-20 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 SUPERFAMILY SSF55174 6 197 2.88E-59 T 20-04-2016 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 PANTHER PTHR11831 1 197 5.9E-65 T 20-04-2016 IPR022801 Ribosomal protein S4/S9 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 SMART SM00363 87 150 6.6E-18 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 Gene3D G3DSA:1.10.1050.10 38 91 1.2E-29 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APRE_RS07940 d5c47f4e240595ec038f8351e08576d9 197 SMART SM01390 3 86 2.7E-29 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APRE_RS04125 813d48996e16a1f7b6d4d0d98ca4b57b 67 SUPERFAMILY SSF47413 4 66 5.09E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS04125 813d48996e16a1f7b6d4d0d98ca4b57b 67 Gene3D G3DSA:1.10.260.40 5 65 4.5E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS04125 813d48996e16a1f7b6d4d0d98ca4b57b 67 Pfam PF01381 Helix-turn-helix 10 63 7.7E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS04125 813d48996e16a1f7b6d4d0d98ca4b57b 67 PANTHER PTHR10245 3 65 3.1E-15 T 20-04-2016 APRE_RS04125 813d48996e16a1f7b6d4d0d98ca4b57b 67 SMART SM00530 9 64 1.9E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS03315 2d0e7affbedfb8601fba92039006482f 320 PANTHER PTHR30472 11 319 3.5E-138 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APRE_RS03315 2d0e7affbedfb8601fba92039006482f 320 PANTHER PTHR30472:SF27 11 319 3.5E-138 T 20-04-2016 APRE_RS03315 2d0e7affbedfb8601fba92039006482f 320 Gene3D G3DSA:1.10.3470.10 13 318 6.7E-63 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS03315 2d0e7affbedfb8601fba92039006482f 320 Pfam PF01032 FecCD transport family 16 315 7.2E-62 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APRE_RS03315 2d0e7affbedfb8601fba92039006482f 320 SUPERFAMILY SSF81345 13 315 4.18E-60 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS01705 6ce59908415ea4938db27f01815f9642 181 Pfam PF07155 ECF-type riboflavin transporter, S component 5 174 3.1E-29 T 20-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 APRE_RS01705 6ce59908415ea4938db27f01815f9642 181 PANTHER PTHR37815:SF1 1 177 5.9E-16 T 20-04-2016 APRE_RS01705 6ce59908415ea4938db27f01815f9642 181 PANTHER PTHR37815 1 177 5.9E-16 T 20-04-2016 APRE_RS00735 73fbba54805901d73f84b8445b4a8e80 333 PANTHER PTHR30193 12 333 8.3E-112 T 20-04-2016 APRE_RS00735 73fbba54805901d73f84b8445b4a8e80 333 SUPERFAMILY SSF161098 86 316 9.68E-51 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00735 73fbba54805901d73f84b8445b4a8e80 333 PANTHER PTHR30193:SF19 12 333 8.3E-112 T 20-04-2016 APRE_RS00735 73fbba54805901d73f84b8445b4a8e80 333 Gene3D G3DSA:1.10.3720.10 93 325 5.9E-48 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00735 73fbba54805901d73f84b8445b4a8e80 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 261 5.8E-15 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07105 555eb5732ef89420b5b4d41e481fe4c0 340 PIRSF PIRSF006470 1 324 7.3E-73 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APRE_RS07105 555eb5732ef89420b5b4d41e481fe4c0 340 PANTHER PTHR33376:SF2 1 337 1.9E-79 T 20-04-2016 APRE_RS07105 555eb5732ef89420b5b4d41e481fe4c0 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 317 1.2E-71 T 20-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APRE_RS07105 555eb5732ef89420b5b4d41e481fe4c0 340 PANTHER PTHR33376 1 337 1.9E-79 T 20-04-2016 APRE_RS07105 555eb5732ef89420b5b4d41e481fe4c0 340 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 278 2.4E-57 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 PANTHER PTHR11468:SF3 1 792 0.0 T 20-04-2016 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 SUPERFAMILY SSF53756 5 790 7.85E-283 T 20-04-2016 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 6 790 0.0 T 20-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 Pfam PF00343 Carbohydrate phosphorylase 92 790 1.6E-297 T 20-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 PIRSF PIRSF000460 1 793 6.2E-214 T 20-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 Gene3D G3DSA:3.40.50.2000 455 775 1.4E-129 T 20-04-2016 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 Gene3D G3DSA:3.40.50.2000 4 454 3.7E-173 T 20-04-2016 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 630 642 - T 20-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS02220 0e71cf925bf01b7300f34c2b8a85c929 793 PANTHER PTHR11468 1 792 0.0 T 20-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 Pfam PF01207 Dihydrouridine synthase (Dus) 11 313 9.4E-82 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 PANTHER PTHR11082 8 322 2.1E-110 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 5 317 1.9E-95 T 20-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 Gene3D G3DSA:3.20.20.70 8 246 2.4E-72 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 PANTHER PTHR11082:SF25 8 322 2.1E-110 T 20-04-2016 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 Gene3D G3DSA:1.10.1200.80 251 322 8.2E-22 T 20-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 SUPERFAMILY SSF51395 8 317 9.52E-79 T 20-04-2016 APRE_RS03280 6afab1de7f2ebf533fedc1b10712b074 326 PIRSF PIRSF006621 1 322 5.7E-97 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APRE_RS07075 cc68f158b605a667ea296214ba87302c 270 SUPERFAMILY SSF161098 5 264 2.62E-36 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07075 cc68f158b605a667ea296214ba87302c 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 261 5.1E-22 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07075 cc68f158b605a667ea296214ba87302c 270 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 4 267 1.5E-71 T 20-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APRE_RS07075 cc68f158b605a667ea296214ba87302c 270 Gene3D G3DSA:1.10.3720.10 50 268 9.9E-42 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07075 cc68f158b605a667ea296214ba87302c 270 PANTHER PTHR30425 1 268 3.4E-74 T 20-04-2016 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 Gene3D G3DSA:3.40.50.1360 75 213 3.6E-13 T 20-04-2016 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 SUPERFAMILY SSF100950 74 225 7.95E-27 T 20-04-2016 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 PANTHER PTHR30363:SF4 1 225 8.0E-66 T 20-04-2016 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 Gene3D G3DSA:1.10.10.10 4 59 2.9E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 Pfam PF00455 DeoR C terminal sensor domain 75 225 2.8E-38 T 20-04-2016 IPR014036 DeoR C-terminal sensor domain APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 SMART SM00420 6 58 5.9E-13 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 PANTHER PTHR30363 1 225 8.0E-66 T 20-04-2016 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 SUPERFAMILY SSF46785 4 59 3.26E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.2E-14 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 20-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 SMART SM01134 72 229 2.6E-43 T 20-04-2016 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.9E-8 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS02055 b65791d46ac63590078fab8bc0666352 229 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.9E-8 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS07595 09ebf5751f5ac7789136c5f623fc316f 233 Gene3D G3DSA:3.40.50.300 2 217 2.4E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07595 09ebf5751f5ac7789136c5f623fc316f 233 PANTHER PTHR24220:SF530 6 227 2.9E-75 T 20-04-2016 APRE_RS07595 09ebf5751f5ac7789136c5f623fc316f 233 PANTHER PTHR24220 6 227 2.9E-75 T 20-04-2016 APRE_RS07595 09ebf5751f5ac7789136c5f623fc316f 233 Pfam PF00005 ABC transporter 21 155 8.4E-25 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07595 09ebf5751f5ac7789136c5f623fc316f 233 SUPERFAMILY SSF52540 4 211 6.18E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07595 09ebf5751f5ac7789136c5f623fc316f 233 SMART SM00382 29 204 3.6E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08225 6c9e3df6232b5b7b10ef9672c4572ac2 183 Pfam PF02417 Chromate transporter 4 176 7.8E-44 T 20-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 APRE_RS08225 6c9e3df6232b5b7b10ef9672c4572ac2 183 PANTHER PTHR33567 2 183 7.9E-47 T 20-04-2016 APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 PANTHER PTHR10000 1 277 8.2E-51 T 20-04-2016 APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 241 1.9E-21 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 SUPERFAMILY SSF56784 1 267 5.17E-57 T 20-04-2016 IPR023214 HAD-like domain APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 2.8E-52 T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 Gene3D G3DSA:3.30.1240.10 83 187 6.8E-6 T 20-04-2016 APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 265 1.6E-56 T 20-04-2016 IPR023214 HAD-like domain APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 Gene3D G3DSA:3.40.50.1000 1 72 2.4E-43 T 20-04-2016 IPR023214 HAD-like domain APRE_RS03940 8227ba54eb9dc45a6dc933743173779c 277 Gene3D G3DSA:3.40.50.1000 188 269 2.4E-43 T 20-04-2016 IPR023214 HAD-like domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Gene3D G3DSA:3.30.1600.10 124 167 4.8E-26 T 20-04-2016 IPR026591 Sirtuin family, catalytic core small domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Gene3D G3DSA:3.30.1600.10 33 75 4.8E-26 T 20-04-2016 IPR026591 Sirtuin family, catalytic core small domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 PANTHER PTHR11085 4 244 1.9E-86 T 20-04-2016 IPR003000 Sirtuin family GO:0070403 APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Pfam PF02146 Sir2 family 22 198 1.6E-52 T 20-04-2016 IPR003000 Sirtuin family GO:0070403 APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Gene3D G3DSA:3.40.50.1220 86 123 9.2E-49 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Gene3D G3DSA:3.40.50.1220 174 244 9.2E-49 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Gene3D G3DSA:3.40.50.1220 2 32 9.2E-49 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 SUPERFAMILY SSF52467 2 244 5.67E-82 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APRE_RS07585 ce0e7c467d832e86eb3acab7b6ddd457 246 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 6 241 59.474 T 20-04-2016 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 APRE_RS06575 1615938f873e0e2d6ca23e250a87442b 238 Gene3D G3DSA:3.40.50.300 3 225 3.3E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06575 1615938f873e0e2d6ca23e250a87442b 238 SUPERFAMILY SSF52540 3 220 4.67E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06575 1615938f873e0e2d6ca23e250a87442b 238 SMART SM00382 29 213 6.1E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06575 1615938f873e0e2d6ca23e250a87442b 238 PANTHER PTHR24220 4 213 4.8E-48 T 20-04-2016 APRE_RS06575 1615938f873e0e2d6ca23e250a87442b 238 Pfam PF00005 ABC transporter 25 163 3.9E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03930 b16f1207b4ff3caac84c64947441b685 388 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 13 361 6.7E-106 T 20-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APRE_RS03930 b16f1207b4ff3caac84c64947441b685 388 PANTHER PTHR30474:SF1 1 378 2.7E-130 T 20-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APRE_RS03930 b16f1207b4ff3caac84c64947441b685 388 Pfam PF01098 Cell cycle protein 16 362 2.4E-89 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APRE_RS03930 b16f1207b4ff3caac84c64947441b685 388 PANTHER PTHR30474 1 378 2.7E-130 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 Gene3D G3DSA:3.40.50.10750 138 298 5.1E-61 T 20-04-2016 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 20 322 2.2E-106 T 20-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 PIRSF PIRSF000428 1 327 9.9E-103 T 20-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 PANTHER PTHR23406:SF3 229 327 1.4E-50 T 20-04-2016 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 Pfam PF01515 Phosphate acetyl/butaryl transferase 9 322 2.9E-113 T 20-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 PANTHER PTHR23406 229 327 1.4E-50 T 20-04-2016 APRE_RS08800 7a59191451a9165c56bd10a03dfef745 327 SUPERFAMILY SSF53659 8 325 1.44E-87 T 20-04-2016 APRE_RS01295 c809fe20eadf9da5957e9300969d8f44 263 PANTHER PTHR13754 3 259 4.2E-74 T 20-04-2016 APRE_RS01295 c809fe20eadf9da5957e9300969d8f44 263 SUPERFAMILY SSF56281 4 230 2.92E-41 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS01295 c809fe20eadf9da5957e9300969d8f44 263 Pfam PF00753 Metallo-beta-lactamase superfamily 11 217 9.2E-24 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS01295 c809fe20eadf9da5957e9300969d8f44 263 Gene3D G3DSA:3.60.15.10 9 232 3.7E-36 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS01295 c809fe20eadf9da5957e9300969d8f44 263 SMART SM00849 12 217 1.7E-12 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS01295 c809fe20eadf9da5957e9300969d8f44 263 PANTHER PTHR13754:SF15 3 259 4.2E-74 T 20-04-2016 APRE_RS03035 af714b0af61cb7f5310a1a960ef3c10d 91 Pfam PF06961 Protein of unknown function (DUF1294) 13 68 1.8E-17 T 20-04-2016 IPR010718 Protein of unknown function DUF1294 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PANTHER PTHR30330 1 470 4.0E-165 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PANTHER PTHR30330:SF3 1 470 4.0E-165 T 20-04-2016 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 Pfam PF01235 Sodium:alanine symporter family 52 459 4.2E-108 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 455 3.0E-110 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PRINTS PR00175 Sodium/alanine symporter signature 91 113 4.5E-44 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PRINTS PR00175 Sodium/alanine symporter signature 314 332 4.5E-44 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PRINTS PR00175 Sodium/alanine symporter signature 219 238 4.5E-44 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PRINTS PR00175 Sodium/alanine symporter signature 191 209 4.5E-44 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PRINTS PR00175 Sodium/alanine symporter signature 365 387 4.5E-44 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00140 3b133ce7c6cd02cc6d311f322df61cb4 470 PRINTS PR00175 Sodium/alanine symporter signature 424 444 4.5E-44 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00225 d6221c2ad6bc096bc17b3e4b3a171935 142 Gene3D G3DSA:1.10.10.10 14 66 2.5E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00225 d6221c2ad6bc096bc17b3e4b3a171935 142 SMART SM00418 11 90 2.1E-6 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS00225 d6221c2ad6bc096bc17b3e4b3a171935 142 SUPERFAMILY SSF46785 1 97 4.15E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00225 d6221c2ad6bc096bc17b3e4b3a171935 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.5E-5 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS00225 d6221c2ad6bc096bc17b3e4b3a171935 142 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.5E-5 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS00225 d6221c2ad6bc096bc17b3e4b3a171935 142 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 1.9E-12 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS06735 552f0293d6f284bd650faf13fc0a0abf 218 Gene3D G3DSA:1.10.530.10 39 192 2.0E-44 T 20-04-2016 APRE_RS06735 552f0293d6f284bd650faf13fc0a0abf 218 Pfam PF01464 Transglycosylase SLT domain 45 149 6.4E-24 T 20-04-2016 IPR008258 Transglycosylase SLT domain 1 APRE_RS06735 552f0293d6f284bd650faf13fc0a0abf 218 PANTHER PTHR21666 23 181 2.1E-32 T 20-04-2016 APRE_RS06735 552f0293d6f284bd650faf13fc0a0abf 218 SUPERFAMILY SSF53955 40 191 1.94E-39 T 20-04-2016 IPR023346 Lysozyme-like domain APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 Gene3D G3DSA:3.90.100.10 362 433 3.4E-17 T 20-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 PANTHER PTHR11751 1 350 3.2E-39 T 20-04-2016 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 Gene3D G3DSA:3.40.640.10 2 253 1.8E-63 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 Gene3D G3DSA:3.90.1150.10 289 358 2.1E-4 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 SUPERFAMILY SSF53383 14 349 2.99E-52 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 375 425 3.0E-6 T 20-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 PANTHER PTHR11751:SF360 1 350 3.2E-39 T 20-04-2016 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 8 252 2.0E-25 T 20-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APRE_RS05140 449e6f2fd6ba9defa265dca948c6b272 445 SUPERFAMILY SSF55904 310 432 3.79E-19 T 20-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 Gene3D G3DSA:3.40.50.300 3 253 1.1E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 Pfam PF00005 ABC transporter 29 178 6.7E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 PANTHER PTHR24220 6 257 2.1E-95 T 20-04-2016 APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 SMART SM00382 38 228 7.4E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 PANTHER PTHR24220:SF529 6 257 2.1E-95 T 20-04-2016 APRE_RS02105 27efe5dfd723b1cf2b64cbfa1dd69d80 257 SUPERFAMILY SSF52540 4 250 2.46E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00460 c875366712c171152766720f52b291b2 285 Pfam PF00037 4Fe-4S binding domain 257 274 1.5E-4 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS00460 c875366712c171152766720f52b291b2 285 Pfam PF12801 4Fe-4S binding domain 57 67 100.0 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS00460 c875366712c171152766720f52b291b2 285 Pfam PF12801 4Fe-4S binding domain 78 116 2.1E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS00460 c875366712c171152766720f52b291b2 285 Pfam PF12801 4Fe-4S binding domain 149 162 0.06 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS00460 c875366712c171152766720f52b291b2 285 Pfam PF12801 4Fe-4S binding domain 187 220 2.7E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS00460 c875366712c171152766720f52b291b2 285 PANTHER PTHR30176:SF2 80 284 5.7E-28 T 20-04-2016 APRE_RS00460 c875366712c171152766720f52b291b2 285 PANTHER PTHR30176 80 284 5.7E-28 T 20-04-2016 APRE_RS00460 c875366712c171152766720f52b291b2 285 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS00460 c875366712c171152766720f52b291b2 285 Gene3D G3DSA:3.30.70.20 205 237 3.8E-7 T 20-04-2016 APRE_RS00460 c875366712c171152766720f52b291b2 285 Gene3D G3DSA:3.30.70.20 238 280 5.1E-9 T 20-04-2016 APRE_RS00460 c875366712c171152766720f52b291b2 285 SUPERFAMILY SSF54862 82 104 8.98E-20 T 20-04-2016 APRE_RS00460 c875366712c171152766720f52b291b2 285 SUPERFAMILY SSF54862 145 274 8.98E-20 T 20-04-2016 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PRINTS PR00175 Sodium/alanine symporter signature 89 111 2.9E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PRINTS PR00175 Sodium/alanine symporter signature 347 369 2.9E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PRINTS PR00175 Sodium/alanine symporter signature 302 320 2.9E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PRINTS PR00175 Sodium/alanine symporter signature 211 230 2.9E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.9E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PRINTS PR00175 Sodium/alanine symporter signature 183 201 2.9E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 Pfam PF01235 Sodium:alanine symporter family 51 453 8.4E-149 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 441 2.0E-137 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PANTHER PTHR30330 1 465 1.1E-186 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS00510 7dae1d947fef37bdd44b56f5b651880e 468 PANTHER PTHR30330:SF1 1 465 1.1E-186 T 20-04-2016 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 SUPERFAMILY SSF81923 4 155 1.44E-32 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 4.7E-5 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 5.1E-7 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 2.7E-15 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 SUPERFAMILY SSF52540 544 851 5.18E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Gene3D G3DSA:1.10.1780.10 1 147 2.4E-38 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 4.9E-21 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Gene3D G3DSA:1.10.8.60 342 426 2.5E-34 T 20-04-2016 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Gene3D G3DSA:1.10.8.60 778 854 4.4E-25 T 20-04-2016 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 SMART SM01086 766 856 6.6E-27 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 2.7E-42 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 2.7E-42 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 2.7E-42 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 2.7E-42 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 760 4.4E-57 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Gene3D G3DSA:3.40.50.300 159 341 2.9E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 SUPERFAMILY SSF52540 157 542 1.41E-96 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 PANTHER PTHR11638 1 859 0.0 T 20-04-2016 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 SMART SM00382 595 739 3.3E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 SMART SM00382 197 342 3.5E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 20-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 PANTHER PTHR11638:SF18 1 859 0.0 T 20-04-2016 APRE_RS05120 6e6ee911e0097782da8334e8b08d4698 859 Gene3D G3DSA:3.40.50.300 548 777 1.3E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 40.704 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 SUPERFAMILY SSF48592 6 133 2.82E-78 T 20-04-2016 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 SUPERFAMILY SSF48592 404 520 2.82E-78 T 20-04-2016 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 SUPERFAMILY SSF52029 182 374 5.83E-84 T 20-04-2016 IPR027409 GroEL-like apical domain APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 20-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 2.3E-103 T 20-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 Gene3D G3DSA:1.10.560.10 3 194 8.2E-46 T 20-04-2016 IPR027413 GroEL-like equatorial domain APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 SUPERFAMILY SSF54849 136 204 7.1E-24 T 20-04-2016 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 1.5E-251 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 Gene3D G3DSA:3.50.7.10 195 368 4.9E-95 T 20-04-2016 IPR027409 GroEL-like apical domain APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 PANTHER PTHR11353 1 539 3.3E-229 T 20-04-2016 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 Gene3D G3DSA:1.10.560.10 369 517 8.9E-42 T 20-04-2016 IPR027413 GroEL-like equatorial domain APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 PRINTS PR00298 60kDa chaperonin signature 396 417 2.0E-71 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 PRINTS PR00298 60kDa chaperonin signature 348 373 2.0E-71 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 PRINTS PR00298 60kDa chaperonin signature 26 52 2.0E-71 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 PRINTS PR00298 60kDa chaperonin signature 82 109 2.0E-71 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS07700 f5e7d9071a82e5d93afd576d1f377d3a 540 PRINTS PR00298 60kDa chaperonin signature 266 289 2.0E-71 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APRE_RS02305 e3429189652465b1d24598893e801825 148 PIRSF PIRSF006019 1 148 1.8E-52 T 20-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 APRE_RS02305 e3429189652465b1d24598893e801825 148 Gene3D G3DSA:3.40.140.10 7 143 5.3E-39 T 20-04-2016 APRE_RS02305 e3429189652465b1d24598893e801825 148 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 119 1.4E-28 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APRE_RS02305 e3429189652465b1d24598893e801825 148 PANTHER PTHR11086 3 142 3.2E-49 T 20-04-2016 IPR015517 Deoxycytidylate deaminase-related APRE_RS02305 e3429189652465b1d24598893e801825 148 SUPERFAMILY SSF53927 10 142 2.51E-39 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APRE_RS02305 e3429189652465b1d24598893e801825 148 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 73 108 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 PANTHER PTHR33434 1 522 3.5E-153 T 20-04-2016 APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 SMART SM01120 34 199 7.2E-56 T 20-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 Pfam PF02734 DAK2 domain 34 198 1.1E-37 T 20-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 SUPERFAMILY SSF101473 4 201 7.59E-43 T 20-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 9 522 5.8E-161 T 20-04-2016 IPR019986 DAK2 domain-containing protein YloV APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 PANTHER PTHR33434:SF4 1 522 3.5E-153 T 20-04-2016 APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 SMART SM01121 219 522 2.8E-88 T 20-04-2016 IPR033470 Uncharacterised protein, DhaK domain APRE_RS05310 be25ab6da2b83c9c12d244fe266e7b45 522 Pfam PF13684 Dihydroxyacetone kinase family 221 522 2.5E-80 T 20-04-2016 IPR033470 Uncharacterised protein, DhaK domain APRE_RS02295 1b0192cee8f17d0b9b557768ff877fac 289 Gene3D G3DSA:3.40.50.300 2 209 1.1E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02295 1b0192cee8f17d0b9b557768ff877fac 289 PANTHER PTHR24220:SF573 4 200 7.7E-41 T 20-04-2016 APRE_RS02295 1b0192cee8f17d0b9b557768ff877fac 289 SUPERFAMILY SSF52540 3 207 1.78E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02295 1b0192cee8f17d0b9b557768ff877fac 289 SMART SM00382 27 204 1.1E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02295 1b0192cee8f17d0b9b557768ff877fac 289 PANTHER PTHR24220 4 200 7.7E-41 T 20-04-2016 APRE_RS02295 1b0192cee8f17d0b9b557768ff877fac 289 Pfam PF00005 ABC transporter 18 153 3.0E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07685 a561a5b6bb1a0dc3583ecdb8c52c8e8c 168 Gene3D G3DSA:3.40.630.30 1 168 1.1E-39 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS07685 a561a5b6bb1a0dc3583ecdb8c52c8e8c 168 Pfam PF00583 Acetyltransferase (GNAT) family 58 145 6.4E-5 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS07685 a561a5b6bb1a0dc3583ecdb8c52c8e8c 168 SUPERFAMILY SSF55729 1 168 9.17E-17 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 PANTHER PTHR30349:SF20 64 351 2.3E-40 T 20-04-2016 APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 SUPERFAMILY SSF56349 64 352 9.71E-62 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 Pfam PF00589 Phage integrase family 173 344 3.5E-27 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 Pfam PF14657 AP2-like DNA-binding integrase domain 14 49 5.2E-11 T 20-04-2016 IPR028259 AP2-like integrase, N-terminal domain APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 64 117 4.5E-17 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 PANTHER PTHR30349 64 351 2.3E-40 T 20-04-2016 APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 Gene3D G3DSA:1.10.443.10 171 351 2.5E-39 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APRE_RS04110 6a927e90221480c347124bf1dd1ace26 362 Gene3D G3DSA:1.10.150.130 64 162 4.3E-14 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APRE_RS07570 ee3760dd36ca563943623e3912a951f0 318 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 39 245 2.1E-46 T 20-04-2016 IPR003740 Uncharacterised membrane protein YitT APRE_RS07570 ee3760dd36ca563943623e3912a951f0 318 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 251 305 3.1E-15 T 20-04-2016 IPR019264 Domain of unknown function DUF2179 APRE_RS07570 ee3760dd36ca563943623e3912a951f0 318 PANTHER PTHR33545 21 314 4.1E-59 T 20-04-2016 APRE_RS07570 ee3760dd36ca563943623e3912a951f0 318 PIRSF PIRSF006483 22 312 7.3E-60 T 20-04-2016 IPR003740 Uncharacterised membrane protein YitT APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 SUPERFAMILY SSF53613 10 270 3.27E-44 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PANTHER PTHR20857 11 271 1.9E-59 T 20-04-2016 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 1.0E-23 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 1.0E-23 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 171 188 1.0E-23 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 1.0E-23 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 1.0E-23 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 120 134 1.0E-23 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 263 25.848 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PANTHER PTHR20857:SF19 11 271 1.9E-59 T 20-04-2016 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 Pfam PF02110 Hydroxyethylthiazole kinase family 12 260 1.9E-55 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 PIRSF PIRSF000513 6 271 5.1E-70 T 20-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08340 3576355d9b877e9a4f2a249e480bfa22 273 Gene3D G3DSA:3.40.1190.20 6 270 5.8E-69 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 427 1.3E-141 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 Gene3D G3DSA:3.20.20.120 129 428 7.9E-142 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 SUPERFAMILY SSF54826 3 139 5.89E-57 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 Hamap MF_00318 Enolase [eno]. 2 414 45.953 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 Gene3D G3DSA:3.30.390.10 4 127 1.5E-56 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PANTHER PTHR11902 1 428 3.6E-281 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 SMART SM01193 4 135 1.4E-96 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PRINTS PR00148 Enolase signature 337 351 1.6E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PRINTS PR00148 Enolase signature 314 325 1.6E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PRINTS PR00148 Enolase signature 366 383 1.6E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PRINTS PR00148 Enolase signature 162 175 1.6E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PRINTS PR00148 Enolase signature 37 51 1.6E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PRINTS PR00148 Enolase signature 108 124 1.6E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 PIRSF PIRSF001400 1 428 1.1E-196 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 20-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 2.0E-214 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 SUPERFAMILY SSF51604 140 428 9.05E-132 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 Pfam PF03952 Enolase, N-terminal domain 4 135 2.4E-60 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APRE_RS03970 f9b9f721664b72e208aea9294797a80f 431 SMART SM01192 140 428 2.7E-228 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 PANTHER PTHR21148 1 370 1.5E-170 T 20-04-2016 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 364 55.991 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 SUPERFAMILY SSF51713 1 370 2.22E-158 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 366 1.9E-89 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 PANTHER PTHR21148:SF26 1 370 1.5E-170 T 20-04-2016 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 1.8E-160 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 371 2.1E-169 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS04640 b5a0f3aa79c3c1e50aa2de3a50ed24d8 372 Gene3D G3DSA:3.20.20.105 1 370 1.6E-168 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APRE_RS09090 21382faa2b7f7fe37cb82a1f335a202a 57 PANTHER PTHR32196:SF27 1 56 2.9E-15 T 20-04-2016 APRE_RS09090 21382faa2b7f7fe37cb82a1f335a202a 57 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 57 3.2E-6 T 20-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APRE_RS09090 21382faa2b7f7fe37cb82a1f335a202a 57 PANTHER PTHR32196 1 56 2.9E-15 T 20-04-2016 APRE_RS01640 b51a1c2693ce6d4b37c3e2a1e94377f6 337 SUPERFAMILY SSF53383 1 337 1.93E-60 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS01640 b51a1c2693ce6d4b37c3e2a1e94377f6 337 PANTHER PTHR10289:SF8 1 337 1.0E-96 T 20-04-2016 APRE_RS01640 b51a1c2693ce6d4b37c3e2a1e94377f6 337 Gene3D G3DSA:3.40.640.10 3 242 5.3E-49 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS01640 b51a1c2693ce6d4b37c3e2a1e94377f6 337 Gene3D G3DSA:3.90.1150.10 253 337 5.5E-24 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS01640 b51a1c2693ce6d4b37c3e2a1e94377f6 337 Pfam PF01212 Beta-eliminating lyase 31 292 2.7E-29 T 20-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 APRE_RS01640 b51a1c2693ce6d4b37c3e2a1e94377f6 337 PANTHER PTHR10289 1 337 1.0E-96 T 20-04-2016 APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 PANTHER PTHR15184:SF11 4 453 1.9E-262 T 20-04-2016 APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 8.7E-9 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 349 7.7E-65 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 455 58.617 T 20-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 Gene3D G3DSA:3.40.50.300 77 354 4.8E-96 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 SUPERFAMILY SSF52540 78 354 6.45E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 PANTHER PTHR15184 4 453 1.9E-262 T 20-04-2016 APRE_RS08625 ffddbea61582e99d1dab9b6ecace2e45 455 PIRSF PIRSF039114 1 455 1.4E-237 T 20-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 SUPERFAMILY SSF55979 1 110 1.39E-18 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 SMART SM00480 17 364 4.8E-73 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 250 367 2.3E-24 T 20-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 Gene3D G3DSA:3.10.150.10 251 368 8.0E-30 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 368 1.8E-78 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 SUPERFAMILY SSF55979 248 368 4.94E-27 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 Gene3D G3DSA:3.10.150.10 1 107 6.0E-22 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 Gene3D G3DSA:3.10.150.10 124 246 3.1E-25 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 Pfam PF02767 DNA polymerase III beta subunit, central domain 127 239 4.1E-21 T 20-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 113 5.7E-20 T 20-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 PANTHER PTHR30478 2 370 1.2E-89 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 SUPERFAMILY SSF55979 125 242 2.22E-19 T 20-04-2016 APRE_RS00010 d5aa0db895b5d5948b4d0480d6ab9996 370 PIRSF PIRSF000804 1 369 1.5E-85 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 Pfam PF00455 DeoR C terminal sensor domain 84 242 1.4E-38 T 20-04-2016 IPR014036 DeoR C-terminal sensor domain APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 SUPERFAMILY SSF100950 84 243 2.86E-25 T 20-04-2016 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 Gene3D G3DSA:1.10.10.10 1 55 1.5E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 3.0E-6 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 3.0E-6 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 SMART SM00420 7 59 2.5E-9 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 Pfam PF08220 DeoR-like helix-turn-helix domain 7 60 2.4E-12 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 SMART SM01134 82 243 7.9E-46 T 20-04-2016 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 Gene3D G3DSA:3.40.50.1360 85 222 1.0E-10 T 20-04-2016 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 20-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 PANTHER PTHR30363 1 263 9.9E-56 T 20-04-2016 APRE_RS00175 2233ea2ec22ea24e9088053d7046d976 264 SUPERFAMILY SSF46785 4 67 8.78E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 Gene3D G3DSA:3.30.420.40 6 162 6.6E-44 T 20-04-2016 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PANTHER PTHR11735:SF6 1 332 3.6E-156 T 20-04-2016 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 336 63.944 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 311 2.3E-116 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 SUPERFAMILY SSF53067 6 125 4.6E-30 T 20-04-2016 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 SUPERFAMILY SSF53067 105 315 1.3E-47 T 20-04-2016 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 Pfam PF00814 Glycoprotease family 26 311 1.5E-101 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 2.4E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 2.4E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 2.4E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 2.4E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 2.4E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 2.4E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 PANTHER PTHR11735 1 332 3.6E-156 T 20-04-2016 APRE_RS00945 20b3861c16ce37e14ea9e4798c2b8eeb 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 318 6.8E-136 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APRE_RS02775 2bb33664ee24da27f6905230ee00b4ca 357 Gene3D G3DSA:3.40.190.10 141 260 1.3E-11 T 20-04-2016 APRE_RS02775 2bb33664ee24da27f6905230ee00b4ca 357 SUPERFAMILY SSF53850 61 282 8.69E-30 T 20-04-2016 APRE_RS02775 2bb33664ee24da27f6905230ee00b4ca 357 PANTHER PTHR30024 61 346 1.9E-14 T 20-04-2016 APRE_RS02775 2bb33664ee24da27f6905230ee00b4ca 357 Pfam PF09084 NMT1/THI5 like 77 281 5.4E-15 T 20-04-2016 IPR015168 SsuA/THI5-like APRE_RS04945 528311e02655c2843152d9d5c614d988 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 186 1.5E-61 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 SUPERFAMILY SSF53178 1 186 6.67E-64 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 Pfam PF01195 Peptidyl-tRNA hydrolase 4 182 3.1E-56 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 PANTHER PTHR17224 1 195 4.1E-72 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 Gene3D G3DSA:3.40.50.1470 1 186 8.3E-71 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APRE_RS04945 528311e02655c2843152d9d5c614d988 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 34.366 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APRE_RS04065 36d726e8e9e58a6411f683418363c718 234 Gene3D G3DSA:1.10.530.10 112 183 1.7E-4 T 20-04-2016 APRE_RS04065 36d726e8e9e58a6411f683418363c718 234 SMART SM00047 99 231 1.4E-4 T 20-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APRE_RS04065 36d726e8e9e58a6411f683418363c718 234 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 112 222 1.0E-18 T 20-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 Pfam PF00551 Formyl transferase 2 174 2.3E-38 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 PANTHER PTHR10520 2 179 1.4E-61 T 20-04-2016 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 SUPERFAMILY SSF53328 2 179 8.24E-46 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 178 7.5E-45 T 20-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 Gene3D G3DSA:3.40.50.170 2 179 2.8E-50 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 180 25.798 T 20-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 PANTHER PTHR10520:SF9 2 179 1.4E-61 T 20-04-2016 APRE_RS05655 f3887028e6ae27773853c792a449ef99 181 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 126 149 - T 20-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS08195 b258178bfb9349532adc480af3a91688 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 13 202 1.9E-59 T 20-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APRE_RS08195 b258178bfb9349532adc480af3a91688 208 PANTHER PTHR30246:SF4 1 208 1.4E-83 T 20-04-2016 APRE_RS08195 b258178bfb9349532adc480af3a91688 208 Gene3D G3DSA:3.20.20.70 2 207 5.9E-75 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS08195 b258178bfb9349532adc480af3a91688 208 Pfam PF01081 KDPG and KHG aldolase 12 188 3.4E-47 T 20-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APRE_RS08195 b258178bfb9349532adc480af3a91688 208 SUPERFAMILY SSF51569 3 202 1.76E-64 T 20-04-2016 APRE_RS08195 b258178bfb9349532adc480af3a91688 208 PANTHER PTHR30246 1 208 1.4E-83 T 20-04-2016 APRE_RS06680 6772ef9244536615031b354448e22d0d 297 Pfam PF04085 rod shape-determining protein MreC 122 274 5.5E-32 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APRE_RS06680 6772ef9244536615031b354448e22d0d 297 PANTHER PTHR34138 1 297 1.6E-31 T 20-04-2016 APRE_RS06680 6772ef9244536615031b354448e22d0d 297 PANTHER PTHR34138:SF1 1 297 1.6E-31 T 20-04-2016 APRE_RS06680 6772ef9244536615031b354448e22d0d 297 PIRSF PIRSF038471 1 287 9.5E-46 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APRE_RS06680 6772ef9244536615031b354448e22d0d 297 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 15 278 3.9E-27 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APRE_RS06005 a860a10f4ae69f9ffcc4a584e490e044 245 SUPERFAMILY SSF63380 6 104 4.25E-5 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APRE_RS06005 a860a10f4ae69f9ffcc4a584e490e044 245 Gene3D G3DSA:3.40.50.80 109 226 4.3E-7 T 20-04-2016 APRE_RS06005 a860a10f4ae69f9ffcc4a584e490e044 245 SUPERFAMILY SSF52343 111 227 2.36E-8 T 20-04-2016 APRE_RS00965 3b7f063e25fa01003866491a4dde8a8e 403 PANTHER PTHR33392:SF6 6 296 3.3E-59 T 20-04-2016 APRE_RS00965 3b7f063e25fa01003866491a4dde8a8e 403 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 75 218 2.0E-40 T 20-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APRE_RS00965 3b7f063e25fa01003866491a4dde8a8e 403 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 75 217 1.3E-43 T 20-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APRE_RS00965 3b7f063e25fa01003866491a4dde8a8e 403 PANTHER PTHR33392 6 296 3.3E-59 T 20-04-2016 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 SUPERFAMILY SSF53244 299 436 8.24E-37 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 300 367 1.0E-6 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 3 435 1.7E-122 T 20-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 PANTHER PTHR23135 1 439 1.7E-132 T 20-04-2016 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 2 437 31.933 T 20-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 PANTHER PTHR23135:SF2 1 439 1.7E-132 T 20-04-2016 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 Gene3D G3DSA:3.90.190.20 300 433 1.4E-43 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 SUPERFAMILY SSF53623 92 296 7.2E-49 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 Gene3D G3DSA:3.40.1190.10 86 297 3.8E-56 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 Gene3D G3DSA:3.40.50.720 2 80 1.9E-11 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 Pfam PF08245 Mur ligase middle domain 103 279 1.5E-36 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS06125 ea9d95b01961e0a4dd9fefa035b8ed4e 439 SUPERFAMILY SSF51984 1 79 3.92E-10 T 20-04-2016 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 SUPERFAMILY SSF46589 812 876 6.8E-16 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Gene3D G3DSA:1.10.730.10 560 739 3.0E-58 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 859 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PANTHER PTHR11946 1 784 0.0 T 20-04-2016 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PANTHER PTHR11946 808 871 0.0 T 20-04-2016 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 559 9.5E-196 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Pfam PF08264 Anticodon-binding domain of tRNA 602 745 1.1E-39 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 2.0E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PRINTS PR00986 Valyl-tRNA synthetase signature 344 357 2.0E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PRINTS PR00986 Valyl-tRNA synthetase signature 229 246 2.0E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 2.0E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PRINTS PR00986 Valyl-tRNA synthetase signature 441 462 2.0E-34 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Gene3D G3DSA:3.90.740.10 193 335 4.5E-47 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PANTHER PTHR11946:SF5 1 784 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 PANTHER PTHR11946:SF5 808 871 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 877 15.364 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Gene3D G3DSA:3.40.50.620 4 192 6.5E-140 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Gene3D G3DSA:3.40.50.620 339 558 6.5E-140 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 SUPERFAMILY SSF47323 572 827 1.85E-62 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 812 877 2.5E-19 T 20-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 SUPERFAMILY SSF52374 339 570 1.2E-137 T 20-04-2016 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 SUPERFAMILY SSF52374 3 189 1.2E-137 T 20-04-2016 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 SUPERFAMILY SSF50677 190 340 4.32E-58 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APRE_RS06305 5246cd676be08b434d0c4a534a3e8c21 879 Gene3D G3DSA:1.10.287.380 805 875 5.1E-9 T 20-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 Gene3D G3DSA:3.40.50.150 1 159 1.2E-33 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 Gene3D G3DSA:3.40.50.150 194 220 1.2E-33 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 Pfam PF13649 Methyltransferase domain 40 132 4.4E-12 T 20-04-2016 APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 SUPERFAMILY SSF53335 1 241 1.32E-41 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 PANTHER PTHR10108:SF872 1 166 1.3E-15 T 20-04-2016 APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 PANTHER PTHR10108:SF872 188 236 1.3E-15 T 20-04-2016 APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 PANTHER PTHR10108 1 166 1.3E-15 T 20-04-2016 APRE_RS06300 e1614c4b6873f52aaa6e7814f6080cb5 242 PANTHER PTHR10108 188 236 1.3E-15 T 20-04-2016 APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 PANTHER PTHR30446:SF0 2 201 7.6E-95 T 20-04-2016 APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 89.418 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 TIGRFAM TIGR00615 recR: recombination protein RecR 4 197 7.0E-74 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 PANTHER PTHR30446 2 201 7.6E-95 T 20-04-2016 APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 20-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 SUPERFAMILY SSF111304 4 199 7.06E-72 T 20-04-2016 IPR023627 Recombination protein RecR APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 Pfam PF13662 Toprim domain 83 172 1.7E-21 T 20-04-2016 IPR006171 Toprim domain APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 Pfam PF02132 RecR protein 41 79 3.4E-14 T 20-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APRE_RS04095 3141b9dfbd15a11a666941858c08ce87 201 SMART SM00493 81 166 5.8E-4 T 20-04-2016 IPR006171 Toprim domain APRE_RS04560 bf3fd80c2756394d43d8169d153a2bcf 142 Gene3D G3DSA:3.40.50.300 1 40 4.0E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06080 05c210dbe2fba8a8486d835c08ce75f6 112 Pfam PF13630 SdpI/YhfL protein family 29 94 8.6E-13 T 20-04-2016 IPR025962 SdpI/YhfL protein family APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 Pfam PF01245 Ribosomal protein L19 3 112 2.8E-45 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.125 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 PRINTS PR00061 Ribosomal protein L19 signature 33 62 4.1E-37 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 PRINTS PR00061 Ribosomal protein L19 signature 3 32 4.1E-37 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 PRINTS PR00061 Ribosomal protein L19 signature 87 112 4.1E-37 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 3.3E-47 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 PANTHER PTHR15680 2 112 1.4E-42 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 SUPERFAMILY SSF50104 1 114 3.21E-42 T 20-04-2016 IPR008991 Translation protein SH3-like domain APRE_RS06585 2042d5c553fe9e4fbfc13b4990bce23c 115 PIRSF PIRSF002191 1 115 4.2E-46 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS01840 41c62df9361e2cf74e0a6ee1ecb69767 176 Pfam PF00872 Transposase, Mutator family 2 118 4.1E-33 T 20-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APRE_RS01840 41c62df9361e2cf74e0a6ee1ecb69767 176 PANTHER PTHR33217 1 175 4.4E-45 T 20-04-2016 APRE_RS06370 b1a0928dde00a4449dfbdd9eebd1f223 385 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 170 356 1.1E-4 T 20-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APRE_RS06370 b1a0928dde00a4449dfbdd9eebd1f223 385 Gene3D G3DSA:3.20.20.210 7 385 6.1E-81 T 20-04-2016 APRE_RS06370 b1a0928dde00a4449dfbdd9eebd1f223 385 PANTHER PTHR30519:SF3 8 385 1.4E-73 T 20-04-2016 APRE_RS06370 b1a0928dde00a4449dfbdd9eebd1f223 385 PANTHER PTHR30519 8 385 1.4E-73 T 20-04-2016 APRE_RS06370 b1a0928dde00a4449dfbdd9eebd1f223 385 SUPERFAMILY SSF51726 7 384 1.7E-53 T 20-04-2016 APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 PANTHER PTHR11088:SF25 2 283 2.5E-89 T 20-04-2016 APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 284 1.4E-84 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 Gene3D G3DSA:3.40.50.300 2 171 1.9E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 Gene3D G3DSA:1.10.287.890 200 281 2.6E-31 T 20-04-2016 APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 SUPERFAMILY SSF52540 5 160 6.52E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 Pfam PF01715 IPP transferase 38 282 4.1E-71 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 SUPERFAMILY SSF52540 150 210 7.1E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 SUPERFAMILY SSF52540 248 311 7.1E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 SUPERFAMILY SSF52540 3 46 7.1E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 314 26.861 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APRE_RS04855 9122a6e0982ddcd39fe0389117065b19 315 PANTHER PTHR11088 2 283 2.5E-89 T 20-04-2016 APRE_RS08655 61630ae16bb6945828eb5acdaa853c13 646 Pfam PF01496 V-type ATPase 116kDa subunit family 27 401 5.3E-16 T 20-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 APRE_RS08655 61630ae16bb6945828eb5acdaa853c13 646 Pfam PF01496 V-type ATPase 116kDa subunit family 544 629 2.1E-9 T 20-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 APRE_RS06725 bd41b67ffadfc31ca2906852d2ca19a5 325 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 12 315 4.6E-99 T 20-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APRE_RS06725 bd41b67ffadfc31ca2906852d2ca19a5 325 PANTHER PTHR30578 6 322 3.8E-105 T 20-04-2016 APRE_RS06725 bd41b67ffadfc31ca2906852d2ca19a5 325 Pfam PF03116 NQR2, RnfD, RnfE family 9 314 1.3E-113 T 20-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APRE_RS06725 bd41b67ffadfc31ca2906852d2ca19a5 325 PANTHER PTHR30578:SF0 6 322 3.8E-105 T 20-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APRE_RS06725 bd41b67ffadfc31ca2906852d2ca19a5 325 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 7 316 24.178 T 20-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APRE_RS08870 57e65438cd2135a93fb06f56035d1bbc 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.9E-18 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08870 57e65438cd2135a93fb06f56035d1bbc 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 20-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08870 57e65438cd2135a93fb06f56035d1bbc 44 PANTHER PTHR14503 1 44 3.3E-17 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08870 57e65438cd2135a93fb06f56035d1bbc 44 Pfam PF00468 Ribosomal protein L34 1 44 7.6E-21 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08870 57e65438cd2135a93fb06f56035d1bbc 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 27 6.0E-6 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08870 57e65438cd2135a93fb06f56035d1bbc 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.687 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS04480 655e94f511919526970d63ed0abe15d1 424 PANTHER PTHR30474:SF3 52 407 5.3E-91 T 20-04-2016 APRE_RS04480 655e94f511919526970d63ed0abe15d1 424 PANTHER PTHR30474 52 407 5.3E-91 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APRE_RS04480 655e94f511919526970d63ed0abe15d1 424 Pfam PF01098 Cell cycle protein 75 406 6.3E-73 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APRE_RS05495 009b84ead9a1e9323bfff5a75d2e9108 444 SUPERFAMILY SSF52540 47 243 1.37E-21 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05495 009b84ead9a1e9323bfff5a75d2e9108 444 Pfam PF05128 Domain of unknown function (DUF697) 309 439 9.6E-8 T 20-04-2016 IPR021147 Protein of unknown function DUF697 APRE_RS05495 009b84ead9a1e9323bfff5a75d2e9108 444 Gene3D G3DSA:3.40.50.300 72 224 3.7E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05495 009b84ead9a1e9323bfff5a75d2e9108 444 Pfam PF01926 50S ribosome-binding GTPase 59 186 3.4E-10 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS05495 009b84ead9a1e9323bfff5a75d2e9108 444 Gene3D G3DSA:3.40.50.300 33 71 2.2E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08315 798354b89b2e6138b336abc086f86136 402 PANTHER PTHR11751 4 398 1.0E-92 T 20-04-2016 APRE_RS08315 798354b89b2e6138b336abc086f86136 402 Gene3D G3DSA:3.40.640.10 53 266 1.3E-44 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS08315 798354b89b2e6138b336abc086f86136 402 PANTHER PTHR11751:SF21 4 398 1.0E-92 T 20-04-2016 APRE_RS08315 798354b89b2e6138b336abc086f86136 402 SUPERFAMILY SSF53383 33 399 1.73E-82 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS08315 798354b89b2e6138b336abc086f86136 402 Pfam PF00155 Aminotransferase class I and II 47 395 2.3E-27 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APRE_RS08315 798354b89b2e6138b336abc086f86136 402 Gene3D G3DSA:3.90.1150.10 267 400 6.8E-25 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 Gene3D G3DSA:3.90.1150.10 242 363 4.1E-27 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 PIRSF PIRSF005572 1 371 2.0E-99 T 20-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 Gene3D G3DSA:3.40.640.10 14 241 4.5E-66 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 SUPERFAMILY SSF53383 1 364 9.55E-86 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 PANTHER PTHR11601 1 370 2.0E-103 T 20-04-2016 APRE_RS04725 d0de6f6e637f886d41769307cb5f7687 372 Pfam PF00266 Aminotransferase class-V 2 355 2.5E-74 T 20-04-2016 IPR000192 Aminotransferase class V domain APRE_RS02205 63de326270319bf67d0b566abaeab4aa 402 PANTHER PTHR21716:SF14 34 398 4.2E-46 T 20-04-2016 APRE_RS02205 63de326270319bf67d0b566abaeab4aa 402 Pfam PF01594 Domain of unknown function DUF20 30 367 1.3E-40 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APRE_RS02205 63de326270319bf67d0b566abaeab4aa 402 PANTHER PTHR21716 34 398 4.2E-46 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APRE_RS05595 591eecceb332b45a44a0471f83b2eb66 159 Pfam PF03061 Thioesterase superfamily 60 144 5.1E-5 T 20-04-2016 IPR006683 Thioesterase domain APRE_RS05595 591eecceb332b45a44a0471f83b2eb66 159 SUPERFAMILY SSF54637 7 152 5.19E-24 T 20-04-2016 IPR029069 HotDog domain APRE_RS05595 591eecceb332b45a44a0471f83b2eb66 159 Gene3D G3DSA:3.10.129.10 4 158 8.1E-46 T 20-04-2016 IPR029069 HotDog domain APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 PANTHER PTHR21090:SF19 4 421 2.7E-202 T 20-04-2016 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 411 3.4E-103 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 SUPERFAMILY SSF55205 5 421 1.34E-137 T 20-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 PANTHER PTHR21090 4 421 2.7E-202 T 20-04-2016 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 3 421 45.266 T 20-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 Gene3D G3DSA:3.65.10.10 224 421 2.9E-64 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 Gene3D G3DSA:3.65.10.10 23 223 3.2E-64 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APRE_RS03915 55fbfaaa7f388cb4c9c594cd9653258c 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 420 4.9E-174 T 20-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02355 c36ae0c603a4bce2782de8fce1b4eec1 634 SUPERFAMILY SSF56300 178 239 5.94E-8 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02355 c36ae0c603a4bce2782de8fce1b4eec1 634 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 3 633 31.766 T 20-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APRE_RS02355 c36ae0c603a4bce2782de8fce1b4eec1 634 Gene3D G3DSA:3.60.21.10 382 421 6.6E-6 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02355 c36ae0c603a4bce2782de8fce1b4eec1 634 Gene3D G3DSA:3.60.21.10 484 553 6.6E-6 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02355 c36ae0c603a4bce2782de8fce1b4eec1 634 Gene3D G3DSA:3.60.21.10 178 250 6.6E-6 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02355 c36ae0c603a4bce2782de8fce1b4eec1 634 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 5 631 8.5E-252 T 20-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:3.30.1490.20 200 247 8.0E-29 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:3.30.1490.20 130 153 8.0E-29 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:3.40.50.300 598 669 1.3E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:3.40.50.300 816 933 1.3E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:3.40.50.300 476 595 6.2E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:3.40.50.300 4 89 6.2E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Pfam PF00005 ABC transporter 619 855 2.6E-9 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 935 22.348 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 SUPERFAMILY SSF52540 611 908 7.93E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:1.20.1580.10 689 815 9.2E-55 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 SUPERFAMILY SSF52540 5 204 1.92E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 SUPERFAMILY SSF52540 428 567 1.92E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 ProSitePatterns PS00211 ABC transporters family signature. 