locus-tag class description DO83_RS00060 PF01554 MatE DO83_RS00075 PF01741 Large-conductance mechanosensitive channel, MscL DO83_RS00085 PF06574 FAD synthetase DO83_RS00085 PF01687 Riboflavin kinase DO83_RS00090 PF01509 TruB family pseudouridylate synthase (N terminal domain) DO83_RS00090 PF16198 tRNA pseudouridylate synthase B C-terminal domain DO83_RS00095 PF01368 DHH family DO83_RS00095 PF02272 DHHA1 domain DO83_RS00100 PF02033 Ribosome-binding factor A DO83_RS00105 PF04760 Translation initiation factor IF-2, N-terminal region DO83_RS00105 PF11987 Translation-initiation factor 2 DO83_RS00105 PF00009 Elongation factor Tu GTP binding domain DO83_RS00115 PF04296 Protein of unknown function (DUF448) DO83_RS00120 PF13184 NusA-like KH domain DO83_RS00120 PF08529 NusA N-terminal domain DO83_RS00120 PF00575 S1 RNA binding domain DO83_RS00130 PF02811 PHP domain DO83_RS00130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DO83_RS00130 PF00929 Exonuclease DO83_RS00130 PF07733 Bacterial DNA polymerase III alpha NTPase domain DO83_RS00130 PF14579 Helix-hairpin-helix motif DO83_RS00130 PF11490 DNA polymerase III polC-type N-terminus II DO83_RS00135 PF04551 GcpE protein DO83_RS00140 PF17820 PDZ domain DO83_RS00140 PF02163 Peptidase family M50 DO83_RS00145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DO83_RS00145 PF13288 DXP reductoisomerase C-terminal domain DO83_RS00145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DO83_RS00155 PF01255 Putative undecaprenyl diphosphate synthase DO83_RS00160 PF01765 Ribosome recycling factor DO83_RS00165 PF00696 Amino acid kinase family DO83_RS00180 PF01869 BadF/BadG/BcrA/BcrD ATPase family DO83_RS00190 PF03109 ABC1 family DO83_RS00200 PF02580 D-Tyr-tRNA(Tyr) deacylase DO83_RS00205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DO83_RS00205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DO83_RS00210 PF10369 Small subunit of acetolactate synthase DO83_RS00215 PF03816 Cell envelope-related transcriptional attenuator domain DO83_RS00220 PF00535 Glycosyl transferase family 2 DO83_RS00225 PF00521 DNA gyrase/topoisomerase IV, subunit A DO83_RS00225 PF03989 DNA gyrase C-terminal domain, beta-propeller DO83_RS00230 PF00204 DNA gyrase B DO83_RS00230 PF01751 Toprim domain DO83_RS00230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS00230 PF00986 DNA gyrase B subunit, carboxyl terminus DO83_RS00250 PF08769 Sporulation initiation factor Spo0A C terminal DO83_RS00250 PF00072 Response regulator receiver domain DO83_RS00255 PF00072 Response regulator receiver domain DO83_RS00255 PF08769 Sporulation initiation factor Spo0A C terminal DO83_RS00260 PF08769 Sporulation initiation factor Spo0A C terminal DO83_RS00260 PF00072 Response regulator receiver domain DO83_RS00270 PF13476 AAA domain DO83_RS00275 PF00149 Calcineurin-like phosphoesterase DO83_RS00275 PF12320 Type 5 capsule protein repressor C-terminal domain DO83_RS00280 PF05580 SpoIVB peptidase S55 DO83_RS00280 PF17820 PDZ domain DO83_RS00285 PF02463 RecF/RecN/SMC N terminal domain DO83_RS00290 PF01316 Arginine repressor, DNA binding domain DO83_RS00290 PF02863 Arginine repressor, C-terminal domain DO83_RS00295 PF01513 ATP-NAD kinase DO83_RS00300 PF01728 FtsJ-like methyltransferase DO83_RS00300 PF01479 S4 domain DO83_RS00305 PF02780 Transketolase, C-terminal domain DO83_RS00305 PF02779 Transketolase, pyrimidine binding domain DO83_RS00305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DO83_RS00310 PF00348 Polyprenyl synthetase DO83_RS00315 PF02609 Exonuclease VII small subunit DO83_RS00320 PF02601 Exonuclease VII, large subunit DO83_RS00320 PF13742 OB-fold nucleic acid binding domain DO83_RS00325 PF01029 NusB family DO83_RS00330 PF03780 Asp23 family, cell envelope-related function DO83_RS00340 PF00474 Sodium:solute symporter family DO83_RS00420 PF00905 Penicillin binding protein transpeptidase domain DO83_RS00420 PF05569 BlaR1 peptidase M56 DO83_RS00425 PF05569 BlaR1 peptidase M56 DO83_RS00425 PF00905 Penicillin binding protein transpeptidase domain DO83_RS00430 PF13732 Domain of unknown function (DUF4162) DO83_RS00430 PF00005 ABC transporter DO83_RS00445 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS00445 PF00989 PAS fold DO83_RS00445 PF11808 Phosphate regulon sensor protein PhoR DO83_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS00450 PF00486 Transcriptional regulatory protein, C terminal DO83_RS00450 PF00072 Response regulator receiver domain DO83_RS00475 PF01554 MatE DO83_RS00480 PF01066 CDP-alcohol phosphatidyltransferase DO83_RS00490 PF16736 Single Cache-like DO83_RS00490 PF00989 PAS fold DO83_RS00490 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS00495 PF00072 Response regulator receiver domain DO83_RS00495 PF00486 Transcriptional regulatory protein, C terminal DO83_RS00500 PF13091 PLD-like domain DO83_RS00510 PF00285 Citrate synthase, C-terminal domain DO83_RS00515 PF13091 PLD-like domain DO83_RS00520 PF04607 Region found in RelA / SpoT proteins DO83_RS00525 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DO83_RS00540 PF06970 Replication initiator protein A (RepA) N-terminus DO83_RS00540 PF18008 Replication initiator protein A C-terminal domain DO83_RS00545 PF02195 ParB-like nuclease domain DO83_RS00545 PF17762 HTH domain found in ParB protein DO83_RS00555 PF02195 ParB-like nuclease domain DO83_RS00555 PF17762 HTH domain found in ParB protein DO83_RS00570 PF00248 Aldo/keto reductase family DO83_RS00585 PF13411 MerR HTH family regulatory protein DO83_RS00620 PF01053 Cys/Met metabolism PLP-dependent enzyme DO83_RS00625 PF01709 Transcriptional regulator DO83_RS00630 PF00571 CBS domain DO83_RS00630 PF03471 Transporter associated domain DO83_RS00635 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DO83_RS00640 PF00842 Alanine racemase, C-terminal domain DO83_RS00640 PF01168 Alanine racemase, N-terminal domain DO83_RS00645 PF03853 YjeF-related protein N-terminus DO83_RS00645 PF01256 Carbohydrate kinase DO83_RS00650 PF01648 4'-phosphopantetheinyl transferase superfamily DO83_RS00655 PF06971 Putative DNA-binding protein N-terminus DO83_RS00655 PF02629 CoA binding domain DO83_RS00660 PF00005 ABC transporter DO83_RS00660 PF16326 ABC transporter C-terminal domain DO83_RS00660 PF12848 ABC transporter DO83_RS00665 PF00535 Glycosyl transferase family 2 DO83_RS00670 PF00082 Subtilase family DO83_RS00670 PF02225 PA domain DO83_RS00670 PF00746 LPXTG cell wall anchor motif DO83_RS00670 PF06280 Fn3-like domain DO83_RS00675 PF06969 HemN C-terminal domain DO83_RS00675 PF04055 Radical SAM superfamily DO83_RS00680 PF00679 Elongation factor G C-terminus DO83_RS00680 PF00009 Elongation factor Tu GTP binding domain DO83_RS00680 PF03144 Elongation factor Tu domain 2 DO83_RS00680 PF06421 GTP-binding protein LepA C-terminus DO83_RS00690 PF03418 Germination protease DO83_RS00695 PF01649 Ribosomal protein S20 DO83_RS00700 PF06144 DNA polymerase III, delta subunit DO83_RS00705 PF00753 Metallo-beta-lactamase superfamily DO83_RS00705 PF13567 Domain of unknown function (DUF4131) DO83_RS00705 PF03772 Competence protein DO83_RS00715 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS00715 PF00672 HAMP domain DO83_RS00715 PF13426 PAS domain DO83_RS00720 PF00072 Response regulator receiver domain DO83_RS00720 PF00486 Transcriptional regulatory protein, C terminal DO83_RS00735 PF00202 Aminotransferase class-III DO83_RS00740 PF00696 Amino acid kinase family DO83_RS00745 PF01960 ArgJ family DO83_RS00750 PF02774 Semialdehyde dehydrogenase, dimerisation domain DO83_RS00750 PF01118 Semialdehyde dehydrogenase, NAD binding domain DO83_RS00755 PF00764 Arginosuccinate synthase DO83_RS00780 PF14698 Argininosuccinate lyase C-terminal DO83_RS00780 PF00206 Lyase DO83_RS00800 PF01174 SNO glutamine amidotransferase family DO83_RS00805 PF01680 SOR/SNZ family DO83_RS00810 PF00392 Bacterial regulatory proteins, gntR family DO83_RS00810 PF00155 Aminotransferase class I and II DO83_RS00840 PF00226 DnaJ domain DO83_RS00840 PF01556 DnaJ C terminal domain DO83_RS00840 PF00684 DnaJ central domain DO83_RS00845 PF00012 Hsp70 protein DO83_RS00850 PF01025 GrpE DO83_RS00855 PF01628 HrcA protein C terminal domain DO83_RS00870 PF08220 DeoR-like helix-turn-helix domain DO83_RS00870 PF00455 DeoR C terminal sensor domain DO83_RS00875 PF00923 Transaldolase/Fructose-6-phosphate aldolase DO83_RS00880 PF13187 4Fe-4S dicluster domain DO83_RS00880 PF04055 Radical SAM superfamily DO83_RS00885 PF01228 Glycine radical DO83_RS00885 PF02901 Pyruvate formate lyase-like DO83_RS00895 PF01022 Bacterial regulatory protein, arsR family DO83_RS00925 PF00579 tRNA synthetases class I (W and Y) DO83_RS00925 PF01479 S4 domain DO83_RS00930 PF05167 Uncharacterised ACR (DUF711) DO83_RS00940 PF00753 Metallo-beta-lactamase superfamily DO83_RS00945 PF01121 Dephospho-CoA kinase DO83_RS00950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DO83_RS00950 PF01367 5'-3' exonuclease, C-terminal SAM fold DO83_RS00950 PF00476 DNA polymerase family A DO83_RS00955 PF00291 Pyridoxal-phosphate dependent enzyme DO83_RS00960 PF02082 Transcriptional regulator DO83_RS00970 PF00293 NUDIX domain DO83_RS00985 PF01594 AI-2E family transporter DO83_RS01000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DO83_RS01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS01010 PF01554 MatE DO83_RS01025 PF00465 Iron-containing alcohol dehydrogenase DO83_RS01030 PF06508 Queuosine biosynthesis protein QueC DO83_RS01035 PF01227 GTP cyclohydrolase I DO83_RS01040 PF04055 Radical SAM superfamily DO83_RS01045 PF01242 6-pyruvoyl tetrahydropterin synthase DO83_RS01050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS01050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS01055 PF01795 MraW methylase family DO83_RS01060 PF04851 Type III restriction enzyme, res subunit DO83_RS01060 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DO83_RS01060 PF00271 Helicase conserved C-terminal domain DO83_RS01060 PF08463 EcoEI R protein C-terminal DO83_RS01065 PF01420 Type I restriction modification DNA specificity domain DO83_RS01070 PF02899 Phage integrase, N-terminal SAM-like domain DO83_RS01070 PF00589 Phage integrase family DO83_RS01075 PF12728 Helix-turn-helix domain DO83_RS01075 PF02661 Fic/DOC family DO83_RS01085 PF02384 N-6 DNA Methylase DO83_RS01085 PF12161 HsdM N-terminal domain DO83_RS01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS01090 PF03466 LysR substrate binding domain DO83_RS01100 PF00005 ABC transporter DO83_RS01105 PF08402 TOBE domain DO83_RS01105 PF00005 ABC transporter DO83_RS01120 PF07486 Cell Wall Hydrolase DO83_RS01120 PF01471 Putative peptidoglycan binding domain DO83_RS01135 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DO83_RS01140 PF01380 SIS domain DO83_RS01140 PF01418 Helix-turn-helix domain, rpiR family DO83_RS01145 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DO83_RS01155 PF02824 TGS domain DO83_RS01155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DO83_RS01155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DO83_RS01155 PF03129 Anticodon binding domain DO83_RS01160 PF01784 NIF3 (NGG1p interacting factor 3) DO83_RS01165 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DO83_RS01170 PF00140 Sigma-70 factor, region 1.2 DO83_RS01170 PF04542 Sigma-70 region 2 DO83_RS01170 PF04539 Sigma-70 region 3 DO83_RS01170 PF03979 Sigma-70 factor, region 1.1 DO83_RS01170 PF04545 Sigma-70, region 4 DO83_RS01175 PF10410 DnaB-helicase binding domain of primase DO83_RS01175 PF08275 DNA primase catalytic core, N-terminal domain DO83_RS01175 PF01807 CHC2 zinc finger DO83_RS01180 PF01966 HD domain DO83_RS01180 PF13286 Phosphohydrolase-associated domain DO83_RS01185 PF03979 Sigma-70 factor, region 1.1 DO83_RS01185 PF00140 Sigma-70 factor, region 1.2 DO83_RS01185 PF04539 Sigma-70 region 3 DO83_RS01185 PF04545 Sigma-70, region 4 DO83_RS01185 PF04542 Sigma-70 region 2 DO83_RS01190 PF02673 Bacitracin resistance protein BacA DO83_RS01195 PF01192 RNA polymerase Rpb6 DO83_RS01200 PF00625 Guanylate kinase DO83_RS01205 PF08340 Domain of unknown function (DUF1732) DO83_RS01205 PF03755 YicC-like family, N-terminal region DO83_RS01210 PF03838 Recombination protein U DO83_RS01215 PF01479 S4 domain DO83_RS01215 PF00849 RNA pseudouridylate synthase DO83_RS01220 PF00106 short chain dehydrogenase DO83_RS01225 PF13419 Haloacid dehalogenase-like hydrolase DO83_RS01230 PF01479 S4 domain DO83_RS01230 PF00849 RNA pseudouridylate synthase DO83_RS01235 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DO83_RS01235 PF01189 16S rRNA methyltransferase RsmB/F DO83_RS01235 PF17126 RsmF rRNA methyltransferase first C-terminal domain DO83_RS01240 PF04607 Region found in RelA / SpoT proteins DO83_RS01245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DO83_RS01245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DO83_RS01250 PF09547 Stage IV sporulation protein A (spore_IV_A) DO83_RS01255 PF08501 Shikimate dehydrogenase substrate binding domain DO83_RS01255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DO83_RS01260 PF08245 Mur ligase middle domain DO83_RS01260 PF02875 Mur ligase family, glutamate ligase domain DO83_RS01260 PF01225 Mur ligase family, catalytic domain DO83_RS01265 PF01678 Diaminopimelate epimerase DO83_RS01270 PF12897 Alanine-glyoxylate amino-transferase DO83_RS01275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DO83_RS01275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DO83_RS01280 PF02660 Glycerol-3-phosphate acyltransferase DO83_RS01285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DO83_RS01285 PF01926 50S ribosome-binding GTPase DO83_RS01290 PF02578 Multi-copper polyphenol oxidoreductase laccase DO83_RS01295 PF02021 Uncharacterised protein family UPF0102 DO83_RS01300 PF01351 Ribonuclease HII DO83_RS01305 PF10502 Signal peptidase, peptidase S26 DO83_RS01310 PF01926 50S ribosome-binding GTPase DO83_RS01315 PF10502 Signal peptidase, peptidase S26 DO83_RS01320 PF01245 Ribosomal protein L19 DO83_RS01330 PF01746 tRNA (Guanine-1)-methyltransferase DO83_RS01335 PF05239 PRC-barrel domain DO83_RS01335 PF01782 RimM N-terminal domain DO83_RS01340 PF01546 Peptidase family M20/M25/M40 DO83_RS01340 PF07687 Peptidase dimerisation domain DO83_RS01355 PF03169 OPT oligopeptide transporter protein DO83_RS01390 PF00534 Glycosyl transferases group 1 DO83_RS01390 PF08323 Starch synthase catalytic domain DO83_RS01395 PF01520 N-acetylmuramoyl-L-alanine amidase DO83_RS01400 PF05105 Bacteriophage holin family DO83_RS01415 PF02899 Phage integrase, N-terminal SAM-like domain DO83_RS01415 PF00589 Phage integrase family DO83_RS01520 PF10668 Phage terminase small subunit DO83_RS01520 PF03592 Terminase small subunit DO83_RS01695 PF01209 ubiE/COQ5 methyltransferase family DO83_RS01710 PF01554 MatE DO83_RS01725 PF01668 SmpB protein DO83_RS01730 PF00575 S1 RNA binding domain DO83_RS01730 PF00773 RNB domain DO83_RS01730 PF08206 Ribonuclease B OB domain DO83_RS01730 PF17876 Cold shock domain DO83_RS01740 PF00113 Enolase, C-terminal TIM barrel domain DO83_RS01740 PF03952 Enolase, N-terminal domain DO83_RS01760 PF09820 Predicted AAA-ATPase DO83_RS01760 PF08011 PD-(D/E)XK nuclease superfamily DO83_RS01790 PF01554 MatE DO83_RS01810 PF01676 Metalloenzyme superfamily DO83_RS01810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DO83_RS01820 PF01676 Metalloenzyme superfamily DO83_RS01825 PF00121 Triosephosphate isomerase DO83_RS01830 PF00162 Phosphoglycerate kinase DO83_RS01835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DO83_RS01835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DO83_RS01840 PF02690 Na+/Pi-cotransporter DO83_RS01855 PF00877 NlpC/P60 family DO83_RS01890 PF02001 Protein of unknown function DUF134 DO83_RS01915 PF02664 S-Ribosylhomocysteinase (LuxS) DO83_RS01925 PF03600 Citrate transporter DO83_RS01940 PF00886 Ribosomal protein S16 DO83_RS01945 PF02978 Signal peptide binding domain DO83_RS01945 PF02881 SRP54-type protein, helical bundle domain DO83_RS01945 PF00448 SRP54-type protein, GTPase domain DO83_RS01950 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DO83_RS01955 PF12848 ABC transporter DO83_RS01955 PF00005 ABC transporter DO83_RS01960 PF01171 PP-loop family DO83_RS01970 PF00989 PAS fold DO83_RS01970 PF16736 Single Cache-like DO83_RS01970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS01970 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS01975 PF00486 Transcriptional regulatory protein, C terminal DO83_RS01975 PF00072 Response regulator receiver domain DO83_RS01990 PF00154 recA bacterial DNA recombination protein DO83_RS01995 PF02464 Competence-damaged protein DO83_RS01995 PF00994 Probable molybdopterin binding domain DO83_RS01995 PF18146 Damage-inducible protein CinA KH domain DO83_RS02000 PF01066 CDP-alcohol phosphatidyltransferase DO83_RS02005 PF18693 TRAM domain DO83_RS02005 PF04055 Radical SAM superfamily DO83_RS02005 PF00919 Uncharacterized protein family UPF0004 DO83_RS02010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DO83_RS02010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DO83_RS02015 PF01268 Formate--tetrahydrofolate ligase DO83_RS02020 PF01580 FtsK/SpoIIIE family DO83_RS02020 PF09397 Ftsk gamma domain DO83_RS02020 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DO83_RS02020 PF17854 FtsK alpha domain DO83_RS02030 PF00574 Clp protease DO83_RS02035 PF00364 Biotin-requiring enzyme DO83_RS02035 PF00289 Biotin carboxylase, N-terminal domain DO83_RS02035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DO83_RS02035 PF02785 Biotin carboxylase C-terminal domain DO83_RS02035 PF00682 HMGL-like DO83_RS02035 PF02436 Conserved carboxylase