locus-tag class description CPRO_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CPRO_RS00005 PF11638 DnaA N-terminal domain CPRO_RS00005 PF00308 Bacterial dnaA protein CPRO_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain CPRO_RS00015 PF02767 DNA polymerase III beta subunit, central domain CPRO_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain CPRO_RS00025 PF02463 RecF/RecN/SMC N terminal domain CPRO_RS00030 PF01751 Toprim domain CPRO_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus CPRO_RS00030 PF00204 DNA gyrase B CPRO_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A CPRO_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller CPRO_RS00060 PF00781 Diacylglycerol kinase catalytic domain CPRO_RS00065 PF13614 AAA domain CPRO_RS00070 PF02195 ParB-like nuclease domain CPRO_RS00070 PF17762 HTH domain found in ParB protein CPRO_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain CPRO_RS00095 PF00893 Small Multidrug Resistance protein CPRO_RS00105 PF00294 pfkB family carbohydrate kinase CPRO_RS00115 PF12116 Stage III sporulation protein D CPRO_RS00125 PF01880 Desulfoferrodoxin CPRO_RS00125 PF06397 Desulfoferrodoxin, N-terminal domain CPRO_RS00130 PF00753 Metallo-beta-lactamase superfamily CPRO_RS00130 PF00258 Flavodoxin CPRO_RS00135 PF02915 Rubrerythrin CPRO_RS00140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_RS00140 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPRO_RS00140 PF02142 MGS-like domain CPRO_RS00145 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPRO_RS00145 PF00117 Glutamine amidotransferase class-I CPRO_RS00150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPRO_RS00150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPRO_RS00155 PF00202 Aminotransferase class-III CPRO_RS00160 PF00696 Amino acid kinase family CPRO_RS00165 PF01960 ArgJ family CPRO_RS00170 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPRO_RS00175 PF00248 Aldo/keto reductase family CPRO_RS00180 PF01070 FMN-dependent dehydrogenase CPRO_RS00190 PF01336 OB-fold nucleic acid binding domain CPRO_RS00190 PF00152 tRNA synthetases class II (D, K and N) CPRO_RS00195 PF01625 Peptide methionine sulfoxide reductase CPRO_RS00195 PF01641 SelR domain CPRO_RS00200 PF00795 Carbon-nitrogen hydrolase CPRO_RS00205 PF00209 Sodium:neurotransmitter symporter family CPRO_RS00210 PF03313 Serine dehydratase alpha chain CPRO_RS00215 PF01235 Sodium:alanine symporter family CPRO_RS00235 PF00571 CBS domain CPRO_RS00235 PF00478 IMP dehydrogenase / GMP reductase domain CPRO_RS00255 PF00690 Cation transporter/ATPase, N-terminus CPRO_RS00255 PF00689 Cation transporting ATPase, C-terminus CPRO_RS00260 PF16921 Tex protein YqgF-like domain CPRO_RS00260 PF17674 HHH domain CPRO_RS00260 PF09371 Tex-like protein N-terminal domain CPRO_RS00260 PF00575 S1 RNA binding domain CPRO_RS00270 PF01381 Helix-turn-helix CPRO_RS00285 PF01250 Ribosomal protein S6 CPRO_RS00290 PF00436 Single-strand binding protein family CPRO_RS00295 PF01084 Ribosomal protein S18 CPRO_RS00300 PF12822 ECF transporter, substrate-specific component CPRO_RS00305 PF07478 D-ala D-ala ligase C-terminus CPRO_RS00305 PF01820 D-ala D-ala ligase N-terminus CPRO_RS00310 PF01177 Asp/Glu/Hydantoin racemase CPRO_RS00320 PF00085 Thioredoxin CPRO_RS00325 PF02652 L-lactate permease CPRO_RS00330 PF00056 lactate/malate dehydrogenase, NAD binding domain CPRO_RS00330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPRO_RS00340 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS00340 PF17862 AAA+ lid domain CPRO_RS00340 PF01434 Peptidase family M41 CPRO_RS00345 PF18277 AbrB C-terminal domain CPRO_RS00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPRO_RS00355 PF07670 Nucleoside recognition CPRO_RS00365 PF14437 MafB19-like deaminase CPRO_RS00380 PF12169 DNA polymerase III subunits gamma and tau domain III CPRO_RS00385 PF02575 YbaB/EbfC DNA-binding family CPRO_RS00390 PF13662 Toprim domain CPRO_RS00390 PF02132 RecR protein CPRO_RS00405 PF03070 TENA/THI-4/PQQC family CPRO_RS00410 PF00005 ABC transporter CPRO_RS00415 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS00420 PF09084 NMT1/THI5 like CPRO_RS00450 PF03323 Bacillus/Clostridium GerA spore germination protein CPRO_RS00465 PF09551 Stage II sporulation protein R (spore_II_R) CPRO_RS00475 PF02142 MGS-like domain CPRO_RS00480 PF01098 Cell cycle protein CPRO_RS00485 PF03776 Septum formation topological specificity factor MinE CPRO_RS00490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_RS00495 PF03775 Septum formation inhibitor MinC, C-terminal domain CPRO_RS00500 PF03717 Penicillin-binding Protein dimerisation domain CPRO_RS00500 PF00905 Penicillin binding protein transpeptidase domain CPRO_RS00510 PF04085 rod shape-determining protein MreC CPRO_RS00525 PF13187 4Fe-4S dicluster domain CPRO_RS00525 PF00037 4Fe-4S binding domain CPRO_RS00525 PF04060 Putative Fe-S cluster CPRO_RS00530 PF02508 Rnf-Nqr subunit, membrane protein CPRO_RS00535 PF02508 Rnf-Nqr subunit, membrane protein CPRO_RS00545 PF03116 NQR2, RnfD, RnfE family CPRO_RS00550 PF13237 4Fe-4S dicluster domain CPRO_RS00550 PF13375 RnfC Barrel sandwich hybrid domain CPRO_RS00550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CPRO_RS00550 PF10531 SLBB domain CPRO_RS00555 PF04963 Sigma-54 factor, core binding domain CPRO_RS00555 PF04552 Sigma-54, DNA binding domain CPRO_RS00555 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPRO_RS00560 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS00560 PF00155 Aminotransferase class I and II CPRO_RS00570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_RS00570 PF01411 tRNA synthetases class II (A) CPRO_RS00570 PF02272 DHHA1 domain CPRO_RS00580 PF05525 Branched-chain amino acid transport protein CPRO_RS00595 PF00082 Subtilase family CPRO_RS00610 PF02110 Hydroxyethylthiazole kinase family CPRO_RS00615 PF02581 Thiamine monophosphate synthase CPRO_RS00620 PF07729 FCD domain CPRO_RS00620 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS00625 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_RS00635 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPRO_RS00640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPRO_RS00640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPRO_RS00645 PF00082 Subtilase family CPRO_RS00665 PF00149 Calcineurin-like phosphoesterase CPRO_RS00670 PF01966 HD domain CPRO_RS00670 PF13286 Phosphohydrolase-associated domain CPRO_RS00680 PF08275 DNA primase catalytic core, N-terminal domain CPRO_RS00680 PF10410 DnaB-helicase binding domain of primase CPRO_RS00680 PF01807 CHC2 zinc finger CPRO_RS00685 PF03979 Sigma-70 factor, region 1.1 CPRO_RS00685 PF00140 Sigma-70 factor, region 1.2 CPRO_RS00685 PF04542 Sigma-70 region 2 CPRO_RS00685 PF04545 Sigma-70, region 4 CPRO_RS00685 PF04539 Sigma-70 region 3 CPRO_RS00690 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CPRO_RS00695 PF01784 NIF3 (NGG1p interacting factor 3) CPRO_RS00700 PF03129 Anticodon binding domain CPRO_RS00700 PF02824 TGS domain CPRO_RS00700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_RS00700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_RS00720 PF00589 Phage integrase family CPRO_RS00775 PF13495 Phage integrase, N-terminal SAM-like domain CPRO_RS00775 PF00589 Phage integrase family CPRO_RS00790 PF00484 Carbonic anhydrase CPRO_RS00810 PF01594 AI-2E family transporter CPRO_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS00815 PF13492 GAF domain CPRO_RS00815 PF06580 Histidine kinase CPRO_RS00815 PF07694 5TMR of 5TMR-LYT CPRO_RS00820 PF04397 LytTr DNA-binding domain CPRO_RS00820 PF00072 Response regulator receiver domain CPRO_RS00825 PF02554 Carbon starvation protein CstA CPRO_RS00830 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPRO_RS00835 PF10672 S-adenosylmethionine-dependent methyltransferase CPRO_RS00835 PF17785 PUA-like domain CPRO_RS00840 PF01048 Phosphorylase superfamily CPRO_RS00845 PF03553 Na+/H+ antiporter family CPRO_RS00860 PF01261 Xylose isomerase-like TIM barrel CPRO_RS00865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPRO_RS00865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPRO_RS00870 PF12822 ECF transporter, substrate-specific component CPRO_RS00880 PF08402 TOBE domain CPRO_RS00880 PF00005 ABC transporter CPRO_RS00885 PF01458 Uncharacterized protein family (UPF0051) CPRO_RS00890 PF10502 Signal peptidase, peptidase S26 CPRO_RS00915 PF00005 ABC transporter CPRO_RS00915 PF16326 ABC transporter C-terminal domain CPRO_RS00915 PF12848 ABC transporter CPRO_RS00920 PF06971 Putative DNA-binding protein N-terminus CPRO_RS00920 PF02629 CoA binding domain CPRO_RS00930 PF01554 MatE CPRO_RS00935 PF00376 MerR family regulatory protein CPRO_RS00935 PF09278 MerR, DNA binding CPRO_RS00940 PF00005 ABC transporter CPRO_RS00945 PF00005 ABC transporter CPRO_RS00945 PF12399 Branched-chain amino acid ATP-binding cassette transporter CPRO_RS00950 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS00950 PF11862 Domain of unknown function (DUF3382) CPRO_RS00955 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS00970 PF00303 Thymidylate synthase CPRO_RS00975 PF00186 Dihydrofolate reductase CPRO_RS00980 PF01743 Poly A polymerase head domain CPRO_RS00980 PF13735 tRNA nucleotidyltransferase domain 2 putative CPRO_RS00980 PF12627 Probable RNA and SrmB- binding site of polymerase A CPRO_RS01000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPRO_RS01000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPRO_RS01000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPRO_RS01000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPRO_RS01005 PF00474 Sodium:solute symporter family CPRO_RS01010 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS01010 PF08361 MAATS-type transcriptional repressor, C-terminal region CPRO_RS01040 PF01925 Sulfite exporter TauE/SafE CPRO_RS01045 PF01925 Sulfite exporter TauE/SafE CPRO_RS01055 PF02446 4-alpha-glucanotransferase CPRO_RS01060 PF00733 Asparagine synthase CPRO_RS01060 PF13537 Glutamine amidotransferase domain CPRO_RS01075 PF00465 Iron-containing alcohol dehydrogenase CPRO_RS01080 PF06071 Protein of unknown function (DUF933) CPRO_RS01080 PF01926 50S ribosome-binding GTPase CPRO_RS01105 PF08486 Stage II sporulation protein CPRO_RS01115 PF01661 Macro domain CPRO_RS01120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPRO_RS01120 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CPRO_RS01125 PF00265 Thymidine kinase CPRO_RS01135 PF02386 Cation transport protein CPRO_RS01140 PF02080 TrkA-C domain CPRO_RS01140 PF02254 TrkA-N domain CPRO_RS01145 PF01043 SecA preprotein cross-linking domain CPRO_RS01145 PF07517 SecA DEAD-like domain CPRO_RS01145 PF02810 SEC-C motif CPRO_RS01145 PF07516 SecA Wing and Scaffold domain CPRO_RS01155 PF03462 PCRF domain CPRO_RS01155 PF00472 RF-1 domain CPRO_RS01160 PF01479 S4 domain CPRO_RS01160 PF00849 RNA pseudouridylate synthase CPRO_RS01165 PF00483 Nucleotidyl transferase CPRO_RS01175 PF04452 RNA methyltransferase CPRO_RS01180 PF00266 Aminotransferase class-V CPRO_RS01185 PF02926 THUMP domain CPRO_RS01185 PF02568 Thiamine biosynthesis protein (ThiI) CPRO_RS01200 PF01476 LysM domain CPRO_RS01200 PF06725 3D domain CPRO_RS01205 PF01026 TatD related DNase CPRO_RS01210 PF01588 Putative tRNA binding domain CPRO_RS01210 PF08264 Anticodon-binding domain of tRNA CPRO_RS01210 PF09334 tRNA synthetases class I (M) CPRO_RS01215 PF02073 Thermophilic metalloprotease (M29) CPRO_RS01230 PF09285 Elongation factor P, C-terminal CPRO_RS01230 PF01132 Elongation factor P (EF-P) OB domain CPRO_RS01230 PF08207 Elongation factor P (EF-P) KOW-like domain CPRO_RS01240 PF02203 Tar ligand binding domain homologue CPRO_RS01240 PF00672 HAMP domain CPRO_RS01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS01245 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS01255 PF00916 Sulfate permease family CPRO_RS01255 PF01740 STAS domain CPRO_RS01260 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS01265 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS01270 PF00005 ABC transporter CPRO_RS01275 PF02608 ABC transporter substrate-binding protein PnrA-like CPRO_RS01295 PF01554 MatE CPRO_RS01300 PF04748 Divergent polysaccharide deacetylase CPRO_RS01305 PF03838 Recombination protein U CPRO_RS01310 PF01523 Putative modulator of DNA gyrase CPRO_RS01315 PF01523 Putative modulator of DNA gyrase CPRO_RS01320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPRO_RS01320 PF00753 Metallo-beta-lactamase superfamily CPRO_RS01320 PF10996 Beta-Casp domain CPRO_RS01325 PF00128 Alpha amylase, catalytic domain CPRO_RS01325 PF02806 Alpha amylase, C-terminal all-beta domain CPRO_RS01325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPRO_RS01330 PF01165 Ribosomal protein S21 CPRO_RS01335 PF09424 Yqey-like protein CPRO_RS01350 PF00005 ABC transporter CPRO_RS01355 PF07873 YabP family CPRO_RS01365 PF02562 PhoH-like protein CPRO_RS01370 PF07698 7TM receptor with intracellular HD hydrolase CPRO_RS01370 PF01966 HD domain CPRO_RS01370 PF07697 7TM-HD extracellular CPRO_RS01375 PF02130 Uncharacterized protein family UPF0054 CPRO_RS01380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPRO_RS01385 PF03167 Uracil DNA glycosylase superfamily CPRO_RS01395 PF07650 KH domain CPRO_RS01395 PF01926 50S ribosome-binding GTPase CPRO_RS01400 PF11967 Recombination protein O N terminal CPRO_RS01400 PF02565 Recombination protein O C terminal CPRO_RS01405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_RS01405 PF03129 Anticodon binding domain CPRO_RS01410 PF00302 Chloramphenicol acetyltransferase CPRO_RS01415 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CPRO_RS01415 PF02896 PEP-utilising enzyme, TIM barrel domain CPRO_RS01415 PF00391 PEP-utilising enzyme, mobile domain CPRO_RS01425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_RS01425 PF00460 Flagella basal body rod protein CPRO_RS01430 PF02049 Flagellar hook-basal body complex protein FliE CPRO_RS01440 PF01706 FliG C-terminal domain CPRO_RS01440 PF14841 FliG middle domain CPRO_RS01440 PF14842 FliG N-terminal domain CPRO_RS01450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_RS01450 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPRO_RS01450 PF18269 T3SS EscN ATPase C-terminal domain CPRO_RS01470 PF16868 NMT1-like family CPRO_RS01485 PF13411 MerR HTH family regulatory protein CPRO_RS01485 PF07739 TipAS antibiotic-recognition domain CPRO_RS01510 PF00689 Cation transporting ATPase, C-terminus CPRO_RS01510 PF00690 Cation transporter/ATPase, N-terminus CPRO_RS01515 PF00155 Aminotransferase class I and II CPRO_RS01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS01530 PF00588 SpoU rRNA Methylase family CPRO_RS01535 PF01475 Ferric uptake regulator family CPRO_RS01550 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS01550 PF00072 Response regulator receiver domain CPRO_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS01555 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS01565 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPRO_RS01565 PF03477 ATP cone domain CPRO_RS01575 PF03477 ATP cone domain CPRO_RS01590 PF13361 UvrD-like helicase C-terminal domain CPRO_RS01590 PF00580 UvrD/REP helicase N-terminal domain CPRO_RS01590 PF12705 PD-(D/E)XK