825 839 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:1.10.8.280 284 404 2.5E-32 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 PANTHER PTHR32282 2 935 0.0 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 PANTHER PTHR32282:SF2 2 935 0.0 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:1.20.1580.10 248 281 8.3E-54 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:1.20.1580.10 405 475 8.3E-54 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 Gene3D G3DSA:1.20.1580.10 91 129 8.3E-54 T 20-04-2016 APRE_RS07225 3973529e831f368764a7c635600dd5b4 935 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 920 0.0 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APRE_RS09420 3c74c120e4524cc693947e65d3abdd1d 651 PANTHER PTHR22935:SF10 118 511 4.8E-78 T 20-04-2016 APRE_RS09420 3c74c120e4524cc693947e65d3abdd1d 651 SUPERFAMILY SSF56601 135 508 6.72E-72 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS09420 3c74c120e4524cc693947e65d3abdd1d 651 Pfam PF00144 Beta-lactamase 139 515 2.9E-59 T 20-04-2016 IPR001466 Beta-lactamase-related APRE_RS09420 3c74c120e4524cc693947e65d3abdd1d 651 Gene3D G3DSA:3.40.710.10 130 508 2.7E-82 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS09420 3c74c120e4524cc693947e65d3abdd1d 651 PANTHER PTHR22935 118 511 4.8E-78 T 20-04-2016 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 861 5.7E-276 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Gene3D G3DSA:3.30.420.110 129 264 7.2E-18 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 700 716 - T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Gene3D G3DSA:3.40.50.300 577 809 1.2E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 PANTHER PTHR11361:SF86 1 868 0.0 T 20-04-2016 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 SUPERFAMILY SSF53150 121 288 5.62E-24 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Pfam PF00488 MutS domain V 622 808 5.5E-82 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 SUPERFAMILY SSF52540 577 808 8.22E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 SMART SM00534 619 806 4.7E-107 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Pfam PF05192 MutS domain III 278 569 2.0E-36 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 SMART SM00533 293 601 1.8E-85 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 SUPERFAMILY SSF55271 4 118 6.02E-39 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Pfam PF05188 MutS domain II 131 261 9.1E-8 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 857 23.377 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Gene3D G3DSA:1.10.1420.10 272 478 6.7E-51 T 20-04-2016 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 PIRSF PIRSF037677 4 862 1.1E-165 T 20-04-2016 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 PANTHER PTHR11361 1 868 0.0 T 20-04-2016 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Gene3D G3DSA:3.40.1170.10 6 122 1.6E-46 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Pfam PF01624 MutS domain I 11 122 1.1E-41 T 20-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 SUPERFAMILY SSF48334 277 575 1.57E-78 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APRE_RS04845 dad2e876f86788ffdc432cc3aa18e700 868 Pfam PF05190 MutS family domain IV 439 524 1.0E-23 T 20-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF07501 G5 domain 2985 3060 8.8E-11 T 20-04-2016 IPR011098 G5 domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SUPERFAMILY SSF49478 1188 1253 3.65E-9 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 PANTHER PTHR36108:SF2 1992 2077 3.4E-16 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 PANTHER PTHR36108:SF2 2095 2185 3.4E-16 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SUPERFAMILY SSF49478 2006 2068 9.42E-7 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 4220 4373 4.0E-16 T 20-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 3818 3878 8.2E-7 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 2118 2182 1.5E-11 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 3387 3464 1.2E-5 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 3968 4037 3.0E-10 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 1197 1258 8.8E-14 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 1491 1561 1.5E-6 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 2446 2514 2.5E-9 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Pfam PF05738 Cna protein B-type domain 2010 2075 1.7E-13 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Gene3D G3DSA:2.60.40.1280 633 758 1.9E-11 T 20-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Gene3D G3DSA:2.60.40.1280 1591 1777 7.7E-17 T 20-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Gene3D G3DSA:2.60.40.1280 4078 4232 5.4E-31 T 20-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 PANTHER PTHR36108 1992 2077 3.4E-16 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 PANTHER PTHR36108 2095 2185 3.4E-16 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Gene3D G3DSA:2.60.40.1290 4233 4427 1.1E-25 T 20-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SUPERFAMILY SSF49478 1482 1559 6.67E-5 T 20-04-2016 APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SMART SM01208 2982 3061 4.5E-16 T 20-04-2016 IPR011098 G5 domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SMART SM01208 3234 3322 0.015 T 20-04-2016 IPR011098 G5 domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SUPERFAMILY SSF49401 4061 4206 3.48E-21 T 20-04-2016 IPR008966 Adhesion domain APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 Gene3D G3DSA:2.60.40.10 1191 1242 4.2E-4 T 20-04-2016 IPR013783 Immunoglobulin-like fold APRE_RS08095 21173ee14ac33102bf3ba3b378dbd65f 4909 SUPERFAMILY SSF49478 2112 2179 4.32E-5 T 20-04-2016 APRE_RS05380 d41e721b2d5c52e22741fd58ab59e97c 201 Pfam PF14014 Protein of unknown function (DUF4230) 46 186 9.8E-30 T 20-04-2016 IPR025324 Protein of unknown function DUF4230 APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 PIRSF PIRSF029256 1 152 8.1E-57 T 20-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 SUPERFAMILY SSF75217 2 150 1.05E-39 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 Pfam PF00588 SpoU rRNA Methylase family 3 142 5.6E-34 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 Gene3D G3DSA:3.40.1280.10 2 151 5.5E-56 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 PANTHER PTHR12029 1 151 3.5E-63 T 20-04-2016 APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 31.788 T 20-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APRE_RS03945 823a3ea55caf491015d661f5ded945c0 152 PANTHER PTHR12029:SF31 1 151 3.5E-63 T 20-04-2016 APRE_RS03740 b4a865f8799c3b92c0a6d0521d4323f0 234 PIRSF PIRSF009467 5 234 1.2E-56 T 20-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APRE_RS03740 b4a865f8799c3b92c0a6d0521d4323f0 234 Hamap MF_01385 Urease accessory protein UreF [ureF]. 8 234 24.213 T 20-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APRE_RS03740 b4a865f8799c3b92c0a6d0521d4323f0 234 PANTHER PTHR33620 10 234 4.6E-38 T 20-04-2016 APRE_RS03740 b4a865f8799c3b92c0a6d0521d4323f0 234 Pfam PF01730 UreF 40 190 5.6E-31 T 20-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APRE_RS07255 0055643faabffcb8c4f4f7de0d1fd282 441 PANTHER PTHR30588 2 438 5.6E-139 T 20-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APRE_RS07255 0055643faabffcb8c4f4f7de0d1fd282 441 PANTHER PTHR30588:SF0 2 438 5.6E-139 T 20-04-2016 APRE_RS07255 0055643faabffcb8c4f4f7de0d1fd282 441 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 412 1.6E-89 T 20-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APRE_RS07255 0055643faabffcb8c4f4f7de0d1fd282 441 Pfam PF05525 Branched-chain amino acid transport protein 5 423 9.1E-107 T 20-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APRE_RS01305 9560b123912b637c95fc9bce943077ac 293 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 3 290 17.893 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APRE_RS01305 9560b123912b637c95fc9bce943077ac 293 PANTHER PTHR30622 1 289 2.8E-103 T 20-04-2016 APRE_RS01305 9560b123912b637c95fc9bce943077ac 293 Pfam PF02673 Bacitracin resistance protein BacA 9 285 9.2E-80 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APRE_RS01305 9560b123912b637c95fc9bce943077ac 293 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 283 4.9E-69 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APRE_RS01305 9560b123912b637c95fc9bce943077ac 293 PANTHER PTHR30622:SF5 1 289 2.8E-103 T 20-04-2016 APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 SUPERFAMILY SSF51161 289 356 1.16E-10 T 20-04-2016 IPR011004 Trimeric LpxA-like APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 PANTHER PTHR22572:SF9 5 366 1.9E-57 T 20-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 PANTHER PTHR22572 5 366 1.9E-57 T 20-04-2016 APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 SUPERFAMILY SSF53448 23 258 1.77E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 SUPERFAMILY SSF53448 319 332 1.77E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 Gene3D G3DSA:3.90.550.10 21 328 4.0E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS04450 cfd01c540c8c9e092974961cbfd484a7 374 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 5 369 9.7E-85 T 20-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 Gene3D G3DSA:3.40.50.1980 36 191 1.9E-46 T 20-04-2016 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 Gene3D G3DSA:3.40.50.1980 192 312 1.2E-37 T 20-04-2016 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PANTHER PTHR30477:SF1 6 295 7.8E-71 T 20-04-2016 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PANTHER PTHR30477 6 295 7.8E-71 T 20-04-2016 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00691 Adhesin B signature 67 85 3.6E-10 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00691 Adhesin B signature 248 265 3.6E-10 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00691 Adhesin B signature 42 63 3.6E-10 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00691 Adhesin B signature 141 160 3.6E-10 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00691 Adhesin B signature 199 216 3.6E-10 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00690 Adhesin family signature 199 220 5.6E-13 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00690 Adhesin family signature 252 270 5.6E-13 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00690 Adhesin family signature 73 86 5.6E-13 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00690 Adhesin family signature 86 103 5.6E-13 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 PRINTS PR00690 Adhesin family signature 42 60 5.6E-13 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 Pfam PF01297 Zinc-uptake complex component A periplasmic 45 309 1.4E-75 T 20-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APRE_RS02445 0d53424d790975b83f84a15ca3734a0a 313 SUPERFAMILY SSF53807 40 312 8.34E-79 T 20-04-2016 APRE_RS06360 b8af23fb06386a7a5396d8ec07436a5f 324 Pfam PF03631 Virulence factor BrkB 21 289 5.4E-47 T 20-04-2016 IPR017039 Virulence factor BrkB APRE_RS06360 b8af23fb06386a7a5396d8ec07436a5f 324 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 10 286 4.9E-25 T 20-04-2016 IPR017039 Virulence factor BrkB APRE_RS06360 b8af23fb06386a7a5396d8ec07436a5f 324 PANTHER PTHR30213 10 300 5.6E-40 T 20-04-2016 APRE_RS06360 b8af23fb06386a7a5396d8ec07436a5f 324 PANTHER PTHR30213:SF1 10 300 5.6E-40 T 20-04-2016 APRE_RS06360 b8af23fb06386a7a5396d8ec07436a5f 324 PIRSF PIRSF035875 1 308 5.1E-52 T 20-04-2016 IPR017039 Virulence factor BrkB APRE_RS06895 8480116d527fd0c142f02623774455b8 150 Pfam PF01047 MarR family 37 91 5.7E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS06895 8480116d527fd0c142f02623774455b8 150 Gene3D G3DSA:1.10.10.10 21 144 2.1E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06895 8480116d527fd0c142f02623774455b8 150 PANTHER PTHR33164 29 147 3.5E-13 T 20-04-2016 APRE_RS06895 8480116d527fd0c142f02623774455b8 150 SUPERFAMILY SSF46785 17 142 3.38E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06895 8480116d527fd0c142f02623774455b8 150 SMART SM00347 27 127 3.3E-4 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS09205 56cf655a1f9706c00ebebd43b9fd031d 136 PANTHER PTHR11804:SF8 6 136 2.2E-40 T 20-04-2016 APRE_RS09205 56cf655a1f9706c00ebebd43b9fd031d 136 Pfam PF01432 Peptidase family M3 29 136 6.3E-27 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APRE_RS09205 56cf655a1f9706c00ebebd43b9fd031d 136 Gene3D G3DSA:3.40.390.10 81 134 7.9E-6 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APRE_RS09205 56cf655a1f9706c00ebebd43b9fd031d 136 SUPERFAMILY SSF55486 2 136 3.15E-42 T 20-04-2016 APRE_RS09205 56cf655a1f9706c00ebebd43b9fd031d 136 PANTHER PTHR11804 6 136 2.2E-40 T 20-04-2016 APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 Pfam PF00326 Prolyl oligopeptidase family 427 637 1.7E-51 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 PANTHER PTHR11731 8 637 2.6E-107 T 20-04-2016 APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 Gene3D G3DSA:2.120.10.60 156 335 5.3E-8 T 20-04-2016 APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 Gene3D G3DSA:2.120.10.60 14 79 5.3E-8 T 20-04-2016 APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 PANTHER PTHR11731:SF90 8 637 2.6E-107 T 20-04-2016 APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 Gene3D G3DSA:3.40.50.1820 380 636 2.2E-66 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 SUPERFAMILY SSF53474 382 636 8.76E-66 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS06355 665b7d6ef91ae134ce00ec9fc4933734 638 SUPERFAMILY SSF82171 14 337 6.41E-10 T 20-04-2016 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 ProSitePatterns PS00113 Adenylate kinase signature. 85 96 - T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 PANTHER PTHR23359 1 216 2.9E-90 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 PRINTS PR00094 Adenylate kinase signature 181 195 8.8E-30 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 PRINTS PR00094 Adenylate kinase signature 85 101 8.8E-30 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 PRINTS PR00094 Adenylate kinase signature 164 179 8.8E-30 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 PRINTS PR00094 Adenylate kinase signature 4 17 8.8E-30 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 PRINTS PR00094 Adenylate kinase signature 32 46 8.8E-30 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 Pfam PF05191 Adenylate kinase, active site lid 131 166 1.7E-18 T 20-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 SUPERFAMILY SSF52540 1 215 5.22E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 Gene3D G3DSA:3.40.50.300 1 214 2.2E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 TIGRFAM TIGR01351 adk: adenylate kinase 2 215 7.1E-76 T 20-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 Pfam PF00406 Adenylate kinase 5 194 3.6E-50 T 20-04-2016 APRE_RS07965 322506601ff74c589f8772f54e9b87b9 218 Hamap MF_00235 Adenylate kinase [adk]. 1 217 49.569 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 PANTHER PTHR30006:SF2 67 378 3.0E-61 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 Gene3D G3DSA:3.40.190.10 166 303 1.7E-38 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 SUPERFAMILY SSF53850 73 368 1.09E-59 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 Pfam PF13343 Bacterial extracellular solute-binding protein 115 324 9.7E-34 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 PANTHER PTHR30006 67 378 3.0E-61 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 Gene3D G3DSA:3.40.190.10 304 356 3.1E-29 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 Gene3D G3DSA:3.40.190.10 1 23 3.1E-29 T 20-04-2016 APRE_RS00255 4b395176cc25b26e311226150321b4c8 378 Gene3D G3DSA:3.40.190.10 59 162 3.1E-29 T 20-04-2016 APRE_RS02650 11567ee862c9361e7d761758cb0c43fd 223 Pfam PF00005 ABC transporter 20 168 9.3E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02650 11567ee862c9361e7d761758cb0c43fd 223 Gene3D G3DSA:3.40.50.300 3 219 4.0E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02650 11567ee862c9361e7d761758cb0c43fd 223 SUPERFAMILY SSF52540 4 220 7.07E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02650 11567ee862c9361e7d761758cb0c43fd 223 SMART SM00382 28 221 3.0E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02650 11567ee862c9361e7d761758cb0c43fd 223 PANTHER PTHR24220 5 220 3.2E-61 T 20-04-2016 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 SUPERFAMILY SSF53720 3 435 4.06E-110 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 Gene3D G3DSA:3.40.605.10 3 224 2.1E-53 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 PANTHER PTHR11699:SF15 1 456 5.4E-185 T 20-04-2016 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 PIRSF PIRSF036492 1 456 3.0E-165 T 20-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 Pfam PF00171 Aldehyde dehydrogenase family 25 428 5.4E-77 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 PANTHER PTHR11699 1 456 5.4E-185 T 20-04-2016 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APRE_RS02660 5c5e504f6eb7a40bfb07d8d067d5f64e 456 Gene3D G3DSA:3.40.309.10 225 408 6.6E-56 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APRE_RS08360 ab7573014d77537cef52d77b723ab33f 203 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 3 196 4.5E-49 T 20-04-2016 IPR012729 Thiamine biosynthesis protein ThiF APRE_RS08360 ab7573014d77537cef52d77b723ab33f 203 Gene3D G3DSA:3.40.50.720 17 199 6.3E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08360 ab7573014d77537cef52d77b723ab33f 203 PANTHER PTHR10953 17 103 1.3E-23 T 20-04-2016 APRE_RS08360 ab7573014d77537cef52d77b723ab33f 203 SUPERFAMILY SSF69572 7 198 4.05E-40 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APRE_RS08360 ab7573014d77537cef52d77b723ab33f 203 Pfam PF00899 ThiF family 18 154 6.1E-30 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 Gene3D G3DSA:3.30.420.40 94 256 4.5E-38 T 20-04-2016 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 225 5.9E-48 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 Pfam PF03309 Type III pantothenate kinase 2 204 3.7E-50 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 SUPERFAMILY SSF53067 123 255 9.93E-24 T 20-04-2016 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 256 25.321 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 SUPERFAMILY SSF53067 1 118 3.5E-23 T 20-04-2016 APRE_RS03040 ec1bb9ade53b1abd244c90bad34a58db 257 PANTHER PTHR34265 1 256 1.2E-42 T 20-04-2016 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 SMART SM01092 181 284 4.0E-14 T 20-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 Gene3D G3DSA:3.30.390.50 181 288 2.3E-22 T 20-04-2016 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 Gene3D G3DSA:3.30.465.10 57 171 5.5E-34 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 SUPERFAMILY SSF55447 182 286 6.02E-19 T 20-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 282 4.5E-20 T 20-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 PANTHER PTHR11908:SF68 12 286 2.9E-70 T 20-04-2016 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 SUPERFAMILY SSF56176 9 172 3.27E-46 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 PANTHER PTHR11908 12 286 2.9E-70 T 20-04-2016 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 Gene3D G3DSA:3.30.43.10 9 49 1.0E-6 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APRE_RS07310 eef26592c058f3d0ea611dcc0421e9c1 295 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 10 171 6.2E-47 T 20-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 Pfam PF01235 Sodium:alanine symporter family 47 450 9.4E-132 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 TIGRFAM TIGR00835 agcS: amino acid carrier protein 14 438 2.4E-128 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PANTHER PTHR30330 1 455 7.4E-154 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PRINTS PR00175 Sodium/alanine symporter signature 407 427 1.7E-43 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PRINTS PR00175 Sodium/alanine symporter signature 299 317 1.7E-43 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PRINTS PR00175 Sodium/alanine symporter signature 85 107 1.7E-43 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PRINTS PR00175 Sodium/alanine symporter signature 204 223 1.7E-43 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PRINTS PR00175 Sodium/alanine symporter signature 176 194 1.7E-43 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 PRINTS PR00175 Sodium/alanine symporter signature 345 367 1.7E-43 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS07765 dc489f3a2afe60ed4f6a0cc0619c7f92 459 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 85 100 - T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 Gene3D G3DSA:3.40.190.10 64 193 1.1E-20 T 20-04-2016 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 SUPERFAMILY SSF53850 19 25 8.89E-66 T 20-04-2016 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 SUPERFAMILY SSF53850 58 435 8.89E-66 T 20-04-2016 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 Pfam PF13416 Bacterial extracellular solute-binding protein 80 375 3.8E-42 T 20-04-2016 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 PANTHER PTHR30061 1 36 3.5E-55 T 20-04-2016 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 PANTHER PTHR30061 52 439 3.5E-55 T 20-04-2016 APRE_RS01410 1c962038b0b65df1933fff4b90ef3d0e 439 Gene3D G3DSA:3.40.190.10 194 370 2.4E-28 T 20-04-2016 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 PANTHER PTHR10357:SF170 450 549 1.1E-255 T 20-04-2016 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 PANTHER PTHR10357:SF170 5 418 1.1E-255 T 20-04-2016 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 SUPERFAMILY SSF51445 4 470 6.34E-140 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 4 549 8.6E-252 T 20-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 Pfam PF16657 Maltogenic Amylase, C-terminal domain 478 545 6.4E-7 T 20-04-2016 IPR032091 Maltogenic Amylase, C-terminal APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 SUPERFAMILY SSF51011 474 549 5.04E-13 T 20-04-2016 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 PANTHER PTHR10357 450 549 1.1E-255 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 PANTHER PTHR10357 5 418 1.1E-255 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 Gene3D G3DSA:3.90.400.10 101 167 7.2E-26 T 20-04-2016 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 SMART SM00642 10 413 2.4E-120 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 Gene3D G3DSA:2.60.40.1180 476 549 4.0E-18 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 Pfam PF00128 Alpha amylase, catalytic domain 25 370 7.5E-106 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 Gene3D G3DSA:3.20.20.80 5 100 2.2E-114 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS02510 bb4ed8b9f2266a57ad8f1a2658c88b30 553 Gene3D G3DSA:3.20.20.80 171 471 2.2E-114 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 PANTHER PTHR30632:SF0 44 282 5.5E-54 T 20-04-2016 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 Pfam PF13531 Bacterial extracellular solute-binding protein 50 279 8.6E-40 T 20-04-2016 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 SUPERFAMILY SSF53850 49 281 1.12E-51 T 20-04-2016 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 Gene3D G3DSA:3.40.190.10 243 280 8.8E-24 T 20-04-2016 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 Gene3D G3DSA:3.40.190.10 1 143 8.8E-24 T 20-04-2016 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 PANTHER PTHR30632 44 282 5.5E-54 T 20-04-2016 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 55 278 8.7E-44 T 20-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 PIRSF PIRSF004846 1 283 1.7E-63 T 20-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APRE_RS07410 b3957a7a0590477d082f249866710c4c 283 Gene3D G3DSA:3.40.190.10 144 237 3.9E-22 T 20-04-2016 APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 4 404 3.0E-172 T 20-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 SUPERFAMILY SSF53383 1 401 2.06E-123 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 PANTHER PTHR11601 4 400 7.1E-187 T 20-04-2016 APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 PANTHER PTHR11601:SF17 4 400 7.1E-187 T 20-04-2016 APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 Gene3D G3DSA:3.90.1150.10 283 399 5.1E-27 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 Pfam PF00266 Aminotransferase class-V 23 392 7.1E-142 T 20-04-2016 IPR000192 Aminotransferase class V domain APRE_RS08380 80cedf7353cf572a3457dcb05930d787 406 Gene3D G3DSA:3.40.640.10 36 282 1.2E-82 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 Pfam PF03602 Conserved hypothetical protein 95 1 179 2.6E-47 T 20-04-2016 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 179 1.7E-42 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 Gene3D G3DSA:3.40.50.150 1 181 2.5E-52 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 PANTHER PTHR18895 12 182 2.0E-32 T 20-04-2016 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 PIRSF PIRSF004553 1 182 6.5E-46 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 PANTHER PTHR18895:SF60 12 182 2.0E-32 T 20-04-2016 APRE_RS05300 dcb847ed961890726a14c9a607ad17a0 187 SUPERFAMILY SSF53335 1 178 7.81E-41 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 Pfam PF00437 Type II/IV secretion system protein 21 282 1.5E-74 T 20-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 SMART SM00382 143 266 7.9E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 PANTHER PTHR30258 13 386 3.0E-149 T 20-04-2016 APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 Gene3D G3DSA:3.40.50.300 126 389 3.0E-87 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 210 224 - T 20-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 SUPERFAMILY SSF52540 11 386 8.9E-77 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 Gene3D G3DSA:3.30.450.90 9 114 1.2E-37 T 20-04-2016 APRE_RS03075 ff002edd3df3a4ab6f19dcd9e7fbd72f 392 PANTHER PTHR30258:SF1 13 386 3.0E-149 T 20-04-2016 APRE_RS04860 38ae5bb02b650bcaa0538579d83a5ee7 425 PANTHER PTHR11808 1 413 5.7E-109 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APRE_RS04860 38ae5bb02b650bcaa0538579d83a5ee7 425 SUPERFAMILY SSF53383 60 373 9.33E-41 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS04860 38ae5bb02b650bcaa0538579d83a5ee7 425 Pfam PF06838 Methionine gamma-lyase 19 419 6.3E-167 T 20-04-2016 IPR009651 Putative methionine gamma-lyase APRE_RS04860 38ae5bb02b650bcaa0538579d83a5ee7 425 Gene3D G3DSA:3.40.640.10 45 271 2.8E-36 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS04860 38ae5bb02b650bcaa0538579d83a5ee7 425 PANTHER PTHR11808:SF53 1 413 5.7E-109 T 20-04-2016 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 230 42.829 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 SUPERFAMILY SSF56808 6 226 1.83E-77 T 20-04-2016 IPR023674 Ribosomal protein L1-like APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 Gene3D G3DSA:3.30.190.20 18 68 8.9E-47 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 Gene3D G3DSA:3.30.190.20 162 226 8.9E-47 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 PANTHER PTHR23105:SF5 19 232 1.5E-80 T 20-04-2016 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 Pfam PF00687 Ribosomal protein L1p/L10e family 32 221 1.4E-54 T 20-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 9.4E-100 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 PIRSF PIRSF002155 1 227 2.5E-80 T 20-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 Gene3D G3DSA:3.40.50.790 69 160 1.6E-39 T 20-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APRE_RS05840 93e57499c5085bc7d2b940ce5e55b4e7 236 PANTHER PTHR23105 19 232 1.5E-80 T 20-04-2016 APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 PANTHER PTHR24220 15 258 1.4E-139 T 20-04-2016 APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 Gene3D G3DSA:3.40.50.300 7 252 1.2E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 Pfam PF00005 ABC transporter 29 185 2.3E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 14 260 7.5E-126 T 20-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 SUPERFAMILY SSF52540 9 247 1.29E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 SMART SM00382 38 247 2.7E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07070 ed309981958451ffd161dfed1a341e52 260 PANTHER PTHR24220:SF585 15 258 1.4E-139 T 20-04-2016 APRE_RS08605 66e60e9c62957406ac948e970265d345 626 Pfam PF03169 OPT oligopeptide transporter protein 12 574 8.6E-107 T 20-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APRE_RS08605 66e60e9c62957406ac948e970265d345 626 PANTHER PTHR31645 7 606 1.5E-130 T 20-04-2016 APRE_RS08605 66e60e9c62957406ac948e970265d345 626 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 13 573 3.3E-127 T 20-04-2016 IPR004814 Oligopeptide transporter OPT APRE_RS08605 66e60e9c62957406ac948e970265d345 626 PANTHER PTHR31645:SF0 7 606 1.5E-130 T 20-04-2016 APRE_RS08605 66e60e9c62957406ac948e970265d345 626 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 10 574 9.9E-72 T 20-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 Pfam PF08245 Mur ligase middle domain 54 285 1.0E-22 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 SUPERFAMILY SSF53623 40 191 5.5E-34 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 SUPERFAMILY SSF53623 242 301 5.5E-34 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 PANTHER PTHR23135:SF7 33 227 1.6E-99 T 20-04-2016 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 PANTHER PTHR23135:SF7 257 438 1.6E-99 T 20-04-2016 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 Pfam PF08353 Domain of unknown function (DUF1727) 323 433 5.7E-32 T 20-04-2016 IPR013564 Domain of unknown function DUF1727 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 PANTHER PTHR23135 33 227 1.6E-99 T 20-04-2016 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 PANTHER PTHR23135 257 438 1.6E-99 T 20-04-2016 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 Gene3D G3DSA:3.40.1190.10 227 304 5.1E-42 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS05030 bfff1e9660f561b9bf6b960eceb30ed5 443 Gene3D G3DSA:3.40.1190.10 39 189 5.1E-42 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS00990 7d617e6630dfd0fb9de518564e74664d 86 PANTHER PTHR33434 17 80 2.3E-12 T 20-04-2016 APRE_RS00990 7d617e6630dfd0fb9de518564e74664d 86 PANTHER PTHR33434:SF4 17 80 2.3E-12 T 20-04-2016 APRE_RS00990 7d617e6630dfd0fb9de518564e74664d 86 Pfam PF13684 Dihydroxyacetone kinase family 6 83 8.2E-20 T 20-04-2016 IPR033470 Uncharacterised protein, DhaK domain APRE_RS07335 e096a83191824a1505788703f021e1a2 854 Gene3D G3DSA:3.50.50.60 634 692 9.3E-10 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 Gene3D G3DSA:1.10.1060.10 448 541 8.9E-15 T 20-04-2016 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 Gene3D G3DSA:1.10.1060.10 703 784 5.8E-11 T 20-04-2016 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 SUPERFAMILY SSF51905 536 692 6.8E-22 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 448 529 1.8E-10 T 20-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APRE_RS07335 e096a83191824a1505788703f021e1a2 854 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 770 781 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS07335 e096a83191824a1505788703f021e1a2 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 540 682 3.3E-11 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 648 670 2.5E-5 T 20-04-2016 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 546 564 2.5E-5 T 20-04-2016 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 623 639 2.5E-5 T 20-04-2016 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 SUPERFAMILY SSF46548 447 554 3.3E-9 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 SUPERFAMILY SSF54862 726 791 7.53E-8 T 20-04-2016 APRE_RS07335 e096a83191824a1505788703f021e1a2 854 Gene3D G3DSA:3.50.50.60 542 633 9.7E-16 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS03775 86978033f759d82e2ce5db73db0ac808 100 SUPERFAMILY SSF52540 2 99 4.4E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03775 86978033f759d82e2ce5db73db0ac808 100 Gene3D G3DSA:3.40.50.300 3 100 4.8E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03775 86978033f759d82e2ce5db73db0ac808 100 Pfam PF00005 ABC transporter 3 83 3.8E-12 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03775 86978033f759d82e2ce5db73db0ac808 100 PANTHER PTHR24220:SF453 1 100 1.9E-39 T 20-04-2016 APRE_RS03775 86978033f759d82e2ce5db73db0ac808 100 PANTHER PTHR24220 1 100 1.9E-39 T 20-04-2016 APRE_RS05175 52d8713d61d74502cc9b43d6f4e97a42 79 Pfam PF01990 ATP synthase (F/14-kDa) subunit 9 77 2.2E-9 T 20-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 APRE_RS05175 52d8713d61d74502cc9b43d6f4e97a42 79 SUPERFAMILY SSF159468 9 77 1.23E-11 T 20-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 APRE_RS05175 52d8713d61d74502cc9b43d6f4e97a42 79 Gene3D G3DSA:3.40.50.10580 9 77 1.1E-8 T 20-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 APRE_RS08735 2abc079ff55dab7ad2dae6c91335e572 392 PANTHER PTHR30535 1 392 5.4E-47 T 20-04-2016 APRE_RS08735 2abc079ff55dab7ad2dae6c91335e572 392 Gene3D G3DSA:3.40.50.1980 48 192 3.6E-7 T 20-04-2016 APRE_RS08735 2abc079ff55dab7ad2dae6c91335e572 392 Gene3D G3DSA:3.40.50.1980 196 372 6.2E-31 T 20-04-2016 APRE_RS08735 2abc079ff55dab7ad2dae6c91335e572 392 SUPERFAMILY SSF53807 53 388 8.63E-46 T 20-04-2016 APRE_RS08735 2abc079ff55dab7ad2dae6c91335e572 392 Pfam PF01497 Periplasmic binding protein 97 339 2.7E-24 T 20-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APRE_RS08735 2abc079ff55dab7ad2dae6c91335e572 392 PANTHER PTHR30535:SF13 1 392 5.4E-47 T 20-04-2016 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 179 1.6E-65 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 PIRSF PIRSF000105 1 280 1.2E-90 T 20-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 Gene3D G3DSA:1.10.1040.10 184 279 1.2E-36 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 179 203 - T 20-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 SUPERFAMILY SSF48179 181 280 8.25E-33 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 SUPERFAMILY SSF51735 2 179 8.17E-58 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 182 278 3.5E-36 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 Gene3D G3DSA:3.40.50.720 1 183 6.2E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06930 1cb40e9345e1ea4a5f362584f895d313 280 PANTHER PTHR23309 2 280 4.5E-147 T 20-04-2016 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 134 4.0E-65 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 135 38.549 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.8E-57 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.8E-57 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.8E-57 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.8E-57 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.8E-57 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.8E-57 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 Gene3D G3DSA:2.40.50.140 1 134 2.0E-61 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 SUPERFAMILY SSF50249 3 134 6.43E-47 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PIRSF PIRSF002133 1 135 1.5E-49 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 PANTHER PTHR11652 1 129 7.5E-70 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS02425 c554f1311b9ea19bdbd45657514727d1 135 Pfam PF00164 Ribosomal protein S12/S23 2 134 3.2E-39 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 SUPERFAMILY SSF55326 3 153 1.64E-36 T 20-04-2016 APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 PANTHER PTHR10256 9 336 4.2E-92 T 20-04-2016 APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 Pfam PF02769 AIR synthase related protein, C-terminal domain 160 337 8.1E-29 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 Pfam PF00586 AIR synthase related protein, N-terminal domain 42 148 4.4E-16 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 PIRSF PIRSF036407 1 337 3.2E-103 T 20-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 Gene3D G3DSA:3.90.650.10 162 336 3.4E-21 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 TIGRFAM TIGR00476 selD: selenide, water dikinase 4 305 6.0E-105 T 20-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 Gene3D G3DSA:3.30.1330.10 26 153 1.7E-21 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APRE_RS01995 f75227a1d794dfb4f60e9929b58cf52b 337 SUPERFAMILY SSF56042 156 334 5.53E-46 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 PANTHER PTHR10584:SF170 1 301 5.9E-72 T 20-04-2016 APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 PANTHER PTHR10584 1 301 5.9E-72 T 20-04-2016 APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 PIRSF PIRSF000535 1 309 5.7E-60 T 20-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 Pfam PF00294 pfkB family carbohydrate kinase 27 286 3.4E-37 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 307 5.4E-79 T 20-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 SUPERFAMILY SSF53613 1 298 7.64E-55 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS02315 d419940e24231c76ebe3e3f738c18a75 310 Gene3D G3DSA:3.40.1190.20 35 309 1.9E-61 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 Pfam PF08402 TOBE domain 285 356 9.4E-5 T 20-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 SUPERFAMILY SSF50331 237 364 4.37E-22 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 PANTHER PTHR24220:SF151 5 317 6.0E-164 T 20-04-2016 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 SMART SM00382 29 217 7.2E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 PANTHER PTHR24220 5 317 6.0E-164 T 20-04-2016 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 Gene3D G3DSA:3.40.50.300 4 235 4.1E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 Gene3D G3DSA:2.40.50.100 240 289 6.0E-18 T 20-04-2016 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 Gene3D G3DSA:2.40.50.100 350 365 6.0E-18 T 20-04-2016 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 Gene3D G3DSA:2.40.50.140 290 349 1.3E-9 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 Pfam PF00005 ABC transporter 21 162 4.7E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS08555 eb8a1270dc5f1281694d43a3698f2242 366 SUPERFAMILY SSF52540 4 243 8.73E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 PANTHER PTHR24220 5 320 5.8E-164 T 20-04-2016 APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 PANTHER PTHR24220:SF151 5 320 5.8E-164 T 20-04-2016 APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 Pfam PF00005 ABC transporter 22 163 1.0E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 SUPERFAMILY SSF52540 4 256 7.39E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 SMART SM00382 30 214 5.2E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 Gene3D G3DSA:2.40.50.140 298 360 7.6E-11 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 Gene3D G3DSA:2.40.50.100 251 297 5.7E-21 T 20-04-2016 APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 Gene3D G3DSA:2.40.50.100 362 376 5.7E-21 T 20-04-2016 APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 Gene3D G3DSA:3.40.50.300 3 246 5.1E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01345 9becf17644c1e4d1299e49b5c30acab7 377 SUPERFAMILY SSF50331 248 376 8.5E-25 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APRE_RS01655 ee3960893b40aa548be18b141f9519d9 357 PANTHER PTHR21666 239 356 3.7E-26 T 20-04-2016 APRE_RS01655 ee3960893b40aa548be18b141f9519d9 357 Gene3D G3DSA:3.90.1720.10 236 347 1.1E-33 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS01655 ee3960893b40aa548be18b141f9519d9 357 Pfam PF00877 NlpC/P60 family 254 356 3.5E-20 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS01655 ee3960893b40aa548be18b141f9519d9 357 SUPERFAMILY SSF54001 238 354 2.35E-32 T 20-04-2016 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 SUPERFAMILY SSF57829 2 49 2.56E-19 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 4 49 1.6E-20 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 PANTHER PTHR15238:SF3 1 49 7.2E-19 T 20-04-2016 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 Pfam PF00471 Ribosomal protein L33 4 49 6.3E-23 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 20-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.313 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS05860 1393db0ddc5c6b36d4c1e945dd1f8b4b 49 PANTHER PTHR15238 1 49 7.2E-19 T 20-04-2016 APRE_RS01915 200602816142559a6fd3156262ef17c7 100 SUPERFAMILY SSF46785 2 87 3.1E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01915 200602816142559a6fd3156262ef17c7 100 Gene3D G3DSA:1.10.10.10 4 87 2.2E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01915 200602816142559a6fd3156262ef17c7 100 Pfam PF12840 Helix-turn-helix domain 12 68 6.1E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01915 200602816142559a6fd3156262ef17c7 100 SMART SM00418 10 91 1.6E-28 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS01915 200602816142559a6fd3156262ef17c7 100 PANTHER PTHR33154 4 100 6.8E-25 T 20-04-2016 APRE_RS01915 200602816142559a6fd3156262ef17c7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.1E-18 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS01915 200602816142559a6fd3156262ef17c7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.1E-18 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS01915 200602816142559a6fd3156262ef17c7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.1E-18 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS01915 200602816142559a6fd3156262ef17c7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 1.1E-18 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS04265 7633e3551ec44b2528480a4a6330e527 196 Pfam PF02195 ParB-like nuclease domain 12 93 3.7E-12 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APRE_RS04265 7633e3551ec44b2528480a4a6330e527 196 SUPERFAMILY SSF110849 7 135 4.81E-25 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APRE_RS04265 7633e3551ec44b2528480a4a6330e527 196 SMART SM00470 9 94 7.5E-13 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APRE_RS04265 7633e3551ec44b2528480a4a6330e527 196 Gene3D G3DSA:3.90.1530.10 3 93 1.7E-16 T 20-04-2016 APRE_RS01060 bb1eb804fb4b9421e68e9233f51401e0 75 Pfam PF06107 Bacterial protein of unknown function (DUF951) 4 57 1.6E-25 T 20-04-2016 IPR009296 Protein of unknown function DUF951 APRE_RS01060 bb1eb804fb4b9421e68e9233f51401e0 75 PIRSF PIRSF037263 1 64 1.8E-25 T 20-04-2016 IPR009296 Protein of unknown function DUF951 APRE_RS01060 bb1eb804fb4b9421e68e9233f51401e0 75 PANTHER PTHR38455 1 68 4.0E-22 T 20-04-2016 APRE_RS01060 bb1eb804fb4b9421e68e9233f51401e0 75 PANTHER PTHR38455:SF1 1 68 4.0E-22 T 20-04-2016 APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 SMART SM00382 27 261 6.6E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 SMART SM00382 275 468 5.2E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 SUPERFAMILY SSF52540 265 471 9.65E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 SUPERFAMILY SSF52540 3 224 8.65E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 PANTHER PTHR24220 4 375 9.2E-162 T 20-04-2016 APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 ProSitePatterns PS00211 ABC transporters family signature. 393 407 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 PANTHER PTHR24220:SF416 4 375 9.2E-162 T 20-04-2016 APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 Pfam PF00005 ABC transporter 267 420 2.9E-20 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 Pfam PF00005 ABC transporter 18 167 1.4E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 Gene3D G3DSA:3.40.50.300 2 228 9.4E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08295 02d24ae2b602368acc5cf4d515f59147 493 Gene3D G3DSA:3.40.50.300 261 474 5.9E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 SMART SM00347 32 146 5.6E-12 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 Pfam PF01047 MarR family 39 99 2.2E-11 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 PANTHER PTHR33164 6 158 5.0E-19 T 20-04-2016 APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 SUPERFAMILY SSF46785 2 151 1.17E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 Gene3D G3DSA:1.10.10.10 5 151 2.3E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.6E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.6E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08770 c2212418a14572ee93a78220fc4558f5 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.6E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 SUPERFAMILY SSF46997 1848 1911 2.2E-9 T 20-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 SUPERFAMILY SSF46997 1700 1763 8.27E-10 T 20-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF07554 Uncharacterised Sugar-binding Domain 1630 1677 3.4E-10 T 20-04-2016 IPR011490 FIVAR domain APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF07554 Uncharacterised Sugar-binding Domain 1556 1602 1.9E-9 T 20-04-2016 IPR011490 FIVAR domain APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF07554 Uncharacterised Sugar-binding Domain 1854 1900 9.2E-10 T 20-04-2016 IPR011490 FIVAR domain APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF07554 Uncharacterised Sugar-binding Domain 1780 1826 9.2E-10 T 20-04-2016 IPR011490 FIVAR domain APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF07554 Uncharacterised Sugar-binding Domain 1706 1752 4.6E-9 T 20-04-2016 IPR011490 FIVAR domain APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 SUPERFAMILY SSF46997 1550 1613 1.46E-10 T 20-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF08428 Rib/alpha-like repeat 123 170 1.9E-6 T 20-04-2016 IPR012706 Rib/alpha/Esp surface antigen APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 SUPERFAMILY SSF46997 1625 1688 4.92E-10 T 20-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1171 1236 3.3E-7 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1098 1129 0.076 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Gene3D G3DSA:1.20.5.420 1697 1764 4.8E-18 T 20-04-2016 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Gene3D G3DSA:1.20.5.420 1549 1614 4.1E-19 T 20-04-2016 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Gene3D G3DSA:1.20.5.420 1845 1912 1.8E-17 T 20-04-2016 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Gene3D G3DSA:1.20.5.420 1622 1689 3.9E-18 T 20-04-2016 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 Gene3D G3DSA:1.20.5.420 1771 1838 1.5E-17 T 20-04-2016 APRE_RS07250 7f0842178801692c49851ccd85c21278 2126 SUPERFAMILY SSF46997 1774 1837 1.78E-9 T 20-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 Gene3D G3DSA:3.40.50.300 339 578 2.7E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 Pfam PF00005 ABC transporter 356 503 3.2E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 Gene3D G3DSA:1.20.1560.10 3 319 3.8E-44 T 20-04-2016 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 PANTHER PTHR24221 1 580 2.0E-144 T 20-04-2016 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 SUPERFAMILY SSF90123 4 320 1.03E-54 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 SUPERFAMILY SSF52540 335 575 9.35E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 SMART SM00382 365 551 7.0E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 Pfam PF00664 ABC transporter transmembrane region 17 293 5.4E-26 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS02240 58e328c579ce17b2c351a74b21ca4984 583 PANTHER PTHR24221:SF240 1 580 2.0E-144 T 20-04-2016 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 Gene3D G3DSA:3.30.230.10 3 155 3.1E-43 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 276 29.131 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 PANTHER PTHR20861 7 265 4.1E-61 T 20-04-2016 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 SUPERFAMILY SSF55060 162 268 4.03E-14 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 Gene3D G3DSA:3.30.70.890 160 271 1.1E-18 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 Pfam PF00288 GHMP kinases N terminal domain 83 139 1.7E-5 T 20-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 SUPERFAMILY SSF54211 4 154 1.82E-33 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 PIRSF PIRSF010376 1 276 1.4E-72 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 PANTHER PTHR20861:SF2 7 265 4.1E-61 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 263 3.6E-62 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APRE_RS02600 855e69e45ff481ea485d8961d57a6355 278 Pfam PF08544 GHMP kinases C terminal 212 267 2.9E-7 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 Gene3D G3DSA:2.30.42.10 108 188 1.8E-20 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 SUPERFAMILY SSF50156 94 172 8.82E-14 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 Pfam PF03572 Peptidase family S41 208 368 5.1E-55 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 381 1.4E-97 T 20-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 SMART SM00245 180 369 8.4E-63 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 Gene3D G3DSA:3.90.226.10 189 399 1.0E-66 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 SMART SM00228 102 174 5.0E-13 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 SUPERFAMILY SSF52096 52 121 6.46E-70 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 SUPERFAMILY SSF52096 202 373 6.46E-70 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 PANTHER PTHR32060 57 370 7.7E-107 T 20-04-2016 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 Gene3D G3DSA:3.30.750.44 60 107 4.3E-8 T 20-04-2016 APRE_RS01465 fff23f3ef300ccd73d8e1424d685362b 401 Pfam PF13180 PDZ domain 103 176 6.1E-12 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS05130 01abe264caf7a2504a3fbd893e325728 172 PANTHER PTHR32315 3 172 6.8E-78 T 20-04-2016 APRE_RS05130 01abe264caf7a2504a3fbd893e325728 172 Pfam PF00156 Phosphoribosyl transferase domain 31 148 1.6E-14 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APRE_RS05130 01abe264caf7a2504a3fbd893e325728 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 36.547 T 20-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APRE_RS05130 01abe264caf7a2504a3fbd893e325728 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 1.3E-66 T 20-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APRE_RS05130 01abe264caf7a2504a3fbd893e325728 172 Gene3D G3DSA:3.40.50.2020 2 171 1.6E-65 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS05130 01abe264caf7a2504a3fbd893e325728 172 SUPERFAMILY SSF53271 2 164 2.56E-48 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS01955 4ed70f4d580fe220f7359c690ab7b39b 190 PANTHER PTHR19136 2 187 2.8E-34 T 20-04-2016 APRE_RS01955 4ed70f4d580fe220f7359c690ab7b39b 190 PANTHER PTHR19136:SF78 2 187 2.8E-34 T 20-04-2016 APRE_RS01955 4ed70f4d580fe220f7359c690ab7b39b 190 Gene3D G3DSA:3.90.550.10 1 187 1.2E-29 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS01955 4ed70f4d580fe220f7359c690ab7b39b 190 Pfam PF12804 MobA-like NTP transferase domain 5 154 8.0E-33 T 20-04-2016 IPR025877 MobA-like NTP transferase APRE_RS01955 4ed70f4d580fe220f7359c690ab7b39b 190 SUPERFAMILY SSF53448 1 185 2.16E-24 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 Gene3D G3DSA:1.20.1560.10 16 343 3.2E-81 T 20-04-2016 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 SMART SM00382 384 555 5.0E-16 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 Pfam PF00005 ABC transporter 376 523 2.2E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 PANTHER PTHR24221:SF271 3 597 2.2E-270 T 20-04-2016 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 Pfam PF00664 ABC transporter transmembrane region 30 314 1.1E-55 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 SUPERFAMILY SSF90123 13 343 2.09E-81 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 SUPERFAMILY SSF52540 348 594 8.84E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 PANTHER PTHR24221 3 597 2.2E-270 T 20-04-2016 APRE_RS02235 e6d0faf642d7441f34a8410e80a3b52a 597 Gene3D G3DSA:3.40.50.300 358 586 2.6E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 SUPERFAMILY SSF89095 292 398 4.97E-28 T 20-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 PANTHER PTHR11659 4 472 3.2E-213 T 20-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 471 34.99 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 Pfam PF02934 GatB/GatE catalytic domain 6 283 1.1E-107 T 20-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 PANTHER PTHR11659:SF0 4 472 3.2E-213 T 20-04-2016 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 139 153 - T 20-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 470 3.3E-167 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 Gene3D G3DSA:1.10.10.410 416 470 7.5E-4 T 20-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 SMART SM00845 323 470 1.5E-62 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 Pfam PF02637 GatB domain 323 470 3.0E-45 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APRE_RS04995 821f5c60566be3beab92aa55139d5843 472 SUPERFAMILY SSF55931 5 291 3.27E-107 T 20-04-2016 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 TIGRFAM TIGR00746 arcC: carbamate kinase 2 310 1.5E-114 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 Gene3D G3DSA:3.40.1160.10 1 310 1.6E-104 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PANTHER PTHR30409 1 310 1.5E-138 T 20-04-2016 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 SUPERFAMILY SSF53633 1 308 3.93E-78 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PANTHER PTHR30409:SF1 1 310 1.5E-138 T 20-04-2016 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 Pfam PF00696 Amino acid kinase family 2 283 1.0E-31 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 38 57 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 107 126 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 2.7E-55 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00145 fa4879350a9ca4e40177439b4d53ac1d 310 PIRSF PIRSF000723 1 310 4.4E-120 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS00210 1e1cf2059ae63d3a753e77e2bc36ee6f 322 Gene3D G3DSA:3.40.50.2300 161 286 1.2E-40 T 20-04-2016 APRE_RS00210 1e1cf2059ae63d3a753e77e2bc36ee6f 322 Pfam PF04392 ABC transporter substrate binding protein 39 321 2.6E-70 T 20-04-2016 IPR007487 ABC transporter, substrate-binding protein APRE_RS00210 1e1cf2059ae63d3a753e77e2bc36ee6f 322 Gene3D G3DSA:3.40.50.2300 37 160 2.3E-35 T 20-04-2016 APRE_RS00210 1e1cf2059ae63d3a753e77e2bc36ee6f 322 PANTHER PTHR35271 33 322 2.3E-51 T 20-04-2016 APRE_RS00210 1e1cf2059ae63d3a753e77e2bc36ee6f 322 SUPERFAMILY SSF53822 53 259 2.36E-8 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 144 514 1.3E-159 T 20-04-2016 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Gene3D G3DSA:3.40.950.10 433 504 5.0E-9 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 SUPERFAMILY SSF54292 1 79 2.75E-14 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 PANTHER PTHR11615 3 577 4.1E-149 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 2.0E-14 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Pfam PF02256 Iron hydrogenase small subunit 521 573 1.5E-23 T 20-04-2016 IPR003149 Iron hydrogenase, small subunit APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 81 1.3E-14 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 SUPERFAMILY SSF53920 194 572 8.37E-133 T 20-04-2016 IPR009016 Iron hydrogenase APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Gene3D G3DSA:3.30.70.20 137 199 1.7E-13 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 SMART SM00902 516 575 5.9E-24 T 20-04-2016 IPR003149 Iron hydrogenase, small subunit APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Pfam PF13187 4Fe-4S dicluster domain 150 208 2.2E-6 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 SMART SM00929 88 128 1.4E-15 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 226 510 2.6E-99 T 20-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Gene3D G3DSA:4.10.260.20 520 574 3.5E-23 T 20-04-2016 IPR003149 Iron hydrogenase, small subunit APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 SUPERFAMILY SSF54862 80 217 2.51E-35 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Gene3D G3DSA:3.10.20.30 3 57 1.2E-5 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 PANTHER PTHR11615:SF112 3 577 4.1E-149 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Gene3D G3DSA:3.40.50.1780 200 251 8.9E-75 T 20-04-2016 APRE_RS05535 d9bf0702165a68de7ade9ff0161cd9cc 577 Gene3D G3DSA:3.40.50.1780 303 432 8.9E-75 T 20-04-2016 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 Gene3D G3DSA:3.30.300.20 1 119 2.7E-38 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APRE_RS03200 77d518c18cb75de951698437dee4797d 128 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 20-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 93 5.0E-19 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 113 2.1E-32 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 PANTHER PTHR33515 1 128 1.1E-41 T 20-04-2016 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 Pfam PF02033 Ribosome-binding factor A 5 111 2.7E-31 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 118 22.363 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APRE_RS03200 77d518c18cb75de951698437dee4797d 128 SUPERFAMILY SSF89919 1 113 7.85E-33 T 20-04-2016 IPR023799 Ribosome-binding factor A domain APRE_RS03960 8250b36eef131c409395d279d42582e0 398 SUPERFAMILY SSF53748 1 397 1.11E-154 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 Pfam PF00162 Phosphoglycerate kinase 6 387 9.3E-163 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PANTHER PTHR11406 1 398 5.9E-215 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 20-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 Gene3D G3DSA:3.40.50.1270 184 385 1.3E-87 T 20-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 Gene3D G3DSA:3.40.50.1260 3 183 5.1E-71 T 20-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 397 42.421 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 317 342 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 142 164 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 34 56 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 114 129 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 195 214 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PRINTS PR00477 Phosphoglycerate kinase family signature 172 194 5.6E-92 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS03960 8250b36eef131c409395d279d42582e0 398 PIRSF PIRSF000724 1 398 1.1E-151 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APRE_RS05005 def43e90b5979ff22ec753fe6c6b1916 92 PANTHER PTHR15004:SF0 4 87 3.2E-13 T 20-04-2016 APRE_RS05005 def43e90b5979ff22ec753fe6c6b1916 92 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 22 87 2.6E-12 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APRE_RS05005 def43e90b5979ff22ec753fe6c6b1916 92 PANTHER PTHR15004 4 87 3.2E-13 T 20-04-2016 APRE_RS05005 def43e90b5979ff22ec753fe6c6b1916 92 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 1 87 2.8E-17 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APRE_RS05005 def43e90b5979ff22ec753fe6c6b1916 92 SUPERFAMILY SSF141000 2 87 3.4E-17 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APRE_RS06070 b8c526b941c0e01fa6564cb6e826e5c7 45 Pfam PF01527 Transposase 3 43 7.2E-7 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APRE_RS06070 b8c526b941c0e01fa6564cb6e826e5c7 45 SUPERFAMILY SSF46689 1 44 3.05E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS06070 b8c526b941c0e01fa6564cb6e826e5c7 45 Gene3D G3DSA:1.10.10.60 5 44 1.4E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS03180 c038055e945be1306b17283fa1db9886 147 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 147 17.686 T 20-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APRE_RS03180 c038055e945be1306b17283fa1db9886 147 Pfam PF02576 Putative ribosome maturation factor RimP 13 140 6.9E-26 T 20-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APRE_RS03180 c038055e945be1306b17283fa1db9886 147 Gene3D G3DSA:3.30.300.70 2 78 7.6E-23 T 20-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APRE_RS03180 c038055e945be1306b17283fa1db9886 147 PANTHER PTHR33867:SF1 1 147 1.1E-26 T 20-04-2016 APRE_RS03180 c038055e945be1306b17283fa1db9886 147 PANTHER PTHR33867 1 147 1.1E-26 T 20-04-2016 APRE_RS03180 c038055e945be1306b17283fa1db9886 147 SUPERFAMILY SSF75420 3 78 2.62E-18 T 20-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APRE_RS06555 be98f5c5e50a2d7665491b2cff4724af 209 SUPERFAMILY SSF53098 14 195 1.82E-59 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS06555 be98f5c5e50a2d7665491b2cff4724af 209 Gene3D G3DSA:3.30.420.10 20 159 7.1E-39 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS06555 be98f5c5e50a2d7665491b2cff4724af 209 PANTHER PTHR10954 14 209 5.3E-57 T 20-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APRE_RS06555 be98f5c5e50a2d7665491b2cff4724af 209 Pfam PF01351 Ribonuclease HII 22 196 4.1E-35 T 20-04-2016 IPR024567 Ribonuclease HII/HIII domain APRE_RS06555 be98f5c5e50a2d7665491b2cff4724af 209 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 198 32.94 T 20-04-2016 IPR022898 Ribonuclease HII GO:0004523 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 Gene3D G3DSA:3.40.50.1860 3 164 8.8E-41 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 Hamap MF_00258 Glutamate racemase [murI]. 