domain DO83_RS02045 PF02224 Cytidylate kinase DO83_RS02055 PF01385 Probable transposase DO83_RS02055 PF12323 Helix-turn-helix domain DO83_RS02055 PF07282 Putative transposase DNA-binding domain DO83_RS02065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS02065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS02070 PF00248 Aldo/keto reductase family DO83_RS02075 PF02547 Queuosine biosynthesis protein DO83_RS02080 PF01554 MatE DO83_RS02085 PF00877 NlpC/P60 family DO83_RS02125 PF00209 Sodium:neurotransmitter symporter family DO83_RS02135 PF13443 Cro/C1-type HTH DNA-binding domain DO83_RS02145 PF03483 B3/4 domain DO83_RS02145 PF01588 Putative tRNA binding domain DO83_RS02145 PF03484 tRNA synthetase B5 domain DO83_RS02145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DO83_RS02145 PF03147 Ferredoxin-fold anticodon binding domain DO83_RS02150 PF01409 tRNA synthetases class II core domain (F) DO83_RS02150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DO83_RS02165 PF00367 phosphotransferase system, EIIB DO83_RS02165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS02165 PF02378 Phosphotransferase system, EIIC DO83_RS02170 PF01238 Phosphomannose isomerase type I DO83_RS02180 PF03613 PTS system mannose/fructose/sorbose family IID component DO83_RS02185 PF03609 PTS system sorbose-specific iic component DO83_RS02190 PF03830 PTS system sorbose subfamily IIB component DO83_RS02190 PF03610 PTS system fructose IIA component DO83_RS02195 PF00874 PRD domain DO83_RS02195 PF03123 CAT RNA binding domain DO83_RS02200 PF03631 Virulence factor BrkB DO83_RS02205 PF00365 Phosphofructokinase DO83_RS02210 PF00557 Metallopeptidase family M24 DO83_RS02210 PF01321 Creatinase/Prolidase N-terminal domain DO83_RS02215 PF00497 Bacterial extracellular solute-binding proteins, family 3 DO83_RS02220 PF04539 Sigma-70 region 3 DO83_RS02220 PF04542 Sigma-70 region 2 DO83_RS02220 PF04545 Sigma-70, region 4 DO83_RS02230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS02230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS02235 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DO83_RS02250 PF01430 Hsp33 protein DO83_RS02255 PF13649 Methyltransferase domain DO83_RS02260 PF13091 PLD-like domain DO83_RS02265 PF02581 Thiamine monophosphate synthase DO83_RS02275 PF00580 UvrD/REP helicase N-terminal domain DO83_RS02275 PF13361 UvrD-like helicase C-terminal domain DO83_RS02275 PF12705 PD-(D/E)XK nuclease superfamily DO83_RS02280 PF12705 PD-(D/E)XK nuclease superfamily DO83_RS02295 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS02300 PF00005 ABC transporter DO83_RS02300 PF09383 NIL domain DO83_RS02305 PF03180 NLPA lipoprotein DO83_RS02410 PF13361 UvrD-like helicase C-terminal domain DO83_RS02410 PF00580 UvrD/REP helicase N-terminal domain DO83_RS02420 PF01371 Trp repressor protein DO83_RS02425 PF01235 Sodium:alanine symporter family DO83_RS02430 PF00209 Sodium:neurotransmitter symporter family DO83_RS02435 PF02843 Phosphoribosylglycinamide synthetase, C domain DO83_RS02435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DO83_RS02435 PF02844 Phosphoribosylglycinamide synthetase, N domain DO83_RS02440 PF00551 Formyl transferase DO83_RS02445 PF02769 AIR synthase related protein, C-terminal domain DO83_RS02445 PF00586 AIR synthase related protein, N-terminal domain DO83_RS02455 PF00731 AIR carboxylase DO83_RS02475 PF00156 Phosphoribosyl transferase domain DO83_RS02485 PF01180 Dihydroorotate dehydrogenase DO83_RS02490 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DO83_RS02495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DO83_RS02505 PF00232 Glycosyl hydrolase family 1 DO83_RS02515 PF05690 Thiazole biosynthesis protein ThiG DO83_RS02520 PF05690 Thiazole biosynthesis protein ThiG DO83_RS02520 PF02597 ThiS family DO83_RS02530 PF05105 Bacteriophage holin family DO83_RS02575 PF00877 NlpC/P60 family DO83_RS02665 PF00589 Phage integrase family DO83_RS02675 PF01381 Helix-turn-helix DO83_RS02675 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DO83_RS02710 PF13614 AAA domain DO83_RS02810 PF04172 LrgB-like family DO83_RS02815 PF03788 LrgA family DO83_RS02840 PF04542 Sigma-70 region 2 DO83_RS02840 PF08281 Sigma-70, region 4 DO83_RS02845 PF08032 RNA 2'-O ribose methyltransferase substrate binding DO83_RS02845 PF00588 SpoU rRNA Methylase family DO83_RS02850 PF00636 Ribonuclease III domain DO83_RS02855 PF09190 DALR domain DO83_RS02855 PF01406 tRNA synthetases class I (C) catalytic domain DO83_RS02860 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS02865 PF02632 BioY family DO83_RS02875 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS02875 PF12464 Maltose acetyltransferase DO83_RS02910 PF08502 LeuA allosteric (dimerisation) domain DO83_RS02910 PF00682 HMGL-like DO83_RS02915 PF02310 B12 binding domain DO83_RS02915 PF02607 B12 binding domain DO83_RS02915 PF02965 Vitamin B12 dependent methionine synthase, activation domain DO83_RS02915 PF00809 Pterin binding enzyme DO83_RS02915 PF02574 Homocysteine S-methyltransferase DO83_RS02925 PF02219 Methylenetetrahydrofolate reductase DO83_RS02930 PF09186 Domain of unknown function (DUF1949) DO83_RS02930 PF01205 Uncharacterized protein family UPF0029 DO83_RS02940 PF00912 Transglycosylase DO83_RS02940 PF00905 Penicillin binding protein transpeptidase domain DO83_RS02945 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DO83_RS02950 PF07451 Stage V sporulation protein AD (SpoVAD) DO83_RS02955 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DO83_RS02960 PF13782 Stage V sporulation protein AB DO83_RS02965 PF12164 Stage V sporulation protein AA DO83_RS02980 PF01926 50S ribosome-binding GTPase DO83_RS02985 PF01522 Polysaccharide deacetylase DO83_RS02990 PF18318 Glutamine synthetase C-terminal domain DO83_RS02990 PF00120 Glutamine synthetase, catalytic domain DO83_RS02990 PF12437 Glutamine synthetase type III N terminal DO83_RS03005 PF00005 ABC transporter DO83_RS03020 PF01522 Polysaccharide deacetylase DO83_RS03025 PF01979 Amidohydrolase family DO83_RS03030 PF00367 phosphotransferase system, EIIB DO83_RS03030 PF02378 Phosphotransferase system, EIIC DO83_RS03035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS03035 PF00367 phosphotransferase system, EIIB DO83_RS03035 PF02378 Phosphotransferase system, EIIC DO83_RS03040 PF00874 PRD domain DO83_RS03040 PF03123 CAT RNA binding domain DO83_RS03045 PF08239 Bacterial SH3 domain DO83_RS03045 PF01520 N-acetylmuramoyl-L-alanine amidase DO83_RS03070 PF16363 GDP-mannose 4,6 dehydratase DO83_RS03075 PF00483 Nucleotidyl transferase DO83_RS03080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DO83_RS03085 PF04321 RmlD substrate binding domain DO83_RS03090 PF08241 Methyltransferase domain DO83_RS03100 PF01545 Cation efflux family DO83_RS03100 PF16916 Dimerisation domain of Zinc Transporter DO83_RS03105 PF00330 Aconitase family (aconitate hydratase) DO83_RS03110 PF00694 Aconitase C-terminal domain DO83_RS03115 PF00330 Aconitase family (aconitate hydratase) DO83_RS03120 PF00694 Aconitase C-terminal domain DO83_RS03135 PF02386 Cation transport protein DO83_RS03140 PF02254 TrkA-N domain DO83_RS03140 PF02080 TrkA-C domain DO83_RS03145 PF01380 SIS domain DO83_RS03150 PF00834 Ribulose-phosphate 3 epimerase family DO83_RS03165 PF03611 PTS system sugar-specific permease component DO83_RS03175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS03175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS03175 PF05043 Mga helix-turn-helix domain DO83_RS03175 PF08279 HTH domain DO83_RS03175 PF00874 PRD domain DO83_RS03180 PF04607 Region found in RelA / SpoT proteins DO83_RS03185 PF01925 Sulfite exporter TauE/SafE DO83_RS03195 PF05067 Manganese containing catalase DO83_RS03220 PF00474 Sodium:solute symporter family DO83_RS03225 PF04024 PspC domain DO83_RS03245 PF02638 Glycosyl hydrolase-like 10 DO83_RS03250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DO83_RS03255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DO83_RS03260 PF01842 ACT domain DO83_RS03260 PF02153 Prephenate dehydrogenase DO83_RS03265 PF02824 TGS domain DO83_RS03265 PF13291 ACT domain DO83_RS03265 PF04607 Region found in RelA / SpoT proteins DO83_RS03275 PF02127 Aminopeptidase I zinc metalloprotease (M18) DO83_RS03290 PF08220 DeoR-like helix-turn-helix domain DO83_RS03290 PF00455 DeoR C terminal sensor domain DO83_RS03295 PF02378 Phosphotransferase system, EIIC DO83_RS03295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS03300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS03300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS03305 PF01791 DeoC/LacD family aldolase DO83_RS03320 PF00465 Iron-containing alcohol dehydrogenase DO83_RS03330 PF00205 Thiamine pyrophosphate enzyme, central domain DO83_RS03330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DO83_RS03330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DO83_RS03335 PF00294 pfkB family carbohydrate kinase DO83_RS03340 PF00356 Bacterial regulatory proteins, lacI family DO83_RS03345 PF08220 DeoR-like helix-turn-helix domain DO83_RS03345 PF00455 DeoR C terminal sensor domain DO83_RS03355 PF01261 Xylose isomerase-like TIM barrel DO83_RS03360 PF01261 Xylose isomerase-like TIM barrel DO83_RS03370 PF01261 Xylose isomerase-like TIM barrel DO83_RS03375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS03375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS03380 PF00356 Bacterial regulatory proteins, lacI family DO83_RS03385 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS03400 PF01261 Xylose isomerase-like TIM barrel DO83_RS03410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS03410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS03415 PF00356 Bacterial regulatory proteins, lacI family DO83_RS03420 PF01047 MarR family DO83_RS03425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DO83_RS03425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DO83_RS03425 PF02770 Acyl-CoA dehydrogenase, middle domain DO83_RS03430 PF00378 Enoyl-CoA hydratase/isomerase DO83_RS03435 PF01144 Coenzyme A transferase DO83_RS03445 PF13237 4Fe-4S dicluster domain DO83_RS03445 PF00766 Electron transfer flavoprotein FAD-binding domain DO83_RS03445 PF01012 Electron transfer flavoprotein domain DO83_RS03450 PF01012 Electron transfer flavoprotein domain DO83_RS03455 PF00766 Electron transfer flavoprotein FAD-binding domain DO83_RS03455 PF01012 Electron transfer flavoprotein domain DO83_RS03460 PF01012 Electron transfer flavoprotein domain DO83_RS03465 PF02770 Acyl-CoA dehydrogenase, middle domain DO83_RS03465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DO83_RS03465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DO83_RS03470 PF00294 pfkB family carbohydrate kinase DO83_RS03475 PF00251 Glycosyl hydrolases family 32 N-terminal domain DO83_RS03475 PF08244 Glycosyl hydrolases family 32 C terminal DO83_RS03480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS03480 PF00367 phosphotransferase system, EIIB DO83_RS03480 PF02378 Phosphotransferase system, EIIC DO83_RS03485 PF13407 Periplasmic binding protein domain DO83_RS03485 PF00356 Bacterial regulatory proteins, lacI family DO83_RS03490 PF13514 AAA domain DO83_RS03495 PF12320 Type 5 capsule protein repressor C-terminal domain DO83_RS03495 PF00149 Calcineurin-like phosphoesterase DO83_RS03520 PF00005 ABC transporter DO83_RS03520 PF00664 ABC transporter transmembrane region DO83_RS03545 PF00535 Glycosyl transferase family 2 DO83_RS03570 PF00534 Glycosyl transferases group 1 DO83_RS03610 PF11380 Stealth protein CR2, conserved region 2 DO83_RS03610 PF17103 Stealth protein CR4, conserved region 4 DO83_RS03610 PF17101 Stealth protein CR1, conserved region 1 DO83_RS03660 PF13286 Phosphohydrolase-associated domain DO83_RS03660 PF01966 HD domain DO83_RS03695 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS03705 PF00535 Glycosyl transferase family 2 DO83_RS03705 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DO83_RS03720 PF00534 Glycosyl transferases group 1 DO83_RS03720 PF13439 Glycosyltransferase Family 4 DO83_RS03725 PF02397 Bacterial sugar transferase DO83_RS03730 PF00155 Aminotransferase class I and II DO83_RS03755 PF17191 RecG wedge domain DO83_RS03755 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DO83_RS03755 PF00270 DEAD/DEAH box helicase DO83_RS03760 PF01235 Sodium:alanine symporter family DO83_RS03765 PF00950 ABC 3 transport family DO83_RS03770 PF00005 ABC transporter DO83_RS03775 PF01297 Zinc-uptake complex component A periplasmic DO83_RS03795 PF02146 Sir2 family DO83_RS03800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DO83_RS03800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DO83_RS03805 PF00885 6,7-dimethyl-8-ribityllumazine synthase DO83_RS03810 PF00925 GTP cyclohydrolase II DO83_RS03810 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DO83_RS03815 PF00677 Lumazine binding domain DO83_RS03820 PF01872 RibD C-terminal domain DO83_RS03820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DO83_RS03835 PF00293 NUDIX domain DO83_RS03845 PF00285 Citrate synthase, C-terminal domain DO83_RS03850 PF01047 MarR family DO83_RS03855 PF02811 PHP domain DO83_RS03855 PF01336 OB-fold nucleic acid binding domain DO83_RS03855 PF14579 Helix-hairpin-helix motif DO83_RS03855 PF07733 Bacterial DNA polymerase III alpha NTPase domain DO83_RS03855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DO83_RS03865 PF13932 GidA associated domain DO83_RS03865 PF01134 Glucose inhibited division protein A DO83_RS03885 PF04463 Protein of unknown function (DUF523) DO83_RS03895 PF02938 GAD domain DO83_RS03895 PF00152 tRNA synthetases class II (D, K and N) DO83_RS03895 PF01336 OB-fold nucleic acid binding domain DO83_RS03900 PF01207 Dihydrouridine synthase (Dus) DO83_RS03905 PF01259 SAICAR synthetase DO83_RS03915 PF00128 Alpha amylase, catalytic domain DO83_RS03915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DO83_RS03925 PF01235 Sodium:alanine symporter family DO83_RS03935 PF00664 ABC transporter transmembrane region DO83_RS03935 PF00005 ABC transporter DO83_RS03940 PF00005 ABC transporter DO83_RS03940 PF00664 ABC transporter transmembrane region DO83_RS03945 PF01047 MarR family DO83_RS03950 PF02810 SEC-C motif DO83_RS03950 PF07516 SecA Wing and Scaffold domain DO83_RS03950 PF07517 SecA DEAD-like domain DO83_RS03950 PF01043 SecA preprotein cross-linking domain DO83_RS03960 PF05496 Holliday junction DNA helicase RuvB P-loop domain DO83_RS03960 PF12002 MgsA AAA+ ATPase C terminal DO83_RS03960 PF16193 AAA C-terminal domain DO83_RS03975 PF12116 Stage III sporulation protein D DO83_RS03980 PF02492 CobW/HypB/UreG, nucleotide-binding domain DO83_RS03980 PF07683 Cobalamin synthesis protein cobW C-terminal domain DO83_RS03985 PF12323 Helix-turn-helix domain DO83_RS03985 PF07282 Putative transposase DNA-binding domain DO83_RS03985 PF01385 Probable transposase DO83_RS03995 PF02492 CobW/HypB/UreG, nucleotide-binding domain DO83_RS03995 PF07683 Cobalamin synthesis protein cobW C-terminal domain DO83_RS04000 PF00465 Iron-containing alcohol dehydrogenase DO83_RS04015 PF00313 'Cold-shock' DNA-binding domain DO83_RS04035 PF04542 Sigma-70 region 2 DO83_RS04035 PF08281 Sigma-70, region 4 DO83_RS04040 PF02637 GatB domain DO83_RS04040 PF02934 GatB/GatE catalytic domain DO83_RS04045 PF01425 Amidase DO83_RS04050 PF02686 Glu-tRNAGln amidotransferase C subunit DO83_RS04060 PF08244 Glycosyl hydrolases family 32 C terminal DO83_RS04060 PF00251 Glycosyl hydrolases family 32 N-terminal domain DO83_RS04065 PF02378 Phosphotransferase system, EIIC DO83_RS04065 PF00367 phosphotransferase system, EIIB DO83_RS04070 PF08244 Glycosyl hydrolases family 32 C terminal DO83_RS04070 PF00251 Glycosyl hydrolases family 32 N-terminal domain DO83_RS04075 PF00356 Bacterial regulatory proteins, lacI family DO83_RS04080 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS04095 PF16745 RsgA N-terminal domain DO83_RS04095 PF03193 RsgA GTPase DO83_RS04100 PF03793 PASTA domain DO83_RS04100 PF00069 Protein kinase domain DO83_RS04110 PF04055 Radical SAM superfamily DO83_RS04115 PF01189 16S rRNA methyltransferase RsmB/F DO83_RS04115 PF01029 NusB family DO83_RS04120 PF00551 Formyl transferase DO83_RS04120 PF02911 Formyl transferase, C-terminal domain DO83_RS04125 PF01327 Polypeptide deformylase DO83_RS04130 PF18074 Primosomal protein N C-terminal domain DO83_RS04130 PF04851 Type III restriction enzyme, res subunit DO83_RS04130 PF17764 3′ DNA-binding domain (3′BD) DO83_RS04130 PF00271 Helicase conserved C-terminal domain DO83_RS04130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DO83_RS04135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DO83_RS04135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DO83_RS04135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DO83_RS04135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DO83_RS04145 PF02779 Transketolase, pyrimidine binding domain DO83_RS04145 PF02780 Transketolase, C-terminal domain DO83_RS04150 PF00456 Transketolase, thiamine diphosphate binding domain DO83_RS04155 PF00923 Transaldolase/Fructose-6-phosphate aldolase DO83_RS04160 PF00356 Bacterial regulatory proteins, lacI family DO83_RS04170 PF00180 Isocitrate/isopropylmalate dehydrogenase DO83_RS04175 PF00392 Bacterial regulatory proteins, gntR family DO83_RS04175 PF07702 UTRA domain DO83_RS04180 PF01791 DeoC/LacD family aldolase DO83_RS04185 PF06560 Glucose-6-phosphate isomerase (GPI) DO83_RS04190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DO83_RS04190 PF02256 Iron hydrogenase small subunit DO83_RS04190 PF02906 Iron only hydrogenase large subunit, C-terminal domain DO83_RS04190 