nuclease superfamily CPRO_RS01605 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS01605 PF18665 Tetracyclin repressor-like, C-terminal domain CPRO_RS01625 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPRO_RS01630 PF00814 Glycoprotease family CPRO_RS01635 PF00583 Acetyltransferase (GNAT) family CPRO_RS01640 PF13654 AAA domain CPRO_RS01640 PF05362 Lon protease (S16) C-terminal proteolytic domain CPRO_RS01650 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_RS01650 PF04122 Putative cell wall binding repeat 2 CPRO_RS01660 PF03725 3' exoribonuclease family, domain 2 CPRO_RS01660 PF01138 3' exoribonuclease family, domain 1 CPRO_RS01665 PF01725 Ham1 family CPRO_RS01715 PF01255 Putative undecaprenyl diphosphate synthase CPRO_RS01720 PF08439 Oligopeptidase F CPRO_RS01720 PF01432 Peptidase family M3 CPRO_RS01725 PF08323 Starch synthase catalytic domain CPRO_RS01725 PF00534 Glycosyl transferases group 1 CPRO_RS01775 PF01184 GPR1/FUN34/yaaH family CPRO_RS01785 PF01381 Helix-turn-helix CPRO_RS01790 PF00302 Chloramphenicol acetyltransferase CPRO_RS01795 PF01022 Bacterial regulatory protein, arsR family CPRO_RS01805 PF02833 DHHA2 domain CPRO_RS01805 PF00571 CBS domain CPRO_RS01805 PF01368 DHH family CPRO_RS01805 PF07085 DRTGG domain CPRO_RS01810 PF01416 tRNA pseudouridine synthase CPRO_RS01830 PF01380 SIS domain CPRO_RS01850 PF00005 ABC transporter CPRO_RS01860 PF07664 Ferrous iron transport protein B C terminus CPRO_RS01860 PF17910 FeoB cytosolic helical domain CPRO_RS01860 PF02421 Ferrous iron transport protein B CPRO_RS01860 PF07670 Nucleoside recognition CPRO_RS01860 PF04023 FeoA domain CPRO_RS01865 PF07883 Cupin domain CPRO_RS01865 PF01381 Helix-turn-helix CPRO_RS01875 PF00188 Cysteine-rich secretory protein family CPRO_RS01895 PF04055 Radical SAM superfamily CPRO_RS01905 PF05697 Bacterial trigger factor protein (TF) CPRO_RS01905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPRO_RS01905 PF05698 Bacterial trigger factor protein (TF) C-terminus CPRO_RS01910 PF00574 Clp protease CPRO_RS01915 PF10431 C-terminal, D2-small domain, of ClpB protein CPRO_RS01915 PF07724 AAA domain (Cdc48 subfamily) CPRO_RS01915 PF06689 ClpX C4-type zinc finger CPRO_RS01925 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS01925 PF13291 ACT domain CPRO_RS01930 PF00892 EamA-like transporter family CPRO_RS01940 PF17854 FtsK alpha domain CPRO_RS01940 PF01580 FtsK/SpoIIIE family CPRO_RS01940 PF09397 Ftsk gamma domain CPRO_RS01945 PF01268 Formate--tetrahydrofolate ligase CPRO_RS01950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPRO_RS01950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPRO_RS01955 PF18693 TRAM domain CPRO_RS01955 PF04055 Radical SAM superfamily CPRO_RS01955 PF00919 Uncharacterized protein family UPF0004 CPRO_RS01960 PF01066 CDP-alcohol phosphatidyltransferase CPRO_RS01970 PF18146 Damage-inducible protein CinA KH domain CPRO_RS01970 PF00994 Probable molybdopterin binding domain CPRO_RS01970 PF02464 Competence-damaged protein CPRO_RS01980 PF00154 recA bacterial DNA recombination protein CPRO_RS01985 PF02631 RecX family CPRO_RS01995 PF00829 Ribosomal prokaryotic L21 protein CPRO_RS02000 PF04327 Cysteine protease Prp CPRO_RS02005 PF01016 Ribosomal L27 protein CPRO_RS02010 PF09269 Domain of unknown function (DUF1967) CPRO_RS02010 PF01926 50S ribosome-binding GTPase CPRO_RS02010 PF01018 GTP1/OBG CPRO_RS02015 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS02015 PF17152 Periplasmic sensor domain CPRO_RS02025 PF05193 Peptidase M16 inactive domain CPRO_RS02025 PF00675 Insulinase (Peptidase family M16) CPRO_RS02030 PF01790 Prolipoprotein diacylglyceryl transferase CPRO_RS02035 PF12848 ABC transporter CPRO_RS02035 PF00005 ABC transporter CPRO_RS02035 PF16326 ABC transporter C-terminal domain CPRO_RS02040 PF03471 Transporter associated domain CPRO_RS02040 PF01595 Cyclin M transmembrane N-terminal domain CPRO_RS02040 PF00571 CBS domain CPRO_RS02045 PF00704 Glycosyl hydrolases family 18 CPRO_RS02045 PF01476 LysM domain CPRO_RS02055 PF00072 Response regulator receiver domain CPRO_RS02055 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS02060 PF00672 HAMP domain CPRO_RS02060 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS02080 PF07549 SecD/SecF GG Motif CPRO_RS02080 PF02355 Protein export membrane protein CPRO_RS02085 PF07549 SecD/SecF GG Motif CPRO_RS02085 PF02355 Protein export membrane protein CPRO_RS02090 PF01171 PP-loop family CPRO_RS02095 PF00589 Phage integrase family CPRO_RS02095 PF13495 Phage integrase, N-terminal SAM-like domain CPRO_RS02105 PF01926 50S ribosome-binding GTPase CPRO_RS02110 PF10502 Signal peptidase, peptidase S26 CPRO_RS02120 PF01245 Ribosomal protein L19 CPRO_RS02145 PF00156 Phosphoribosyl transferase domain CPRO_RS02150 PF17768 RecJ OB domain CPRO_RS02150 PF02272 DHHA1 domain CPRO_RS02150 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CPRO_RS02150 PF01368 DHH family CPRO_RS02155 PF00933 Glycosyl hydrolase family 3 N terminal domain CPRO_RS02160 PF13291 ACT domain CPRO_RS02160 PF04607 Region found in RelA / SpoT proteins CPRO_RS02160 PF02824 TGS domain CPRO_RS02165 PF02580 D-Tyr-tRNA(Tyr) deacylase CPRO_RS02170 PF04055 Radical SAM superfamily CPRO_RS02175 PF13393 Histidyl-tRNA synthetase CPRO_RS02175 PF03129 Anticodon binding domain CPRO_RS02180 PF02080 TrkA-C domain CPRO_RS02180 PF02254 TrkA-N domain CPRO_RS02185 PF02386 Cation transport protein CPRO_RS02195 PF00009 Elongation factor Tu GTP binding domain CPRO_RS02195 PF06421 GTP-binding protein LepA C-terminus CPRO_RS02195 PF03144 Elongation factor Tu domain 2 CPRO_RS02195 PF00679 Elongation factor G C-terminus CPRO_RS02200 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_RS02200 PF00072 Response regulator receiver domain CPRO_RS02205 PF00398 Ribosomal RNA adenine dimethylase CPRO_RS02230 PF01965 DJ-1/PfpI family CPRO_RS02250 PF02390 Putative methyltransferase CPRO_RS02260 PF04055 Radical SAM superfamily CPRO_RS02260 PF16199 Radical_SAM C-terminal domain CPRO_RS02270 PF00155 Aminotransferase class I and II CPRO_RS02280 PF01842 ACT domain CPRO_RS02285 PF08544 GHMP kinases C terminal CPRO_RS02285 PF00288 GHMP kinases N terminal domain CPRO_RS02290 PF00696 Amino acid kinase family CPRO_RS02290 PF13840 ACT domain CPRO_RS02290 PF01842 ACT domain CPRO_RS02295 PF05067 Manganese containing catalase CPRO_RS02315 PF00857 Isochorismatase family CPRO_RS02335 PF02632 BioY family CPRO_RS02345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPRO_RS02345 PF02770 Acyl-CoA dehydrogenase, middle domain CPRO_RS02345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPRO_RS02350 PF01012 Electron transfer flavoprotein domain CPRO_RS02355 PF00766 Electron transfer flavoprotein FAD-binding domain CPRO_RS02355 PF01012 Electron transfer flavoprotein domain CPRO_RS02360 PF04607 Region found in RelA / SpoT proteins CPRO_RS02375 PF00773 RNB domain CPRO_RS02375 PF17876 Cold shock domain CPRO_RS02375 PF00575 S1 RNA binding domain CPRO_RS02375 PF08206 Ribonuclease B OB domain CPRO_RS02385 PF13520 Amino acid permease CPRO_RS02390 PF02001 Protein of unknown function DUF134 CPRO_RS02395 PF10609 NUBPL iron-transfer P-loop NTPase CPRO_RS02400 PF01235 Sodium:alanine symporter family CPRO_RS02405 PF01235 Sodium:alanine symporter family CPRO_RS02410 PF01235 Sodium:alanine symporter family CPRO_RS02420 PF00534 Glycosyl transferases group 1 CPRO_RS02420 PF13439 Glycosyltransferase Family 4 CPRO_RS02425 PF13361 UvrD-like helicase C-terminal domain CPRO_RS02425 PF00580 UvrD/REP helicase N-terminal domain CPRO_RS02435 PF00005 ABC transporter CPRO_RS02460 PF04294 VanW like protein CPRO_RS02470 PF00155 Aminotransferase class I and II CPRO_RS02475 PF01595 Cyclin M transmembrane N-terminal domain CPRO_RS02475 PF00571 CBS domain CPRO_RS02475 PF03471 Transporter associated domain CPRO_RS02480 PF02146 Sir2 family CPRO_RS02495 PF03551 Transcriptional regulator PadR-like family CPRO_RS02535 PF07670 Nucleoside recognition CPRO_RS02535 PF07664 Ferrous iron transport protein B C terminus CPRO_RS02535 PF02421 Ferrous iron transport protein B CPRO_RS02535 PF04023 FeoA domain CPRO_RS02535 PF17910 FeoB cytosolic helical domain CPRO_RS02545 PF00672 HAMP domain CPRO_RS02545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS02545 PF02203 Tar ligand binding domain homologue CPRO_RS02550 PF00258 Flavodoxin CPRO_RS02570 PF04607 Region found in RelA / SpoT proteins CPRO_RS02585 PF01613 Flavin reductase like domain CPRO_RS02590 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CPRO_RS02590 PF17126 RsmF rRNA methyltransferase first C-terminal domain CPRO_RS02590 PF01189 16S rRNA methyltransferase RsmB/F CPRO_RS02595 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS02595 PF14821 Threonine synthase N terminus CPRO_RS02600 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPRO_RS02605 PF00456 Transketolase, thiamine diphosphate binding domain CPRO_RS02605 PF02779 Transketolase, pyrimidine binding domain CPRO_RS02605 PF02780 Transketolase, C-terminal domain CPRO_RS02620 PF05167 Uncharacterised ACR (DUF711) CPRO_RS02630 PF00338 Ribosomal protein S10p/S20e CPRO_RS02635 PF00297 Ribosomal protein L3 CPRO_RS02640 PF00573 Ribosomal protein L4/L1 family CPRO_RS02645 PF00276 Ribosomal protein L23 CPRO_RS02650 PF03947 Ribosomal Proteins L2, C-terminal domain CPRO_RS02650 PF00181 Ribosomal Proteins L2, RNA binding domain CPRO_RS02655 PF00203 Ribosomal protein S19 CPRO_RS02660 PF00237 Ribosomal protein L22p/L17e CPRO_RS02665 PF07650 KH domain CPRO_RS02665 PF00189 Ribosomal protein S3, C-terminal domain CPRO_RS02670 PF00252 Ribosomal protein L16p/L10e CPRO_RS02675 PF00831 Ribosomal L29 protein CPRO_RS02680 PF00366 Ribosomal protein S17 CPRO_RS02685 PF00238 Ribosomal protein L14p/L23e CPRO_RS02690 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPRO_RS02690 PF00467 KOW motif CPRO_RS02695 PF00673 ribosomal L5P family C-terminus CPRO_RS02695 PF00281 Ribosomal protein L5 CPRO_RS02700 PF00253 Ribosomal protein S14p/S29e CPRO_RS02705 PF00410 Ribosomal protein S8 CPRO_RS02710 PF00347 Ribosomal protein L6 CPRO_RS02715 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPRO_RS02720 PF00333 Ribosomal protein S5, N-terminal domain CPRO_RS02720 PF03719 Ribosomal protein S5, C-terminal domain CPRO_RS02725 PF00327 Ribosomal protein L30p/L7e CPRO_RS02730 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPRO_RS02735 PF00344 SecY translocase CPRO_RS02740 PF05191 Adenylate kinase, active site lid CPRO_RS02745 PF00557 Metallopeptidase family M24 CPRO_RS02755 PF01176 Translation initiation factor 1A / IF-1 CPRO_RS02760 PF00444 Ribosomal protein L36 CPRO_RS02765 PF00416 Ribosomal protein S13/S18 CPRO_RS02770 PF00411 Ribosomal protein S11 CPRO_RS02780 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPRO_RS02780 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPRO_RS02780 PF01000 RNA polymerase Rpb3/RpoA insert domain CPRO_RS02785 PF01196 Ribosomal protein L17 CPRO_RS02800 PF00005 ABC transporter CPRO_RS02805 PF00005 ABC transporter CPRO_RS02810 PF02361 Cobalt transport protein CPRO_RS02815 PF01416 tRNA pseudouridine synthase CPRO_RS02820 PF00572 Ribosomal protein L13 CPRO_RS02825 PF00380 Ribosomal protein S9/S16 CPRO_RS02830 PF05684 Protein of unknown function (DUF819) CPRO_RS02835 PF01244 Membrane dipeptidase (Peptidase family M19) CPRO_RS02845 PF01985 CRS1 / YhbY (CRM) domain CPRO_RS02855 PF01467 Cytidylyltransferase-like CPRO_RS02865 PF01645 Conserved region in glutamate synthase CPRO_RS02865 PF01493 GXGXG motif CPRO_RS02865 PF04898 Glutamate synthase central domain CPRO_RS02865 PF00310 Glutamine amidotransferases class-II CPRO_RS02870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPRO_RS02870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS02875 PF00672 HAMP domain CPRO_RS02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS02875 PF02203 Tar ligand binding domain homologue CPRO_RS02885 PF00753 Metallo-beta-lactamase superfamily CPRO_RS02900 PF05958 tRNA (Uracil-5-)-methyltransferase CPRO_RS02905 PF00575 S1 RNA binding domain CPRO_RS02915 PF00005 ABC transporter CPRO_RS02915 PF09383 NIL domain CPRO_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS02925 PF03180 NLPA lipoprotein CPRO_RS02930 PF01546 Peptidase family M20/M25/M40 CPRO_RS02930 PF07687 Peptidase dimerisation domain CPRO_RS02935 PF01554 MatE CPRO_RS02945 PF01116 Fructose-bisphosphate aldolase class-II CPRO_RS02950 PF01252 Signal peptidase (SPase) II CPRO_RS02960 PF01042 Endoribonuclease L-PSP CPRO_RS02965 PF16658 Class II release factor RF3, C-terminal domain CPRO_RS02965 PF03144 Elongation factor Tu domain 2 CPRO_RS02965 PF00009 Elongation factor Tu GTP binding domain CPRO_RS02970 PF08281 Sigma-70, region 4 CPRO_RS02970 PF04542 Sigma-70 region 2 CPRO_RS02980 PF13393 Histidyl-tRNA synthetase CPRO_RS02985 PF01634 ATP phosphoribosyltransferase CPRO_RS02990 PF00815 Histidinol dehydrogenase CPRO_RS02995 PF00155 Aminotransferase class I and II CPRO_RS03000 PF00475 Imidazoleglycerol-phosphate dehydratase CPRO_RS03005 PF00117 Glutamine amidotransferase class-I CPRO_RS03015 PF00977 Histidine biosynthesis protein CPRO_RS03020 PF00977 Histidine biosynthesis protein CPRO_RS03025 PF01502 Phosphoribosyl-AMP cyclohydrolase CPRO_RS03025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CPRO_RS03035 PF00255 Glutathione peroxidase CPRO_RS03040 PF01047 MarR family CPRO_RS03075 PF08378 Nuclease-related domain CPRO_RS03115 PF02386 Cation transport protein CPRO_RS03125 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS03125 PF02702 Osmosensitive K+ channel His kinase sensor domain CPRO_RS03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS03125 PF13493 Domain of unknown function (DUF4118) CPRO_RS03130 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS03130 PF00072 Response regulator receiver domain CPRO_RS03160 PF07833 Copper amine oxidase N-terminal domain CPRO_RS03170 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_RS03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS03175 PF03466 LysR substrate binding domain CPRO_RS03195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPRO_RS03195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPRO_RS03200 PF00550 Phosphopantetheine attachment site CPRO_RS03205 PF03060 Nitronate monooxygenase CPRO_RS03210 PF00698 Acyl transferase domain CPRO_RS03220 PF00109 Beta-ketoacyl synthase, N-terminal domain CPRO_RS03220 PF02801 Beta-ketoacyl synthase, C-terminal domain CPRO_RS03225 PF00364 Biotin-requiring enzyme CPRO_RS03230 PF07977 FabA-like domain CPRO_RS03235 PF00289 Biotin carboxylase, N-terminal domain CPRO_RS03235 PF02785 Biotin carboxylase C-terminal domain CPRO_RS03235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_RS03240 PF17848 Acetyl-coA carboxylase zinc finger domain CPRO_RS03240 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPRO_RS03260 PF03418 Germination protease CPRO_RS03265 PF01649 Ribosomal protein S20 CPRO_RS03275 PF02885 Glycosyl transferase family, helical bundle domain CPRO_RS03275 PF00591 Glycosyl transferase family, a/b domain CPRO_RS03275 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CPRO_RS03280 PF01676 Metalloenzyme superfamily CPRO_RS03290 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CPRO_RS03290 