2 240 25.335 T 20-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 PANTHER PTHR21198 1 248 2.1E-53 T 20-04-2016 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 174 184 - T 20-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 208 1.4E-49 T 20-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 202 8.1E-28 T 20-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 PANTHER PTHR21198:SF2 1 248 2.1E-53 T 20-04-2016 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 SUPERFAMILY SSF53681 3 98 6.87E-26 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS02605 b6b4d1fbea68f32863cb068c06e988d5 250 SUPERFAMILY SSF53681 105 241 6.98E-21 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APRE_RS08115 727b7e7004ba81decacd95f326fd1ba7 437 PANTHER PTHR33989 1 433 1.1E-148 T 20-04-2016 APRE_RS08115 727b7e7004ba81decacd95f326fd1ba7 437 PIRSF PIRSF006351 4 436 1.5E-120 T 20-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APRE_RS08115 727b7e7004ba81decacd95f326fd1ba7 437 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 431 1.8E-93 T 20-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APRE_RS08115 727b7e7004ba81decacd95f326fd1ba7 437 Pfam PF02378 Phosphotransferase system, EIIC 30 359 7.2E-43 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS08115 727b7e7004ba81decacd95f326fd1ba7 437 PANTHER PTHR33989:SF4 1 433 1.1E-148 T 20-04-2016 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PANTHER PTHR11946 3 604 1.2E-256 T 20-04-2016 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 527 647 1.0E-40 T 20-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 SUPERFAMILY SSF47323 351 560 2.94E-40 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 123 3.1E-6 T 20-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Gene3D G3DSA:1.10.730.10 340 507 1.6E-47 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Pfam PF08264 Anticodon-binding domain of tRNA 385 479 1.9E-8 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 507 3.3E-163 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Gene3D G3DSA:2.170.220.10 118 226 5.7E-43 T 20-04-2016 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PANTHER PTHR11946:SF1 3 604 1.2E-256 T 20-04-2016 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Pfam PF01588 Putative tRNA binding domain 553 645 1.0E-31 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PRINTS PR01041 Methionyl-tRNA synthetase signature 349 360 3.8E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 3.8E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PRINTS PR01041 Methionyl-tRNA synthetase signature 257 272 3.8E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 3.8E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PRINTS PR01041 Methionyl-tRNA synthetase signature 225 236 3.8E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 3.8E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Pfam PF09334 tRNA synthetases class I (M) 140 361 2.9E-67 T 20-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Gene3D G3DSA:3.40.50.620 4 115 3.0E-69 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Gene3D G3DSA:3.40.50.620 227 337 3.0E-69 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 SUPERFAMILY SSF50249 546 647 2.23E-37 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Hamap MF_01228 Methionine--tRNA ligase [metG]. 3 506 47.223 T 20-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 SUPERFAMILY SSF52374 4 348 1.18E-106 T 20-04-2016 APRE_RS07760 059dea70eca865490bf204a14fa4611c 648 Gene3D G3DSA:2.40.50.140 539 647 7.2E-43 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04500 42d212316a901952c4b0e5dbe00e180e 204 PANTHER PTHR35792:SF1 24 123 1.3E-14 T 20-04-2016 APRE_RS04500 42d212316a901952c4b0e5dbe00e180e 204 PANTHER PTHR35792 24 123 1.3E-14 T 20-04-2016 APRE_RS04500 42d212316a901952c4b0e5dbe00e180e 204 Pfam PF12732 YtxH-like protein 36 94 3.1E-19 T 20-04-2016 IPR024623 Uncharacterised protein family YtxH APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 SUPERFAMILY SSF57997 688 877 1.44E-7 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 996 1115 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 813 882 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 44 377 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 1258 1288 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 924 975 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 489 563 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 686 784 7.0E-18 T 20-04-2016 APRE_RS02140 05f887af9cb28025b7bdfd5c628a743d 1314 PANTHER PTHR18937 586 639 7.0E-18 T 20-04-2016 APRE_RS01285 f57e3dfc874587facbaf10701957bf3d 117 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 86 8.3E-8 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APRE_RS01285 f57e3dfc874587facbaf10701957bf3d 117 Gene3D G3DSA:1.10.10.10 3 115 1.8E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01285 f57e3dfc874587facbaf10701957bf3d 117 SUPERFAMILY SSF46785 4 106 5.1E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01285 f57e3dfc874587facbaf10701957bf3d 117 PANTHER PTHR30432 4 115 1.4E-13 T 20-04-2016 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 PANTHER PTHR10060 1 253 1.5E-97 T 20-04-2016 IPR001130 TatD family GO:0016788 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 SUPERFAMILY SSF51556 1 253 3.97E-83 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 Pfam PF01026 TatD related DNase 4 251 3.3E-76 T 20-04-2016 IPR001130 TatD family GO:0016788 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 Gene3D G3DSA:3.20.20.140 1 253 8.7E-87 T 20-04-2016 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 PANTHER PTHR10060:SF20 1 253 1.5E-97 T 20-04-2016 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 20-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 252 2.2E-81 T 20-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APRE_RS07755 e616b324748245fa8576bcf24cbfe05e 253 PIRSF PIRSF005902 1 253 1.8E-76 T 20-04-2016 IPR001130 TatD family GO:0016788 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Pfam PF00874 PRD domain 296 385 6.0E-17 T 20-04-2016 IPR011608 PRD domain GO:0006355 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Pfam PF00874 PRD domain 207 277 1.9E-15 T 20-04-2016 IPR011608 PRD domain GO:0006355 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 PANTHER PTHR30185:SF4 1 624 6.2E-91 T 20-04-2016 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Gene3D G3DSA:1.10.10.10 92 157 1.3E-7 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Pfam PF08279 HTH domain 5 63 1.3E-7 T 20-04-2016 IPR013196 Helix-turn-helix, type 11 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Pfam PF05043 Mga helix-turn-helix domain 88 166 2.5E-11 T 20-04-2016 IPR007737 Mga helix-turn-helix domain APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 SUPERFAMILY SSF63520 285 389 2.22E-19 T 20-04-2016 IPR011608 PRD domain GO:0006355 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Gene3D G3DSA:3.40.50.270 394 469 8.7E-8 T 20-04-2016 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Gene3D G3DSA:3.40.930.10 483 622 8.0E-15 T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Gene3D G3DSA:1.10.1790.10 182 277 3.6E-16 T 20-04-2016 IPR011608 PRD domain GO:0006355 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Gene3D G3DSA:1.10.1790.10 287 388 3.2E-21 T 20-04-2016 IPR011608 PRD domain GO:0006355 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 488 622 7.3E-11 T 20-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 SUPERFAMILY SSF63520 180 277 2.49E-17 T 20-04-2016 IPR011608 PRD domain GO:0006355 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 SUPERFAMILY SSF55804 485 624 6.28E-13 T 20-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 Gene3D G3DSA:1.10.10.10 3 64 1.5E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 PANTHER PTHR30185 1 624 6.2E-91 T 20-04-2016 APRE_RS08135 040139240dd6022d1a4b6ec241ad5b6d 625 SUPERFAMILY SSF52794 395 467 3.61E-7 T 20-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APRE_RS00615 846e619acdc99d104211d120e59ec9dc 182 Pfam PF04011 LemA family 6 180 5.8E-48 T 20-04-2016 IPR007156 LemA APRE_RS00615 846e619acdc99d104211d120e59ec9dc 182 PANTHER PTHR34478 1 180 2.2E-46 T 20-04-2016 APRE_RS00615 846e619acdc99d104211d120e59ec9dc 182 SUPERFAMILY SSF140478 25 170 3.79E-37 T 20-04-2016 IPR023353 LemA-like domain APRE_RS00615 846e619acdc99d104211d120e59ec9dc 182 PANTHER PTHR34478:SF2 1 180 2.2E-46 T 20-04-2016 APRE_RS00615 846e619acdc99d104211d120e59ec9dc 182 Gene3D G3DSA:1.20.1440.20 13 181 1.1E-44 T 20-04-2016 IPR023353 LemA-like domain APRE_RS02720 557839e98e099a844f2b7641cdd6ada9 142 SUPERFAMILY SSF46785 3 132 2.18E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02720 557839e98e099a844f2b7641cdd6ada9 142 Pfam PF01475 Ferric uptake regulator family 10 126 3.3E-24 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APRE_RS02720 557839e98e099a844f2b7641cdd6ada9 142 Gene3D G3DSA:1.10.10.10 3 80 1.6E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02720 557839e98e099a844f2b7641cdd6ada9 142 PANTHER PTHR33202 2 140 3.9E-31 T 20-04-2016 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 SUPERFAMILY SSF46785 305 393 6.4E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 SMART SM00418 307 385 1.5E-17 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 Gene3D G3DSA:1.10.10.10 300 389 1.3E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 PANTHER PTHR33154:SF1 265 397 8.1E-18 T 20-04-2016 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 309 324 8.2E-8 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 341 356 8.2E-8 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 356 371 8.2E-8 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 Pfam PF01022 Bacterial regulatory protein, arsR family 314 358 7.7E-12 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APRE_RS07780 08005c001babe5fe3cc35fc27a52952e 399 PANTHER PTHR33154 265 397 8.1E-18 T 20-04-2016 APRE_RS09150 62e01cd346a4e0b8fd76f700e0dc6bd1 161 Gene3D G3DSA:1.10.3720.10 3 160 4.1E-21 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS09150 62e01cd346a4e0b8fd76f700e0dc6bd1 161 SUPERFAMILY SSF161098 3 161 4.32E-24 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS09150 62e01cd346a4e0b8fd76f700e0dc6bd1 161 PANTHER PTHR30183 6 161 7.8E-14 T 20-04-2016 APRE_RS09150 62e01cd346a4e0b8fd76f700e0dc6bd1 161 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 6 160 6.5E-10 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS09150 62e01cd346a4e0b8fd76f700e0dc6bd1 161 PANTHER PTHR30183:SF7 6 161 7.8E-14 T 20-04-2016 APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 PANTHER PTHR31126:SF21 114 235 3.3E-18 T 20-04-2016 APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 PANTHER PTHR31126:SF21 10 91 3.3E-18 T 20-04-2016 APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 PANTHER PTHR31126 114 235 3.3E-18 T 20-04-2016 APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 PANTHER PTHR31126 10 91 3.3E-18 T 20-04-2016 APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 142 152 - T 20-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 Gene3D G3DSA:3.90.190.10 11 180 3.6E-19 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 SUPERFAMILY SSF52799 10 237 3.54E-35 T 20-04-2016 IPR029021 Protein-tyrosine phosphatase-like APRE_RS03510 2eae32ff44875cfcddea44de8456a9d4 240 Pfam PF13350 Tyrosine phosphatase family 10 238 9.3E-49 T 20-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type APRE_RS07815 d248d60a14cc5657062c6b6bd1864910 220 ProSitePatterns PS00211 ABC transporters family signature. 119 133 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07815 d248d60a14cc5657062c6b6bd1864910 220 SMART SM00382 28 195 7.0E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07815 d248d60a14cc5657062c6b6bd1864910 220 Pfam PF00005 ABC transporter 20 147 1.8E-19 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07815 d248d60a14cc5657062c6b6bd1864910 220 Gene3D G3DSA:3.40.50.300 2 208 1.3E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07815 d248d60a14cc5657062c6b6bd1864910 220 SUPERFAMILY SSF52540 3 207 3.09E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07815 d248d60a14cc5657062c6b6bd1864910 220 PANTHER PTHR24220 5 212 9.6E-55 T 20-04-2016 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 Gene3D G3DSA:3.30.420.80 7 131 2.2E-54 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 131 33.96 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 20-04-2016 IPR018102 Ribosomal S11, conserved site APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 SUPERFAMILY SSF53137 16 131 2.01E-48 T 20-04-2016 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 Pfam PF00411 Ribosomal protein S11 21 130 1.7E-48 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 4.6E-58 T 20-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 PIRSF PIRSF002131 1 131 2.0E-53 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APRE_RS07945 7d213c942cd003d43ca2eb0881172d5d 131 PANTHER PTHR11759 3 131 8.2E-66 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APRE_RS01950 9c26120a27daa7ecf4a87a6b7af91f9e 233 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 15 211 2.0E-34 T 20-04-2016 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC APRE_RS01950 9c26120a27daa7ecf4a87a6b7af91f9e 233 Gene3D G3DSA:3.40.1190.10 13 52 2.3E-4 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APRE_RS04475 cf0f62faf1a422753cceb5080af9bd83 167 SUPERFAMILY SSF49879 68 161 2.87E-24 T 20-04-2016 IPR008984 SMAD/FHA domain GO:0005515 APRE_RS04475 cf0f62faf1a422753cceb5080af9bd83 167 Gene3D G3DSA:2.60.200.20 76 165 1.9E-24 T 20-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APRE_RS04475 cf0f62faf1a422753cceb5080af9bd83 167 Pfam PF00498 FHA domain 91 154 1.2E-18 T 20-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APRE_RS04475 cf0f62faf1a422753cceb5080af9bd83 167 PANTHER PTHR15715 91 154 9.3E-19 T 20-04-2016 APRE_RS04475 cf0f62faf1a422753cceb5080af9bd83 167 SMART SM00240 89 139 2.7E-11 T 20-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 Gene3D G3DSA:1.10.540.10 1 119 1.3E-46 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.5E-26 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 PANTHER PTHR10909:SF305 1 376 1.0E-191 T 20-04-2016 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 Gene3D G3DSA:1.20.140.10 222 377 7.1E-68 T 20-04-2016 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.8E-41 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.3E-43 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 PANTHER PTHR10909 1 376 1.0E-191 T 20-04-2016 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 SUPERFAMILY SSF56645 3 242 1.44E-90 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 Gene3D G3DSA:2.40.110.10 122 221 1.5E-41 T 20-04-2016 APRE_RS00425 1fde3af82d6954fa43d5bd1afb5cac69 379 SUPERFAMILY SSF47203 227 375 1.93E-52 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APRE_RS07155 cc3b07b010fe3ac5b9b1ad2d19d7724d 209 Pfam PF02677 Uncharacterized BCR, COG1636 26 200 3.1E-62 T 20-04-2016 IPR003828 Protein of unknown function DUF208 APRE_RS07155 cc3b07b010fe3ac5b9b1ad2d19d7724d 209 PANTHER PTHR36701 10 209 2.0E-63 T 20-04-2016 APRE_RS04740 4dd5d79c2341cc5352d77f71ec7c01be 103 SUPERFAMILY SSF118010 1 102 3.4E-25 T 20-04-2016 APRE_RS04740 4dd5d79c2341cc5352d77f71ec7c01be 103 PANTHER PTHR39178 2 103 8.7E-14 T 20-04-2016 APRE_RS04740 4dd5d79c2341cc5352d77f71ec7c01be 103 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 97 3.6E-22 T 20-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 APRE_RS04740 4dd5d79c2341cc5352d77f71ec7c01be 103 Gene3D G3DSA:3.30.70.1490 9 101 2.6E-12 T 20-04-2016 APRE_RS01510 91536585aacc1bd975c837aa12cb9362 221 SUPERFAMILY SSF161098 12 206 7.59E-40 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01510 91536585aacc1bd975c837aa12cb9362 221 PANTHER PTHR30450:SF1 12 221 1.2E-81 T 20-04-2016 APRE_RS01510 91536585aacc1bd975c837aa12cb9362 221 Gene3D G3DSA:1.10.3720.10 11 219 3.6E-33 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01510 91536585aacc1bd975c837aa12cb9362 221 PANTHER PTHR30450 12 221 1.2E-81 T 20-04-2016 APRE_RS01510 91536585aacc1bd975c837aa12cb9362 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 218 2.5E-18 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 Gene3D G3DSA:1.20.1090.10 184 377 1.1E-69 T 20-04-2016 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 1.3E-115 T 20-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 20-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 Gene3D G3DSA:3.40.50.1970 3 183 1.6E-55 T 20-04-2016 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 20-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 SUPERFAMILY SSF56796 3 380 1.57E-116 T 20-04-2016 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 PANTHER PTHR11496 6 382 8.4E-171 T 20-04-2016 APRE_RS05410 f825a9eb322510c06bb26eb3081b37ef 384 PANTHER PTHR11496:SF79 6 382 8.4E-171 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 129 692 5.8E-163 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PANTHER PTHR24093 56 693 2.3E-199 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 Gene3D G3DSA:3.40.1110.10 417 512 4.3E-5 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 Gene3D G3DSA:2.70.150.10 133 296 6.5E-25 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 Gene3D G3DSA:3.40.50.1000 369 411 1.3E-44 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 Gene3D G3DSA:3.40.50.1000 513 652 1.3E-44 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PANTHER PTHR24093:SF332 56 693 2.3E-199 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 319 333 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 657 671 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 378 393 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 114 133 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 561 578 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 185 203 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00943 Copper-transporting ATPase signature 94 112 1.6E-13 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 395 409 4.9E-22 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 619 4.9E-22 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 603 4.9E-22 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 246 260 4.9E-22 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 542 4.9E-22 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 Pfam PF00702 haloacid dehalogenase-like hydrolase 392 598 2.9E-33 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 SUPERFAMILY SSF56784 453 689 8.64E-50 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 SUPERFAMILY SSF56784 395 413 8.64E-50 T 20-04-2016 IPR023214 HAD-like domain APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 111 693 6.6E-188 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 Pfam PF00122 E1-E2 ATPase 168 386 1.4E-54 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 397 403 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 SUPERFAMILY SSF81665 297 387 3.01E-10 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 SUPERFAMILY SSF81665 158 199 3.01E-10 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 663 5.7E-78 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 SUPERFAMILY SSF81653 202 296 1.7E-22 T 20-04-2016 APRE_RS02965 8b23e13255fcac4f9b8f3f1e951995dd 697 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 157 692 4.6E-107 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 436 750 8.6E-15 T 20-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 PANTHER PTHR11607 436 591 4.9E-154 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 PANTHER PTHR11607 2 414 4.9E-154 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 PANTHER PTHR11607 616 807 4.9E-154 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 PANTHER PTHR11607:SF26 436 591 4.9E-154 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 PANTHER PTHR11607:SF26 2 414 4.9E-154 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 PANTHER PTHR11607:SF26 616 807 4.9E-154 T 20-04-2016 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 Gene3D G3DSA:3.20.110.10 2 282 1.6E-39 T 20-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 SUPERFAMILY SSF88688 294 387 2.65E-10 T 20-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 4 272 2.7E-29 T 20-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 Gene3D G3DSA:1.20.1270.50 294 390 4.2E-6 T 20-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 SUPERFAMILY SSF74650 623 872 5.02E-37 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 SUPERFAMILY SSF74650 383 590 5.02E-37 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 Pfam PF09261 Alpha mannosidase middle domain 294 360 6.8E-6 T 20-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 SMART SM00872 292 364 7.6E-7 T 20-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 APRE_RS00760 ccd300b1829941189bba6aefebd4a3e3 873 SUPERFAMILY SSF88713 2 280 8.89E-52 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 SUPERFAMILY SSF46785 2 130 9.5E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 PANTHER PTHR33221 2 132 2.5E-39 T 20-04-2016 APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 20-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 Gene3D G3DSA:1.10.10.10 1 131 1.1E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 Pfam PF02082 Transcriptional regulator 1 82 4.8E-26 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.3E-34 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APRE_RS04780 dbba6f39d827e4d4bf28583b81424ecf 133 PANTHER PTHR33221:SF1 2 132 2.5E-39 T 20-04-2016 APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 PANTHER PTHR24031:SF261 1 512 1.6E-184 T 20-04-2016 APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 PANTHER PTHR24031 1 512 1.6E-184 T 20-04-2016 APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 Pfam PF00270 DEAD/DEAH box helicase 26 190 5.7E-49 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 SMART SM00490 253 334 5.5E-30 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 SUPERFAMILY SSF52540 70 355 2.72E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 Pfam PF00271 Helicase conserved C-terminal domain 227 334 4.4E-28 T 20-04-2016 IPR001650 Helicase, C-terminal APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 Pfam PF03880 DbpA RNA binding domain 462 532 1.6E-16 T 20-04-2016 IPR005580 DbpA, RNA-binding domain APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 Gene3D G3DSA:3.40.50.300 1 207 2.5E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 20-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 Gene3D G3DSA:3.40.50.300 208 367 2.2E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05525 d8aea7f43a82d24f5e3cfcf50900b56b 536 SMART SM00487 20 217 4.1E-66 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS07720 02cf2157c3970d414a549f9b8f249e0a 430 SUPERFAMILY SSF51735 17 155 2.45E-13 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07720 02cf2157c3970d414a549f9b8f249e0a 430 Gene3D G3DSA:3.40.50.720 17 131 1.5E-10 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS07720 02cf2157c3970d414a549f9b8f249e0a 430 PANTHER PTHR37850 2 428 1.7E-123 T 20-04-2016 APRE_RS07720 02cf2157c3970d414a549f9b8f249e0a 430 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 18 131 1.5E-5 T 20-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APRE_RS07720 02cf2157c3970d414a549f9b8f249e0a 430 PANTHER PTHR37850:SF2 2 428 1.7E-123 T 20-04-2016 APRE_RS03330 ac9949594054ad2b6cac2df23214bad3 483 PANTHER PTHR33393 133 386 1.5E-52 T 20-04-2016 APRE_RS03330 ac9949594054ad2b6cac2df23214bad3 483 PANTHER PTHR33393:SF2 133 386 1.5E-52 T 20-04-2016 APRE_RS03330 ac9949594054ad2b6cac2df23214bad3 483 Gene3D G3DSA:3.60.21.10 136 430 3.8E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS03330 ac9949594054ad2b6cac2df23214bad3 483 SUPERFAMILY SSF56300 141 391 8.06E-41 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS03330 ac9949594054ad2b6cac2df23214bad3 483 SMART SM00854 141 389 7.2E-84 T 20-04-2016 IPR019079 Capsule synthesis protein, CapA APRE_RS03330 ac9949594054ad2b6cac2df23214bad3 483 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 142 389 5.3E-72 T 20-04-2016 IPR019079 Capsule synthesis protein, CapA APRE_RS03560 ca2ba327dd432dc19348306aafe67afe 113 Gene3D G3DSA:1.20.5.780 6 45 4.2E-4 T 20-04-2016 APRE_RS03560 ca2ba327dd432dc19348306aafe67afe 113 Pfam PF05713 Bacterial mobilisation protein (MobC) 66 104 1.9E-5 T 20-04-2016 IPR008687 Bacterial mobilisation APRE_RS05710 ea42d3fc767a8a497473642122a1bbe3 319 Pfam PF06081 Aromatic acid exporter family member 1 6 142 2.7E-36 T 20-04-2016 IPR010343 Aromatic acid exporter family member 1 APRE_RS05710 ea42d3fc767a8a497473642122a1bbe3 319 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 148 309 3.7E-35 T 20-04-2016 IPR021062 Putative aromatic acid exporter, C-terminal APRE_RS05710 ea42d3fc767a8a497473642122a1bbe3 319 PANTHER PTHR40064 3 319 6.3E-64 T 20-04-2016 APRE_RS05710 ea42d3fc767a8a497473642122a1bbe3 319 PANTHER PTHR40064:SF1 3 319 6.3E-64 T 20-04-2016 APRE_RS05740 d65cb58abe8002e78a51ba4c6abfd0ea 109 Pfam PF06153 Cyclic-di-AMP receptor 1 108 1.5E-41 T 20-04-2016 IPR010375 Cyclic-di-AMP receptor APRE_RS05740 d65cb58abe8002e78a51ba4c6abfd0ea 109 Gene3D G3DSA:3.30.70.120 1 108 8.0E-15 T 20-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APRE_RS05740 d65cb58abe8002e78a51ba4c6abfd0ea 109 SUPERFAMILY SSF54913 1 108 9.53E-13 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APRE_RS05740 d65cb58abe8002e78a51ba4c6abfd0ea 109 PANTHER PTHR38456 2 109 7.5E-36 T 20-04-2016 APRE_RS07660 5ec5f80ca183d0679afac9b3f0789b36 189 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 15 187 4.7E-62 T 20-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APRE_RS07660 5ec5f80ca183d0679afac9b3f0789b36 189 Gene3D G3DSA:3.20.20.400 4 189 2.3E-66 T 20-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APRE_RS07660 5ec5f80ca183d0679afac9b3f0789b36 189 PIRSF PIRSF016897 4 189 1.9E-61 T 20-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APRE_RS07660 5ec5f80ca183d0679afac9b3f0789b36 189 PANTHER PTHR35787 5 189 2.6E-58 T 20-04-2016 APRE_RS07660 5ec5f80ca183d0679afac9b3f0789b36 189 SUPERFAMILY SSF110391 14 189 2.62E-54 T 20-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 3.4E-40 T 20-04-2016 IPR031309 Ribosomal protein L5, C-terminal APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 42.817 T 20-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 PIRSF PIRSF002161 1 180 1.9E-67 T 20-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 Gene3D G3DSA:3.30.1440.10 3 180 1.3E-73 T 20-04-2016 IPR022803 Ribosomal protein L5 domain APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 Pfam PF00281 Ribosomal protein L5 25 81 3.7E-24 T 20-04-2016 IPR031310 Ribosomal protein L5, N-terminal APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 PANTHER PTHR11994 1 179 8.2E-87 T 20-04-2016 APRE_RS08010 762db9d5346b6df0f6f2f13c58595be1 180 SUPERFAMILY SSF55282 4 180 6.36E-74 T 20-04-2016 IPR022803 Ribosomal protein L5 domain APRE_RS03845 3013e79ee1a5a35e96f2f95d878b8bdb 811 Pfam PF02687 FtsX-like permease family 260 377 6.1E-15 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APRE_RS03845 3013e79ee1a5a35e96f2f95d878b8bdb 811 PANTHER PTHR30489 155 385 2.2E-22 T 20-04-2016 APRE_RS03845 3013e79ee1a5a35e96f2f95d878b8bdb 811 PANTHER PTHR30489 8 139 2.2E-22 T 20-04-2016 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 PANTHER PTHR11958:SF53 110 392 1.4E-47 T 20-04-2016 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 Pfam PF00375 Sodium:dicarboxylate symporter family 9 388 1.9E-73 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 PANTHER PTHR11958 110 392 1.4E-47 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 Gene3D G3DSA:1.10.3860.10 2 392 5.3E-69 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 SUPERFAMILY SSF118215 9 388 1.1E-79 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 PRINTS PR00173 Glutamate-aspartate symporter signature 314 333 3.1E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 3.1E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 3.1E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS00495 0d730770bd131aacb60cc7e3c5a31af8 408 PRINTS PR00173 Glutamate-aspartate symporter signature 279 305 3.1E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02690 724099bc3505a5d04272110b21a4ad7a 287 SUPERFAMILY SSF51735 8 279 5.62E-58 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02690 724099bc3505a5d04272110b21a4ad7a 287 Gene3D G3DSA:3.40.50.720 7 231 1.2E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS02690 724099bc3505a5d04272110b21a4ad7a 287 PANTHER PTHR10491 1 280 4.0E-57 T 20-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APRE_RS02690 724099bc3505a5d04272110b21a4ad7a 287 Pfam PF04321 RmlD substrate binding domain 8 280 3.9E-58 T 20-04-2016 IPR029903 RmlD-like substrate binding domain APRE_RS02690 724099bc3505a5d04272110b21a4ad7a 287 PANTHER PTHR10491:SF4 1 280 4.0E-57 T 20-04-2016 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 348 529 3.0E-10 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 254 7.8E-13 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 Gene3D G3DSA:1.10.3720.10 287 529 1.2E-27 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 PANTHER PTHR30183 1 534 9.6E-47 T 20-04-2016 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 Gene3D G3DSA:1.10.3720.10 8 255 1.2E-31 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 SUPERFAMILY SSF161098 290 525 3.01E-31 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00260 7a484ef4eafb45ad668ca61cd1bcd9b0 545 SUPERFAMILY SSF161098 7 256 1.68E-38 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07895 41013e58acbb267bf9ec622029ae89c2 363 PANTHER PTHR21021:SF19 134 362 3.4E-33 T 20-04-2016 APRE_RS07895 41013e58acbb267bf9ec622029ae89c2 363 PANTHER PTHR21021 134 362 3.4E-33 T 20-04-2016 APRE_RS07895 41013e58acbb267bf9ec622029ae89c2 363 SUPERFAMILY SSF55785 13 108 1.47E-5 T 20-04-2016 IPR000014 PAS domain APRE_RS07895 41013e58acbb267bf9ec622029ae89c2 363 Gene3D G3DSA:3.30.450.20 15 108 1.1E-4 T 20-04-2016 APRE_RS07895 41013e58acbb267bf9ec622029ae89c2 363 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 172 360 3.2E-33 T 20-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APRE_RS07895 41013e58acbb267bf9ec622029ae89c2 363 SMART SM00331 139 360 1.2E-21 T 20-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APRE_RS02845 c2fc9531c8a1ffaefa817809c0d92635 232 PANTHER PTHR32309 1 229 2.9E-24 T 20-04-2016 APRE_RS02845 c2fc9531c8a1ffaefa817809c0d92635 232 Pfam PF02706 Chain length determinant protein 4 146 9.7E-29 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APRE_RS02845 c2fc9531c8a1ffaefa817809c0d92635 232 Pfam PF13807 G-rich domain on putative tyrosine kinase 156 201 4.3E-7 T 20-04-2016 IPR032807 Tyrosine kinase, G-rich domain APRE_RS00310 40ae510dce03674d6543e1d0cce7e7a3 285 PANTHER PTHR30193 1 276 3.3E-84 T 20-04-2016 APRE_RS00310 40ae510dce03674d6543e1d0cce7e7a3 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 9.0E-10 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00310 40ae510dce03674d6543e1d0cce7e7a3 285 SUPERFAMILY SSF161098 50 273 1.22E-55 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00310 40ae510dce03674d6543e1d0cce7e7a3 285 Gene3D G3DSA:1.20.58.370 8 31 9.8E-4 T 20-04-2016 APRE_RS00310 40ae510dce03674d6543e1d0cce7e7a3 285 Gene3D G3DSA:1.10.3720.10 56 277 5.8E-56 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00310 40ae510dce03674d6543e1d0cce7e7a3 285 PANTHER PTHR30193:SF6 1 276 3.3E-84 T 20-04-2016 APRE_RS01050 47e909fb5f1a798bf02609b809a6becf 173 SUPERFAMILY SSF52266 2 171 4.43E-27 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS01050 47e909fb5f1a798bf02609b809a6becf 173 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 142 2.7E-14 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS01050 47e909fb5f1a798bf02609b809a6becf 173 PANTHER PTHR30383 3 171 3.1E-13 T 20-04-2016 APRE_RS01050 47e909fb5f1a798bf02609b809a6becf 173 Gene3D G3DSA:3.40.50.1110 2 172 1.2E-23 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 278 30.315 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 276 3.4E-79 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 564 583 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 296 314 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 486 507 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 314 328 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 362 381 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 603 621 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 404 421 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PRINTS PR00681 Ribosomal protein S1 signature 386 402 5.4E-43 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PANTHER PTHR10724 264 626 1.2E-103 T 20-04-2016 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Gene3D G3DSA:2.40.50.140 464 536 2.5E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Gene3D G3DSA:2.40.50.140 541 621 2.8E-29 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Pfam PF02401 LytB protein 3 274 2.0E-85 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Gene3D G3DSA:2.40.50.140 279 368 2.9E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 PANTHER PTHR10724:SF6 264 626 1.2E-103 T 20-04-2016 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SMART SM00316 294 365 1.2E-14 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SMART SM00316 381 449 2.2E-11 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SMART SM00316 549 620 1.1E-27 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SMART SM00316 464 534 1.9E-28 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SUPERFAMILY SSF50249 382 463 7.38E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SUPERFAMILY SSF50249 463 547 6.34E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SUPERFAMILY SSF50249 279 390 1.94E-21 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Gene3D G3DSA:2.40.50.140 384 463 6.3E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 SUPERFAMILY SSF50249 529 630 3.0E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Pfam PF00575 S1 RNA binding domain 380 449 3.8E-12 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Pfam PF00575 S1 RNA binding domain 296 365 4.6E-11 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Pfam PF00575 S1 RNA binding domain 463 534 2.4E-22 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS05205 d0e6a25ea5d8341e1131596f943a0ef5 686 Pfam PF00575 S1 RNA binding domain 548 620 5.0E-22 T 20-04-2016 IPR003029 S1 domain GO:0003676 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 SUPERFAMILY SSF56784 3 212 2.13E-34 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 Gene3D G3DSA:3.40.50.1000 3 212 7.3E-32 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 2.55E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 2.55E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 2.55E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 2.55E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 2.55E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 185 4.3E-24 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 186 5.3E-12 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00520 78d2b8670bda5047952f0d4766227f1d 218 PANTHER PTHR18901 3 218 1.2E-32 T 20-04-2016 APRE_RS05180 e37c9c34e517b80fe5f66e2daaf59f07 142 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 118 141 5.9E-5 T 20-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 APRE_RS05180 e37c9c34e517b80fe5f66e2daaf59f07 142 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 91 117 5.9E-5 T 20-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 APRE_RS05180 e37c9c34e517b80fe5f66e2daaf59f07 142 SUPERFAMILY SSF81333 76 141 1.15E-13 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APRE_RS05180 e37c9c34e517b80fe5f66e2daaf59f07 142 Pfam PF00137 ATP synthase subunit C 80 139 6.8E-14 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APRE_RS05180 e37c9c34e517b80fe5f66e2daaf59f07 142 Hamap MF_01396 ATP synthase subunit c [atpH]. 78 142 9.743 T 20-04-2016 APRE_RS05180 e37c9c34e517b80fe5f66e2daaf59f07 142 Gene3D G3DSA:1.20.120.610 49 140 8.8E-16 T 20-04-2016 APRE_RS06510 4fa87529b7f4834bdf54fb3685171a52 151 Gene3D G3DSA:3.40.140.10 1 139 8.9E-45 T 20-04-2016 APRE_RS06510 4fa87529b7f4834bdf54fb3685171a52 151 SUPERFAMILY SSF53927 1 146 1.42E-43 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APRE_RS06510 4fa87529b7f4834bdf54fb3685171a52 151 PANTHER PTHR11079:SF72 1 146 8.7E-40 T 20-04-2016 APRE_RS06510 4fa87529b7f4834bdf54fb3685171a52 151 Pfam PF14437 MafB19-like deaminase 1 139 1.3E-28 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APRE_RS06510 4fa87529b7f4834bdf54fb3685171a52 151 PANTHER PTHR11079 1 146 8.7E-40 T 20-04-2016 APRE_RS06510 4fa87529b7f4834bdf54fb3685171a52 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 Pfam PF00664 ABC transporter transmembrane region 29 296 9.4E-29 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 SUPERFAMILY SSF90123 15 327 5.49E-56 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 SMART SM00382 369 555 1.7E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 Gene3D G3DSA:3.40.50.300 341 573 6.6E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 Gene3D G3DSA:1.20.1560.10 16 324 6.3E-46 T 20-04-2016 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 PANTHER PTHR24221 1 586 1.6E-158 T 20-04-2016 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 Pfam PF00005 ABC transporter 360 508 3.4E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 SUPERFAMILY SSF52540 336 579 9.58E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07020 cea65bfa93310f6c3a759c677c7397c6 587 PANTHER PTHR24221:SF240 1 586 1.6E-158 T 20-04-2016 APRE_RS02275 f15172abe585a9e12157ee1c7358df6c 446 PANTHER PTHR11206 8 441 9.8E-76 T 20-04-2016 APRE_RS02275 f15172abe585a9e12157ee1c7358df6c 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 418 2.5E-72 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02275 f15172abe585a9e12157ee1c7358df6c 446 PIRSF PIRSF006603 2 446 1.1E-80 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02275 f15172abe585a9e12157ee1c7358df6c 446 PANTHER PTHR11206:SF95 8 441 9.8E-76 T 20-04-2016 APRE_RS02275 f15172abe585a9e12157ee1c7358df6c 446 Pfam PF01554 MatE 16 176 1.2E-30 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02275 f15172abe585a9e12157ee1c7358df6c 446 Pfam PF01554 MatE 246 399 1.6E-22 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 SUPERFAMILY SSF51735 1 338 7.95E-96 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 Gene3D G3DSA:3.40.50.720 1 180 4.9E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 PANTHER PTHR10366:SF39 3 339 2.4E-152 T 20-04-2016 APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 PANTHER PTHR10366 3 339 2.4E-152 T 20-04-2016 APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 7.8E-61 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 2.0E-139 T 20-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 Gene3D G3DSA:3.90.25.10 265 339 2.2E-54 T 20-04-2016 APRE_RS08560 f3e518a13149fa88c2fb5523b11d3074 341 Gene3D G3DSA:3.90.25.10 181 233 2.2E-54 T 20-04-2016 APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 PANTHER PTHR18964 1 253 1.5E-71 T 20-04-2016 APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 PIRSF PIRSF036894 2 311 3.7E-109 T 20-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 Gene3D G3DSA:2.60.120.10 1 214 5.4E-70 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 107 303 3.0E-34 T 20-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 Gene3D G3DSA:2.60.120.10 226 310 1.3E-19 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 PANTHER PTHR18964:SF114 1 253 1.5E-71 T 20-04-2016 APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 SUPERFAMILY SSF51182 2 308 8.9E-86 T 20-04-2016 IPR011051 RmlC-like cupin domain APRE_RS00720 3b7af7b46174ade62db249f9feb53584 318 Pfam PF01238 Phosphomannose isomerase type I 5 206 2.6E-27 T 20-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APRE_RS07370 59522125c9464235d3356a4b36278268 230 SUPERFAMILY SSF46785 11 80 1.46E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07370 59522125c9464235d3356a4b36278268 230 Pfam PF07729 FCD domain 86 207 2.0E-15 T 20-04-2016 IPR011711 GntR, C-terminal APRE_RS07370 59522125c9464235d3356a4b36278268 230 SUPERFAMILY SSF48008 82 211 4.18E-16 T 20-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APRE_RS07370 59522125c9464235d3356a4b36278268 230 SMART SM00895 86 212 2.8E-7 T 20-04-2016 IPR011711 GntR, C-terminal APRE_RS07370 59522125c9464235d3356a4b36278268 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 72 1.5E-14 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS07370 59522125c9464235d3356a4b36278268 230 Gene3D G3DSA:1.10.10.10 4 78 5.2E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07370 59522125c9464235d3356a4b36278268 230 Gene3D G3DSA:1.20.120.530 80 213 2.6E-19 T 20-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APRE_RS07370 59522125c9464235d3356a4b36278268 230 SMART SM00345 18 76 1.0E-9 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS07370 59522125c9464235d3356a4b36278268 230 PANTHER PTHR11751 16 102 4.4E-17 T 20-04-2016 APRE_RS04100 24136ca83971e631ed3f063db1b85496 333 SUPERFAMILY SSF53850 84 303 2.35E-11 T 20-04-2016 APRE_RS04100 24136ca83971e631ed3f063db1b85496 333 Gene3D G3DSA:3.40.190.10 126 257 1.7E-4 T 20-04-2016 APRE_RS07380 3764d66b34cf5bc03c33b84bce328c42 324 SUPERFAMILY SSF53218 169 314 3.27E-35 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07380 3764d66b34cf5bc03c33b84bce328c42 324 Gene3D G3DSA:3.40.980.10 156 309 5.5E-36 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07380 3764d66b34cf5bc03c33b84bce328c42 324 PANTHER PTHR10192 1 320 2.5E-44 T 20-04-2016 APRE_RS07380 3764d66b34cf5bc03c33b84bce328c42 324 Pfam PF00994 Probable molybdopterin binding domain 175 303 5.7E-25 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07380 3764d66b34cf5bc03c33b84bce328c42 324 SMART SM00852 174 306 2.1E-25 T 20-04-2016 IPR001453 MoaB/Mog domain APRE_RS07380 3764d66b34cf5bc03c33b84bce328c42 324 PANTHER PTHR10192:SF13 1 320 2.5E-44 T 20-04-2016 APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 SMART SM00382 32 218 1.9E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 SUPERFAMILY SSF52540 3 223 5.2E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 PANTHER PTHR24220 5 226 1.2E-98 T 20-04-2016 APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 Pfam PF00005 ABC transporter 23 169 2.5E-35 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 Gene3D G3DSA:3.40.50.300 3 223 2.1E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03840 596cb8983e27fca6e211f89003def41d 226 PANTHER PTHR24220:SF86 5 226 1.2E-98 T 20-04-2016 APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 7 237 2.3E-85 T 20-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 PANTHER PTHR21234:SF8 5 237 4.7E-58 T 20-04-2016 APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 Gene3D G3DSA:3.40.50.1580 14 237 2.7E-72 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 SUPERFAMILY SSF53167 5 237 1.31E-78 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 4 239 38.826 T 20-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 PANTHER PTHR21234 5 237 4.7E-58 T 20-04-2016 IPR018017 Nucleoside phosphorylase APRE_RS04960 ca122ab8b96587359eae79d8bab8454d 239 Pfam PF01048 Phosphorylase superfamily 19 235 1.3E-38 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 Gene3D G3DSA:3.40.50.300 1 238 6.9E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 PANTHER PTHR24220 3 241 2.4E-131 T 20-04-2016 APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 Pfam PF00005 ABC transporter 17 165 4.5E-35 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 SMART SM00382 26 213 6.6E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 SUPERFAMILY SSF52540 1 236 4.31E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 PANTHER PTHR24220:SF327 3 241 2.4E-131 T 20-04-2016 APRE_RS02590 0b87d876eba1611738307ce2a5269e4d 241 PIRSF PIRSF039085 1 241 3.5E-109 T 20-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 Gene3D G3DSA:3.50.50.60 403 452 1.2E-26 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 Gene3D G3DSA:3.50.50.60 1 229 1.2E-26 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 PANTHER PTHR10617:SF110 1 323 4.0E-126 T 20-04-2016 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 PANTHER PTHR10617:SF110 401 454 4.0E-126 T 20-04-2016 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 PANTHER PTHR10617 1 323 4.0E-126 T 20-04-2016 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 PANTHER PTHR10617 401 454 4.0E-126 T 20-04-2016 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 SUPERFAMILY SSF51905 143 231 1.4E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 SUPERFAMILY SSF51905 1 113 1.4E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01745 39b4cc7c87d39eae603c301dbd0355bd 457 SUPERFAMILY SSF51905 398 454 1.4E-24 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 Gene3D G3DSA:3.40.50.1000 179 265 1.5E-55 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 Gene3D G3DSA:3.40.50.1000 2 74 1.5E-55 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 233 5.3E-21 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 PANTHER PTHR10000 1 265 2.1E-65 T 20-04-2016 APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 PANTHER PTHR10000:SF16 1 265 2.1E-65 T 20-04-2016 APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 Gene3D G3DSA:3.30.1240.10 86 178 1.2E-22 T 20-04-2016 APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 SUPERFAMILY SSF56784 2 264 2.0E-69 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 260 6.7E-65 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01215 151091580eafa8208b941efa71d6a4fe 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 260 2.1E-58 T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS07095 a6fd7b490aecb926a2666820efaf075d 433 PIRSF PIRSF006066 4 432 1.8E-137 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APRE_RS07095 a6fd7b490aecb926a2666820efaf075d 433 PANTHER PTHR33362 7 427 4.0E-147 T 20-04-2016 APRE_RS07095 a6fd7b490aecb926a2666820efaf075d 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 5.5E-123 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APRE_RS07095 a6fd7b490aecb926a2666820efaf075d 433 PANTHER PTHR33362:SF2 7 427 4.0E-147 T 20-04-2016 APRE_RS07095 a6fd7b490aecb926a2666820efaf075d 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 420 2.9E-105 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APRE_RS05695 65438799c7a711015e57ec914a79acf5 255 Pfam PF08378 Nuclease-related domain 25 141 2.4E-29 T 20-04-2016 IPR011528 Nuclease-related domain, NERD APRE_RS05695 65438799c7a711015e57ec914a79acf5 255 SUPERFAMILY SSF57783 208 249 3.74E-12 T 20-04-2016 APRE_RS05695 65438799c7a711015e57ec914a79acf5 255 Gene3D G3DSA:3.30.65.10 206 247 4.9E-14 T 20-04-2016 APRE_RS05695 65438799c7a711015e57ec914a79acf5 255 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 217 253 4.0E-17 T 20-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 SUPERFAMILY SSF52540 1 200 1.11E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 SUPERFAMILY SSF52540 318 510 1.11E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 PANTHER PTHR11059 2 562 2.2E-127 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 SMART SM00382 22 511 0.0013 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 PIRSF PIRSF003128 1 558 1.1E-146 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 2.0E-134 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 Pfam PF13476 AAA domain 5 200 6.5E-13 T 20-04-2016 APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 Gene3D G3DSA:3.40.50.300 1 203 2.5E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05245 010a50f3e33a05cd2e667bfbd40315d6 562 Gene3D G3DSA:3.40.50.300 369 512 1.7E-8 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01200 d28175680dffedf25b7bafbf90b948c5 181 Pfam PF06962 Putative rRNA methylase 46 178 2.6E-42 T 20-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APRE_RS01200 d28175680dffedf25b7bafbf90b948c5 181 PANTHER PTHR35276 20 179 2.4E-25 T 20-04-2016 APRE_RS01200 d28175680dffedf25b7bafbf90b948c5 181 PANTHER PTHR35276:SF1 20 179 2.4E-25 T 20-04-2016 APRE_RS01200 d28175680dffedf25b7bafbf90b948c5 181 Gene3D G3DSA:3.40.50.150 19 170 1.9E-13 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01200 d28175680dffedf25b7bafbf90b948c5 181 SUPERFAMILY SSF53335 7 155 4.67E-17 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 1.3E-30 T 20-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 SUPERFAMILY SSF52540 140 437 5.14E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 343 7.2E-25 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 160 9.3E-27 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Pfam PF01926 50S ribosome-binding GTPase 177 295 9.6E-25 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Pfam PF01926 50S ribosome-binding GTPase 6 121 5.1E-26 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 SUPERFAMILY SSF52540 6 164 2.77E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 PIRSF PIRSF006485 2 439 9.2E-166 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 PANTHER PTHR11649:SF5 1 428 4.4E-124 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 PANTHER PTHR11649 1 428 4.4E-124 T 20-04-2016 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 433 2.3E-164 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Hamap MF_00195 GTPase Der [der]. 