PF00037 4Fe-4S binding domain DO83_RS04195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DO83_RS04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS04195 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DO83_RS04200 PF02645 Uncharacterised protein, DegV family COG1307 DO83_RS04210 PF13180 PDZ domain DO83_RS04215 PF02397 Bacterial sugar transferase DO83_RS04220 PF03816 Cell envelope-related transcriptional attenuator domain DO83_RS04225 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DO83_RS04230 PF00535 Glycosyl transferase family 2 DO83_RS04235 PF00535 Glycosyl transferase family 2 DO83_RS04235 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DO83_RS04245 PF01467 Cytidylyltransferase-like DO83_RS04250 PF00005 ABC transporter DO83_RS04255 PF01061 ABC-2 type transporter DO83_RS04265 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DO83_RS04265 PF00535 Glycosyl transferase family 2 DO83_RS04270 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DO83_RS04295 PF00535 Glycosyl transferase family 2 DO83_RS04300 PF00535 Glycosyl transferase family 2 DO83_RS04315 PF16363 GDP-mannose 4,6 dehydratase DO83_RS04325 PF03275 UDP-galactopyranose mutase DO83_RS04355 PF01943 Polysaccharide biosynthesis protein DO83_RS04370 PF00535 Glycosyl transferase family 2 DO83_RS04370 PF01501 Glycosyl transferase family 8 DO83_RS04375 PF00535 Glycosyl transferase family 2 DO83_RS04380 PF00535 Glycosyl transferase family 2 DO83_RS04385 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS04405 PF02397 Bacterial sugar transferase DO83_RS04445 PF04138 GtrA-like protein DO83_RS04450 PF00535 Glycosyl transferase family 2 DO83_RS04460 PF02457 DisA bacterial checkpoint controller nucleotide-binding DO83_RS04475 PF02915 Rubrerythrin DO83_RS04485 PF02913 FAD linked oxidases, C-terminal domain DO83_RS04485 PF01565 FAD binding domain DO83_RS04490 PF01012 Electron transfer flavoprotein domain DO83_RS04490 PF00766 Electron transfer flavoprotein FAD-binding domain DO83_RS04495 PF01012 Electron transfer flavoprotein domain DO83_RS04500 PF07729 FCD domain DO83_RS04500 PF00392 Bacterial regulatory proteins, gntR family DO83_RS04505 PF03006 Haemolysin-III related DO83_RS04510 PF01541 GIY-YIG catalytic domain DO83_RS04520 PF08486 Stage II sporulation protein DO83_RS04530 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DO83_RS04530 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DO83_RS04530 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DO83_RS04535 PF01553 Acyltransferase DO83_RS04560 PF00072 Response regulator receiver domain DO83_RS04560 PF00486 Transcriptional regulatory protein, C terminal DO83_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS04565 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS04565 PF00672 HAMP domain DO83_RS04565 PF13426 PAS domain DO83_RS04570 PF02441 Flavoprotein DO83_RS04570 PF04127 DNA / pantothenate metabolism flavoprotein DO83_RS04575 PF02261 Aspartate decarboxylase DO83_RS04580 PF02569 Pantoate-beta-alanine ligase DO83_RS04585 PF02548 Ketopantoate hydroxymethyltransferase DO83_RS04605 PF02653 Branched-chain amino acid transport system / permease component DO83_RS04615 PF02446 4-alpha-glucanotransferase DO83_RS04620 PF00390 Malic enzyme, N-terminal domain DO83_RS04620 PF03949 Malic enzyme, NAD binding domain DO83_RS04625 PF02780 Transketolase, C-terminal domain DO83_RS04625 PF02779 Transketolase, pyrimidine binding domain DO83_RS04625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DO83_RS04630 PF00456 Transketolase, thiamine diphosphate binding domain DO83_RS04635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS04640 PF03611 PTS system sugar-specific permease component DO83_RS04650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS04650 PF00874 PRD domain DO83_RS04650 PF05043 Mga helix-turn-helix domain DO83_RS04650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS04650 PF08279 HTH domain DO83_RS04675 PF04070 Domain of unknown function (DUF378) DO83_RS04680 PF00766 Electron transfer flavoprotein FAD-binding domain DO83_RS04680 PF01012 Electron transfer flavoprotein domain DO83_RS04685 PF01012 Electron transfer flavoprotein domain DO83_RS04690 PF02770 Acyl-CoA dehydrogenase, middle domain DO83_RS04690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DO83_RS04690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DO83_RS04695 PF01565 FAD binding domain DO83_RS04695 PF02913 FAD linked oxidases, C-terminal domain DO83_RS04700 PF02652 L-lactate permease DO83_RS04710 PF07687 Peptidase dimerisation domain DO83_RS04710 PF01546 Peptidase family M20/M25/M40 DO83_RS04715 PF00664 ABC transporter transmembrane region DO83_RS04715 PF00005 ABC transporter DO83_RS04720 PF00664 ABC transporter transmembrane region DO83_RS04720 PF00005 ABC transporter DO83_RS04725 PF04304 Protein of unknown function (DUF454) DO83_RS04730 PF00005 ABC transporter DO83_RS04735 PF01032 FecCD transport family DO83_RS04740 PF01497 Periplasmic binding protein DO83_RS04790 PF01791 DeoC/LacD family aldolase DO83_RS04805 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS04815 PF03611 PTS system sugar-specific permease component DO83_RS04825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS04830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS04830 PF00874 PRD domain DO83_RS04830 PF05043 Mga helix-turn-helix domain DO83_RS04830 PF08279 HTH domain DO83_RS04845 PF07873 YabP family DO83_RS04850 PF01479 S4 domain DO83_RS04855 PF00216 Bacterial DNA-binding protein DO83_RS04860 PF17783 CvfB-like winged helix domain DO83_RS04860 PF13509 S1 domain DO83_RS04870 PF08239 Bacterial SH3 domain DO83_RS04870 PF01183 Glycosyl hydrolases family 25 DO83_RS04875 PF04203 Sortase domain DO83_RS04885 PF01325 Iron dependent repressor, N-terminal DNA binding domain DO83_RS04885 PF02742 Iron dependent repressor, metal binding and dimerisation domain DO83_RS04890 PF00403 Heavy-metal-associated domain DO83_RS04920 PF00258 Flavodoxin DO83_RS04930 PF00012 Hsp70 protein DO83_RS04935 PF01556 DnaJ C terminal domain DO83_RS04935 PF00226 DnaJ domain DO83_RS04935 PF00684 DnaJ central domain DO83_RS04950 PF03717 Penicillin-binding Protein dimerisation domain DO83_RS04950 PF00905 Penicillin binding protein transpeptidase domain DO83_RS04950 PF05223 NTF2-like N-terminal transpeptidase domain DO83_RS04955 PF00795 Carbon-nitrogen hydrolase DO83_RS04965 PF01594 AI-2E family transporter DO83_RS04970 PF12848 ABC transporter DO83_RS04970 PF16326 ABC transporter C-terminal domain DO83_RS04970 PF00005 ABC transporter DO83_RS04975 PF00085 Thioredoxin DO83_RS04980 PF02390 Putative methyltransferase DO83_RS05005 PF02687 FtsX-like permease family DO83_RS05005 PF00005 ABC transporter DO83_RS05005 PF12704 MacB-like periplasmic core domain DO83_RS05035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DO83_RS05035 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DO83_RS05040 PF02874 ATP synthase alpha/beta family, beta-barrel domain DO83_RS05040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS05045 PF00231 ATP synthase DO83_RS05050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS05050 PF00306 ATP synthase alpha/beta chain, C terminal domain DO83_RS05050 PF02874 ATP synthase alpha/beta family, beta-barrel domain DO83_RS05055 PF00213 ATP synthase delta (OSCP) subunit DO83_RS05060 PF00430 ATP synthase B/B' CF(0) DO83_RS05065 PF00137 ATP synthase subunit C DO83_RS05070 PF00119 ATP synthase A chain DO83_RS05085 PF00202 Aminotransferase class-III DO83_RS05105 PF13732 Domain of unknown function (DUF4162) DO83_RS05105 PF00005 ABC transporter DO83_RS05125 PF13333 Integrase core domain DO83_RS05125 PF13276 HTH-like domain DO83_RS05125 PF00665 Integrase core domain DO83_RS05135 PF13344 Haloacid dehalogenase-like hydrolase DO83_RS05140 PF00083 Sugar (and other) transporter DO83_RS05145 PF00149 Calcineurin-like phosphoesterase DO83_RS05150 PF00356 Bacterial regulatory proteins, lacI family DO83_RS05155 PF09339 IclR helix-turn-helix domain DO83_RS05155 PF01614 Bacterial transcriptional regulator DO83_RS05160 PF03061 Thioesterase superfamily DO83_RS05165 PF06496 Protein of unknown function (DUF1097) DO83_RS05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS05170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DO83_RS05175 PF01180 Dihydroorotate dehydrogenase DO83_RS05180 PF01979 Amidohydrolase family DO83_RS05195 PF01546 Peptidase family M20/M25/M40 DO83_RS05195 PF07687 Peptidase dimerisation domain DO83_RS05200 PF13411 MerR HTH family regulatory protein DO83_RS05200 PF06445 GyrI-like small molecule binding domain DO83_RS05210 PF03061 Thioesterase superfamily DO83_RS05215 PF02515 CoA-transferase family III DO83_RS05220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DO83_RS05220 PF02770 Acyl-CoA dehydrogenase, middle domain DO83_RS05220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DO83_RS05225 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DO83_RS05225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DO83_RS05230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS05230 PF02874 ATP synthase alpha/beta family, beta-barrel domain DO83_RS05235 PF00231 ATP synthase DO83_RS05240 PF02874 ATP synthase alpha/beta family, beta-barrel domain DO83_RS05240 PF00306 ATP synthase alpha/beta chain, C terminal domain DO83_RS05240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS05250 PF00430 ATP synthase B/B' CF(0) DO83_RS05255 PF00137 ATP synthase subunit C DO83_RS05260 PF00119 ATP synthase A chain DO83_RS05265 PF02502 Ribose/Galactose Isomerase DO83_RS05270 PF03481 Putative GTP-binding controlling metal-binding DO83_RS05270 PF01300 Telomere recombination DO83_RS05275 PF01520 N-acetylmuramoyl-L-alanine amidase DO83_RS05285 PF05389 Negative regulator of genetic competence (MecA) DO83_RS05290 PF00465 Iron-containing alcohol dehydrogenase DO83_RS05300 PF02733 Dak1 domain DO83_RS05305 PF00596 Class II Aldolase and Adducin N-terminal domain DO83_RS05315 PF02733 Dak1 domain DO83_RS05320 PF03611 PTS system sugar-specific permease component DO83_RS05340 PF12838 4Fe-4S dicluster domain DO83_RS05345 PF00294 pfkB family carbohydrate kinase DO83_RS05355 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DO83_RS05355 PF13538 UvrD-like helicase C-terminal domain DO83_RS05355 PF14490 Helix-hairpin-helix containing domain DO83_RS05365 PF01170 Putative RNA methylase family UPF0020 DO83_RS05365 PF10672 S-adenosylmethionine-dependent methyltransferase DO83_RS05365 PF02926 THUMP domain DO83_RS05380 PF02595 Glycerate kinase family DO83_RS05385 PF00689 Cation transporting ATPase, C-terminus DO83_RS05385 PF00690 Cation transporter/ATPase, N-terminus DO83_RS05390 PF07282 Putative transposase DNA-binding domain DO83_RS05390 PF01385 Probable transposase DO83_RS05390 PF12323 Helix-turn-helix domain DO83_RS05405 PF04011 LemA family DO83_RS05425 PF03144 Elongation factor Tu domain 2 DO83_RS05425 PF03143 Elongation factor Tu C-terminal domain DO83_RS05425 PF00009 Elongation factor Tu GTP binding domain DO83_RS05445 PF03143 Elongation factor Tu C-terminal domain DO83_RS05445 PF03144 Elongation factor Tu domain 2 DO83_RS05445 PF00009 Elongation factor Tu GTP binding domain DO83_RS05450 PF00679 Elongation factor G C-terminus DO83_RS05450 PF14492 Elongation Factor G, domain II DO83_RS05450 PF03144 Elongation factor Tu domain 2 DO83_RS05450 PF00009 Elongation factor Tu GTP binding domain DO83_RS05450 PF03764 Elongation factor G, domain IV DO83_RS05455 PF00177 Ribosomal protein S7p/S5e DO83_RS05460 PF00164 Ribosomal protein S12/S23 DO83_RS05465 PF04998 RNA polymerase Rpb1, domain 5 DO83_RS05465 PF04997 RNA polymerase Rpb1, domain 1 DO83_RS05465 PF00623 RNA polymerase Rpb1, domain 2 DO83_RS05465 PF05000 RNA polymerase Rpb1, domain 4 DO83_RS05465 PF04983 RNA polymerase Rpb1, domain 3 DO83_RS05470 PF04563 RNA polymerase beta subunit DO83_RS05470 PF10385 RNA polymerase beta subunit external 1 domain DO83_RS05470 PF04560 RNA polymerase Rpb2, domain 7 DO83_RS05470 PF04565 RNA polymerase Rpb2, domain 3 DO83_RS05470 PF00562 RNA polymerase Rpb2, domain 6 DO83_RS05470 PF04561 RNA polymerase Rpb2, domain 2 DO83_RS05485 PF13419 Haloacid dehalogenase-like hydrolase DO83_RS05490 PF01385 Probable transposase DO83_RS05490 PF07282 Putative transposase DNA-binding domain DO83_RS05490 PF12323 Helix-turn-helix domain DO83_RS05500 PF00209 Sodium:neurotransmitter symporter family DO83_RS05505 PF01964 Radical SAM ThiC family DO83_RS05515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DO83_RS05515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DO83_RS05520 PF16320 Ribosomal protein L7/L12 dimerisation domain DO83_RS05520 PF00542 Ribosomal protein L7/L12 C-terminal domain DO83_RS05525 PF00466 Ribosomal protein L10 DO83_RS05530 PF00687 Ribosomal protein L1p/L10e family DO83_RS05535 PF00298 Ribosomal protein L11, RNA binding domain DO83_RS05535 PF03946 Ribosomal protein L11, N-terminal domain DO83_RS05540 PF00467 KOW motif DO83_RS05540 PF02357 Transcription termination factor nusG DO83_RS05550 PF00471 Ribosomal protein L33 DO83_RS05565 PF14489 QueF-like protein DO83_RS05570 PF00990 Diguanylate cyclase, GGDEF domain DO83_RS05570 PF00498 FHA domain DO83_RS05570 PF00563 EAL domain DO83_RS05580 PF00293 NUDIX domain DO83_RS05595 PF00005 ABC transporter DO83_RS05595 PF00664 ABC transporter transmembrane region DO83_RS05605 PF02833 DHHA2 domain DO83_RS05605 PF00571 CBS domain DO83_RS05605 PF07085 DRTGG domain DO83_RS05605 PF01368 DHH family DO83_RS05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05610 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS05615 PF00072 Response regulator receiver domain DO83_RS05615 PF00486 Transcriptional regulatory protein, C terminal DO83_RS05630 PF00072 Response regulator receiver domain DO83_RS05630 PF00672 HAMP domain DO83_RS05630 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DO83_RS05630 PF01627 Hpt domain DO83_RS05640 PF00672 HAMP domain DO83_RS05640 PF00072 Response regulator receiver domain DO83_RS05640 PF01627 Hpt domain DO83_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05640 PF17149 Periplasmic sensor domain found in signal transduction proteins DO83_RS05640 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05650 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS05650 PF09308 LuxQ, periplasmic DO83_RS05650 PF00072 Response regulator receiver domain DO83_RS05660 PF01235 Sodium:alanine symporter family DO83_RS05665 PF01554 MatE DO83_RS05675 PF03063 Prismane/CO dehydrogenase family DO83_RS05715 PF01047 MarR family DO83_RS05720 PF01638 HxlR-like helix-turn-helix DO83_RS05730 PF00248 Aldo/keto reductase family DO83_RS05735 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS05735 PF12464 Maltose acetyltransferase DO83_RS05745 PF13411 MerR HTH family regulatory protein DO83_RS05755 PF01381 Helix-turn-helix DO83_RS05765 PF03575 Peptidase family S51 DO83_RS05780 PF08241 Methyltransferase domain DO83_RS05785 PF09334 tRNA synthetases class I (M) DO83_RS05785 PF01588 Putative tRNA binding domain DO83_RS05790 PF02899 Phage integrase, N-terminal SAM-like domain DO83_RS05790 PF00589 Phage integrase family DO83_RS05840 PF00589 Phage integrase family DO83_RS05840 PF02920 DNA binding domain of tn916 integrase DO83_RS05870 PF00005 ABC transporter DO83_RS05875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05875 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS05880 PF00072 Response regulator receiver domain DO83_RS05880 PF00486 Transcriptional regulatory protein, C terminal DO83_RS05895 PF00005 ABC transporter DO83_RS05910 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05910 PF07689 KaiB domain DO83_RS05915 PF00072 Response regulator receiver domain DO83_RS05915 PF00486 Transcriptional regulatory protein, C terminal DO83_RS05925 PF00072 Response regulator receiver domain DO83_RS05925 PF00486 Transcriptional regulatory protein, C terminal DO83_RS05945 PF00005 ABC transporter DO83_RS05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS05955 PF00072 Response regulator receiver domain DO83_RS05955 PF00486 Transcriptional regulatory protein, C terminal DO83_RS05990 PF00072 Response regulator receiver domain DO83_RS05990 PF00486 Transcriptional regulatory protein, C terminal DO83_RS05995 PF00005 ABC transporter DO83_RS06005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS06005 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS06030 PF13419 Haloacid dehalogenase-like hydrolase DO83_RS06035 PF02581 Thiamine monophosphate synthase DO83_RS06045 PF03070 TENA/THI-4/PQQC family DO83_RS06100 PF00717 Peptidase S24-like DO83_RS06100 PF01726 LexA DNA binding domain DO83_RS06105 PF00817 impB/mucB/samB family DO83_RS06105 PF11799 impB/mucB/samB family C-terminal domain DO83_RS06125 PF09334 tRNA synthetases class I (M) DO83_RS06125 PF01588 Putative tRNA binding domain DO83_RS06135 PF01661 Macro domain DO83_RS06145 PF00072 Response regulator receiver domain DO83_RS06145 PF00486 Transcriptional regulatory protein, C terminal DO83_RS06155 PF00005 ABC transporter DO83_RS06160 PF07702 UTRA domain DO83_RS06160 PF00392 Bacterial regulatory proteins, gntR family DO83_RS06225 PF12848 ABC transporter DO83_RS06225 PF00005 ABC transporter DO83_RS06280 PF03432 Relaxase/Mobilisation nuclease domain DO83_RS06305 PF04002 RadC-like JAB domain DO83_RS06315 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain DO83_RS06315 PF00746 LPXTG cell wall anchor motif DO83_RS06315 PF18002 T6 antigen Ig like domain DO83_RS06315 PF17802 Prealbumin-like fold domain DO83_RS06365 PF00152 tRNA synthetases class II (D, K and N) DO83_RS06365 PF01336 OB-fold nucleic