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CPRO_RS03290 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CPRO_RS03295 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_RS03295 PF08264 Anticodon-binding domain of tRNA CPRO_RS03305 PF02683 Cytochrome C biogenesis protein transmembrane region CPRO_RS03320 PF13411 MerR HTH family regulatory protein CPRO_RS03320 PF06445 GyrI-like small molecule binding domain CPRO_RS03325 PF02515 CoA-transferase family III CPRO_RS03330 PF03061 Thioesterase superfamily CPRO_RS03340 PF00730 HhH-GPD superfamily base excision DNA repair protein CPRO_RS03340 PF00633 Helix-hairpin-helix motif CPRO_RS03360 PF04073 Aminoacyl-tRNA editing domain CPRO_RS03365 PF13180 PDZ domain CPRO_RS03375 PF07670 Nucleoside recognition CPRO_RS03375 PF07664 Ferrous iron transport protein B C terminus CPRO_RS03375 PF17910 FeoB cytosolic helical domain CPRO_RS03375 PF02421 Ferrous iron transport protein B CPRO_RS03385 PF00480 ROK family CPRO_RS03395 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CPRO_RS03395 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CPRO_RS03400 PF14437 MafB19-like deaminase CPRO_RS03405 PF01327 Polypeptide deformylase CPRO_RS03410 PF01330 RuvA N terminal domain CPRO_RS03410 PF07499 RuvA, C-terminal domain CPRO_RS03415 PF17864 RuvB AAA lid domain CPRO_RS03415 PF05491 RuvB C-terminal winged helix domain CPRO_RS03415 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPRO_RS03430 PF02915 Rubrerythrin CPRO_RS03435 PF03749 Sugar fermentation stimulation protein RE domain CPRO_RS03435 PF17746 SfsA N-terminal OB domain CPRO_RS03440 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_RS03440 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_RS03445 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS03445 PF17156 Gammaproteobacterial periplasmic sensor domain CPRO_RS03450 PF01810 LysE type translocator CPRO_RS03455 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPRO_RS03470 PF00999 Sodium/hydrogen exchanger family CPRO_RS03475 PF17757 UvrB interaction domain CPRO_RS03475 PF04851 Type III restriction enzyme, res subunit CPRO_RS03475 PF02151 UvrB/uvrC motif CPRO_RS03475 PF00271 Helicase conserved C-terminal domain CPRO_RS03475 PF12344 Ultra-violet resistance protein B CPRO_RS03500 PF01113 Dihydrodipicolinate reductase, N-terminus CPRO_RS03500 PF05173 Dihydrodipicolinate reductase, C-terminus CPRO_RS03505 PF00701 Dihydrodipicolinate synthetase family CPRO_RS03510 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPRO_RS03510 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPRO_RS03525 PF13649 Methyltransferase domain CPRO_RS03530 PF01430 Hsp33 protein CPRO_RS03545 PF01496 V-type ATPase 116kDa subunit family CPRO_RS03550 PF00137 ATP synthase subunit C CPRO_RS03555 PF01991 ATP synthase (E/31 kDa) subunit CPRO_RS03565 PF01990 ATP synthase (F/14-kDa) subunit CPRO_RS03570 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPRO_RS03570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_RS03570 PF16886 ATPsynthase alpha/beta subunit N-term extension CPRO_RS03575 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPRO_RS03575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_RS03580 PF01813 ATP synthase subunit D CPRO_RS03585 PF00155 Aminotransferase class I and II CPRO_RS03595 PF00561 alpha/beta hydrolase fold CPRO_RS03595 PF08386 TAP-like protein CPRO_RS03600 PF03590 Aspartate-ammonia ligase CPRO_RS03615 PF04122 Putative cell wall binding repeat 2 CPRO_RS03615 PF08486 Stage II sporulation protein CPRO_RS03620 PF00205 Thiamine pyrophosphate enzyme, central domain CPRO_RS03620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPRO_RS03620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_RS03625 PF10369 Small subunit of acetolactate synthase CPRO_RS03630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CPRO_RS03630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPRO_RS03640 PF02938 GAD domain CPRO_RS03640 PF01336 OB-fold nucleic acid binding domain CPRO_RS03640 PF00152 tRNA synthetases class II (D, K and N) CPRO_RS03650 PF18644 Phage integrase SAM-like domain CPRO_RS03650 PF00589 Phage integrase family CPRO_RS03710 PF01612 3'-5' exonuclease CPRO_RS03710 PF00476 DNA polymerase family A CPRO_RS03710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPRO_RS03710 PF01367 5'-3' exonuclease, C-terminal SAM fold CPRO_RS03740 PF04539 Sigma-70 region 3 CPRO_RS03740 PF04545 Sigma-70, region 4 CPRO_RS03740 PF04542 Sigma-70 region 2 CPRO_RS03745 PF00313 'Cold-shock' DNA-binding domain CPRO_RS03760 PF03592 Terminase small subunit CPRO_RS03905 PF00149 Calcineurin-like phosphoesterase CPRO_RS03905 PF02872 5'-nucleotidase, C-terminal domain CPRO_RS03910 PF00149 Calcineurin-like phosphoesterase CPRO_RS03910 PF02872 5'-nucleotidase, C-terminal domain CPRO_RS03915 PF00892 EamA-like transporter family CPRO_RS03935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_RS03945 PF03576 Peptidase family S58 CPRO_RS03950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_RS03960 PF05949 Bacterial protein of unknown function (DUF881) CPRO_RS03965 PF06947 Protein of unknown function (DUF1290) CPRO_RS03970 PF00091 Tubulin/FtsZ family, GTPase domain CPRO_RS03970 PF12327 FtsZ family, C-terminal domain CPRO_RS03975 PF12849 PBP superfamily domain CPRO_RS03980 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS03985 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS03990 PF00005 ABC transporter CPRO_RS03995 PF01895 PhoU domain CPRO_RS04005 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS04005 PF00072 Response regulator receiver domain CPRO_RS04010 PF16736 Single Cache-like CPRO_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS04010 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS04010 PF00989 PAS fold CPRO_RS04025 PF02445 Quinolinate synthetase A protein CPRO_RS04030 PF00890 FAD binding domain CPRO_RS04035 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPRO_RS04035 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CPRO_RS04045 PF00120 Glutamine synthetase, catalytic domain CPRO_RS04045 PF12437 Glutamine synthetase type III N terminal CPRO_RS04045 PF18318 Glutamine synthetase C-terminal domain CPRO_RS04075 PF05164 Cell division protein ZapA CPRO_RS04080 PF01136 Peptidase family U32 CPRO_RS04080 PF16325 Peptidase family U32 C-terminal domain CPRO_RS04085 PF01098 Cell cycle protein CPRO_RS04090 PF00905 Penicillin binding protein transpeptidase domain CPRO_RS04095 PF01869 BadF/BadG/BcrA/BcrD ATPase family CPRO_RS04100 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CPRO_RS04105 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CPRO_RS04110 PF01144 Coenzyme A transferase CPRO_RS04115 PF00072 Response regulator receiver domain CPRO_RS04120 PF01627 Hpt domain CPRO_RS04120 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS04120 PF00072 Response regulator receiver domain CPRO_RS04120 PF00672 HAMP domain CPRO_RS04120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPRO_RS04120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS04130 PF04304 Protein of unknown function (DUF454) CPRO_RS04135 PF00664 ABC transporter transmembrane region CPRO_RS04135 PF00005 ABC transporter CPRO_RS04195 PF01476 LysM domain CPRO_RS04195 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CPRO_RS04210 PF10934 Protein of unknown function (DUF2634) CPRO_RS04215 PF04865 Baseplate J-like protein CPRO_RS04255 PF02574 Homocysteine S-methyltransferase CPRO_RS04295 PF00708 Acylphosphatase CPRO_RS04295 PF17788 HypF Kae1-like domain CPRO_RS04295 PF01300 Telomere recombination CPRO_RS04295 PF07503 HypF finger CPRO_RS04300 PF01455 HupF/HypC family CPRO_RS04305 PF01924 Hydrogenase formation hypA family CPRO_RS04310 PF00586 AIR synthase related protein, N-terminal domain CPRO_RS04310 PF02769 AIR synthase related protein, C-terminal domain CPRO_RS04320 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CPRO_RS04320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CPRO_RS04325 PF00374 Nickel-dependent hydrogenase CPRO_RS04330 PF18324 Hypothetical protein TT1725 CPRO_RS04330 PF00180 Isocitrate/isopropylmalate dehydrogenase CPRO_RS04335 PF00330 Aconitase family (aconitate hydratase) CPRO_RS04340 PF00682 HMGL-like CPRO_RS04350 PF00476 DNA polymerase family A CPRO_RS04350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPRO_RS04350 PF01367 5'-3' exonuclease, C-terminal SAM fold CPRO_RS04355 PF01121 Dephospho-CoA kinase CPRO_RS04365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPRO_RS04370 PF01230 HIT domain CPRO_RS04375 PF00239 Resolvase, N terminal domain CPRO_RS04435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPRO_RS04445 PF11799 impB/mucB/samB family C-terminal domain CPRO_RS04445 PF00817 impB/mucB/samB family CPRO_RS04455 PF00293 NUDIX domain CPRO_RS04470 PF04002 RadC-like JAB domain CPRO_RS04480 PF00579 tRNA synthetases class I (W and Y) CPRO_RS04485 PF13180 PDZ domain CPRO_RS04505 PF13537 Glutamine amidotransferase domain CPRO_RS04505 PF00733 Asparagine synthase CPRO_RS04510 PF00120 Glutamine synthetase, catalytic domain CPRO_RS04510 PF12437 Glutamine synthetase type III N terminal CPRO_RS04510 PF18318 Glutamine synthetase C-terminal domain CPRO_RS04520 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS04530 PF02548 Ketopantoate hydroxymethyltransferase CPRO_RS04535 PF02569 Pantoate-beta-alanine ligase CPRO_RS04550 PF00672 HAMP domain CPRO_RS04550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS04550 PF17200 Single Cache domain 2 CPRO_RS04575 PF03471 Transporter associated domain CPRO_RS04575 PF00999 Sodium/hydrogen exchanger family CPRO_RS04575 PF02080 TrkA-C domain CPRO_RS04580 PF00180 Isocitrate/isopropylmalate dehydrogenase CPRO_RS04585 PF00694 Aconitase C-terminal domain CPRO_RS04590 PF00330 Aconitase family (aconitate hydratase) CPRO_RS04595 PF00682 HMGL-like CPRO_RS04595 PF08502 LeuA allosteric (dimerisation) domain CPRO_RS04600 PF07702 UTRA domain CPRO_RS04600 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS04605 PF00920 Dehydratase family CPRO_RS04610 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_RS04620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPRO_RS04620 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPRO_RS04630 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_RS04630 PF01471 Putative peptidoglycan binding domain CPRO_RS04635 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS04635 PF09308 LuxQ, periplasmic CPRO_RS04635 PF00072 Response regulator receiver domain CPRO_RS04665 PF04055 Radical SAM superfamily CPRO_RS04670 PF03099 Biotin/lipoate A/B protein ligase family CPRO_RS04670 PF10437 Bacterial lipoate protein ligase C-terminus CPRO_RS04675 PF00158 Sigma-54 interaction domain CPRO_RS04675 PF02954 Bacterial regulatory protein, Fis family CPRO_RS04675 PF13426 PAS domain CPRO_RS04680 PF03313 Serine dehydratase alpha chain CPRO_RS04690 PF00521 DNA gyrase/topoisomerase IV, subunit A CPRO_RS04690 PF03989 DNA gyrase C-terminal domain, beta-propeller CPRO_RS04695 PF00986 DNA gyrase B subunit, carboxyl terminus CPRO_RS04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS04695 PF00204 DNA gyrase B CPRO_RS04695 PF01751 Toprim domain CPRO_RS04710 PF13302 Acetyltransferase (GNAT) domain CPRO_RS04710 PF00958 GMP synthase C terminal domain CPRO_RS04710 PF03352 Methyladenine glycosylase CPRO_RS04710 PF13673 Acetyltransferase (GNAT) domain CPRO_RS04710 PF00117 Glutamine amidotransferase class-I CPRO_RS04720 PF01081 KDPG and KHG aldolase CPRO_RS04730 PF03786 D-mannonate dehydratase (UxuA) CPRO_RS04735 PF01232 Mannitol dehydrogenase Rossmann domain CPRO_RS04735 PF08125 Mannitol dehydrogenase C-terminal domain CPRO_RS04740 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_RS04745 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPRO_RS04750 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPRO_RS04755 PF08240 Alcohol dehydrogenase GroES-like domain CPRO_RS04755 PF00107 Zinc-binding dehydrogenase CPRO_RS04760 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS04760 PF07729 FCD domain CPRO_RS04770 PF01565 FAD binding domain CPRO_RS04770 PF08031 Berberine and berberine like CPRO_RS04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS04775 PF00072 Response regulator receiver domain CPRO_RS04775 PF09456 RcsC Alpha-Beta-Loop (ABL) CPRO_RS04775 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS04780 PF00072 Response regulator receiver domain CPRO_RS04780 PF00196 Bacterial regulatory proteins, luxR family CPRO_RS04810 PF01418 Helix-turn-helix domain, rpiR family CPRO_RS04810 PF01380 SIS domain CPRO_RS04815 PF00294 pfkB family carbohydrate kinase CPRO_RS04825 PF00005 ABC transporter CPRO_RS04830 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS04835 PF00480 ROK family CPRO_RS04840 PF01116 Fructose-bisphosphate aldolase class-II CPRO_RS04845 PF00365 Phosphofructokinase CPRO_RS04850 PF08013 Tagatose 6 phosphate kinase CPRO_RS04855 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS04855 PF17932 Tetracyclin repressor-like, C-terminal domain CPRO_RS04860 PF00005 ABC transporter CPRO_RS04885 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS04905 PF02810 SEC-C motif CPRO_RS04905 PF00557 Metallopeptidase family M24 CPRO_RS04920 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS04920 PF07694 5TMR of 5TMR-LYT CPRO_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS04930 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS04935 PF00005 ABC transporter CPRO_RS04940 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_RS04945 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS04950 PF04072 Leucine carboxyl methyltransferase CPRO_RS04955 PF02664 S-Ribosylhomocysteinase (LuxS) CPRO_RS04960 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_RS04965 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS04970 PF03466 LysR substrate binding domain CPRO_RS04975 PF03180 NLPA lipoprotein CPRO_RS04980 PF09383 NIL domain CPRO_RS04980 PF00005 ABC transporter CPRO_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS05000 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_RS05000 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPRO_RS05005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_RS05010 PF00501 AMP-binding enzyme CPRO_RS05010 PF14535 AMP-binding enzyme C-terminal domain CPRO_RS05015 PF00155 Aminotransferase class I and II CPRO_RS05020 PF02082 Transcriptional regulator CPRO_RS05025 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS05040 PF00899 ThiF family CPRO_RS05045 PF00266 Aminotransferase class-V CPRO_RS05050 PF01171 PP-loop family CPRO_RS05055 PF00742 Homoserine dehydrogenase CPRO_RS05055 PF03447 Homoserine dehydrogenase, NAD binding domain CPRO_RS05055 PF01842 ACT domain CPRO_RS05065 PF04545 Sigma-70, region 4 CPRO_RS05065 PF04542 Sigma-70 region 2 CPRO_RS05080 PF13426 PAS domain CPRO_RS05080 PF00158 Sigma-54 interaction domain CPRO_RS05080 PF02954 Bacterial regulatory protein, Fis family CPRO_RS05085 PF00676 Dehydrogenase E1 component CPRO_RS05090 PF02779 Transketolase, pyrimidine binding domain CPRO_RS05090 PF02780 Transketolase, C-terminal domain CPRO_RS05095 PF02817 e3 binding domain CPRO_RS05095 PF00364 Biotin-requiring enzyme