3 436 38.138 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Gene3D G3DSA:3.40.50.300 175 358 9.6E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Gene3D G3DSA:3.40.50.300 3 164 8.1E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04685 5ac7a5102569dd05226e44ba04149434 439 Gene3D G3DSA:3.30.300.20 359 435 4.6E-32 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APRE_RS04545 a09e800cf34e27dce84bd6987cad7a63 457 Gene3D G3DSA:3.40.630.10 373 452 7.6E-4 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 521 4.5E-33 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 Gene3D G3DSA:3.40.50.1000 437 556 6.3E-32 T 20-04-2016 IPR023214 HAD-like domain APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 544 5.1E-22 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 444 5.1E-22 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 179 5.1E-22 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 528 5.1E-22 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 307 321 5.1E-22 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 456 466 5.1E-22 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 309 315 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 SUPERFAMILY SSF56784 305 325 1.54E-37 T 20-04-2016 IPR023214 HAD-like domain APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 SUPERFAMILY SSF56784 365 568 1.54E-37 T 20-04-2016 IPR023214 HAD-like domain APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PANTHER PTHR24093 18 569 2.4E-103 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 509 525 5.1E-5 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 540 565 5.1E-5 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 65 567 3.2E-136 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 SUPERFAMILY SSF81653 121 215 1.1E-21 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 Gene3D G3DSA:2.70.150.10 72 216 4.2E-23 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 PANTHER PTHR24093:SF50 18 569 2.4E-103 T 20-04-2016 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 Pfam PF00122 E1-E2 ATPase 88 298 2.2E-43 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 Gene3D G3DSA:3.40.1110.10 329 436 1.0E-8 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 569 6.5E-63 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APRE_RS09030 6ce9b6aac79b16e106072234431f2ea6 578 Gene3D G3DSA:3.40.1110.10 298 328 1.0E-4 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APRE_RS05135 76453bbf61a607f4175cb07c4c37d5c6 285 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 64 204 3.3E-36 T 20-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APRE_RS05135 76453bbf61a607f4175cb07c4c37d5c6 285 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 64 204 6.4E-42 T 20-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain APRE_RS05135 76453bbf61a607f4175cb07c4c37d5c6 285 PANTHER PTHR33392:SF6 37 280 1.0E-57 T 20-04-2016 APRE_RS05135 76453bbf61a607f4175cb07c4c37d5c6 285 PANTHER PTHR33392 37 280 1.0E-57 T 20-04-2016 APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 Pfam PF04002 RadC-like JAB domain 107 226 4.7E-45 T 20-04-2016 IPR025657 RadC-like JAB domain APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 PANTHER PTHR30471:SF3 2 228 1.6E-92 T 20-04-2016 APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 Gene3D G3DSA:3.40.140.10 105 226 7.2E-47 T 20-04-2016 APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 Gene3D G3DSA:1.10.150.20 19 28 5.5E-4 T 20-04-2016 APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 Gene3D G3DSA:1.10.150.20 61 85 5.5E-4 T 20-04-2016 APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 PANTHER PTHR30471 2 228 1.6E-92 T 20-04-2016 APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 177 182 - T 20-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APRE_RS06690 9ac0bbcef8ba220f8d30c53f4a47c291 228 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 228 3.0E-66 T 20-04-2016 IPR001405 RadC protein APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 Gene3D G3DSA:3.40.50.1390 27 159 1.6E-31 T 20-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 PANTHER PTHR30461 27 496 3.3E-53 T 20-04-2016 APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 Pfam PF13408 Recombinase zinc beta ribbon domain 330 391 4.9E-9 T 20-04-2016 IPR025827 Recombinase zinc beta ribbon domain APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 Pfam PF07508 Recombinase 199 305 9.1E-25 T 20-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 Pfam PF00239 Resolvase, N terminal domain 28 176 6.6E-31 T 20-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 PANTHER PTHR30461:SF3 27 496 3.3E-53 T 20-04-2016 APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 SUPERFAMILY SSF53041 27 176 2.88E-35 T 20-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APRE_RS03605 c43b81658ec562bdd24a0ba0a5ac3d6b 606 SMART SM00857 28 177 1.5E-48 T 20-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APRE_RS02915 47aaf811d10458ce18bbfced96cef2cd 261 PANTHER PTHR31082 17 260 2.5E-47 T 20-04-2016 APRE_RS02915 47aaf811d10458ce18bbfced96cef2cd 261 Pfam PF06738 Putative threonine/serine exporter 18 255 1.8E-63 T 20-04-2016 IPR010619 Putative threonine/serine exporter APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 SUPERFAMILY SSF53807 27 117 3.63E-71 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 SUPERFAMILY SSF53807 254 434 3.63E-71 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PRINTS PR00690 Adhesin family signature 29 47 2.6E-8 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PRINTS PR00690 Adhesin family signature 60 73 2.6E-8 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PRINTS PR00690 Adhesin family signature 73 90 2.6E-8 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PANTHER PTHR30477:SF1 237 432 1.9E-50 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PANTHER PTHR30477:SF1 1 117 1.9E-50 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 Gene3D G3DSA:3.40.50.1980 23 126 1.6E-50 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 Gene3D G3DSA:3.40.50.1980 254 312 1.6E-50 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PRINTS PR00691 Adhesin B signature 29 50 2.4E-8 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PRINTS PR00691 Adhesin B signature 73 92 2.4E-8 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PRINTS PR00691 Adhesin B signature 54 72 2.4E-8 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 429 1.6E-68 T 20-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PANTHER PTHR30477 237 432 1.9E-50 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 PANTHER PTHR30477 1 117 1.9E-50 T 20-04-2016 APRE_RS02645 a3ae931a19929267d94d78e344ccf177 442 Gene3D G3DSA:3.40.50.1980 313 433 5.2E-26 T 20-04-2016 APRE_RS07160 3555e7ee566a58fec271aa3898fbc540 129 Gene3D G3DSA:3.30.230.10 5 129 8.2E-50 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APRE_RS07160 3555e7ee566a58fec271aa3898fbc540 129 PANTHER PTHR21569 5 129 1.5E-64 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APRE_RS07160 3555e7ee566a58fec271aa3898fbc540 129 SUPERFAMILY SSF54211 5 129 1.06E-47 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS07160 3555e7ee566a58fec271aa3898fbc540 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 29.463 T 20-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APRE_RS07160 3555e7ee566a58fec271aa3898fbc540 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 20-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APRE_RS07160 3555e7ee566a58fec271aa3898fbc540 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 1.3E-47 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 189 1.2E-82 T 20-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 PANTHER PTHR10681:SF121 1 189 5.6E-71 T 20-04-2016 APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 Pfam PF00578 AhpC/TSA family 4 134 2.0E-31 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 SUPERFAMILY SSF52833 1 181 1.67E-47 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 Gene3D G3DSA:3.40.30.10 4 178 2.3E-50 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 PANTHER PTHR10681 1 189 5.6E-71 T 20-04-2016 APRE_RS00240 31edafded26dd337f9663856ca0e7733 189 PIRSF PIRSF000239 1 189 7.6E-46 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 236 255 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PRINTS PR00173 Glutamate-aspartate symporter signature 201 220 1.5E-53 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 Gene3D G3DSA:1.10.3860.10 3 415 3.2E-126 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 Pfam PF00375 Sodium:dicarboxylate symporter family 11 409 9.4E-123 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 SUPERFAMILY SSF118215 11 409 2.75E-114 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02695 1ec558f2668c0e4bbe2ac8e5c9c3f170 425 PANTHER PTHR11958 5 421 3.6E-145 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS05355 b1886ca72b038602e3561f2253d6a66b 269 SUPERFAMILY SSF55469 178 213 5.76E-7 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS05355 b1886ca72b038602e3561f2253d6a66b 269 Pfam PF14512 Putative TM nitroreductase 10 236 3.4E-24 T 20-04-2016 IPR029478 Putative nitroreductase TM1586 APRE_RS05355 b1886ca72b038602e3561f2253d6a66b 269 Gene3D G3DSA:3.40.109.30 178 237 3.6E-9 T 20-04-2016 APRE_RS05355 b1886ca72b038602e3561f2253d6a66b 269 Gene3D G3DSA:3.40.109.10 5 175 3.8E-19 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS05355 b1886ca72b038602e3561f2253d6a66b 269 SUPERFAMILY SSF55469 8 177 2.62E-15 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS06700 3e81c38790a89cbfc984901fba9a39ff 130 PANTHER PTHR40451 1 128 4.5E-16 T 20-04-2016 APRE_RS06700 3e81c38790a89cbfc984901fba9a39ff 130 PANTHER PTHR40451:SF1 1 128 4.5E-16 T 20-04-2016 APRE_RS06700 3e81c38790a89cbfc984901fba9a39ff 130 Gene3D G3DSA:2.60.320.10 37 112 1.1E-23 T 20-04-2016 IPR024045 NusG, domain 2 APRE_RS06700 3e81c38790a89cbfc984901fba9a39ff 130 Pfam PF07009 NusG domain II 11 114 1.2E-29 T 20-04-2016 IPR024045 NusG, domain 2 APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 Pfam PF01926 50S ribosome-binding GTPase 122 204 2.8E-15 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 Gene3D G3DSA:3.40.50.300 19 177 2.5E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 276 1.2E-101 T 20-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 SUPERFAMILY SSF52540 9 251 2.97E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 PIRSF PIRSF006230 1 278 1.1E-90 T 20-04-2016 IPR016478 GTPase, MTG1 APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 Gene3D G3DSA:1.10.1580.10 182 270 1.1E-25 T 20-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain APRE_RS06560 60cc748d60e20ecd89db66451460bfaa 278 PANTHER PTHR11089 3 275 5.1E-71 T 20-04-2016 APRE_RS02490 072b3033197cc52b488c8362eaf695b5 318 SUPERFAMILY SSF103481 48 146 2.09E-11 T 20-04-2016 APRE_RS02490 072b3033197cc52b488c8362eaf695b5 318 Pfam PF00892 EamA-like transporter family 16 143 4.7E-17 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APRE_RS02490 072b3033197cc52b488c8362eaf695b5 318 Pfam PF00892 EamA-like transporter family 162 296 1.1E-16 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APRE_RS02490 072b3033197cc52b488c8362eaf695b5 318 PANTHER PTHR12715 12 298 9.6E-48 T 20-04-2016 APRE_RS02490 072b3033197cc52b488c8362eaf695b5 318 SUPERFAMILY SSF103481 226 296 3.01E-7 T 20-04-2016 APRE_RS01335 38b7272188ce821a48d3b0883f3d0555 277 Gene3D G3DSA:1.10.3720.10 8 265 1.1E-50 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01335 38b7272188ce821a48d3b0883f3d0555 277 SUPERFAMILY SSF161098 9 277 2.22E-56 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01335 38b7272188ce821a48d3b0883f3d0555 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 272 4.8E-25 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01335 38b7272188ce821a48d3b0883f3d0555 277 PANTHER PTHR32243:SF24 1 277 7.6E-123 T 20-04-2016 APRE_RS01335 38b7272188ce821a48d3b0883f3d0555 277 PANTHER PTHR32243 1 277 7.6E-123 T 20-04-2016 APRE_RS05400 339545c51553f239807c737b1ed20622 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.4E-26 T 20-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APRE_RS05400 339545c51553f239807c737b1ed20622 116 Pfam PF03960 ArsC family 54 106 2.2E-8 T 20-04-2016 IPR006660 Arsenate reductase-like APRE_RS05400 339545c51553f239807c737b1ed20622 116 SUPERFAMILY SSF52833 5 116 3.84E-28 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS05400 339545c51553f239807c737b1ed20622 116 PANTHER PTHR30041:SF3 1 106 1.4E-26 T 20-04-2016 APRE_RS05400 339545c51553f239807c737b1ed20622 116 PANTHER PTHR30041 1 106 1.4E-26 T 20-04-2016 APRE_RS05400 339545c51553f239807c737b1ed20622 116 Gene3D G3DSA:3.40.30.10 1 112 1.5E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS05400 339545c51553f239807c737b1ed20622 116 Pfam PF00462 Glutaredoxin 7 44 1.0E-5 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 SUPERFAMILY SSF55681 92 340 3.64E-77 T 20-04-2016 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 340 43.063 T 20-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 8.3E-20 T 20-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 Gene3D G3DSA:3.30.930.10 11 340 3.2E-125 T 20-04-2016 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 Pfam PF01409 tRNA synthetases class II core domain (F) 92 340 1.2E-97 T 20-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 PANTHER PTHR11538 91 340 6.3E-96 T 20-04-2016 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 SUPERFAMILY SSF46589 15 96 2.25E-16 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APRE_RS06870 5904631b09086aab93233e93c0cf27c2 340 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 340 1.9E-95 T 20-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APRE_RS00635 bd41e30adb1ee814fc3f212a05a7caa3 155 PANTHER PTHR40028:SF1 1 153 9.1E-38 T 20-04-2016 APRE_RS00635 bd41e30adb1ee814fc3f212a05a7caa3 155 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 4 150 5.5E-44 T 20-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 APRE_RS00635 bd41e30adb1ee814fc3f212a05a7caa3 155 PANTHER PTHR40028 1 153 9.1E-38 T 20-04-2016 APRE_RS04015 92b8582f8dee03b843bbaa971cd9d5c4 617 Gene3D G3DSA:3.40.1140.10 3 95 7.0E-16 T 20-04-2016 APRE_RS04015 92b8582f8dee03b843bbaa971cd9d5c4 617 Gene3D G3DSA:3.40.1140.10 532 596 7.0E-16 T 20-04-2016 APRE_RS04015 92b8582f8dee03b843bbaa971cd9d5c4 617 SUPERFAMILY SSF52540 197 233 6.31E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04015 92b8582f8dee03b843bbaa971cd9d5c4 617 SUPERFAMILY SSF52540 425 595 6.31E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04015 92b8582f8dee03b843bbaa971cd9d5c4 617 SUPERFAMILY SSF52540 5 165 6.31E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04015 92b8582f8dee03b843bbaa971cd9d5c4 617 Pfam PF13514 AAA domain 6 66 1.1E-12 T 20-04-2016 APRE_RS01275 d212d99e1e30250930bfccf90a659200 393 Pfam PF12698 ABC-2 family transporter protein 21 366 9.0E-34 T 20-04-2016 APRE_RS01275 d212d99e1e30250930bfccf90a659200 393 PANTHER PTHR41312 2 391 9.2E-49 T 20-04-2016 APRE_RS01885 ef86714b523cd363180978de166d536a 636 SUPERFAMILY SSF53335 419 520 2.74E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01885 ef86714b523cd363180978de166d536a 636 SUPERFAMILY SSF53335 162 353 2.74E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01885 ef86714b523cd363180978de166d536a 636 Gene3D G3DSA:3.40.50.150 163 317 3.2E-64 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01885 ef86714b523cd363180978de166d536a 636 Gene3D G3DSA:3.40.50.150 421 536 3.2E-64 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS01885 ef86714b523cd363180978de166d536a 636 Pfam PF01555 DNA methylase 195 505 5.9E-40 T 20-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APRE_RS01885 ef86714b523cd363180978de166d536a 636 Pfam PF12564 Type III restriction/modification enzyme methylation subunit 37 92 8.6E-25 T 20-04-2016 IPR022221 Type III restriction/modification enzyme methylation subunit APRE_RS01885 ef86714b523cd363180978de166d536a 636 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 233 253 2.4E-18 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 490 510 2.4E-18 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 467 485 2.4E-18 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 194 208 2.4E-18 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 448 465 2.4E-18 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PANTHER PTHR13370 156 379 2.0E-38 T 20-04-2016 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PANTHER PTHR13370 421 562 2.0E-38 T 20-04-2016 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PANTHER PTHR13370:SF7 156 379 2.0E-38 T 20-04-2016 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PANTHER PTHR13370:SF7 421 562 2.0E-38 T 20-04-2016 APRE_RS01885 ef86714b523cd363180978de166d536a 636 PIRSF PIRSF015855 50 636 2.2E-99 T 20-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 SUPERFAMILY SSF52540 315 536 5.85E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 SUPERFAMILY SSF52540 5 244 1.09E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 Gene3D G3DSA:3.40.50.300 2 90 7.6E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 Gene3D G3DSA:3.40.50.300 125 281 7.6E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 Gene3D G3DSA:3.40.50.300 332 553 7.0E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 Pfam PF00005 ABC transporter 349 478 1.4E-20 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 Pfam PF00005 ABC transporter 20 192 7.4E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 SMART SM00382 28 237 1.0E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 SMART SM00382 357 523 7.6E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 PANTHER PTHR19211 1 577 3.4E-220 T 20-04-2016 APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 Pfam PF12848 ABC transporter 232 322 4.8E-26 T 20-04-2016 IPR032781 ABC-transporter extension domain APRE_RS07530 6cc0b45aa2768553365037c257d756ed 639 PANTHER PTHR19211:SF64 1 577 3.4E-220 T 20-04-2016 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 8.7E-22 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 PANTHER PTHR24220 5 318 1.0E-115 T 20-04-2016 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 PANTHER PTHR24220:SF503 5 318 1.0E-115 T 20-04-2016 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 Gene3D G3DSA:3.40.50.300 2 255 5.3E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 2.7E-26 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 Pfam PF00005 ABC transporter 24 181 7.0E-24 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 SUPERFAMILY SSF52540 3 253 1.05E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02100 2323fd7ef329cbe35f262eb3a5f8d3f6 323 SMART SM00382 32 231 1.3E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08895 d42a259f71c1b674a7140d34f2e10205 87 SUPERFAMILY SSF55979 3 65 2.9E-6 T 20-04-2016 APRE_RS08895 d42a259f71c1b674a7140d34f2e10205 87 Pfam PF02767 DNA polymerase III beta subunit, central domain 11 61 1.6E-5 T 20-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APRE_RS08895 d42a259f71c1b674a7140d34f2e10205 87 Gene3D G3DSA:3.10.150.10 9 68 1.0E-9 T 20-04-2016 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 8.6E-38 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 20-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 SUPERFAMILY SSF52922 531 659 4.32E-39 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 PANTHER PTHR11624:SF1 2 315 0.0 T 20-04-2016 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 PANTHER PTHR11624:SF1 346 658 0.0 T 20-04-2016 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 Pfam PF02780 Transketolase, C-terminal domain 543 591 4.8E-8 T 20-04-2016 IPR033248 Transketolase, C-terminal domain APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 337 3.0E-144 T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 Gene3D G3DSA:3.40.50.970 5 323 1.8E-121 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 PANTHER PTHR11624 2 315 0.0 T 20-04-2016 IPR033247 Transketolase family APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 PANTHER PTHR11624 346 658 0.0 T 20-04-2016 IPR033247 Transketolase family APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 657 1.5E-277 T 20-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 Gene3D G3DSA:3.40.50.920 537 658 1.8E-39 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 SUPERFAMILY SSF52518 350 526 5.61E-59 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 Gene3D G3DSA:3.40.50.970 334 530 4.4E-67 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 SMART SM00861 354 525 1.1E-54 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APRE_RS08275 f5cc1250510322b22e45d0246ff10c0a 662 SUPERFAMILY SSF52518 7 323 1.18E-114 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 Gene3D G3DSA:3.40.190.10 436 487 6.2E-21 T 20-04-2016 APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 Gene3D G3DSA:3.40.190.10 165 358 6.2E-21 T 20-04-2016 APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 PANTHER PTHR30061 1 360 1.3E-17 T 20-04-2016 APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 SUPERFAMILY SSF53850 38 487 1.18E-62 T 20-04-2016 APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 Pfam PF12010 Domain of unknown function (DUF3502) 359 488 1.3E-29 T 20-04-2016 IPR022627 Domain of unknown function DUF3502 APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 Gene3D G3DSA:3.40.190.10 5 155 2.0E-10 T 20-04-2016 APRE_RS00750 baeb82345f8677e4eaa751930c3514ec 490 Pfam PF13416 Bacterial extracellular solute-binding protein 60 350 3.6E-18 T 20-04-2016 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 SUPERFAMILY SSF46600 192 244 1.03E-8 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Pfam PF12826 Helix-hairpin-helix motif 565 613 1.5E-11 T 20-04-2016 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 SMART SM00278 560 579 0.38 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 SMART SM00278 592 611 90.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.0E-12 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 PANTHER PTHR30562 2 612 2.4E-221 T 20-04-2016 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 SUPERFAMILY SSF47781 535 613 2.86E-19 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 390 546 1.7E-45 T 20-04-2016 IPR001162 UvrC family homology region APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Gene3D G3DSA:4.10.860.10 185 244 3.5E-10 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 SUPERFAMILY SSF82771 16 100 4.45E-24 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Pfam PF02151 UvrB/uvrC motif 213 237 3.0E-5 T 20-04-2016 IPR001943 UVR domain GO:0005515 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 593 1.2E-171 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 PANTHER PTHR30562:SF1 2 612 2.4E-221 T 20-04-2016 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Gene3D G3DSA:1.10.150.20 561 613 2.6E-20 T 20-04-2016 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 611 26.982 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 Gene3D G3DSA:3.40.1440.10 17 95 1.5E-11 T 20-04-2016 IPR027299 GIY-YIG domain APRE_RS05330 4a7c1a0cf229c14b852b5238fd480977 616 SMART SM00465 16 98 4.9E-24 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 PANTHER PTHR11138 2 300 9.4E-89 T 20-04-2016 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 SUPERFAMILY SSF50486 205 304 4.24E-25 T 20-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 Pfam PF00551 Formyl transferase 7 177 2.4E-36 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 Gene3D G3DSA:3.10.25.10 207 309 1.7E-27 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 Pfam PF02911 Formyl transferase, C-terminal domain 204 301 9.9E-25 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 301 2.8E-78 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 Gene3D G3DSA:3.40.50.170 2 206 1.0E-58 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 SUPERFAMILY SSF53328 2 207 1.96E-56 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS03460 4395b50f40f21999fe704bc31a6d77e8 312 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 304 28.611 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APRE_RS06480 f414f1b041c22213f69f9551c68d26b2 389 PANTHER PTHR30040 76 389 9.0E-70 T 20-04-2016 APRE_RS06480 f414f1b041c22213f69f9551c68d26b2 389 PIRSF PIRSF006268 54 388 1.5E-75 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APRE_RS06480 f414f1b041c22213f69f9551c68d26b2 389 Pfam PF02424 ApbE family 79 370 9.2E-63 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APRE_RS06480 f414f1b041c22213f69f9551c68d26b2 389 SUPERFAMILY SSF143631 75 385 1.86E-72 T 20-04-2016 IPR003374 ApbE-like domain APRE_RS06480 f414f1b041c22213f69f9551c68d26b2 389 PANTHER PTHR30040:SF2 76 389 9.0E-70 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APRE_RS06280 cf6e3ed68af15fc11715be0ab1573067 309 Pfam PF06166 Protein of unknown function (DUF979) 12 309 3.9E-111 T 20-04-2016 IPR009323 Protein of unknown function DUF979 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 PIRSF PIRSF004640 1 355 1.9E-140 T 20-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 345 6.3E-122 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 Pfam PF04551 GcpE protein 5 346 5.2E-132 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 SUPERFAMILY SSF51717 13 201 2.04E-8 T 20-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 Gene3D G3DSA:3.20.20.70 18 125 7.1E-8 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 350 32.429 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 PANTHER PTHR30454 1 354 1.0E-168 T 20-04-2016 APRE_RS03135 d785f8d454327dc11d9a65da38d487b9 356 SUPERFAMILY SSF56014 259 346 2.57E-8 T 20-04-2016 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 SUPERFAMILY SSF82866 142 327 2.88E-28 T 20-04-2016 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 SUPERFAMILY SSF82866 480 671 7.72E-25 T 20-04-2016 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 PANTHER PTHR33406 4 671 4.0E-44 T 20-04-2016 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 Gene3D G3DSA:1.20.1640.10 171 332 2.0E-22 T 20-04-2016 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 Gene3D G3DSA:1.20.1640.10 480 679 6.6E-22 T 20-04-2016 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 Pfam PF03176 MMPL family 42 323 1.1E-27 T 20-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APRE_RS02885 3435aad097fba0af3926d61ef51cb342 684 Pfam PF03176 MMPL family 467 672 7.9E-27 T 20-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 PIRSF PIRSF005052 1 282 2.9E-91 T 20-04-2016 IPR005337 RapZ-like family GO:0005524 APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 PANTHER PTHR30448:SF0 1 281 2.6E-101 T 20-04-2016 APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 Gene3D G3DSA:3.40.50.300 5 152 1.5E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 35.393 T 20-04-2016 IPR005337 RapZ-like family GO:0005524 APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 Pfam PF03668 P-loop ATPase protein family 3 280 1.3E-77 T 20-04-2016 IPR005337 RapZ-like family GO:0005524 APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 PANTHER PTHR30448 1 281 2.6E-101 T 20-04-2016 APRE_RS03505 dcc413e8040d1d208cc526e021c17cdd 282 SUPERFAMILY SSF52540 5 151 7.43E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 SUPERFAMILY SSF102114 134 361 1.1E-55 T 20-04-2016 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 PANTHER PTHR11918 7 430 1.8E-122 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 SMART SM00729 142 360 1.7E-53 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 408 5.5E-139 T 20-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 Pfam PF00919 Uncharacterized protein family UPF0004 5 97 8.8E-25 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 428 3.1E-133 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 PANTHER PTHR11918:SF45 7 430 1.8E-122 T 20-04-2016 APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 Gene3D G3DSA:3.80.30.20 141 362 4.1E-73 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS05930 d1c54192b530709b8cafce59bd67cb69 431 Pfam PF04055 Radical SAM superfamily 147 318 3.6E-28 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS03125 c6ed3b72e5bec32787803eee7331f926 258 PANTHER PTHR13773 2 255 2.8E-48 T 20-04-2016 APRE_RS03125 c6ed3b72e5bec32787803eee7331f926 258 PANTHER PTHR13773:SF0 2 255 2.8E-48 T 20-04-2016 APRE_RS03125 c6ed3b72e5bec32787803eee7331f926 258 Pfam PF01148 Cytidylyltransferase family 6 256 2.5E-50 T 20-04-2016 APRE_RS03125 c6ed3b72e5bec32787803eee7331f926 258 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 217 243 - T 20-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 APRE_RS04200 d1d258fbaa6dabe3561c6a6c870c4dc2 125 Gene3D G3DSA:3.30.1330.70 1 124 7.6E-19 T 20-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APRE_RS04200 d1d258fbaa6dabe3561c6a6c870c4dc2 125 Pfam PF05866 Endodeoxyribonuclease RusA 29 121 1.0E-9 T 20-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APRE_RS04200 d1d258fbaa6dabe3561c6a6c870c4dc2 125 SUPERFAMILY SSF103084 22 123 2.62E-12 T 20-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APRE_RS01360 501f6861c5cae76147275b71df402157 380 PANTHER PTHR10859 25 336 1.9E-26 T 20-04-2016 APRE_RS01360 501f6861c5cae76147275b71df402157 380 Pfam PF00535 Glycosyl transferase family 2 45 174 2.6E-24 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APRE_RS01360 501f6861c5cae76147275b71df402157 380 Gene3D G3DSA:3.90.550.10 42 271 2.9E-32 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS01360 501f6861c5cae76147275b71df402157 380 SUPERFAMILY SSF53448 38 305 7.41E-41 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS01360 501f6861c5cae76147275b71df402157 380 PANTHER PTHR10859:SF50 25 336 1.9E-26 T 20-04-2016 APRE_RS08570 330ad8ed0ed04ca0cd06f025393d3aa2 1970 Gene3D G3DSA:1.10.8.40 1753 1803 2.0E-13 T 20-04-2016 APRE_RS08570 330ad8ed0ed04ca0cd06f025393d3aa2 1970 Pfam PF12905 Endo-alpha-N-acetylgalactosaminidase 637 1074 4.0E-173 T 20-04-2016 IPR025706 Endo-alpha-N-acetylgalactosaminidase GO:0033926 APRE_RS08570 330ad8ed0ed04ca0cd06f025393d3aa2 1970 SUPERFAMILY SSF49785 1558 1684 1.86E-11 T 20-04-2016 IPR008979 Galactose-binding domain-like APRE_RS08570 330ad8ed0ed04ca0cd06f025393d3aa2 1970 Gene3D G3DSA:2.60.120.260 1564 1684 9.3E-14 T 20-04-2016 IPR008979 Galactose-binding domain-like APRE_RS08570 330ad8ed0ed04ca0cd06f025393d3aa2 1970 SUPERFAMILY SSF46997 1756 1803 6.28E-7 T 20-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 APRE_RS04280 627ad284e25fc74aeb28ec7e1acdaae0 155 Gene3D G3DSA:1.10.10.700 5 91 8.2E-16 T 20-04-2016 APRE_RS04280 627ad284e25fc74aeb28ec7e1acdaae0 155 SUPERFAMILY SSF46689 20 81 1.16E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS08260 ab53529c01ca3dda6c65387c140afee8 335 PANTHER PTHR33376 1 334 1.8E-68 T 20-04-2016 APRE_RS08260 ab53529c01ca3dda6c65387c140afee8 335 PANTHER PTHR33376:SF4 1 334 1.8E-68 T 20-04-2016 APRE_RS08260 ab53529c01ca3dda6c65387c140afee8 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 319 2.3E-69 T 20-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APRE_RS08260 ab53529c01ca3dda6c65387c140afee8 335 PIRSF PIRSF006470 3 335 1.3E-67 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APRE_RS02035 26d5d9c760523969a08f236089cf6a5d 195 SUPERFAMILY SSF52540 19 189 8.72E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02035 26d5d9c760523969a08f236089cf6a5d 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 15 189 9.3E-69 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APRE_RS02035 26d5d9c760523969a08f236089cf6a5d 195 PANTHER PTHR11649 1 195 3.0E-46 T 20-04-2016 APRE_RS02035 26d5d9c760523969a08f236089cf6a5d 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.648 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APRE_RS02035 26d5d9c760523969a08f236089cf6a5d 195 Gene3D G3DSA:3.40.50.300 5 189 2.3E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02035 26d5d9c760523969a08f236089cf6a5d 195 Pfam PF01926 50S ribosome-binding GTPase 26 136 3.3E-22 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APRE_RS08385 0c2005011279d6efe0bd2332cc4e4507 350 PANTHER PTHR30508 84 341 1.4E-42 T 20-04-2016 APRE_RS08385 0c2005011279d6efe0bd2332cc4e4507 350 Pfam PF01458 Uncharacterized protein family (UPF0051) 100 319 2.2E-44 T 20-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APRE_RS08385 0c2005011279d6efe0bd2332cc4e4507 350 PANTHER PTHR30508:SF0 84 341 1.4E-42 T 20-04-2016 APRE_RS08385 0c2005011279d6efe0bd2332cc4e4507 350 SUPERFAMILY SSF101960 4 341 1.15E-53 T 20-04-2016 APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 PANTHER PTHR24220:SF85 6 243 2.8E-107 T 20-04-2016 APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 PANTHER PTHR24220 6 243 2.8E-107 T 20-04-2016 APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 Pfam PF00005 ABC transporter 20 171 3.4E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 SUPERFAMILY SSF52540 4 228 7.99E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 Gene3D G3DSA:3.40.50.300 2 229 2.3E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 243 6.9E-99 T 20-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APRE_RS08395 a3ed038e97a3ed3611d411004e97edc1 243 SMART SM00382 29 222 7.1E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 SUPERFAMILY SSF74731 3 115 5.76E-48 T 20-04-2016 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 112 1.8E-49 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 PANTHER PTHR10986:SF12 2 115 1.3E-60 T 20-04-2016 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.587 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 Gene3D G3DSA:1.10.1900.20 55 115 3.2E-30 T 20-04-2016 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.3E-40 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.3E-40 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.3E-40 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 PANTHER PTHR10986 2 115 1.3E-60 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 Pfam PF00453 Ribosomal protein L20 3 109 3.1E-48 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APRE_RS06880 27f8f562fd22fff6529f7ed15b7e4599 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-17 T 20-04-2016 APRE_RS05745 ccecc422694ff7152bfde6ffa5af3554 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 4.8E-58 T 20-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APRE_RS05745 ccecc422694ff7152bfde6ffa5af3554 209 SUPERFAMILY SSF52540 1 207 2.13E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05745 ccecc422694ff7152bfde6ffa5af3554 209 Pfam PF02223 Thymidylate kinase 8 196 6.3E-49 T 20-04-2016 APRE_RS05745 ccecc422694ff7152bfde6ffa5af3554 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 28.485 T 20-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APRE_RS05745 ccecc422694ff7152bfde6ffa5af3554 209 Gene3D G3DSA:3.40.50.300 3 206 1.7E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05745 ccecc422694ff7152bfde6ffa5af3554 209 PANTHER PTHR10344 1 208 2.2E-60 T 20-04-2016 APRE_RS03570 86974f87283eb93443b7b462a8fad0df 310 Gene3D G3DSA:1.10.3720.10 92 304 4.1E-14 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS03570 86974f87283eb93443b7b462a8fad0df 310 SUPERFAMILY SSF161098 93 292 1.96E-12 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS03570 86974f87283eb93443b7b462a8fad0df 310 PANTHER PTHR30465:SF24 5 307 1.2E-71 T 20-04-2016 APRE_RS03570 86974f87283eb93443b7b462a8fad0df 310 PANTHER PTHR30465 5 307 1.2E-71 T 20-04-2016 APRE_RS03570 86974f87283eb93443b7b462a8fad0df 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 306 5.2E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 PANTHER PTHR24220:SF160 3 240 6.6E-87 T 20-04-2016 APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 Gene3D G3DSA:3.40.50.300 1 224 3.3E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 SMART SM00382 27 209 1.5E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 Pfam PF00005 ABC transporter 19 161 4.9E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 PANTHER PTHR24220 3 240 6.6E-87 T 20-04-2016 APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 SUPERFAMILY SSF52540 2 223 3.88E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02185 0330c138d5710d071e8df48529f66b32 240 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS00765 5a52d397a8e9430b6b9a9ee4c01dc6d5 426 Pfam PF06824 Protein of unknown function (DUF1237) 20 415 1.5E-133 T 20-04-2016 IPR008313 Meiotically up-regulated gene 157 protein APRE_RS00765 5a52d397a8e9430b6b9a9ee4c01dc6d5 426 Gene3D G3DSA:1.50.10.10 3 421 8.6E-149 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APRE_RS00765 5a52d397a8e9430b6b9a9ee4c01dc6d5 426 SMART SM01149 19 416 2.1E-231 T 20-04-2016 IPR008313 Meiotically up-regulated gene 157 protein APRE_RS00765 5a52d397a8e9430b6b9a9ee4c01dc6d5 426 PIRSF PIRSF028846 1 426 8.7E-160 T 20-04-2016 IPR008313 Meiotically up-regulated gene 157 protein APRE_RS00765 5a52d397a8e9430b6b9a9ee4c01dc6d5 426 PANTHER PTHR31047 3 421 2.1E-151 T 20-04-2016 APRE_RS00765 5a52d397a8e9430b6b9a9ee4c01dc6d5 426 SUPERFAMILY SSF48208 4 421 6.8E-148 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 PANTHER PTHR30349:SF5 8 42 1.9E-60 T 20-04-2016 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 PANTHER PTHR30349:SF5 69 321 1.9E-60 T 20-04-2016 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 Gene3D G3DSA:1.10.150.130 10 125 1.8E-18 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 SUPERFAMILY SSF56349 69 320 1.65E-47 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 SUPERFAMILY SSF56349 11 42 1.65E-47 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 11 114 4.8E-7 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 Pfam PF00589 Phage integrase family 140 312 3.0E-34 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 Gene3D G3DSA:1.10.443.10 140 319 9.2E-44 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 PANTHER PTHR30349 8 42 1.9E-60 T 20-04-2016 APRE_RS04865 804ad6f6fc5d8742a66abd416136979e 329 PANTHER PTHR30349 69 321 1.9E-60 T 20-04-2016 APRE_RS00685 fc1b34094854d55b6c40995336e57ec8 149 SUPERFAMILY SSF46767 68 148 4.97E-28 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APRE_RS00685 fc1b34094854d55b6c40995336e57ec8 149 PANTHER PTHR10815 33 148 3.3E-38 T 20-04-2016 APRE_RS00685 fc1b34094854d55b6c40995336e57ec8 149 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 69 148 1.1E-31 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APRE_RS00685 fc1b34094854d55b6c40995336e57ec8 149 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 148 6.4E-28 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APRE_RS00685 fc1b34094854d55b6c40995336e57ec8 149 PANTHER PTHR10815:SF5 33 148 3.3E-38 T 20-04-2016 APRE_RS00685 fc1b34094854d55b6c40995336e57ec8 149 Gene3D G3DSA:1.10.10.10 68 149 1.2E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06905 5ad18195aacb11579e5575ac97f40cdc 250 Gene3D G3DSA:3.60.15.10 3 60 3.7E-6 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS06905 5ad18195aacb11579e5575ac97f40cdc 250 Gene3D G3DSA:3.60.15.10 104 198 3.7E-6 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 PANTHER PTHR33705 1 83 1.1E-29 T 20-04-2016 APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.7E-27 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 PRINTS PR00107 Phosphocarrier protein signature 53 70 8.6E-18 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 PRINTS PR00107 Phosphocarrier protein signature 13 29 8.6E-18 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 PRINTS PR00107 Phosphocarrier protein signature 38 53 8.6E-18 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 20-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.4E-27 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 SUPERFAMILY SSF55594 3 83 1.44E-25 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS04515 09b7b03f035566b46d68a98fb1373009 86 Gene3D G3DSA:3.30.1340.10 1 83 2.9E-30 T 20-04-2016 IPR000032 Phosphocarrier HPr protein-like APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 PANTHER PTHR11908:SF66 27 174 3.4E-32 T 20-04-2016 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 Gene3D G3DSA:3.10.20.30 27 100 1.5E-25 T 20-04-2016 IPR012675 Beta-grasp domain APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 SUPERFAMILY SSF54292 29 103 1.7E-19 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 Gene3D G3DSA:1.10.150.120 101 179 2.3E-28 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 SUPERFAMILY SSF47741 111 177 7.33E-26 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 32 84 5.9E-5 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 Pfam PF01799 [2Fe-2S] binding domain 99 172 1.5E-24 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 65 73 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APRE_RS07305 ed21cc523c609b844e6af49757e4cdb2 206 PANTHER PTHR11908 27 174 3.4E-32 T 20-04-2016 APRE_RS07825 e95aa3148c2f41a5b903f8b3a6295e34 269 Gene3D G3DSA:3.40.50.300 21 251 5.2E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07825 e95aa3148c2f41a5b903f8b3a6295e34 269 Hamap MF_02040 Iron-sulfur cluster carrier protein. 23 267 32.661 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APRE_RS07825 e95aa3148c2f41a5b903f8b3a6295e34 269 SUPERFAMILY SSF52540 23 249 1.78E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07825 e95aa3148c2f41a5b903f8b3a6295e34 269 PANTHER PTHR23264 26 269 4.3E-90 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APRE_RS07825 e95aa3148c2f41a5b903f8b3a6295e34 269 PANTHER PTHR23264:SF19 26 269 4.3E-90 T 20-04-2016 APRE_RS07825 e95aa3148c2f41a5b903f8b3a6295e34 269 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 28 251 7.5E-84 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APRE_RS02415 01a0837613811bf523f8b5181a0213ba 211 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 50 4.8E-9 T 20-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APRE_RS02415 01a0837613811bf523f8b5181a0213ba 211 Gene3D G3DSA:1.10.10.10 14 50 1.7E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02415 01a0837613811bf523f8b5181a0213ba 211 SUPERFAMILY SSF46689 2 53 5.73E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 PANTHER PTHR24220 5 332 2.0E-148 T 20-04-2016 APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 Pfam PF00005 ABC transporter 24 181 6.4E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 Gene3D G3DSA:3.40.50.300 2 257 6.6E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 PANTHER PTHR24220:SF535 5 332 2.0E-148 T 20-04-2016 APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 SUPERFAMILY SSF52540 3 249 5.22E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 322 4.9E-25 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 302 6.3E-15 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APRE_RS00090 2e6500fc455fe6a249bf685f480f66d4 332 SMART SM00382 32 238 1.5E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS08620 afe029e0e129dfd09065f1fc86912caa 212 PANTHER PTHR11671:SF2 1 212 3.0E-80 T 20-04-2016 APRE_RS08620 afe029e0e129dfd09065f1fc86912caa 212 Pfam PF01813 ATP synthase subunit D 12 205 1.2E-54 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS08620 afe029e0e129dfd09065f1fc86912caa 212 PANTHER PTHR11671 1 212 3.0E-80 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS08620 afe029e0e129dfd09065f1fc86912caa 212 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 3 211 22.18 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS08620 afe029e0e129dfd09065f1fc86912caa 212 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 208 1.5E-49 T 20-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 APRE_RS07405 b2644f52b465c6e4aaebfd9897b05500 222 Gene3D G3DSA:1.10.3720.10 6 218 8.0E-37 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07405 b2644f52b465c6e4aaebfd9897b05500 222 SUPERFAMILY SSF161098 5 212 1.7E-42 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07405 b2644f52b465c6e4aaebfd9897b05500 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 22 206 2.9E-18 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07405 b2644f52b465c6e4aaebfd9897b05500 222 PANTHER PTHR30183 6 212 6.0E-50 T 20-04-2016 APRE_RS07405 b2644f52b465c6e4aaebfd9897b05500 222 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 9 214 6.0E-61 T 20-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 APRE_RS03400 465515ce1498f42aaa60749b9ac34cc8 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 2.2E-7 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03400 465515ce1498f42aaa60749b9ac34cc8 149 SUPERFAMILY SSF54523 6 80 5.49E-8 T 20-04-2016 APRE_RS03400 465515ce1498f42aaa60749b9ac34cc8 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS03400 465515ce1498f42aaa60749b9ac34cc8 149 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 24 4.1E-7 T 20-04-2016 IPR012902 Prokaryotic N-terminal methylation site APRE_RS00595 3fc04df2fe7ed65d7d0257ace37f4a23 310 PANTHER PTHR10361 1 307 4.7E-94 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APRE_RS00595 3fc04df2fe7ed65d7d0257ace37f4a23 310 Pfam PF01758 Sodium Bile acid symporter family 41 217 1.5E-45 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APRE_RS05170 921104374476976a390e03fbb589412d 201 SUPERFAMILY SSF160527 86 191 4.32E-13 T 20-04-2016 APRE_RS05170 921104374476976a390e03fbb589412d 201 Pfam PF01991 ATP synthase (E/31 kDa) subunit 17 142 2.6E-7 T 20-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 APRE_RS01980 01ab04c0489e6bc085dbdea5f0f75039 378 Gene3D G3DSA:3.40.640.10 18 250 2.0E-54 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS01980 01ab04c0489e6bc085dbdea5f0f75039 378 PANTHER PTHR11601 2 373 1.5E-79 T 20-04-2016 APRE_RS01980 01ab04c0489e6bc085dbdea5f0f75039 378 Pfam PF00266 Aminotransferase class-V 1 365 3.6E-72 T 20-04-2016 IPR000192 Aminotransferase class V domain APRE_RS01980 01ab04c0489e6bc085dbdea5f0f75039 378 SUPERFAMILY SSF53383 1 373 5.19E-82 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS01980 01ab04c0489e6bc085dbdea5f0f75039 378 Gene3D G3DSA:3.90.1150.10 251 372 1.6E-20 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APRE_RS00785 21eb1164fb4aaeb35e137fd56138c542 287 PANTHER PTHR18964 1 287 2.1E-72 T 20-04-2016 APRE_RS00785 21eb1164fb4aaeb35e137fd56138c542 287 Gene3D G3DSA:3.30.420.40 1 102 5.9E-35 T 20-04-2016 APRE_RS00785 21eb1164fb4aaeb35e137fd56138c542 287 SUPERFAMILY SSF53067 2 285 1.46E-43 T 20-04-2016 APRE_RS00785 21eb1164fb4aaeb35e137fd56138c542 287 Gene3D G3DSA:3.30.420.40 103 286 1.9E-57 T 20-04-2016 APRE_RS00785 21eb1164fb4aaeb35e137fd56138c542 287 Pfam PF00480 ROK family 2 282 3.3E-64 T 20-04-2016 IPR000600 ROK family APRE_RS00785 21eb1164fb4aaeb35e137fd56138c542 287 PANTHER PTHR18964:SF10 1 287 2.1E-72 T 20-04-2016 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 Pfam PF00230 Major intrinsic protein 5 234 2.3E-42 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 234 5.5E-57 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PRINTS PR00783 Major intrinsic protein family signature 217 237 1.8E-43 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PRINTS PR00783 Major intrinsic protein family signature 138 156 1.8E-43 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PRINTS PR00783 Major intrinsic protein family signature 170 192 1.8E-43 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PRINTS PR00783 Major intrinsic protein family signature 45 69 1.8E-43 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PRINTS PR00783 Major intrinsic protein family signature 82 101 1.8E-43 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PRINTS PR00783 Major intrinsic protein family signature 3 22 1.8E-43 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 SUPERFAMILY SSF81338 5 238 1.19E-65 T 20-04-2016 IPR023271 Aquaporin-like APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PANTHER PTHR19139 5 238 1.9E-82 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 PANTHER PTHR19139:SF147 5 238 1.9E-82 T 20-04-2016 APRE_RS01610 e9f9819a64e21dfb0e6878b85b90b4c9 239 Gene3D G3DSA:1.20.1080.10 5 238 5.1E-78 T 20-04-2016 IPR023271 Aquaporin-like APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SMART SM00974 25 109 4.9E-7 T 20-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 Gene3D G3DSA:3.40.50.300 106 305 3.1E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SUPERFAMILY SSF52540 88 227 8.16E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SUPERFAMILY SSF52540 257 307 8.16E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 Pfam PF04851 Type III restriction enzyme, res subunit 127 303 8.3E-10 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SMART SM00487 123 334 0.0075 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SUPERFAMILY SSF53335 930 1095 6.09E-8 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SUPERFAMILY SSF52540 265 335 1.84E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02715 08fb915a76dd3c29eff78f8120873205 1108 SUPERFAMILY SSF52540 406 525 1.84E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 SMART SM00347 25 125 1.1E-23 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 SUPERFAMILY SSF46785 16 139 1.22E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 Gene3D G3DSA:1.10.10.10 12 140 2.9E-35 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.1E-11 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 3.1E-11 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.1E-11 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 Pfam PF01047 MarR family 33 89 2.5E-12 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 PANTHER PTHR33164 17 139 1.7E-27 T 20-04-2016 APRE_RS08595 889b6b4cdaeb1e875a748d544f3e7e3b 141 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 20-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 PANTHER PTHR12149 12 283 6.4E-63 T 20-04-2016 APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 Gene3D G3DSA:3.30.200.20 24 80 7.5E-4 T 20-04-2016 APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 Pfam PF03881 Fructosamine kinase 12 279 9.7E-60 T 20-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 SUPERFAMILY SSF56112 8 274 1.14E-40 T 20-04-2016 IPR011009 Protein kinase-like domain APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 PANTHER PTHR12149:SF8 12 283 6.4E-63 T 20-04-2016 APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 Gene3D G3DSA:3.90.1200.10 93 253 1.2E-10 T 20-04-2016 APRE_RS06220 0c6c40094bf1a9a83af29d3fe1098b14 284 PIRSF PIRSF006221 4 282 2.2E-66 T 20-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase APRE_RS02625 81114f1f36a88afc059f33c674f8d3be 123 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 3.1E-49 T 20-04-2016 IPR006056 RidA family APRE_RS02625 81114f1f36a88afc059f33c674f8d3be 123 Gene3D G3DSA:3.30.1330.40 2 121 2.7E-43 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APRE_RS02625 81114f1f36a88afc059f33c674f8d3be 123 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 20-04-2016 IPR019897 RidA, conserved site APRE_RS02625 81114f1f36a88afc059f33c674f8d3be 123 PANTHER PTHR11803 1 121 4.0E-50 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family APRE_RS02625 81114f1f36a88afc059f33c674f8d3be 123 Pfam PF01042 Endoribonuclease L-PSP 7 122 1.2E-39 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family APRE_RS02625 81114f1f36a88afc059f33c674f8d3be 123 SUPERFAMILY SSF55298 2 123 5.18E-40 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APRE_RS05060 a9c2425dc6cc35beb78f733b915dbba6 295 Pfam PF13529 Peptidase_C39 like family 142 270 2.8E-19 T 20-04-2016 APRE_RS06240 9047e99e9199e7f4d457314632a76571 269 SUPERFAMILY SSF161098 5 254 4.19E-44 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06240 9047e99e9199e7f4d457314632a76571 269 Gene3D G3DSA:1.10.3720.10 7 258 1.3E-46 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06240 9047e99e9199e7f4d457314632a76571 269 PANTHER PTHR30222 6 269 2.4E-61 T 20-04-2016 APRE_RS06240 9047e99e9199e7f4d457314632a76571 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 254 2.0E-15 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06240 9047e99e9199e7f4d457314632a76571 269 PANTHER PTHR30222:SF1 6 269 2.4E-61 T 20-04-2016 APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 Gene3D G3DSA:3.30.565.10 151 299 1.5E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 260 278 2.6E-6 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 240 2.6E-6 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 297 2.6E-6 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 PANTHER PTHR24423:SF557 43 297 4.6E-61 T 20-04-2016 APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 PANTHER PTHR24423 43 297 4.6E-61 T 20-04-2016 APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 SMART SM00387 192 300 5.0E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 SUPERFAMILY SSF55874 141 298 1.69E-28 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS05570 e500f998ec0cd497273eb3b5909015b2 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 193 297 3.6E-17 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS01250 2731beb66987280332d736eb221257fe 129 Gene3D G3DSA:1.10.260.40 1 65 1.8E-18 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS01250 2731beb66987280332d736eb221257fe 129 Pfam PF01381 Helix-turn-helix 7 62 1.8E-11 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS01250 2731beb66987280332d736eb221257fe 129 SMART SM00530 6 62 8.2E-12 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS01250 2731beb66987280332d736eb221257fe 129 SUPERFAMILY SSF47413 1 68 3.1E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS00755 e1bf44e9ac8e8dea51e3f381eba533de 431 PANTHER PTHR13170 5 260 5.5E-33 T 20-04-2016 APRE_RS00755 e1bf44e9ac8e8dea51e3f381eba533de 431 SUPERFAMILY SSF51445 4 301 3.16E-76 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS00755 e1bf44e9ac8e8dea51e3f381eba533de 431 Pfam PF07555 beta-N-acetylglucosaminidase 5 297 6.3E-89 T 20-04-2016 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 APRE_RS00755 e1bf44e9ac8e8dea51e3f381eba533de 431 PANTHER PTHR13170:SF20 5 260 5.5E-33 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 4.1E-128 T 20-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 369 3.7E-7 T 20-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 PANTHER PTHR11669 1 370 6.8E-133 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 PANTHER PTHR11669 427 504 6.8E-133 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 SUPERFAMILY SSF52540 31 221 1.57E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 Gene3D G3DSA:3.40.50.300 3 164 2.4E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 PANTHER PTHR11669:SF0 1 370 6.8E-133 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 PANTHER PTHR11669:SF0 427 504 6.8E-133 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 SMART SM00382 36 178 5.1E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 SUPERFAMILY SSF48019 243 361 9.35E-9 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 Gene3D G3DSA:1.10.8.60 165 241 1.0E-25 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 Pfam PF13177 DNA polymerase III, delta subunit 19 177 3.2E-43 T 20-04-2016 APRE_RS04085 e827bc25683548da4095b55dee528c7d 626 Gene3D G3DSA:1.20.272.10 242 357 3.0E-6 T 20-04-2016 APRE_RS07080 c4d3ce9dc98be9482b66cbe14693ae0d 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 286 2.7E-22 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07080 c4d3ce9dc98be9482b66cbe14693ae0d 287 SUPERFAMILY SSF161098 7 279 1.5E-40 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07080 c4d3ce9dc98be9482b66cbe14693ae0d 287 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 6 282 9.8E-85 T 20-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APRE_RS07080 c4d3ce9dc98be9482b66cbe14693ae0d 287 Gene3D G3DSA:1.10.3720.10 10 286 2.3E-42 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS07080 c4d3ce9dc98be9482b66cbe14693ae0d 287 PANTHER PTHR30425 1 287 1.1E-92 T 20-04-2016 APRE_RS08670 202dab63f7540419d5198964f1675efa 363 Pfam PF00534 Glycosyl transferases group 1 181 297 6.6E-24 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APRE_RS08670 202dab63f7540419d5198964f1675efa 363 PANTHER PTHR12526 4 291 6.3E-33 T 20-04-2016 APRE_RS08670 202dab63f7540419d5198964f1675efa 363 SUPERFAMILY SSF53756 4 358 2.56E-49 T 20-04-2016 APRE_RS08670 202dab63f7540419d5198964f1675efa 363 Pfam PF13439 Glycosyltransferase Family 4 15 171 6.6E-9 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APRE_RS08670 202dab63f7540419d5198964f1675efa 363 Gene3D G3DSA:3.40.50.2000 160 298 3.4E-19 T 20-04-2016 APRE_RS05815 0b17f582bf76fff22969f20d696cd575 337 PANTHER PTHR30106:SF1 1 337 1.0E-94 T 20-04-2016 APRE_RS05815 0b17f582bf76fff22969f20d696cd575 337 PANTHER PTHR30106 1 337 1.0E-94 T 20-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APRE_RS05815 0b17f582bf76fff22969f20d696cd575 337 Pfam PF03601 Conserved hypothetical protein 698 9 315 9.6E-80 T 20-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 Pfam PF13439 Glycosyltransferase Family 4 15 191 5.9E-7 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 SUPERFAMILY SSF53756 4 397 4.45E-43 T 20-04-2016 APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 Gene3D G3DSA:3.40.50.2000 202 362 9.3E-18 T 20-04-2016 APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 PANTHER PTHR12526 61 323 2.9E-24 T 20-04-2016 APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 PANTHER PTHR12526 1 41 2.9E-24 T 20-04-2016 APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 PANTHER PTHR12526 344 397 2.9E-24 T 20-04-2016 APRE_RS00270 0a4684ce99c3f449fc42266f99df1a1d 398 Pfam PF00534 Glycosyl transferases group 1 200 323 1.6E-19 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PANTHER PTHR11014 201 295 2.0E-127 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PANTHER PTHR11014 1 184 2.0E-127 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PANTHER PTHR11014 381 470 2.0E-127 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PANTHER PTHR11014:SF54 201 295 2.0E-127 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PANTHER PTHR11014:SF54 1 184 2.0E-127 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PANTHER PTHR11014:SF54 381 470 2.0E-127 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 438 460 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 245 264 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 100 118 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 352 370 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 416 432 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 158 176 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 134 151 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PRINTS PR00934 X-His dipeptidase (M25) signature 79 98 2.3E-47 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 Gene3D G3DSA:3.40.630.10 385 470 5.1E-94 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 Gene3D G3DSA:3.40.630.10 2 180 5.1E-94 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 SUPERFAMILY SSF53187 385 469 3.93E-58 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 SUPERFAMILY SSF53187 9 181 3.93E-58 T 20-04-2016 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 Pfam PF01546 Peptidase family M20/M25/M40 71 468 6.7E-24 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 471 4.0E-152 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS01720 aca001867c9f97b1cb93a5efac7ca65d 471 PIRSF PIRSF016599 1 471 4.1E-161 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APRE_RS02260 f24fffa409ffbec64c28d2467f416cd3 153 PANTHER PTHR39201:SF1 4 152 4.7E-34 T 20-04-2016 APRE_RS02260 f24fffa409ffbec64c28d2467f416cd3 153 Pfam PF12682 Flavodoxin 4 151 6.1E-25 T 20-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APRE_RS02260 f24fffa409ffbec64c28d2467f416cd3 153 PANTHER PTHR39201 4 152 4.7E-34 T 20-04-2016 APRE_RS02260 f24fffa409ffbec64c28d2467f416cd3 153 Gene3D G3DSA:3.40.50.360 3 147 3.0E-16 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS02260 f24fffa409ffbec64c28d2467f416cd3 153 SUPERFAMILY SSF52218 1 144 1.4E-19 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 Gene3D G3DSA:3.40.50.300 29 267 1.8E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 SUPERFAMILY SSF54752 268 324 1.06E-19 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 SUPERFAMILY SSF52540 5 267 2.23E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PANTHER PTHR22942:SF1 5 335 1.3E-193 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 Hamap MF_00268 Protein RecA [recA]. 5 329 51.26 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PANTHER PTHR22942 5 335 1.3E-193 T 20-04-2016 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 Pfam PF00154 recA bacterial DNA recombination protein 7 268 3.6E-140 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 323 9.5E-170 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 Gene3D G3DSA:3.30.250.10 268 325 1.8E-25 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 ProSitePatterns PS00321 recA signature. 