acid binding domain DO83_RS06370 PF01272 Transcription elongation factor, GreA/GreB, C-term DO83_RS06370 PF03449 Transcription elongation factor, N-terminal DO83_RS06375 PF01207 Dihydrouridine synthase (Dus) DO83_RS06380 PF03309 Type III pantothenate kinase DO83_RS06390 PF02237 Biotin protein ligase C terminal domain DO83_RS06390 PF03099 Biotin/lipoate A/B protein ligase family DO83_RS06390 PF08279 HTH domain DO83_RS06395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DO83_RS06395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DO83_RS06405 PF01145 SPFH domain / Band 7 family DO83_RS06415 PF08032 RNA 2'-O ribose methyltransferase substrate binding DO83_RS06415 PF00588 SpoU rRNA Methylase family DO83_RS06420 PF02080 TrkA-C domain DO83_RS06420 PF02254 TrkA-N domain DO83_RS06425 PF02386 Cation transport protein DO83_RS06430 PF00365 Phosphofructokinase DO83_RS06435 PF07733 Bacterial DNA polymerase III alpha NTPase domain DO83_RS06435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DO83_RS06435 PF01336 OB-fold nucleic acid binding domain DO83_RS06435 PF02811 PHP domain DO83_RS06435 PF14579 Helix-hairpin-helix motif DO83_RS06440 PF01225 Mur ligase family, catalytic domain DO83_RS06440 PF02875 Mur ligase family, glutamate ligase domain DO83_RS06440 PF08245 Mur ligase middle domain DO83_RS06445 PF13722 5TM C-terminal transporter carbon starvation CstA DO83_RS06445 PF02554 Carbon starvation protein CstA DO83_RS06455 PF00209 Sodium:neurotransmitter symporter family DO83_RS06465 PF00342 Phosphoglucose isomerase DO83_RS06480 PF00381 PTS HPr component phosphorylation site DO83_RS06485 PF02650 WhiA C-terminal HTH domain DO83_RS06485 PF10298 WhiA N-terminal LAGLIDADG-like domain DO83_RS06485 PF14527 WhiA LAGLIDADG-like domain DO83_RS06490 PF03668 P-loop ATPase protein family DO83_RS06495 PF01565 FAD binding domain DO83_RS06495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DO83_RS06500 PF00480 ROK family DO83_RS06505 PF07475 HPr Serine kinase C-terminal domain DO83_RS06505 PF02603 HPr Serine kinase N terminus DO83_RS06510 PF08459 UvrC Helix-hairpin-helix N-terminal DO83_RS06510 PF12826 Helix-hairpin-helix motif DO83_RS06510 PF02151 UvrB/uvrC motif DO83_RS06510 PF01541 GIY-YIG catalytic domain DO83_RS06515 PF04055 Radical SAM superfamily DO83_RS06520 PF03477 ATP cone domain DO83_RS06520 PF13597 Anaerobic ribonucleoside-triphosphate reductase DO83_RS06535 PF03323 Bacillus/Clostridium GerA spore germination protein DO83_RS06545 PF00005 ABC transporter DO83_RS06545 PF00664 ABC transporter transmembrane region DO83_RS06550 PF00664 ABC transporter transmembrane region DO83_RS06550 PF00005 ABC transporter DO83_RS06550 PF08021 Siderophore-interacting FAD-binding domain DO83_RS06550 PF04954 Siderophore-interacting protein DO83_RS06555 PF12833 Helix-turn-helix domain DO83_RS06560 PF01522 Polysaccharide deacetylase DO83_RS06560 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DO83_RS06565 PF01979 Amidohydrolase family DO83_RS06565 PF13382 Adenine deaminase C-terminal domain DO83_RS06595 PF07729 FCD domain DO83_RS06595 PF00392 Bacterial regulatory proteins, gntR family DO83_RS06600 PF00288 GHMP kinases N terminal domain DO83_RS06600 PF08544 GHMP kinases C terminal DO83_RS06605 PF01476 LysM domain DO83_RS06605 PF01471 Putative peptidoglycan binding domain DO83_RS06605 PF01510 N-acetylmuramoyl-L-alanine amidase DO83_RS06610 PF06257 Biofilm formation stimulator VEG DO83_RS06615 PF00375 Sodium:dicarboxylate symporter family DO83_RS06620 PF08220 DeoR-like helix-turn-helix domain DO83_RS06620 PF00455 DeoR C terminal sensor domain DO83_RS06625 PF00248 Aldo/keto reductase family DO83_RS06630 PF00294 pfkB family carbohydrate kinase DO83_RS06635 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS06640 PF00107 Zinc-binding dehydrogenase DO83_RS06640 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS06645 PF00083 Sugar (and other) transporter DO83_RS06650 PF00834 Ribulose-phosphate 3 epimerase family DO83_RS06655 PF00107 Zinc-binding dehydrogenase DO83_RS06655 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS06665 PF01434 Peptidase family M41 DO83_RS06665 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS06665 PF17862 AAA+ lid domain DO83_RS06665 PF06480 FtsH Extracellular DO83_RS06675 PF02885 Glycosyl transferase family, helical bundle domain DO83_RS06675 PF00591 Glycosyl transferase family, a/b domain DO83_RS06675 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DO83_RS06685 PF01548 Transposase DO83_RS06685 PF02371 Transposase IS116/IS110/IS902 family DO83_RS06690 PF00005 ABC transporter DO83_RS06690 PF00664 ABC transporter transmembrane region DO83_RS06695 PF00664 ABC transporter transmembrane region DO83_RS06695 PF00005 ABC transporter DO83_RS06705 PF04055 Radical SAM superfamily DO83_RS06705 PF06968 Biotin and Thiamin Synthesis associated domain DO83_RS06715 PF01791 DeoC/LacD family aldolase DO83_RS06725 PF02574 Homocysteine S-methyltransferase DO83_RS06730 PF01235 Sodium:alanine symporter family DO83_RS06735 PF13411 MerR HTH family regulatory protein DO83_RS06740 PF01869 BadF/BadG/BcrA/BcrD ATPase family DO83_RS06750 PF01554 MatE DO83_RS06755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS06755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS06760 PF03613 PTS system mannose/fructose/sorbose family IID component DO83_RS06765 PF03609 PTS system sorbose-specific iic component DO83_RS06770 PF03830 PTS system sorbose subfamily IIB component DO83_RS06780 PF00158 Sigma-54 interaction domain DO83_RS06780 PF00874 PRD domain DO83_RS06785 PF00588 SpoU rRNA Methylase family DO83_RS06790 PF00155 Aminotransferase class I and II DO83_RS06795 PF01037 Lrp/AsnC ligand binding domain DO83_RS06800 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DO83_RS06800 PF02769 AIR synthase related protein, C-terminal domain DO83_RS06800 PF00586 AIR synthase related protein, N-terminal domain DO83_RS06810 PF00929 Exonuclease DO83_RS06810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DO83_RS06810 PF11490 DNA polymerase III polC-type N-terminus II DO83_RS06810 PF14579 Helix-hairpin-helix motif DO83_RS06810 PF02811 PHP domain DO83_RS06810 PF07733 Bacterial DNA polymerase III alpha NTPase domain DO83_RS06825 PF00440 Bacterial regulatory proteins, tetR family DO83_RS06825 PF17934 Tetracyclin repressor-like, C-terminal domain DO83_RS06840 PF00005 ABC transporter DO83_RS06845 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS06845 PF13426 PAS domain DO83_RS06845 PF00672 HAMP domain DO83_RS06850 PF00486 Transcriptional regulatory protein, C terminal DO83_RS06850 PF00072 Response regulator receiver domain DO83_RS06855 PF01938 TRAM domain DO83_RS06855 PF05958 tRNA (Uracil-5-)-methyltransferase DO83_RS06860 PF01336 OB-fold nucleic acid binding domain DO83_RS06860 PF01966 HD domain DO83_RS06865 PF00488 MutS domain V DO83_RS06865 PF01713 Smr domain DO83_RS06875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS06875 PF02378 Phosphotransferase system, EIIC DO83_RS06875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS06880 PF17155 Gammaproteobacterial periplasmic sensor domain DO83_RS06880 PF00990 Diguanylate cyclase, GGDEF domain DO83_RS06885 PF08546 Ketopantoate reductase PanE/ApbA C terminal DO83_RS06885 PF02558 Ketopantoate reductase PanE/ApbA DO83_RS06890 PF00448 SRP54-type protein, GTPase domain DO83_RS06890 PF02881 SRP54-type protein, helical bundle domain DO83_RS06895 PF00367 phosphotransferase system, EIIB DO83_RS06895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS06895 PF02378 Phosphotransferase system, EIIC DO83_RS06900 PF01418 Helix-turn-helix domain, rpiR family DO83_RS06900 PF01380 SIS domain DO83_RS06905 PF01418 Helix-turn-helix domain, rpiR family DO83_RS06905 PF01380 SIS domain DO83_RS06910 PF02378 Phosphotransferase system, EIIC DO83_RS06910 PF00367 phosphotransferase system, EIIB DO83_RS06915 PF02056 Family 4 glycosyl hydrolase DO83_RS06915 PF11975 Family 4 glycosyl hydrolase C-terminal domain DO83_RS06920 PF00958 GMP synthase C terminal domain DO83_RS06920 PF00117 Glutamine amidotransferase class-I DO83_RS06920 PF02540 NAD synthase DO83_RS06925 PF00438 S-adenosylmethionine synthetase, N-terminal domain DO83_RS06925 PF02772 S-adenosylmethionine synthetase, central domain DO83_RS06925 PF02773 S-adenosylmethionine synthetase, C-terminal domain DO83_RS06935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DO83_RS06940 PF01202 Shikimate kinase DO83_RS06945 PF01613 Flavin reductase like domain DO83_RS06950 PF01230 HIT domain DO83_RS06955 PF13662 Toprim domain DO83_RS06955 PF02132 RecR protein DO83_RS06960 PF02575 YbaB/EbfC DNA-binding family DO83_RS06965 PF12169 DNA polymerase III subunits gamma and tau domain III DO83_RS06970 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DO83_RS06970 PF17203 Single cache domain 3 DO83_RS06970 PF00989 PAS fold DO83_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS06975 PF01694 Rhomboid family DO83_RS07015 PF00437 Type II/IV secretion system protein DO83_RS07035 PF06207 Protein of unknown function (DUF1002) DO83_RS07045 PF00535 Glycosyl transferase family 2 DO83_RS07050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DO83_RS07050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DO83_RS07055 PF01554 MatE DO83_RS07075 PF00005 ABC transporter DO83_RS07080 PF00392 Bacterial regulatory proteins, gntR family DO83_RS07095 PF09424 Yqey-like protein DO83_RS07105 PF00152 tRNA synthetases class II (D, K and N) DO83_RS07115 PF00230 Major intrinsic protein DO83_RS07120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DO83_RS07120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DO83_RS07125 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DO83_RS07125 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DO83_RS07135 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS07135 PF04324 BFD-like [2Fe-2S] binding domain DO83_RS07140 PF01266 FAD dependent oxidoreductase DO83_RS07145 PF00356 Bacterial regulatory proteins, lacI family DO83_RS07150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS07150 PF00381 PTS HPr component phosphorylation site DO83_RS07155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS07155 PF02378 Phosphotransferase system, EIIC DO83_RS07160 PF01232 Mannitol dehydrogenase Rossmann domain DO83_RS07160 PF08125 Mannitol dehydrogenase C-terminal domain DO83_RS07165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS07165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS07165 PF00874 PRD domain DO83_RS07165 PF05043 Mga helix-turn-helix domain DO83_RS07165 PF08279 HTH domain DO83_RS07230 PF06866 Protein of unknown function (DUF1256) DO83_RS07250 PF00692 dUTPase DO83_RS07255 PF01522 Polysaccharide deacetylase DO83_RS07265 PF01048 Phosphorylase superfamily DO83_RS07275 PF04101 Glycosyltransferase family 28 C-terminal domain DO83_RS07275 PF03033 Glycosyltransferase family 28 N-terminal domain DO83_RS07290 PF12801 4Fe-4S binding domain DO83_RS07305 PF02424 ApbE family DO83_RS07330 PF00294 pfkB family carbohydrate kinase DO83_RS07335 PF00455 DeoR C terminal sensor domain DO83_RS07335 PF08220 DeoR-like helix-turn-helix domain DO83_RS07345 PF00005 ABC transporter DO83_RS07350 PF07883 Cupin domain DO83_RS07355 PF02811 PHP domain DO83_RS07360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS07365 PF00072 Response regulator receiver domain DO83_RS07365 PF00486 Transcriptional regulatory protein, C terminal DO83_RS07370 PF02403 Seryl-tRNA synthetase N-terminal domain DO83_RS07370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DO83_RS07385 PF13614 AAA domain DO83_RS07390 PF05746 DALR anticodon binding domain DO83_RS07390 PF03485 Arginyl tRNA synthetase N terminal domain DO83_RS07390 PF00750 tRNA synthetases class I (R) DO83_RS07400 PF02527 rRNA small subunit methyltransferase G DO83_RS07405 PF13932 GidA associated domain DO83_RS07405 PF01134 Glucose inhibited division protein A DO83_RS07410 PF12631 MnmE helical domain DO83_RS07410 PF01926 50S ribosome-binding GTPase DO83_RS07410 PF10396 GTP-binding protein TrmE N-terminus DO83_RS07420 PF02096 60Kd inner membrane protein DO83_RS07425 PF01809 Putative membrane protein insertion efficiency factor DO83_RS07430 PF00825 Ribonuclease P DO83_RS07435 PF00468 Ribosomal protein L34 DO83_RS07440 PF08299 Bacterial dnaA protein helix-turn-helix DO83_RS07440 PF00308 Bacterial dnaA protein DO83_RS07440 PF11638 DnaA N-terminal domain DO83_RS07445 PF02767 DNA polymerase III beta subunit, central domain DO83_RS07445 PF02768 DNA polymerase III beta subunit, C-terminal domain DO83_RS07445 PF00712 DNA polymerase III beta subunit, N-terminal domain DO83_RS07455 PF02463 RecF/RecN/SMC N terminal domain DO83_RS07460 PF01751 Toprim domain DO83_RS07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS07460 PF00986 DNA gyrase B subunit, carboxyl terminus DO83_RS07460 PF00204 DNA gyrase B DO83_RS07465 PF00521 DNA gyrase/topoisomerase IV, subunit A DO83_RS07465 PF03989 DNA gyrase C-terminal domain, beta-propeller DO83_RS07470 PF05681 Fumarate hydratase (Fumerase) DO83_RS07530 PF01276 Orn/Lys/Arg decarboxylase, major domain DO83_RS07530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DO83_RS07535 PF02223 Thymidylate kinase DO83_RS07540 PF09115 DNA polymerase III, delta subunit, C terminal DO83_RS07545 PF04468 PSP1 C-terminal conserved region DO83_RS07550 PF05175 Methyltransferase small domain DO83_RS07555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DO83_RS07560 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DO83_RS07560 PF18277 AbrB C-terminal domain DO83_RS07565 PF09334 tRNA synthetases class I (M) DO83_RS07565 PF01588 Putative tRNA binding domain DO83_RS07575 PF01293 Phosphoenolpyruvate carboxykinase DO83_RS07580 PF01047 MarR family DO83_RS07600 PF00266 Aminotransferase class-V DO83_RS07605 PF01740 STAS domain DO83_RS07605 PF00916 Sulfate permease family DO83_RS07615 PF07670 Nucleoside recognition DO83_RS07630 PF01026 TatD related DNase DO83_RS07635 PF00398 Ribosomal RNA adenine dimethylase DO83_RS07645 PF14437 MafB19-like deaminase DO83_RS07660 PF04607 Region found in RelA / SpoT proteins DO83_RS07675 PF00912 Transglycosylase DO83_RS07675 PF00905 Penicillin binding protein transpeptidase domain DO83_RS07680 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DO83_RS07680 PF14572 Phosphoribosyl synthetase-associated domain DO83_RS07700 PF08245 Mur ligase middle domain DO83_RS07700 PF02875 Mur ligase family, glutamate ligase domain DO83_RS07700 PF01225 Mur ligase family, catalytic domain DO83_RS07705 PF04026 SpoVG DO83_RS07715 PF01250 Ribosomal protein S6 DO83_RS07720 PF00436 Single-strand binding protein family DO83_RS07725 PF01084 Ribosomal protein S18 DO83_RS07735 PF01281 Ribosomal protein L9, N-terminal domain DO83_RS07735 PF03948 Ribosomal protein L9, C-terminal domain DO83_RS07740 PF03796 DnaB-like helicase C terminal domain DO83_RS07740 PF00772 DnaB-like helicase N terminal domain DO83_RS07745 PF00156 Phosphoribosyl transferase domain DO83_RS07750 PF00730 HhH-GPD superfamily base excision DNA repair protein DO83_RS07750 PF14815 NUDIX domain DO83_RS07755 PF00497 Bacterial extracellular solute-binding proteins, family 3 DO83_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS07765 PF00005 ABC transporter DO83_RS07770 PF00990 Diguanylate cyclase, GGDEF domain DO83_RS07770 PF00072 Response regulator receiver domain DO83_RS07775 PF00497 Bacterial extracellular solute-binding proteins, family 3 DO83_RS07785 PF00072 Response regulator receiver domain DO83_RS07785 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS07785 PF01627 Hpt domain DO83_RS07785 PF17149 Periplasmic sensor domain found in signal transduction proteins DO83_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS07785 PF00672 HAMP domain DO83_RS07820 PF02874 ATP synthase alpha/beta family, beta-barrel domain DO83_RS07820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS07820 PF16886 ATPsynthase alpha/beta subunit N-term extension DO83_RS07825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS07825 PF02874 ATP synthase alpha/beta family, beta-barrel domain DO83_RS07830 PF01813 ATP synthase subunit D DO83_RS07835 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS07840 PF01380 SIS domain DO83_RS07840 PF01418 Helix-turn-helix domain, rpiR family DO83_RS07845 PF00294 pfkB family carbohydrate kinase DO83_RS07850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS07850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS07855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS07855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS07875 PF00654 Voltage gated chloride channel DO83_RS07885 PF00293 NUDIX domain DO83_RS07900 PF03616 Sodium/glutamate symporter DO83_RS07910 PF13411 MerR HTH family regulatory protein DO83_RS07915 PF02779 Transketolase, pyrimidine binding domain DO83_RS07915 PF02780 Transketolase, C-terminal domain DO83_RS07915 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DO83_RS07920 PF00365 Phosphofructokinase DO83_RS07925 PF04198 Putative sugar-binding domain DO83_RS07925 PF13936 Helix-turn-helix domain DO83_RS07930 PF00107 Zinc-binding dehydrogenase DO83_RS07930 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS07935 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS07940 PF08264 Anticodon-binding domain of tRNA DO83_RS07940 PF00133 tRNA synthetases class I (I, L, M and V) DO83_RS07955 PF00069 Protein kinase domain DO83_RS07975 PF00391 PEP-utilising enzyme, mobile domain DO83_RS07975 PF00224 Pyruvate kinase, barrel domain DO83_RS07975 PF02887 Pyruvate kinase, alpha/beta domain DO83_RS07980 PF00128 