CPRO_RS05095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPRO_RS05100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_RS05100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS05105 PF00672 HAMP domain CPRO_RS05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS05105 PF02743 Cache domain CPRO_RS05115 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS05120 PF00005 ABC transporter CPRO_RS05120 PF08402 TOBE domain CPRO_RS05125 PF02082 Transcriptional regulator CPRO_RS05130 PF04073 Aminoacyl-tRNA editing domain CPRO_RS05135 PF13193 AMP-binding enzyme C-terminal domain CPRO_RS05135 PF00668 Condensation domain CPRO_RS05135 PF00501 AMP-binding enzyme CPRO_RS05135 PF00550 Phosphopantetheine attachment site CPRO_RS05150 PF03062 MBOAT, membrane-bound O-acyltransferase family CPRO_RS05160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPRO_RS05160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPRO_RS05165 PF00733 Asparagine synthase CPRO_RS05165 PF13537 Glutamine amidotransferase domain CPRO_RS05175 PF03466 LysR substrate binding domain CPRO_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS05180 PF00171 Aldehyde dehydrogenase family CPRO_RS05180 PF00465 Iron-containing alcohol dehydrogenase CPRO_RS05185 PF00271 Helicase conserved C-terminal domain CPRO_RS05185 PF00270 DEAD/DEAH box helicase CPRO_RS05190 PF02673 Bacitracin resistance protein BacA CPRO_RS05195 PF02308 MgtC family CPRO_RS05200 PF12164 Stage V sporulation protein AA CPRO_RS05205 PF13782 Stage V sporulation protein AB CPRO_RS05210 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPRO_RS05220 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CPRO_RS05225 PF01709 Transcriptional regulator CPRO_RS05230 PF14659 Phage integrase, N-terminal SAM-like domain CPRO_RS05230 PF00589 Phage integrase family CPRO_RS05305 PF00589 Phage integrase family CPRO_RS05310 PF03592 Terminase small subunit CPRO_RS05310 PF10668 Phage terminase small subunit CPRO_RS05425 PF15975 Flotillin CPRO_RS05425 PF01145 SPFH domain / Band 7 family CPRO_RS05430 PF04892 VanZ like family CPRO_RS05450 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS05450 PF00072 Response regulator receiver domain CPRO_RS05455 PF00672 HAMP domain CPRO_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS05455 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS05460 PF02687 FtsX-like permease family CPRO_RS05460 PF00005 ABC transporter CPRO_RS05460 PF12704 MacB-like periplasmic core domain CPRO_RS05475 PF01795 MraW methylase family CPRO_RS05495 PF13538 UvrD-like helicase C-terminal domain CPRO_RS05500 PF12833 Helix-turn-helix domain CPRO_RS05525 PF12697 Alpha/beta hydrolase family CPRO_RS05535 PF13649 Methyltransferase domain CPRO_RS05550 PF06445 GyrI-like small molecule binding domain CPRO_RS05550 PF12833 Helix-turn-helix domain CPRO_RS05570 PF00664 ABC transporter transmembrane region CPRO_RS05570 PF00005 ABC transporter CPRO_RS05575 PF00664 ABC transporter transmembrane region CPRO_RS05575 PF00005 ABC transporter CPRO_RS05590 PF00072 Response regulator receiver domain CPRO_RS05590 PF04397 LytTr DNA-binding domain CPRO_RS05600 PF04011 LemA family CPRO_RS05610 PF00072 Response regulator receiver domain CPRO_RS05610 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS05615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS05620 PF00005 ABC transporter CPRO_RS05625 PF02687 FtsX-like permease family CPRO_RS05630 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS05630 PF00072 Response regulator receiver domain CPRO_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS05635 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS05640 PF02557 D-alanyl-D-alanine carboxypeptidase CPRO_RS05655 PF08669 Glycine cleavage T-protein C-terminal barrel domain CPRO_RS05655 PF01571 Aminomethyltransferase folate-binding domain CPRO_RS05660 PF01597 Glycine cleavage H-protein CPRO_RS05670 PF02347 Glycine cleavage system P-protein CPRO_RS05675 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS05675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_RS05695 PF13419 Haloacid dehalogenase-like hydrolase CPRO_RS05700 PF01910 Thiamine-binding protein CPRO_RS05705 PF00206 Lyase CPRO_RS05705 PF10415 Fumarase C C-terminus CPRO_RS05710 PF00963 Cohesin domain CPRO_RS05710 PF00395 S-layer homology domain CPRO_RS05715 PF03949 Malic enzyme, NAD binding domain CPRO_RS05715 PF00390 Malic enzyme, N-terminal domain CPRO_RS05720 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CPRO_RS05730 PF00588 SpoU rRNA Methylase family CPRO_RS05730 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPRO_RS05740 PF00793 DAHP synthetase I family CPRO_RS05740 PF18152 DAHP synthase ferredoxin-like domain CPRO_RS05750 PF01761 3-dehydroquinate synthase CPRO_RS05755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_RS05760 PF01264 Chorismate synthase CPRO_RS05765 PF01817 Chorismate mutase type II CPRO_RS05765 PF00800 Prephenate dehydratase CPRO_RS05770 PF01220 Dehydroquinase class II CPRO_RS05775 PF00155 Aminotransferase class I and II CPRO_RS05780 PF02381 MraZ protein, putative antitoxin-like CPRO_RS05785 PF01795 MraW methylase family CPRO_RS05795 PF03717 Penicillin-binding Protein dimerisation domain CPRO_RS05795 PF03793 PASTA domain CPRO_RS05795 PF00905 Penicillin binding protein transpeptidase domain CPRO_RS05800 PF03717 Penicillin-binding Protein dimerisation domain CPRO_RS05800 PF03793 PASTA domain CPRO_RS05800 PF00905 Penicillin binding protein transpeptidase domain CPRO_RS05805 PF02875 Mur ligase family, glutamate ligase domain CPRO_RS05805 PF08245 Mur ligase middle domain CPRO_RS05805 PF01225 Mur ligase family, catalytic domain CPRO_RS05810 PF08245 Mur ligase middle domain CPRO_RS05810 PF01225 Mur ligase family, catalytic domain CPRO_RS05810 PF02875 Mur ligase family, glutamate ligase domain CPRO_RS05815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPRO_RS05815 PF00953 Glycosyl transferase family 4 CPRO_RS05820 PF02875 Mur ligase family, glutamate ligase domain CPRO_RS05820 PF08245 Mur ligase middle domain CPRO_RS05825 PF01098 Cell cycle protein CPRO_RS05835 PF08264 Anticodon-binding domain of tRNA CPRO_RS05835 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_RS05835 PF10458 Valyl tRNA synthetase tRNA binding arm CPRO_RS05845 PF00464 Serine hydroxymethyltransferase CPRO_RS05850 PF02811 PHP domain CPRO_RS05855 PF01371 Trp repressor protein CPRO_RS05860 PF13361 UvrD-like helicase C-terminal domain CPRO_RS05860 PF00580 UvrD/REP helicase N-terminal domain CPRO_RS05865 PF12826 Helix-hairpin-helix motif CPRO_RS05865 PF00533 BRCA1 C Terminus (BRCT) domain CPRO_RS05865 PF01653 NAD-dependent DNA ligase adenylation domain CPRO_RS05865 PF03120 NAD-dependent DNA ligase OB-fold domain CPRO_RS05870 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS05875 PF00005 ABC transporter CPRO_RS05885 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS05885 PF03707 Bacterial signalling protein N terminal repeat CPRO_RS05885 PF00563 EAL domain CPRO_RS05905 PF00672 HAMP domain CPRO_RS05905 PF12729 Four helix bundle sensory module for signal transduction CPRO_RS05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS05910 PF00589 Phage integrase family CPRO_RS05910 PF14659 Phage integrase, N-terminal SAM-like domain CPRO_RS05920 PF05525 Branched-chain amino acid transport protein CPRO_RS05930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPRO_RS05930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS05935 PF01168 Alanine racemase, N-terminal domain CPRO_RS05935 PF00842 Alanine racemase, C-terminal domain CPRO_RS05945 PF13686 DsrE/DsrF/DrsH-like family CPRO_RS05955 PF00072 Response regulator receiver domain CPRO_RS05975 PF03063 Prismane/CO dehydrogenase family CPRO_RS05995 PF00753 Metallo-beta-lactamase superfamily CPRO_RS05995 PF00258 Flavodoxin CPRO_RS05995 PF00301 Rubredoxin CPRO_RS06000 PF01235 Sodium:alanine symporter family CPRO_RS06010 PF00672 HAMP domain CPRO_RS06010 PF01627 Hpt domain CPRO_RS06010 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS06010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CPRO_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS06010 PF00072 Response regulator receiver domain CPRO_RS06015 PF00072 Response regulator receiver domain CPRO_RS06030 PF01381 Helix-turn-helix CPRO_RS06035 PF01494 FAD binding domain CPRO_RS06045 PF13344 Haloacid dehalogenase-like hydrolase CPRO_RS06050 PF02562 PhoH-like protein CPRO_RS06050 PF13638 PIN domain CPRO_RS06055 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPRO_RS06055 PF03477 ATP cone domain CPRO_RS06060 PF06463 Molybdenum Cofactor Synthesis C CPRO_RS06060 PF04055 Radical SAM superfamily CPRO_RS06065 PF02645 Uncharacterised protein, DegV family COG1307 CPRO_RS06070 PF02559 CarD-like/TRCF domain CPRO_RS06080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPRO_RS06085 PF00075 RNase H CPRO_RS06090 PF00313 'Cold-shock' DNA-binding domain CPRO_RS06100 PF07724 AAA domain (Cdc48 subfamily) CPRO_RS06100 PF10431 C-terminal, D2-small domain, of ClpB protein CPRO_RS06100 PF02861 Clp amino terminal domain, pathogenicity island component CPRO_RS06100 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS06100 PF17871 AAA lid domain CPRO_RS06105 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS06115 PF01205 Uncharacterized protein family UPF0029 CPRO_RS06115 PF09186 Domain of unknown function (DUF1949) CPRO_RS06120 PF02311 AraC-like ligand binding domain CPRO_RS06120 PF12833 Helix-turn-helix domain CPRO_RS06125 PF00892 EamA-like transporter family CPRO_RS06140 PF08279 HTH domain CPRO_RS06140 PF13280 WYL domain CPRO_RS06150 PF14268 YoaP-like CPRO_RS06150 PF00583 Acetyltransferase (GNAT) family CPRO_RS06165 PF13660 Domain of unknown function (DUF4147) CPRO_RS06165 PF05161 MOFRL family CPRO_RS06170 PF04073 Aminoacyl-tRNA editing domain CPRO_RS06175 PF00919 Uncharacterized protein family UPF0004 CPRO_RS06175 PF01938 TRAM domain CPRO_RS06175 PF04055 Radical SAM superfamily CPRO_RS06185 PF05188 MutS domain II CPRO_RS06185 PF01624 MutS domain I CPRO_RS06185 PF00488 MutS domain V CPRO_RS06185 PF05192 MutS domain III CPRO_RS06185 PF05190 MutS family domain IV CPRO_RS06190 PF08676 MutL C terminal dimerisation domain CPRO_RS06190 PF01119 DNA mismatch repair protein, C-terminal domain CPRO_RS06205 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_RS06205 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_RS06210 PF02645 Uncharacterised protein, DegV family COG1307 CPRO_RS06215 PF01751 Toprim domain CPRO_RS06215 PF01131 DNA topoisomerase CPRO_RS06220 PF06838 Methionine gamma-lyase CPRO_RS06225 PF01943 Polysaccharide biosynthesis protein CPRO_RS06225 PF14667 Polysaccharide biosynthesis C-terminal domain CPRO_RS06230 PF13520 Amino acid permease CPRO_RS06235 PF01899 Na+/H+ ion antiporter subunit CPRO_RS06265 PF00361 Proton-conducting membrane transporter CPRO_RS06270 PF00361 Proton-conducting membrane transporter CPRO_RS06275 PF00361 Proton-conducting membrane transporter CPRO_RS06275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPRO_RS06280 PF00361 Proton-conducting membrane transporter CPRO_RS06285 PF02424 ApbE family CPRO_RS06305 PF17156 Gammaproteobacterial periplasmic sensor domain CPRO_RS06305 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS06310 PF12848 ABC transporter CPRO_RS06310 PF00005 ABC transporter CPRO_RS06320 PF02673 Bacitracin resistance protein BacA CPRO_RS06345 PF00027 Cyclic nucleotide-binding domain CPRO_RS06360 PF06908 YspA SLOG family CPRO_RS06375 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system CPRO_RS06380 PF00239 Resolvase, N terminal domain CPRO_RS06380 PF02796 Helix-turn-helix domain of resolvase CPRO_RS06465 PF02661 Fic/DOC family CPRO_RS06465 PF12728 Helix-turn-helix domain CPRO_RS06495 PF18073 Rubredoxin metal binding domain CPRO_RS06505 PF14659 Phage integrase, N-terminal SAM-like domain CPRO_RS06505 PF00589 Phage integrase family CPRO_RS06525 PF00117 Glutamine amidotransferase class-I CPRO_RS06525 PF02540 NAD synthase CPRO_RS06525 PF00958 GMP synthase C terminal domain CPRO_RS06530 PF00860 Permease family CPRO_RS06535 PF00365 Phosphofructokinase CPRO_RS06545 PF02903 Alpha amylase, N-terminal ig-like domain CPRO_RS06545 PF00128 Alpha amylase, catalytic domain CPRO_RS06550 PF00849 RNA pseudouridylate synthase CPRO_RS06550 PF01479 S4 domain CPRO_RS06555 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS06555 PF07724 AAA domain (Cdc48 subfamily) CPRO_RS06555 PF10431 C-terminal, D2-small domain, of ClpB protein CPRO_RS06555 PF17871 AAA lid domain CPRO_RS06555 PF02861 Clp amino terminal domain, pathogenicity island component CPRO_RS06565 PF18073 Rubredoxin metal binding domain CPRO_RS06570 PF00289 Biotin carboxylase, N-terminal domain CPRO_RS06570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_RS06570 PF00682 HMGL-like CPRO_RS06570 PF02785 Biotin carboxylase C-terminal domain CPRO_RS06570 PF00364 Biotin-requiring enzyme CPRO_RS06570 PF02436 Conserved carboxylase domain CPRO_RS06585 PF00912 Transglycosylase CPRO_RS06585 PF00905 Penicillin binding protein transpeptidase domain CPRO_RS06590 PF10437 Bacterial lipoate protein ligase C-terminus CPRO_RS06590 PF03099 Biotin/lipoate A/B protein ligase family CPRO_RS06600 PF02796 Helix-turn-helix domain of resolvase CPRO_RS06600 PF00239 Resolvase, N terminal domain CPRO_RS06610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPRO_RS06610 PF11490 DNA polymerase III polC-type N-terminus II CPRO_RS06610 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPRO_RS06610 PF02811 PHP domain CPRO_RS06610 PF14579 Helix-hairpin-helix motif CPRO_RS06610 PF00929 Exonuclease CPRO_RS06645 PF18277 AbrB C-terminal domain CPRO_RS06645 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPRO_RS06760 PF10145 Phage-related minor tail protein CPRO_RS06760 PF01464 Transglycosylase SLT domain CPRO_RS06760 PF01551 Peptidase family M23 CPRO_RS06850 PF00183 Hsp90 protein CPRO_RS06895 PF11799 impB/mucB/samB family C-terminal domain CPRO_RS06895 PF00817 impB/mucB/samB family CPRO_RS06900 PF02586 SOS response associated peptidase (SRAP) CPRO_RS06905 PF01522 Polysaccharide deacetylase CPRO_RS06910 PF00294 pfkB family carbohydrate kinase CPRO_RS06915 PF04227 Indigoidine synthase A like protein CPRO_RS06935 PF01595 Cyclin M transmembrane N-terminal domain CPRO_RS06935 PF00571 CBS domain CPRO_RS06935 PF03471 Transporter associated domain CPRO_RS06955 PF00437 Type II/IV secretion system protein CPRO_RS06965 PF02743 Cache domain CPRO_RS06965 PF00672 HAMP domain CPRO_RS06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS06970 PF00085 Thioredoxin CPRO_RS06985 PF03063 Prismane/CO dehydrogenase family CPRO_RS06990 PF03466 LysR substrate binding domain CPRO_RS06990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS06995 PF04055 Radical SAM superfamily CPRO_RS07000 PF01228 Glycine radical CPRO_RS07000 PF02901 Pyruvate formate lyase-like CPRO_RS07005 PF07670 Nucleoside recognition CPRO_RS07005 PF02421 Ferrous iron transport protein B CPRO_RS07005 PF17910 FeoB cytosolic helical domain CPRO_RS07005 PF07664 Ferrous iron transport protein B C terminus CPRO_RS07015 PF00672 HAMP domain CPRO_RS07015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS07015 PF12729 Four helix bundle sensory module