213 221 - T 20-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 SMART SM00382 57 228 3.9E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PRINTS PR00142 RecA protein signature 243 272 2.1E-84 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PRINTS PR00142 RecA protein signature 127 156 2.1E-84 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PRINTS PR00142 RecA protein signature 165 194 2.1E-84 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PRINTS PR00142 RecA protein signature 93 122 2.1E-84 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PRINTS PR00142 RecA protein signature 297 314 2.1E-84 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS03240 0aca508711fc387db895a2dd0d39cdb5 347 PRINTS PR00142 RecA protein signature 210 238 2.1E-84 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APRE_RS07140 f87443a03512ee7229d85065c660bf08 235 Gene3D G3DSA:2.70.98.10 4 139 5.6E-25 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APRE_RS07140 f87443a03512ee7229d85065c660bf08 235 Pfam PF01263 Aldose 1-epimerase 3 152 6.2E-17 T 20-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APRE_RS07140 f87443a03512ee7229d85065c660bf08 235 SUPERFAMILY SSF74650 4 206 6.91E-26 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APRE_RS04530 5514ea7252f631f45b3cc80f3792f22b 280 PIRSF PIRSF006483 1 278 3.1E-71 T 20-04-2016 IPR003740 Uncharacterised membrane protein YitT APRE_RS04530 5514ea7252f631f45b3cc80f3792f22b 280 PANTHER PTHR33545 1 279 1.7E-68 T 20-04-2016 APRE_RS04530 5514ea7252f631f45b3cc80f3792f22b 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 210 6.5E-54 T 20-04-2016 IPR003740 Uncharacterised membrane protein YitT APRE_RS04530 5514ea7252f631f45b3cc80f3792f22b 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 1.6E-15 T 20-04-2016 IPR019264 Domain of unknown function DUF2179 APRE_RS03175 64941d00b3d45982bc33bd9046cabc24 484 Pfam PF02554 Carbon starvation protein CstA 1 141 9.3E-27 T 20-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APRE_RS03175 64941d00b3d45982bc33bd9046cabc24 484 Pfam PF02554 Carbon starvation protein CstA 165 292 1.9E-11 T 20-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APRE_RS03175 64941d00b3d45982bc33bd9046cabc24 484 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 319 434 1.6E-19 T 20-04-2016 IPR025299 CstA, C-terminal domain APRE_RS03175 64941d00b3d45982bc33bd9046cabc24 484 PANTHER PTHR30252 1 481 2.2E-92 T 20-04-2016 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 Gene3D G3DSA:2.40.30.20 104 189 3.2E-25 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 Gene3D G3DSA:2.40.30.20 7 103 2.3E-29 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 Pfam PF00677 Lumazine binding domain 99 179 6.9E-24 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 Pfam PF00677 Lumazine binding domain 3 86 7.8E-16 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 SUPERFAMILY SSF63380 92 190 2.21E-29 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 190 5.2E-64 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 PANTHER PTHR21098 1 188 7.0E-80 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 PIRSF PIRSF000498 1 201 1.2E-69 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APRE_RS05910 993aa8e05b2a14d37a650046f741ebea 204 SUPERFAMILY SSF63380 1 92 1.79E-21 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APRE_RS04650 bbf8ffe024fb249df46e3447deed4f34 576 Pfam PF02272 DHHA1 domain 381 442 2.0E-8 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APRE_RS04650 bbf8ffe024fb249df46e3447deed4f34 576 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 572 3.9E-155 T 20-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APRE_RS04650 bbf8ffe024fb249df46e3447deed4f34 576 SUPERFAMILY SSF64182 52 447 3.79E-101 T 20-04-2016 APRE_RS04650 bbf8ffe024fb249df46e3447deed4f34 576 Pfam PF01368 DHH family 78 217 1.0E-11 T 20-04-2016 IPR001667 DDH domain APRE_RS04650 bbf8ffe024fb249df46e3447deed4f34 576 PANTHER PTHR30255 1 576 2.5E-177 T 20-04-2016 APRE_RS04650 bbf8ffe024fb249df46e3447deed4f34 576 PANTHER PTHR30255:SF2 1 576 2.5E-177 T 20-04-2016 APRE_RS02545 d8086608fd007b2ca113903537566c05 228 SUPERFAMILY SSF51395 54 204 2.23E-15 T 20-04-2016 APRE_RS02545 d8086608fd007b2ca113903537566c05 228 Gene3D G3DSA:3.20.20.70 82 204 8.5E-13 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS05395 b8a41b8985bb4118ec40341832c7eb6a 163 PANTHER PTHR21021:SF15 12 159 1.7E-37 T 20-04-2016 APRE_RS05395 b8a41b8985bb4118ec40341832c7eb6a 163 SUPERFAMILY SSF55781 19 157 1.88E-30 T 20-04-2016 IPR029016 GAF domain-like APRE_RS05395 b8a41b8985bb4118ec40341832c7eb6a 163 PANTHER PTHR21021 12 159 1.7E-37 T 20-04-2016 APRE_RS05395 b8a41b8985bb4118ec40341832c7eb6a 163 Gene3D G3DSA:3.30.450.40 19 159 2.7E-35 T 20-04-2016 IPR029016 GAF domain-like APRE_RS05395 b8a41b8985bb4118ec40341832c7eb6a 163 Pfam PF13185 GAF domain 48 157 1.4E-6 T 20-04-2016 IPR003018 GAF domain GO:0005515 APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 PANTHER PTHR24220:SF494 5 232 1.7E-108 T 20-04-2016 APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 Pfam PF00005 ABC transporter 23 171 7.7E-36 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 Gene3D G3DSA:3.40.50.300 2 221 3.0E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 PANTHER PTHR24220 5 232 1.7E-108 T 20-04-2016 APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 SMART SM00382 32 219 5.4E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS05565 ffbdad7f83c3a20094a06cb195abe207 251 SUPERFAMILY SSF52540 3 223 6.21E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 261 33.368 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 Pfam PF03309 Type III pantothenate kinase 2 204 3.7E-63 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 257 3.0E-62 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 Gene3D G3DSA:3.30.420.40 96 262 6.7E-52 T 20-04-2016 APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 PANTHER PTHR34265 1 263 1.6E-66 T 20-04-2016 APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 SUPERFAMILY SSF53067 124 260 8.88E-34 T 20-04-2016 APRE_RS03275 6f87631abbd2f699226a81ac1c37c5a7 263 SUPERFAMILY SSF53067 1 122 6.7E-32 T 20-04-2016 APRE_RS06655 de78f315c49db5aeec87281f4817cc61 88 SUPERFAMILY SSF82771 1 73 4.05E-16 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS06655 de78f315c49db5aeec87281f4817cc61 88 PANTHER PTHR34477 1 80 3.2E-36 T 20-04-2016 APRE_RS06655 de78f315c49db5aeec87281f4817cc61 88 PANTHER PTHR34477:SF1 1 80 3.2E-36 T 20-04-2016 APRE_RS06655 de78f315c49db5aeec87281f4817cc61 88 Pfam PF01541 GIY-YIG catalytic domain 3 74 4.6E-17 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APRE_RS08175 2f1ea6985f0b586d2b905dcaab00f607 284 SUPERFAMILY SSF51658 15 275 3.73E-30 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APRE_RS08175 2f1ea6985f0b586d2b905dcaab00f607 284 Gene3D G3DSA:3.20.20.150 2 275 1.4E-43 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APRE_RS08175 2f1ea6985f0b586d2b905dcaab00f607 284 Pfam PF01261 Xylose isomerase-like TIM barrel 24 233 3.0E-14 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APRE_RS08175 2f1ea6985f0b586d2b905dcaab00f607 284 PANTHER PTHR40117 1 284 5.5E-53 T 20-04-2016 APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 PRINTS PR00812 Bacterial general secretion pathway protein F signature 344 363 1.3E-15 T 20-04-2016 IPR003004 GspF/PilC family APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 PRINTS PR00812 Bacterial general secretion pathway protein F signature 26 38 1.3E-15 T 20-04-2016 IPR003004 GspF/PilC family APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 PRINTS PR00812 Bacterial general secretion pathway protein F signature 125 153 1.3E-15 T 20-04-2016 IPR003004 GspF/PilC family APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 PRINTS PR00812 Bacterial general secretion pathway protein F signature 328 342 1.3E-15 T 20-04-2016 IPR003004 GspF/PilC family APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 PANTHER PTHR30012 21 364 3.8E-76 T 20-04-2016 APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 Pfam PF00482 Type II secretion system (T2SS), protein F 30 153 2.7E-25 T 20-04-2016 IPR018076 Type II secretion system F domain APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 Pfam PF00482 Type II secretion system (T2SS), protein F 236 355 6.6E-20 T 20-04-2016 IPR018076 Type II secretion system F domain APRE_RS03385 ccb52a6f4ce33c3f97e024f642627a15 364 PANTHER PTHR30012:SF0 21 364 3.8E-76 T 20-04-2016 APRE_RS00620 55bf05f014e6b83f313c6e36cabf4ed1 449 PANTHER PTHR32024:SF1 16 449 2.5E-172 T 20-04-2016 APRE_RS00620 55bf05f014e6b83f313c6e36cabf4ed1 449 Pfam PF02386 Cation transport protein 41 440 2.3E-67 T 20-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APRE_RS00620 55bf05f014e6b83f313c6e36cabf4ed1 449 PANTHER PTHR32024 16 449 2.5E-172 T 20-04-2016 APRE_RS00620 55bf05f014e6b83f313c6e36cabf4ed1 449 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 35 420 3.3E-105 T 20-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APRE_RS06190 9c6e1d90d12a2305fc607c444486024f 453 Gene3D G3DSA:3.90.226.10 328 387 8.1E-13 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS06190 9c6e1d90d12a2305fc607c444486024f 453 Gene3D G3DSA:3.90.226.10 206 289 8.1E-13 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS06190 9c6e1d90d12a2305fc607c444486024f 453 SUPERFAMILY SSF52096 105 295 5.14E-12 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS06190 9c6e1d90d12a2305fc607c444486024f 453 SUPERFAMILY SSF52096 353 387 5.14E-12 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APRE_RS06190 9c6e1d90d12a2305fc607c444486024f 453 Pfam PF03572 Peptidase family S41 233 387 1.5E-5 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APRE_RS07125 4b061a6ed744a2648acb441e9de304d8 77 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 74 1.2E-14 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APRE_RS07125 4b061a6ed744a2648acb441e9de304d8 77 SUPERFAMILY SSF52833 3 75 1.25E-19 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS07125 4b061a6ed744a2648acb441e9de304d8 77 Gene3D G3DSA:3.40.30.10 12 75 3.2E-21 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00585 a87f8aae447027ec3bda691f01d32bee 357 SUPERFAMILY SSF53474 81 353 8.96E-33 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS00585 a87f8aae447027ec3bda691f01d32bee 357 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 10 355 5.5E-133 T 20-04-2016 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 APRE_RS00585 a87f8aae447027ec3bda691f01d32bee 357 Gene3D G3DSA:3.40.50.1820 49 356 1.4E-47 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS00585 a87f8aae447027ec3bda691f01d32bee 357 PANTHER PTHR36837 16 357 3.2E-109 T 20-04-2016 APRE_RS00585 a87f8aae447027ec3bda691f01d32bee 357 Pfam PF00561 alpha/beta hydrolase fold 87 335 3.6E-19 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APRE_RS01365 26c232d065d89a40d7ce806a566b5bff 259 SUPERFAMILY SSF53448 29 230 4.41E-16 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS01365 26c232d065d89a40d7ce806a566b5bff 259 Pfam PF00535 Glycosyl transferase family 2 39 137 3.8E-8 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APRE_RS01365 26c232d065d89a40d7ce806a566b5bff 259 Gene3D G3DSA:3.90.550.10 36 187 8.6E-11 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 431 9.0E-67 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 SUPERFAMILY SSF52980 925 1112 4.4E-23 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:3.40.50.300 716 864 2.7E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:3.40.50.300 444 551 2.7E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 SUPERFAMILY SSF52540 4 179 2.15E-104 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 SUPERFAMILY SSF52540 325 765 2.15E-104 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 SUPERFAMILY SSF52540 797 828 2.15E-104 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:3.40.50.300 5 163 2.3E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:3.40.50.300 335 433 2.3E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Pfam PF12705 PD-(D/E)XK nuclease superfamily 963 1112 2.7E-7 T 20-04-2016 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070 692 763 1.2E-149 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070 9 185 1.2E-149 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070 796 1110 1.2E-149 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070 310 662 1.2E-149 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Pfam PF13361 UvrD-like helicase C-terminal domain 440 819 3.8E-38 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:3.90.320.10 1049 1110 3.0E-7 T 20-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:3.90.320.10 915 1048 7.0E-7 T 20-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070:SF14 692 763 1.2E-149 T 20-04-2016 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070:SF14 9 185 1.2E-149 T 20-04-2016 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070:SF14 796 1110 1.2E-149 T 20-04-2016 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 PANTHER PTHR11070:SF14 310 662 1.2E-149 T 20-04-2016 APRE_RS02760 ec2d4cb2f86cdd0beefe39bd32ed88d7 1121 Gene3D G3DSA:1.10.486.10 559 701 4.4E-18 T 20-04-2016 APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 Pfam PF00149 Calcineurin-like phosphoesterase 2 216 4.2E-14 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 SUPERFAMILY SSF56300 2 294 2.81E-42 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 PANTHER PTHR30337 1 364 8.5E-51 T 20-04-2016 APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 265 346 3.2E-7 T 20-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 2 243 8.6E-41 T 20-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 PANTHER PTHR30337:SF0 1 364 8.5E-51 T 20-04-2016 APRE_RS02745 c65bbee832d62ffb56416158f9b655da 371 Gene3D G3DSA:3.60.21.10 2 262 6.4E-58 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Gene3D G3DSA:3.40.50.300 188 282 9.5E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Gene3D G3DSA:3.40.50.300 3 106 9.5E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 SUPERFAMILY SSF52540 4 632 5.33E-170 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Pfam PF13361 UvrD-like helicase C-terminal domain 274 608 1.0E-77 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 269 1.2E-74 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Gene3D G3DSA:1.10.10.160 110 187 1.9E-16 T 20-04-2016 IPR013986 DExx box DNA helicase domain APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 PANTHER PTHR11070:SF27 3 730 2.8E-206 T 20-04-2016 APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Gene3D G3DSA:3.40.50.300 546 632 7.3E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Gene3D G3DSA:3.40.50.300 283 384 7.3E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 PANTHER PTHR11070 3 730 2.8E-206 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS05015 1530d3f560023752bcfaa1c606dc4489 731 Gene3D G3DSA:1.10.486.10 385 534 3.1E-43 T 20-04-2016 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 SUPERFAMILY SSF82829 212 316 7.32E-8 T 20-04-2016 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 4 313 21.9 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 Pfam PF11734 TilS substrate C-terminal domain 378 447 2.2E-14 T 20-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 PANTHER PTHR11807 2 455 3.3E-78 T 20-04-2016 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 SUPERFAMILY SSF56037 367 450 2.62E-21 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 23 205 6.4E-50 T 20-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 378 422 3.0E-17 T 20-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 Gene3D G3DSA:3.40.50.620 2 187 2.8E-13 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 SMART SM00977 378 450 8.1E-24 T 20-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 Pfam PF01171 PP-loop family 23 200 6.9E-45 T 20-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 SUPERFAMILY SSF52402 9 227 4.19E-49 T 20-04-2016 APRE_RS03260 f149d6fb34fc337bd953a95b2c374f7f 456 PANTHER PTHR11807:SF2 2 455 3.3E-78 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APRE_RS07910 dedc8ebc063401d80f984fcc847c770c 329 Gene3D G3DSA:2.40.100.10 239 328 2.0E-20 T 20-04-2016 IPR029000 Cyclophilin-like domain APRE_RS07910 dedc8ebc063401d80f984fcc847c770c 329 PANTHER PTHR38435 1 329 2.9E-48 T 20-04-2016 APRE_RS07910 dedc8ebc063401d80f984fcc847c770c 329 SUPERFAMILY SSF50891 237 326 8.72E-15 T 20-04-2016 IPR029000 Cyclophilin-like domain APRE_RS07910 dedc8ebc063401d80f984fcc847c770c 329 SUPERFAMILY SSF51445 1 207 9.69E-47 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS07910 dedc8ebc063401d80f984fcc847c770c 329 Pfam PF05913 Bacterial protein of unknown function (DUF871) 1 326 1.8E-79 T 20-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic APRE_RS07910 dedc8ebc063401d80f984fcc847c770c 329 Gene3D G3DSA:3.20.20.70 1 221 4.4E-52 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00830 0735440f315f9514a29e76fcd08180a9 350 Pfam PF13349 Putative adhesin 90 350 4.8E-11 T 20-04-2016 IPR025164 Putative adhesin APRE_RS02400 8537dfc7333e684f0cb4a2fefc288b82 166 SUPERFAMILY SSF52833 2 160 5.18E-36 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS02400 8537dfc7333e684f0cb4a2fefc288b82 166 PANTHER PTHR10681:SF81 2 165 9.7E-44 T 20-04-2016 APRE_RS02400 8537dfc7333e684f0cb4a2fefc288b82 166 Pfam PF08534 Redoxin 18 158 1.0E-20 T 20-04-2016 IPR013740 Redoxin GO:0016491 APRE_RS02400 8537dfc7333e684f0cb4a2fefc288b82 166 Gene3D G3DSA:3.40.30.10 2 165 1.3E-42 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS02400 8537dfc7333e684f0cb4a2fefc288b82 166 PANTHER PTHR10681 2 165 9.7E-44 T 20-04-2016 APRE_RS01520 9ecc48ab45c4980ff7062b7bdd5b715e 286 PANTHER PTHR30429 44 286 2.1E-95 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01520 9ecc48ab45c4980ff7062b7bdd5b715e 286 PANTHER PTHR30429 1 28 2.1E-95 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01520 9ecc48ab45c4980ff7062b7bdd5b715e 286 Pfam PF03180 NLPA lipoprotein 48 286 4.4E-80 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01520 9ecc48ab45c4980ff7062b7bdd5b715e 286 SUPERFAMILY SSF53850 47 286 2.61E-78 T 20-04-2016 APRE_RS01520 9ecc48ab45c4980ff7062b7bdd5b715e 286 PIRSF PIRSF002854 1 286 3.5E-83 T 20-04-2016 IPR004872 Lipoprotein NlpA family APRE_RS01520 9ecc48ab45c4980ff7062b7bdd5b715e 286 Gene3D G3DSA:3.40.190.10 47 174 9.2E-48 T 20-04-2016 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 2.0E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 PRINTS PR00173 Glutamate-aspartate symporter signature 277 303 2.0E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 PRINTS PR00173 Glutamate-aspartate symporter signature 341 361 2.0E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 PRINTS PR00173 Glutamate-aspartate symporter signature 54 74 2.0E-7 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 PANTHER PTHR11958:SF53 18 390 2.4E-144 T 20-04-2016 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 Pfam PF00375 Sodium:dicarboxylate symporter family 14 385 2.9E-73 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 Gene3D G3DSA:1.10.3860.10 7 389 6.8E-57 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 SUPERFAMILY SSF118215 14 385 5.75E-70 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS06255 6f3fd66c1492f02e25432c1747f56791 397 PANTHER PTHR11958 18 390 2.4E-144 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS03620 261f0b031c2b84219fc3d62283b514c9 49 SUPERFAMILY SSF53098 5 45 7.21E-7 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS03620 261f0b031c2b84219fc3d62283b514c9 49 Pfam PF13333 Integrase core domain 3 47 7.7E-15 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APRE_RS03620 261f0b031c2b84219fc3d62283b514c9 49 Gene3D G3DSA:3.30.420.10 3 43 1.5E-6 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS03250 f067cd69ecfb6151b4188e95c1c562ad 81 PIRSF PIRSF038881 1 81 3.9E-26 T 20-04-2016 IPR025490 RNA-binding protein, HP1423 type APRE_RS03250 f067cd69ecfb6151b4188e95c1c562ad 81 Gene3D G3DSA:3.10.290.10 1 77 3.4E-21 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS03250 f067cd69ecfb6151b4188e95c1c562ad 81 SUPERFAMILY SSF55174 1 74 1.28E-18 T 20-04-2016 APRE_RS03250 f067cd69ecfb6151b4188e95c1c562ad 81 SMART SM00363 1 65 7.4E-12 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS03250 f067cd69ecfb6151b4188e95c1c562ad 81 Pfam PF01479 S4 domain 1 47 6.4E-12 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS05775 c301bcbbd78d220c947b92264760bdd9 230 PANTHER PTHR38451 1 229 1.7E-29 T 20-04-2016 APRE_RS05775 c301bcbbd78d220c947b92264760bdd9 230 PIRSF PIRSF018637 1 229 8.9E-42 T 20-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 APRE_RS05775 c301bcbbd78d220c947b92264760bdd9 230 Pfam PF12847 Methyltransferase domain 4 152 1.3E-42 T 20-04-2016 APRE_RS05775 c301bcbbd78d220c947b92264760bdd9 230 Gene3D G3DSA:3.40.50.150 10 82 2.0E-11 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS05775 c301bcbbd78d220c947b92264760bdd9 230 SUPERFAMILY SSF53335 5 102 2.17E-9 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS04000 c42d862195cd43d8c75f837e77945dd3 1143 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 248 552 0.005 T 20-04-2016 APRE_RS04000 c42d862195cd43d8c75f837e77945dd3 1143 Pfam PF02687 FtsX-like permease family 627 742 3.9E-11 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APRE_RS04000 c42d862195cd43d8c75f837e77945dd3 1143 Pfam PF02687 FtsX-like permease family 1018 1126 1.1E-15 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APRE_RS04000 c42d862195cd43d8c75f837e77945dd3 1143 PANTHER PTHR30287 600 1143 5.0E-33 T 20-04-2016 APRE_RS04000 c42d862195cd43d8c75f837e77945dd3 1143 PANTHER PTHR30287 1 217 5.0E-33 T 20-04-2016 APRE_RS05970 4e3fa4627bfe9bef337e1f6878ab7e48 386 Pfam PF01594 Domain of unknown function DUF20 16 350 6.8E-36 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APRE_RS05970 4e3fa4627bfe9bef337e1f6878ab7e48 386 PANTHER PTHR21716 5 350 1.2E-29 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APRE_RS05685 ae61a2acb4d0bc860b9ba70d46218660 258 Gene3D G3DSA:3.40.50.1580 56 252 5.0E-46 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APRE_RS05685 ae61a2acb4d0bc860b9ba70d46218660 258 Pfam PF01048 Phosphorylase superfamily 60 238 2.9E-26 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APRE_RS05685 ae61a2acb4d0bc860b9ba70d46218660 258 SUPERFAMILY SSF53167 54 253 3.53E-46 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APRE_RS02045 aa375a5263c80bde29b1b4ba5ea019a4 239 PANTHER PTHR12598 1 208 5.4E-85 T 20-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APRE_RS02045 aa375a5263c80bde29b1b4ba5ea019a4 239 PANTHER PTHR12598:SF0 1 208 5.4E-85 T 20-04-2016 APRE_RS02045 aa375a5263c80bde29b1b4ba5ea019a4 239 Gene3D G3DSA:3.20.20.380 2 237 2.0E-78 T 20-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 APRE_RS02045 aa375a5263c80bde29b1b4ba5ea019a4 239 Pfam PF03932 CutC family 2 201 1.2E-63 T 20-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APRE_RS02045 aa375a5263c80bde29b1b4ba5ea019a4 239 SUPERFAMILY SSF110395 2 216 8.89E-57 T 20-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 APRE_RS03650 6aa8957826b26d95c0a4e92c0bf50803 292 Pfam PF00950 ABC 3 transport family 12 274 3.6E-62 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APRE_RS03650 6aa8957826b26d95c0a4e92c0bf50803 292 PANTHER PTHR30477:SF3 1 287 3.1E-69 T 20-04-2016 APRE_RS03650 6aa8957826b26d95c0a4e92c0bf50803 292 Gene3D G3DSA:1.10.3470.10 49 268 2.8E-14 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS03650 6aa8957826b26d95c0a4e92c0bf50803 292 SUPERFAMILY SSF81345 13 264 4.32E-25 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS03650 6aa8957826b26d95c0a4e92c0bf50803 292 PANTHER PTHR30477 1 287 3.1E-69 T 20-04-2016 APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 171 7.5E-61 T 20-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 SUPERFAMILY SSF55120 2 231 1.01E-78 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 PANTHER PTHR13767 2 290 5.7E-105 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 PANTHER PTHR13767:SF2 2 290 5.7E-105 T 20-04-2016 APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 290 18.257 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 172 214 5.4E-10 T 20-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APRE_RS03210 9895f53bc57814ec80ca86ceef736ce7 298 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 208 3.2E-79 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 261 4.4E-56 T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 Gene3D G3DSA:3.40.50.1000 2 74 9.4E-51 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 Gene3D G3DSA:3.40.50.1000 180 267 9.4E-51 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 234 4.3E-21 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 PANTHER PTHR10000:SF8 2 267 4.4E-61 T 20-04-2016 APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 SUPERFAMILY SSF56784 2 267 1.18E-65 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 Gene3D G3DSA:3.30.1240.10 85 179 2.3E-18 T 20-04-2016 APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 261 1.6E-59 T 20-04-2016 IPR023214 HAD-like domain APRE_RS01220 71d58ebde7dc9d377d71d1b876fd5361 269 PANTHER PTHR10000 2 267 4.4E-61 T 20-04-2016 APRE_RS01185 249f631f97c59371b63fd7654475718d 64 SUPERFAMILY SSF47598 4 49 6.67E-10 T 20-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APRE_RS01185 249f631f97c59371b63fd7654475718d 64 Pfam PF07878 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 10 45 4.2E-6 T 20-04-2016 IPR012869 CopG-like ribbon-helix-helix domain APRE_RS01185 249f631f97c59371b63fd7654475718d 64 Gene3D G3DSA:1.10.1220.10 4 52 7.9E-7 T 20-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APRE_RS04820 097f1bb84d8abb8f7cee0c2dedc8e33e 397 PANTHER PTHR30217:SF6 1 396 6.5E-172 T 20-04-2016 APRE_RS04820 097f1bb84d8abb8f7cee0c2dedc8e33e 397 PANTHER PTHR30217 1 396 6.5E-172 T 20-04-2016 APRE_RS04820 097f1bb84d8abb8f7cee0c2dedc8e33e 397 ProSitePatterns PS01276 Peptidase family U32 signature. 150 168 - T 20-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS04820 097f1bb84d8abb8f7cee0c2dedc8e33e 397 Pfam PF16325 Peptidase family U32 C-terminal domain 310 392 1.6E-24 T 20-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS04820 097f1bb84d8abb8f7cee0c2dedc8e33e 397 SUPERFAMILY SSF51366 2 131 8.95E-5 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APRE_RS04820 097f1bb84d8abb8f7cee0c2dedc8e33e 397 Pfam PF01136 Peptidase family U32 63 297 1.3E-100 T 20-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS00645 479d181dfcc630176b71dd9b12822941 322 SUPERFAMILY SSF55931 5 235 5.33E-27 T 20-04-2016 APRE_RS00645 479d181dfcc630176b71dd9b12822941 322 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 5 153 1.6E-17 T 20-04-2016 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: REACT_13 APRE_RS00645 479d181dfcc630176b71dd9b12822941 322 Gene3D G3DSA:3.30.590.10 5 231 2.2E-28 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APRE_RS04770 b380ccaf64f10b1dbe9975080052b194 102 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 4 100 1.1E-32 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APRE_RS04770 b380ccaf64f10b1dbe9975080052b194 102 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 101 21.611 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APRE_RS04770 b380ccaf64f10b1dbe9975080052b194 102 SUPERFAMILY SSF81301 2 101 3.43E-32 T 20-04-2016 APRE_RS04770 b380ccaf64f10b1dbe9975080052b194 102 PANTHER PTHR21043 1 102 3.0E-28 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APRE_RS04770 b380ccaf64f10b1dbe9975080052b194 102 Pfam PF02410 Ribosomal silencing factor during starvation 5 100 1.1E-26 T 20-04-2016 APRE_RS04770 b380ccaf64f10b1dbe9975080052b194 102 Gene3D G3DSA:3.30.460.10 2 101 6.6E-33 T 20-04-2016 APRE_RS02555 9448a8cdf0570e29474cda93dc4feacf 94 SUPERFAMILY SSF54995 1 94 1.96E-32 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS02555 9448a8cdf0570e29474cda93dc4feacf 94 PANTHER PTHR21011 1 94 1.4E-27 T 20-04-2016 APRE_RS02555 9448a8cdf0570e29474cda93dc4feacf 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.744 T 20-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS02555 9448a8cdf0570e29474cda93dc4feacf 94 Gene3D G3DSA:3.30.70.60 1 93 5.0E-34 T 20-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APRE_RS02555 9448a8cdf0570e29474cda93dc4feacf 94 Pfam PF01250 Ribosomal protein S6 3 91 4.6E-29 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS02555 9448a8cdf0570e29474cda93dc4feacf 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.1E-27 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS04535 b3970cd94cf05ffe079ddcaa190d26b9 185 PANTHER PTHR37296 1 181 8.2E-40 T 20-04-2016 APRE_RS04535 b3970cd94cf05ffe079ddcaa190d26b9 185 SMART SM00316 45 108 5.4E-7 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS04535 b3970cd94cf05ffe079ddcaa190d26b9 185 Gene3D G3DSA:2.40.50.140 42 109 7.2E-6 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS04535 b3970cd94cf05ffe079ddcaa190d26b9 185 SUPERFAMILY SSF50249 43 112 5.07E-11 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 Gene3D G3DSA:3.75.10.10 4 66 1.5E-122 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 Gene3D G3DSA:3.75.10.10 149 400 1.5E-122 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 Hamap MF_00242 Arginine deiminase [arcA]. 1 401 40.443 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PIRSF PIRSF006356 1 401 3.4E-152 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 Pfam PF02274 Amidinotransferase 18 399 1.1E-85 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 SUPERFAMILY SSF55909 1 401 5.0E-121 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PANTHER PTHR12737 4 92 1.2E-101 T 20-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PANTHER PTHR12737 306 401 1.2E-101 T 20-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PANTHER PTHR12737 149 287 1.2E-101 T 20-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PANTHER PTHR12737:SF13 4 92 1.2E-101 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PANTHER PTHR12737:SF13 306 401 1.2E-101 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PANTHER PTHR12737:SF13 149 287 1.2E-101 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 Gene3D G3DSA:1.10.3930.10 68 140 2.5E-23 T 20-04-2016 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.5E-51 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.5E-51 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.5E-51 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PRINTS PR01466 Bacterial arginine deiminase signature 338 355 2.5E-51 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PRINTS PR01466 Bacterial arginine deiminase signature 358 372 2.5E-51 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS01425 9c3395e3b7e3f07adcabde2fc38e743d 401 PRINTS PR01466 Bacterial arginine deiminase signature 381 399 2.5E-51 T 20-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.1E-31 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.1E-31 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.1E-31 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 PANTHER PTHR11655 1 179 8.1E-82 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 Gene3D G3DSA:3.90.930.12 2 83 2.7E-27 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 35.893 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 PIRSF PIRSF002162 1 178 1.4E-48 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 1.7E-70 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 SUPERFAMILY SSF56053 84 178 2.49E-36 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 Gene3D G3DSA:3.90.930.12 84 178 4.1E-39 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 20-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 Pfam PF00347 Ribosomal protein L6 92 165 1.3E-18 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 Pfam PF00347 Ribosomal protein L6 11 83 3.7E-17 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 PANTHER PTHR11655:SF14 1 179 8.1E-82 T 20-04-2016 APRE_RS07995 954066cd11bfe4085dbb22ef341d538d 179 SUPERFAMILY SSF56053 1 83 5.28E-22 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 SMART SM00382 107 257 2.4E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 404 51.005 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Pfam PF06689 ClpX C4-type zinc finger 10 46 2.4E-18 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 SMART SM01086 307 401 9.4E-34 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Gene3D G3DSA:1.10.8.60 307 403 1.3E-35 T 20-04-2016 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 SUPERFAMILY SSF52540 60 391 1.81E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 301 5.6E-49 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 398 1.4E-192 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 307 384 9.4E-16 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APRE_RS02025 f913a5d647f8de342a13647652585efb 404 SMART SM00994 8 47 4.6E-21 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 SUPERFAMILY SSF57716 9 44 2.71E-11 T 20-04-2016 APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Gene3D G3DSA:3.40.50.300 284 302 6.2E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02025 f913a5d647f8de342a13647652585efb 404 Gene3D G3DSA:3.40.50.300 62 249 6.2E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02025 f913a5d647f8de342a13647652585efb 404 PANTHER PTHR11262 7 404 1.0E-233 T 20-04-2016 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 Pfam PF03448 MgtE intracellular N domain 21 123 2.3E-21 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 TIGRFAM TIGR00400 mgtE: magnesium transporter 11 440 1.3E-111 T 20-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 SMART SM00116 132 185 6.6 T 20-04-2016 IPR000644 CBS domain APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 SMART SM00116 197 243 1.2E-5 T 20-04-2016 IPR000644 CBS domain APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 SUPERFAMILY SSF54631 124 263 7.74E-22 T 20-04-2016 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 Pfam PF01769 Divalent cation transporter 310 432 1.4E-26 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 Gene3D G3DSA:1.25.60.10 11 115 1.9E-20 T 20-04-2016 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 SUPERFAMILY SSF161093 266 439 7.45E-46 T 20-04-2016 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 Pfam PF00571 CBS domain 197 241 1.2E-5 T 20-04-2016 IPR000644 CBS domain APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 Gene3D G3DSA:3.10.580.10 116 250 6.8E-17 T 20-04-2016 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 SMART SM00924 21 125 1.5E-25 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 PANTHER PTHR41394 17 440 2.2E-36 T 20-04-2016 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 Gene3D G3DSA:1.10.357.20 267 440 1.6E-52 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APRE_RS05450 eab9744797272cfcbc4eb5f729defc88 441 SUPERFAMILY SSF158791 11 121 9.02E-22 T 20-04-2016 APRE_RS06505 a3f820253851033e00b168e01f89a6a8 134 SUPERFAMILY SSF54593 8 132 2.44E-11 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APRE_RS06505 a3f820253851033e00b168e01f89a6a8 134 Gene3D G3DSA:3.10.180.10 8 130 4.1E-16 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APRE_RS06980 8c8f72999ed3fe4c8011544c28fc06c9 120 Pfam PF01880 Desulfoferrodoxin 11 115 1.7E-24 T 20-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 APRE_RS06980 8c8f72999ed3fe4c8011544c28fc06c9 120 Gene3D G3DSA:2.60.40.730 4 119 1.2E-35 T 20-04-2016 APRE_RS06980 8c8f72999ed3fe4c8011544c28fc06c9 120 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 10 117 4.9E-27 T 20-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 APRE_RS06980 8c8f72999ed3fe4c8011544c28fc06c9 120 PANTHER PTHR36541 8 119 5.2E-44 T 20-04-2016 APRE_RS06980 8c8f72999ed3fe4c8011544c28fc06c9 120 SUPERFAMILY SSF49367 7 119 3.4E-33 T 20-04-2016 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 APRE_RS06980 8c8f72999ed3fe4c8011544c28fc06c9 120 PANTHER PTHR36541:SF2 8 119 5.2E-44 T 20-04-2016 APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 SUPERFAMILY SSF102114 121 419 4.05E-60 T 20-04-2016 APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 Gene3D G3DSA:3.80.30.20 125 347 3.2E-36 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 PANTHER PTHR13932 78 429 1.9E-75 T 20-04-2016 APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 SMART SM00729 124 339 1.3E-35 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 55 423 1.2E-99 T 20-04-2016 IPR023995 Coproporphyrinogen III oxidase KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00251 APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 PANTHER PTHR13932:SF1 78 429 1.9E-75 T 20-04-2016 APRE_RS01715 5cab74e51b7ea0e92810ffb251fa1de1 438 Pfam PF04055 Radical SAM superfamily 132 287 5.7E-16 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS03690 46db9403c5f79fc67dbd926eb99b6aef 208 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 58 201 1.5E-29 T 20-04-2016 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 Pfam PF01183 Glycosyl hydrolases family 25 112 293 4.9E-27 T 20-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 Pfam PF08230 Cpl-7 lysozyme C-terminal domain 321 359 9.4E-19 T 20-04-2016 IPR013168 Cpl-7 lysozyme, C-terminal APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 SMART SM01095 321 360 8.4E-15 T 20-04-2016 IPR013168 Cpl-7 lysozyme, C-terminal APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 PANTHER PTHR34135 80 347 7.9E-26 T 20-04-2016 APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 Gene3D G3DSA:3.20.20.80 110 308 7.2E-46 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 PANTHER PTHR34135:SF2 80 347 7.9E-26 T 20-04-2016 APRE_RS02970 19838a96c819cd1fb12bafd9fc8192b3 364 SUPERFAMILY SSF51445 110 307 6.6E-33 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS07400 4c3973c6d98a596880be1f0ba1995e34 342 Pfam PF00005 ABC transporter 22 153 7.3E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS07400 4c3973c6d98a596880be1f0ba1995e34 342 SUPERFAMILY SSF52540 5 235 1.36E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07400 4c3973c6d98a596880be1f0ba1995e34 342 SMART SM00382 22 203 3.2E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS07400 4c3973c6d98a596880be1f0ba1995e34 342 PANTHER PTHR24220 16 203 3.7E-57 T 20-04-2016 APRE_RS07400 4c3973c6d98a596880be1f0ba1995e34 342 Gene3D G3DSA:3.40.50.300 16 223 2.3E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 Pfam PF01632 Ribosomal protein L35 4 62 1.3E-22 T 20-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 PANTHER PTHR33343 4 63 1.3E-19 T 20-04-2016 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 PRINTS PR00064 Ribosomal protein L35 signature 22 36 1.4E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 PRINTS PR00064 Ribosomal protein L35 signature 4 21 1.4E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 PRINTS PR00064 Ribosomal protein L35 signature 37 55 1.4E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 4 63 1.6E-24 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 6 32 - T 20-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 2 65 17.315 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APRE_RS06885 76c2ea0676dda81bf0e9f0596551784d 65 SUPERFAMILY SSF143034 4 64 1.57E-20 T 20-04-2016 APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 PRINTS PR00354 7Fe ferredoxin signature 18 28 4.6E-5 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 PRINTS PR00354 7Fe ferredoxin signature 34 51 4.6E-5 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 PANTHER PTHR24960 1 55 1.0E-13 T 20-04-2016 APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 Gene3D G3DSA:3.30.70.20 4 55 2.4E-19 T 20-04-2016 APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 Pfam PF14697 4Fe-4S dicluster domain 4 54 1.7E-10 T 20-04-2016 APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APRE_RS05725 0c4f3db91a3618428618f5ba3aafb3ea 57 SUPERFAMILY SSF54862 4 55 8.76E-19 T 20-04-2016 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 337 2.4E-84 T 20-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 Gene3D G3DSA:3.30.450.40 180 337 1.3E-30 T 20-04-2016 IPR029016 GAF domain-like APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 PIRSF PIRSF005485 1 337 3.0E-87 T 20-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 Pfam PF08220 DeoR-like helix-turn-helix domain 34 58 4.6E-6 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 Gene3D G3DSA:1.10.10.10 1 79 5.1E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 SUPERFAMILY SSF46785 1 79 4.54E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 332 25.15 T 20-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 PANTHER PTHR34824 1 337 9.8E-82 T 20-04-2016 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 Pfam PF01628 HrcA protein C terminal domain 107 325 4.1E-44 T 20-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 APRE_RS05950 9814a9ebc1666e2402342e32df061729 337 SUPERFAMILY SSF55781 70 337 3.53E-39 T 20-04-2016 IPR029016 GAF domain-like APRE_RS02755 670aa073b971a24c0c2d645e37e6602f 1121 Pfam PF12705 PD-(D/E)XK nuclease superfamily 770 1094 1.3E-41 T 20-04-2016 APRE_RS02755 670aa073b971a24c0c2d645e37e6602f 1121 PANTHER PTHR41262:SF1 1 1114 9.2E-133 T 20-04-2016 APRE_RS02755 670aa073b971a24c0c2d645e37e6602f 1121 SUPERFAMILY SSF52540 277 675 2.12E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02755 670aa073b971a24c0c2d645e37e6602f 1121 Gene3D G3DSA:3.40.50.300 287 361 1.4E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02755 670aa073b971a24c0c2d645e37e6602f 1121 SUPERFAMILY SSF52980 788 959 3.75E-6 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APRE_RS02755 670aa073b971a24c0c2d645e37e6602f 1121 PANTHER PTHR41262 1 1114 9.2E-133 T 20-04-2016 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 PANTHER PTHR11804 149 520 2.3E-140 T 20-04-2016 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 PANTHER PTHR11804 42 125 2.3E-140 T 20-04-2016 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 Gene3D G3DSA:1.10.1370.10 97 254 7.9E-6 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 PANTHER PTHR11804:SF28 149 520 2.3E-140 T 20-04-2016 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 PANTHER PTHR11804:SF28 42 125 2.3E-140 T 20-04-2016 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 SUPERFAMILY SSF55486 35 561 4.4E-89 T 20-04-2016 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 Pfam PF01432 Peptidase family M3 307 497 4.5E-16 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 Pfam PF01432 Peptidase family M3 167 269 1.3E-5 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APRE_RS02195 8afbce04699d07f4ab99d75a7028aabd 565 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 20 560 1.0E-175 T 20-04-2016 IPR011976 Peptidase M3B, oligoendopeptidase-related clade 2 APRE_RS01390 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 1 162 1.3E-20 T 20-04-2016 APRE_RS01390 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 216 347 1.3E-20 T 20-04-2016 APRE_RS01390 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF01548 Transposase 4 161 2.7E-35 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APRE_RS01390 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 1 162 1.3E-20 T 20-04-2016 APRE_RS01390 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 216 347 1.3E-20 T 20-04-2016 APRE_RS01390 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF02371 Transposase IS116/IS110/IS902 family 281 356 5.3E-17 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APRE_RS06970 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 1 162 1.3E-20 T 20-04-2016 APRE_RS06970 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 216 347 1.3E-20 T 20-04-2016 APRE_RS06970 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF01548 Transposase 4 161 2.7E-35 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APRE_RS06970 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 1 162 1.3E-20 T 20-04-2016 APRE_RS06970 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 216 347 1.3E-20 T 20-04-2016 APRE_RS06970 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF02371 Transposase IS116/IS110/IS902 family 281 356 5.3E-17 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APRE_RS06075 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 1 162 1.3E-20 T 20-04-2016 APRE_RS06075 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 216 347 1.3E-20 T 20-04-2016 APRE_RS06075 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF01548 Transposase 4 161 2.7E-35 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APRE_RS06075 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 1 162 1.3E-20 T 20-04-2016 APRE_RS06075 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 216 347 1.3E-20 T 20-04-2016 APRE_RS06075 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF02371 Transposase IS116/IS110/IS902 family 281 356 5.3E-17 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APRE_RS03770 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 1 162 1.3E-20 T 20-04-2016 APRE_RS03770 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 216 347 1.3E-20 T 20-04-2016 APRE_RS03770 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF01548 Transposase 4 161 2.7E-35 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APRE_RS03770 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 1 162 1.3E-20 T 20-04-2016 APRE_RS03770 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 216 347 1.3E-20 T 20-04-2016 APRE_RS03770 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF02371 Transposase IS116/IS110/IS902 family 281 356 5.3E-17 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APRE_RS00200 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 1 162 1.3E-20 T 20-04-2016 APRE_RS00200 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055 216 347 1.3E-20 T 20-04-2016 APRE_RS00200 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF01548 Transposase 4 161 2.7E-35 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APRE_RS00200 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 1 162 1.3E-20 T 20-04-2016 APRE_RS00200 fa39a4450d24ad55dfa11e05d366286b 407 PANTHER PTHR33055:SF3 216 347 1.3E-20 T 20-04-2016 APRE_RS00200 fa39a4450d24ad55dfa11e05d366286b 407 Pfam PF02371 Transposase IS116/IS110/IS902 family 281 356 5.3E-17 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APRE_RS06150 42e4757851bfddbe37549acffce6bb0e 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 241 1.3E-57 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APRE_RS06150 42e4757851bfddbe37549acffce6bb0e 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 7 240 1.9E-74 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APRE_RS06150 42e4757851bfddbe37549acffce6bb0e 266 PANTHER PTHR30589 4 264 5.0E-94 T 20-04-2016 APRE_RS06150 42e4757851bfddbe37549acffce6bb0e 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 133 145 - T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APRE_RS06150 42e4757851bfddbe37549acffce6bb0e 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 4 245 17.202 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APRE_RS06150 42e4757851bfddbe37549acffce6bb0e 266 PANTHER PTHR30589:SF0 4 264 5.0E-94 T 20-04-2016 APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 Gene3D G3DSA:3.30.360.10 142 326 3.5E-49 T 20-04-2016 APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 PANTHER PTHR22604 1 317 2.4E-58 T 20-04-2016 APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 116 5.1E-21 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 SUPERFAMILY SSF55347 126 290 2.78E-16 T 20-04-2016 APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 SUPERFAMILY SSF51735 2 151 8.93E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 PANTHER PTHR22604:SF76 1 317 2.4E-58 T 20-04-2016 APRE_RS01015 3ccde3f5aa4e9b41ec6187c4ada7a339 326 Gene3D G3DSA:3.40.50.720 1 141 2.0E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS00835 1e56087c1d5036ab68bd4697273e0eb4 373 Pfam PF14897 EpsG family 30 355 4.5E-50 T 20-04-2016 APRE_RS02535 0134132b6bddb66cc44ec0e4f66b4f64 340 Gene3D G3DSA:3.20.20.80 230 276 7.5E-5 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS02535 0134132b6bddb66cc44ec0e4f66b4f64 340 SUPERFAMILY SSF51445 81 296 5.9E-12 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS02535 0134132b6bddb66cc44ec0e4f66b4f64 340 Gene3D G3DSA:3.20.20.80 81 186 1.0E-4 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS02535 0134132b6bddb66cc44ec0e4f66b4f64 340 Gene3D G3DSA:2.60.40.1180 277 337 5.2E-15 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APRE_RS02635 0c6dd52eae4f5fc6313ae60740059d9e 150 SUPERFAMILY SSF52833 1 150 2.88E-33 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS02635 0c6dd52eae4f5fc6313ae60740059d9e 150 PIRSF PIRSF000239 1 150 3.3E-18 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APRE_RS02635 0c6dd52eae4f5fc6313ae60740059d9e 150 Pfam PF00578 AhpC/TSA family 5 131 3.4E-26 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APRE_RS02635 0c6dd52eae4f5fc6313ae60740059d9e 150 PANTHER PTHR10681 3 150 7.8E-28 T 20-04-2016 APRE_RS02635 0c6dd52eae4f5fc6313ae60740059d9e 150 Gene3D G3DSA:3.40.30.10 2 148 8.4E-36 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS05875 df62dd002ebb5badf7862db0f309d362 474 SUPERFAMILY SSF53720 9 472 1.96E-136 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APRE_RS05875 df62dd002ebb5badf7862db0f309d362 474 PANTHER PTHR11699 10 471 5.1E-165 T 20-04-2016 APRE_RS05875 df62dd002ebb5badf7862db0f309d362 474 Pfam PF00171 Aldehyde dehydrogenase family 18 471 1.6E-140 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APRE_RS05875 df62dd002ebb5badf7862db0f309d362 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APRE_RS05875 df62dd002ebb5badf7862db0f309d362 474 Gene3D G3DSA:3.40.309.10 252 446 6.8E-55 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APRE_RS05875 df62dd002ebb5badf7862db0f309d362 474 Gene3D G3DSA:3.40.605.10 6 251 2.9E-69 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APRE_RS08750 8acdc9b220ad71968384e6a8e096351a 267 SUPERFAMILY SSF53474 5 149 1.05E-41 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS08750 8acdc9b220ad71968384e6a8e096351a 267 SUPERFAMILY SSF53474 194 266 1.05E-41 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS08750 8acdc9b220ad71968384e6a8e096351a 267 PANTHER PTHR11614:SF87 3 267 2.2E-67 T 20-04-2016 APRE_RS08750 8acdc9b220ad71968384e6a8e096351a 267 Pfam PF12146 Serine aminopeptidase, S33 22 249 1.2E-63 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APRE_RS08750 8acdc9b220ad71968384e6a8e096351a 267 Gene3D G3DSA:3.40.50.1820 13 266 8.9E-52 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS08750 8acdc9b220ad71968384e6a8e096351a 267 PANTHER PTHR11614 3 267 2.2E-67 T 20-04-2016 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 PANTHER PTHR24423 49 282 4.1E-33 T 20-04-2016 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 SMART SM00387 181 286 1.3E-17 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 186 281 2.9E-15 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 Gene3D G3DSA:1.10.287.130 72 123 8.1E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 217 231 3.0E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 247 265 3.0E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 283 3.0E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 245 3.0E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 Gene3D G3DSA:3.30.565.10 124 282 2.8E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 SUPERFAMILY SSF55874 129 282 7.2E-25 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 Pfam PF00512 His Kinase A (phospho-acceptor) domain 80 137 2.1E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 SMART SM00388 76 138 1.9E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS03835 df4126a3d3e66122e09492614f49bbd1 286 SUPERFAMILY SSF47384 60 139 1.59E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APRE_RS01670 e5dc028886828ad1ce86baccd061a4a8 384 Pfam PF07690 Major Facilitator Superfamily 14 338 2.4E-20 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APRE_RS01670 e5dc028886828ad1ce86baccd061a4a8 384 Gene3D G3DSA:1.20.1250.20 192 372 8.6E-8 T 20-04-2016 APRE_RS01670 e5dc028886828ad1ce86baccd061a4a8 384 SUPERFAMILY SSF103473 6 378 2.88E-32 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS01670 e5dc028886828ad1ce86baccd061a4a8 384 Gene3D G3DSA:1.20.1250.20 12 189 8.8E-17 T 20-04-2016 APRE_RS08740 23393c8adf61da6c356f7d8b7cf95dde 319 Gene3D G3DSA:1.10.3470.10 6 313 2.0E-86 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS08740 23393c8adf61da6c356f7d8b7cf95dde 319 PANTHER PTHR30472 7 313 7.6E-105 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APRE_RS08740 23393c8adf61da6c356f7d8b7cf95dde 319 SUPERFAMILY SSF81345 6 311 6.28E-69 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS08740 23393c8adf61da6c356f7d8b7cf95dde 319 Pfam PF01032 FecCD transport family 15 311 1.0E-76 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APRE_RS08740 23393c8adf61da6c356f7d8b7cf95dde 319 PANTHER PTHR30472:SF25 7 313 7.6E-105 T 20-04-2016 APRE_RS08585 4d39f6099b634b97f8aee63ddcd277f8 180 Pfam PF03358 NADPH-dependent FMN reductase 1 146 1.2E-31 T 20-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APRE_RS08585 4d39f6099b634b97f8aee63ddcd277f8 180 SUPERFAMILY SSF52218 1 161 2.64E-40 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS08585 4d39f6099b634b97f8aee63ddcd277f8 180 PANTHER PTHR30543:SF6 1 180 6.6E-39 T 20-04-2016 APRE_RS08585 4d39f6099b634b97f8aee63ddcd277f8 180 Gene3D G3DSA:3.40.50.360 1 178 1.7E-41 T 20-04-2016 IPR029039 Flavoprotein-like domain APRE_RS08585 4d39f6099b634b97f8aee63ddcd277f8 180 PANTHER PTHR30543 1 180 6.6E-39 T 20-04-2016 APRE_RS04020 f0afcc26f34644fd37f779111da063ce 225 SUPERFAMILY SSF56300 2 209 6.65E-29 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04020 f0afcc26f34644fd37f779111da063ce 225 Pfam PF00149 Calcineurin-like phosphoesterase 2 192 1.9E-12 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APRE_RS04020 f0afcc26f34644fd37f779111da063ce 225 Gene3D G3DSA:3.60.21.10 1 121 5.2E-47 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04020 f0afcc26f34644fd37f779111da063ce 225 Gene3D G3DSA:3.60.21.10 156 224 5.2E-47 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS04020 f0afcc26f34644fd37f779111da063ce 225 PIRSF PIRSF033094 1 225 9.6E-87 T 20-04-2016 IPR014578 Predicted phosphoesterase, CT488 type APRE_RS08535 ad85bbba231c2df845a27bf2332b0f5e 296 PANTHER PTHR30193 15 293 6.5E-72 T 20-04-2016 APRE_RS08535 ad85bbba231c2df845a27bf2332b0f5e 296 Gene3D G3DSA:1.10.3720.10 59 291 1.1E-56 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08535 ad85bbba231c2df845a27bf2332b0f5e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 291 5.4E-18 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08535 ad85bbba231c2df845a27bf2332b0f5e 296 PANTHER PTHR30193:SF6 15 293 6.5E-72 T 20-04-2016 APRE_RS08535 ad85bbba231c2df845a27bf2332b0f5e 296 SUPERFAMILY SSF161098 53 283 1.44E-53 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00280 0dc34c099f17d204c029c9218d800177 225 Gene3D G3DSA:1.20.1540.10 10 188 1.1E-39 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APRE_RS00280 0dc34c099f17d204c029c9218d800177 225 Pfam PF01694 Rhomboid family 50 188 2.5E-30 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APRE_RS00280 0dc34c099f17d204c029c9218d800177 225 SUPERFAMILY SSF144091 9 193 3.27E-41 T 20-04-2016 APRE_RS00280 0dc34c099f17d204c029c9218d800177 225 PANTHER PTHR22936 11 215 9.4E-34 T 20-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APRE_RS02890 ddd998096b194b4554b6e52d87645e0f 767 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 29 759 4.0E-4 T 20-04-2016 APRE_RS02890 ddd998096b194b4554b6e52d87645e0f 767 SUPERFAMILY SSF58104 395 650 2.96E-5 T 20-04-2016 APRE_RS02890 ddd998096b194b4554b6e52d87645e0f 767 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 280 302 1.1E-5 T 20-04-2016 IPR023908 xxxLxxG heptad repeat APRE_RS02890 ddd998096b194b4554b6e52d87645e0f 767 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 254 278 5.5E-5 T 20-04-2016 IPR023908 xxxLxxG heptad repeat APRE_RS03445 a542972767127173a6fdf1173676bea0 359 Gene3D G3DSA:3.80.30.20 7 231 2.9E-26 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APRE_RS03445 a542972767127173a6fdf1173676bea0 359 SMART SM00729 6 224 5.5E-28 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS03445 a542972767127173a6fdf1173676bea0 359 PANTHER PTHR11135 59 265 7.6E-41 T 20-04-2016 APRE_RS03445 a542972767127173a6fdf1173676bea0 359 SUPERFAMILY SSF102114 11 288 1.18E-45 T 20-04-2016 APRE_RS03445 a542972767127173a6fdf1173676bea0 359 Pfam PF04055 Radical SAM superfamily 12 174 3.3E-16 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS03445 a542972767127173a6fdf1173676bea0 359 Pfam PF16199 Radical_SAM C-terminal domain 185 268 1.6E-19 T 20-04-2016 IPR032432 Radical SAM, C-terminal extension APRE_RS08635 f7fd7e23fea6604e16e2879803f768c3 103 Gene3D G3DSA:3.40.50.10580 3 102 1.1E-22 T 20-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 APRE_RS08635 f7fd7e23fea6604e16e2879803f768c3 103 SUPERFAMILY SSF159468 4 102 3.92E-26 T 20-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 APRE_RS08635 f7fd7e23fea6604e16e2879803f768c3 103 Hamap MF_00312 V-type ATP synthase subunit F [atpF]. 2 102 17.072 T 20-04-2016 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal APRE_RS08635 f7fd7e23fea6604e16e2879803f768c3 103 Pfam PF01990 ATP synthase (F/14-kDa) subunit 4 93 2.8E-24 T 20-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 APRE_RS05795 6b12a9fadaad66bbdee0fd2b211b3c1d 208 SUPERFAMILY SSF56176 136 206 3.27E-7 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APRE_RS05795 6b12a9fadaad66bbdee0fd2b211b3c1d 208 Pfam PF03471 Transporter associated domain 137 207 6.0E-9 T 20-04-2016 IPR005170 Transporter-associated domain APRE_RS05795 6b12a9fadaad66bbdee0fd2b211b3c1d 208 Gene3D G3DSA:3.30.465.10 136 206 2.8E-7 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APRE_RS02155 896454ff351f69f56e4320f125615959 617 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 173 1.7E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS02155 896454ff351f69f56e4320f125615959 617 SUPERFAMILY SSF110942 504 617 3.27E-18 T 20-04-2016 APRE_RS02155 896454ff351f69f56e4320f125615959 617 PANTHER PTHR11528 551 617 2.8E-173 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 PANTHER PTHR11528 4 532 2.8E-173 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 21 30 - T 20-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 186 204 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 88 105 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 163 180 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 113 135 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 70 87 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 22 44 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 PRINTS PR00775 90kDa heat shock protein signature 1 21 2.0E-55 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APRE_RS02155 896454ff351f69f56e4320f125615959 617 SUPERFAMILY SSF55874 3 211 3.27E-58 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS02155 896454ff351f69f56e4320f125615959 617 PIRSF PIRSF002583 1 617 5.2E-176 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 Pfam PF00183 Hsp90 protein 225 617 1.2E-87 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 Pfam PF00183 Hsp90 protein 182 226 2.3E-7 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 617 24.029 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APRE_RS02155 896454ff351f69f56e4320f125615959 617 Gene3D G3DSA:3.30.565.10 2 211 6.2E-74 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS02155 896454ff351f69f56e4320f125615959 617 SUPERFAMILY SSF54211 236 489 2.65E-71 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS06375 dce562c4c5a48eca9dc03dd0ac134cb0 244 PANTHER PTHR31118:SF9 11 243 7.7E-58 T 20-04-2016 APRE_RS06375 dce562c4c5a48eca9dc03dd0ac134cb0 244 PANTHER PTHR31118 11 243 7.7E-58 T 20-04-2016 APRE_RS06375 dce562c4c5a48eca9dc03dd0ac134cb0 244 SUPERFAMILY SSF102198 14 243 2.75E-48 T 20-04-2016 APRE_RS06375 dce562c4c5a48eca9dc03dd0ac134cb0 244 Pfam PF04199 Putative cyclase 17 182 6.4E-32 T 20-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 APRE_RS06375 dce562c4c5a48eca9dc03dd0ac134cb0 244 Gene3D G3DSA:3.50.30.50 14 243 1.9E-51 T 20-04-2016 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 Gene3D G3DSA:3.30.1360.60 2 80 9.5E-19 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 PANTHER PTHR30175 4 462 5.0E-157 T 20-04-2016 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 SUPERFAMILY SSF55604 6 79 9.15E-14 T 20-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 Pfam PF02378 Phosphotransferase system, EIIC 123 403 2.0E-26 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 Pfam PF00367 phosphotransferase system, EIIB 10 40 6.3E-8 T 20-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APRE_RS07900 07e3611d9064210584e4347e6d337e2b 479 PANTHER PTHR30175:SF3 4 462 5.0E-157 T 20-04-2016 APRE_RS01000 497e42567a1791aea84f087298aa73f6 378 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 219 361 6.0E-10 T 20-04-2016 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 PANTHER PTHR30437 1 157 5.1E-52 T 20-04-2016 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 9 157 7.5E-53 T 20-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 Gene3D G3DSA:1.10.287.180 5 77 1.3E-28 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 SUPERFAMILY SSF46557 7 80 1.83E-24 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 20-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 20-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 PIRSF PIRSF006092 1 157 7.0E-48 T 20-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 Gene3D G3DSA:3.10.50.30 82 157 1.9E-25 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 2.8E-29 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.6E-24 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 157 30.327 T 20-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APRE_RS03285 1179e11052a0f41b56367d4ac3edca8a 157 SUPERFAMILY SSF54534 83 156 8.63E-20 T 20-04-2016 APRE_RS02225 76822ebbbb5145fccc692463eaacd033 264 PANTHER PTHR11040:SF33 4 264 1.7E-84 T 20-04-2016 APRE_RS02225 76822ebbbb5145fccc692463eaacd033 264 Pfam PF02535 ZIP Zinc transporter 109 259 3.5E-13 T 20-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APRE_RS02225 76822ebbbb5145fccc692463eaacd033 264 PANTHER PTHR11040 4 264 1.7E-84 T 20-04-2016 APRE_RS02340 37486926e547869f081f5b69b550a6d7 451 Gene3D G3DSA:3.20.70.20 2 451 2.0E-201 T 20-04-2016 APRE_RS02340 37486926e547869f081f5b69b550a6d7 451 Hamap MF_01221 UPF0210 protein . 