Alpha amylase, catalytic domain DO83_RS07980 PF16657 Maltogenic Amylase, C-terminal domain DO83_RS07995 PF01209 ubiE/COQ5 methyltransferase family DO83_RS08005 PF13350 Tyrosine phosphatase family DO83_RS08030 PF06480 FtsH Extracellular DO83_RS08030 PF17862 AAA+ lid domain DO83_RS08030 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS08030 PF01434 Peptidase family M41 DO83_RS08035 PF01554 MatE DO83_RS08070 PF00892 EamA-like transporter family DO83_RS08110 PF00899 ThiF family DO83_RS08115 PF03591 AzlC protein DO83_RS08120 PF05437 Branched-chain amino acid transport protein (AzlD) DO83_RS08125 PF01053 Cys/Met metabolism PLP-dependent enzyme DO83_RS08135 PF00291 Pyridoxal-phosphate dependent enzyme DO83_RS08140 PF00899 ThiF family DO83_RS08150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS08150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS08150 PF02378 Phosphotransferase system, EIIC DO83_RS08155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS08160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS08165 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS08170 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS08175 PF00480 ROK family DO83_RS08180 PF01380 SIS domain DO83_RS08180 PF01418 Helix-turn-helix domain, rpiR family DO83_RS08185 PF01380 SIS domain DO83_RS08185 PF01418 Helix-turn-helix domain, rpiR family DO83_RS08190 PF02056 Family 4 glycosyl hydrolase DO83_RS08190 PF11975 Family 4 glycosyl hydrolase C-terminal domain DO83_RS08195 PF11975 Family 4 glycosyl hydrolase C-terminal domain DO83_RS08195 PF02056 Family 4 glycosyl hydrolase DO83_RS08200 PF01263 Aldose 1-epimerase DO83_RS08205 PF02378 Phosphotransferase system, EIIC DO83_RS08205 PF00367 phosphotransferase system, EIIB DO83_RS08205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS08220 PF00072 Response regulator receiver domain DO83_RS08220 PF00486 Transcriptional regulatory protein, C terminal DO83_RS08225 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS08235 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DO83_RS08235 PF00877 NlpC/P60 family DO83_RS08255 PF00860 Permease family DO83_RS08260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DO83_RS08260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DO83_RS08260 PF02142 MGS-like domain DO83_RS08270 PF13419 Haloacid dehalogenase-like hydrolase DO83_RS08285 PF01554 MatE DO83_RS08295 PF00730 HhH-GPD superfamily base excision DNA repair protein DO83_RS08295 PF00633 Helix-hairpin-helix motif DO83_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS08310 PF03466 LysR substrate binding domain DO83_RS08320 PF00482 Type II secretion system (T2SS), protein F DO83_RS08345 PF00437 Type II/IV secretion system protein DO83_RS08360 PF01799 [2Fe-2S] binding domain DO83_RS08360 PF00111 2Fe-2S iron-sulfur cluster binding domain DO83_RS08365 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DO83_RS08365 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DO83_RS08365 PF01799 [2Fe-2S] binding domain DO83_RS08375 PF00156 Phosphoribosyl transferase domain DO83_RS08380 PF18152 DAHP synthase ferredoxin-like domain DO83_RS08380 PF00793 DAHP synthetase I family DO83_RS08385 PF01195 Peptidyl-tRNA hydrolase DO83_RS08390 PF03461 TRCF domain DO83_RS08390 PF17757 UvrB interaction domain DO83_RS08390 PF00271 Helicase conserved C-terminal domain DO83_RS08390 PF00270 DEAD/DEAH box helicase DO83_RS08390 PF02559 CarD-like/TRCF domain DO83_RS08400 PF08220 DeoR-like helix-turn-helix domain DO83_RS08400 PF00455 DeoR C terminal sensor domain DO83_RS08405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DO83_RS08405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DO83_RS08410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS08425 PF03611 PTS system sugar-specific permease component DO83_RS08430 PF13685 Iron-containing alcohol dehydrogenase DO83_RS08435 PF00596 Class II Aldolase and Adducin N-terminal domain DO83_RS08440 PF13344 Haloacid dehalogenase-like hydrolase DO83_RS08445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DO83_RS08445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DO83_RS08445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DO83_RS08445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DO83_RS08460 PF07702 UTRA domain DO83_RS08460 PF00392 Bacterial regulatory proteins, gntR family DO83_RS08480 PF08125 Mannitol dehydrogenase C-terminal domain DO83_RS08480 PF01232 Mannitol dehydrogenase Rossmann domain DO83_RS08485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS08485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS08520 PF00248 Aldo/keto reductase family DO83_RS08525 PF04073 Aminoacyl-tRNA editing domain DO83_RS08535 PF02371 Transposase IS116/IS110/IS902 family DO83_RS08535 PF01548 Transposase DO83_RS08540 PF00375 Sodium:dicarboxylate symporter family DO83_RS08555 PF02386 Cation transport protein DO83_RS08560 PF02254 TrkA-N domain DO83_RS08560 PF02080 TrkA-C domain DO83_RS08565 PF13493 Domain of unknown function (DUF4118) DO83_RS08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS08565 PF02702 Osmosensitive K+ channel His kinase sensor domain DO83_RS08565 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS08570 PF00072 Response regulator receiver domain DO83_RS08570 PF00486 Transcriptional regulatory protein, C terminal DO83_RS08575 PF03313 Serine dehydratase alpha chain DO83_RS08580 PF03315 Serine dehydratase beta chain DO83_RS08585 PF00375 Sodium:dicarboxylate symporter family DO83_RS08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS08590 PF03466 LysR substrate binding domain DO83_RS08615 PF01556 DnaJ C terminal domain DO83_RS08615 PF00684 DnaJ central domain DO83_RS08615 PF00226 DnaJ domain DO83_RS08625 PF00465 Iron-containing alcohol dehydrogenase DO83_RS08630 PF00874 PRD domain DO83_RS08630 PF08279 HTH domain DO83_RS08630 PF05043 Mga helix-turn-helix domain DO83_RS08630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS08635 PF02126 Phosphotriesterase family DO83_RS08650 PF03611 PTS system sugar-specific permease component DO83_RS08655 PF13378 Enolase C-terminal domain-like DO83_RS08655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DO83_RS08660 PF01081 KDPG and KHG aldolase DO83_RS08665 PF01554 MatE DO83_RS08670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DO83_RS08670 PF09180 Prolyl-tRNA synthetase, C-terminal DO83_RS08670 PF03129 Anticodon binding domain DO83_RS08675 PF12627 Probable RNA and SrmB- binding site of polymerase A DO83_RS08675 PF01743 Poly A polymerase head domain DO83_RS08675 PF13735 tRNA nucleotidyltransferase domain 2 putative DO83_RS08680 PF03009 Glycerophosphoryl diester phosphodiesterase family DO83_RS08685 PF07478 D-ala D-ala ligase C-terminus DO83_RS08685 PF01820 D-ala D-ala ligase N-terminus DO83_RS08690 PF01177 Asp/Glu/Hydantoin racemase DO83_RS08700 PF02702 Osmosensitive K+ channel His kinase sensor domain DO83_RS08700 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS08700 PF13493 Domain of unknown function (DUF4118) DO83_RS08705 PF00072 Response regulator receiver domain DO83_RS08705 PF00486 Transcriptional regulatory protein, C terminal DO83_RS08710 PF00909 Ammonium Transporter Family DO83_RS08715 PF00909 Ammonium Transporter Family DO83_RS08720 PF00543 Nitrogen regulatory protein P-II DO83_RS08745 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS08760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DO83_RS08760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DO83_RS08765 PF03315 Serine dehydratase beta chain DO83_RS08765 PF01842 ACT domain DO83_RS08770 PF03313 Serine dehydratase alpha chain DO83_RS08775 PF03932 CutC family DO83_RS08785 PF01758 Sodium Bile acid symporter family DO83_RS08790 PF09297 NADH pyrophosphatase zinc ribbon domain DO83_RS08790 PF00293 NUDIX domain DO83_RS08795 PF00535 Glycosyl transferase family 2 DO83_RS08800 PF09586 Bacterial membrane protein YfhO DO83_RS08810 PF01476 LysM domain DO83_RS08810 PF02369 Bacterial Ig-like domain (group 1) DO83_RS08810 PF02368 Bacterial Ig-like domain (group 2) DO83_RS08810 PF11924 Inverse autotransporter, beta-domain DO83_RS08810 PF07979 Intimin C-type lectin domain DO83_RS08830 PF04397 LytTr DNA-binding domain DO83_RS08830 PF00072 Response regulator receiver domain DO83_RS08860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DO83_RS08865 PF02618 YceG-like family DO83_RS08870 PF10371 Domain of unknown function DO83_RS08870 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DO83_RS08870 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DO83_RS08870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DO83_RS08870 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DO83_RS08870 PF12838 4Fe-4S dicluster domain DO83_RS08875 PF01336 OB-fold nucleic acid binding domain DO83_RS08875 PF02938 GAD domain DO83_RS08875 PF00152 tRNA synthetases class II (D, K and N) DO83_RS08880 PF00309 Sigma-54 factor, Activator interacting domain (AID) DO83_RS08880 PF04963 Sigma-54 factor, core binding domain DO83_RS08880 PF04552 Sigma-54, DNA binding domain DO83_RS08885 PF03610 PTS system fructose IIA component DO83_RS08890 PF00874 PRD domain DO83_RS08890 PF00158 Sigma-54 interaction domain DO83_RS08890 PF03610 PTS system fructose IIA component DO83_RS08895 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS08905 PF00107 Zinc-binding dehydrogenase DO83_RS08905 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS08910 PF03830 PTS system sorbose subfamily IIB component DO83_RS08915 PF03609 PTS system sorbose-specific iic component DO83_RS08920 PF03613 PTS system mannose/fructose/sorbose family IID component DO83_RS08925 PF08125 Mannitol dehydrogenase C-terminal domain DO83_RS08925 PF01232 Mannitol dehydrogenase Rossmann domain DO83_RS08930 PF00248 Aldo/keto reductase family DO83_RS08935 PF00665 Integrase core domain DO83_RS08935 PF13333 Integrase core domain DO83_RS08960 PF00392 Bacterial regulatory proteins, gntR family DO83_RS08965 PF00005 ABC transporter DO83_RS08980 PF02690 Na+/Pi-cotransporter DO83_RS08985 PF00834 Ribulose-phosphate 3 epimerase family DO83_RS08990 PF10609 NUBPL iron-transfer P-loop NTPase DO83_RS09015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DO83_RS09015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DO83_RS09025 PF00301 Rubredoxin DO83_RS09035 PF02915 Rubrerythrin DO83_RS09040 PF00270 DEAD/DEAH box helicase DO83_RS09040 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DO83_RS09040 PF17191 RecG wedge domain DO83_RS09045 PF02445 Quinolinate synthetase A protein DO83_RS09050 PF00890 FAD binding domain DO83_RS09055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DO83_RS09055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DO83_RS09060 PF07228 Stage II sporulation protein E (SpoIIE) DO83_RS09065 PF01171 PP-loop family DO83_RS09065 PF11734 TilS substrate C-terminal domain DO83_RS09070 PF00156 Phosphoribosyl transferase domain DO83_RS09075 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS09075 PF06480 FtsH Extracellular DO83_RS09075 PF01434 Peptidase family M41 DO83_RS09075 PF17862 AAA+ lid domain DO83_RS09105 PF00005 ABC transporter DO83_RS09110 PF00550 Phosphopantetheine attachment site DO83_RS09115 PF00698 Acyl transferase domain DO83_RS09125 PF02801 Beta-ketoacyl synthase, C-terminal domain DO83_RS09125 PF00109 Beta-ketoacyl synthase, N-terminal domain DO83_RS09130 PF00364 Biotin-requiring enzyme DO83_RS09135 PF07977 FabA-like domain DO83_RS09140 PF02785 Biotin carboxylase C-terminal domain DO83_RS09140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DO83_RS09140 PF00289 Biotin carboxylase, N-terminal domain DO83_RS09145 PF01039 Carboxyl transferase domain DO83_RS09145 PF17848 Acetyl-coA carboxylase zinc finger domain DO83_RS09150 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DO83_RS09165 PF00338 Ribosomal protein S10p/S20e DO83_RS09170 PF00297 Ribosomal protein L3 DO83_RS09175 PF00573 Ribosomal protein L4/L1 family DO83_RS09180 PF00276 Ribosomal protein L23 DO83_RS09185 PF03947 Ribosomal Proteins L2, C-terminal domain DO83_RS09185 PF00181 Ribosomal Proteins L2, RNA binding domain DO83_RS09190 PF00203 Ribosomal protein S19 DO83_RS09195 PF00237 Ribosomal protein L22p/L17e DO83_RS09200 PF00189 Ribosomal protein S3, C-terminal domain DO83_RS09200 PF07650 KH domain DO83_RS09205 PF00252 Ribosomal protein L16p/L10e DO83_RS09210 PF00831 Ribosomal L29 protein DO83_RS09215 PF00366 Ribosomal protein S17 DO83_RS09220 PF00238 Ribosomal protein L14p/L23e DO83_RS09225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DO83_RS09225 PF00467 KOW motif DO83_RS09230 PF00673 ribosomal L5P family C-terminus DO83_RS09230 PF00281 Ribosomal protein L5 DO83_RS09235 PF00253 Ribosomal protein S14p/S29e DO83_RS09240 PF00410 Ribosomal protein S8 DO83_RS09245 PF00347 Ribosomal protein L6 DO83_RS09250 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DO83_RS09255 PF00333 Ribosomal protein S5, N-terminal domain DO83_RS09255 PF03719 Ribosomal protein S5, C-terminal domain DO83_RS09260 PF00327 Ribosomal protein L30p/L7e DO83_RS09265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DO83_RS09270 PF00344 SecY translocase DO83_RS09275 PF05191 Adenylate kinase, active site lid DO83_RS09280 PF00557 Metallopeptidase family M24 DO83_RS09285 PF01176 Translation initiation factor 1A / IF-1 DO83_RS09290 PF00444 Ribosomal protein L36 DO83_RS09295 PF00416 Ribosomal protein S13/S18 DO83_RS09300 PF00411 Ribosomal protein S11 DO83_RS09305 PF00163 Ribosomal protein S4/S9 N-terminal domain DO83_RS09305 PF01479 S4 domain DO83_RS09310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DO83_RS09310 PF01000 RNA polymerase Rpb3/RpoA insert domain DO83_RS09310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DO83_RS09315 PF01196 Ribosomal protein L17 DO83_RS09320 PF00005 ABC transporter DO83_RS09325 PF00005 ABC transporter DO83_RS09330 PF02361 Cobalt transport protein DO83_RS09335 PF01416 tRNA pseudouridine synthase DO83_RS09345 PF00572 Ribosomal protein L13 DO83_RS09350 PF00380 Ribosomal protein S9/S16 DO83_RS09360 PF00113 Enolase, C-terminal TIM barrel domain DO83_RS09360 PF03952 Enolase, N-terminal domain DO83_RS09375 PF01717 Cobalamin-independent synthase, Catalytic domain DO83_RS09385 PF00753 Metallo-beta-lactamase superfamily DO83_RS09385 PF00258 Flavodoxin DO83_RS09390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DO83_RS09395 PF04055 Radical SAM superfamily DO83_RS09405 PF00302 Chloramphenicol acetyltransferase DO83_RS09415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DO83_RS09415 PF00128 Alpha amylase, catalytic domain DO83_RS09415 PF02806 Alpha amylase, C-terminal all-beta domain DO83_RS09420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS09425 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DO83_RS09425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DO83_RS09430 PF02810 SEC-C motif DO83_RS09430 PF07517 SecA DEAD-like domain DO83_RS09430 PF01043 SecA preprotein cross-linking domain DO83_RS09430 PF07516 SecA Wing and Scaffold domain DO83_RS09435 PF03462 PCRF domain DO83_RS09435 PF00472 RF-1 domain DO83_RS09445 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase DO83_RS09445 PF01676 Metalloenzyme superfamily DO83_RS09450 PF00696 Amino acid kinase family DO83_RS09450 PF13840 ACT domain DO83_RS09455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DO83_RS09460 PF17674 HHH domain DO83_RS09460 PF16921 Tex protein YqgF-like domain DO83_RS09460 PF09371 Tex-like protein N-terminal domain DO83_RS09460 PF00575 S1 RNA binding domain DO83_RS09475 PF17853 GGDEF-like domain DO83_RS09475 PF13556 PucR C-terminal helix-turn-helix domain DO83_RS09475 PF05651 Putative sugar diacid recognition DO83_RS09480 PF00005 ABC transporter DO83_RS09485 PF18075 FtsX extracellular domain DO83_RS09485 PF02687 FtsX-like permease family DO83_RS09495 PF00595 PDZ domain DO83_RS09495 PF03572 Peptidase family S41 DO83_RS09500 PF00266 Aminotransferase class-V DO83_RS09510 PF02920 DNA binding domain of tn916 integrase DO83_RS09510 PF00589 Phage integrase family DO83_RS09515 PF09035 Excisionase from transposon Tn916 DO83_RS09560 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) DO83_RS09565 PF00398 Ribosomal RNA adenine dimethylase DO83_RS09590 PF00877 NlpC/P60 family DO83_RS09640 PF18106 Rolling Circle replication initiation protein N-terminal domain DO83_RS09640 PF02486 Replication initiation factor DO83_RS09695 PF02151 UvrB/uvrC motif DO83_RS09695 PF04851 Type III restriction enzyme, res subunit DO83_RS09695 PF00271 Helicase conserved C-terminal domain DO83_RS09695 PF12344 Ultra-violet resistance protein B DO83_RS09695 PF17757 UvrB interaction domain DO83_RS09700 PF17760 UvrA interaction domain DO83_RS09700 PF17755 UvrA DNA-binding domain DO83_RS09705 PF08220 DeoR-like helix-turn-helix domain DO83_RS09705 PF00455 DeoR C terminal sensor domain DO83_RS09710 PF02901 Pyruvate formate lyase-like DO83_RS09710 PF01228 Glycine radical DO83_RS09715 PF04055 Radical SAM superfamily DO83_RS09720 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DO83_RS09720 PF15714 Stage V sporulation protein T C-terminal, transcription factor DO83_RS09730 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DO83_RS09735 PF00814 Glycoprotease family DO83_RS09740 PF00583 Acetyltransferase (GNAT) family DO83_RS09745 PF00753 Metallo-beta-lactamase superfamily DO83_RS09750 PF00814 Glycoprotease family DO83_RS09755 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DO83_RS09835 PF00877 NlpC/P60 family DO83_RS09835 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DO83_RS09845 