for signal transduction CPRO_RS07025 PF07995 Glucose / Sorbosone dehydrogenase CPRO_RS07030 PF12631 MnmE helical domain CPRO_RS07030 PF10396 GTP-binding protein TrmE N-terminus CPRO_RS07030 PF01926 50S ribosome-binding GTPase CPRO_RS07040 PF04055 Radical SAM superfamily CPRO_RS07040 PF06968 Biotin and Thiamin Synthesis associated domain CPRO_RS07050 PF00239 Resolvase, N terminal domain CPRO_RS07050 PF02796 Helix-turn-helix domain of resolvase CPRO_RS07055 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS07060 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS07060 PF00072 Response regulator receiver domain CPRO_RS07075 PF00005 ABC transporter CPRO_RS07085 PF00196 Bacterial regulatory proteins, luxR family CPRO_RS07090 PF00202 Aminotransferase class-III CPRO_RS07095 PF00171 Aldehyde dehydrogenase family CPRO_RS07100 PF03553 Na+/H+ antiporter family CPRO_RS07105 PF08281 Sigma-70, region 4 CPRO_RS07105 PF04542 Sigma-70 region 2 CPRO_RS07140 PF07664 Ferrous iron transport protein B C terminus CPRO_RS07140 PF02421 Ferrous iron transport protein B CPRO_RS07140 PF17910 FeoB cytosolic helical domain CPRO_RS07140 PF07670 Nucleoside recognition CPRO_RS07165 PF02638 Glycosyl hydrolase-like 10 CPRO_RS07170 PF08501 Shikimate dehydrogenase substrate binding domain CPRO_RS07185 PF01047 MarR family CPRO_RS07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS07190 PF00672 HAMP domain CPRO_RS07195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CPRO_RS07210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_RS07210 PF09180 Prolyl-tRNA synthetase, C-terminal CPRO_RS07210 PF03129 Anticodon binding domain CPRO_RS07220 PF02073 Thermophilic metalloprotease (M29) CPRO_RS07225 PF00654 Voltage gated chloride channel CPRO_RS07230 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_RS07235 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS07240 PF00005 ABC transporter CPRO_RS07245 PF01906 Putative heavy-metal-binding CPRO_RS07250 PF01544 CorA-like Mg2+ transporter protein CPRO_RS07260 PF02824 TGS domain CPRO_RS07260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_RS07260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_RS07260 PF03129 Anticodon binding domain CPRO_RS07265 PF00707 Translation initiation factor IF-3, C-terminal domain CPRO_RS07265 PF05198 Translation initiation factor IF-3, N-terminal domain CPRO_RS07270 PF01632 Ribosomal protein L35 CPRO_RS07275 PF00453 Ribosomal protein L20 CPRO_RS07285 PF01050 Mannose-6-phosphate isomerase CPRO_RS07285 PF00483 Nucleotidyl transferase CPRO_RS07295 PF00202 Aminotransferase class-III CPRO_RS07305 PF01048 Phosphorylase superfamily CPRO_RS07320 PF00294 pfkB family carbohydrate kinase CPRO_RS07325 PF02525 Flavodoxin-like fold CPRO_RS07330 PF08240 Alcohol dehydrogenase GroES-like domain CPRO_RS07330 PF13823 Alcohol dehydrogenase GroES-associated CPRO_RS07330 PF00107 Zinc-binding dehydrogenase CPRO_RS07335 PF00149 Calcineurin-like phosphoesterase CPRO_RS07335 PF12320 Type 5 capsule protein repressor C-terminal domain CPRO_RS07340 PF13476 AAA domain CPRO_RS07345 PF13476 AAA domain CPRO_RS07355 PF02441 Flavoprotein CPRO_RS07360 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_RS07365 PF04204 Homoserine O-succinyltransferase CPRO_RS07370 PF08486 Stage II sporulation protein CPRO_RS07380 PF02547 Queuosine biosynthesis protein CPRO_RS07385 PF12002 MgsA AAA+ ATPase C terminal CPRO_RS07385 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS07385 PF16193 AAA C-terminal domain CPRO_RS07395 PF01409 tRNA synthetases class II core domain (F) CPRO_RS07395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPRO_RS07400 PF03147 Ferredoxin-fold anticodon binding domain CPRO_RS07400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPRO_RS07400 PF03484 tRNA synthetase B5 domain CPRO_RS07400 PF03483 B3/4 domain CPRO_RS07400 PF01588 Putative tRNA binding domain CPRO_RS07405 PF00700 Bacterial flagellin C-terminal helical region CPRO_RS07405 PF00669 Bacterial flagellin N-terminal helical region CPRO_RS07410 PF00563 EAL domain CPRO_RS07410 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS07410 PF03707 Bacterial signalling protein N terminal repeat CPRO_RS07415 PF00679 Elongation factor G C-terminus CPRO_RS07415 PF14492 Elongation Factor G, domain II CPRO_RS07415 PF00009 Elongation factor Tu GTP binding domain CPRO_RS07415 PF03144 Elongation factor Tu domain 2 CPRO_RS07420 PF14667 Polysaccharide biosynthesis C-terminal domain CPRO_RS07420 PF01943 Polysaccharide biosynthesis protein CPRO_RS07430 PF08459 UvrC Helix-hairpin-helix N-terminal CPRO_RS07430 PF02151 UvrB/uvrC motif CPRO_RS07430 PF01541 GIY-YIG catalytic domain CPRO_RS07430 PF12826 Helix-hairpin-helix motif CPRO_RS07435 PF02603 HPr Serine kinase N terminus CPRO_RS07435 PF07475 HPr Serine kinase C-terminal domain CPRO_RS07440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPRO_RS07440 PF01565 FAD binding domain CPRO_RS07445 PF03668 P-loop ATPase protein family CPRO_RS07450 PF10298 WhiA N-terminal LAGLIDADG-like domain CPRO_RS07450 PF14527 WhiA LAGLIDADG-like domain CPRO_RS07450 PF02650 WhiA C-terminal HTH domain CPRO_RS07455 PF00381 PTS HPr component phosphorylation site CPRO_RS07460 PF01170 Putative RNA methylase family UPF0020 CPRO_RS07460 PF02926 THUMP domain CPRO_RS07465 PF01702 Queuine tRNA-ribosyltransferase CPRO_RS07470 PF02699 Preprotein translocase subunit CPRO_RS07480 PF00005 ABC transporter CPRO_RS07490 PF02653 Branched-chain amino acid transport system / permease component CPRO_RS07495 PF01156 Inosine-uridine preferring nucleoside hydrolase CPRO_RS07500 PF01156 Inosine-uridine preferring nucleoside hydrolase CPRO_RS07510 PF02915 Rubrerythrin CPRO_RS07515 PF05193 Peptidase M16 inactive domain CPRO_RS07515 PF00675 Insulinase (Peptidase family M16) CPRO_RS07515 PF08367 Peptidase M16C associated CPRO_RS07525 PF01551 Peptidase family M23 CPRO_RS07530 PF01648 4'-phosphopantetheinyl transferase superfamily CPRO_RS07535 PF08264 Anticodon-binding domain of tRNA CPRO_RS07535 PF09334 tRNA synthetases class I (M) CPRO_RS07535 PF13603 Leucyl-tRNA synthetase, Domain 2 CPRO_RS07535 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_RS07540 PF00005 ABC transporter CPRO_RS07540 PF00664 ABC transporter transmembrane region CPRO_RS07545 PF00664 ABC transporter transmembrane region CPRO_RS07545 PF00005 ABC transporter CPRO_RS07550 PF01047 MarR family CPRO_RS07555 PF03006 Haemolysin-III related CPRO_RS07565 PF11490 DNA polymerase III polC-type N-terminus II CPRO_RS07565 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPRO_RS07565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPRO_RS07565 PF14579 Helix-hairpin-helix motif CPRO_RS07565 PF02811 PHP domain CPRO_RS07565 PF00929 Exonuclease CPRO_RS07570 PF04551 GcpE protein CPRO_RS07575 PF13180 PDZ domain CPRO_RS07575 PF02163 Peptidase family M50 CPRO_RS07580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPRO_RS07580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPRO_RS07580 PF13288 DXP reductoisomerase C-terminal domain CPRO_RS07590 PF01255 Putative undecaprenyl diphosphate synthase CPRO_RS07595 PF01765 Ribosome recycling factor CPRO_RS07600 PF00696 Amino acid kinase family CPRO_RS07605 PF00889 Elongation factor TS CPRO_RS07610 PF00318 Ribosomal protein S2 CPRO_RS07615 PF01396 Topoisomerase DNA binding C4 zinc finger CPRO_RS07615 PF01751 Toprim domain CPRO_RS07615 PF01131 DNA topoisomerase CPRO_RS07620 PF02481 DNA recombination-mediator protein A CPRO_RS07620 PF17782 DprA winged helix domain CPRO_RS07625 PF01078 Magnesium chelatase, subunit ChlI CPRO_RS07625 PF13335 Magnesium chelatase, subunit ChlI C-terminal CPRO_RS07635 PF02743 Cache domain CPRO_RS07635 PF00672 HAMP domain CPRO_RS07635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS07640 PF00072 Response regulator receiver domain CPRO_RS07650 PF00082 Subtilase family CPRO_RS07665 PF05231 MASE1 CPRO_RS07665 PF00563 EAL domain CPRO_RS07670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS07670 PF12729 Four helix bundle sensory module for signal transduction CPRO_RS07670 PF00672 HAMP domain CPRO_RS07675 PF02666 Phosphatidylserine decarboxylase CPRO_RS07680 PF01066 CDP-alcohol phosphatidyltransferase CPRO_RS07700 PF05525 Branched-chain amino acid transport protein CPRO_RS07705 PF00155 Aminotransferase class I and II CPRO_RS07710 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CPRO_RS07710 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CPRO_RS07725 PF07729 FCD domain CPRO_RS07725 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS07740 PF01964 Radical SAM ThiC family CPRO_RS07745 PF02581 Thiamine monophosphate synthase CPRO_RS07755 PF05690 Thiazole biosynthesis protein ThiG CPRO_RS07760 PF00899 ThiF family CPRO_RS07765 PF05690 Thiazole biosynthesis protein ThiG CPRO_RS07765 PF02597 ThiS family CPRO_RS07770 PF02632 BioY family CPRO_RS07775 PF06968 Biotin and Thiamin Synthesis associated domain CPRO_RS07775 PF04055 Radical SAM superfamily CPRO_RS07785 PF00202 Aminotransferase class-III CPRO_RS07790 PF00753 Metallo-beta-lactamase superfamily CPRO_RS07795 PF00873 AcrB/AcrD/AcrF family CPRO_RS07805 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS07810 PF00578 AhpC/TSA family CPRO_RS07810 PF10417 C-terminal domain of 1-Cys peroxiredoxin CPRO_RS07840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPRO_RS07845 PF03063 Prismane/CO dehydrogenase family CPRO_RS07855 PF00378 Enoyl-CoA hydratase/isomerase CPRO_RS07860 PF01144 Coenzyme A transferase CPRO_RS07865 PF00158 Sigma-54 interaction domain CPRO_RS07865 PF13426 PAS domain CPRO_RS07865 PF02954 Bacterial regulatory protein, Fis family CPRO_RS07870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_RS07870 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_RS07870 PF10371 Domain of unknown function CPRO_RS07870 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPRO_RS07870 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_RS07880 PF01266 FAD dependent oxidoreductase CPRO_RS07880 PF00355 Rieske [2Fe-2S] domain CPRO_RS07885 PF05067 Manganese containing catalase CPRO_RS07905 PF03061 Thioesterase superfamily CPRO_RS07910 PF00171 Aldehyde dehydrogenase family CPRO_RS07920 PF00701 Dihydrodipicolinate synthetase family CPRO_RS07925 PF01266 FAD dependent oxidoreductase CPRO_RS07935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS07935 PF04324 BFD-like [2Fe-2S] binding domain CPRO_RS07945 PF00209 Sodium:neurotransmitter symporter family CPRO_RS07955 PF14525 AraC-binding-like domain CPRO_RS07955 PF12833 Helix-turn-helix domain CPRO_RS07960 PF01613 Flavin reductase like domain CPRO_RS07965 PF00672 HAMP domain CPRO_RS07965 PF02743 Cache domain CPRO_RS07965 PF02743 Cache domain CPRO_RS07965 PF00672 HAMP domain CPRO_RS07965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS07965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS07975 PF00892 EamA-like transporter family CPRO_RS07980 PF01638 HxlR-like helix-turn-helix CPRO_RS07990 PF02702 Osmosensitive K+ channel His kinase sensor domain CPRO_RS07990 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS07990 PF13493 Domain of unknown function (DUF4118) CPRO_RS07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS07995 PF00072 Response regulator receiver domain CPRO_RS07995 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS08005 PF02080 TrkA-C domain CPRO_RS08005 PF02254 TrkA-N domain CPRO_RS08010 PF02254 TrkA-N domain CPRO_RS08010 PF02080 TrkA-C domain CPRO_RS08015 PF02386 Cation transport protein CPRO_RS08020 PF01799 [2Fe-2S] binding domain CPRO_RS08020 PF00111 2Fe-2S iron-sulfur cluster binding domain CPRO_RS08030 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPRO_RS08030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CPRO_RS08050 PF01738 Dienelactone hydrolase family CPRO_RS08100 PF08031 Berberine and berberine like CPRO_RS08100 PF01565 FAD binding domain CPRO_RS08130 PF03773 Predicted permease CPRO_RS08140 PF01758 Sodium Bile acid symporter family CPRO_RS08150 PF03649 Uncharacterised protein family (UPF0014) CPRO_RS08155 PF00005 ABC transporter CPRO_RS08165 PF12833 Helix-turn-helix domain CPRO_RS08165 PF06445 GyrI-like small molecule binding domain CPRO_RS08180 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS08185 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS08185 PF00072 Response regulator receiver domain CPRO_RS08195 PF01554 MatE CPRO_RS08200 PF00334 Nucleoside diphosphate kinase CPRO_RS08205 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS08205 PF13977 BetI-type transcriptional repressor, C-terminal CPRO_RS08210 PF00005 ABC transporter CPRO_RS08220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPRO_RS08225 PF03576 Peptidase family S58 CPRO_RS08235 PF07969 Amidohydrolase family CPRO_RS08240 PF00474 Sodium:solute symporter family CPRO_RS08250 PF02558 Ketopantoate reductase PanE/ApbA CPRO_RS08250 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPRO_RS08255 PF02548 Ketopantoate hydroxymethyltransferase CPRO_RS08260 PF09339 IclR helix-turn-helix domain CPRO_RS08260 PF01614 Bacterial transcriptional regulator CPRO_RS08265 PF08668 HDOD domain CPRO_RS08265 PF00563 EAL domain CPRO_RS08280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS08280 PF02743 Cache domain CPRO_RS08280 PF00672 HAMP domain CPRO_RS08290 PF00150 Cellulase (glycosyl hydrolase family 5) CPRO_RS08290 PF03424 Carbohydrate binding domain (family 17/28) CPRO_RS08290 PF00395 S-layer homology domain CPRO_RS08325 PF00005 ABC transporter CPRO_RS08330 PF00072 Response regulator receiver domain CPRO_RS08330 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS08335 PF00672 HAMP domain CPRO_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS08335 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS08350 PF07228 Stage II sporulation protein E (SpoIIE) CPRO_RS08350 PF00672 HAMP domain CPRO_RS08365 PF00551 Formyl transferase CPRO_RS08365 PF02911 Formyl transferase, C-terminal domain CPRO_RS08365 PF01370 NAD dependent epimerase/dehydratase family CPRO_RS08370 PF01740 STAS domain CPRO_RS08375 PF04055 Radical SAM superfamily CPRO_RS08375 PF06463 Molybdenum Cofactor Synthesis C CPRO_RS08390 PF03412 Peptidase C39 family CPRO_RS08390 PF00664 ABC transporter transmembrane region CPRO_RS08390 PF00005 ABC transporter CPRO_RS08395 PF00005 ABC transporter CPRO_RS08395 PF03412 Peptidase C39 family CPRO_RS08395 PF00664 ABC transporter transmembrane region CPRO_RS08410 PF17152 Periplasmic sensor domain CPRO_RS08410 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS08440 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS08440 PF17754 MftR C-terminal domain CPRO_RS08450 PF07690 Major Facilitator Superfamily CPRO_RS08455 PF10057 Uncharacterized conserved protein (DUF2294) CPRO_RS08475 PF00994 Probable molybdopterin binding domain CPRO_RS08485 PF01967 MoaC family CPRO_RS08490 PF04055 Radical SAM superfamily CPRO_RS08490 PF06463 Molybdenum Cofactor Synthesis C CPRO_RS08495 PF03453 MoeA N-terminal region (domain I and II) CPRO_RS08495 PF00994 Probable molybdopterin binding domain CPRO_RS08495 PF03454 MoeA C-terminal region (domain IV) CPRO_RS08500 PF03453 MoeA N-terminal region (domain I and II) CPRO_RS08500 PF03454 MoeA C-terminal region (domain IV) CPRO_RS08500 PF00994 Probable