1 451 49.708 T 20-04-2016 IPR007841 Uncharacterised protein family UPF0210 APRE_RS02340 37486926e547869f081f5b69b550a6d7 451 PANTHER PTHR37560:SF2 1 451 2.7E-203 T 20-04-2016 APRE_RS02340 37486926e547869f081f5b69b550a6d7 451 SUPERFAMILY SSF51998 2 446 7.6E-173 T 20-04-2016 APRE_RS02340 37486926e547869f081f5b69b550a6d7 451 PANTHER PTHR37560 1 451 2.7E-203 T 20-04-2016 APRE_RS02340 37486926e547869f081f5b69b550a6d7 451 Pfam PF05167 Uncharacterised ACR (DUF711) 12 415 2.3E-172 T 20-04-2016 IPR007841 Uncharacterised protein family UPF0210 APRE_RS04575 84f0f3f9ced8946c789f7ddfdcf8ef84 300 PANTHER PTHR18964 1 297 1.8E-77 T 20-04-2016 APRE_RS04575 84f0f3f9ced8946c789f7ddfdcf8ef84 300 Gene3D G3DSA:3.30.420.40 133 270 1.5E-42 T 20-04-2016 APRE_RS04575 84f0f3f9ced8946c789f7ddfdcf8ef84 300 Pfam PF00480 ROK family 5 292 7.6E-74 T 20-04-2016 IPR000600 ROK family APRE_RS04575 84f0f3f9ced8946c789f7ddfdcf8ef84 300 SUPERFAMILY SSF53067 2 297 9.86E-61 T 20-04-2016 APRE_RS04575 84f0f3f9ced8946c789f7ddfdcf8ef84 300 PANTHER PTHR18964:SF123 1 297 1.8E-77 T 20-04-2016 APRE_RS04575 84f0f3f9ced8946c789f7ddfdcf8ef84 300 Gene3D G3DSA:3.30.420.40 1 132 7.3E-43 T 20-04-2016 APRE_RS01580 07a500aeb31452f4c940220ca592dbfd 345 Gene3D G3DSA:2.60.40.360 175 263 7.5E-6 T 20-04-2016 IPR008962 PapD-like APRE_RS01580 07a500aeb31452f4c940220ca592dbfd 345 PANTHER PTHR35902 43 273 1.3E-13 T 20-04-2016 APRE_RS01580 07a500aeb31452f4c940220ca592dbfd 345 PANTHER PTHR35902 292 345 1.3E-13 T 20-04-2016 APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 4 92 2.0E-21 T 20-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 Gene3D G3DSA:2.30.30.20 94 141 9.8E-17 T 20-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 SUPERFAMILY SSF57825 95 141 1.31E-12 T 20-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 PANTHER PTHR35805 1 142 3.7E-42 T 20-04-2016 APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 3 90 1.1E-25 T 20-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 Gene3D G3DSA:3.30.70.140 4 93 6.6E-28 T 20-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 PANTHER PTHR35805:SF1 1 142 3.7E-42 T 20-04-2016 APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 SUPERFAMILY SSF54893 2 93 1.14E-27 T 20-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APRE_RS04035 fe45b21241f9452dd2143e74e912afa4 142 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 141 2.0E-15 T 20-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 Pfam PF01371 Trp repressor protein 10 94 9.0E-31 T 20-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 Gene3D G3DSA:1.10.1270.10 2 103 2.2E-43 T 20-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 1.1E-41 T 20-04-2016 IPR013368 TrpR homologue YerC/YecD APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 SUPERFAMILY SSF48295 4 96 7.32E-30 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 PANTHER PTHR40080 1 102 2.9E-36 T 20-04-2016 APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 PIRSF PIRSF012508 1 100 6.9E-44 T 20-04-2016 IPR013368 TrpR homologue YerC/YecD APRE_RS05020 92ab92e534cec7432f2cd2e038d6da3a 106 PANTHER PTHR40080:SF1 1 102 2.9E-36 T 20-04-2016 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 PANTHER PTHR11592 1 157 2.1E-87 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 20-04-2016 IPR029760 Glutathione peroxidase conserved site APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 20-04-2016 IPR029759 Glutathione peroxidase active site APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 Gene3D G3DSA:3.40.30.10 3 157 4.4E-72 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.4E-18 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 PRINTS PR01011 Glutathione peroxidase family signature 121 130 1.4E-18 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.4E-18 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 Pfam PF00255 Glutathione peroxidase 4 111 2.5E-42 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 PIRSF PIRSF000303 1 158 3.0E-64 T 20-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APRE_RS01550 4a828b234023baf8f31dd42dd3110b58 158 SUPERFAMILY SSF52833 3 157 2.43E-60 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS07325 7897e300da05d7a734363726802e6773 459 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 440 2.1E-90 T 20-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APRE_RS07325 7897e300da05d7a734363726802e6773 459 PANTHER PTHR11119 14 459 1.6E-78 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS07325 7897e300da05d7a734363726802e6773 459 Pfam PF00860 Permease family 24 407 7.2E-77 T 20-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APRE_RS07325 7897e300da05d7a734363726802e6773 459 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 20-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APRE_RS04385 dc1fcc4e1e42b1343cac99c2b47f365b 410 PANTHER PTHR37829 31 209 2.7E-14 T 20-04-2016 APRE_RS04385 dc1fcc4e1e42b1343cac99c2b47f365b 410 Pfam PF04865 Baseplate J-like protein 93 341 2.2E-26 T 20-04-2016 IPR006949 Baseplate protein J-like APRE_RS02175 adef5669c7735e2614d049369078248b 189 Pfam PF12646 Domain of unknown function (DUF3783) 68 122 1.5E-15 T 20-04-2016 IPR016621 Uncharacterised conserved protein UCP014543 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 PRINTS PR00297 10kDa chaperonin signature 58 70 6.6E-26 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 PRINTS PR00297 10kDa chaperonin signature 25 46 6.6E-26 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 PRINTS PR00297 10kDa chaperonin signature 3 18 6.6E-26 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 PRINTS PR00297 10kDa chaperonin signature 79 92 6.6E-26 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 PANTHER PTHR10772 1 93 7.0E-34 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 SUPERFAMILY SSF50129 1 92 4.71E-28 T 20-04-2016 IPR011032 GroES-like APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 PANTHER PTHR10772:SF0 1 93 7.0E-34 T 20-04-2016 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 Gene3D G3DSA:2.30.33.40 2 93 2.5E-30 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 Pfam PF00166 Chaperonin 10 Kd subunit 3 92 9.4E-31 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 SMART SM00883 2 92 1.4E-39 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 20-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APRE_RS07705 6e6d8fe180d34385eee5ada44c54e7fa 93 Hamap MF_00580 10 kDa chaperonin [groS]. 2 93 21.955 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APRE_RS03320 52cae195a3e0c9dceb3d58afec048a93 333 Pfam PF01032 FecCD transport family 48 329 1.9E-41 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APRE_RS03320 52cae195a3e0c9dceb3d58afec048a93 333 PANTHER PTHR30472:SF19 6 333 9.3E-120 T 20-04-2016 APRE_RS03320 52cae195a3e0c9dceb3d58afec048a93 333 SUPERFAMILY SSF81345 10 329 1.28E-49 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS03320 52cae195a3e0c9dceb3d58afec048a93 333 Gene3D G3DSA:1.10.3470.10 18 331 1.1E-44 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APRE_RS03320 52cae195a3e0c9dceb3d58afec048a93 333 PANTHER PTHR30472 6 333 9.3E-120 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APRE_RS08640 159b5063d90504bb3f9104ee238660cc 354 PANTHER PTHR38682 1 354 9.0E-46 T 20-04-2016 APRE_RS08640 159b5063d90504bb3f9104ee238660cc 354 Pfam PF01992 ATP synthase (C/AC39) subunit 13 343 2.6E-48 T 20-04-2016 IPR002843 ATPase, V0 complex, c/d subunit APRE_RS08640 159b5063d90504bb3f9104ee238660cc 354 PANTHER PTHR38682:SF1 1 354 9.0E-46 T 20-04-2016 APRE_RS08640 159b5063d90504bb3f9104ee238660cc 354 SUPERFAMILY SSF103486 13 350 5.89E-50 T 20-04-2016 IPR002843 ATPase, V0 complex, c/d subunit APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 Pfam PF01259 SAICAR synthetase 3 214 1.1E-33 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 Gene3D G3DSA:3.30.200.20 3 101 4.0E-27 T 20-04-2016 APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 Gene3D G3DSA:3.30.470.20 102 215 1.7E-31 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 SUPERFAMILY SSF56104 1 217 8.17E-50 T 20-04-2016 APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 1 226 19.428 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 PANTHER PTHR11609:SF2 1 207 1.1E-45 T 20-04-2016 APRE_RS05625 baaca65b8211cc906a2711fb11cb639b 226 PANTHER PTHR11609 1 207 1.1E-45 T 20-04-2016 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 Gene3D G3DSA:3.10.290.10 1 54 6.9E-14 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 Pfam PF01479 S4 domain 1 44 5.0E-7 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 PANTHER PTHR21600 1 232 1.6E-59 T 20-04-2016 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 2.9E-36 T 20-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 PANTHER PTHR21600:SF19 1 232 1.6E-59 T 20-04-2016 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 SUPERFAMILY SSF55120 60 228 4.64E-35 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 SUPERFAMILY SSF55174 1 92 3.66E-14 T 20-04-2016 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 20-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APRE_RS07670 88f00e932d533474aa35e7950614a8db 232 Pfam PF00849 RNA pseudouridylate synthase 62 172 2.3E-14 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS05480 6a824cc8afcd9feec6ca2ae97ac69f2e 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.1E-11 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS05480 6a824cc8afcd9feec6ca2ae97ac69f2e 184 SUPERFAMILY SSF46689 8 67 2.43E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APRE_RS05480 6a824cc8afcd9feec6ca2ae97ac69f2e 184 Gene3D G3DSA:1.10.357.10 7 143 3.3E-19 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APRE_RS05480 6a824cc8afcd9feec6ca2ae97ac69f2e 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.66E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS05480 6a824cc8afcd9feec6ca2ae97ac69f2e 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.66E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APRE_RS06715 472f7157045751f34274ac403c6c60e6 215 PIRSF PIRSF006102 19 215 1.1E-68 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APRE_RS06715 472f7157045751f34274ac403c6c60e6 215 Pfam PF02508 Rnf-Nqr subunit, membrane protein 24 203 1.5E-63 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APRE_RS06715 472f7157045751f34274ac403c6c60e6 215 PANTHER PTHR30586 17 215 4.9E-84 T 20-04-2016 APRE_RS06715 472f7157045751f34274ac403c6c60e6 215 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 19 214 24.38 T 20-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APRE_RS00700 ebe93ebd076218545044d8381986d6c3 127 Pfam PF04205 FMN-binding domain 52 124 2.3E-17 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS00700 ebe93ebd076218545044d8381986d6c3 127 SMART SM00900 52 126 1.4E-15 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS01475 eca06b110e9d2d469b401c2b1fd33224 231 Gene3D G3DSA:3.10.129.10 140 225 1.0E-11 T 20-04-2016 IPR029069 HotDog domain APRE_RS01475 eca06b110e9d2d469b401c2b1fd33224 231 Gene3D G3DSA:3.10.129.10 2 130 1.0E-20 T 20-04-2016 IPR029069 HotDog domain APRE_RS01475 eca06b110e9d2d469b401c2b1fd33224 231 Pfam PF01643 Acyl-ACP thioesterase 2 209 1.5E-37 T 20-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 APRE_RS01475 eca06b110e9d2d469b401c2b1fd33224 231 SUPERFAMILY SSF54637 1 129 2.26E-26 T 20-04-2016 IPR029069 HotDog domain APRE_RS01475 eca06b110e9d2d469b401c2b1fd33224 231 SUPERFAMILY SSF54637 136 227 1.68E-12 T 20-04-2016 IPR029069 HotDog domain APRE_RS00870 31d03d7a593d7a6e8e225a3dcd331a08 227 PANTHER PTHR24220:SF530 3 223 7.7E-65 T 20-04-2016 APRE_RS00870 31d03d7a593d7a6e8e225a3dcd331a08 227 PANTHER PTHR24220 3 223 7.7E-65 T 20-04-2016 APRE_RS00870 31d03d7a593d7a6e8e225a3dcd331a08 227 SUPERFAMILY SSF52540 2 217 1.33E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS00870 31d03d7a593d7a6e8e225a3dcd331a08 227 SMART SM00382 26 201 2.4E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS00870 31d03d7a593d7a6e8e225a3dcd331a08 227 Pfam PF00005 ABC transporter 17 152 6.3E-23 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS00870 31d03d7a593d7a6e8e225a3dcd331a08 227 Gene3D G3DSA:3.40.50.300 1 218 9.9E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05490 f5bdf9cd5d6cdbbe4c42f055d4e4dda4 812 Pfam PF13091 PLD-like domain 64 187 8.9E-8 T 20-04-2016 IPR025202 Phospholipase D-like domain APRE_RS05490 f5bdf9cd5d6cdbbe4c42f055d4e4dda4 812 SUPERFAMILY SSF52540 358 572 6.79E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS05490 f5bdf9cd5d6cdbbe4c42f055d4e4dda4 812 Gene3D G3DSA:3.40.50.300 413 545 3.6E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02215 e91ffa020df47726b4aa08f0be9faf54 507 Gene3D G3DSA:3.20.20.80 8 498 9.2E-170 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APRE_RS02215 e91ffa020df47726b4aa08f0be9faf54 507 PANTHER PTHR32438 2 500 1.7E-126 T 20-04-2016 APRE_RS02215 e91ffa020df47726b4aa08f0be9faf54 507 PANTHER PTHR32438:SF5 2 500 1.7E-126 T 20-04-2016 APRE_RS02215 e91ffa020df47726b4aa08f0be9faf54 507 SUPERFAMILY SSF51445 9 499 1.08E-160 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS02215 e91ffa020df47726b4aa08f0be9faf54 507 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 8 498 7.0E-97 T 20-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APRE_RS02215 e91ffa020df47726b4aa08f0be9faf54 507 Pfam PF02446 4-alpha-glucanotransferase 15 475 8.3E-154 T 20-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APRE_RS05485 2d6495c82f45173a2266b998282fc282 224 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 23 207 2.0E-29 T 20-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 APRE_RS05485 2d6495c82f45173a2266b998282fc282 224 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 23 186 7.0E-22 T 20-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 APRE_RS03190 98ca3fd20fc2c84eda3d30f65da607de 88 Gene3D G3DSA:3.30.1230.10 2 85 1.0E-32 T 20-04-2016 IPR007393 Domain of unknown function DUF448 APRE_RS03190 98ca3fd20fc2c84eda3d30f65da607de 88 Pfam PF04296 Protein of unknown function (DUF448) 10 83 1.1E-29 T 20-04-2016 IPR007393 Domain of unknown function DUF448 APRE_RS03190 98ca3fd20fc2c84eda3d30f65da607de 88 PANTHER PTHR34215 3 85 5.3E-27 T 20-04-2016 APRE_RS03190 98ca3fd20fc2c84eda3d30f65da607de 88 PANTHER PTHR34215:SF1 3 85 5.3E-27 T 20-04-2016 APRE_RS03190 98ca3fd20fc2c84eda3d30f65da607de 88 SUPERFAMILY SSF64376 5 85 3.27E-27 T 20-04-2016 IPR007393 Domain of unknown function DUF448 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 1.4E-115 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 210 225 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 180 198 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 157 176 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PRINTS PR01469 Bacterial carbamate kinase signature 265 280 2.2E-61 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 SUPERFAMILY SSF53633 3 309 6.02E-80 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 Gene3D G3DSA:3.40.1160.10 2 309 8.3E-107 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 Pfam PF00696 Amino acid kinase family 3 292 1.3E-30 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PANTHER PTHR30409 1 310 2.6E-147 T 20-04-2016 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PANTHER PTHR30409:SF1 1 310 2.6E-147 T 20-04-2016 APRE_RS07340 a1a60f4de78d801585d297379c11066c 310 PIRSF PIRSF000723 1 310 5.1E-126 T 20-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 SUPERFAMILY SSF52540 429 498 1.06E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 SUPERFAMILY SSF52540 301 355 1.06E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 SUPERFAMILY SSF52540 6 264 1.06E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 SUPERFAMILY SSF52540 542 612 1.06E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Pfam PF13538 UvrD-like helicase C-terminal domain 547 606 1.1E-6 T 20-04-2016 IPR027785 UvrD-like helicase C-terminal domain APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Gene3D G3DSA:3.40.50.300 7 214 2.9E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Pfam PF00580 UvrD/REP helicase N-terminal domain 143 220 5.1E-8 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 133 5.4E-11 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 PANTHER PTHR11070 339 499 1.0E-15 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 PANTHER PTHR11070 523 612 1.0E-15 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 PANTHER PTHR11070 20 280 1.0E-15 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Gene3D G3DSA:3.40.50.300 297 342 1.4E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Gene3D G3DSA:3.40.50.300 531 611 1.4E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03555 8f5962b43394f84fe2c8f2d1cebcaa3e 634 Gene3D G3DSA:3.40.50.300 215 260 1.4E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 294 313 1.19E-5 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 1.19E-5 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 PANTHER PTHR11616 2 430 2.7E-124 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 Pfam PF00209 Sodium:neurotransmitter symporter family 2 124 8.9E-12 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 Pfam PF00209 Sodium:neurotransmitter symporter family 140 428 3.7E-19 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 PANTHER PTHR11616:SF154 2 430 2.7E-124 T 20-04-2016 APRE_RS06330 68992bc84512103d5dbe132607fa9010 430 SUPERFAMILY SSF161070 3 429 5.49E-94 T 20-04-2016 APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 496 4.2E-78 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PANTHER PTHR11206 210 450 7.8E-29 T 20-04-2016 APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PANTHER PTHR11206:SF90 210 450 7.8E-29 T 20-04-2016 APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PIRSF PIRSF002869 1 501 5.8E-92 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 Pfam PF03023 MviN-like protein 26 457 3.1E-64 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PRINTS PR01806 Virulence factor MviN signature 403 420 2.3E-15 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PRINTS PR01806 Virulence factor MviN signature 351 370 2.3E-15 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PRINTS PR01806 Virulence factor MviN signature 31 50 2.3E-15 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PRINTS PR01806 Virulence factor MviN signature 128 152 2.3E-15 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PRINTS PR01806 Virulence factor MviN signature 253 279 2.3E-15 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06460 38375e956770d87995c1f81b6c3b768a 506 PRINTS PR01806 Virulence factor MviN signature 152 173 2.3E-15 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS06615 f1cbee81397a8360875ef2e9964884cd 107 Hamap MF_00245 UPF0122 protein . 1 104 16.983 T 20-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like APRE_RS06615 f1cbee81397a8360875ef2e9964884cd 107 Gene3D G3DSA:1.10.10.10 1 99 6.3E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06615 f1cbee81397a8360875ef2e9964884cd 107 SUPERFAMILY SSF88659 1 93 2.43E-24 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS06615 f1cbee81397a8360875ef2e9964884cd 107 PANTHER PTHR40083 1 107 2.0E-20 T 20-04-2016 APRE_RS06615 f1cbee81397a8360875ef2e9964884cd 107 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 1 92 4.4E-25 T 20-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 PANTHER PTHR33175 1 91 4.8E-39 T 20-04-2016 APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.6E-32 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 SMART SM00411 1 91 4.3E-40 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 Gene3D G3DSA:4.10.520.10 1 92 1.1E-36 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 SUPERFAMILY SSF47729 1 91 2.94E-30 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.8E-11 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APRE_RS04925 d0b15cec2bffc4e1fa855b411a8b9d73 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-11 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APRE_RS06000 53ac624608ce8a791181b3b7d80ccc1b 95 Gene3D G3DSA:2.60.120.10 15 91 9.8E-17 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APRE_RS06000 53ac624608ce8a791181b3b7d80ccc1b 95 SUPERFAMILY SSF51182 10 91 5.13E-14 T 20-04-2016 IPR011051 RmlC-like cupin domain APRE_RS06000 53ac624608ce8a791181b3b7d80ccc1b 95 Pfam PF02311 AraC-like ligand binding domain 25 85 1.5E-6 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APRE_RS01935 76629c7f1532cedb644c010e1ff2f354 346 PANTHER PTHR10361:SF31 7 344 5.5E-124 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APRE_RS01935 76629c7f1532cedb644c010e1ff2f354 346 PIRSF PIRSF005508 1 346 3.8E-124 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APRE_RS01935 76629c7f1532cedb644c010e1ff2f354 346 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 7 337 1.4E-110 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APRE_RS01935 76629c7f1532cedb644c010e1ff2f354 346 PANTHER PTHR10361 7 344 5.5E-124 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APRE_RS01935 76629c7f1532cedb644c010e1ff2f354 346 Pfam PF01758 Sodium Bile acid symporter family 52 249 1.0E-44 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APRE_RS07265 a5fbfb2c51b58eb5bbbdfd45d8bb01ac 374 Pfam PF13349 Putative adhesin 156 299 8.3E-16 T 20-04-2016 IPR025164 Putative adhesin APRE_RS03045 0eec92f0ffac648c9c9e2831265df7d5 248 PRINTS PR01656 Helicobacter pylori vacuolating cytotoxin signature 3 21 2.8E-5 T 20-04-2016 IPR003842 Vacuolating cytotoxin GO:0005576|GO:0009405 APRE_RS03045 0eec92f0ffac648c9c9e2831265df7d5 248 PRINTS PR01656 Helicobacter pylori vacuolating cytotoxin signature 37 63 2.8E-5 T 20-04-2016 IPR003842 Vacuolating cytotoxin GO:0005576|GO:0009405 APRE_RS03045 0eec92f0ffac648c9c9e2831265df7d5 248 Pfam PF12822 Protein of unknown function (DUF3816) 9 134 7.9E-23 T 20-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 APRE_RS05515 a87f2662e48133157e5656a02b7b14c1 199 SUPERFAMILY SSF101473 4 192 2.22E-57 T 20-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APRE_RS05515 a87f2662e48133157e5656a02b7b14c1 199 PANTHER PTHR28629 1 199 1.9E-76 T 20-04-2016 APRE_RS05515 a87f2662e48133157e5656a02b7b14c1 199 Pfam PF02734 DAK2 domain 31 192 7.4E-57 T 20-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APRE_RS05515 a87f2662e48133157e5656a02b7b14c1 199 SMART SM01120 30 195 2.5E-73 T 20-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APRE_RS05515 a87f2662e48133157e5656a02b7b14c1 199 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 192 6.3E-72 T 20-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- APRE_RS06350 9788112970d1049573c7a990a74a5b10 179 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 93 8.1E-17 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APRE_RS06350 9788112970d1049573c7a990a74a5b10 179 PANTHER PTHR33231 1 177 7.4E-34 T 20-04-2016 APRE_RS06350 9788112970d1049573c7a990a74a5b10 179 Gene3D G3DSA:3.30.160.100 1 94 8.8E-21 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APRE_RS06350 9788112970d1049573c7a990a74a5b10 179 SUPERFAMILY SSF69754 1 99 6.02E-21 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APRE_RS06350 9788112970d1049573c7a990a74a5b10 179 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.6E-14 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APRE_RS06350 9788112970d1049573c7a990a74a5b10 179 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 121 172 5.1E-23 T 20-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal APRE_RS08150 05c65cd4919a8d38412d1cb3562e5764 312 Pfam PF03812 2-keto-3-deoxygluconate permease 3 306 5.7E-101 T 20-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APRE_RS08150 05c65cd4919a8d38412d1cb3562e5764 312 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 291 8.0E-38 T 20-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APRE_RS05720 aadf2cee88dd83a5de48dc4f12df5a5c 128 Pfam PF02915 Rubrerythrin 9 114 2.9E-7 T 20-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 APRE_RS05720 aadf2cee88dd83a5de48dc4f12df5a5c 128 Gene3D G3DSA:1.20.1260.10 7 59 1.6E-8 T 20-04-2016 IPR012347 Ferritin-related APRE_RS05720 aadf2cee88dd83a5de48dc4f12df5a5c 128 SUPERFAMILY SSF47240 3 127 1.27E-13 T 20-04-2016 IPR009078 Ferritin-like superfamily APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 Gene3D G3DSA:3.90.1180.10 8 144 3.0E-60 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 SUPERFAMILY SSF52161 8 145 3.66E-57 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 PIRSF PIRSF002181 1 145 6.4E-50 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 PANTHER PTHR11545 1 145 3.8E-67 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 18 144 27.992 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 144 9.0E-60 T 20-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APRE_RS07165 cf663e3fa9365bfc1fac6d750ae352ed 146 Pfam PF00572 Ribosomal protein L13 17 140 7.0E-55 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APRE_RS06740 1c6d6615a5e1baa2ce8b67b69e2b4109 200 Gene3D G3DSA:3.40.50.300 3 193 1.5E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06740 1c6d6615a5e1baa2ce8b67b69e2b4109 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 197 20.42 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APRE_RS06740 1c6d6615a5e1baa2ce8b67b69e2b4109 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 189 8.0E-40 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APRE_RS06740 1c6d6615a5e1baa2ce8b67b69e2b4109 200 Pfam PF01121 Dephospho-CoA kinase 6 180 2.3E-33 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APRE_RS06740 1c6d6615a5e1baa2ce8b67b69e2b4109 200 SUPERFAMILY SSF52540 4 193 4.0E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06740 1c6d6615a5e1baa2ce8b67b69e2b4109 200 PANTHER PTHR10695 6 193 3.9E-35 T 20-04-2016 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 Pfam PF00410 Ribosomal protein S8 4 131 5.7E-51 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 SUPERFAMILY SSF56047 1 131 2.09E-48 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 PANTHER PTHR11758 1 131 2.2E-62 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 Gene3D G3DSA:3.30.1490.10 75 131 1.0E-28 T 20-04-2016 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 Gene3D G3DSA:3.30.1370.30 1 72 1.5E-29 T 20-04-2016 APRE_RS08000 91b3c659e48456cc87f8e3c5ac47346a 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 32.843 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APRE_RS04275 1e45f0ba2cc6e28d5df68af08d5680ea 261 Gene3D G3DSA:3.30.300.10 5 97 9.6E-16 T 20-04-2016 APRE_RS04275 1e45f0ba2cc6e28d5df68af08d5680ea 261 Gene3D G3DSA:3.30.300.10 160 198 9.6E-16 T 20-04-2016 APRE_RS04275 1e45f0ba2cc6e28d5df68af08d5680ea 261 SUPERFAMILY SSF55973 2 67 2.83E-14 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS04275 1e45f0ba2cc6e28d5df68af08d5680ea 261 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 66 6.7E-8 T 20-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 SUPERFAMILY SSF101821 71 182 8.85E-26 T 20-04-2016 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 Pfam PF05343 M42 glutamyl aminopeptidase 47 332 6.8E-71 T 20-04-2016 IPR008007 Peptidase M42 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 Gene3D G3DSA:3.40.630.10 4 70 7.5E-52 T 20-04-2016 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 Gene3D G3DSA:3.40.630.10 167 339 7.5E-52 T 20-04-2016 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 SUPERFAMILY SSF53187 6 76 1.72E-47 T 20-04-2016 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 SUPERFAMILY SSF53187 170 339 1.72E-47 T 20-04-2016 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 PIRSF PIRSF001123 4 315 2.7E-38 T 20-04-2016 IPR008007 Peptidase M42 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 Gene3D G3DSA:2.40.30.40 71 166 1.9E-29 T 20-04-2016 IPR023367 Peptidase M42, domain 2 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 PANTHER PTHR32481:SF7 1 339 1.1E-133 T 20-04-2016 APRE_RS00560 3a31dbfaeb65694e7d95bbc9237f537d 340 PANTHER PTHR32481 1 339 1.1E-133 T 20-04-2016 APRE_RS01310 1e211d8fe4f28ccb449c6bff1e2b20c3 183 Gene3D G3DSA:1.10.340.30 3 180 1.7E-63 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APRE_RS01310 1e211d8fe4f28ccb449c6bff1e2b20c3 183 PANTHER PTHR30037 1 182 6.7E-72 T 20-04-2016 APRE_RS01310 1e211d8fe4f28ccb449c6bff1e2b20c3 183 SUPERFAMILY SSF48150 3 182 3.14E-58 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APRE_RS01310 1e211d8fe4f28ccb449c6bff1e2b20c3 183 Pfam PF03352 Methyladenine glycosylase 10 179 5.9E-64 T 20-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APRE_RS01310 1e211d8fe4f28ccb449c6bff1e2b20c3 183 PANTHER PTHR30037:SF4 1 182 6.7E-72 T 20-04-2016 APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 Pfam PF07724 AAA domain (Cdc48 subfamily) 156 274 7.9E-15 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 SUPERFAMILY SSF52540 112 357 1.63E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 Gene3D G3DSA:3.40.50.300 126 290 8.9E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 PANTHER PTHR11638 210 314 2.7E-14 T 20-04-2016 APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 PANTHER PTHR11638 150 186 2.7E-14 T 20-04-2016 APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 SMART SM00382 154 295 1.3E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 255 269 5.2E-7 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS01910 d06b832d0e69502dd7e33c126a1b7344 364 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 158 176 5.2E-7 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APRE_RS08860 05946b451b1177f573619af1b103560d 245 Pfam PF02096 60Kd inner membrane protein 33 227 4.2E-43 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APRE_RS08860 05946b451b1177f573619af1b103560d 245 PANTHER PTHR12428:SF14 4 227 5.3E-39 T 20-04-2016 APRE_RS08860 05946b451b1177f573619af1b103560d 245 PANTHER PTHR12428 4 227 5.3E-39 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APRE_RS08860 05946b451b1177f573619af1b103560d 245 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 33 228 1.2E-40 T 20-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APRE_RS00055 65d0c8ce5de13db86f1aa01452969d0f 99 SUPERFAMILY SSF51182 33 97 1.41E-11 T 20-04-2016 IPR011051 RmlC-like cupin domain APRE_RS00055 65d0c8ce5de13db86f1aa01452969d0f 99 Gene3D G3DSA:2.60.120.10 16 98 1.7E-18 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APRE_RS00055 65d0c8ce5de13db86f1aa01452969d0f 99 Pfam PF07883 Cupin domain 46 93 6.8E-7 T 20-04-2016 IPR013096 Cupin 2, conserved barrel APRE_RS06270 ecdfbd7cc5b7e04bd552a042d02b67f5 335 Gene3D G3DSA:3.40.50.1820 66 334 2.3E-45 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS06270 ecdfbd7cc5b7e04bd552a042d02b67f5 335 PANTHER PTHR11614 62 331 6.9E-35 T 20-04-2016 APRE_RS06270 ecdfbd7cc5b7e04bd552a042d02b67f5 335 PANTHER PTHR11614:SF87 62 331 6.9E-35 T 20-04-2016 APRE_RS06270 ecdfbd7cc5b7e04bd552a042d02b67f5 335 SUPERFAMILY SSF53474 31 182 1.32E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS06270 ecdfbd7cc5b7e04bd552a042d02b67f5 335 SUPERFAMILY SSF53474 260 334 1.32E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS06270 ecdfbd7cc5b7e04bd552a042d02b67f5 335 Pfam PF12146 Serine aminopeptidase, S33 68 321 4.8E-44 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 PANTHER PTHR11067 1 189 4.3E-64 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 PANTHER PTHR11067:SF9 1 189 4.3E-64 T 20-04-2016 APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 189 3.9E-56 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 Gene3D G3DSA:3.90.950.10 1 191 3.0E-64 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 191 42.346 T 20-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 SUPERFAMILY SSF52972 1 190 3.4E-59 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APRE_RS04595 a040a46ce6e84f279f4baaa1631f1950 192 Pfam PF01725 Ham1 family 3 187 8.1E-50 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APRE_RS00800 5325626f3c638d29d7df49424a8a5a19 158 PANTHER PTHR33799 1 157 4.4E-25 T 20-04-2016 APRE_RS00800 5325626f3c638d29d7df49424a8a5a19 158 SUPERFAMILY SSF52728 4 157 3.27E-34 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS00800 5325626f3c638d29d7df49424a8a5a19 158 Pfam PF03830 PTS system sorbose subfamily IIB component 4 146 1.1E-35 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS00800 5325626f3c638d29d7df49424a8a5a19 158 Gene3D G3DSA:3.40.35.10 3 157 4.0E-39 T 20-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APRE_RS05545 a938f6b6e7ea470ce738a4c75417b002 164 PANTHER PTHR10371 29 163 2.4E-48 T 20-04-2016 APRE_RS05545 a938f6b6e7ea470ce738a4c75417b002 164 Gene3D G3DSA:3.40.30.10 79 159 5.4E-12 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS05545 a938f6b6e7ea470ce738a4c75417b002 164 PIRSF PIRSF000216 2 164 6.2E-49 T 20-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APRE_RS05545 a938f6b6e7ea470ce738a4c75417b002 164 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 159 7.4E-45 T 20-04-2016 APRE_RS05545 a938f6b6e7ea470ce738a4c75417b002 164 SUPERFAMILY SSF52833 9 161 3.47E-44 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 20-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.6E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.6E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.6E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 Gene3D G3DSA:3.30.70.600 3 102 1.5E-41 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.4E-34 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 SUPERFAMILY SSF54999 5 102 1.57E-36 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 SMART SM01403 7 101 1.4E-56 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 PANTHER PTHR11700 1 102 2.4E-46 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.413 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APRE_RS08075 dab165e1b7d4e5eaa1f28b535cfe5cb0 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.0E-44 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APRE_RS01760 94e09e26b88a4cfd15be240a7c0a0eb4 642 Gene3D G3DSA:1.20.5.420 387 445 5.2E-5 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 SUPERFAMILY SSF53807 58 335 1.06E-50 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 Pfam PF01497 Periplasmic binding protein 78 328 2.8E-35 T 20-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 PANTHER PTHR30532:SF4 51 347 3.0E-92 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 PANTHER PTHR30532:SF4 1 30 3.0E-92 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 PANTHER PTHR30532 51 347 3.0E-92 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 PANTHER PTHR30532 1 30 3.0E-92 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 Gene3D G3DSA:3.40.50.1980 58 193 6.1E-24 T 20-04-2016 APRE_RS03310 4762f17335552818109a56ff29cda58c 353 Gene3D G3DSA:3.40.50.1980 195 349 3.1E-27 T 20-04-2016 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 Gene3D G3DSA:3.30.930.10 4 193 4.3E-89 T 20-04-2016 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 Gene3D G3DSA:3.30.930.10 243 336 4.3E-89 T 20-04-2016 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 SUPERFAMILY SSF55681 7 338 7.85E-72 T 20-04-2016 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 Pfam PF13393 Histidyl-tRNA synthetase 11 326 1.2E-38 T 20-04-2016 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 PIRSF PIRSF001549 2 428 1.2E-122 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 PANTHER PTHR11476 1 428 1.6E-148 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 427 26.562 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 Pfam PF03129 Anticodon binding domain 346 428 1.5E-14 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 Gene3D G3DSA:3.40.50.800 343 428 1.5E-24 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 SUPERFAMILY SSF52954 344 428 1.18E-21 T 20-04-2016 IPR004154 Anticodon-binding APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 PANTHER PTHR11476:SF1 1 428 1.6E-148 T 20-04-2016 APRE_RS06985 6daf3086d764f82b30700f5ad3eff469 428 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 8 422 1.6E-116 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APRE_RS02280 edc7e78eb6bc1c5a2e3003d957f2976d 250 Gene3D G3DSA:3.40.1190.20 1 235 6.7E-38 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS02280 edc7e78eb6bc1c5a2e3003d957f2976d 250 PANTHER PTHR10534:SF0 1 241 9.4E-24 T 20-04-2016 APRE_RS02280 edc7e78eb6bc1c5a2e3003d957f2976d 250 Pfam PF08543 Phosphomethylpyrimidine kinase 35 230 3.0E-7 T 20-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APRE_RS02280 edc7e78eb6bc1c5a2e3003d957f2976d 250 PANTHER PTHR10534 1 241 9.4E-24 T 20-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APRE_RS02280 edc7e78eb6bc1c5a2e3003d957f2976d 250 SUPERFAMILY SSF53613 1 227 3.27E-32 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS01205 6d53a4cb8ae4c7d810143842ff82d5d4 296 Gene3D G3DSA:1.25.40.10 166 242 3.0E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS01205 6d53a4cb8ae4c7d810143842ff82d5d4 296 SUPERFAMILY SSF48452 162 244 9.48E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APRE_RS01205 6d53a4cb8ae4c7d810143842ff82d5d4 296 Gene3D G3DSA:1.10.260.40 8 63 1.6E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS01205 6d53a4cb8ae4c7d810143842ff82d5d4 296 SUPERFAMILY SSF47413 2 65 5.35E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS01205 6d53a4cb8ae4c7d810143842ff82d5d4 296 SMART SM00530 11 66 5.1E-8 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS01205 6d53a4cb8ae4c7d810143842ff82d5d4 296 Pfam PF01381 Helix-turn-helix 12 64 7.0E-9 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS07385 5c4784527ab87e629f60b49ad82c3e50 146 PANTHER PTHR36930 2 140 9.4E-35 T 20-04-2016 APRE_RS07385 5c4784527ab87e629f60b49ad82c3e50 146 Gene3D G3DSA:2.40.33.20 5 140 3.1E-28 T 20-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like APRE_RS07385 5c4784527ab87e629f60b49ad82c3e50 146 PANTHER PTHR36930:SF1 2 140 9.4E-35 T 20-04-2016 APRE_RS07385 5c4784527ab87e629f60b49ad82c3e50 146 SUPERFAMILY SSF50800 1 141 2.62E-38 T 20-04-2016 IPR011037 Pyruvate kinase-like, insert domain APRE_RS02395 da50890f5e57bbf20e70581a1be27851 446 PIRSF PIRSF006603 1 444 2.5E-98 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02395 da50890f5e57bbf20e70581a1be27851 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 415 1.7E-61 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02395 da50890f5e57bbf20e70581a1be27851 446 PANTHER PTHR11206:SF107 5 439 2.0E-121 T 20-04-2016 APRE_RS02395 da50890f5e57bbf20e70581a1be27851 446 Pfam PF01554 MatE 20 179 2.1E-33 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02395 da50890f5e57bbf20e70581a1be27851 446 Pfam PF01554 MatE 241 402 6.0E-24 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS02395 da50890f5e57bbf20e70581a1be27851 446 PANTHER PTHR11206 5 439 2.0E-121 T 20-04-2016 APRE_RS02335 c26bca5ee26979a840f59b1bd481f851 89 Hamap MF_01054 UPF0237 protein . 1 89 23.132 T 20-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type APRE_RS02335 c26bca5ee26979a840f59b1bd481f851 89 Gene3D G3DSA:3.30.70.260 1 89 1.0E-28 T 20-04-2016 APRE_RS02335 c26bca5ee26979a840f59b1bd481f851 89 Pfam PF13740 ACT domain 4 77 1.1E-13 T 20-04-2016 APRE_RS02335 c26bca5ee26979a840f59b1bd481f851 89 SUPERFAMILY SSF55021 1 83 2.03E-19 T 20-04-2016 APRE_RS02335 c26bca5ee26979a840f59b1bd481f851 89 PANTHER PTHR34875 1 89 4.5E-18 T 20-04-2016 APRE_RS06720 a38fa6d1a50eaaff21032544ba4d92cf 181 SMART SM00900 89 177 4.5E-7 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS06720 a38fa6d1a50eaaff21032544ba4d92cf 181 PANTHER PTHR36118:SF1 1 174 9.0E-22 T 20-04-2016 APRE_RS06720 a38fa6d1a50eaaff21032544ba4d92cf 181 PIRSF PIRSF006091 1 180 1.3E-26 T 20-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APRE_RS06720 a38fa6d1a50eaaff21032544ba4d92cf 181 PANTHER PTHR36118 1 174 9.0E-22 T 20-04-2016 APRE_RS06720 a38fa6d1a50eaaff21032544ba4d92cf 181 Pfam PF04205 FMN-binding domain 89 174 3.2E-12 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APRE_RS00885 c27e054f97f898b21e62829fba22071e 159 SMART SM01058 1 111 3.0E-31 T 20-04-2016 IPR003711 CarD-like/TRCF domain APRE_RS00885 c27e054f97f898b21e62829fba22071e 159 Pfam PF02559 CarD-like/TRCF domain 2 109 3.7E-16 T 20-04-2016 IPR003711 CarD-like/TRCF domain APRE_RS00885 c27e054f97f898b21e62829fba22071e 159 PANTHER PTHR38447 1 157 1.8E-41 T 20-04-2016 APRE_RS00885 c27e054f97f898b21e62829fba22071e 159 SUPERFAMILY SSF141259 1 64 1.83E-13 T 20-04-2016 IPR003711 CarD-like/TRCF domain APRE_RS07665 ba21f3324ce8eff893c964d113a7917b 200 PANTHER PTHR30576 1 194 7.9E-77 T 20-04-2016 APRE_RS07665 ba21f3324ce8eff893c964d113a7917b 200 Pfam PF02397 Bacterial sugar transferase 7 186 6.7E-55 T 20-04-2016 IPR003362 Bacterial sugar transferase APRE_RS00065 ab723afd49af06e6bd075770b10ca6f5 589 Gene3D G3DSA:2.10.270.10 363 421 6.1E-7 T 20-04-2016 APRE_RS00065 ab723afd49af06e6bd075770b10ca6f5 589 Gene3D G3DSA:2.10.270.10 169 247 1.1E-12 T 20-04-2016 APRE_RS00065 ab723afd49af06e6bd075770b10ca6f5 589 Gene3D G3DSA:2.10.270.10 248 359 1.2E-16 T 20-04-2016 APRE_RS00065 ab723afd49af06e6bd075770b10ca6f5 589 Pfam PF05382 Bacteriophage peptidoglycan hydrolase 436 581 8.8E-30 T 20-04-2016 IPR008044 Bacteriophage lysin APRE_RS00065 ab723afd49af06e6bd075770b10ca6f5 589 SUPERFAMILY SSF69360 364 422 6.08E-6 T 20-04-2016 APRE_RS00065 ab723afd49af06e6bd075770b10ca6f5 589 SUPERFAMILY SSF69360 172 360 1.1E-29 T 20-04-2016 APRE_RS04700 70cd80459f697b8e5ce638fbedc944a9 194 PANTHER PTHR35798 15 192 4.9E-15 T 20-04-2016 APRE_RS04700 70cd80459f697b8e5ce638fbedc944a9 194 Pfam PF04472 Protein of unknown function (DUF552) 108 178 7.4E-21 T 20-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 APRE_RS04700 70cd80459f697b8e5ce638fbedc944a9 194 PANTHER PTHR35798:SF1 15 192 4.9E-15 T 20-04-2016 APRE_RS04700 70cd80459f697b8e5ce638fbedc944a9 194 Hamap MF_01197 Cell division protein SepF [sepF]. 9 186 14.45 T 20-04-2016 IPR023052 Cell division protein SepF GO:0090529 APRE_RS05730 5e855d4203f896fed4045c62a1886f8a 266 PANTHER PTHR21600:SF3 28 258 4.8E-55 T 20-04-2016 APRE_RS05730 5e855d4203f896fed4045c62a1886f8a 266 Pfam PF04468 PSP1 C-terminal conserved region 59 143 6.7E-31 T 20-04-2016 IPR007557 PSP1, C-terminal APRE_RS05730 5e855d4203f896fed4045c62a1886f8a 266 PANTHER PTHR21600 28 258 4.8E-55 T 20-04-2016 APRE_RS05185 899cdb47bd478e1bd3534b23286141b6 458 PANTHER PTHR11629 105 205 1.6E-15 T 20-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 APRE_RS05185 899cdb47bd478e1bd3534b23286141b6 458 Pfam PF01496 V-type ATPase 116kDa subunit family 354 455 4.9E-7 T 20-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 APRE_RS05185 899cdb47bd478e1bd3534b23286141b6 458 Pfam PF01496 V-type ATPase 116kDa subunit family 13 208 1.3E-22 T 20-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 PANTHER PTHR38445 1 125 6.6E-22 T 20-04-2016 APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 Gene3D G3DSA:1.10.10.10 4 74 7.5E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 SUPERFAMILY SSF46785 6 80 3.67E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 SMART SM00345 17 76 5.4E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 PANTHER PTHR38445:SF2 1 125 6.6E-22 T 20-04-2016 APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 6.7E-5 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 6.7E-5 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS01260 1c0dade55f122f0dc6ad7fce5eb8bd71 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 2.2E-13 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APRE_RS04665 49fcf8ff8c1387b2b9a7e629060b992c 200 Pfam PF00753 Metallo-beta-lactamase superfamily 9 183 3.3E-23 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04665 49fcf8ff8c1387b2b9a7e629060b992c 200 Gene3D G3DSA:3.60.15.10 4 199 4.2E-45 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04665 49fcf8ff8c1387b2b9a7e629060b992c 200 PANTHER PTHR11935:SF8 1 199 1.4E-47 T 20-04-2016 APRE_RS04665 49fcf8ff8c1387b2b9a7e629060b992c 200 PANTHER PTHR11935 1 199 1.4E-47 T 20-04-2016 APRE_RS04665 49fcf8ff8c1387b2b9a7e629060b992c 200 SUPERFAMILY SSF56281 7 200 2.23E-43 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS04665 49fcf8ff8c1387b2b9a7e629060b992c 200 SMART SM00849 12 183 2.4E-31 T 20-04-2016 IPR001279 Metallo-beta-lactamase APRE_RS01750 0aade01ae5bca1ad8d3cd02e7a49ff10 274 PANTHER PTHR10992 33 273 3.4E-16 T 20-04-2016 APRE_RS01750 0aade01ae5bca1ad8d3cd02e7a49ff10 274 Pfam PF12146 Serine aminopeptidase, S33 33 257 2.1E-15 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APRE_RS01750 0aade01ae5bca1ad8d3cd02e7a49ff10 274 SUPERFAMILY SSF53474 8 273 2.04E-40 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS01750 0aade01ae5bca1ad8d3cd02e7a49ff10 274 Gene3D G3DSA:3.40.50.1820 205 273 1.3E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS01750 0aade01ae5bca1ad8d3cd02e7a49ff10 274 Gene3D G3DSA:3.40.50.1820 7 143 1.3E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS03550 bff91243934a89db57c9fcb52ba5a41f 696 Gene3D G3DSA:3.40.50.300 236 424 3.4E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03550 bff91243934a89db57c9fcb52ba5a41f 696 Gene3D G3DSA:3.40.50.300 1 139 3.4E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03550 bff91243934a89db57c9fcb52ba5a41f 696 SUPERFAMILY SSF52540 1 101 2.08E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03550 bff91243934a89db57c9fcb52ba5a41f 696 SUPERFAMILY SSF52540 218 254 2.08E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03550 bff91243934a89db57c9fcb52ba5a41f 696 SUPERFAMILY SSF52540 306 422 2.08E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03550 bff91243934a89db57c9fcb52ba5a41f 696 Pfam PF13175 AAA ATPase domain 1 403 5.9E-65 T 20-04-2016 APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 280 436 1.3E-53 T 20-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 Gene3D G3DSA:3.40.1080.10 7 186 2.9E-49 T 20-04-2016 APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 Gene3D G3DSA:3.40.810.20 198 442 1.9E-39 T 20-04-2016 APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 SUPERFAMILY SSF100950 5 228 2.71E-31 T 20-04-2016 APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 SUPERFAMILY SSF100950 193 444 8.98E-54 T 20-04-2016 APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 5 184 5.2E-15 T 20-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 APRE_RS06920 b38031508334c4c2184d6db38cd5cb48 447 PANTHER PTHR21432 7 442 6.4E-107 T 20-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 Gene3D G3DSA:3.40.50.300 3 217 7.5E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 SUPERFAMILY SSF52540 4 218 3.33E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 PANTHER PTHR24220:SF577 5 233 7.5E-102 T 20-04-2016 APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 SMART SM00382 32 215 8.6E-19 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 Pfam PF00005 ABC transporter 24 166 1.9E-36 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03995 8a5406742ce3f3b455d0fc5b13007dae 233 PANTHER PTHR24220 5 233 7.5E-102 T 20-04-2016 APRE_RS07600 57cfa462595e61ff27be562228226b6c 116 SUPERFAMILY SSF46785 4 80 5.58E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07600 57cfa462595e61ff27be562228226b6c 116 Gene3D G3DSA:1.10.10.10 5 59 4.6E-6 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04160 51ee75cfdbd38e1cb86a5ac373830445 206 Pfam PF04404 ERF superfamily 4 147 1.1E-33 T 20-04-2016 IPR007499 Essential recombination function protein APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 39.924 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 20-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 SMART SM00987 50 210 1.2E-35 T 20-04-2016 APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 SMART SM00986 50 210 1.2E-35 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 3.3E-25 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 PANTHER PTHR11264 1 226 2.2E-127 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 Gene3D G3DSA:3.40.470.10 4 222 5.0E-97 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 SUPERFAMILY SSF52141 3 222 8.5E-94 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APRE_RS04715 1ecee601d8f8d39f07b6378b353a7e47 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 7.1E-81 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APRE_RS01025 604650255aaedc18ec381a7515aebcbd 271 Pfam PF03609 PTS system sorbose-specific iic component 3 242 6.6E-73 T 20-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APRE_RS01025 604650255aaedc18ec381a7515aebcbd 271 PANTHER PTHR32502:SF10 1 269 1.9E-126 T 20-04-2016 APRE_RS01025 604650255aaedc18ec381a7515aebcbd 271 PANTHER PTHR32502 1 269 1.9E-126 T 20-04-2016 APRE_RS09290 fa62767e41a8cb5d22708a9657eb654e 90 SUPERFAMILY SSF53697 4 90 4.89E-12 T 20-04-2016 APRE_RS09290 fa62767e41a8cb5d22708a9657eb654e 90 Gene3D G3DSA:3.40.50.10490 13 90 1.5E-25 T 20-04-2016 APRE_RS09290 fa62767e41a8cb5d22708a9657eb654e 90 PANTHER PTHR32502:SF3 42 90 3.5E-19 T 20-04-2016 APRE_RS09290 fa62767e41a8cb5d22708a9657eb654e 90 PANTHER PTHR32502 42 90 3.5E-19 T 20-04-2016 APRE_RS00670 d694c27fed5ce8320fcf9f7e16223339 676 SUPERFAMILY SSF160964 375 420 3.4E-5 T 20-04-2016 APRE_RS00670 d694c27fed5ce8320fcf9f7e16223339 676 PANTHER PTHR30193:SF17 354 675 1.6E-110 T 20-04-2016 APRE_RS00670 d694c27fed5ce8320fcf9f7e16223339 676 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 459 667 8.1E-21 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00670 d694c27fed5ce8320fcf9f7e16223339 676 SUPERFAMILY SSF161098 424 664 8.11E-45 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00670 d694c27fed5ce8320fcf9f7e16223339 676 PANTHER PTHR30193 354 675 1.6E-110 T 20-04-2016 APRE_RS00670 d694c27fed5ce8320fcf9f7e16223339 676 Gene3D G3DSA:1.10.3720.10 374 665 5.7E-57 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 PANTHER PTHR10909 2 379 3.4E-183 T 20-04-2016 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 Gene3D G3DSA:1.10.540.10 2 118 1.2E-43 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 Gene3D G3DSA:1.20.140.10 216 378 6.7E-73 T 20-04-2016 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 1.6E-51 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 SUPERFAMILY SSF47203 226 378 2.26E-60 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 SUPERFAMILY SSF56645 4 241 2.23E-91 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 5.2E-28 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 Gene3D G3DSA:2.40.110.10 120 215 4.1E-40 T 20-04-2016 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 PANTHER PTHR10909:SF305 2 379 3.4E-183 T 20-04-2016 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 PIRSF PIRSF016578 3 378 2.4E-25 T 20-04-2016 APRE_RS06950 622ee76ff044caee979fff5c25ecfe63 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 117 6.7E-39 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 SUPERFAMILY SSF160964 11 41 4.58E-5 T 20-04-2016 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 SUPERFAMILY SSF161098 54 283 2.35E-57 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 PANTHER PTHR30193:SF6 3 290 3.5E-91 T 20-04-2016 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 PANTHER PTHR30193 3 290 3.5E-91 T 20-04-2016 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 Gene3D G3DSA:1.10.3720.10 60 290 3.3E-58 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 289 8.3E-18 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS01400 b9826ca939ac3199ba948d0af3c3046d 293 Gene3D G3DSA:1.20.58.370 9 41 7.9E-5 T 20-04-2016 APRE_RS00190 737fd132d24aed1477f0d1fbc205829c 400 PANTHER PTHR10590 7 396 8.5E-135 T 20-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APRE_RS00190 737fd132d24aed1477f0d1fbc205829c 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 396 1.5E-57 T 20-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APRE_RS00190 737fd132d24aed1477f0d1fbc205829c 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.2E-19 T 20-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 PANTHER PTHR10366:SF256 292 443 1.6E-111 T 20-04-2016 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 PANTHER PTHR10366:SF256 477 593 1.6E-111 T 20-04-2016 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 PANTHER PTHR10366 292 443 1.6E-111 T 20-04-2016 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 PANTHER PTHR10366 477 593 1.6E-111 T 20-04-2016 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 Gene3D G3DSA:3.40.50.720 136 258 5.1E-13 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 SUPERFAMILY SSF51735 291 443 5.13E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 SUPERFAMILY SSF51735 477 587 5.13E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 Gene3D G3DSA:3.40.50.720 291 444 5.2E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 Gene3D G3DSA:3.40.50.720 478 504 5.2E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 Pfam PF13727 CoA-binding domain 77 248 5.5E-13 T 20-04-2016 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 Gene3D G3DSA:3.90.25.10 505 584 1.2E-7 T 20-04-2016 APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 Pfam PF02719 Polysaccharide biosynthesis protein 293 606 5.0E-119 T 20-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain APRE_RS06450 29c3733c37116b6ec61253eddf3ca6f3 656 SUPERFAMILY SSF53335 112 341 1.99E-18 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APRE_RS03975 072731878bb36d7c59265906c891adc7 75 Pfam PF03840 Preprotein translocase SecG subunit 4 72 2.2E-12 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APRE_RS03975 072731878bb36d7c59265906c891adc7 75 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 1.7E-13 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 PANTHER PTHR33991 5 233 4.3E-18 T 20-04-2016 APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 SUPERFAMILY SSF50249 7 81 3.26E-10 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 TIGRFAM TIGR00613 reco: DNA repair protein RecO 9 244 3.8E-28 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 Pfam PF02565 Recombination protein O C terminal 93 233 1.2E-14 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 Gene3D G3DSA:2.40.50.140 8 83 3.5E-10 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 SUPERFAMILY SSF57863 91 232 4.97E-14 T 20-04-2016 APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 Hamap MF_00201 DNA repair protein RecO [recO]. 5 247 17.947 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APRE_RS01805 4b5572f30921a28b54b0a961b2a729e9 255 Pfam PF11967 Recombination protein O N terminal 9 83 3.3E-14 T 20-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APRE_RS07800 3e9634fc3f2e948fbfe63459ad5de5f1 388 SUPERFAMILY SSF55874 248 362 2.76E-6 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07800 3e9634fc3f2e948fbfe63459ad5de5f1 388 Gene3D G3DSA:3.30.565.10 248 333 1.5E-4 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 Pfam PF13353 4Fe-4S single cluster domain 116 192 1.0E-4 T 20-04-2016 APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 PANTHER PTHR11228:SF19 51 424 1.9E-103 T 20-04-2016 APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 SMART SM00729 108 304 0.0027 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 SUPERFAMILY SSF102114 106 392 5.1E-52 T 20-04-2016 APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 PANTHER PTHR11228 51 424 1.9E-103 T 20-04-2016 APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 Pfam PF04055 Radical SAM superfamily 114 244 2.3E-18 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS05585 a1f69a11762e80d37bf0562d9cf0bd7e 446 Gene3D G3DSA:3.20.20.70 107 389 5.2E-51 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS06325 5bc6f9b4427643de233372851503be60 434 PANTHER PTHR11616 2 430 5.3E-137 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06325 5bc6f9b4427643de233372851503be60 434 SUPERFAMILY SSF161070 3 429 8.11E-100 T 20-04-2016 APRE_RS06325 5bc6f9b4427643de233372851503be60 434 Pfam PF00209 Sodium:neurotransmitter symporter family 148 432 2.5E-21 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06325 5bc6f9b4427643de233372851503be60 434 Pfam PF00209 Sodium:neurotransmitter symporter family 2 132 3.7E-13 T 20-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 APRE_RS06325 5bc6f9b4427643de233372851503be60 434 PANTHER PTHR11616:SF154 2 430 5.3E-137 T 20-04-2016 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 Gene3D G3DSA:3.90.1300.10 2 465 1.9E-136 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 SUPERFAMILY SSF75304 2 464 1.24E-120 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 465 7.2E-151 T 20-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 ProSitePatterns PS00571 Amidases signature. 