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS09850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS09850 PF02378 Phosphotransferase system, EIIC DO83_RS09850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS09855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS09860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS09860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS09870 PF13419 Haloacid dehalogenase-like hydrolase DO83_RS09875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DO83_RS09880 PF02502 Ribose/Galactose Isomerase DO83_RS09885 PF01261 Xylose isomerase-like TIM barrel DO83_RS09890 PF02733 Dak1 domain DO83_RS09895 PF02734 DAK2 domain DO83_RS09905 PF00005 ABC transporter DO83_RS09925 PF00117 Glutamine amidotransferase class-I DO83_RS09925 PF06418 CTP synthase N-terminus DO83_RS09940 PF00107 Zinc-binding dehydrogenase DO83_RS09940 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS09950 PF00403 Heavy-metal-associated domain DO83_RS09955 PF01022 Bacterial regulatory protein, arsR family DO83_RS09960 PF00742 Homoserine dehydrogenase DO83_RS09960 PF03447 Homoserine dehydrogenase, NAD binding domain DO83_RS09960 PF01842 ACT domain DO83_RS09975 PF00440 Bacterial regulatory proteins, tetR family DO83_RS09975 PF17922 Tetracyclin repressor-like, C-terminal domain DO83_RS10005 PF00425 chorismate binding enzyme DO83_RS10005 PF04715 Anthranilate synthase component I, N terminal region DO83_RS10010 PF00591 Glycosyl transferase family, a/b domain DO83_RS10010 PF02885 Glycosyl transferase family, helical bundle domain DO83_RS10010 PF00117 Glutamine amidotransferase class-I DO83_RS10015 PF00218 Indole-3-glycerol phosphate synthase DO83_RS10020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DO83_RS10025 PF00291 Pyridoxal-phosphate dependent enzyme DO83_RS10030 PF00290 Tryptophan synthase alpha chain DO83_RS10035 PF00155 Aminotransferase class I and II DO83_RS10040 PF00155 Aminotransferase class I and II DO83_RS10050 PF01594 AI-2E family transporter DO83_RS10055 PF00303 Thymidylate synthase DO83_RS10060 PF00186 Dihydrofolate reductase DO83_RS10075 PF01381 Helix-turn-helix DO83_RS10100 PF01471 Putative peptidoglycan binding domain DO83_RS10100 PF01510 N-acetylmuramoyl-L-alanine amidase DO83_RS10105 PF07508 Recombinase DO83_RS10105 PF00239 Resolvase, N terminal domain DO83_RS10105 PF13408 Recombinase zinc beta ribbon domain DO83_RS10110 PF01381 Helix-turn-helix DO83_RS10115 PF02811 PHP domain DO83_RS10115 PF07733 Bacterial DNA polymerase III alpha NTPase domain DO83_RS10115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DO83_RS10115 PF01336 OB-fold nucleic acid binding domain DO83_RS10115 PF11490 DNA polymerase III polC-type N-terminus II DO83_RS10115 PF00929 Exonuclease DO83_RS10115 PF14579 Helix-hairpin-helix motif DO83_RS10115 PF14480 DNA polymerase III polC-type N-terminus I DO83_RS10185 PF13614 AAA domain DO83_RS10260 PF00574 Clp protease DO83_RS10320 PF00877 NlpC/P60 family DO83_RS10335 PF04865 Baseplate J-like protein DO83_RS10350 PF00589 Phage integrase family DO83_RS10350 PF02899 Phage integrase, N-terminal SAM-like domain DO83_RS10400 PF04073 Aminoacyl-tRNA editing domain DO83_RS10405 PF00484 Carbonic anhydrase DO83_RS10435 PF00005 ABC transporter DO83_RS10445 PF00128 Alpha amylase, catalytic domain DO83_RS10445 PF02903 Alpha amylase, N-terminal ig-like domain DO83_RS10445 PF16657 Maltogenic Amylase, C-terminal domain DO83_RS10450 PF00013 KH domain DO83_RS10450 PF01966 HD domain DO83_RS10450 PF12072 Domain of unknown function (DUF3552) DO83_RS10455 PF00293 NUDIX domain DO83_RS10465 PF00793 DAHP synthetase I family DO83_RS10470 PF12822 ECF transporter, substrate-specific component DO83_RS10480 PF00300 Histidine phosphatase superfamily (branch 1) DO83_RS10490 PF07687 Peptidase dimerisation domain DO83_RS10490 PF01546 Peptidase family M20/M25/M40 DO83_RS10495 PF14821 Threonine synthase N terminus DO83_RS10495 PF00291 Pyridoxal-phosphate dependent enzyme DO83_RS10515 PF00069 Protein kinase domain DO83_RS10515 PF03793 PASTA domain DO83_RS10525 PF00575 S1 RNA binding domain DO83_RS10530 PF01264 Chorismate synthase DO83_RS10535 PF01702 Queuine tRNA-ribosyltransferase DO83_RS10545 PF02811 PHP domain DO83_RS10560 PF04055 Radical SAM superfamily DO83_RS10565 PF02355 Protein export membrane protein DO83_RS10565 PF07549 SecD/SecF GG Motif DO83_RS10570 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DO83_RS10570 PF17768 RecJ OB domain DO83_RS10570 PF02272 DHHA1 domain DO83_RS10570 PF01368 DHH family DO83_RS10620 PF02542 YgbB family DO83_RS10630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DO83_RS10630 PF10996 Beta-Casp domain DO83_RS10630 PF00753 Metallo-beta-lactamase superfamily DO83_RS10635 PF00849 RNA pseudouridylate synthase DO83_RS10635 PF01479 S4 domain DO83_RS10640 PF12826 Helix-hairpin-helix motif DO83_RS10640 PF03120 NAD-dependent DNA ligase OB-fold domain DO83_RS10640 PF00533 BRCA1 C Terminus (BRCT) domain DO83_RS10640 PF01653 NAD-dependent DNA ligase adenylation domain DO83_RS10645 PF04204 Homoserine O-succinyltransferase DO83_RS10655 PF02875 Mur ligase family, glutamate ligase domain DO83_RS10655 PF08245 Mur ligase middle domain DO83_RS10665 PF01740 STAS domain DO83_RS10670 PF13581 Histidine kinase-like ATPase domain DO83_RS10675 PF04542 Sigma-70 region 2 DO83_RS10675 PF04539 Sigma-70 region 3 DO83_RS10675 PF04545 Sigma-70, region 4 DO83_RS10680 PF07497 Rho termination factor, RNA-binding domain DO83_RS10680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DO83_RS10680 PF07498 Rho termination factor, N-terminal domain DO83_RS10685 PF01197 Ribosomal protein L31 DO83_RS10690 PF07136 Protein of unknown function (DUF1385) DO83_RS10695 PF17827 PrmC N-terminal domain DO83_RS10695 PF05175 Methyltransferase small domain DO83_RS10700 PF00472 RF-1 domain DO83_RS10700 PF03462 PCRF domain DO83_RS10705 PF02540 NAD synthase DO83_RS10705 PF00795 Carbon-nitrogen hydrolase DO83_RS10710 PF13407 Periplasmic binding protein domain DO83_RS10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS10715 PF07730 Histidine kinase DO83_RS10720 PF00196 Bacterial regulatory proteins, luxR family DO83_RS10720 PF00072 Response regulator receiver domain DO83_RS10745 PF03613 PTS system mannose/fructose/sorbose family IID component DO83_RS10755 PF02210 Laminin G domain DO83_RS10755 PF02368 Bacterial Ig-like domain (group 2) DO83_RS10755 PF08244 Glycosyl hydrolases family 32 C terminal DO83_RS10755 PF00251 Glycosyl hydrolases family 32 N-terminal domain DO83_RS10790 PF00072 Response regulator receiver domain DO83_RS10790 PF00486 Transcriptional regulatory protein, C terminal DO83_RS10795 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS10800 PF01915 Glycosyl hydrolase family 3 C-terminal domain DO83_RS10800 PF00933 Glycosyl hydrolase family 3 N terminal domain DO83_RS10805 PF13537 Glutamine amidotransferase domain DO83_RS10805 PF00156 Phosphoribosyl transferase domain DO83_RS10810 PF10397 Adenylosuccinate lyase C-terminus DO83_RS10810 PF00206 Lyase DO83_RS10830 PF17151 Periplasmic sensor domain DO83_RS10830 PF00990 Diguanylate cyclase, GGDEF domain DO83_RS10845 PF16199 Radical_SAM C-terminal domain DO83_RS10845 PF04055 Radical SAM superfamily DO83_RS10850 PF01263 Aldose 1-epimerase DO83_RS10855 PF00009 Elongation factor Tu GTP binding domain DO83_RS10855 PF03144 Elongation factor Tu domain 2 DO83_RS10855 PF16658 Class II release factor RF3, C-terminal domain DO83_RS10865 PF02706 Chain length determinant protein DO83_RS10870 PF13614 AAA domain DO83_RS10885 PF00707 Translation initiation factor IF-3, C-terminal domain DO83_RS10885 PF05198 Translation initiation factor IF-3, N-terminal domain DO83_RS10890 PF01632 Ribosomal protein L35 DO83_RS10895 PF00453 Ribosomal protein L20 DO83_RS10905 PF00072 Response regulator receiver domain DO83_RS10905 PF04397 LytTr DNA-binding domain DO83_RS10910 PF01048 Phosphorylase superfamily DO83_RS10915 PF01979 Amidohydrolase family DO83_RS10940 PF01261 Xylose isomerase-like TIM barrel DO83_RS10945 PF12706 Beta-lactamase superfamily domain DO83_RS10955 PF03419 Sporulation factor SpoIIGA DO83_RS10960 PF04542 Sigma-70 region 2 DO83_RS10960 PF04545 Sigma-70, region 4 DO83_RS10970 PF05193 Peptidase M16 inactive domain DO83_RS10970 PF08367 Peptidase M16C associated DO83_RS10970 PF00675 Insulinase (Peptidase family M16) DO83_RS10975 PF07650 KH domain DO83_RS10975 PF01926 50S ribosome-binding GTPase DO83_RS10980 PF11967 Recombination protein O N terminal DO83_RS10980 PF02565 Recombination protein O C terminal DO83_RS10990 PF03129 Anticodon binding domain DO83_RS10990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DO83_RS10995 PF02503 Polyphosphate kinase middle domain DO83_RS10995 PF17941 Polyphosphate kinase C-terminal domain 1 DO83_RS10995 PF13090 Polyphosphate kinase C-terminal domain 2 DO83_RS10995 PF13089 Polyphosphate kinase N-terminal domain DO83_RS11005 PF01979 Amidohydrolase family DO83_RS11020 PF12849 PBP superfamily domain DO83_RS11025 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS11030 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS11035 PF00005 ABC transporter DO83_RS11040 PF01895 PhoU domain DO83_RS11045 PF00486 Transcriptional regulatory protein, C terminal DO83_RS11045 PF00072 Response regulator receiver domain DO83_RS11050 PF00989 PAS fold DO83_RS11050 PF16736 Single Cache-like DO83_RS11050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS11050 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS11055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DO83_RS11055 PF05036 Sporulation related domain DO83_RS11055 PF08239 Bacterial SH3 domain DO83_RS11060 PF00497 Bacterial extracellular solute-binding proteins, family 3 DO83_RS11065 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS11070 PF00005 ABC transporter DO83_RS11075 PF00285 Citrate synthase, C-terminal domain DO83_RS11085 PF00149 Calcineurin-like phosphoesterase DO83_RS11115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DO83_RS11115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DO83_RS11120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS11125 PF03611 PTS system sugar-specific permease component DO83_RS11130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS11135 PF01261 Xylose isomerase-like TIM barrel DO83_RS11145 PF00596 Class II Aldolase and Adducin N-terminal domain DO83_RS11160 PF04198 Putative sugar-binding domain DO83_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS11175 PF00072 Response regulator receiver domain DO83_RS11175 PF01627 Hpt domain DO83_RS11175 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS11180 PF00072 Response regulator receiver domain DO83_RS11185 PF01566 Natural resistance-associated macrophage protein DO83_RS11190 PF02682 Carboxyltransferase domain, subdomain C and D DO83_RS11195 PF02626 Carboxyltransferase domain, subdomain A and B DO83_RS11200 PF00364 Biotin-requiring enzyme DO83_RS11205 PF02785 Biotin carboxylase C-terminal domain DO83_RS11205 PF00289 Biotin carboxylase, N-terminal domain DO83_RS11205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DO83_RS11210 PF03746 LamB/YcsF family DO83_RS11215 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DO83_RS11220 PF02441 Flavoprotein DO83_RS11225 PF00294 pfkB family carbohydrate kinase DO83_RS11235 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS11235 PF07724 AAA domain (Cdc48 subfamily) DO83_RS11235 PF02861 Clp amino terminal domain, pathogenicity island component DO83_RS11235 PF10431 C-terminal, D2-small domain, of ClpB protein DO83_RS11235 PF17871 AAA lid domain DO83_RS11245 PF00248 Aldo/keto reductase family DO83_RS11255 PF00654 Voltage gated chloride channel DO83_RS11260 PF03167 Uracil DNA glycosylase superfamily DO83_RS11270 PF00768 D-alanyl-D-alanine carboxypeptidase DO83_RS11270 PF07943 Penicillin-binding protein 5, C-terminal domain DO83_RS11275 PF00781 Diacylglycerol kinase catalytic domain DO83_RS11300 PF01170 Putative RNA methylase family UPF0020 DO83_RS11300 PF02926 THUMP domain DO83_RS11305 PF01725 Ham1 family DO83_RS11315 PF05958 tRNA (Uracil-5-)-methyltransferase DO83_RS11315 PF01938 TRAM domain DO83_RS11320 PF08534 Redoxin DO83_RS11325 PF12801 4Fe-4S binding domain DO83_RS11325 PF04205 FMN-binding domain DO83_RS11335 PF00005 ABC transporter DO83_RS11345 PF00072 Response regulator receiver domain DO83_RS11345 PF00486 Transcriptional regulatory protein, C terminal DO83_RS11350 PF00672 HAMP domain DO83_RS11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS11350 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS11370 PF12833 Helix-turn-helix domain DO83_RS11370 PF02311 AraC-like ligand binding domain DO83_RS11380 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DO83_RS11380 PF02837 Glycosyl hydrolases family 2, sugar binding domain DO83_RS11380 PF00703 Glycosyl hydrolases family 2 DO83_RS11385 PF02929 Beta galactosidase small chain DO83_RS11390 PF01797 Transposase IS200 like DO83_RS11395 PF01022 Bacterial regulatory protein, arsR family DO83_RS11400 PF03773 Predicted permease DO83_RS11410 PF01758 Sodium Bile acid symporter family DO83_RS11445 PF03448 MgtE intracellular N domain DO83_RS11445 PF01769 Divalent cation transporter DO83_RS11445 PF00571 CBS domain DO83_RS11450 PF01966 HD domain DO83_RS11455 PF01699 Sodium/calcium exchanger protein DO83_RS11460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DO83_RS11460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DO83_RS11465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DO83_RS11470 PF00155 Aminotransferase class I and II DO83_RS11470 PF00392 Bacterial regulatory proteins, gntR family DO83_RS11475 PF06689 ClpX C4-type zinc finger DO83_RS11475 PF07724 AAA domain (Cdc48 subfamily) DO83_RS11475 PF10431 C-terminal, D2-small domain, of ClpB protein DO83_RS11480 PF01063 Amino-transferase class IV DO83_RS11490 PF06874 Firmicute fructose-1,6-bisphosphatase DO83_RS11495 PF00082 Subtilase family DO83_RS11505 PF02082 Transcriptional regulator DO83_RS11510 PF00266 Aminotransferase class-V DO83_RS11515 PF01592 NifU-like N terminal domain DO83_RS11530 PF00072 Response regulator receiver domain DO83_RS11530 PF00486 Transcriptional regulatory protein, C terminal DO83_RS11540 PF00989 PAS fold DO83_RS11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS11540 PF00672 HAMP domain DO83_RS11540 PF18698 Histidine kinase sensor domain DO83_RS11540 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS11550 PF00117 Glutamine amidotransferase class-I DO83_RS11555 PF00977 Histidine biosynthesis protein DO83_RS11565 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DO83_RS11590 PF01544 CorA-like Mg2+ transporter protein DO83_RS11600 PF02887 Pyruvate kinase, alpha/beta domain DO83_RS11600 PF00224 Pyruvate kinase, barrel domain DO83_RS11600 PF00391 PEP-utilising enzyme, mobile domain DO83_RS11625 PF00830 Ribosomal L28 family DO83_RS11635 PF13684 Dihydroxyacetone kinase family DO83_RS11635 PF02734 DAK2 domain DO83_RS11640 PF17191 RecG wedge domain DO83_RS11640 PF00271 Helicase conserved C-terminal domain DO83_RS11640 PF00270 DEAD/DEAH box helicase DO83_RS11645 PF00708 Acylphosphatase DO83_RS11650 PF00269 Small, acid-soluble spore proteins, alpha/beta type DO83_RS11660 PF01467 Cytidylyltransferase-like DO83_RS11675 PF05636 HIGH Nucleotidyl Transferase DO83_RS11680 PF01515 Phosphate acetyl/butaryl transferase DO83_RS11685 PF00871 Acetokinase family DO83_RS11695 PF01783 Ribosomal L32p protein family DO83_RS11700 PF02504 Fatty acid synthesis protein DO83_RS11705 PF14622 Ribonuclease-III-like DO83_RS11705 PF00035 Double-stranded RNA binding motif DO83_RS11715 PF02881 SRP54-type protein, helical bundle domain DO83_RS11715 PF00448 SRP54-type protein, GTPase domain DO83_RS11720 PF00291 Pyridoxal-phosphate dependent enzyme DO83_RS11720 PF13291 ACT domain DO83_RS11725 PF00128 Alpha amylase, catalytic domain DO83_RS11725 PF02806 Alpha amylase, C-terminal all-beta domain DO83_RS11725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DO83_RS11730 PF00483 Nucleotidyl transferase DO83_RS11735 PF00483 Nucleotidyl transferase DO83_RS11740 PF00534 Glycosyl transferases group 1 DO83_RS11740 PF08323 Starch synthase catalytic domain DO83_RS11745 PF00343 Carbohydrate phosphorylase DO83_RS11750 PF02903 Alpha amylase, N-terminal ig-like domain DO83_RS11750 PF00128 Alpha amylase, catalytic domain DO83_RS11755 PF02690 Na+/Pi-cotransporter DO83_RS11760 PF04055 Radical SAM superfamily DO83_RS11760 PF01938 TRAM domain DO83_RS11760 PF00919 Uncharacterized protein family UPF0004 DO83_RS11765 PF05192 MutS domain III DO83_RS11765 PF05188 MutS domain II DO83_RS11765 PF01624 MutS domain I DO83_RS11765 PF00488 MutS domain V DO83_RS11765 PF05190 MutS family domain IV DO83_RS11770 PF08676 MutL C terminal dimerisation domain DO83_RS11770 PF01119 DNA mismatch repair protein, C-terminal domain DO83_RS11775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DO83_RS11785 PF06838 Methionine gamma-lyase DO83_RS11790 PF04002 RadC-like JAB domain DO83_RS11810 PF00905 Penicillin binding protein transpeptidase domain DO83_RS11810 PF03717 Penicillin-binding Protein dimerisation domain DO83_RS11815 PF03775 Septum formation inhibitor MinC, C-terminal domain DO83_RS11820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DO83_RS11825 PF03776 Septum formation topological specificity factor MinE DO83_RS11830 PF01098 Cell cycle protein DO83_RS11835 PF02142 MGS-like domain DO83_RS11840 PF00768 D-alanyl-D-alanine carboxypeptidase DO83_RS11840 PF07943 Penicillin-binding protein 5, C-terminal domain DO83_RS11845 PF04055 Radical SAM superfamily DO83_RS11845 PF16199 Radical_SAM C-terminal domain DO83_RS11855 PF01168 