molybdopterin binding domain CPRO_RS08505 PF00005 ABC transporter CPRO_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS08515 PF12849 PBP superfamily domain CPRO_RS08520 PF00899 ThiF family CPRO_RS08520 PF00581 Rhodanese-like domain CPRO_RS08560 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CPRO_RS08560 PF12733 Cadherin-like beta sandwich domain CPRO_RS08620 PF13361 UvrD-like helicase C-terminal domain CPRO_RS08620 PF00580 UvrD/REP helicase N-terminal domain CPRO_RS08625 PF02463 RecF/RecN/SMC N terminal domain CPRO_RS08655 PF07508 Recombinase CPRO_RS08655 PF13408 Recombinase zinc beta ribbon domain CPRO_RS08680 PF01869 BadF/BadG/BcrA/BcrD ATPase family CPRO_RS08695 PF00005 ABC transporter CPRO_RS08715 PF03063 Prismane/CO dehydrogenase family CPRO_RS08720 PF00301 Rubredoxin CPRO_RS08740 PF00027 Cyclic nucleotide-binding domain CPRO_RS08740 PF13545 Crp-like helix-turn-helix domain CPRO_RS08750 PF00258 Flavodoxin CPRO_RS08750 PF00301 Rubredoxin CPRO_RS08750 PF00753 Metallo-beta-lactamase superfamily CPRO_RS08775 PF03063 Prismane/CO dehydrogenase family CPRO_RS08805 PF01527 Transposase CPRO_RS08805 PF00665 Integrase core domain CPRO_RS08805 PF13276 HTH-like domain CPRO_RS08815 PF00350 Dynamin family CPRO_RS08820 PF01546 Peptidase family M20/M25/M40 CPRO_RS08820 PF07687 Peptidase dimerisation domain CPRO_RS08825 PF03606 C4-dicarboxylate anaerobic carrier CPRO_RS08830 PF01546 Peptidase family M20/M25/M40 CPRO_RS08835 PF00158 Sigma-54 interaction domain CPRO_RS08840 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS08845 PF01966 HD domain CPRO_RS08850 PF01610 Transposase CPRO_RS08850 PF13683 Integrase core domain CPRO_RS08855 PF00578 AhpC/TSA family CPRO_RS08855 PF10417 C-terminal domain of 1-Cys peroxiredoxin CPRO_RS08870 PF00892 EamA-like transporter family CPRO_RS08875 PF00158 Sigma-54 interaction domain CPRO_RS08875 PF02954 Bacterial regulatory protein, Fis family CPRO_RS08875 PF13426 PAS domain CPRO_RS08885 PF07969 Amidohydrolase family CPRO_RS08910 PF00665 Integrase core domain CPRO_RS08910 PF01527 Transposase CPRO_RS08910 PF13276 HTH-like domain CPRO_RS08920 PF01348 Type II intron maturase CPRO_RS08920 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_RS08930 PF02810 SEC-C motif CPRO_RS08940 PF13361 UvrD-like helicase C-terminal domain CPRO_RS08940 PF00580 UvrD/REP helicase N-terminal domain CPRO_RS08945 PF02463 RecF/RecN/SMC N terminal domain CPRO_RS08945 PF06470 SMC proteins Flexible Hinge Domain CPRO_RS09025 PF00665 Integrase core domain CPRO_RS09025 PF13936 Helix-turn-helix domain CPRO_RS09040 PF02229 Transcriptional Coactivator p15 (PC4) CPRO_RS09045 PF04851 Type III restriction enzyme, res subunit CPRO_RS09045 PF08774 VRR-NUC domain CPRO_RS09050 PF01555 DNA methylase CPRO_RS09050 PF18273 Type III R-M EcoP15I C-terminal domain CPRO_RS09085 PF00565 Staphylococcal nuclease homologue CPRO_RS09095 PF03432 Relaxase/Mobilisation nuclease domain CPRO_RS09115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_RS09115 PF01348 Type II intron maturase CPRO_RS09140 PF05973 Phage derived protein Gp49-like (DUF891) CPRO_RS09150 PF01751 Toprim domain CPRO_RS09150 PF01131 DNA topoisomerase CPRO_RS09170 PF00877 NlpC/P60 family CPRO_RS09180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_RS09180 PF01348 Type II intron maturase CPRO_RS09240 PF02195 ParB-like nuclease domain CPRO_RS09240 PF17762 HTH domain found in ParB protein CPRO_RS09245 PF13614 AAA domain CPRO_RS09255 PF13408 Recombinase zinc beta ribbon domain CPRO_RS09255 PF00239 Resolvase, N terminal domain CPRO_RS09255 PF07508 Recombinase CPRO_RS09280 PF00873 AcrB/AcrD/AcrF family CPRO_RS09300 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS09305 PF01797 Transposase IS200 like CPRO_RS09320 PF00753 Metallo-beta-lactamase superfamily CPRO_RS09355 PF00877 NlpC/P60 family CPRO_RS09360 PF01209 ubiE/COQ5 methyltransferase family CPRO_RS09380 PF00753 Metallo-beta-lactamase superfamily CPRO_RS09390 PF13411 MerR HTH family regulatory protein CPRO_RS09390 PF07739 TipAS antibiotic-recognition domain CPRO_RS09455 PF13280 WYL domain CPRO_RS09455 PF08279 HTH domain CPRO_RS09460 PF08279 HTH domain CPRO_RS09460 PF13280 WYL domain CPRO_RS09475 PF13411 MerR HTH family regulatory protein CPRO_RS09480 PF00005 ABC transporter CPRO_RS09525 PF00437 Type II/IV secretion system protein CPRO_RS09530 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_RS09570 PF04026 SpoVG CPRO_RS09600 PF00589 Phage integrase family CPRO_RS09605 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_RS09605 PF00589 Phage integrase family CPRO_RS09610 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_RS09610 PF00589 Phage integrase family CPRO_RS09675 PF00589 Phage integrase family CPRO_RS09675 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_RS09705 PF01348 Type II intron maturase CPRO_RS09705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_RS09710 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CPRO_RS09710 PF00270 DEAD/DEAH box helicase CPRO_RS09710 PF17191 RecG wedge domain CPRO_RS09765 PF01938 TRAM domain CPRO_RS09765 PF05958 tRNA (Uracil-5-)-methyltransferase CPRO_RS09780 PF01336 OB-fold nucleic acid binding domain CPRO_RS09780 PF01966 HD domain CPRO_RS09810 PF00909 Ammonium Transporter Family CPRO_RS09815 PF04545 Sigma-70, region 4 CPRO_RS09815 PF04542 Sigma-70 region 2 CPRO_RS09815 PF04539 Sigma-70 region 3 CPRO_RS09825 PF07729 FCD domain CPRO_RS09825 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS09840 PF02690 Na+/Pi-cotransporter CPRO_RS09845 PF00742 Homoserine dehydrogenase CPRO_RS09845 PF00696 Amino acid kinase family CPRO_RS09845 PF03447 Homoserine dehydrogenase, NAD binding domain CPRO_RS09850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPRO_RS09855 PF03435 Saccharopine dehydrogenase NADP binding domain CPRO_RS09855 PF16653 Saccharopine dehydrogenase C-terminal domain CPRO_RS09860 PF00491 Arginase family CPRO_RS09865 PF17284 Spermidine synthase tetramerisation domain CPRO_RS09870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPRO_RS09870 PF01276 Orn/Lys/Arg decarboxylase, major domain CPRO_RS09875 PF02675 S-adenosylmethionine decarboxylase CPRO_RS09880 PF03466 LysR substrate binding domain CPRO_RS09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS09885 PF00107 Zinc-binding dehydrogenase CPRO_RS09885 PF08240 Alcohol dehydrogenase GroES-like domain CPRO_RS09890 PF16736 Single Cache-like CPRO_RS09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS09890 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS09890 PF00989 PAS fold CPRO_RS09895 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS09895 PF00072 Response regulator receiver domain CPRO_RS09905 PF00654 Voltage gated chloride channel CPRO_RS09910 PF13309 HTH domain CPRO_RS09910 PF08348 YheO-like PAS domain CPRO_RS09915 PF01184 GPR1/FUN34/yaaH family CPRO_RS09920 PF01746 tRNA (Guanine-1)-methyltransferase CPRO_RS09925 PF01782 RimM N-terminal domain CPRO_RS09925 PF05239 PRC-barrel domain CPRO_RS09935 PF00886 Ribosomal protein S16 CPRO_RS09940 PF00448 SRP54-type protein, GTPase domain CPRO_RS09940 PF02881 SRP54-type protein, helical bundle domain CPRO_RS09940 PF02978 Signal peptide binding domain CPRO_RS09945 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CPRO_RS09950 PF00300 Histidine phosphatase superfamily (branch 1) CPRO_RS09960 PF02664 S-Ribosylhomocysteinase (LuxS) CPRO_RS09965 PF00375 Sodium:dicarboxylate symporter family CPRO_RS09970 PF03313 Serine dehydratase alpha chain CPRO_RS09975 PF03315 Serine dehydratase beta chain CPRO_RS09975 PF01842 ACT domain CPRO_RS09980 PF00118 TCP-1/cpn60 chaperonin family CPRO_RS09985 PF00166 Chaperonin 10 Kd subunit CPRO_RS09990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS09995 PF03144 Elongation factor Tu domain 2 CPRO_RS09995 PF00679 Elongation factor G C-terminus CPRO_RS09995 PF00009 Elongation factor Tu GTP binding domain CPRO_RS09995 PF03764 Elongation factor G, domain IV CPRO_RS09995 PF14492 Elongation Factor G, domain II CPRO_RS10000 PF01592 NifU-like N terminal domain CPRO_RS10005 PF00266 Aminotransferase class-V CPRO_RS10010 PF01381 Helix-turn-helix CPRO_RS10015 PF02463 RecF/RecN/SMC N terminal domain CPRO_RS10020 PF01316 Arginine repressor, DNA binding domain CPRO_RS10020 PF02863 Arginine repressor, C-terminal domain CPRO_RS10025 PF01513 ATP-NAD kinase CPRO_RS10030 PF01728 FtsJ-like methyltransferase CPRO_RS10030 PF01479 S4 domain CPRO_RS10035 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPRO_RS10035 PF02780 Transketolase, C-terminal domain CPRO_RS10035 PF02779 Transketolase, pyrimidine binding domain CPRO_RS10040 PF02681 Divergent PAP2 family CPRO_RS10045 PF00348 Polyprenyl synthetase CPRO_RS10050 PF02609 Exonuclease VII small subunit CPRO_RS10055 PF02601 Exonuclease VII, large subunit CPRO_RS10055 PF13742 OB-fold nucleic acid binding domain CPRO_RS10060 PF01029 NusB family CPRO_RS10065 PF03780 Asp23 family, cell envelope-related function CPRO_RS10090 PF06686 Stage III sporulation protein AC/AD protein family CPRO_RS10095 PF06686 Stage III sporulation protein AC/AD protein family CPRO_RS10110 PF04397 LytTr DNA-binding domain CPRO_RS10110 PF00072 Response regulator receiver domain CPRO_RS10125 PF00465 Iron-containing alcohol dehydrogenase CPRO_RS10140 PF00709 Adenylosuccinate synthetase CPRO_RS10160 PF03772 Competence protein CPRO_RS10160 PF00753 Metallo-beta-lactamase superfamily CPRO_RS10160 PF13567 Domain of unknown function (DUF4131) CPRO_RS10170 PF00989 PAS fold CPRO_RS10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS10170 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS10170 PF16736 Single Cache-like CPRO_RS10175 PF00072 Response regulator receiver domain CPRO_RS10175 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS10185 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_RS10185 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_RS10190 PF01476 LysM domain CPRO_RS10190 PF00877 NlpC/P60 family CPRO_RS10195 PF00005 ABC transporter CPRO_RS10195 PF00664 ABC transporter transmembrane region CPRO_RS10200 PF08021 Siderophore-interacting FAD-binding domain CPRO_RS10200 PF00664 ABC transporter transmembrane region CPRO_RS10200 PF04954 Siderophore-interacting protein CPRO_RS10200 PF00005 ABC transporter CPRO_RS10205 PF12833 Helix-turn-helix domain CPRO_RS10215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPRO_RS10215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPRO_RS10230 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CPRO_RS10240 PF07694 5TMR of 5TMR-LYT CPRO_RS10240 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS10340 PF00239 Resolvase, N terminal domain CPRO_RS10340 PF02796 Helix-turn-helix domain of resolvase CPRO_RS10410 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_RS10410 PF00589 Phage integrase family CPRO_RS10415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPRO_RS10415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPRO_RS10420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPRO_RS10420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPRO_RS10430 PF04545 Sigma-70, region 4 CPRO_RS10430 PF04539 Sigma-70 region 3 CPRO_RS10430 PF04542 Sigma-70 region 2 CPRO_RS10435 PF13581 Histidine kinase-like ATPase domain CPRO_RS10440 PF01740 STAS domain CPRO_RS10445 PF04545 Sigma-70, region 4 CPRO_RS10445 PF04542 Sigma-70 region 2 CPRO_RS10470 PF01180 Dihydroorotate dehydrogenase CPRO_RS10475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS10475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPRO_RS10480 PF01546 Peptidase family M20/M25/M40 CPRO_RS10480 PF07687 Peptidase dimerisation domain CPRO_RS10485 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CPRO_RS10490 PF01979 Amidohydrolase family CPRO_RS10500 PF13411 MerR HTH family regulatory protein CPRO_RS10500 PF06445 GyrI-like small molecule binding domain CPRO_RS10515 PF03061 Thioesterase superfamily CPRO_RS10520 PF02515 CoA-transferase family III CPRO_RS10525 PF00766 Electron transfer flavoprotein FAD-binding domain CPRO_RS10525 PF01012 Electron transfer flavoprotein domain CPRO_RS10530 PF01012 Electron transfer flavoprotein domain CPRO_RS10535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPRO_RS10535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPRO_RS10535 PF02770 Acyl-CoA dehydrogenase, middle domain CPRO_RS10555 PF01478 Type IV leader peptidase family CPRO_RS10555 PF06750 Bacterial Peptidase A24 N-terminal domain CPRO_RS10560 PF07963 Prokaryotic N-terminal methylation motif CPRO_RS10560 PF00114 Pilin (bacterial filament) CPRO_RS10565 PF00482 Type II secretion system (T2SS), protein F CPRO_RS10570 PF00437 Type II/IV secretion system protein CPRO_RS10575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CPRO_RS10575 PF00437 Type II/IV secretion system protein CPRO_RS10605 PF01047 MarR family CPRO_RS10610 PF01136 Peptidase family U32 CPRO_RS10610 PF16325 Peptidase family U32 C-terminal domain CPRO_RS10615 PF01596 O-methyltransferase CPRO_RS10620 PF02618 YceG-like family CPRO_RS10625 PF02875 Mur ligase family, glutamate ligase domain CPRO_RS10625 PF08245 Mur ligase middle domain CPRO_RS10655 PF14815 NUDIX domain CPRO_RS10655 PF00730 HhH-GPD superfamily base excision DNA repair protein CPRO_RS10660 PF01226 Formate/nitrite transporter CPRO_RS10665 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS10670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPRO_RS10670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPRO_RS10675 PF02702 Osmosensitive K+ channel His kinase sensor domain CPRO_RS10675 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS10675 PF13493 Domain of unknown function (DUF4118) CPRO_RS10680 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS10680 PF00072 Response regulator receiver domain CPRO_RS10715 PF02463 RecF/RecN/SMC N terminal domain CPRO_RS10715 PF06470 SMC proteins Flexible Hinge Domain CPRO_RS10720 PF01979 Amidohydrolase family CPRO_RS10725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPRO_RS10725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPRO_RS10730 PF00849 RNA pseudouridylate synthase CPRO_RS10730 PF01479 S4 domain CPRO_RS10735 PF01252 Signal peptidase (SPase) II CPRO_RS10755 PF04472 Cell division protein SepF CPRO_RS10760 PF01168 Alanine racemase, N-terminal domain CPRO_RS10770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_RS10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS10775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPRO_RS10775 PF02817 e3 binding domain CPRO_RS10775 PF00364 Biotin-requiring enzyme CPRO_RS10780 PF01513 ATP-NAD kinase CPRO_RS10785 PF02779 Transketolase, pyrimidine binding domain CPRO_RS10785 PF02780 Transketolase, C-terminal domain CPRO_RS10790 PF00676 Dehydrogenase E1 component CPRO_RS10800 PF00158 Sigma-54 interaction domain CPRO_RS10800 PF02954 Bacterial regulatory protein, Fis family CPRO_RS10800 PF13426 PAS domain CPRO_RS10805 PF09547 Stage IV sporulation protein A (spore_IV_A) CPRO_RS10835 PF01638 HxlR-like helix-turn-helix CPRO_RS10850 PF01381 Helix-turn-helix CPRO_RS10850 PF07883 Cupin domain CPRO_RS10855 PF02901 Pyruvate formate lyase-like CPRO_RS10855 PF01228 Glycine radical CPRO_RS10860 PF04055 Radical SAM superfamily CPRO_RS10870 PF01966 