145 176 - T 20-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 Pfam PF01425 Amidase 22 456 1.0E-123 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 6 468 69.674 T 20-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 PANTHER PTHR11895 3 470 1.8E-161 T 20-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APRE_RS05000 6a237348c4440270b66d3f1d44e53dd6 470 PANTHER PTHR11895:SF7 3 470 1.8E-161 T 20-04-2016 APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 PANTHER PTHR24221:SF138 246 577 8.7E-75 T 20-04-2016 APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 Pfam PF00005 ABC transporter 351 501 5.8E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 SMART SM00382 360 546 1.0E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 SUPERFAMILY SSF90123 17 323 8.11E-12 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 Gene3D G3DSA:3.40.50.300 328 572 1.6E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 PANTHER PTHR24221 246 577 8.7E-75 T 20-04-2016 APRE_RS06045 39fe00fc00a9c2bf66e321cd52b0dac2 579 SUPERFAMILY SSF52540 326 571 1.04E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01355 509eaede00f2952921112ca158d780bd 392 PANTHER PTHR36178 1 392 1.3E-119 T 20-04-2016 APRE_RS01355 509eaede00f2952921112ca158d780bd 392 Pfam PF03616 Sodium/glutamate symporter 3 359 7.8E-99 T 20-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APRE_RS01355 509eaede00f2952921112ca158d780bd 392 PANTHER PTHR36178:SF1 1 392 1.3E-119 T 20-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APRE_RS01625 d381d524911b9a6ed701f988abb8c93d 388 PANTHER PTHR32196:SF30 1 370 2.1E-100 T 20-04-2016 APRE_RS01625 d381d524911b9a6ed701f988abb8c93d 388 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 345 2.4E-40 T 20-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APRE_RS01625 d381d524911b9a6ed701f988abb8c93d 388 PANTHER PTHR32196 1 370 2.1E-100 T 20-04-2016 APRE_RS03205 387e9c54cdc20d2106b19130e5e730b3 324 Gene3D G3DSA:3.90.1640.10 22 202 7.4E-29 T 20-04-2016 APRE_RS03205 387e9c54cdc20d2106b19130e5e730b3 324 Pfam PF01368 DHH family 24 162 1.3E-14 T 20-04-2016 IPR001667 DDH domain APRE_RS03205 387e9c54cdc20d2106b19130e5e730b3 324 Pfam PF02272 DHHA1 domain 263 315 3.7E-8 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APRE_RS03205 387e9c54cdc20d2106b19130e5e730b3 324 SUPERFAMILY SSF64182 22 292 2.49E-61 T 20-04-2016 APRE_RS08345 a774f0cdf901550a3d77f331f933b2cc 181 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 10 158 1.8E-37 T 20-04-2016 IPR012652 Energy coupling factor transporter S component ThiW APRE_RS08345 a774f0cdf901550a3d77f331f933b2cc 181 PIRSF PIRSF024534 1 166 5.9E-28 T 20-04-2016 IPR012652 Energy coupling factor transporter S component ThiW APRE_RS08345 a774f0cdf901550a3d77f331f933b2cc 181 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 10 156 1.8E-43 T 20-04-2016 IPR012652 Energy coupling factor transporter S component ThiW APRE_RS06525 b7be21a46dc3d7c4cbebad0e5b3ae04a 276 Gene3D G3DSA:1.20.120.330 136 272 7.5E-23 T 20-04-2016 APRE_RS06525 b7be21a46dc3d7c4cbebad0e5b3ae04a 276 Pfam PF04439 Streptomycin adenylyltransferase 4 264 8.7E-13 T 20-04-2016 IPR007530 Aminoglycoside 6-adenylyltransferase APRE_RS06525 b7be21a46dc3d7c4cbebad0e5b3ae04a 276 SUPERFAMILY SSF81631 127 269 4.39E-32 T 20-04-2016 APRE_RS00515 e8322be06ffe62bf486ab270dcda895c 454 PANTHER PTHR11206 6 446 1.0E-89 T 20-04-2016 APRE_RS00515 e8322be06ffe62bf486ab270dcda895c 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 419 3.3E-69 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS00515 e8322be06ffe62bf486ab270dcda895c 454 Pfam PF01554 MatE 255 406 4.1E-24 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS00515 e8322be06ffe62bf486ab270dcda895c 454 Pfam PF01554 MatE 22 182 2.6E-23 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS00515 e8322be06ffe62bf486ab270dcda895c 454 PIRSF PIRSF006603 1 451 8.6E-110 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS00515 e8322be06ffe62bf486ab270dcda895c 454 PANTHER PTHR11206:SF132 6 446 1.0E-89 T 20-04-2016 APRE_RS01785 d9dd3e197258e1477505d0702635a8ea 318 Pfam PF02562 PhoH-like protein 95 298 3.8E-94 T 20-04-2016 IPR003714 PhoH-like protein GO:0005524 APRE_RS01785 d9dd3e197258e1477505d0702635a8ea 318 PANTHER PTHR30473 1 318 2.9E-158 T 20-04-2016 APRE_RS01785 d9dd3e197258e1477505d0702635a8ea 318 SUPERFAMILY SSF52540 12 50 2.79E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01785 d9dd3e197258e1477505d0702635a8ea 318 SUPERFAMILY SSF52540 94 262 2.79E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01785 d9dd3e197258e1477505d0702635a8ea 318 Gene3D G3DSA:3.40.50.300 93 297 5.0E-89 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01785 d9dd3e197258e1477505d0702635a8ea 318 PANTHER PTHR30473:SF1 1 318 2.9E-158 T 20-04-2016 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 4 206 3.1E-76 T 20-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 PANTHER PTHR30182:SF2 6 218 3.6E-77 T 20-04-2016 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 PANTHER PTHR30182 6 218 3.6E-77 T 20-04-2016 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 PIRSF PIRSF036692 2 219 3.2E-70 T 20-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 Gene3D G3DSA:3.30.70.260 139 212 9.8E-9 T 20-04-2016 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 Gene3D G3DSA:3.30.1330.90 15 138 2.0E-26 T 20-04-2016 IPR029009 Allosteric substrate binding domain APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 SUPERFAMILY SSF143548 20 138 4.71E-30 T 20-04-2016 IPR029009 Allosteric substrate binding domain APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 Pfam PF03315 Serine dehydratase beta chain 6 76 5.0E-12 T 20-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APRE_RS00500 c75381305c6e7d0e0c244e0c09f39480 220 SUPERFAMILY SSF55021 148 218 1.37E-8 T 20-04-2016 APRE_RS08805 0f23f0b651a3c45bd19853e170b64149 155 Pfam PF14584 Protein of unknown function (DUF4446) 5 153 1.1E-39 T 20-04-2016 IPR027981 Protein of unknown function DUF4446 APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 ProSitePatterns PS00202 Rubredoxin signature. 32 42 - T 20-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 PIRSF PIRSF000071 1 52 1.5E-26 T 20-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 Gene3D G3DSA:2.20.28.10 2 50 5.2E-27 T 20-04-2016 IPR004039 Rubredoxin-type fold APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 PRINTS PR00163 Rubredoxin signature 32 48 2.2E-13 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 PRINTS PR00163 Rubredoxin signature 2 18 2.2E-13 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 Pfam PF00301 Rubredoxin 2 48 2.7E-24 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APRE_RS07560 79ce22dad053cd061c5430df71f998e0 52 SUPERFAMILY SSF57802 2 51 3.03E-22 T 20-04-2016 APRE_RS03925 d8d771f1c6f07de086e5bc15e53a4a68 208 PANTHER PTHR11907:SF9 48 202 7.4E-26 T 20-04-2016 APRE_RS03925 d8d771f1c6f07de086e5bc15e53a4a68 208 PANTHER PTHR11907 48 202 7.4E-26 T 20-04-2016 APRE_RS03925 d8d771f1c6f07de086e5bc15e53a4a68 208 Gene3D G3DSA:3.40.50.2020 27 204 9.0E-21 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS03925 d8d771f1c6f07de086e5bc15e53a4a68 208 SUPERFAMILY SSF53271 49 202 1.44E-19 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APRE_RS03925 d8d771f1c6f07de086e5bc15e53a4a68 208 Pfam PF00156 Phosphoribosyl transferase domain 134 203 3.8E-9 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 PANTHER PTHR33279:SF3 1 196 7.7E-37 T 20-04-2016 APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 Pfam PF01206 Sulfurtransferase TusA 2 71 7.8E-15 T 20-04-2016 IPR001455 TusA-like domain APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 SUPERFAMILY SSF64307 1 71 3.14E-13 T 20-04-2016 IPR001455 TusA-like domain APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 SUPERFAMILY SSF75169 101 189 6.48E-12 T 20-04-2016 IPR027396 DsrEFH-like APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 Pfam PF02635 DsrE/DsrF-like family 128 189 3.3E-5 T 20-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 Gene3D G3DSA:3.30.110.40 1 71 9.1E-15 T 20-04-2016 IPR001455 TusA-like domain APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 Gene3D G3DSA:3.40.1260.10 128 185 5.7E-12 T 20-04-2016 IPR027396 DsrEFH-like APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 PANTHER PTHR33279 1 196 7.7E-37 T 20-04-2016 APRE_RS01990 65ab0bb60fccca0355b4b7e44bda692d 199 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 196 1.8E-64 T 20-04-2016 IPR019870 Selenium metabolism protein YedF APRE_RS02795 77bce955f1ba836ade7bf5fc22bdc912 429 Pfam PF05140 ResB-like family 352 413 1.1E-6 T 20-04-2016 IPR007816 ResB-like domain APRE_RS02795 77bce955f1ba836ade7bf5fc22bdc912 429 Pfam PF05140 ResB-like family 17 257 2.0E-41 T 20-04-2016 IPR007816 ResB-like domain APRE_RS02795 77bce955f1ba836ade7bf5fc22bdc912 429 PANTHER PTHR31566 2 429 5.7E-44 T 20-04-2016 APRE_RS02795 77bce955f1ba836ade7bf5fc22bdc912 429 PANTHER PTHR31566:SF0 2 429 5.7E-44 T 20-04-2016 APRE_RS02780 8edfd1fcc35446c490d83aed39dcf138 342 SUPERFAMILY SSF161098 140 327 4.19E-29 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02780 8edfd1fcc35446c490d83aed39dcf138 342 PANTHER PTHR30151:SF15 142 342 9.2E-47 T 20-04-2016 APRE_RS02780 8edfd1fcc35446c490d83aed39dcf138 342 Gene3D G3DSA:1.10.3720.10 139 333 1.3E-24 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02780 8edfd1fcc35446c490d83aed39dcf138 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 164 327 7.2E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02780 8edfd1fcc35446c490d83aed39dcf138 342 PANTHER PTHR30151 142 342 9.2E-47 T 20-04-2016 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 SUPERFAMILY SSF53187 4 86 1.31E-85 T 20-04-2016 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 SUPERFAMILY SSF53187 211 422 1.31E-85 T 20-04-2016 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 SUPERFAMILY SSF101821 87 211 5.86E-33 T 20-04-2016 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 Gene3D G3DSA:2.30.250.10 86 217 6.8E-46 T 20-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 13 421 3.7E-117 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 Gene3D G3DSA:3.40.630.10 218 423 1.2E-94 T 20-04-2016 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 Gene3D G3DSA:3.40.630.10 5 85 1.2E-94 T 20-04-2016 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 256 274 5.3E-38 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 388 403 5.3E-38 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 143 160 5.3E-38 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 299 315 5.3E-38 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 75 91 5.3E-38 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 108 128 5.3E-38 T 20-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 APRE_RS02075 59f74812393c587499e903515d97f4ac 424 PANTHER PTHR28570 4 423 4.1E-162 T 20-04-2016 APRE_RS05315 ef4005ba2f7a94bfbe313113b972af4e 117 Pfam PF03780 Asp23 family, cell envelope-related function 9 115 3.9E-27 T 20-04-2016 IPR005531 Alkaline shock protein Asp23 APRE_RS05315 ef4005ba2f7a94bfbe313113b972af4e 117 PANTHER PTHR34297:SF2 1 115 8.5E-29 T 20-04-2016 APRE_RS05315 ef4005ba2f7a94bfbe313113b972af4e 117 PANTHER PTHR34297 1 115 8.5E-29 T 20-04-2016 APRE_RS06960 e8a0c4e905f155ce296e4b643c687596 115 PANTHER PTHR33931:SF2 1 115 1.8E-31 T 20-04-2016 APRE_RS06960 e8a0c4e905f155ce296e4b643c687596 115 PANTHER PTHR33931 1 115 1.8E-31 T 20-04-2016 APRE_RS06960 e8a0c4e905f155ce296e4b643c687596 115 Pfam PF03788 LrgA family 15 107 1.1E-28 T 20-04-2016 IPR005538 LrgA/CidA family GO:0016021 APRE_RS00230 389255309481a113040bd616796a7bc5 408 Pfam PF05977 Transmembrane secretion effector 5 399 4.2E-20 T 20-04-2016 IPR010290 Transmembrane secretion effector APRE_RS00230 389255309481a113040bd616796a7bc5 408 Gene3D G3DSA:1.20.1250.20 6 197 1.9E-15 T 20-04-2016 APRE_RS00230 389255309481a113040bd616796a7bc5 408 Gene3D G3DSA:1.20.1250.20 214 391 3.8E-10 T 20-04-2016 APRE_RS00230 389255309481a113040bd616796a7bc5 408 SUPERFAMILY SSF103473 6 395 2.88E-38 T 20-04-2016 IPR020846 Major facilitator superfamily domain APRE_RS00230 389255309481a113040bd616796a7bc5 408 PANTHER PTHR23513:SF4 1 401 2.1E-66 T 20-04-2016 APRE_RS00230 389255309481a113040bd616796a7bc5 408 PANTHER PTHR23513 1 401 2.1E-66 T 20-04-2016 APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 Pfam PF09186 Domain of unknown function (DUF1949) 145 196 1.6E-8 T 20-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 SUPERFAMILY SSF54211 6 127 5.69E-37 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 Pfam PF01205 Uncharacterized protein family UPF0029 23 125 5.6E-30 T 20-04-2016 IPR001498 Impact, N-terminal APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 20-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 Gene3D G3DSA:3.30.70.240 139 205 1.8E-7 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 PANTHER PTHR16301 8 210 6.1E-52 T 20-04-2016 IPR023582 Impact family APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 SUPERFAMILY SSF54980 139 201 4.46E-8 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 Gene3D G3DSA:3.30.230.30 8 128 1.9E-42 T 20-04-2016 IPR001498 Impact, N-terminal APRE_RS06160 e8afb51c8b67696b3b3975d23bb39db6 212 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 201 8.3E-51 T 20-04-2016 IPR015796 Impact family, bacterial/archaeal APRE_RS05475 0da4509917dddbaeaa79f58ef4c846fb 137 Pfam PF11070 Protein of unknown function (DUF2871) 1 133 5.0E-47 T 20-04-2016 IPR021299 Protein of unknown function DUF2871 APRE_RS03695 a68c120a43673fabe1bfc36cbaad856b 248 SUPERFAMILY SSF53474 4 246 3.67E-22 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS03695 a68c120a43673fabe1bfc36cbaad856b 248 Pfam PF12697 Alpha/beta hydrolase family 14 239 4.3E-8 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APRE_RS03695 a68c120a43673fabe1bfc36cbaad856b 248 Gene3D G3DSA:3.40.50.1820 5 245 5.2E-22 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS03395 2d8c6502369e84cb1bbfe8a1fd849ad0 236 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 8 87 4.6E-25 T 20-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APRE_RS03395 2d8c6502369e84cb1bbfe8a1fd849ad0 236 Pfam PF01478 Type IV leader peptidase family 103 201 4.4E-9 T 20-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APRE_RS03395 2d8c6502369e84cb1bbfe8a1fd849ad0 236 PANTHER PTHR30487:SF0 1 232 1.3E-39 T 20-04-2016 APRE_RS03395 2d8c6502369e84cb1bbfe8a1fd849ad0 236 PANTHER PTHR30487 1 232 1.3E-39 T 20-04-2016 APRE_RS06580 2c1a61b51cba6537aed23cf66d2682d0 292 SMART SM00530 11 67 2.2E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS06580 2c1a61b51cba6537aed23cf66d2682d0 292 Gene3D G3DSA:1.10.260.40 2 69 1.2E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS06580 2c1a61b51cba6537aed23cf66d2682d0 292 Pfam PF13560 Helix-turn-helix domain 7 63 2.3E-9 T 20-04-2016 APRE_RS06580 2c1a61b51cba6537aed23cf66d2682d0 292 SUPERFAMILY SSF47413 3 68 2.68E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 SUPERFAMILY SSF51556 53 383 2.33E-94 T 20-04-2016 IPR032466 Metal-dependent hydrolase APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 SUPERFAMILY SSF51338 383 453 4.32E-28 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 SUPERFAMILY SSF51338 1 52 4.32E-28 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 Gene3D G3DSA:3.20.20.140 68 369 1.2E-102 T 20-04-2016 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 454 9.7E-137 T 20-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 Gene3D G3DSA:2.30.40.10 370 441 4.4E-11 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 Gene3D G3DSA:2.30.40.10 3 67 1.5E-20 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 Pfam PF01979 Amidohydrolase family 51 435 3.1E-30 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 PANTHER PTHR11647 1 455 3.1E-150 T 20-04-2016 APRE_RS01940 116debda39f3ba96142d73c3afb2b930 457 PANTHER PTHR11647:SF1 1 455 3.1E-150 T 20-04-2016 APRE_RS08490 9638da767d071770fdce4cd10458bc44 301 PANTHER PTHR39430 21 291 6.5E-27 T 20-04-2016 APRE_RS08490 9638da767d071770fdce4cd10458bc44 301 Pfam PF02517 CAAX protease self-immunity 145 236 1.0E-12 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 APRE_RS04355 382731cdc136b986a501e33b824b89e7 738 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 85 425 5.6E-36 T 20-04-2016 IPR010090 Phage tail tape measure protein APRE_RS04355 382731cdc136b986a501e33b824b89e7 738 Pfam PF10145 Phage-related minor tail protein 125 320 1.5E-30 T 20-04-2016 IPR010090 Phage tail tape measure protein APRE_RS06660 74b368db08bcba34a0cc107242be514c 307 Gene3D G3DSA:2.40.50.140 30 64 3.2E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS06660 74b368db08bcba34a0cc107242be514c 307 PANTHER PTHR30001 193 293 1.3E-17 T 20-04-2016 APRE_RS06660 74b368db08bcba34a0cc107242be514c 307 Pfam PF10150 Ribonuclease E/G family 192 291 7.4E-23 T 20-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 SUPERFAMILY SSF46785 9 137 8.65E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 Pfam PF01047 MarR family 32 89 2.4E-12 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 2.6E-5 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 2.6E-5 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 2.6E-5 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 PANTHER PTHR33164 1 149 7.5E-23 T 20-04-2016 APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 Gene3D G3DSA:1.10.10.10 4 137 3.0E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06225 eb4580b3b5efa524a3cf4e896208f91f 151 SMART SM00347 25 125 4.6E-17 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 157 33.151 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 SUPERFAMILY SSF55068 3 156 1.01E-57 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 PANTHER PTHR10173:SF40 5 147 2.0E-54 T 20-04-2016 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 Gene3D G3DSA:3.30.1060.10 3 152 1.4E-57 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 151 1.8E-47 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 PANTHER PTHR10173 5 147 2.0E-54 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APRE_RS02925 4650c1bda5f7bbb9431a4a3057c47596 162 Pfam PF01625 Peptide methionine sulfoxide reductase 4 152 9.3E-55 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 Pfam PF00013 KH domain 211 267 3.3E-7 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 Gene3D G3DSA:1.10.3210.10 314 494 6.2E-43 T 20-04-2016 IPR006674 HD domain APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 Pfam PF12072 Domain of unknown function (DUF3552) 11 203 9.5E-52 T 20-04-2016 IPR022711 Ribonuclease Y, N-terminal APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 PANTHER PTHR12826 187 517 3.9E-132 T 20-04-2016 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 SUPERFAMILY SSF109604 315 468 4.26E-29 T 20-04-2016 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 SUPERFAMILY SSF54791 206 301 1.81E-15 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 Gene3D G3DSA:3.30.1370.10 218 300 3.7E-7 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 SMART SM00322 206 273 1.5E-7 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 13 518 1.1E-215 T 20-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 Hamap MF_00335 Ribonuclease Y [rny]. 10 518 24.427 T 20-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 Pfam PF01966 HD domain 335 426 2.9E-19 T 20-04-2016 IPR006674 HD domain APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 TIGRFAM TIGR00277 HDIG: HDIG domain 330 407 2.2E-26 T 20-04-2016 IPR006675 HDIG domain APRE_RS04870 0e7177ffdbf9b81af5cae56fb671e910 518 SMART SM00471 330 436 3.4E-13 T 20-04-2016 IPR003607 HD/PDEase domain APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 Pfam PF00664 ABC transporter transmembrane region 20 284 1.9E-14 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 PANTHER PTHR24222 7 584 2.6E-136 T 20-04-2016 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 Pfam PF00005 ABC transporter 352 499 3.5E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 PANTHER PTHR24222:SF24 7 584 2.6E-136 T 20-04-2016 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 Gene3D G3DSA:1.20.1560.10 5 314 1.6E-35 T 20-04-2016 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 SUPERFAMILY SSF52540 331 568 9.45E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 SMART SM00382 360 553 3.3E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 SUPERFAMILY SSF90123 5 315 9.55E-41 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APRE_RS03670 2f4500b00136556e2391132fd2ae3472 584 Gene3D G3DSA:3.40.50.300 336 571 2.1E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02640 af29a83aea10cc8b5cacd2f23cc68bbc 234 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 58 233 4.1E-46 T 20-04-2016 IPR015304 ZinT domain GO:0008270 APRE_RS02640 af29a83aea10cc8b5cacd2f23cc68bbc 234 Gene3D G3DSA:2.40.128.20 48 233 5.6E-49 T 20-04-2016 IPR012674 Calycin APRE_RS02640 af29a83aea10cc8b5cacd2f23cc68bbc 234 SUPERFAMILY SSF50814 62 233 2.08E-17 T 20-04-2016 IPR011038 Calycin-like APRE_RS02950 a3770d2e10a26e2ae85d7f797a659993 463 Pfam PF07373 CAMP factor (Cfa) 99 205 9.8E-24 T 20-04-2016 IPR010860 CAMP factor APRE_RS02730 3ca58244aff647783b799a846bcc6988 221 SUPERFAMILY SSF52540 3 219 7.89E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02730 3ca58244aff647783b799a846bcc6988 221 SMART SM00382 28 217 1.9E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS02730 3ca58244aff647783b799a846bcc6988 221 Gene3D G3DSA:3.40.50.300 3 219 1.7E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02730 3ca58244aff647783b799a846bcc6988 221 PANTHER PTHR24220 5 219 1.5E-69 T 20-04-2016 APRE_RS02730 3ca58244aff647783b799a846bcc6988 221 Pfam PF00005 ABC transporter 19 167 1.9E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02730 3ca58244aff647783b799a846bcc6988 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS05145 c43a10d1ae8732a42acf7332fe4c33f7 49 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 43 3.7E-24 T 20-04-2016 IPR023975 Six-cysteine peptide SCIFF APRE_RS05145 c43a10d1ae8732a42acf7332fe4c33f7 49 Pfam PF13165 Protein of unknown function (DUF4001) 2 44 8.0E-22 T 20-04-2016 IPR023975 Six-cysteine peptide SCIFF APRE_RS02495 b03f92126affbe8aaee82ac9930d11fe 414 PANTHER PTHR37814:SF1 1 367 1.5E-63 T 20-04-2016 APRE_RS02495 b03f92126affbe8aaee82ac9930d11fe 414 PANTHER PTHR37814 1 367 1.5E-63 T 20-04-2016 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 Gene3D G3DSA:1.10.3860.10 4 402 1.5E-125 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 Pfam PF00375 Sodium:dicarboxylate symporter family 13 397 3.8E-120 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 SUPERFAMILY SSF118215 12 397 1.83E-112 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.5E-52 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PANTHER PTHR11958 8 397 7.2E-129 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APRE_RS02135 dd5f907c94b1d55332ce10a80666c423 409 PANTHER PTHR11958:SF44 8 397 7.2E-129 T 20-04-2016 APRE_RS03575 e1bd17020a29bd6272c05536b30f891b 258 PANTHER PTHR30465 11 252 6.1E-42 T 20-04-2016 APRE_RS03575 e1bd17020a29bd6272c05536b30f891b 258 SUPERFAMILY SSF161098 58 245 9.42E-19 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS03575 e1bd17020a29bd6272c05536b30f891b 258 Gene3D G3DSA:1.10.3720.10 58 258 3.2E-14 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS03575 e1bd17020a29bd6272c05536b30f891b 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 252 9.5E-10 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.0E-52 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 SUPERFAMILY SSF54686 1 134 1.83E-59 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.2E-63 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.523 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.3E-40 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.3E-40 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.3E-40 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.3E-40 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 Gene3D G3DSA:3.90.1170.10 23 134 1.5E-56 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 PANTHER PTHR12220 1 137 7.2E-87 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 PANTHER PTHR12220:SF14 1 137 7.2E-87 T 20-04-2016 APRE_RS08035 d2e6a3d610f8f375d5fcfaaaa5f48455 142 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 20-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS01845 7a4803d638c5a61b2395325fd17ed53a 105 PANTHER PTHR35810:SF1 8 97 2.4E-22 T 20-04-2016 APRE_RS01845 7a4803d638c5a61b2395325fd17ed53a 105 PANTHER PTHR35810 8 97 2.4E-22 T 20-04-2016 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 330 344 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 292 312 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 408 430 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 358 373 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 466 481 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 520 536 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 545 561 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PRINTS PR00743 Glycosyl hydrolase family 36 signature 241 256 3.7E-62 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 SUPERFAMILY SSF51445 325 666 9.84E-111 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 648 736 9.2E-27 T 20-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 29 284 2.6E-92 T 20-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 Gene3D G3DSA:3.20.20.70 326 619 2.9E-49 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PIRSF PIRSF005536 1 739 0.0 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PANTHER PTHR22762 315 595 4.3E-92 T 20-04-2016 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 ProSitePatterns PS00512 Alpha-galactosidase signature. 359 374 - T 20-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 Pfam PF02065 Melibiase 289 635 1.7E-162 T 20-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APRE_RS00380 bd9aac857c4aeba8c90798e40d0f52a1 739 PANTHER PTHR22762:SF81 315 595 4.3E-92 T 20-04-2016 APRE_RS07520 24364f82922fa804c0c5d37fff7bcbbf 96 Pfam PF10031 Small integral membrane protein (DUF2273) 35 82 3.1E-11 T 20-04-2016 IPR018730 Protein of unknown function DUF2273 APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 SUPERFAMILY SSF57802 153 195 3.08E-11 T 20-04-2016 APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 Pfam PF02915 Rubrerythrin 11 143 3.2E-30 T 20-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 Gene3D G3DSA:2.20.28.10 152 192 6.5E-16 T 20-04-2016 IPR004039 Rubredoxin-type fold APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 SUPERFAMILY SSF47240 3 152 7.14E-37 T 20-04-2016 IPR009078 Ferritin-like superfamily APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 PANTHER PTHR33746:SF1 1 196 2.4E-85 T 20-04-2016 APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 Gene3D G3DSA:1.20.1260.10 1 150 1.5E-51 T 20-04-2016 IPR012347 Ferritin-related APRE_RS08480 3ce3ba7cae258d9c0bcc629cdb4249a0 196 PANTHER PTHR33746 1 196 2.4E-85 T 20-04-2016 APRE_RS06485 d3a1e18b6372bd4a33820ddd0d19bb32 155 Pfam PF03682 Uncharacterised protein family (UPF0158) 13 141 1.0E-6 T 20-04-2016 IPR005361 Uncharacterised protein family UPF0158 APRE_RS06545 a44029bdfba033632d2362ec33dd01eb 363 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 287 1.4E-77 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APRE_RS06545 a44029bdfba033632d2362ec33dd01eb 363 PANTHER PTHR32039:SF8 62 354 4.1E-96 T 20-04-2016 APRE_RS06545 a44029bdfba033632d2362ec33dd01eb 363 Gene3D G3DSA:3.40.50.450 114 273 2.5E-11 T 20-04-2016 APRE_RS06545 a44029bdfba033632d2362ec33dd01eb 363 SUPERFAMILY SSF102405 80 287 4.12E-39 T 20-04-2016 APRE_RS06545 a44029bdfba033632d2362ec33dd01eb 363 Pfam PF02481 DNA recombination-mediator protein A 73 278 4.3E-78 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APRE_RS06545 a44029bdfba033632d2362ec33dd01eb 363 PANTHER PTHR32039 62 354 4.1E-96 T 20-04-2016 APRE_RS06425 4a70a33f16a40af99c108c352e238949 411 PANTHER PTHR12526:SF322 155 405 3.2E-49 T 20-04-2016 APRE_RS06425 4a70a33f16a40af99c108c352e238949 411 SUPERFAMILY SSF53756 123 402 3.11E-37 T 20-04-2016 APRE_RS06425 4a70a33f16a40af99c108c352e238949 411 PANTHER PTHR12526 155 405 3.2E-49 T 20-04-2016 APRE_RS06425 4a70a33f16a40af99c108c352e238949 411 Pfam PF00534 Glycosyl transferases group 1 232 383 3.2E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APRE_RS06425 4a70a33f16a40af99c108c352e238949 411 Gene3D G3DSA:3.40.50.2000 227 383 3.1E-15 T 20-04-2016 APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 Gene3D G3DSA:2.170.150.20 2 143 5.3E-58 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 1 128 35.244 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 SUPERFAMILY SSF51316 2 143 2.41E-56 T 20-04-2016 IPR011057 Mss4-like APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 136 2.0E-57 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 Pfam PF01641 SelR domain 8 127 3.5E-46 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 PANTHER PTHR10173 10 144 3.4E-50 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APRE_RS07715 31f1dcdb418ad1a6abac8de510933000 144 PANTHER PTHR10173:SF31 10 144 3.4E-50 T 20-04-2016 APRE_RS08475 4f63eb26ffe55adca753a7aabb019aaf 240 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 237 1.1E-76 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APRE_RS08475 4f63eb26ffe55adca753a7aabb019aaf 240 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 119 137 - T 20-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APRE_RS08475 4f63eb26ffe55adca753a7aabb019aaf 240 PANTHER PTHR11280 1 237 1.1E-94 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APRE_RS08475 4f63eb26ffe55adca753a7aabb019aaf 240 SUPERFAMILY SSF100950 1 238 8.76E-80 T 20-04-2016 APRE_RS08475 4f63eb26ffe55adca753a7aabb019aaf 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 223 1.8E-17 T 20-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APRE_RS08475 4f63eb26ffe55adca753a7aabb019aaf 240 Gene3D G3DSA:3.40.50.1360 1 238 2.4E-85 T 20-04-2016 APRE_RS01565 0b33fd5ae56fef8bb4bc872c788fd865 147 Pfam PF00293 NUDIX domain 9 111 1.2E-12 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APRE_RS01565 0b33fd5ae56fef8bb4bc872c788fd865 147 SUPERFAMILY SSF55811 9 128 8.26E-20 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS01565 0b33fd5ae56fef8bb4bc872c788fd865 147 Gene3D G3DSA:3.90.79.10 4 144 2.3E-23 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APRE_RS01565 0b33fd5ae56fef8bb4bc872c788fd865 147 PANTHER PTHR22769:SF34 1 111 2.2E-12 T 20-04-2016 APRE_RS01565 0b33fd5ae56fef8bb4bc872c788fd865 147 PANTHER PTHR22769 1 111 2.2E-12 T 20-04-2016 APRE_RS00130 7dcf4264e68451aefa0bd162565106e1 367 Gene3D G3DSA:2.40.420.10 17 110 2.1E-26 T 20-04-2016 APRE_RS00130 7dcf4264e68451aefa0bd162565106e1 367 Gene3D G3DSA:3.40.50.10690 124 366 1.4E-85 T 20-04-2016 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 SMART SM00862 152 227 2.3E-22 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 Gene3D G3DSA:1.10.10.10 131 230 2.5E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 PANTHER PTHR26402:SF50 7 230 5.8E-65 T 20-04-2016 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 SMART SM00448 7 118 1.1E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 Gene3D G3DSA:3.40.50.2300 7 130 3.8E-32 T 20-04-2016 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 SUPERFAMILY SSF46894 137 227 8.33E-21 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 PANTHER PTHR26402 7 230 5.8E-65 T 20-04-2016 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 Pfam PF00072 Response regulator receiver domain 9 118 2.8E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 SUPERFAMILY SSF52172 6 169 8.9E-33 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS03360 6caee88be0cd21d47b646afdf5b7fccd 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.3E-21 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS08430 a182a33c76b4fc5b90bb2b91d98829b3 212 Gene3D G3DSA:1.20.1080.10 7 204 6.4E-27 T 20-04-2016 IPR023271 Aquaporin-like APRE_RS08430 a182a33c76b4fc5b90bb2b91d98829b3 212 PANTHER PTHR30520 7 204 7.1E-18 T 20-04-2016 APRE_RS08430 a182a33c76b4fc5b90bb2b91d98829b3 212 Pfam PF01226 Formate/nitrite transporter 7 204 3.2E-30 T 20-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 SUPERFAMILY SSF50494 76 282 6.94E-55 T 20-04-2016 IPR009003 Peptidase S1, PA clan APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 Gene3D G3DSA:2.40.10.10 177 290 7.0E-39 T 20-04-2016 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 Gene3D G3DSA:2.30.42.10 309 375 3.5E-13 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PANTHER PTHR22939 76 414 3.6E-86 T 20-04-2016 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 3.0E-35 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 3.0E-35 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PRINTS PR00834 HtrA/DegQ protease family signature 326 338 3.0E-35 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PRINTS PR00834 HtrA/DegQ protease family signature 119 131 3.0E-35 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 3.0E-35 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 3.0E-35 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 SUPERFAMILY SSF50156 267 376 2.0E-14 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 Pfam PF13180 PDZ domain 324 376 3.0E-12 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 Pfam PF13365 Trypsin-like peptidase domain 110 250 1.5E-30 T 20-04-2016 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 Gene3D G3DSA:2.40.10.10 75 176 3.9E-25 T 20-04-2016 APRE_RS06620 dd24ff6ac67d21d30e40bc46755a1e15 415 PANTHER PTHR22939:SF79 76 414 3.6E-86 T 20-04-2016 APRE_RS03085 3caef759ac3ca5c02f1ce86f186cc226 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 82 1.3E-8 T 20-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APRE_RS03085 3caef759ac3ca5c02f1ce86f186cc226 88 SUPERFAMILY SSF143011 1 83 3.4E-16 T 20-04-2016 APRE_RS05050 9bc5014075b42653c20206cd52bcff1b 139 Pfam PF03780 Asp23 family, cell envelope-related function 16 119 7.9E-24 T 20-04-2016 IPR005531 Alkaline shock protein Asp23 APRE_RS05050 9bc5014075b42653c20206cd52bcff1b 139 PANTHER PTHR34297 1 139 4.2E-20 T 20-04-2016 APRE_RS05050 9bc5014075b42653c20206cd52bcff1b 139 PANTHER PTHR34297:SF1 1 139 4.2E-20 T 20-04-2016 APRE_RS03825 fc5c8ca8c87eca619e57ea9575c7227f 134 SUPERFAMILY SSF55729 1 127 4.88E-24 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS03825 fc5c8ca8c87eca619e57ea9575c7227f 134 Pfam PF13673 Acetyltransferase (GNAT) domain 27 125 1.7E-13 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APRE_RS03825 fc5c8ca8c87eca619e57ea9575c7227f 134 PANTHER PTHR23091 1 125 1.4E-12 T 20-04-2016 APRE_RS03825 fc5c8ca8c87eca619e57ea9575c7227f 134 Gene3D G3DSA:3.40.630.30 1 128 2.0E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS05105 2386a03c759b3a3d6e218a5eea98452a 194 SUPERFAMILY SSF140478 34 182 1.83E-52 T 20-04-2016 IPR023353 LemA-like domain APRE_RS05105 2386a03c759b3a3d6e218a5eea98452a 194 PANTHER PTHR34478:SF2 7 194 6.5E-72 T 20-04-2016 APRE_RS05105 2386a03c759b3a3d6e218a5eea98452a 194 Gene3D G3DSA:1.20.1440.20 22 192 1.6E-61 T 20-04-2016 IPR023353 LemA-like domain APRE_RS05105 2386a03c759b3a3d6e218a5eea98452a 194 Pfam PF04011 LemA family 16 192 5.2E-67 T 20-04-2016 IPR007156 LemA APRE_RS05105 2386a03c759b3a3d6e218a5eea98452a 194 PANTHER PTHR34478 7 194 6.5E-72 T 20-04-2016 APRE_RS06415 225b9b28c5acaa82202bb72abae00323 297 SMART SM00901 30 121 2.0E-26 T 20-04-2016 IPR014966 FRG domain APRE_RS06415 225b9b28c5acaa82202bb72abae00323 297 Pfam PF08867 FRG domain 35 116 6.2E-19 T 20-04-2016 IPR014966 FRG domain APRE_RS06650 bca5e3173abde80e8357f6b0094dddcc 201 PANTHER PTHR33602 22 199 1.5E-22 T 20-04-2016 APRE_RS06650 bca5e3173abde80e8357f6b0094dddcc 201 Hamap MF_01114 Regulatory protein RecX [recX]. 39 199 13.12 T 20-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APRE_RS06650 bca5e3173abde80e8357f6b0094dddcc 201 PANTHER PTHR33602:SF1 22 199 1.5E-22 T 20-04-2016 APRE_RS06650 bca5e3173abde80e8357f6b0094dddcc 201 Pfam PF02631 RecX family 81 197 1.9E-26 T 20-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APRE_RS06650 bca5e3173abde80e8357f6b0094dddcc 201 Gene3D G3DSA:1.10.10.10 169 196 1.3E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 Gene3D G3DSA:3.10.450.30 53 155 1.1E-37 T 20-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 Pfam PF00545 ribonuclease 69 153 1.1E-24 T 20-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 SUPERFAMILY SSF53933 55 155 5.95E-30 T 20-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 PRINTS PR00117 Barnase signature 136 154 8.7E-10 T 20-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 PRINTS PR00117 Barnase signature 56 73 8.7E-10 T 20-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 PRINTS PR00117 Barnase signature 114 133 8.7E-10 T 20-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 APRE_RS07610 6ed9a714fb37d5d445173d53814e9ed5 157 PIRSF PIRSF001013 2 156 1.8E-37 T 20-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 PANTHER PTHR23132 91 284 3.2E-14 T 20-04-2016 APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 SUPERFAMILY SSF52440 2 69 6.33E-6 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 SMART SM01209 101 279 0.0051 T 20-04-2016 APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 Pfam PF13535 ATP-grasp domain 140 284 1.7E-21 T 20-04-2016 APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 Gene3D G3DSA:3.30.470.20 105 390 2.4E-39 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 Gene3D G3DSA:3.40.50.20 1 104 4.6E-13 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APRE_RS06440 072b55e6c4852f05e705c123c64896dc 399 SUPERFAMILY SSF56059 82 310 4.77E-38 T 20-04-2016 APRE_RS05235 475c9a801ff4f00af39876454d2380c2 232 Pfam PF02616 Segregation and condensation protein ScpA 23 222 2.6E-21 T 20-04-2016 IPR003768 Segregation and condensation protein A APRE_RS05235 475c9a801ff4f00af39876454d2380c2 232 PANTHER PTHR33969:SF2 1 220 2.1E-34 T 20-04-2016 APRE_RS05235 475c9a801ff4f00af39876454d2380c2 232 PANTHER PTHR33969 1 220 2.1E-34 T 20-04-2016 APRE_RS07145 4caea1e6381f431baf5c04ce15be4f85 169 SUPERFAMILY SSF47240 1 159 1.31E-46 T 20-04-2016 IPR009078 Ferritin-like superfamily APRE_RS07145 4caea1e6381f431baf5c04ce15be4f85 169 Gene3D G3DSA:1.20.1260.10 1 159 3.0E-50 T 20-04-2016 IPR012347 Ferritin-related APRE_RS07145 4caea1e6381f431baf5c04ce15be4f85 169 PANTHER PTHR11431:SF4 7 162 4.9E-37 T 20-04-2016 APRE_RS07145 4caea1e6381f431baf5c04ce15be4f85 169 Pfam PF00210 Ferritin-like domain 7 142 4.7E-33 T 20-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APRE_RS07145 4caea1e6381f431baf5c04ce15be4f85 169 PANTHER PTHR11431 7 162 4.9E-37 T 20-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 PANTHER PTHR30544 2 341 6.0E-138 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 Pfam PF13394 4Fe-4S single cluster domain 111 196 7.0E-8 T 20-04-2016 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 SUPERFAMILY SSF102114 100 294 1.96E-18 T 20-04-2016 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 338 2.3E-112 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 341 63.711 T 20-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 PIRSF PIRSF006004 1 341 1.5E-121 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 Pfam PF04055 Radical SAM superfamily 107 264 1.9E-21 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 PANTHER PTHR30544:SF5 2 341 6.0E-138 T 20-04-2016 APRE_RS03470 f70c7cdbea1ea059215c396fb23a8936 341 Gene3D G3DSA:3.20.20.70 102 316 2.9E-20 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS01375 c0dbc63cfb08ce0fb4b4dda9d5f68c99 219 SUPERFAMILY SSF52540 53 209 8.86E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01375 c0dbc63cfb08ce0fb4b4dda9d5f68c99 219 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 53 209 8.8E-6 T 20-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APRE_RS01375 c0dbc63cfb08ce0fb4b4dda9d5f68c99 219 Gene3D G3DSA:3.40.50.300 53 214 1.2E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS01375 c0dbc63cfb08ce0fb4b4dda9d5f68c99 219 PANTHER PTHR32309 10 217 3.0E-13 T 20-04-2016 APRE_RS07120 1fc6a2edb2c57b45084b5de92c958503 258 SUPERFAMILY SSF63817 14 257 1.96E-49 T 20-04-2016 IPR023365 Sortase domain APRE_RS07120 1fc6a2edb2c57b45084b5de92c958503 258 Gene3D G3DSA:2.40.260.10 12 258 5.1E-67 T 20-04-2016 IPR023365 Sortase domain APRE_RS07120 1fc6a2edb2c57b45084b5de92c958503 258 Pfam PF04203 Sortase family 92 256 3.9E-23 T 20-04-2016 IPR005754 Sortase family APRE_RS07120 1fc6a2edb2c57b45084b5de92c958503 258 TIGRFAM TIGR03064 sortase_srtB: sortase, SrtB family 6 252 8.0E-54 T 20-04-2016 IPR009835 Sortase B family APRE_RS00795 874eb7a43f52024bde981503cd015930 216 SUPERFAMILY SSF56784 3 213 1.16E-49 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00795 874eb7a43f52024bde981503cd015930 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 2 184 5.8E-33 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00795 874eb7a43f52024bde981503cd015930 216 Gene3D G3DSA:3.40.50.1000 77 212 1.9E-32 T 20-04-2016 IPR023214 HAD-like domain APRE_RS00795 874eb7a43f52024bde981503cd015930 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 121 179 1.6E-8 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APRE_RS00795 874eb7a43f52024bde981503cd015930 216 Gene3D G3DSA:1.10.150.240 14 76 1.4E-13 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APRE_RS00795 874eb7a43f52024bde981503cd015930 216 PANTHER PTHR18901 3 214 9.8E-41 T 20-04-2016 APRE_RS05975 753bdb4c33fc446a63ccf918ece655e8 76 Gene3D G3DSA:1.10.1740.10 3 70 2.8E-17 T 20-04-2016 APRE_RS05975 753bdb4c33fc446a63ccf918ece655e8 76 PANTHER PTHR30173 3 68 1.2E-13 T 20-04-2016 APRE_RS05975 753bdb4c33fc446a63ccf918ece655e8 76 Pfam PF04542 Sigma-70 region 2 7 70 3.1E-10 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS05975 753bdb4c33fc446a63ccf918ece655e8 76 SUPERFAMILY SSF88946 4 71 7.06E-16 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS07090 75097cd8a63dd5efde12d7b2b109409a 331 PANTHER PTHR10584:SF203 1 330 2.3E-80 T 20-04-2016 APRE_RS07090 75097cd8a63dd5efde12d7b2b109409a 331 Gene3D G3DSA:3.40.1190.20 2 324 7.5E-71 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS07090 75097cd8a63dd5efde12d7b2b109409a 331 SUPERFAMILY SSF53613 1 317 2.81E-66 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS07090 75097cd8a63dd5efde12d7b2b109409a 331 Pfam PF00294 pfkB family carbohydrate kinase 3 302 1.9E-31 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APRE_RS07090 75097cd8a63dd5efde12d7b2b109409a 331 PANTHER PTHR10584 1 330 2.3E-80 T 20-04-2016 APRE_RS07025 5d636b3024777dae20d6bf6525e66d12 147 SUPERFAMILY SSF46785 7 140 2.32E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07025 5d636b3024777dae20d6bf6525e66d12 147 SMART SM00347 24 124 5.8E-9 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS07025 5d636b3024777dae20d6bf6525e66d12 147 Gene3D G3DSA:1.10.10.10 12 141 6.9E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS07025 5d636b3024777dae20d6bf6525e66d12 147 Pfam PF13463 Winged helix DNA-binding domain 32 97 6.8E-7 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS07025 5d636b3024777dae20d6bf6525e66d12 147 PANTHER PTHR33164:SF16 1 145 1.3E-13 T 20-04-2016 APRE_RS07025 5d636b3024777dae20d6bf6525e66d12 147 PANTHER PTHR33164 1 145 1.3E-13 T 20-04-2016 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 Pfam PF01968 Hydantoinase/oxoprolinase 197 502 5.3E-67 T 20-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 6 176 2.9E-18 T 20-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 PANTHER PTHR11365 379 545 2.7E-60 T 20-04-2016 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 PANTHER PTHR11365 1 349 2.7E-60 T 20-04-2016 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 SUPERFAMILY SSF53067 6 86 1.36E-14 T 20-04-2016 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 SUPERFAMILY SSF53067 402 498 1.36E-14 T 20-04-2016 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 SUPERFAMILY SSF53067 255 334 1.36E-14 T 20-04-2016 APRE_RS03020 d950af60bd61122a1b5b301f6ec2c35f 708 Gene3D G3DSA:3.30.420.190 269 295 6.5E-4 T 20-04-2016 APRE_RS02085 b4371ba868437fe8c7b6597ba2f45ab0 503 Gene3D G3DSA:3.10.105.10 265 469 2.4E-55 T 20-04-2016 APRE_RS02085 b4371ba868437fe8c7b6597ba2f45ab0 503 Gene3D G3DSA:3.90.76.10 43 192 3.9E-38 T 20-04-2016 APRE_RS02085 b4371ba868437fe8c7b6597ba2f45ab0 503 PANTHER PTHR30290 1 489 4.7E-116 T 20-04-2016 APRE_RS02085 b4371ba868437fe8c7b6597ba2f45ab0 503 SUPERFAMILY SSF53850 35 500 2.81E-120 T 20-04-2016 APRE_RS02085 b4371ba868437fe8c7b6597ba2f45ab0 503 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 422 5.0E-84 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain APRE_RS02085 b4371ba868437fe8c7b6597ba2f45ab0 503 PIRSF PIRSF002741 1 502 3.3E-103 T 20-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APRE_RS06210 29d9279ed039d26ef912ac794df29757 441 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 4 418 6.6E-136 T 20-04-2016 IPR021228 Protein of unknown function DUF2791 APRE_RS04025 2895c6cbd04bbe1a1d7e39464e49d05b 176 SUPERFAMILY SSF55154 3 172 1.49E-20 T 20-04-2016 IPR033469 CYTH-like domain APRE_RS04025 2895c6cbd04bbe1a1d7e39464e49d05b 176 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 4 153 7.0E-14 T 20-04-2016 APRE_RS04025 2895c6cbd04bbe1a1d7e39464e49d05b 176 Gene3D G3DSA:2.40.320.10 3 173 9.8E-26 T 20-04-2016 IPR023577 CYTH domain APRE_RS04025 2895c6cbd04bbe1a1d7e39464e49d05b 176 Pfam PF01928 CYTH domain 3 166 5.6E-11 T 20-04-2016 IPR023577 CYTH domain APRE_RS08230 9ed7dc87883724e0816de92e9dcf21f7 188 Pfam PF02417 Chromate transporter 8 174 4.1E-38 T 20-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 APRE_RS08230 9ed7dc87883724e0816de92e9dcf21f7 188 PANTHER PTHR33567 1 185 6.9E-43 T 20-04-2016 APRE_RS08230 9ed7dc87883724e0816de92e9dcf21f7 188 PANTHER PTHR33567:SF2 1 185 6.9E-43 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PRINTS PR01806 Virulence factor MviN signature 31 50 5.3E-13 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PRINTS PR01806 Virulence factor MviN signature 253 279 5.3E-13 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PRINTS PR01806 Virulence factor MviN signature 351 370 5.3E-13 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PRINTS PR01806 Virulence factor MviN signature 152 173 5.3E-13 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PRINTS PR01806 Virulence factor MviN signature 403 420 5.3E-13 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 495 1.6E-88 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PANTHER PTHR11206:SF90 64 79 5.8E-36 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PANTHER PTHR11206:SF90 208 433 5.8E-36 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PANTHER PTHR11206:SF90 491 500 5.8E-36 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 Pfam PF03023 MviN-like protein 26 464 2.5E-78 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PANTHER PTHR11206 64 79 5.8E-36 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PANTHER PTHR11206 208 433 5.8E-36 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PANTHER PTHR11206 491 500 5.8E-36 T 20-04-2016 APRE_RS07040 38a8131cfb208f07798d3078c65c4a11 512 PIRSF PIRSF002869 1 502 8.2E-104 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APRE_RS04975 201e454d95835f098114ddc02f2ca478 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 6.0E-32 T 20-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 APRE_RS04975 201e454d95835f098114ddc02f2ca478 116 Gene3D G3DSA:2.30.30.110 1 113 1.1E-45 T 20-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APRE_RS04975 201e454d95835f098114ddc02f2ca478 116 PIRSF PIRSF033490 1 113 1.4E-35 T 20-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 APRE_RS04975 201e454d95835f098114ddc02f2ca478 116 PANTHER PTHR33988 1 115 7.5E-43 T 20-04-2016 APRE_RS04975 201e454d95835f098114ddc02f2ca478 116 SUPERFAMILY SSF50118 1 113 4.25E-39 T 20-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APRE_RS04975 201e454d95835f098114ddc02f2ca478 116 PANTHER PTHR33988:SF2 1 115 7.5E-43 T 20-04-2016 APRE_RS01795 5e9dd8a95ca5af8f9f775a0827cf9ec1 131 SUPERFAMILY SSF53927 2 130 4.78E-42 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APRE_RS01795 5e9dd8a95ca5af8f9f775a0827cf9ec1 131 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 97 9.0E-18 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APRE_RS01795 5e9dd8a95ca5af8f9f775a0827cf9ec1 131 Gene3D G3DSA:3.40.140.10 2 131 1.2E-50 T 20-04-2016 APRE_RS01795 5e9dd8a95ca5af8f9f775a0827cf9ec1 131 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 93 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APRE_RS01795 5e9dd8a95ca5af8f9f775a0827cf9ec1 131 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 130 9.9E-46 T 20-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APRE_RS01795 5e9dd8a95ca5af8f9f775a0827cf9ec1 131 PANTHER PTHR11644 3 131 5.0E-61 T 20-04-2016 APRE_RS01820 f70933d9332de210ccae50de52ef1741 276 PANTHER PTHR31756:SF3 8 274 2.7E-87 T 20-04-2016 APRE_RS01820 f70933d9332de210ccae50de52ef1741 276 PANTHER PTHR31756 8 274 2.7E-87 T 20-04-2016 APRE_RS01820 f70933d9332de210ccae50de52ef1741 276 Pfam PF03618 Kinase/pyrophosphorylase 7 259 1.8E-84 T 20-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APRE_RS01820 f70933d9332de210ccae50de52ef1741 276 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 266 54.7 T 20-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 SUPERFAMILY SSF46894 116 213 5.39E-14 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 140 210 1.2E-13 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 Gene3D G3DSA:3.40.50.2300 1 79 1.2E-5 T 20-04-2016 APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 Gene3D G3DSA:1.10.10.10 115 212 4.0E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 SMART SM00862 137 211 7.8E-7 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 PANTHER PTHR26402:SF117 1 211 8.5E-15 T 20-04-2016 APRE_RS00920 0f56dd936d82f8b6e9bade928d710001 219 PANTHER PTHR26402 1 211 8.5E-15 T 20-04-2016 APRE_RS04130 dcdb7bbf449b5864397891f22839a5c5 65 Gene3D G3DSA:1.10.10.10 10 57 2.9E-8 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04130 dcdb7bbf449b5864397891f22839a5c5 65 SUPERFAMILY SSF46955 10 58 4.03E-8 T 20-04-2016 IPR009061 Putative DNA-binding domain APRE_RS04130 dcdb7bbf449b5864397891f22839a5c5 65 Pfam PF12728 Helix-turn-helix domain 11 58 2.3E-6 T 20-04-2016 APRE_RS00815 87a6b9a7e2d546c1e075a7b5a5f3996f 337 SUPERFAMILY SSF53756 1 332 1.26E-44 T 20-04-2016 APRE_RS00815 87a6b9a7e2d546c1e075a7b5a5f3996f 337 Gene3D G3DSA:3.40.50.2000 128 257 8.5E-11 T 20-04-2016 APRE_RS00815 87a6b9a7e2d546c1e075a7b5a5f3996f 337 Pfam PF00534 Glycosyl transferases group 1 147 299 3.6E-11 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APRE_RS00815 87a6b9a7e2d546c1e075a7b5a5f3996f 337 Pfam PF13439 Glycosyltransferase Family 4 41 139 7.6E-16 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APRE_RS00815 87a6b9a7e2d546c1e075a7b5a5f3996f 337 PANTHER PTHR12526 42 332 6.4E-32 T 20-04-2016 APRE_RS01775 1e7537e8400002773adeb6c888e77641 314 Pfam PF12127 SigmaW regulon antibacterial 4 307 1.7E-154 T 20-04-2016 IPR022853 Uncharacterised protein family YdfA-immunity APRE_RS01775 1e7537e8400002773adeb6c888e77641 314 Hamap MF_01562 UPF0365 protein . 1 310 44.799 T 20-04-2016 IPR022853 Uncharacterised protein family YdfA-immunity APRE_RS06175 4d6335ee771aa5b4b8d29156df864e5d 82 Pfam PF04226 Transglycosylase associated protein 31 79 6.8E-12 T 20-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 APRE_RS02520 40984c0dd891d8e6798f35a85cfd0dce 372 Pfam PF13421 SPFH domain-Band 7 family 104 270 3.3E-15 T 20-04-2016 APRE_RS02520 40984c0dd891d8e6798f35a85cfd0dce 372 Pfam PF09851 Short C-terminal domain 344 370 6.0E-8 T 20-04-2016 IPR018649 SHOCT domain APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 Gene3D G3DSA:3.40.605.10 6 263 8.0E-87 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 Pfam PF00171 Aldehyde dehydrogenase family 15 478 6.2E-163 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 Gene3D G3DSA:3.40.309.10 264 453 1.5E-64 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 PANTHER PTHR11699:SF97 1 490 2.6E-245 T 20-04-2016 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 SUPERFAMILY SSF53720 5 481 3.53E-161 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APRE_RS06320 b2b79b3f6bac8eb0f9dd8363a7d6f353 490 PANTHER PTHR11699 1 490 2.6E-245 T 20-04-2016 APRE_RS07605 5e36f93585fe7cf0ece083fb583f1601 84 Pfam PF01337 Barstar (barnase inhibitor) 4 71 3.8E-7 T 20-04-2016 IPR000468 Barstar (barnase inhibitor) APRE_RS07605 5e36f93585fe7cf0ece083fb583f1601 84 Gene3D G3DSA:3.30.370.10 2 71 3.0E-8 T 20-04-2016 IPR000468 Barstar (barnase inhibitor) APRE_RS07605 5e36f93585fe7cf0ece083fb583f1601 84 SUPERFAMILY SSF52038 2 73 8.37E-8 T 20-04-2016 IPR000468 Barstar (barnase inhibitor) APRE_RS01870 b0337b4f43d2548ba2b4650399c764c9 344 PANTHER PTHR30106 1 344 9.6E-117 T 20-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APRE_RS01870 b0337b4f43d2548ba2b4650399c764c9 344 PANTHER PTHR30106:SF1 1 344 9.6E-117 T 20-04-2016 APRE_RS01870 b0337b4f43d2548ba2b4650399c764c9 344 Pfam PF03601 Conserved hypothetical protein 698 10 322 4.1E-77 T 20-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APRE_RS02685 f528b14788fba5982199db1bab10a73b 267 SUPERFAMILY SSF56300 39 265 6.68E-30 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02685 f528b14788fba5982199db1bab10a73b 267 PANTHER PTHR31302 3 266 1.6E-32 T 20-04-2016 APRE_RS02685 f528b14788fba5982199db1bab10a73b 267 Gene3D G3DSA:3.60.21.10 43 217 2.0E-21 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02685 f528b14788fba5982199db1bab10a73b 267 Pfam PF00149 Calcineurin-like phosphoesterase 44 200 1.5E-11 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APRE_RS02765 6472f53a018b56fa775be33ce389e65c 721 SUPERFAMILY SSF56300 152 341 9.65E-24 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02765 6472f53a018b56fa775be33ce389e65c 721 SUPERFAMILY SSF56300 16 114 9.65E-24 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02765 6472f53a018b56fa775be33ce389e65c 721 Gene3D G3DSA:3.60.21.10 20 341 1.1E-25 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS02765 6472f53a018b56fa775be33ce389e65c 721 Pfam PF00149 Calcineurin-like phosphoesterase 18 313 5.2E-15 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 PANTHER PTHR11071 21 153 1.1E-50 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 Gene3D G3DSA:2.40.100.10 2 161 2.1E-58 T 20-04-2016 IPR029000 Cyclophilin-like domain APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 SUPERFAMILY SSF50891 6 162 5.99E-53 T 20-04-2016 IPR029000 Cyclophilin-like domain APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 PIRSF PIRSF001467 1 164 5.6E-41 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 3.7E-19 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 120 3.7E-19 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 48 60 3.7E-19 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 22 37 3.7E-19 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 160 5.3E-49 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APRE_RS02345 f0d6240af21c7a14fc3f0c53da2a7cda 175 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 43 60 - T 20-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APRE_RS08540 dfdc3555f3629f99703f72d9d31d66da 284 SUPERFAMILY SSF161098 7 284 3.18E-65 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08540 dfdc3555f3629f99703f72d9d31d66da 284 PANTHER PTHR32243 1 284 3.6E-75 T 20-04-2016 APRE_RS08540 dfdc3555f3629f99703f72d9d31d66da 284 Gene3D G3DSA:1.10.3720.10 3 271 7.9E-57 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS08540 dfdc3555f3629f99703f72d9d31d66da 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 270 1.4E-19 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS06855 d1a912df14287e017eb0fcdfcb602544 736 Pfam PF01136 Peptidase family U32 75 286 4.8E-70 T 20-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS06855 d1a912df14287e017eb0fcdfcb602544 736 Pfam PF12392 Collagenase 364 478 3.2E-17 T 20-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS06855 d1a912df14287e017eb0fcdfcb602544 736 PANTHER PTHR30217 1 648 4.2E-132 T 20-04-2016 APRE_RS06855 d1a912df14287e017eb0fcdfcb602544 736 PANTHER PTHR30217:SF10 1 648 4.2E-132 T 20-04-2016 APRE_RS06855 d1a912df14287e017eb0fcdfcb602544 736 ProSitePatterns PS01276 Peptidase family U32 signature. 