Alanine racemase, N-terminal domain DO83_RS11860 PF04472 Cell division protein SepF DO83_RS11865 PF17774 Putative RNA-binding domain in YlmH DO83_RS11865 PF01479 S4 domain DO83_RS11870 PF05103 DivIVA protein DO83_RS11875 PF01761 3-dehydroquinate synthase DO83_RS11880 PF01252 Signal peptidase (SPase) II DO83_RS11885 PF01479 S4 domain DO83_RS11885 PF00849 RNA pseudouridylate synthase DO83_RS11890 PF14748 Pyrroline-5-carboxylate reductase dimerisation DO83_RS11890 PF03807 NADP oxidoreductase coenzyme F420-dependent DO83_RS11895 PF00312 Ribosomal protein S15 DO83_RS11900 PF00575 S1 RNA binding domain DO83_RS11900 PF03725 3' exoribonuclease family, domain 2 DO83_RS11900 PF01138 3' exoribonuclease family, domain 1 DO83_RS11900 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DO83_RS11900 PF00013 KH domain DO83_RS11915 PF02545 Maf-like protein DO83_RS11920 PF02645 Uncharacterised protein, DegV family COG1307 DO83_RS11935 PF05922 Peptidase inhibitor I9 DO83_RS11935 PF13860 FlgD Ig-like domain DO83_RS11935 PF02225 PA domain DO83_RS11935 PF00082 Subtilase family DO83_RS11940 PF00343 Carbohydrate phosphorylase DO83_RS11950 PF16123 Hydroxyacylglutathione hydrolase C-terminus DO83_RS11950 PF00753 Metallo-beta-lactamase superfamily DO83_RS11960 PF03610 PTS system fructose IIA component DO83_RS11965 PF03830 PTS system sorbose subfamily IIB component DO83_RS11970 PF03609 PTS system sorbose-specific iic component DO83_RS11975 PF03613 PTS system mannose/fructose/sorbose family IID component DO83_RS11980 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS11980 PF00107 Zinc-binding dehydrogenase DO83_RS11985 PF01380 SIS domain DO83_RS11985 PF01418 Helix-turn-helix domain, rpiR family DO83_RS11990 PF00106 short chain dehydrogenase DO83_RS12000 PF16360 GTP-binding GTPase Middle Region DO83_RS12000 PF01926 50S ribosome-binding GTPase DO83_RS12000 PF13167 GTP-binding GTPase N-terminal DO83_RS12005 PF03123 CAT RNA binding domain DO83_RS12005 PF00874 PRD domain DO83_RS12010 PF00381 PTS HPr component phosphorylation site DO83_RS12015 PF05524 PEP-utilising enzyme, N-terminal DO83_RS12015 PF00391 PEP-utilising enzyme, mobile domain DO83_RS12015 PF02896 PEP-utilising enzyme, TIM barrel domain DO83_RS12035 PF05593 RHS Repeat DO83_RS12035 PF14220 Domain of unknown function (DUF4329) DO83_RS12035 PF03527 RHS protein DO83_RS12050 PF05593 RHS Repeat DO83_RS12050 PF03527 RHS protein DO83_RS12065 PF05593 RHS Repeat DO83_RS12065 PF03527 RHS protein DO83_RS12090 PF14220 Domain of unknown function (DUF4329) DO83_RS12090 PF03527 RHS protein DO83_RS12090 PF05593 RHS Repeat DO83_RS12135 PF01926 50S ribosome-binding GTPase DO83_RS12135 PF12631 MnmE helical domain DO83_RS12135 PF10396 GTP-binding protein TrmE N-terminus DO83_RS12140 PF00749 tRNA synthetases class I (E and Q), catalytic domain DO83_RS12145 PF13361 UvrD-like helicase C-terminal domain DO83_RS12145 PF00580 UvrD/REP helicase N-terminal domain DO83_RS12160 PF00999 Sodium/hydrogen exchanger family DO83_RS12175 PF02769 AIR synthase related protein, C-terminal domain DO83_RS12175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DO83_RS12175 PF00586 AIR synthase related protein, N-terminal domain DO83_RS12185 PF03471 Transporter associated domain DO83_RS12185 PF01595 Cyclin M transmembrane N-terminal domain DO83_RS12185 PF00571 CBS domain DO83_RS12190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DO83_RS12190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DO83_RS12195 PF02659 Putative manganese efflux pump DO83_RS12200 PF13597 Anaerobic ribonucleoside-triphosphate reductase DO83_RS12200 PF03477 ATP cone domain DO83_RS12210 PF07729 FCD domain DO83_RS12210 PF00392 Bacterial regulatory proteins, gntR family DO83_RS12215 PF17871 AAA lid domain DO83_RS12215 PF10431 C-terminal, D2-small domain, of ClpB protein DO83_RS12215 PF07724 AAA domain (Cdc48 subfamily) DO83_RS12215 PF02861 Clp amino terminal domain, pathogenicity island component DO83_RS12215 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS12225 PF18073 Rubredoxin metal binding domain DO83_RS12230 PF00749 tRNA synthetases class I (E and Q), catalytic domain DO83_RS12230 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DO83_RS12235 PF03830 PTS system sorbose subfamily IIB component DO83_RS12235 PF03610 PTS system fructose IIA component DO83_RS12240 PF03830 PTS system sorbose subfamily IIB component DO83_RS12245 PF00166 Chaperonin 10 Kd subunit DO83_RS12250 PF00118 TCP-1/cpn60 chaperonin family DO83_RS12255 PF01116 Fructose-bisphosphate aldolase class-II DO83_RS12260 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS12260 PF00107 Zinc-binding dehydrogenase DO83_RS12265 PF00465 Iron-containing alcohol dehydrogenase DO83_RS12270 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DO83_RS12270 PF00175 Oxidoreductase NAD-binding domain DO83_RS12275 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS12275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DO83_RS12275 PF13247 4Fe-4S dicluster domain DO83_RS12285 PF00571 CBS domain DO83_RS12285 PF00478 IMP dehydrogenase / GMP reductase domain DO83_RS12290 PF00873 AcrB/AcrD/AcrF family DO83_RS12305 PF01066 CDP-alcohol phosphatidyltransferase DO83_RS12310 PF02666 Phosphatidylserine decarboxylase DO83_RS12315 PF01235 Sodium:alanine symporter family DO83_RS12320 PF04552 Sigma-54, DNA binding domain DO83_RS12320 PF04963 Sigma-54 factor, core binding domain DO83_RS12320 PF00309 Sigma-54 factor, Activator interacting domain (AID) DO83_RS12330 PF03123 CAT RNA binding domain DO83_RS12330 PF00874 PRD domain DO83_RS12335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS12335 PF00367 phosphotransferase system, EIIB DO83_RS12335 PF02378 Phosphotransferase system, EIIC DO83_RS12340 PF00232 Glycosyl hydrolase family 1 DO83_RS12345 PF00391 PEP-utilising enzyme, mobile domain DO83_RS12345 PF02896 PEP-utilising enzyme, TIM barrel domain DO83_RS12345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DO83_RS12350 PF13419 Haloacid dehalogenase-like hydrolase DO83_RS12370 PF02535 ZIP Zinc transporter DO83_RS12380 PF00056 lactate/malate dehydrogenase, NAD binding domain DO83_RS12380 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DO83_RS12390 PF13091 PLD-like domain DO83_RS12410 PF00072 Response regulator receiver domain DO83_RS12410 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS12410 PF09308 LuxQ, periplasmic DO83_RS12410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS12415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DO83_RS12415 PF00056 lactate/malate dehydrogenase, NAD binding domain DO83_RS12425 PF01554 MatE DO83_RS12435 PF00440 Bacterial regulatory proteins, tetR family DO83_RS12455 PF18665 Tetracyclin repressor-like, C-terminal domain DO83_RS12455 PF00440 Bacterial regulatory proteins, tetR family DO83_RS12475 PF00072 Response regulator receiver domain DO83_RS12475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS12475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DO83_RS12475 PF01627 Hpt domain DO83_RS12475 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS12475 PF00672 HAMP domain DO83_RS12480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DO83_RS12480 PF00072 Response regulator receiver domain DO83_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS12480 PF00672 HAMP domain DO83_RS12480 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS12480 PF01627 Hpt domain DO83_RS12485 PF03466 LysR substrate binding domain DO83_RS12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS12500 PF00248 Aldo/keto reductase family DO83_RS12520 PF00872 Transposase, Mutator family DO83_RS12525 PF01979 Amidohydrolase family DO83_RS12530 PF03553 Na+/H+ antiporter family DO83_RS12535 PF00485 Phosphoribulokinase / Uridine kinase family DO83_RS12565 PF01451 Low molecular weight phosphotyrosine protein phosphatase DO83_RS12575 PF07499 RuvA, C-terminal domain DO83_RS12575 PF01330 RuvA N terminal domain DO83_RS12580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS12580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS12580 PF02378 Phosphotransferase system, EIIC DO83_RS12585 PF00392 Bacterial regulatory proteins, gntR family DO83_RS12590 PF02610 L-arabinose isomerase DO83_RS12590 PF11762 L-arabinose isomerase C-terminal domain DO83_RS12600 PF00596 Class II Aldolase and Adducin N-terminal domain DO83_RS12605 PF01263 Aldose 1-epimerase DO83_RS12610 PF12833 Helix-turn-helix domain DO83_RS12610 PF00072 Response regulator receiver domain DO83_RS12615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS12615 PF00672 HAMP domain DO83_RS12615 PF06580 Histidine kinase DO83_RS12615 PF02743 Cache domain DO83_RS12620 PF13407 Periplasmic binding protein domain DO83_RS12625 PF00005 ABC transporter DO83_RS12630 PF02653 Branched-chain amino acid transport system / permease component DO83_RS12635 PF02653 Branched-chain amino acid transport system / permease component DO83_RS12645 PF12833 Helix-turn-helix domain DO83_RS12655 PF16875 Glycosyl hydrolase family 36 N-terminal domain DO83_RS12655 PF16874 Glycosyl hydrolase family 36 C-terminal domain DO83_RS12665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DO83_RS12670 PF01797 Transposase IS200 like DO83_RS12675 PF00356 Bacterial regulatory proteins, lacI family DO83_RS12685 PF10509 Galactokinase galactose-binding signature DO83_RS12685 PF00288 GHMP kinases N terminal domain DO83_RS12685 PF08544 GHMP kinases C terminal DO83_RS12690 PF01263 Aldose 1-epimerase DO83_RS12695 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DO83_RS12695 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DO83_RS12700 PF16363 GDP-mannose 4,6 dehydratase DO83_RS12705 PF00664 ABC transporter transmembrane region DO83_RS12705 PF00005 ABC transporter DO83_RS12710 PF00664 ABC transporter transmembrane region DO83_RS12710 PF00005 ABC transporter DO83_RS12715 PF02417 Chromate transporter DO83_RS12720 PF02417 Chromate transporter DO83_RS12725 PF00270 DEAD/DEAH box helicase DO83_RS12725 PF16124 RecQ zinc-binding DO83_RS12725 PF09382 RQC domain DO83_RS12725 PF00271 Helicase conserved C-terminal domain DO83_RS12725 PF00570 HRDC domain DO83_RS12735 PF01386 Ribosomal L25p family DO83_RS12735 PF14693 Ribosomal protein TL5, C-terminal domain DO83_RS12745 PF02441 Flavoprotein DO83_RS12750 PF00733 Asparagine synthase DO83_RS12750 PF13537 Glutamine amidotransferase domain DO83_RS12765 PF00183 Hsp90 protein DO83_RS12770 PF02677 Epoxyqueuosine reductase QueH DO83_RS12775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DO83_RS12775 PF00117 Glutamine amidotransferase class-I DO83_RS12780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DO83_RS12780 PF02142 MGS-like domain DO83_RS12780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DO83_RS12785 PF00120 Glutamine synthetase, catalytic domain DO83_RS12785 PF03951 Glutamine synthetase, beta-Grasp domain DO83_RS12795 PF00155 Aminotransferase class I and II DO83_RS12805 PF01808 AICARFT/IMPCHase bienzyme DO83_RS12805 PF02142 MGS-like domain DO83_RS12810 PF01228 Glycine radical DO83_RS12810 PF02901 Pyruvate formate lyase-like DO83_RS12815 PF04055 Radical SAM superfamily DO83_RS12820 PF01797 Transposase IS200 like DO83_RS12850 PF01926 50S ribosome-binding GTPase DO83_RS12850 PF06071 Protein of unknown function (DUF933) DO83_RS12855 PF01790 Prolipoprotein diacylglyceryl transferase DO83_RS12860 PF02381 MraZ protein, putative antitoxin-like DO83_RS12865 PF01795 MraW methylase family DO83_RS12875 PF03717 Penicillin-binding Protein dimerisation domain DO83_RS12875 PF03793 PASTA domain DO83_RS12875 PF00905 Penicillin binding protein transpeptidase domain DO83_RS12880 PF00905 Penicillin binding protein transpeptidase domain DO83_RS12880 PF03717 Penicillin-binding Protein dimerisation domain DO83_RS12880 PF03793 PASTA domain DO83_RS12885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DO83_RS12885 PF00953 Glycosyl transferase family 4 DO83_RS12890 PF02875 Mur ligase family, glutamate ligase domain DO83_RS12890 PF08245 Mur ligase middle domain DO83_RS12895 PF01098 Cell cycle protein DO83_RS12905 PF12327 FtsZ family, C-terminal domain DO83_RS12905 PF00091 Tubulin/FtsZ family, GTPase domain DO83_RS12910 PF04055 Radical SAM superfamily DO83_RS12910 PF06968 Biotin and Thiamin Synthesis associated domain DO83_RS12915 PF03144 Elongation factor Tu domain 2 DO83_RS12915 PF00679 Elongation factor G C-terminus DO83_RS12915 PF00009 Elongation factor Tu GTP binding domain DO83_RS12925 PF12557 Cob(I)alamin adenosyltransferase N terminal DO83_RS12925 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DO83_RS12930 PF00701 Dihydrodipicolinate synthetase family DO83_RS12935 PF01113 Dihydrodipicolinate reductase, N-terminus DO83_RS12935 PF05173 Dihydrodipicolinate reductase, C-terminus DO83_RS12945 PF00465 Iron-containing alcohol dehydrogenase DO83_RS12975 PF01380 SIS domain DO83_RS12995 PF00501 AMP-binding enzyme DO83_RS12995 PF13193 AMP-binding enzyme C-terminal domain DO83_RS13060 PF00589 Phage integrase family DO83_RS13060 PF14659 Phage integrase, N-terminal SAM-like domain DO83_RS13070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DO83_RS13070 PF05698 Bacterial trigger factor protein (TF) C-terminus DO83_RS13070 PF05697 Bacterial trigger factor protein (TF) DO83_RS13075 PF00574 Clp protease DO83_RS13080 PF06689 ClpX C4-type zinc finger DO83_RS13080 PF10431 C-terminal, D2-small domain, of ClpB protein DO83_RS13080 PF07724 AAA domain (Cdc48 subfamily) DO83_RS13085 PF05362 Lon protease (S16) C-terminal proteolytic domain DO83_RS13085 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS13085 PF02190 ATP-dependent protease La (LON) substrate-binding domain DO83_RS13090 PF02875 Mur ligase family, glutamate ligase domain DO83_RS13090 PF08245 Mur ligase middle domain DO83_RS13095 PF01966 HD domain DO83_RS13100 PF00809 Pterin binding enzyme DO83_RS13105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DO83_RS13105 PF02152 Dihydroneopterin aldolase DO83_RS13110 PF01842 ACT domain DO83_RS13110 PF01817 Chorismate mutase type II DO83_RS13110 PF00800 Prephenate dehydratase DO83_RS13115 PF00884 Sulfatase DO83_RS13120 PF00709 Adenylosuccinate synthetase DO83_RS13125 PF10502 Signal peptidase, peptidase S26 DO83_RS13130 PF01042 Endoribonuclease L-PSP DO83_RS13135 PF00155 Aminotransferase class I and II DO83_RS13160 PF10458 Valyl tRNA synthetase tRNA binding arm DO83_RS13160 PF00133 tRNA synthetases class I (I, L, M and V) DO83_RS13160 PF08264 Anticodon-binding domain of tRNA DO83_RS13175 PF01330 RuvA N terminal domain DO83_RS13175 PF07499 RuvA, C-terminal domain DO83_RS13180 PF05496 Holliday junction DNA helicase RuvB P-loop domain DO83_RS13180 PF17864 RuvB AAA lid domain DO83_RS13180 PF05491 RuvB C-terminal winged helix domain DO83_RS13185 PF01136 Peptidase family U32 DO83_RS13185 PF16325 Peptidase family U32 C-terminal domain DO83_RS13190 PF01098 Cell cycle protein DO83_RS13195 PF00905 Penicillin binding protein transpeptidase domain DO83_RS13200 PF00293 NUDIX domain DO83_RS13205 PF00768 D-alanyl-D-alanine carboxypeptidase DO83_RS13205 PF07943 Penicillin-binding protein 5, C-terminal domain DO83_RS13210 PF00106 short chain dehydrogenase DO83_RS13215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS13215 PF05043 Mga helix-turn-helix domain DO83_RS13215 PF08279 HTH domain DO83_RS13215 PF00874 PRD domain DO83_RS13225 PF03608 PTS system enzyme II sorbitol-specific factor DO83_RS13230 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DO83_RS13230 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DO83_RS13235 PF03829 PTS system glucitol/sorbitol-specific IIA component DO83_RS13245 PF02616 Segregation and condensation protein ScpA DO83_RS13250 PF04079 Segregation and condensation complex subunit ScpB DO83_RS13255 PF00205 Thiamine pyrophosphate enzyme, central domain DO83_RS13255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DO83_RS13255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DO83_RS13260 PF10369 Small subunit of acetolactate synthase DO83_RS13265 PF00108 Thiolase, N-terminal domain DO83_RS13265 PF02803 Thiolase, C-terminal domain DO83_RS13270 PF00378 Enoyl-CoA hydratase/isomerase DO83_RS13275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DO83_RS13275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DO83_RS13280 PF02770 Acyl-CoA dehydrogenase, middle domain DO83_RS13280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DO83_RS13280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DO83_RS13285 PF01012 Electron transfer flavoprotein domain DO83_RS13290 PF00766 Electron transfer flavoprotein FAD-binding domain DO83_RS13290 PF01012 Electron transfer flavoprotein domain DO83_RS13300 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DO83_RS13300 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DO83_RS13315 PF07943 Penicillin-binding protein 5, C-terminal domain DO83_RS13315 PF00768 D-alanyl-D-alanine carboxypeptidase DO83_RS13320 PF03960 ArsC family DO83_RS13325 PF02127 Aminopeptidase I zinc metalloprotease (M18) DO83_RS13330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DO83_RS13335 PF03734 L,D-transpeptidase catalytic domain DO83_RS13340 PF08264 Anticodon-binding domain of tRNA DO83_RS13340 PF09334 tRNA synthetases class I (M) DO83_RS13340 PF00133 tRNA synthetases class I (I, L, M and V) DO83_RS13340 PF13603 Leucyl-tRNA synthetase, Domain 2 DO83_RS13350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DO83_RS13350 PF00056 lactate/malate dehydrogenase, NAD binding domain DO83_RS13370 PF02110 Hydroxyethylthiazole kinase family DO83_RS13375 PF02581 Thiamine monophosphate synthase DO83_RS13380 