160 178 - T 20-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 Gene3D G3DSA:3.50.50.60 1 114 5.5E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 Gene3D G3DSA:3.50.50.60 239 305 5.5E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 Gene3D G3DSA:3.50.50.60 115 227 3.6E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 130 150 - T 20-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.9E-34 T 20-04-2016 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.9E-34 T 20-04-2016 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.9E-34 T 20-04-2016 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 2.9E-34 T 20-04-2016 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.9E-34 T 20-04-2016 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PANTHER PTHR22912:SF48 1 306 2.5E-130 T 20-04-2016 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 2 303 1.0E-111 T 20-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 SUPERFAMILY SSF51905 1 304 8.7E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 291 3.0E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 190 206 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 57 67 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 5.7E-66 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APRE_RS03950 39ba317fd5d0f6fcf0c158e528c07eaa 308 PANTHER PTHR22912 1 306 2.5E-130 T 20-04-2016 APRE_RS03380 cba6a34f1d354eb9fdfaee2f0c6e5206 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 3.4E-62 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APRE_RS03380 cba6a34f1d354eb9fdfaee2f0c6e5206 186 Pfam PF01765 Ribosome recycling factor 22 184 2.3E-57 T 20-04-2016 IPR023584 Ribosome recycling factor domain APRE_RS03380 cba6a34f1d354eb9fdfaee2f0c6e5206 186 SUPERFAMILY SSF55194 4 184 1.96E-63 T 20-04-2016 IPR023584 Ribosome recycling factor domain APRE_RS03380 cba6a34f1d354eb9fdfaee2f0c6e5206 186 Gene3D G3DSA:1.10.132.20 67 186 1.7E-38 T 20-04-2016 IPR023584 Ribosome recycling factor domain APRE_RS03380 cba6a34f1d354eb9fdfaee2f0c6e5206 186 PANTHER PTHR20982 2 186 2.0E-67 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APRE_RS03380 cba6a34f1d354eb9fdfaee2f0c6e5206 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 25.679 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APRE_RS07190 16bbf20c80e3f9d5e114bfce917ee564 510 PANTHER PTHR33451 6 510 2.6E-145 T 20-04-2016 APRE_RS07190 16bbf20c80e3f9d5e114bfce917ee564 510 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 6 456 1.6E-114 T 20-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 APRE_RS07190 16bbf20c80e3f9d5e114bfce917ee564 510 PANTHER PTHR33451:SF3 6 510 2.6E-145 T 20-04-2016 APRE_RS07190 16bbf20c80e3f9d5e114bfce917ee564 510 Pfam PF03553 Na+/H+ antiporter family 167 457 1.0E-44 T 20-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APRE_RS03990 1976359a04b051a871a877dc1a82c226 258 SUPERFAMILY SSF69796 6 238 9.55E-63 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APRE_RS03990 1976359a04b051a871a877dc1a82c226 258 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 7 237 30.481 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APRE_RS03990 1976359a04b051a871a877dc1a82c226 258 PANTHER PTHR34934 2 253 1.1E-61 T 20-04-2016 APRE_RS03990 1976359a04b051a871a877dc1a82c226 258 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 8 226 3.1E-56 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APRE_RS03990 1976359a04b051a871a877dc1a82c226 258 Pfam PF02511 Thymidylate synthase complementing protein 10 224 6.3E-66 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APRE_RS08710 e59fa75d955fe184051999cc78c379dd 147 Pfam PF12953 Domain of unknown function (DUF3842) 2 128 4.4E-44 T 20-04-2016 IPR024208 Protein of unknown function DUF3842 APRE_RS05890 94e0948452493719e755e5ed9604ef88 164 PANTHER PTHR34071 1 163 1.7E-15 T 20-04-2016 APRE_RS05890 94e0948452493719e755e5ed9604ef88 164 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 13 160 2.2E-14 T 20-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related APRE_RS05890 94e0948452493719e755e5ed9604ef88 164 SUPERFAMILY SSF50475 1 162 3.93E-29 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APRE_RS05890 94e0948452493719e755e5ed9604ef88 164 Gene3D G3DSA:2.30.110.10 1 162 4.7E-34 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APRE_RS00590 a7a146af9af9ec56eb941a8a2cd215ec 138 Gene3D G3DSA:3.10.129.10 6 137 7.0E-50 T 20-04-2016 IPR029069 HotDog domain APRE_RS00590 a7a146af9af9ec56eb941a8a2cd215ec 138 Pfam PF01575 MaoC like domain 13 111 8.3E-25 T 20-04-2016 IPR002539 MaoC-like domain APRE_RS00590 a7a146af9af9ec56eb941a8a2cd215ec 138 PANTHER PTHR13078 1 130 5.4E-40 T 20-04-2016 APRE_RS00590 a7a146af9af9ec56eb941a8a2cd215ec 138 SUPERFAMILY SSF54637 3 138 1.39E-43 T 20-04-2016 IPR029069 HotDog domain APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 Pfam PF12802 MarR family 33 85 1.1E-9 T 20-04-2016 APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 SUPERFAMILY SSF46785 32 139 2.88E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 Gene3D G3DSA:1.10.10.10 30 138 2.9E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 PANTHER PTHR33164 34 146 1.5E-15 T 20-04-2016 APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.2E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 1.2E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.2E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.2E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS02245 8250ceab3c78b7b4f3e11fbc5f2ee84e 160 SMART SM00347 20 122 2.2E-10 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APRE_RS02365 92bf782842a11b250aea679e452bce82 169 Pfam PF14512 Putative TM nitroreductase 5 156 2.6E-11 T 20-04-2016 IPR029478 Putative nitroreductase TM1586 APRE_RS02365 92bf782842a11b250aea679e452bce82 169 Gene3D G3DSA:3.40.109.10 3 160 7.6E-33 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS02365 92bf782842a11b250aea679e452bce82 169 SUPERFAMILY SSF55469 3 156 1.27E-28 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APRE_RS02365 92bf782842a11b250aea679e452bce82 169 PANTHER PTHR23026 1 155 9.8E-17 T 20-04-2016 APRE_RS05075 67396606eb946cfa40b985b8fbbc0275 312 SUPERFAMILY SSF56601 39 303 3.84E-40 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS05075 67396606eb946cfa40b985b8fbbc0275 312 PANTHER PTHR22935 44 253 4.0E-23 T 20-04-2016 APRE_RS05075 67396606eb946cfa40b985b8fbbc0275 312 Pfam PF00144 Beta-lactamase 42 282 1.2E-15 T 20-04-2016 IPR001466 Beta-lactamase-related APRE_RS05075 67396606eb946cfa40b985b8fbbc0275 312 Gene3D G3DSA:3.40.710.10 41 295 3.4E-33 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APRE_RS06410 92e4633e60c18c63ed5abdd785ba2b4a 233 Pfam PF08305 NPCBM/NEW2 domain 147 219 1.4E-6 T 20-04-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module APRE_RS06410 92e4633e60c18c63ed5abdd785ba2b4a 233 SUPERFAMILY SSF49785 127 222 1.32E-6 T 20-04-2016 IPR008979 Galactose-binding domain-like APRE_RS07875 8f2faffedb1018cb1b1120dcb6ac9e93 396 PANTHER PTHR31102 8 390 1.1E-75 T 20-04-2016 APRE_RS07875 8f2faffedb1018cb1b1120dcb6ac9e93 396 Pfam PF00999 Sodium/hydrogen exchanger family 7 376 3.3E-39 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 Gene3D G3DSA:3.20.20.70 3 202 9.1E-71 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 PANTHER PTHR20857:SF15 3 202 2.4E-68 T 20-04-2016 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 201 25.592 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 Pfam PF02581 Thiamine monophosphate synthase/TENI 4 183 4.8E-61 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 3 196 2.0E-62 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 PANTHER PTHR20857 3 202 2.4E-68 T 20-04-2016 APRE_RS08335 075ebfadb134f706a1c483febbc007c3 205 SUPERFAMILY SSF51391 3 201 1.57E-60 T 20-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APRE_RS00660 e6b1edc0eced2a2f8e3cd048bf9d6040 441 SUPERFAMILY SSF53850 36 413 8.31E-27 T 20-04-2016 APRE_RS00660 e6b1edc0eced2a2f8e3cd048bf9d6040 441 Gene3D G3DSA:3.40.190.10 1 150 2.0E-11 T 20-04-2016 APRE_RS00660 e6b1edc0eced2a2f8e3cd048bf9d6040 441 Gene3D G3DSA:3.40.190.10 196 358 3.7E-12 T 20-04-2016 APRE_RS00660 e6b1edc0eced2a2f8e3cd048bf9d6040 441 PANTHER PTHR30061 7 439 5.1E-15 T 20-04-2016 APRE_RS06435 96632731661c9157ec37368bca5751c9 196 PANTHER PTHR30576 1 196 1.2E-73 T 20-04-2016 APRE_RS06435 96632731661c9157ec37368bca5751c9 196 Pfam PF02397 Bacterial sugar transferase 7 188 2.6E-53 T 20-04-2016 IPR003362 Bacterial sugar transferase APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 Pfam PF01996 F420-0:Gamma-glutamyl ligase 11 385 1.1E-80 T 20-04-2016 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199|UniPathway: UPA00071 APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 Gene3D G3DSA:3.30.1330.100 250 392 1.4E-53 T 20-04-2016 APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 Gene3D G3DSA:3.30.1330.100 1 61 1.4E-53 T 20-04-2016 APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 SUPERFAMILY SSF144010 7 76 9.42E-43 T 20-04-2016 APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 SUPERFAMILY SSF144010 353 392 9.42E-43 T 20-04-2016 APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 SUPERFAMILY SSF144010 153 194 9.42E-43 T 20-04-2016 APRE_RS07575 5777f012e4711d3a6d8e995acaa14c6e 393 SUPERFAMILY SSF144010 233 325 9.42E-43 T 20-04-2016 APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1079 1143 1.8E-6 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1223 1287 1.3E-6 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1529 1594 0.002 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1772 1836 0.078 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1295 1359 1.3E-6 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1611 1676 3.8E-5 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1002 1071 3.0E-4 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1367 1431 1.0E-6 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1692 1756 0.0047 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1446 1514 1.5E-5 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS09410 3c45c533655d8cacb0d07ac0bc3e1f5b 2035 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1151 1215 2.4E-5 T 20-04-2016 IPR013378 Listeria/Bacterioides repeat APRE_RS03615 006d4355ab0f9529fcc49b71491e7e7f 102 Pfam PF13276 HTH-like domain 26 79 3.8E-14 T 20-04-2016 IPR025948 HTH-like domain APRE_RS00035 5bedc9e98c110aa6b1448c3ccb368636 101 SUPERFAMILY SSF52091 4 100 3.92E-21 T 20-04-2016 IPR002645 STAS domain APRE_RS00035 5bedc9e98c110aa6b1448c3ccb368636 101 PANTHER PTHR33495:SF2 2 101 9.0E-19 T 20-04-2016 APRE_RS00035 5bedc9e98c110aa6b1448c3ccb368636 101 PANTHER PTHR33495 2 101 9.0E-19 T 20-04-2016 APRE_RS00035 5bedc9e98c110aa6b1448c3ccb368636 101 Pfam PF01740 STAS domain 5 98 4.3E-14 T 20-04-2016 IPR002645 STAS domain APRE_RS00035 5bedc9e98c110aa6b1448c3ccb368636 101 Gene3D G3DSA:3.30.750.24 2 100 1.8E-25 T 20-04-2016 IPR002645 STAS domain APRE_RS00035 5bedc9e98c110aa6b1448c3ccb368636 101 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 100 2.1E-22 T 20-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 APRE_RS05445 c66a10b6ae49572fc339752593927761 239 Pfam PF00561 alpha/beta hydrolase fold 25 121 4.6E-15 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APRE_RS05445 c66a10b6ae49572fc339752593927761 239 SUPERFAMILY SSF53474 6 230 7.3E-45 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS05445 c66a10b6ae49572fc339752593927761 239 Gene3D G3DSA:3.40.50.1820 1 234 2.6E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS05445 c66a10b6ae49572fc339752593927761 239 PANTHER PTHR10992 5 232 7.9E-41 T 20-04-2016 APRE_RS02110 79aaa0f7c306963e64e1070a40c9c556 164 Pfam PF17099 Tryptophan transporter TrpP 2 160 2.8E-33 T 20-04-2016 IPR031360 Tryptophan transporter TrpP APRE_RS02110 79aaa0f7c306963e64e1070a40c9c556 164 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 76 5.0E-21 T 20-04-2016 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 Gene3D G3DSA:3.40.1190.20 1 295 2.1E-71 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 SUPERFAMILY SSF53613 1 295 8.57E-66 T 20-04-2016 IPR029056 Ribokinase-like APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 Pfam PF00294 pfkB family carbohydrate kinase 3 285 2.9E-49 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PRINTS PR00990 Ribokinase signature 168 183 1.8E-21 T 20-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PRINTS PR00990 Ribokinase signature 5 26 1.8E-21 T 20-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PRINTS PR00990 Ribokinase signature 101 114 1.8E-21 T 20-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PRINTS PR00990 Ribokinase signature 32 51 1.8E-21 T 20-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PRINTS PR00990 Ribokinase signature 208 219 1.8E-21 T 20-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PANTHER PTHR10584:SF166 1 296 3.5E-70 T 20-04-2016 APRE_RS08305 a294c906243d1cf3a33e52e9df5006c3 297 PANTHER PTHR10584 1 296 3.5E-70 T 20-04-2016 APRE_RS07710 d5c17fd132ecaf6b801610b2bb45a7ac 410 PANTHER PTHR11751 17 403 6.8E-25 T 20-04-2016 APRE_RS07710 d5c17fd132ecaf6b801610b2bb45a7ac 410 PANTHER PTHR11751:SF305 17 403 6.8E-25 T 20-04-2016 APRE_RS07710 d5c17fd132ecaf6b801610b2bb45a7ac 410 Gene3D G3DSA:3.40.640.10 54 323 9.5E-48 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APRE_RS07710 d5c17fd132ecaf6b801610b2bb45a7ac 410 SUPERFAMILY SSF53383 11 403 1.12E-52 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APRE_RS07710 d5c17fd132ecaf6b801610b2bb45a7ac 410 Pfam PF00155 Aminotransferase class I and II 36 403 1.2E-31 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APRE_RS08145 6fa1e35784204f415185f3fc91488276 447 PANTHER PTHR30588:SF0 1 443 1.4E-146 T 20-04-2016 APRE_RS08145 6fa1e35784204f415185f3fc91488276 447 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 419 7.1E-120 T 20-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APRE_RS08145 6fa1e35784204f415185f3fc91488276 447 PANTHER PTHR30588 1 443 1.4E-146 T 20-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APRE_RS08145 6fa1e35784204f415185f3fc91488276 447 Pfam PF05525 Branched-chain amino acid transport protein 7 430 1.4E-133 T 20-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APRE_RS06230 d077c132416e981c834f14eeaf2f26dd 418 SMART SM00854 76 324 1.8E-77 T 20-04-2016 IPR019079 Capsule synthesis protein, CapA APRE_RS06230 d077c132416e981c834f14eeaf2f26dd 418 PANTHER PTHR33393 69 321 2.5E-55 T 20-04-2016 APRE_RS06230 d077c132416e981c834f14eeaf2f26dd 418 Gene3D G3DSA:3.60.21.10 68 367 5.1E-29 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS06230 d077c132416e981c834f14eeaf2f26dd 418 PANTHER PTHR33393:SF2 69 321 2.5E-55 T 20-04-2016 APRE_RS06230 d077c132416e981c834f14eeaf2f26dd 418 SUPERFAMILY SSF56300 77 335 1.71E-42 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APRE_RS06230 d077c132416e981c834f14eeaf2f26dd 418 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 77 324 1.8E-68 T 20-04-2016 IPR019079 Capsule synthesis protein, CapA APRE_RS01630 132abe312eb5afc80fc461ab125b27e9 312 PANTHER PTHR32196 1 312 4.9E-90 T 20-04-2016 APRE_RS01630 132abe312eb5afc80fc461ab125b27e9 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 288 3.4E-36 T 20-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APRE_RS01630 132abe312eb5afc80fc461ab125b27e9 312 PANTHER PTHR32196:SF40 1 312 4.9E-90 T 20-04-2016 APRE_RS03010 5b75bd7445651e91110f22dcd215adf5 106 Gene3D G3DSA:3.30.360.10 1 49 1.8E-15 T 20-04-2016 APRE_RS03010 5b75bd7445651e91110f22dcd215adf5 106 Pfam PF16654 Diaminopimelic acid dehydrogenase C-terminal domain 1 54 2.0E-17 T 20-04-2016 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal KEGG: 00300+1.4.1.16|MetaCyc: PWY-2942|UniPathway: UPA00034 APRE_RS03010 5b75bd7445651e91110f22dcd215adf5 106 SUPERFAMILY SSF55347 1 54 4.71E-11 T 20-04-2016 APRE_RS01660 bc219298fb68b5e4557caa149b48939c 196 Gene3D G3DSA:1.10.3210.10 48 169 3.9E-10 T 20-04-2016 IPR006674 HD domain APRE_RS01660 bc219298fb68b5e4557caa149b48939c 196 SUPERFAMILY SSF109604 22 169 1.35E-11 T 20-04-2016 APRE_RS00465 c571889fb726899d52e6669b4d7c2e08 231 SUPERFAMILY SSF52833 73 218 2.51E-21 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00465 c571889fb726899d52e6669b4d7c2e08 231 Gene3D G3DSA:3.40.30.10 5 26 9.5E-29 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00465 c571889fb726899d52e6669b4d7c2e08 231 Gene3D G3DSA:3.40.30.10 72 226 9.5E-29 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS00465 c571889fb726899d52e6669b4d7c2e08 231 Pfam PF08534 Redoxin 73 200 2.5E-15 T 20-04-2016 IPR013740 Redoxin GO:0016491 APRE_RS09400 be4b23efdea9711d6ebed053062fdcdd 428 Pfam PF07373 CAMP factor (Cfa) 266 337 2.9E-6 T 20-04-2016 IPR010860 CAMP factor APRE_RS09400 be4b23efdea9711d6ebed053062fdcdd 428 Pfam PF07373 CAMP factor (Cfa) 48 257 4.3E-28 T 20-04-2016 IPR010860 CAMP factor APRE_RS06625 a44cd8c34135ad1f8512df83645a172a 371 Pfam PF12698 ABC-2 family transporter protein 23 359 2.0E-21 T 20-04-2016 APRE_RS03165 1f798be12052b94f34ddc2f8dc198f2e 295 SMART SM00382 45 189 0.002 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS03165 1f798be12052b94f34ddc2f8dc198f2e 295 SUPERFAMILY SSF52540 34 216 3.84E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS03165 1f798be12052b94f34ddc2f8dc198f2e 295 PANTHER PTHR22908 42 204 9.1E-28 T 20-04-2016 APRE_RS03165 1f798be12052b94f34ddc2f8dc198f2e 295 Pfam PF07728 AAA domain (dynein-related subfamily) 48 180 2.1E-25 T 20-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APRE_RS03165 1f798be12052b94f34ddc2f8dc198f2e 295 Gene3D G3DSA:3.40.50.300 33 197 3.7E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS07450 1c80bc5492dd9371c037cb93ba167815 68 Pfam PF05738 Cna protein B-type domain 4 53 7.4E-6 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS06395 4bd9914068bb1829b0c586cfad58beb0 228 Gene3D G3DSA:3.90.1720.10 4 136 2.6E-12 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APRE_RS06395 4bd9914068bb1829b0c586cfad58beb0 228 SUPERFAMILY SSF54001 28 127 2.16E-11 T 20-04-2016 APRE_RS06395 4bd9914068bb1829b0c586cfad58beb0 228 Pfam PF08460 Bacterial SH3 domain 166 215 5.1E-9 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS06395 4bd9914068bb1829b0c586cfad58beb0 228 Pfam PF05382 Bacteriophage peptidoglycan hydrolase 4 125 1.3E-39 T 20-04-2016 IPR008044 Bacteriophage lysin APRE_RS04525 70017c39b2ebfbbafd29a99630926d87 298 SUPERFAMILY SSF56112 53 254 1.31E-6 T 20-04-2016 IPR011009 Protein kinase-like domain APRE_RS04525 70017c39b2ebfbbafd29a99630926d87 298 Gene3D G3DSA:3.90.1200.10 169 282 2.2E-6 T 20-04-2016 APRE_RS04525 70017c39b2ebfbbafd29a99630926d87 298 PANTHER PTHR41283 35 296 3.0E-19 T 20-04-2016 APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 144 3.6E-38 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 2.2E-48 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 Gene3D G3DSA:3.100.10.10 31 151 2.1E-42 T 20-04-2016 APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 21.065 T 20-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 SUPERFAMILY SSF52080 10 144 5.63E-45 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 PANTHER PTHR12934 1 147 3.8E-64 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APRE_RS07975 f4b2fa7bbf69137983887a4edfc51823 159 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 20-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 SUPERFAMILY SSF50249 1 70 1.24E-26 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.178 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 4.8E-35 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 PANTHER PTHR33370 1 72 5.2E-41 T 20-04-2016 APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 Gene3D G3DSA:2.40.50.140 1 72 4.4E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.4E-28 T 20-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APRE_RS07960 5e4588aad646d016c5482548d36d24c4 72 SMART SM00316 4 72 2.0E-4 T 20-04-2016 IPR022967 RNA-binding domain, S1 APRE_RS07100 63ec4256c2b5ad5abc38c616529e2c21 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 146 2.7E-29 T 20-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APRE_RS07100 63ec4256c2b5ad5abc38c616529e2c21 183 PANTHER PTHR35011 1 171 2.0E-31 T 20-04-2016 APRE_RS03150 b56c13b6b6695c0d92a8e917739c4bb8 327 SMART SM01208 156 227 4.5E-8 T 20-04-2016 IPR011098 G5 domain APRE_RS08255 ad2d626360679c5e1ffb1ba858b703ee 177 PANTHER PTHR35011 9 172 1.8E-36 T 20-04-2016 APRE_RS08255 ad2d626360679c5e1ffb1ba858b703ee 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 150 5.4E-29 T 20-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APRE_RS08255 ad2d626360679c5e1ffb1ba858b703ee 177 PANTHER PTHR35011:SF3 9 172 1.8E-36 T 20-04-2016 APRE_RS02620 688b4b1cfcf51cbc6a3614e2fd48dde5 332 Gene3D G3DSA:3.30.1380.10 197 274 1.9E-5 T 20-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APRE_RS02620 688b4b1cfcf51cbc6a3614e2fd48dde5 332 PANTHER PTHR34385 193 329 1.4E-34 T 20-04-2016 APRE_RS02620 688b4b1cfcf51cbc6a3614e2fd48dde5 332 PANTHER PTHR34385:SF1 193 329 1.4E-34 T 20-04-2016 APRE_RS02620 688b4b1cfcf51cbc6a3614e2fd48dde5 332 SUPERFAMILY SSF55166 196 320 2.56E-25 T 20-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APRE_RS02620 688b4b1cfcf51cbc6a3614e2fd48dde5 332 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 196 311 3.3E-24 T 20-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 APRE_RS07350 5ae56ca5301df1a90da2a0a8ec5dfb94 486 PANTHER PTHR30618:SF0 31 486 5.5E-95 T 20-04-2016 APRE_RS07350 5ae56ca5301df1a90da2a0a8ec5dfb94 486 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 37 455 3.6E-76 T 20-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APRE_RS07350 5ae56ca5301df1a90da2a0a8ec5dfb94 486 PANTHER PTHR30618 31 486 5.5E-95 T 20-04-2016 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 SMART SM00862 155 231 2.4E-20 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 PANTHER PTHR26402 4 230 1.2E-87 T 20-04-2016 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 6.0E-25 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 Gene3D G3DSA:3.40.50.2300 2 127 2.1E-40 T 20-04-2016 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 PANTHER PTHR26402:SF614 4 230 1.2E-87 T 20-04-2016 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 Gene3D G3DSA:1.10.10.10 132 231 2.5E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 SUPERFAMILY SSF52172 1 174 1.21E-40 T 20-04-2016 IPR011006 CheY-like superfamily APRE_RS04580 ed3c2383990c6f9d17eb74215b070431 232 SMART SM00448 4 115 2.2E-42 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APRE_RS06675 966865f7e450c5857a096bf23c14672e 161 Pfam PF04093 rod shape-determining protein MreD 5 154 2.4E-8 T 20-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APRE_RS06675 966865f7e450c5857a096bf23c14672e 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 4 144 5.4E-11 T 20-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APRE_RS00325 44669d4f3bd307d8a36d21a3f44e1ff2 182 PANTHER PTHR39966 1 168 2.3E-23 T 20-04-2016 APRE_RS00325 44669d4f3bd307d8a36d21a3f44e1ff2 182 Pfam PF01814 Hemerythrin HHE cation binding domain 3 139 3.1E-12 T 20-04-2016 IPR012312 Haemerythrin-like APRE_RS00325 44669d4f3bd307d8a36d21a3f44e1ff2 182 Gene3D G3DSA:1.20.120.520 4 159 5.3E-18 T 20-04-2016 APRE_RS07550 757f4b9cd2a029a45639cd7531365f4f 127 Gene3D G3DSA:3.30.565.10 32 106 5.6E-9 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07550 757f4b9cd2a029a45639cd7531365f4f 127 Pfam PF13581 Histidine kinase-like ATPase domain 31 114 4.6E-10 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS07550 757f4b9cd2a029a45639cd7531365f4f 127 SUPERFAMILY SSF55874 33 112 4.71E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APRE_RS01920 5846ebffe61765059dad626b318d9b41 123 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 122 1.1E-46 T 20-04-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 APRE_RS01920 5846ebffe61765059dad626b318d9b41 123 Gene3D G3DSA:3.40.30.10 73 98 8.3E-4 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 SUPERFAMILY SSF55681 1 280 1.82E-123 T 20-04-2016 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 288 1.2E-141 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.0E-60 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.0E-60 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.0E-60 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.0E-60 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.0E-60 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.0E-60 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 Gene3D G3DSA:1.20.58.180 205 286 1.1E-31 T 20-04-2016 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 PANTHER PTHR30075 1 292 1.0E-196 T 20-04-2016 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 55.356 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 8.6E-141 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APRE_RS01810 f222848bae5f02e16a8bb0a2c0582ba3 293 Gene3D G3DSA:3.30.930.10 1 203 3.0E-94 T 20-04-2016 APRE_RS05825 eea67dcfe92cbac17612f781fef68024 150 SUPERFAMILY SSF46785 20 144 8.39E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05825 eea67dcfe92cbac17612f781fef68024 150 Pfam PF01475 Ferric uptake regulator family 27 127 2.8E-28 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APRE_RS05825 eea67dcfe92cbac17612f781fef68024 150 Gene3D G3DSA:1.10.10.10 19 97 1.2E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS05825 eea67dcfe92cbac17612f781fef68024 150 PANTHER PTHR33202:SF7 4 150 8.6E-38 T 20-04-2016 APRE_RS05825 eea67dcfe92cbac17612f781fef68024 150 PANTHER PTHR33202 4 150 8.6E-38 T 20-04-2016 APRE_RS04790 cfb49fba64e5601b3d59154093def7d6 86 Pfam PF06135 Bacterial protein of unknown function (DUF965) 8 85 5.6E-35 T 20-04-2016 IPR009309 Uncharacterised protein family UPF0297 APRE_RS04790 cfb49fba64e5601b3d59154093def7d6 86 PANTHER PTHR40067 5 86 4.1E-30 T 20-04-2016 APRE_RS04790 cfb49fba64e5601b3d59154093def7d6 86 PIRSF PIRSF037258 4 86 6.3E-35 T 20-04-2016 IPR009309 Uncharacterised protein family UPF0297 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 SUPERFAMILY SSF55174 65 124 1.57E-23 T 20-04-2016 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 SUPERFAMILY SSF55174 176 249 1.57E-23 T 20-04-2016 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 PANTHER PTHR32219:SF5 12 255 2.9E-29 T 20-04-2016 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 SMART SM00363 179 239 2.5E-14 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 PANTHER PTHR32219 12 255 2.9E-29 T 20-04-2016 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 Pfam PF01479 S4 domain 180 224 6.7E-12 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS04705 fa299403b0c8287042542e9d6602ea8a 255 Gene3D G3DSA:3.10.290.10 177 233 5.0E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APRE_RS03750 34f02f277ee546a75a6aa706fd814b06 271 Pfam PF01774 UreD urease accessory protein 48 250 8.9E-28 T 20-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APRE_RS03750 34f02f277ee546a75a6aa706fd814b06 271 Hamap MF_01384 Urease accessory protein UreD [ureD]. 7 263 17.713 T 20-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APRE_RS03750 34f02f277ee546a75a6aa706fd814b06 271 PANTHER PTHR33643:SF1 10 220 1.8E-26 T 20-04-2016 APRE_RS03750 34f02f277ee546a75a6aa706fd814b06 271 PANTHER PTHR33643 10 220 1.8E-26 T 20-04-2016 APRE_RS00160 5d2614aa29cf7121dc87eedc98dbb0bc 323 Pfam PF14020 Protein of unknown function (DUF4236) 4 56 1.7E-19 T 20-04-2016 IPR025330 Domain of unknown function DUF4236 APRE_RS05520 3542c3360571d3a26f2506d6815f934a 128 PANTHER PTHR38594 1 126 5.1E-26 T 20-04-2016 APRE_RS05520 3542c3360571d3a26f2506d6815f934a 128 SUPERFAMILY SSF53062 1 124 2.62E-28 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS05520 3542c3360571d3a26f2506d6815f934a 128 Gene3D G3DSA:3.40.50.510 1 123 2.5E-34 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS05520 3542c3360571d3a26f2506d6815f934a 128 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 3 119 9.8E-31 T 20-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain APRE_RS05520 3542c3360571d3a26f2506d6815f934a 128 Pfam PF03610 PTS system fructose IIA component 4 113 1.0E-18 T 20-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APRE_RS05520 3542c3360571d3a26f2506d6815f934a 128 PANTHER PTHR38594:SF1 1 126 5.1E-26 T 20-04-2016 APRE_RS06215 894234c7e40ea5eac8e843ff55344aa5 458 Pfam PF15615 TerB-C domain 306 451 3.8E-26 T 20-04-2016 IPR028932 TerB-C domain APRE_RS08700 bdc0bd05c298a5119581a47f1067f26d 158 Pfam PF06271 RDD family 17 139 9.6E-17 T 20-04-2016 IPR010432 RDD APRE_RS08700 bdc0bd05c298a5119581a47f1067f26d 158 PANTHER PTHR36115 1 147 2.4E-19 T 20-04-2016 APRE_RS08700 bdc0bd05c298a5119581a47f1067f26d 158 PANTHER PTHR36115:SF3 1 147 2.4E-19 T 20-04-2016 APRE_RS00120 f19c3ecd8fdfb3b0f147a28feaead2f9 87 Pfam PF06803 Protein of unknown function (DUF1232) 27 63 1.9E-11 T 20-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 APRE_RS09425 d7f8f8cd3dc00e3870c33e8db5989c43 300 Gene3D G3DSA:3.40.50.1820 38 299 2.1E-35 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS09425 d7f8f8cd3dc00e3870c33e8db5989c43 300 Pfam PF07859 alpha/beta hydrolase fold 70 263 6.5E-16 T 20-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APRE_RS09425 d7f8f8cd3dc00e3870c33e8db5989c43 300 PANTHER PTHR23024 55 300 3.7E-22 T 20-04-2016 APRE_RS09425 d7f8f8cd3dc00e3870c33e8db5989c43 300 SUPERFAMILY SSF53474 34 300 5.3E-32 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APRE_RS04645 3346a942248b9cb01b02238597006655 89 Pfam PF02699 Preprotein translocase subunit 6 82 1.3E-13 T 20-04-2016 IPR003849 Preprotein translocase YajC APRE_RS04645 3346a942248b9cb01b02238597006655 89 SMART SM01323 1 85 7.5E-4 T 20-04-2016 IPR003849 Preprotein translocase YajC APRE_RS08720 5bea8625440fcd24267e1c126cda18d7 248 Gene3D G3DSA:3.40.50.7700 116 244 7.2E-26 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS08720 5bea8625440fcd24267e1c126cda18d7 248 Pfam PF00731 AIR carboxylase 117 243 2.3E-17 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS08720 5bea8625440fcd24267e1c126cda18d7 248 PANTHER PTHR23046 1 248 3.6E-99 T 20-04-2016 APRE_RS08720 5bea8625440fcd24267e1c126cda18d7 248 PANTHER PTHR23046:SF3 1 248 3.6E-99 T 20-04-2016 APRE_RS08720 5bea8625440fcd24267e1c126cda18d7 248 SMART SM01001 115 247 1.1E-35 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS08720 5bea8625440fcd24267e1c126cda18d7 248 SUPERFAMILY SSF52255 116 246 2.62E-29 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APRE_RS05095 89b13311e9dcbea2da5367baed0b28b2 171 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 7 164 1.1E-39 T 20-04-2016 IPR030949 ECF transporter S component, folate family APRE_RS05095 89b13311e9dcbea2da5367baed0b28b2 171 Pfam PF12822 Protein of unknown function (DUF3816) 9 163 3.1E-18 T 20-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 APRE_RS02450 dcab46eb5dc55f9e92e11c7b1ec3058d 220 Gene3D G3DSA:3.40.50.300 2 209 2.6E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02450 dcab46eb5dc55f9e92e11c7b1ec3058d 220 PANTHER PTHR24220 7 209 1.7E-61 T 20-04-2016 APRE_RS02450 dcab46eb5dc55f9e92e11c7b1ec3058d 220 SUPERFAMILY SSF52540 3 209 3.37E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APRE_RS02450 dcab46eb5dc55f9e92e11c7b1ec3058d 220 Pfam PF00005 ABC transporter 21 160 3.2E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APRE_RS02450 dcab46eb5dc55f9e92e11c7b1ec3058d 220 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APRE_RS02450 dcab46eb5dc55f9e92e11c7b1ec3058d 220 SMART SM00382 30 209 9.7E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 58 1.2E-15 T 20-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 3 59 10.749 T 20-04-2016 IPR022943 Preprotein translocase subunit SecE APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 PRINTS PR01650 Bacterial translocase SecE signature 2 22 5.9E-5 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 PRINTS PR01650 Bacterial translocase SecE signature 26 46 5.9E-5 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 PRINTS PR01650 Bacterial translocase SecE signature 46 60 5.9E-5 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 7 59 8.4E-16 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APRE_RS05855 e35b8dfdc18f86dfe5c6c097301b1249 60 Gene3D G3DSA:1.20.5.1030 3 60 1.4E-18 T 20-04-2016 APRE_RS00445 4838bf0e94e8608888ca8e1083a0141e 108 Gene3D G3DSA:1.20.120.20 25 91 3.5E-4 T 20-04-2016 APRE_RS01865 4524d025ebaee946069cc3b5fe531f28 279 SMART SM01252 16 145 5.6E-54 T 20-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding APRE_RS01865 4524d025ebaee946069cc3b5fe531f28 279 Pfam PF04383 KilA-N domain 22 144 1.4E-23 T 20-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding APRE_RS09165 651b769daeaf49607ab8c1a09d9532f9 91 Gene3D G3DSA:3.90.1510.10 11 91 2.6E-19 T 20-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APRE_RS09165 651b769daeaf49607ab8c1a09d9532f9 91 PANTHER PTHR21599:SF0 7 91 2.2E-18 T 20-04-2016 APRE_RS09165 651b769daeaf49607ab8c1a09d9532f9 91 PANTHER PTHR21599 7 91 2.2E-18 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS09165 651b769daeaf49607ab8c1a09d9532f9 91 Pfam PF02595 Glycerate kinase family 7 91 1.8E-20 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS09165 651b769daeaf49607ab8c1a09d9532f9 91 SUPERFAMILY SSF110738 5 91 9.42E-22 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APRE_RS03370 04f230b24f9f43651b33a88b293f91e4 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 434 1.3E-77 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS03370 04f230b24f9f43651b33a88b293f91e4 462 Pfam PF01554 MatE 24 183 1.3E-34 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS03370 04f230b24f9f43651b33a88b293f91e4 462 Pfam PF01554 MatE 257 419 1.9E-29 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS03370 04f230b24f9f43651b33a88b293f91e4 462 PIRSF PIRSF006603 1 461 4.8E-117 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APRE_RS03370 04f230b24f9f43651b33a88b293f91e4 462 PANTHER PTHR11206 1 458 3.4E-105 T 20-04-2016 APRE_RS03370 04f230b24f9f43651b33a88b293f91e4 462 PANTHER PTHR11206:SF132 1 458 3.4E-105 T 20-04-2016 APRE_RS04340 a1595116fa760b402569e5420d7bf0b8 337 Pfam PF11863 Protein of unknown function (DUF3383) 72 280 3.6E-19 T 20-04-2016 IPR021808 Protein of unknown function DUF3383 APRE_RS08810 777b123fe5c7d4a044fac3a2780fc701 170 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 72 4.2E-7 T 20-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 APRE_RS08810 777b123fe5c7d4a044fac3a2780fc701 170 Pfam PF04961 Formiminotransferase-cyclodeaminase 50 150 7.3E-7 T 20-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 APRE_RS08810 777b123fe5c7d4a044fac3a2780fc701 170 SUPERFAMILY SSF101262 3 163 7.19E-17 T 20-04-2016 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00379 APRE_RS04805 9498f6c697b81eb136c810156ef0deb0 145 Pfam PF01475 Ferric uptake regulator family 13 133 1.2E-29 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APRE_RS04805 9498f6c697b81eb136c810156ef0deb0 145 SUPERFAMILY SSF46785 5 139 3.02E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04805 9498f6c697b81eb136c810156ef0deb0 145 PANTHER PTHR33202 1 144 5.9E-37 T 20-04-2016 APRE_RS04805 9498f6c697b81eb136c810156ef0deb0 145 Gene3D G3DSA:1.10.10.10 4 84 9.9E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS08330 3ba90d7006013b46c4964b1a8064260b 81 Gene3D G3DSA:3.40.30.10 1 76 2.0E-4 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS06470 a7b917660e46983a3880ba350eb31c1a 491 Gene3D G3DSA:1.20.1570.10 281 338 6.6E-46 T 20-04-2016 APRE_RS06470 a7b917660e46983a3880ba350eb31c1a 491 Gene3D G3DSA:1.20.1570.10 206 244 6.6E-46 T 20-04-2016 APRE_RS06470 a7b917660e46983a3880ba350eb31c1a 491 Pfam PF08903 Domain of unknown function (DUF1846) 4 483 9.0E-227 T 20-04-2016 IPR014999 Uncharacterised protein family UPF0371 APRE_RS06470 a7b917660e46983a3880ba350eb31c1a 491 Gene3D G3DSA:3.10.630.10 251 280 1.0E-112 T 20-04-2016 APRE_RS06470 a7b917660e46983a3880ba350eb31c1a 491 Gene3D G3DSA:3.10.630.10 2 205 1.0E-112 T 20-04-2016 APRE_RS04285 051306f9b6620c512c18b8febfbb6988 412 Pfam PF03237 Terminase-like family 30 392 5.1E-22 T 20-04-2016 IPR004921 Terminase, large subunit APRE_RS04285 051306f9b6620c512c18b8febfbb6988 412 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 26 393 2.7E-43 T 20-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 APRE_RS03435 5188f934d6bed43de0747f347059008a 74 Pfam PF00550 Phosphopantetheine attachment site 4 68 7.0E-13 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APRE_RS03435 5188f934d6bed43de0747f347059008a 74 SUPERFAMILY SSF47336 2 73 1.96E-16 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APRE_RS03435 5188f934d6bed43de0747f347059008a 74 Gene3D G3DSA:1.10.1200.10 2 73 1.2E-18 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APRE_RS03435 5188f934d6bed43de0747f347059008a 74 Hamap MF_01217 Acyl carrier protein [acpP]. 1 74 15.302 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APRE_RS03635 fce0b45b61a9e9413390966b92bf4b43 201 TIGRFAM TIGR00779 cad: cadmium resistance transporter family protein 12 199 2.7E-56 T 20-04-2016 IPR004676 Cadmium resistance transporter APRE_RS03635 fce0b45b61a9e9413390966b92bf4b43 201 Pfam PF03596 Cadmium resistance transporter 11 197 3.9E-60 T 20-04-2016 IPR004676 Cadmium resistance transporter APRE_RS08450 b49785b958745d3f1b37714a8e4fd597 143 Pfam PF11457 Protein of unknown function (DUF3021) 4 141 5.4E-27 T 20-04-2016 IPR021560 Protein of unknown function DUF3021 APRE_RS00655 c0fcfe6766ac50d21d367c157d5f92b9 441 Gene3D G3DSA:3.40.190.10 52 176 5.2E-11 T 20-04-2016 APRE_RS00655 c0fcfe6766ac50d21d367c157d5f92b9 441 SUPERFAMILY SSF53850 37 414 3.02E-26 T 20-04-2016 APRE_RS00655 c0fcfe6766ac50d21d367c157d5f92b9 441 Gene3D G3DSA:3.40.190.10 214 359 2.1E-7 T 20-04-2016 APRE_RS00530 77907508b46c413c4c2e437063a60b3d 179 PANTHER PTHR33567 1 179 2.3E-56 T 20-04-2016 APRE_RS00530 77907508b46c413c4c2e437063a60b3d 179 Pfam PF02417 Chromate transporter 5 170 1.2E-44 T 20-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 APRE_RS05195 49d6c3f82e33af0b0cbf094f4e77b348 326 Pfam PF01992 ATP synthase (C/AC39) subunit 7 304 3.8E-26 T 20-04-2016 IPR002843 ATPase, V0 complex, c/d subunit APRE_RS05195 49d6c3f82e33af0b0cbf094f4e77b348 326 SUPERFAMILY SSF103486 8 266 3.92E-18 T 20-04-2016 IPR002843 ATPase, V0 complex, c/d subunit APRE_RS02740 70b3ace1e0e7ae205f7777bd195960da 240 PANTHER PTHR30283:SF3 2 237 1.1E-49 T 20-04-2016 APRE_RS02740 70b3ace1e0e7ae205f7777bd195960da 240 Pfam PF03883 Protein of unknown function (DUF328) 1 225 4.7E-59 T 20-04-2016 IPR005583 Peroxide stress protein YaaA APRE_RS02740 70b3ace1e0e7ae205f7777bd195960da 240 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 238 24.46 T 20-04-2016 IPR005583 Peroxide stress protein YaaA APRE_RS02740 70b3ace1e0e7ae205f7777bd195960da 240 PANTHER PTHR30283 2 237 1.1E-49 T 20-04-2016 APRE_RS02095 0db674afd6dd43dd89ce6341b97212f9 272 PANTHER PTHR30465 1 268 1.9E-84 T 20-04-2016 APRE_RS02095 0db674afd6dd43dd89ce6341b97212f9 272 Gene3D G3DSA:1.10.3720.10 62 263 8.6E-27 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02095 0db674afd6dd43dd89ce6341b97212f9 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 2.1E-26 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02095 0db674afd6dd43dd89ce6341b97212f9 272 SUPERFAMILY SSF161098 71 252 4.97E-27 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS02095 0db674afd6dd43dd89ce6341b97212f9 272 PANTHER PTHR30465:SF10 1 268 1.9E-84 T 20-04-2016 APRE_RS04295 98ccdd790a1b73ce307b392c825c2da1 261 Pfam PF04233 Phage Mu protein F like protein 142 254 8.7E-20 T 20-04-2016 IPR006528 Phage head morphogenesis domain APRE_RS08795 936bca654d14ffd6c39250e57d68519d 288 Pfam PF07556 Protein of unknown function (DUF1538) 32 235 5.3E-51 T 20-04-2016 IPR011435 Protein of unknown function DUF1538 APRE_RS04495 4a29499bfb04ff99ebb900d5471aa24c 277 Pfam PF00849 RNA pseudouridylate synthase 83 225 3.5E-27 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS04495 4a29499bfb04ff99ebb900d5471aa24c 277 PANTHER PTHR11079 51 257 2.3E-42 T 20-04-2016 APRE_RS04495 4a29499bfb04ff99ebb900d5471aa24c 277 SUPERFAMILY SSF55120 68 268 1.28E-49 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS04495 4a29499bfb04ff99ebb900d5471aa24c 277 PANTHER PTHR11079:SF73 51 257 2.3E-42 T 20-04-2016 APRE_RS04495 4a29499bfb04ff99ebb900d5471aa24c 277 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 121 135 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APRE_RS00850 adcc0ad098a1ae15c8e42662c040c625 181 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 10 173 2.1E-52 T 20-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 APRE_RS00850 adcc0ad098a1ae15c8e42662c040c625 181 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 176 5.8E-49 T 20-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 APRE_RS00850 adcc0ad098a1ae15c8e42662c040c625 181 PANTHER PTHR41316 2 181 1.5E-37 T 20-04-2016 APRE_RS04720 8b3df008aeac783b378863b391ca0a50 301 SUPERFAMILY SSF53098 14 178 4.34E-19 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS04720 8b3df008aeac783b378863b391ca0a50 301 Gene3D G3DSA:3.30.420.10 19 187 6.3E-13 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS04720 8b3df008aeac783b378863b391ca0a50 301 Pfam PF13482 RNase_H superfamily 18 177 3.2E-21 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APRE_RS01460 fa0911a8e3b87ddec301b2edeabae326 343 Gene3D G3DSA:1.20.5.420 140 198 3.3E-6 T 20-04-2016 APRE_RS03295 279e12dc6517fa4df50e99ae50bcd635 209 PANTHER PTHR33498:SF1 101 208 1.6E-18 T 20-04-2016 APRE_RS03295 279e12dc6517fa4df50e99ae50bcd635 209 Pfam PF01610 Transposase 29 206 2.4E-28 T 20-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain APRE_RS03295 279e12dc6517fa4df50e99ae50bcd635 209 PANTHER PTHR33498 101 208 1.6E-18 T 20-04-2016 APRE_RS07490 cd1af12e953d751d669a0ddb700ba2f1 75 SMART SM00899 2 74 3.1E-19 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APRE_RS07490 cd1af12e953d751d669a0ddb700ba2f1 75 SUPERFAMILY SSF50037 6 74 9.16E-20 T 20-04-2016 IPR008988 Transcriptional repressor, C-terminal APRE_RS07490 cd1af12e953d751d669a0ddb700ba2f1 75 Pfam PF04023 FeoA domain 3 73 3.3E-14 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APRE_RS07490 cd1af12e953d751d669a0ddb700ba2f1 75 PANTHER PTHR33238 3 75 6.8E-17 T 20-04-2016 APRE_RS04245 b5d24a64e187b95974b8c5049141a2b5 124 Gene3D G3DSA:1.10.287.1080 1 104 9.4E-9 T 20-04-2016 APRE_RS04245 b5d24a64e187b95974b8c5049141a2b5 124 SUPERFAMILY SSF101386 1 111 1.1E-10 T 20-04-2016 APRE_RS07830 9096fd05c976a04c7ca0c4cf7bca8f62 334 Pfam PF13303 Phosphotransferase system, EIIC 19 332 3.7E-114 T 20-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APRE_RS07830 9096fd05c976a04c7ca0c4cf7bca8f62 334 PANTHER PTHR41320 6 334 2.4E-70 T 20-04-2016 APRE_RS00675 e218af9f0f6561de02894f68deb7e74e 297 SUPERFAMILY SSF161098 23 297 1.4E-57 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00675 e218af9f0f6561de02894f68deb7e74e 297 PANTHER PTHR32243:SF34 26 297 6.0E-83 T 20-04-2016 APRE_RS00675 e218af9f0f6561de02894f68deb7e74e 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 282 6.6E-16 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00675 e218af9f0f6561de02894f68deb7e74e 297 Gene3D G3DSA:1.10.3720.10 26 283 1.4E-55 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APRE_RS00675 e218af9f0f6561de02894f68deb7e74e 297 PANTHER PTHR32243 26 297 6.0E-83 T 20-04-2016 APRE_RS08725 d659fae9b85a56dd4f0c09ada5aa22e9 293 Pfam PF01969 Protein of unknown function DUF111 3 285 2.6E-81 T 20-04-2016 IPR002822 Uncharacterised protein family UPF0272 APRE_RS08725 d659fae9b85a56dd4f0c09ada5aa22e9 293 PANTHER PTHR36566 1 65 6.1E-48 T 20-04-2016 APRE_RS08725 d659fae9b85a56dd4f0c09ada5aa22e9 293 PANTHER PTHR36566 107 288 6.1E-48 T 20-04-2016 APRE_RS08725 d659fae9b85a56dd4f0c09ada5aa22e9 293 PANTHER PTHR36566:SF1 1 65 6.1E-48 T 20-04-2016 APRE_RS08725 d659fae9b85a56dd4f0c09ada5aa22e9 293 PANTHER PTHR36566:SF1 107 288 6.1E-48 T 20-04-2016 APRE_RS04290 6f8ee1c93185af35a0b681547f0a8025 489 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 27 448 2.7E-72 T 20-04-2016 IPR006428 Portal protein, SPP1-type APRE_RS04290 6f8ee1c93185af35a0b681547f0a8025 489 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 33 451 3.3E-83 T 20-04-2016 IPR021145 Portal protein, SPP1 Gp6-like APRE_RS06400 3007b954d08f108933cba30f62082649 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 166 6.5E-21 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS06400 3007b954d08f108933cba30f62082649 171 Pfam PF08281 Sigma-70, region 4 117 163 1.2E-8 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS06400 3007b954d08f108933cba30f62082649 171 SUPERFAMILY SSF88946 9 70 5.76E-6 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS06400 3007b954d08f108933cba30f62082649 171 Gene3D G3DSA:1.10.10.10 105 167 1.1E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS06400 3007b954d08f108933cba30f62082649 171 SUPERFAMILY SSF88659 84 168 1.66E-12 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS02945 f71407966ed853a558a6cfd895f7a7c6 476 Pfam PF07373 CAMP factor (Cfa) 119 236 8.2E-14 T 20-04-2016 IPR010860 CAMP factor APRE_RS07515 eca711081dc1dcbdadbe94a0935bc08c 150 Pfam PF03780 Asp23 family, cell envelope-related function 22 128 9.3E-29 T 20-04-2016 IPR005531 Alkaline shock protein Asp23 APRE_RS07515 eca711081dc1dcbdadbe94a0935bc08c 150 PANTHER PTHR34297 1 148 3.5E-29 T 20-04-2016 APRE_RS07515 eca711081dc1dcbdadbe94a0935bc08c 150 PANTHER PTHR34297:SF1 1 148 3.5E-29 T 20-04-2016 APRE_RS08830 528b578f17371b733c17495b5fff699f 237 Pfam PF02517 CAAX protease self-immunity 120 205 1.7E-18 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 APRE_RS08830 528b578f17371b733c17495b5fff699f 237 PANTHER PTHR10794:SF37 73 207 1.3E-12 T 20-04-2016 APRE_RS08830 528b578f17371b733c17495b5fff699f 237 PANTHER PTHR10794 73 207 1.3E-12 T 20-04-2016 APRE_RS00880 c379f19c4dc3b7d3a4258b25433241b2 297 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 294 2.1E-52 T 20-04-2016 IPR005218 Diacylglycerol/lipid kinase APRE_RS00880 c379f19c4dc3b7d3a4258b25433241b2 297 PANTHER PTHR12358 7 293 6.7E-47 T 20-04-2016 APRE_RS00880 c379f19c4dc3b7d3a4258b25433241b2 297 PANTHER PTHR12358:SF41 7 293 6.7E-47 T 20-04-2016 APRE_RS00880 c379f19c4dc3b7d3a4258b25433241b2 297 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 1.2E-28 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APRE_RS00880 c379f19c4dc3b7d3a4258b25433241b2 297 SUPERFAMILY SSF111331 1 293 2.13E-63 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APRE_RS00880 c379f19c4dc3b7d3a4258b25433241b2 297 SMART SM00046 3 129 3.9E-5 T 20-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APRE_RS01415 55102aa677be59439b6e57d078ece8a5 84 SUPERFAMILY SSF143120 8 73 1.7E-6 T 20-04-2016 APRE_RS00715 c65c6a20b978bd7a1e814e432841e44a 442 PIRSF PIRSF005700 1 442 8.5E-173 T 20-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 APRE_RS00715 c65c6a20b978bd7a1e814e432841e44a 442 SUPERFAMILY SSF54001 2 440 6.32E-132 T 20-04-2016 APRE_RS00715 c65c6a20b978bd7a1e814e432841e44a 442 Pfam PF03051 Peptidase C1-like family 2 438 8.0E-188 T 20-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 APRE_RS00715 c65c6a20b978bd7a1e814e432841e44a 442 PANTHER PTHR10363 2 442 2.0E-205 T 20-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 APRE_RS00715 c65c6a20b978bd7a1e814e432841e44a 442 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 61 72 - T 20-04-2016 IPR000169 Cysteine peptidase, cysteine active site APRE_RS00715 c65c6a20b978bd7a1e814e432841e44a 442 Gene3D G3DSA:3.90.70.10 49 441 2.3E-174 T 20-04-2016 APRE_RS02675 2225eb26c42b8238c089ecdbb559b68d 170 SUPERFAMILY SSF52309 1 106 3.05E-16 T 20-04-2016 APRE_RS02675 2225eb26c42b8238c089ecdbb559b68d 170 Gene3D G3DSA:3.40.50.1810 1 165 4.1E-41 T 20-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 APRE_RS02675 2225eb26c42b8238c089ecdbb559b68d 170 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 3 106 2.2E-12 T 20-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 APRE_RS03800 c43674255b3da449a39ae415e41d8551 133 Pfam PF08797 HIRAN domain 35 130 9.5E-16 T 20-04-2016 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 APRE_RS03800 c43674255b3da449a39ae415e41d8551 133 SMART SM00910 33 132 6.3E-12 T 20-04-2016 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 APRE_RS02230 8683b762bb79decf77811bc792336eba 273 Gene3D G3DSA:3.90.550.10 6 271 6.9E-57 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS02230 8683b762bb79decf77811bc792336eba 273 Pfam PF01501 Glycosyl transferase family 8 5 252 5.4E-30 T 20-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 APRE_RS02230 8683b762bb79decf77811bc792336eba 273 SUPERFAMILY SSF53448 6 269 1.52E-53 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APRE_RS05800 42bb4c51ca5c1e2b3fd7e81851cb330b 438 Pfam PF13200 Putative glycosyl hydrolase domain 108 432 2.0E-116 T 20-04-2016 IPR025275 Putative glycosyl hydrolase domain DUF4015 APRE_RS05800 42bb4c51ca5c1e2b3fd7e81851cb330b 438 SUPERFAMILY SSF51445 112 190 3.51E-9 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS05800 42bb4c51ca5c1e2b3fd7e81851cb330b 438 SUPERFAMILY SSF51445 223 432 3.51E-9 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS05800 42bb4c51ca5c1e2b3fd7e81851cb330b 438 SUPERFAMILY SSF51445 156 302 7.42E-12 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APRE_RS05530 bb4ba27515d32c069b507d33eb9704a1 103 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 88 3.3E-10 T 20-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APRE_RS05530 bb4ba27515d32c069b507d33eb9704a1 103 SUPERFAMILY SSF52833 11 91 4.88E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS05530 bb4ba27515d32c069b507d33eb9704a1 103 Gene3D G3DSA:3.40.30.10 19 92 1.5E-15 T 20-04-2016 IPR012336 Thioredoxin-like fold APRE_RS01855 e1fe904c792ab82952a7bce2240ec4ec 234 Pfam PF13643 Domain of unknown function (DUF4145) 110 197 3.0E-18 T 20-04-2016 IPR025285 Domain of unknown function DUF4145 APRE_RS03255 da89863da74a6e74d102594de3ec260d 105 Pfam PF04977 Septum formation initiator 38 100 1.7E-9 T 20-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APRE_RS05100 f6a694e11cea84ede8225282318464fc 276 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 38 163 1.1E-30 T 20-04-2016 IPR007621 TPM domain APRE_RS05100 f6a694e11cea84ede8225282318464fc 276 PANTHER PTHR30373 7 265 4.3E-30 T 20-04-2016 APRE_RS00125 ed3e5bc0de1804d0f6a14175ada7149b 392 Gene3D G3DSA:2.40.420.10 14 100 2.8E-26 T 20-04-2016 APRE_RS00125 ed3e5bc0de1804d0f6a14175ada7149b 392 Gene3D G3DSA:3.40.50.10690 116 358 1.2E-85 T 20-04-2016 APRE_RS07635 0ea0a512cc8022b70bc6639413d30ae3 610 Pfam PF05738 Cna protein B-type domain 457 528 1.4E-8 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07635 0ea0a512cc8022b70bc6639413d30ae3 610 Pfam PF05738 Cna protein B-type domain 328 414 2.0E-10 T 20-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain APRE_RS07635 0ea0a512cc8022b70bc6639413d30ae3 610 PANTHER PTHR36108:SF2 243 345 5.9E-15 T 20-04-2016 APRE_RS07635 0ea0a512cc8022b70bc6639413d30ae3 610 PANTHER PTHR36108:SF2 364 541 5.9E-15 T 20-04-2016 APRE_RS07635 0ea0a512cc8022b70bc6639413d30ae3 610 PANTHER PTHR36108 243 345 5.9E-15 T 20-04-2016 APRE_RS07635 0ea0a512cc8022b70bc6639413d30ae3 610 PANTHER PTHR36108 364 541 5.9E-15 T 20-04-2016 APRE_RS03270 4c84f661c83624e778b04fc65e71b841 163 Pfam PF06173 Protein of unknown function (DUF986) 9 159 7.4E-34 T 20-04-2016 IPR009328 Protein of unknown function DUF986 APRE_RS07580 3afa52656b5033ea5ec8308bbd3e8e7e 123 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 89 122 3.6E-5 T 20-04-2016 IPR011723 Zinc finger/thioredoxin putative APRE_RS01680 7778490868039bf004bbf20e01f9130f 91 Pfam PF14542 GCN5-related N-acetyl-transferase 16 88 8.4E-23 T 20-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APRE_RS01680 7778490868039bf004bbf20e01f9130f 91 SUPERFAMILY SSF55729 15 88 2.27E-19 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01680 7778490868039bf004bbf20e01f9130f 91 Gene3D G3DSA:3.40.630.30 2 88 3.9E-28 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APRE_RS01770 ec29c0247c075a9f9bcbf9f3ae899bcf 206 Pfam PF01957 NfeD-like C-terminal, partner-binding 59 205 3.3E-14 T 20-04-2016 IPR002810 NfeD-like, C-terminal domain APRE_RS00580 696eab9ae8ce9af5e0ee44e6ad1320ec 394 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 52 377 6.6E-93 T 20-04-2016 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit APRE_RS01960 58c41001f01d705d79867365ca43804c 267 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 6 260 6.3E-103 T 20-04-2016 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family APRE_RS08085 ae318fc99534d05f17e39bc636a4d22c 258 Pfam PF06541 Putative ABC-transporter type IV 9 162 1.5E-45 T 20-04-2016 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 APRE_RS03625 da1c29c8f7ebe149cbd02fb4fbfdadbd 159 Pfam PF04324 BFD-like [2Fe-2S] binding domain 97 136 6.2E-6 T 20-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APRE_RS08790 561e990ce088d088f2419ff856b05660 101 SUPERFAMILY SSF54913 37 99 4.52E-5 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APRE_RS04435 f1a37163a10183cb3c02ab2722a6ae3f 68 Pfam PF16938 Putative phage holin Dp-1 5 65 1.5E-24 T 20-04-2016 IPR031612 Putative phage holin APRE_RS01455 54f4fc9cdf44803a49e69258768a9d69 177 Gene3D G3DSA:1.20.5.420 45 110 7.8E-7 T 20-04-2016 APRE_RS08245 5754e6753015a641ceece86e056d8e97 543 Pfam PF13320 Domain of unknown function (DUF4091) 409 474 2.3E-15 T 20-04-2016 IPR025150 Domain of unknown function DUF4091 APRE_RS04315 cac8471fd0e7eee0a19b577139f3f384 70 Gene3D G3DSA:1.10.720.10 35 67 6.1E-5 T 20-04-2016 APRE_RS00985 c818d890e945e17cc79db641fe83bfa4 210 Pfam PF13346 ABC-2 family transporter protein 4 205 8.6E-30 T 20-04-2016 IPR025699 ABC-2 membrane transporter-like APRE_RS05255 976832d8457e27390eebaae19d9b3d6b 278 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APRE_RS05255 976832d8457e27390eebaae19d9b3d6b 278 Gene3D G3DSA:1.10.600.10 9 224 3.4E-55 T 20-04-2016 IPR008949 Isoprenoid synthase domain APRE_RS05255 976832d8457e27390eebaae19d9b3d6b 278 PANTHER PTHR12001 18 223 3.1E-46 T 20-04-2016 IPR017446 Polyprenyl synthetase-related APRE_RS05255 976832d8457e27390eebaae19d9b3d6b 278 Pfam PF00348 Polyprenyl synthetase 33 224 1.2E-37 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APRE_RS05255 976832d8457e27390eebaae19d9b3d6b 278 SUPERFAMILY SSF48576 11 274 6.0E-52 T 20-04-2016 IPR008949 Isoprenoid synthase domain APRE_RS07280 d04da417d3bec24faf0aca52c03c8361 264 PANTHER PTHR33514 1 261 1.1E-95 T 20-04-2016 APRE_RS07280 d04da417d3bec24faf0aca52c03c8361 264 Pfam PF02361 Cobalt transport protein 14 233 1.5E-47 T 20-04-2016 IPR003339 ABC/ECF transporter, transmembrane component APRE_RS07280 d04da417d3bec24faf0aca52c03c8361 264 PANTHER PTHR33514:SF2 1 261 1.1E-95 T 20-04-2016 APRE_RS03545 e4834a525c64c7b7ba33c1bc3e466612 278 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 33 236 5.2E-33 T 20-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system APRE_RS00805 fe508965ab59fbdc31d1cea8f068ef38 116 Pfam PF13630 SdpI/YhfL protein family 33 99 2.7E-9 T 20-04-2016 IPR025962 SdpI/YhfL protein family APRE_RS01590 84d13bd4d3cab7e87b97186e56356850 132 Pfam PF03477 ATP cone domain 45 129 5.1E-12 T 20-04-2016 IPR005144 ATP-cone domain APRE_RS08465 c1f8209290a27325841a74f06842be38 233 Pfam PF11368 Protein of unknown function (DUF3169) 3 222 9.3E-23 T 20-04-2016 IPR021509 Protein of unknown function DUF3169 APRE_RS01730 c07e89fd156f2edb4a806614d5766d66 579 SUPERFAMILY SSF53795 344 561 1.69E-17 T 20-04-2016 APRE_RS01245 ed9cb3fcaaa000c2aa6f2ab14f0aeb09 179 Pfam PF06114 Domain of unknown function (DUF955) 29 149 5.7E-13 T 20-04-2016 IPR010359 HTH domain, IrrE-type APRE_RS04420 0d1259d5f9584a57d74680369ffdcf47 290 SUPERFAMILY SSF69349 8 286 1.18E-67 T 20-04-2016 APRE_RS04155 406c1a12141aef53403ca22db121ae73 155 Pfam PF05565 Siphovirus Gp157 2 155 4.8E-45 T 20-04-2016 IPR008840 Siphovirus Gp157 APRE_RS08410 648da4729164711047602947c2e44c22 177 PANTHER PTHR34547 8 177 2.6E-28 T 20-04-2016 APRE_RS08410 648da4729164711047602947c2e44c22 177 Pfam PF05991 YacP-like NYN domain 10 165 2.5E-40 T 20-04-2016 IPR010298 Protein of unknown function DUF901 APRE_RS01740 1affaed1bcc0474a1e20b0528a6006c3 227 Pfam PF03591 AzlC protein 14 152 7.3E-38 T 20-04-2016 IPR011606 Branched-chain amino acid transport, permease APRE_RS01740 1affaed1bcc0474a1e20b0528a6006c3 227 PANTHER PTHR34979 1 227 1.1E-41 T 20-04-2016 APRE_RS08600 8c7ebeff1523557c00a900c5e158b844 106 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 50 104 1.1E-11 T 20-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 APRE_RS04305 5d2f1aaaf13a973f95228d25562590e9 199 Pfam PF14265 Domain of unknown function (DUF4355) 38 169 3.9E-24 T 20-04-2016 IPR025580 Protein of unknown function DUF4355 APRE_RS01850 54e2bf1acded9d2d2a4746d9048c368b 259 Pfam PF01381 Helix-turn-helix 14 60 5.5E-7 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS01850 54e2bf1acded9d2d2a4746d9048c368b 259 SUPERFAMILY SSF47413 7 47 5.63E-8 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS01850 54e2bf1acded9d2d2a4746d9048c368b 259 SMART SM00530 13 63 2.4E-5 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APRE_RS01850 54e2bf1acded9d2d2a4746d9048c368b 259 Gene3D G3DSA:1.10.260.40 10 60 4.5E-9 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APRE_RS06115 c29e00de71e0cbfdc5b2cd2c51ebdcf6 269 Pfam PF08478 POTRA domain, FtsQ-type 61 127 1.4E-11 T 20-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APRE_RS01380 838bba84b3153e9b357fdb37aa9f3684 141 Pfam PF08239 Bacterial SH3 domain 89 138 1.9E-8 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS01380 838bba84b3153e9b357fdb37aa9f3684 141 SMART SM00287 79 140 0.0027 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APRE_RS00525 a3b39ea369fc00d7b89e9f99398df2bd 178 SUPERFAMILY SSF57884 131 177 8.76E-5 T 20-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APRE_RS00525 a3b39ea369fc00d7b89e9f99398df2bd 178 Gene3D G3DSA:3.40.10.10 135 176 2.1E-4 T 20-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APRE_RS01695 f59e9725c290b0eab7612664f05b212e 180 PANTHER PTHR30509 11 158 7.4E-14 T 20-04-2016 APRE_RS01695 f59e9725c290b0eab7612664f05b212e 180 Pfam PF13515 Fusaric acid resistance protein-like 42 157 2.8E-13 T 20-04-2016 APRE_RS02255 05f8bedc5ab746475621050df3cc4935 125 PANTHER PTHR33217 1 125 6.1E-45 T 20-04-2016 APRE_RS02255 05f8bedc5ab746475621050df3cc4935 125 Pfam PF00872 Transposase, Mutator family 2 104 9.7E-23 T 20-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 APRE_RS01180 28277056d2ce16072aa690f3324265fb 111 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 4 94 1.0E-17 T 20-04-2016 IPR020483 Uncharacterised protein family YgbA APRE_RS01180 28277056d2ce16072aa690f3324265fb 111 Pfam PF11756 Nitrous oxide-stimulated promoter 3 100 1.9E-32 T 20-04-2016 IPR020483 Uncharacterised protein family YgbA APRE_RS01985 4a7a8f41c0e5964b137d8638016dfecc 87 Pfam PF11823 Protein of unknown function (DUF3343) 28 68 2.7E-13 T 20-04-2016 IPR021778 Protein of unknown function DUF3343 APRE_RS06420 e128b62495dc7912f6b2d8964c077368 475 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 55 450 2.0E-26 T 20-04-2016 APRE_RS06420 e128b62495dc7912f6b2d8964c077368 475 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 8 467 6.9E-140 T 20-04-2016 IPR029468 O-antigen polysaccharide polymerase Wzy UniPathway: UPA00934 APRE_RS02005 9c5d1341b102eb361df432b6151ffc5b 311 Pfam PF07949 YbbR-like protein 224 293 3.7E-8 T 20-04-2016 IPR012505 YbbR-like APRE_RS02005 9c5d1341b102eb361df432b6151ffc5b 311 Pfam PF07949 YbbR-like protein 51 124 4.6E-5 T 20-04-2016 IPR012505 YbbR-like APRE_RS02005 9c5d1341b102eb361df432b6151ffc5b 311 PANTHER PTHR37804 1 296 9.6E-23 T 20-04-2016 APRE_RS07820 4b52da83625387e076b8cfb6ed03bed4 325 Pfam PF06207 Protein of unknown function (DUF1002) 34 263 8.4E-54 T 20-04-2016 IPR009343 Protein of unknown function DUF1002 APRE_RS00610 9ae4cd401dae6eca79fee78c386c6be7 567 Pfam PF09972 Predicted membrane protein (DUF2207) 451 506 4.9E-12 T 20-04-2016 IPR018702 Protein of unknown function DUF2207, membrane APRE_RS00610 9ae4cd401dae6eca79fee78c386c6be7 567 Pfam PF09972 Predicted membrane protein (DUF2207) 28 416 8.7E-22 T 20-04-2016 IPR018702 Protein of unknown function DUF2207, membrane APRE_RS01370 eac2e724ef6df285f44b45dcb7f27b44 312 Pfam PF02706 Chain length determinant protein 45 122 3.9E-6 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APRE_RS06385 a33c7ccda47082ce4fa8f3db8b0b4018 72 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 4.2E-18 T 20-04-2016 IPR021321 Protein of unknown function DUF2922 APRE_RS00840 162770d1024691dbacde4b48d676dff3 386 Pfam PF02706 Chain length determinant protein 8 137 1.3E-7 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APRE_RS04260 1e35d20c29796cdbcd09ce1a0e6c40ee 165 Gene3D G3DSA:1.10.10.10 95 148 1.2E-4 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APRE_RS04260 1e35d20c29796cdbcd09ce1a0e6c40ee 165 SUPERFAMILY SSF88659 86 154 1.93E-6 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APRE_RS00440 a3579cea78372a2f83762cbf882b9a47 208 Pfam PF03413 Peptidase propeptide and YPEB domain 153 205 5.4E-6 T 20-04-2016 IPR025711 PepSY domain APRE_RS05275 50418e16373311f2b32daad6d4ca5608 108 Pfam PF03780 Asp23 family, cell envelope-related function 7 105 1.1E-15 T 20-04-2016 IPR005531 Alkaline shock protein Asp23 APRE_RS03155 b125b19c658103c6416b9741c0aea916 103 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 82 2.1E-5 T 20-04-2016 IPR000361 FeS cluster biogenesis