PF00953 Glycosyl transferase family 4 DO83_RS13385 PF00694 Aconitase C-terminal domain DO83_RS13385 PF00330 Aconitase family (aconitate hydratase) DO83_RS13390 PF03553 Na+/H+ antiporter family DO83_RS13395 PF07726 ATPase family associated with various cellular activities (AAA) DO83_RS13395 PF17863 AAA lid domain DO83_RS13410 PF00877 NlpC/P60 family DO83_RS13415 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DO83_RS13415 PF07055 Enoyl reductase FAD binding domain DO83_RS13415 PF12241 Trans-2-enoyl-CoA reductase catalytic region DO83_RS13420 PF10150 Ribonuclease E/G family DO83_RS13425 PF00829 Ribosomal prokaryotic L21 protein DO83_RS13435 PF01016 Ribosomal L27 protein DO83_RS13440 PF09269 Domain of unknown function (DUF1967) DO83_RS13440 PF01018 GTP1/OBG DO83_RS13440 PF01926 50S ribosome-binding GTPase DO83_RS13445 PF01985 CRS1 / YhbY (CRM) domain DO83_RS13450 PF01467 Cytidylyltransferase-like DO83_RS13455 PF01966 HD domain DO83_RS13465 PF01726 LexA DNA binding domain DO83_RS13465 PF00717 Peptidase S24-like DO83_RS13470 PF01476 LysM domain DO83_RS13475 PF05036 Sporulation related domain DO83_RS13475 PF01520 N-acetylmuramoyl-L-alanine amidase DO83_RS13480 PF01520 N-acetylmuramoyl-L-alanine amidase DO83_RS13495 PF00180 Isocitrate/isopropylmalate dehydrogenase DO83_RS13500 PF00920 Dehydratase family DO83_RS13505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DO83_RS13505 PF00205 Thiamine pyrophosphate enzyme, central domain DO83_RS13505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DO83_RS13510 PF00266 Aminotransferase class-V DO83_RS13515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DO83_RS13515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DO83_RS13520 PF02774 Semialdehyde dehydrogenase, dimerisation domain DO83_RS13520 PF01118 Semialdehyde dehydrogenase, NAD binding domain DO83_RS13525 PF05552 Conserved TM helix DO83_RS13525 PF00924 Mechanosensitive ion channel DO83_RS13540 PF01063 Amino-transferase class IV DO83_RS13545 PF04715 Anthranilate synthase component I, N terminal region DO83_RS13545 PF00425 chorismate binding enzyme DO83_RS13550 PF00117 Glutamine amidotransferase class-I DO83_RS13555 PF03527 RHS protein DO83_RS13555 PF05593 RHS Repeat DO83_RS13615 PF04452 RNA methyltransferase DO83_RS13620 PF00266 Aminotransferase class-V DO83_RS13625 PF02568 Thiamine biosynthesis protein (ThiI) DO83_RS13625 PF02926 THUMP domain DO83_RS13635 PF01938 TRAM domain DO83_RS13635 PF04055 Radical SAM superfamily DO83_RS13635 PF00919 Uncharacterized protein family UPF0004 DO83_RS13640 PF06135 IreB regulatory phosphoprotein DO83_RS13645 PF03652 Holliday junction resolvase DO83_RS13655 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DO83_RS13655 PF00753 Metallo-beta-lactamase superfamily DO83_RS13655 PF17770 Ribonuclease J C-terminal domain DO83_RS13665 PF01596 O-methyltransferase DO83_RS13670 PF01136 Peptidase family U32 DO83_RS13670 PF16325 Peptidase family U32 C-terminal domain DO83_RS13675 PF04542 Sigma-70 region 2 DO83_RS13675 PF04545 Sigma-70, region 4 DO83_RS13710 PF00082 Subtilase family DO83_RS13765 PF00072 Response regulator receiver domain DO83_RS13765 PF00486 Transcriptional regulatory protein, C terminal DO83_RS13770 PF00989 PAS fold DO83_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS13770 PF00512 His Kinase A (phospho-acceptor) domain DO83_RS13770 PF11808 Phosphate regulon sensor protein PhoR DO83_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS13785 PF03466 LysR substrate binding domain DO83_RS13790 PF01053 Cys/Met metabolism PLP-dependent enzyme DO83_RS13800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DO83_RS13800 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS13805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS13805 PF03466 LysR substrate binding domain DO83_RS13810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DO83_RS13810 PF08501 Shikimate dehydrogenase substrate binding domain DO83_RS13815 PF07690 Major Facilitator Superfamily DO83_RS13820 PF01487 Type I 3-dehydroquinase DO83_RS13830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DO83_RS13830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DO83_RS13835 PF03480 Bacterial extracellular solute-binding protein, family 7 DO83_RS13845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DO83_RS13845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DO83_RS13850 PF03466 LysR substrate binding domain DO83_RS13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS13855 PF01202 Shikimate kinase DO83_RS13860 PF00465 Iron-containing alcohol dehydrogenase DO83_RS13865 PF09285 Elongation factor P, C-terminal DO83_RS13865 PF01132 Elongation factor P (EF-P) OB domain DO83_RS13865 PF08207 Elongation factor P (EF-P) KOW-like domain DO83_RS13875 PF03372 Endonuclease/Exonuclease/phosphatase family DO83_RS13880 PF00132 Bacterial transferase hexapeptide (six repeats) DO83_RS13880 PF12804 MobA-like NTP transferase domain DO83_RS13880 PF14602 Hexapeptide repeat of succinyl-transferase DO83_RS13895 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS13900 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS13905 PF00005 ABC transporter DO83_RS13905 PF08402 TOBE domain DO83_RS13915 PF12838 4Fe-4S dicluster domain DO83_RS13920 PF01507 Phosphoadenosine phosphosulfate reductase family DO83_RS13925 PF00009 Elongation factor Tu GTP binding domain DO83_RS13935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DO83_RS13935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DO83_RS13935 PF02378 Phosphotransferase system, EIIC DO83_RS13940 PF08125 Mannitol dehydrogenase C-terminal domain DO83_RS13940 PF01232 Mannitol dehydrogenase Rossmann domain DO83_RS13945 PF02901 Pyruvate formate lyase-like DO83_RS13945 PF01228 Glycine radical DO83_RS13950 PF04055 Radical SAM superfamily DO83_RS13955 PF00202 Aminotransferase class-III DO83_RS13960 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS13965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DO83_RS13970 PF00005 ABC transporter DO83_RS13975 PF00465 Iron-containing alcohol dehydrogenase DO83_RS13990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DO83_RS13990 PF00925 GTP cyclohydrolase II DO83_RS13995 PF05670 NFACT protein RNA binding domain DO83_RS14005 PF13393 Histidyl-tRNA synthetase DO83_RS14010 PF01634 ATP phosphoribosyltransferase DO83_RS14015 PF00815 Histidinol dehydrogenase DO83_RS14020 PF00475 Imidazoleglycerol-phosphate dehydratase DO83_RS14025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DO83_RS14025 PF01502 Phosphoribosyl-AMP cyclohydrolase DO83_RS14030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DO83_RS14030 PF01411 tRNA synthetases class II (A) DO83_RS14030 PF02272 DHHA1 domain DO83_RS14035 PF01165 Ribosomal protein S21 DO83_RS14050 PF02562 PhoH-like protein DO83_RS14055 PF02130 Uncharacterized protein family UPF0054 DO83_RS14060 PF01943 Polysaccharide biosynthesis protein DO83_RS14060 PF14667 Polysaccharide biosynthesis C-terminal domain DO83_RS14080 PF01472 PUA domain DO83_RS14080 PF00696 Amino acid kinase family DO83_RS14085 PF05979 Bacterial protein of unknown function (DUF896) DO83_RS14090 PF00171 Aldehyde dehydrogenase family DO83_RS14095 PF13237 4Fe-4S dicluster domain DO83_RS14095 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DO83_RS14095 PF10531 SLBB domain DO83_RS14095 PF13375 RnfC Barrel sandwich hybrid domain DO83_RS14100 PF03116 NQR2, RnfD, RnfE family DO83_RS14105 PF04205 FMN-binding domain DO83_RS14110 PF02508 Rnf-Nqr subunit, membrane protein DO83_RS14115 PF02508 Rnf-Nqr subunit, membrane protein DO83_RS14120 PF04060 Putative Fe-S cluster DO83_RS14125 PF05239 PRC-barrel domain DO83_RS14130 PF03477 ATP cone domain DO83_RS14135 PF01078 Magnesium chelatase, subunit ChlI DO83_RS14135 PF13335 Magnesium chelatase, subunit ChlI C-terminal DO83_RS14140 PF02481 DNA recombination-mediator protein A DO83_RS14145 PF01131 DNA topoisomerase DO83_RS14145 PF01396 Topoisomerase DNA binding C4 zinc finger DO83_RS14145 PF01751 Toprim domain DO83_RS14150 PF08222 CodY helix-turn-helix domain DO83_RS14150 PF06018 CodY GAF-like domain DO83_RS14155 PF00318 Ribosomal protein S2 DO83_RS14160 PF00889 Elongation factor TS DO83_RS14165 PF13614 AAA domain DO83_RS14170 PF02195 ParB-like nuclease domain DO83_RS14170 PF17762 HTH domain found in ParB protein DO83_RS14200 PF00072 Response regulator receiver domain DO83_RS14215 PF03432 Relaxase/Mobilisation nuclease domain DO83_RS14270 PF04203 Sortase domain DO83_RS14405 PF00239 Resolvase, N terminal domain DO83_RS14405 PF02796 Helix-turn-helix domain of resolvase DO83_RS14415 PF00589 Phage integrase family DO83_RS14415 PF14659 Phage integrase, N-terminal SAM-like domain DO83_RS14435 PF00293 NUDIX domain DO83_RS14545 PF03358 NADPH-dependent FMN reductase DO83_RS14585 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DO83_RS14600 PF13361 UvrD-like helicase C-terminal domain DO83_RS14600 PF00580 UvrD/REP helicase N-terminal domain DO83_RS14610 PF00202 Aminotransferase class-III DO83_RS14620 PF00465 Iron-containing alcohol dehydrogenase DO83_RS14635 PF01012 Electron transfer flavoprotein domain DO83_RS14640 PF00766 Electron transfer flavoprotein FAD-binding domain DO83_RS14640 PF01012 Electron transfer flavoprotein domain DO83_RS14645 PF01565 FAD binding domain DO83_RS14645 PF02913 FAD linked oxidases, C-terminal domain DO83_RS14655 PF08543 Phosphomethylpyrimidine kinase DO83_RS14655 PF02581 Thiamine monophosphate synthase DO83_RS14675 PF14824 Sirohaem biosynthesis protein central DO83_RS14675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DO83_RS14675 PF10414 Sirohaem synthase dimerisation region DO83_RS14680 PF00490 Delta-aminolevulinic acid dehydratase DO83_RS14685 PF00202 Aminotransferase class-III DO83_RS14690 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DO83_RS14690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DO83_RS14690 PF01488 Shikimate / quinate 5-dehydrogenase DO83_RS14695 PF03900 Porphobilinogen deaminase, C-terminal domain DO83_RS14695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DO83_RS14700 PF01569 PAP2 superfamily DO83_RS14710 PF01554 MatE DO83_RS14715 PF02769 AIR synthase related protein, C-terminal domain DO83_RS14715 PF00586 AIR synthase related protein, N-terminal domain DO83_RS14720 PF06463 Molybdenum Cofactor Synthesis C DO83_RS14720 PF04055 Radical SAM superfamily DO83_RS14725 PF01967 MoaC family DO83_RS14730 PF00994 Probable molybdopterin binding domain DO83_RS14735 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS14740 PF08402 TOBE domain DO83_RS14740 PF00005 ABC transporter DO83_RS14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS14755 PF03459 TOBE domain DO83_RS14770 PF13478 XdhC Rossmann domain DO83_RS14770 PF02625 XdhC and CoxI family DO83_RS14775 PF02625 XdhC and CoxI family DO83_RS14775 PF13478 XdhC Rossmann domain DO83_RS14780 PF00155 Aminotransferase class I and II DO83_RS14795 PF07702 UTRA domain DO83_RS14795 PF00392 Bacterial regulatory proteins, gntR family DO83_RS14800 PF00005 ABC transporter DO83_RS14815 PF00375 Sodium:dicarboxylate symporter family DO83_RS14820 PF00579 tRNA synthetases class I (W and Y) DO83_RS14825 PF04397 LytTr DNA-binding domain DO83_RS14825 PF00072 Response regulator receiver domain DO83_RS14830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DO83_RS14830 PF17203 Single cache domain 3 DO83_RS14830 PF00989 PAS fold DO83_RS14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DO83_RS14840 PF00589 Phage integrase family DO83_RS14840 PF02920 DNA binding domain of tn916 integrase DO83_RS14845 PF09035 Excisionase from transposon Tn916 DO83_RS14875 PF14492 Elongation Factor G, domain II DO83_RS14875 PF00679 Elongation factor G C-terminus DO83_RS14875 PF00009 Elongation factor Tu GTP binding domain DO83_RS14875 PF03764 Elongation factor G, domain IV DO83_RS14890 PF00877 NlpC/P60 family DO83_RS14920 PF02486 Replication initiation factor DO83_RS14920 PF18106 Rolling Circle replication initiation protein N-terminal domain DO83_RS14940 PF06125 Bacterial protein of unknown function (DUF961) DO83_RS14950 PF00005 ABC transporter DO83_RS14950 PF13732 Domain of unknown function (DUF4162) DO83_RS14965 PF01717 Cobalamin-independent synthase, Catalytic domain DO83_RS14970 PF01416 tRNA pseudouridine synthase DO83_RS14975 PF00171 Aldehyde dehydrogenase family DO83_RS14985 PF00860 Permease family DO83_RS14995 PF12850 Calcineurin-like phosphoesterase superfamily domain DO83_RS15000 PF01751 Toprim domain DO83_RS15000 PF01131 DNA topoisomerase DO83_RS15010 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain DO83_RS15015 PF04298 Putative neutral zinc metallopeptidase DO83_RS15020 PF00075 RNase H DO83_RS15035 PF02590 Predicted SPOUT methyltransferase DO83_RS15040 PF03061 Thioesterase superfamily DO83_RS15045 PF01554 MatE DO83_RS15060 PF02590 Predicted SPOUT methyltransferase DO83_RS15070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DO83_RS15070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DO83_RS15075 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DO83_RS15075 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DO83_RS15080 PF04607 Region found in RelA / SpoT proteins DO83_RS15080 PF13291 ACT domain DO83_RS15080 PF02824 TGS domain DO83_RS15085 PF00753 Metallo-beta-lactamase superfamily DO83_RS15090 PF04055 Radical SAM superfamily DO83_RS15100 PF03129 Anticodon binding domain DO83_RS15100 PF13393 Histidyl-tRNA synthetase DO83_RS15110 PF01336 OB-fold nucleic acid binding domain DO83_RS15110 PF00152 tRNA synthetases class II (D, K and N) DO83_RS15110 PF02938 GAD domain DO83_RS15115 PF00696 Amino acid kinase family DO83_RS15115 PF01842 ACT domain DO83_RS15115 PF13840 ACT domain DO83_RS15120 PF00464 Serine hydroxymethyltransferase DO83_RS15135 PF12833 Helix-turn-helix domain DO83_RS15135 PF02311 AraC-like ligand binding domain DO83_RS15145 PF01751 Toprim domain DO83_RS15145 PF01131 DNA topoisomerase DO83_RS15170 PF09546 Stage III sporulation protein AE (spore_III_AE) DO83_RS15190 PF00872 Transposase, Mutator family DO83_RS15225 PF01867 CRISPR associated protein Cas1 DO83_RS15230 PF09827 CRISPR associated protein Cas2 DO83_RS15285 PF12102 Domain of unknown function (DUF3578) DO83_RS15285 PF07728 AAA domain (dynein-related subfamily) DO83_RS15310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DO83_RS15310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DO83_RS15315 PF00892 EamA-like transporter family DO83_RS15340 PF01327 Polypeptide deformylase DO83_RS15400 PF11799 impB/mucB/samB family C-terminal domain DO83_RS15400 PF00817 impB/mucB/samB family DO83_RS15400 PF11798 IMS family HHH motif DO83_RS15410 PF02901 Pyruvate formate lyase-like DO83_RS15410 PF01228 Glycine radical DO83_RS15415 PF04055 Radical SAM superfamily DO83_RS15420 PF00378 Enoyl-CoA hydratase/isomerase DO83_RS15425 PF01144 Coenzyme A transferase DO83_RS15430 PF01144 Coenzyme A transferase DO83_RS15435 PF00860 Permease family DO83_RS15440 PF01869 BadF/BadG/BcrA/BcrD ATPase family DO83_RS15445 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DO83_RS15455 PF12323 Helix-turn-helix domain DO83_RS15455 PF01385 Probable transposase DO83_RS15455 PF07282 Putative transposase DNA-binding domain DO83_RS15460 PF08402 TOBE domain DO83_RS15460 PF00005 ABC transporter DO83_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component DO83_RS15480 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DO83_RS15490 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DO83_RS15490 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DO83_RS15495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DO83_RS15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS15500 PF03466 LysR substrate binding domain DO83_RS15505 PF08240 Alcohol dehydrogenase GroES-like domain DO83_RS15505 PF00107 Zinc-binding dehydrogenase DO83_RS15515 PF00588 SpoU rRNA Methylase family DO83_RS15520 PF03466 LysR substrate binding domain DO83_RS15520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DO83_RS15525 PF03816 Cell envelope-related transcriptional attenuator domain DO83_RS15550 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DO83_RS15560 PF02190 ATP-dependent protease La (LON) substrate-binding domain DO83_RS15560 PF05362 Lon protease (S16) C-terminal proteolytic domain DO83_RS15560 PF00004 ATPase family associated with various cellular activities (AAA) DO83_RS15565 PF17910 FeoB cytosolic helical domain DO83_RS15565 PF07664 Ferrous iron transport protein B C terminus DO83_RS15565 PF04023 FeoA domain DO83_RS15565 PF02421 Ferrous iron transport protein B DO83_RS15565 PF07670 Nucleoside recognition DO83_RS15570 PF00403 Heavy-metal-associated domain DO83_RS15575 PF02583 Metal-sensitive transcriptional repressor DO83_RS15590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DO83_RS15590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DO83_RS15590 PF02824 TGS domain DO83_RS15590 PF03129 Anticodon binding domain DO83_RS15600 PF00958 GMP synthase C terminal domain DO83_RS15600 PF00117 Glutamine amidotransferase class-I DO83_RS15600 PF03352 Methyladenine glycosylase DO83_RS15600 PF13673 Acetyltransferase (GNAT) domain DO83_RS15600 PF13302 Acetyltransferase (GNAT) domain DO83_RS15605 PF00149 Calcineurin-like phosphoesterase DO83_RS15620 PF00795 Carbon-nitrogen hydrolase DO83_RS15625 PF01566 Natural resistance-associated macrophage protein DO83_RS15630 PF02899 Phage integrase, N-terminal SAM-like domain DO83_RS15630 PF00589 Phage integrase family DO83_RS15680 PF01925 Sulfite exporter TauE/SafE DO83_RS15685 PF00557 Metallopeptidase family M24 DO83_RS15685 PF02810 SEC-C motif