HD domain CPRO_RS10870 PF11871 Domain of unknown function (DUF3391) CPRO_RS10885 PF01168 Alanine racemase, N-terminal domain CPRO_RS10885 PF00842 Alanine racemase, C-terminal domain CPRO_RS10890 PF01235 Sodium:alanine symporter family CPRO_RS10895 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_RS10900 PF13411 MerR HTH family regulatory protein CPRO_RS10910 PF04542 Sigma-70 region 2 CPRO_RS10910 PF08281 Sigma-70, region 4 CPRO_RS10915 PF05991 YacP-like NYN domain CPRO_RS10920 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPRO_RS10920 PF00588 SpoU rRNA Methylase family CPRO_RS10925 PF00636 Ribonuclease III domain CPRO_RS10930 PF01406 tRNA synthetases class I (C) catalytic domain CPRO_RS10930 PF09190 DALR domain CPRO_RS10935 PF06426 Serine acetyltransferase, N-terminal CPRO_RS10935 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_RS10940 PF02542 YgbB family CPRO_RS11005 PF12127 SigmaW regulon antibacterial CPRO_RS11020 PF01726 LexA DNA binding domain CPRO_RS11020 PF00717 Peptidase S24-like CPRO_RS11025 PF02540 NAD synthase CPRO_RS11025 PF00795 Carbon-nitrogen hydrolase CPRO_RS11030 PF00989 PAS fold CPRO_RS11030 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS11030 PF16736 Single Cache-like CPRO_RS11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS11040 PF00072 Response regulator receiver domain CPRO_RS11040 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS11045 PF01713 Smr domain CPRO_RS11045 PF00488 MutS domain V CPRO_RS11050 PF06874 Firmicute fructose-1,6-bisphosphatase CPRO_RS11065 PF13419 Haloacid dehalogenase-like hydrolase CPRO_RS11075 PF00814 Glycoprotease family CPRO_RS11080 PF00753 Metallo-beta-lactamase superfamily CPRO_RS11085 PF00830 Ribosomal L28 family CPRO_RS11095 PF00834 Ribulose-phosphate 3 epimerase family CPRO_RS11100 PF16745 RsgA N-terminal domain CPRO_RS11100 PF03193 RsgA GTPase CPRO_RS11105 PF03793 PASTA domain CPRO_RS11105 PF03793 PASTA domain CPRO_RS11105 PF00069 Protein kinase domain CPRO_RS11105 PF00069 Protein kinase domain CPRO_RS11115 PF04055 Radical SAM superfamily CPRO_RS11120 PF01029 NusB family CPRO_RS11120 PF01189 16S rRNA methyltransferase RsmB/F CPRO_RS11125 PF04298 Putative neutral zinc metallopeptidase CPRO_RS11130 PF00551 Formyl transferase CPRO_RS11130 PF02911 Formyl transferase, C-terminal domain CPRO_RS11135 PF01327 Polypeptide deformylase CPRO_RS11140 PF00271 Helicase conserved C-terminal domain CPRO_RS11140 PF17764 3′ DNA-binding domain (3′BD) CPRO_RS11140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPRO_RS11140 PF04851 Type III restriction enzyme, res subunit CPRO_RS11140 PF18074 Primosomal protein N C-terminal domain CPRO_RS11145 PF00270 DEAD/DEAH box helicase CPRO_RS11145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPRO_RS11145 PF00271 Helicase conserved C-terminal domain CPRO_RS11145 PF17764 3′ DNA-binding domain (3′BD) CPRO_RS11145 PF18074 Primosomal protein N C-terminal domain CPRO_RS11150 PF01192 RNA polymerase Rpb6 CPRO_RS11155 PF00625 Guanylate kinase CPRO_RS11160 PF04025 Domain of unknown function (DUF370) CPRO_RS11165 PF08340 Domain of unknown function (DUF1732) CPRO_RS11165 PF03755 YicC-like family, N-terminal region CPRO_RS11170 PF05670 NFACT protein RNA binding domain CPRO_RS11180 PF01966 HD domain CPRO_RS11180 PF12072 Domain of unknown function (DUF3552) CPRO_RS11180 PF00013 KH domain CPRO_RS11185 PF10150 Ribonuclease E/G family CPRO_RS11185 PF00575 S1 RNA binding domain CPRO_RS11195 PF01551 Peptidase family M23 CPRO_RS11205 PF03193 RsgA GTPase CPRO_RS11210 PF04463 Protein of unknown function (DUF523) CPRO_RS11220 PF12705 PD-(D/E)XK nuclease superfamily CPRO_RS11225 PF00005 ABC transporter CPRO_RS11225 PF00664 ABC transporter transmembrane region CPRO_RS11235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPRO_RS11360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPRO_RS11360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPRO_RS11365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS11365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_RS11370 PF02817 e3 binding domain CPRO_RS11370 PF00364 Biotin-requiring enzyme CPRO_RS11370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPRO_RS11375 PF02780 Transketolase, C-terminal domain CPRO_RS11375 PF02779 Transketolase, pyrimidine binding domain CPRO_RS11380 PF00676 Dehydrogenase E1 component CPRO_RS11385 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPRO_RS11395 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_RS11395 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPRO_RS11400 PF07702 UTRA domain CPRO_RS11400 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS11405 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPRO_RS11405 PF00586 AIR synthase related protein, N-terminal domain CPRO_RS11405 PF02769 AIR synthase related protein, C-terminal domain CPRO_RS11410 PF02844 Phosphoribosylglycinamide synthetase, N domain CPRO_RS11410 PF02843 Phosphoribosylglycinamide synthetase, C domain CPRO_RS11410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPRO_RS11415 PF02142 MGS-like domain CPRO_RS11415 PF01808 AICARFT/IMPCHase bienzyme CPRO_RS11420 PF00206 Lyase CPRO_RS11420 PF10397 Adenylosuccinate lyase C-terminus CPRO_RS11430 PF00551 Formyl transferase CPRO_RS11435 PF00586 AIR synthase related protein, N-terminal domain CPRO_RS11435 PF02769 AIR synthase related protein, C-terminal domain CPRO_RS11440 PF00156 Phosphoribosyl transferase domain CPRO_RS11445 PF01259 SAICAR synthetase CPRO_RS11450 PF00731 AIR carboxylase CPRO_RS11455 PF01979 Amidohydrolase family CPRO_RS11460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_RS11460 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPRO_RS11460 PF02142 MGS-like domain CPRO_RS11465 PF00175 Oxidoreductase NAD-binding domain CPRO_RS11465 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPRO_RS11470 PF01180 Dihydroorotate dehydrogenase CPRO_RS11475 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPRO_RS11480 PF00156 Phosphoribosyl transferase domain CPRO_RS11485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPRO_RS11485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPRO_RS11490 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CPRO_RS11490 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CPRO_RS11515 PF01594 AI-2E family transporter CPRO_RS11520 PF01546 Peptidase family M20/M25/M40 CPRO_RS11520 PF07687 Peptidase dimerisation domain CPRO_RS11525 PF00035 Double-stranded RNA binding motif CPRO_RS11525 PF14622 Ribonuclease-III-like CPRO_RS11530 PF00550 Phosphopantetheine attachment site CPRO_RS11545 PF00072 Response regulator receiver domain CPRO_RS11545 PF01627 Hpt domain CPRO_RS11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS11545 PF01584 CheW-like domain CPRO_RS11550 PF01515 Phosphate acetyl/butaryl transferase CPRO_RS11555 PF00871 Acetokinase family CPRO_RS11565 PF01783 Ribosomal L32p protein family CPRO_RS11570 PF02504 Fatty acid synthesis protein CPRO_RS11575 PF05636 HIGH Nucleotidyl Transferase CPRO_RS11580 PF07670 Nucleoside recognition CPRO_RS11590 PF01467 Cytidylyltransferase-like CPRO_RS11600 PF02887 Pyruvate kinase, alpha/beta domain CPRO_RS11600 PF00391 PEP-utilising enzyme, mobile domain CPRO_RS11600 PF00224 Pyruvate kinase, barrel domain CPRO_RS11605 PF00365 Phosphofructokinase CPRO_RS11610 PF02081 Tryptophan RNA-binding attenuator protein CPRO_RS11615 PF01336 OB-fold nucleic acid binding domain CPRO_RS11615 PF02811 PHP domain CPRO_RS11615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPRO_RS11615 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPRO_RS11615 PF14579 Helix-hairpin-helix motif CPRO_RS11620 PF00005 ABC transporter CPRO_RS11620 PF02687 FtsX-like permease family CPRO_RS11620 PF12704 MacB-like periplasmic core domain CPRO_RS11625 PF00005 ABC transporter CPRO_RS11630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPRO_RS11635 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPRO_RS11635 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_RS11635 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_RS11635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_RS11635 PF10371 Domain of unknown function CPRO_RS11645 PF01668 SmpB protein CPRO_RS11690 PF02086 D12 class N6 adenine-specific DNA methyltransferase CPRO_RS11830 PF11734 TilS substrate C-terminal domain CPRO_RS11830 PF09179 TilS substrate binding domain CPRO_RS11830 PF01171 PP-loop family CPRO_RS11860 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPRO_RS11860 PF18277 AbrB C-terminal domain CPRO_RS11900 PF06114 IrrE N-terminal-like domain CPRO_RS11915 PF00301 Rubredoxin CPRO_RS11925 PF00753 Metallo-beta-lactamase superfamily CPRO_RS11925 PF00301 Rubredoxin CPRO_RS11925 PF00258 Flavodoxin CPRO_RS11950 PF13186 Iron-sulfur cluster-binding domain CPRO_RS11950 PF04055 Radical SAM superfamily CPRO_RS11960 PF00313 'Cold-shock' DNA-binding domain CPRO_RS11975 PF02734 DAK2 domain CPRO_RS11975 PF13684 Dihydroxyacetone kinase family CPRO_RS11980 PF03780 Asp23 family, cell envelope-related function CPRO_RS11985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPRO_RS11990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CPRO_RS11990 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CPRO_RS11995 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_RS12090 PF01546 Peptidase family M20/M25/M40 CPRO_RS12090 PF07687 Peptidase dimerisation domain CPRO_RS12095 PF00579 tRNA synthetases class I (W and Y) CPRO_RS12100 PF01965 DJ-1/PfpI family CPRO_RS12105 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_RS12105 PF00589 Phage integrase family CPRO_RS12110 PF01944 Stage II sporulation protein M CPRO_RS12115 PF00293 NUDIX domain CPRO_RS12120 PF00155 Aminotransferase class I and II CPRO_RS12125 PF01244 Membrane dipeptidase (Peptidase family M19) CPRO_RS12130 PF00072 Response regulator receiver domain CPRO_RS12130 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_RS12135 PF17820 PDZ domain CPRO_RS12135 PF05580 SpoIVB peptidase S55 CPRO_RS12150 PF00113 Enolase, C-terminal TIM barrel domain CPRO_RS12150 PF03952 Enolase, N-terminal domain CPRO_RS12155 PF01676 Metalloenzyme superfamily CPRO_RS12155 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPRO_RS12160 PF00121 Triosephosphate isomerase CPRO_RS12170 PF00162 Phosphoglycerate kinase CPRO_RS12175 PF04198 Putative sugar-binding domain CPRO_RS12190 PF13367 PrsW family intramembrane metalloprotease CPRO_RS12195 PF02687 FtsX-like permease family CPRO_RS12195 PF12704 MacB-like periplasmic core domain CPRO_RS12205 PF00005 ABC transporter CPRO_RS12215 PF13167 GTP-binding GTPase N-terminal CPRO_RS12215 PF01926 50S ribosome-binding GTPase CPRO_RS12215 PF16360 GTP-binding GTPase Middle Region CPRO_RS12220 PF01678 Diaminopimelate epimerase CPRO_RS12225 PF04070 Domain of unknown function (DUF378) CPRO_RS12230 PF05193 Peptidase M16 inactive domain CPRO_RS12230 PF00675 Insulinase (Peptidase family M16) CPRO_RS12235 PF00575 S1 RNA binding domain CPRO_RS12235 PF00013 KH domain CPRO_RS12235 PF01138 3' exoribonuclease family, domain 1 CPRO_RS12235 PF03725 3' exoribonuclease family, domain 2 CPRO_RS12235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPRO_RS12240 PF00312 Ribosomal protein S15 CPRO_RS12250 PF01687 Riboflavin kinase CPRO_RS12250 PF06574 FAD synthetase CPRO_RS12255 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPRO_RS12255 PF16198 tRNA pseudouridylate synthase B C-terminal domain CPRO_RS12265 PF02033 Ribosome-binding factor A CPRO_RS12270 PF04760 Translation initiation factor IF-2, N-terminal region CPRO_RS12270 PF11987 Translation-initiation factor 2 CPRO_RS12270 PF00009 Elongation factor Tu GTP binding domain CPRO_RS12280 PF04296 Protein of unknown function (DUF448) CPRO_RS12285 PF00575 S1 RNA binding domain CPRO_RS12285 PF13184 NusA-like KH domain CPRO_RS12285 PF08529 NusA N-terminal domain CPRO_RS12290 PF02576 RimP N-terminal domain CPRO_RS12290 PF17384 RimP C-terminal SH3 domain CPRO_RS12295 PF04474 Protein of unknown function (DUF554) CPRO_RS12300 PF00005 ABC transporter CPRO_RS12305 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS12310 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_RS12315 PF01791 DeoC/LacD family aldolase CPRO_RS12325 PF02401 LytB protein CPRO_RS12325 PF00575 S1 RNA binding domain CPRO_RS12330 PF01553 Acyltransferase CPRO_RS12335 PF02224 Cytidylate kinase CPRO_RS12345 PF00300 Histidine phosphatase superfamily (branch 1) CPRO_RS12350 PF00849 RNA pseudouridylate synthase CPRO_RS12350 PF01479 S4 domain CPRO_RS12355 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_RS12355 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_RS12365 PF04079 Segregation and condensation complex subunit ScpB CPRO_RS12370 PF02616 Segregation and condensation protein ScpA CPRO_RS12400 PF00171 Aldehyde dehydrogenase family CPRO_RS12420 PF01472 PUA domain CPRO_RS12420 PF00696 Amino acid kinase family CPRO_RS12425 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPRO_RS12425 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CPRO_RS12435 PF00183 Hsp90 protein CPRO_RS12445 PF13722 5TM C-terminal transporter carbon starvation CstA CPRO_RS12445 PF02554 Carbon starvation protein CstA CPRO_RS12450 PF03372 Endonuclease/Exonuclease/phosphatase family CPRO_RS12460 PF00795 Carbon-nitrogen hydrolase CPRO_RS12465 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPRO_RS12470 PF00290 Tryptophan synthase alpha chain CPRO_RS12475 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS12480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CPRO_RS12485 PF00218 Indole-3-glycerol phosphate synthase CPRO_RS12490 PF00591 Glycosyl transferase family, a/b domain CPRO_RS12490 PF02885 Glycosyl transferase family, helical bundle domain CPRO_RS12495 PF00117 Glutamine amidotransferase class-I CPRO_RS12500 PF00425 chorismate binding enzyme CPRO_RS12500 PF04715 Anthranilate synthase component I, N terminal region CPRO_RS12505 PF02567 Phenazine biosynthesis-like protein CPRO_RS12510 PF00155 Aminotransferase class I and II CPRO_RS12510 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS12515 PF16916 Dimerisation domain of Zinc Transporter CPRO_RS12515 PF01545 Cation efflux family CPRO_RS12520 PF00226 DnaJ domain CPRO_RS12520 PF01556 DnaJ C terminal domain CPRO_RS12520 PF00684 DnaJ central domain CPRO_RS12525 PF00012 Hsp70 protein CPRO_RS12530 PF01025 GrpE CPRO_RS12535 PF01628 HrcA protein C terminal domain CPRO_RS12540 PF06969 HemN C-terminal domain CPRO_RS12540 PF04055 Radical SAM superfamily CPRO_RS12545 PF00884 Sulfatase CPRO_RS12550 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS12560 PF01381 Helix-turn-helix CPRO_RS12570 PF01906 Putative heavy-metal-binding CPRO_RS12585 PF05195 Aminopeptidase P, N-terminal domain CPRO_RS12585 PF00557 Metallopeptidase family M24 CPRO_RS12590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_RS12590 PF02272 DHHA1 domain CPRO_RS12590 PF01411 tRNA synthetases class II (A) CPRO_RS12595 PF02645 Uncharacterised protein, DegV family COG1307 CPRO_RS12605 PF01926 50S ribosome-binding GTPase CPRO_RS12610 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS12610 PF05362 Lon protease (S16) C-terminal proteolytic domain CPRO_RS12610 PF02190 ATP-dependent protease La (LON) substrate-binding domain CPRO_RS12615 PF05362 Lon protease (S16) C-terminal proteolytic domain CPRO_RS12615 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS12620 PF00009 Elongation factor Tu GTP binding domain CPRO_RS12620 PF03144 Elongation factor Tu domain 2 CPRO_RS12620 PF03143 Elongation factor Tu C-terminal domain CPRO_RS12625 PF03764 Elongation factor G, domain IV CPRO_RS12625 PF14492 Elongation Factor G, domain II CPRO_RS12625 PF00009 Elongation factor Tu GTP binding domain CPRO_RS12625 PF03144 Elongation factor Tu domain 2 CPRO_RS12625 PF00679 Elongation factor G C-terminus CPRO_RS12630 PF00177 Ribosomal protein S7p/S5e CPRO_RS12635 PF00164 Ribosomal protein S12/S23 CPRO_RS12640 PF00005 ABC transporter CPRO_RS12640 PF12704 MacB-like periplasmic core domain CPRO_RS12640 PF02687 FtsX-like permease family CPRO_RS12650 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS12650 PF08361 MAATS-type transcriptional repressor, C-terminal region CPRO_RS12655 PF04998 RNA polymerase Rpb1, domain 5 CPRO_RS12655 PF05000 RNA polymerase Rpb1, domain 4 CPRO_RS12655 PF04983 RNA polymerase Rpb1, domain 3 CPRO_RS12655 PF00623 RNA polymerase Rpb1, domain 2 CPRO_RS12655 PF04997 RNA polymerase Rpb1, domain 1 CPRO_RS12660 PF04561 RNA polymerase Rpb2, domain 2 CPRO_RS12660 PF04560 RNA polymerase Rpb2, domain 7 CPRO_RS12660 PF04563 RNA polymerase beta subunit CPRO_RS12660 PF10385 RNA polymerase beta subunit external 1 domain CPRO_RS12660 PF04565 RNA polymerase Rpb2, domain 3 CPRO_RS12660 PF00562 RNA polymerase Rpb2, domain 6 CPRO_RS12665 PF02677 Epoxyqueuosine reductase QueH CPRO_RS12675 PF00542 Ribosomal protein L7/L12 C-terminal domain CPRO_RS12675 PF16320 Ribosomal protein L7/L12 dimerisation domain CPRO_RS12680 PF00466 Ribosomal protein L10 CPRO_RS12685 PF00687 Ribosomal protein L1p/L10e family CPRO_RS12690 PF00298 Ribosomal protein L11, RNA binding domain CPRO_RS12690 PF03946 Ribosomal protein L11, N-terminal domain CPRO_RS12695 PF02357 Transcription termination factor nusG CPRO_RS12695 PF00467 KOW motif CPRO_RS12705 PF00471 Ribosomal protein L33 CPRO_RS12720 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPRO_RS12720 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPRO_RS12730 PF13180 PDZ domain CPRO_RS12730 PF03572 Peptidase family S41 CPRO_RS12735 PF18075 FtsX extracellular domain CPRO_RS12735 PF02687 FtsX-like permease family CPRO_RS12740 PF00005 ABC transporter CPRO_RS12745 PF07905 Purine catabolism regulatory protein-like family CPRO_RS12745 PF13556 PucR C-terminal helix-turn-helix domain CPRO_RS12745 PF17853 GGDEF-like domain CPRO_RS12750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPRO_RS12750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CPRO_RS12755 PF03808 Glycosyl transferase WecB/TagA/CpsF family CPRO_RS12775 PF13439 Glycosyltransferase Family 4 CPRO_RS12775 PF00534 Glycosyl transferases group 1 CPRO_RS12780 PF03023 Lipid II flippase MurJ CPRO_RS12795 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CPRO_RS12805 PF00485 Phosphoribulokinase / Uridine kinase family CPRO_RS12810 PF03816 Cell envelope-related transcriptional attenuator domain CPRO_RS12815 PF03816 Cell envelope-related transcriptional attenuator domain CPRO_RS12825 PF00209 Sodium:neurotransmitter symporter family CPRO_RS12830 PF00571 CBS domain CPRO_RS12830 PF03448 MgtE intracellular N domain CPRO_RS12830 PF01769 Divalent cation transporter CPRO_RS12835 PF03796 DnaB-like helicase C terminal domain CPRO_RS12835 PF00772 DnaB-like helicase N terminal domain CPRO_RS12840 PF03948 Ribosomal protein L9, C-terminal domain CPRO_RS12840 PF01281 Ribosomal protein L9, N-terminal domain CPRO_RS12845 PF02272 DHHA1 domain CPRO_RS12845 PF01368 DHH family CPRO_RS12860 PF17863 AAA lid domain CPRO_RS12860 PF07726 ATPase family associated with various cellular activities (AAA) CPRO_RS12865 PF01594 AI-2E family transporter CPRO_RS12880 PF15714 Stage V sporulation protein T C-terminal, transcription factor CPRO_RS12880 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CPRO_RS12885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPRO_RS12885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPRO_RS12890 PF02660 Glycerol-3-phosphate acyltransferase CPRO_RS12895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPRO_RS12895 PF01926 50S ribosome-binding GTPase CPRO_RS12905 PF01351 Ribonuclease HII CPRO_RS12915 PF00753 Metallo-beta-lactamase superfamily CPRO_RS12915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPRO_RS12915 PF17770 Ribonuclease J C-terminal domain CPRO_RS12925 PF03652 Holliday junction resolvase CPRO_RS12930 PF06135 IreB regulatory phosphoprotein CPRO_RS12935 PF00919 Uncharacterized protein family UPF0004 CPRO_RS12935 PF04055 Radical SAM superfamily CPRO_RS12935 PF01938 TRAM domain CPRO_RS12955 PF01048 Phosphorylase superfamily CPRO_RS12960 PF07722 Peptidase C26 CPRO_RS12965 PF00924 Mechanosensitive ion channel CPRO_RS12985 PF00403 Heavy-metal-associated domain CPRO_RS12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS12995 PF03466 LysR substrate binding domain CPRO_RS13010 PF00271 Helicase conserved C-terminal domain CPRO_RS13010 PF03461 TRCF domain CPRO_RS13010 PF17757 UvrB interaction domain CPRO_RS13010 PF02559 CarD-like/TRCF domain CPRO_RS13010 PF00270 DEAD/DEAH box helicase CPRO_RS13015 PF01195 Peptidyl-tRNA hydrolase CPRO_RS13020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPRO_RS13020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPRO_RS13025 PF14572 Phosphoribosyl synthetase-associated domain CPRO_RS13025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPRO_RS13030 PF12804 MobA-like NTP transferase domain CPRO_RS13030 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_RS13035 PF00483 Nucleotidyl transferase CPRO_RS13040 PF00483 Nucleotidyl transferase CPRO_RS13045 PF01225 Mur ligase family, catalytic domain CPRO_RS13045 PF08245 Mur ligase middle domain CPRO_RS13045 PF02875 Mur ligase family, glutamate ligase domain CPRO_RS13050 PF02590 Predicted SPOUT methyltransferase CPRO_RS13055 PF00753 Metallo-beta-lactamase superfamily CPRO_RS13060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_RS13085 PF13426 PAS domain CPRO_RS13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS13085 PF00672 HAMP domain CPRO_RS13085 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS13090 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS13090 PF00072 Response regulator receiver domain CPRO_RS13095 PF00072 Response regulator receiver domain CPRO_RS13095 PF09308 LuxQ, periplasmic CPRO_RS13095 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS13100 PF01869 BadF/BadG/BcrA/BcrD ATPase family CPRO_RS13110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPRO_RS13115 PF05175 Methyltransferase small domain CPRO_RS13120 PF04468 PSP1 C-terminal conserved region CPRO_RS13125 PF12169 DNA polymerase III subunits gamma and tau domain III CPRO_RS13130 PF06153 Cyclic-di-AMP receptor CPRO_RS13135 PF02223 Thymidylate kinase CPRO_RS13145 PF00308 Bacterial dnaA protein CPRO_RS13145 PF08299 Bacterial dnaA protein helix-turn-helix CPRO_RS13145 PF11638 DnaA N-terminal domain CPRO_RS13155 PF00953 Glycosyl transferase family 4 CPRO_RS13165 PF02502 Ribose/Galactose Isomerase CPRO_RS13170 PF03481 Putative GTP-binding controlling metal-binding CPRO_RS13170 PF01300 Telomere recombination CPRO_RS13175 PF07517 SecA DEAD-like domain CPRO_RS13175 PF02810 SEC-C motif CPRO_RS13175 PF07516 SecA Wing and Scaffold domain CPRO_RS13175 PF01043 SecA preprotein cross-linking domain CPRO_RS13190 PF00117 Glutamine amidotransferase class-I CPRO_RS13190 PF06418 CTP synthase N-terminus CPRO_RS13200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPRO_RS13205 PF04101 Glycosyltransferase family 28 C-terminal domain CPRO_RS13205 PF03033 Glycosyltransferase family 28 N-terminal domain CPRO_RS13215 PF01230 HIT domain CPRO_RS13230 PF13091 PLD-like domain CPRO_RS13230 PF13396 Phospholipase_D-nuclease N-terminal CPRO_RS13240 PF03073 TspO/MBR family CPRO_RS13245 PF00962 Adenosine/AMP deaminase CPRO_RS13250 PF08903 Domain of unknown function (DUF1846) CPRO_RS13255 PF00156 Phosphoribosyl transferase domain CPRO_RS13260 PF14490 Helix-hairpin-helix containing domain CPRO_RS13260 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CPRO_RS13260 PF13538 UvrD-like helicase C-terminal domain CPRO_RS13265 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPRO_RS13265 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPRO_RS13265 PF02772 S-adenosylmethionine synthetase, central domain CPRO_RS13280 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPRO_RS13280 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPRO_RS13280 PF18357 Diphteria toxin repressor SH3 domain CPRO_RS13290 PF00990 Diguanylate cyclase, GGDEF domain CPRO_RS13290 PF03707 Bacterial signalling protein N terminal repeat CPRO_RS13290 PF00563 EAL domain CPRO_RS13300 PF02678 Pirin CPRO_RS13300 PF05726 Pirin C-terminal cupin domain CPRO_RS13305 PF12802 MarR family CPRO_RS13310 PF13739 Deacetylase PdaC CPRO_RS13310 PF11738 Protein of unknown function (DUF3298) CPRO_RS13310 PF01522 Polysaccharide deacetylase CPRO_RS13320 PF12838 4Fe-4S dicluster domain CPRO_RS13325 PF04607 Region found in RelA / SpoT proteins CPRO_RS13325 PF13291 ACT domain CPRO_RS13325 PF02824 TGS domain CPRO_RS13335 PF00860 Permease family CPRO_RS13345 PF01207 Dihydrouridine synthase (Dus) CPRO_RS13350 PF03309 Type III pantothenate kinase CPRO_RS13355 PF03309 Type III pantothenate kinase CPRO_RS13370 PF02237 Biotin protein ligase C terminal domain CPRO_RS13370 PF03099 Biotin/lipoate A/B protein ligase family CPRO_RS13370 PF08279 HTH domain CPRO_RS13380 PF01434 Peptidase family M41 CPRO_RS13380 PF06480 FtsH Extracellular CPRO_RS13380 PF17862 AAA+ lid domain CPRO_RS13380 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS13385 PF00156 Phosphoribosyl transferase domain CPRO_RS13390 PF01171 PP-loop family CPRO_RS13390 PF11734 TilS substrate C-terminal domain CPRO_RS13410 PF00258 Flavodoxin CPRO_RS13410 PF00753 Metallo-beta-lactamase superfamily CPRO_RS13410 PF00301 Rubredoxin CPRO_RS13415 PF00342 Phosphoglucose isomerase CPRO_RS13425 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS13425 PF07729 FCD domain CPRO_RS13430 PF00288 GHMP kinases N terminal domain CPRO_RS13430 PF08544 GHMP kinases C terminal CPRO_RS13435 PF01872 RibD C-terminal domain CPRO_RS13435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPRO_RS13440 PF00677 Lumazine binding domain CPRO_RS13445 PF00925 GTP cyclohydrolase II CPRO_RS13445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPRO_RS13450 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPRO_RS13455 PF01594 AI-2E family transporter CPRO_RS13465 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_RS13470 PF00557 Metallopeptidase family M24 CPRO_RS13475 PF12832 MFS_1 like family CPRO_RS13480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPRO_RS13480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPRO_RS13485 PF13426 PAS domain CPRO_RS13485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_RS13485 PF08447 PAS fold CPRO_RS13665 PF00589 Phage integrase family CPRO_RS13665 PF13495 Phage integrase, N-terminal SAM-like domain CPRO_RS13675 PF03956 Lysine exporter LysO CPRO_RS13685 PF01212 Beta-eliminating lyase CPRO_RS13690 PF00005 ABC transporter CPRO_RS13690 PF12848 ABC transporter CPRO_RS13700 PF00899 ThiF family CPRO_RS13710 PF00465 Iron-containing alcohol dehydrogenase CPRO_RS13715 PF00766 Electron transfer flavoprotein FAD-binding domain CPRO_RS13715 PF01012 Electron transfer flavoprotein domain CPRO_RS13720 PF01012 Electron transfer flavoprotein domain CPRO_RS13725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPRO_RS13725 PF02770 Acyl-CoA dehydrogenase, middle domain CPRO_RS13725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPRO_RS13730 PF03610 PTS system fructose IIA component CPRO_RS13730 PF00158 Sigma-54 interaction domain CPRO_RS13730 PF00874 PRD domain CPRO_RS13735 PF03772 Competence protein CPRO_RS13735 PF13567 Domain of unknown function (DUF4131) CPRO_RS13735 PF00753 Metallo-beta-lactamase superfamily CPRO_RS13740 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS13740 PF01434 Peptidase family M41 CPRO_RS13740 PF17862 AAA+ lid domain CPRO_RS13740 PF06480 FtsH Extracellular CPRO_RS13750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_RS13760 PF01741 Large-conductance mechanosensitive channel, MscL CPRO_RS13765 PF00005 ABC transporter CPRO_RS13785 PF02465 Flagellar hook-associated protein 2 N-terminus CPRO_RS13785 PF07195 Flagellar hook-associated protein 2 C-terminus CPRO_RS13790 PF13614 AAA domain CPRO_RS13800 PF00072 Response regulator receiver domain CPRO_RS13800 PF01584 CheW-like domain CPRO_RS13805 PF03975 CheD chemotactic sensory transduction CPRO_RS13810 PF04509 CheC-like family CPRO_RS13815 PF00460 Flagella basal body rod protein CPRO_RS13815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_RS13820 PF00460 Flagella basal body rod protein CPRO_RS13820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_RS13825 PF04545 Sigma-70, region 4 CPRO_RS13825 PF04539 Sigma-70 region 3 CPRO_RS13825 PF04542 Sigma-70 region 2 CPRO_RS13830 PF00771 FHIPEP family CPRO_RS13835 PF01312 FlhB HrpN YscU SpaS Family CPRO_RS13840 PF01311 Bacterial export proteins, family 1 CPRO_RS13845 PF01313 Bacterial export proteins, family 3 CPRO_RS13850 PF00813 FliP family CPRO_RS13860 PF00072 Response regulator receiver domain CPRO_RS13865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPRO_RS13865 PF04509 CheC-like family CPRO_RS13875 PF00691 OmpA family CPRO_RS13875 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPRO_RS13880 PF01618 MotA/TolQ/ExbB proton channel family CPRO_RS13890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_RS13890 PF00460 Flagella basal body rod protein CPRO_RS13910 PF00395 S-layer homology domain CPRO_RS13910 PF00963 Cohesin domain CPRO_RS13920 PF01312 FlhB HrpN YscU SpaS Family CPRO_RS13930 PF09078 CheY binding CPRO_RS13930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS13930 PF02895 Signal transducing histidine kinase, homodimeric domain CPRO_RS13930 PF01584 CheW-like domain CPRO_RS13930 PF01627 Hpt domain CPRO_RS13935 PF01584 CheW-like domain CPRO_RS13940 PF03705 CheR methyltransferase, all-alpha domain CPRO_RS13940 PF01739 CheR methyltransferase, SAM binding domain CPRO_RS13945 PF01339 CheB methylesterase CPRO_RS13945 PF00072 Response regulator receiver domain CPRO_RS13950 PF04316 Anti-sigma-28 factor, FlgM CPRO_RS13975 PF02623 FliW protein CPRO_RS13980 PF02599 Global regulator protein family CPRO_RS13990 PF00005 ABC transporter CPRO_RS13995 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS14000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_RS14010 PF10502 Signal peptidase, peptidase S26 CPRO_RS14065 PF00343 Carbohydrate phosphorylase CPRO_RS14085 PF03462 PCRF domain CPRO_RS14085 PF00472 RF-1 domain CPRO_RS14090 PF05175 Methyltransferase small domain CPRO_RS14090 PF17827 PrmC N-terminal domain CPRO_RS14095 PF07136 Protein of unknown function (DUF1385) CPRO_RS14100 PF01197 Ribosomal protein L31 CPRO_RS14105 PF07498 Rho termination factor, N-terminal domain CPRO_RS14105 PF07497 Rho termination factor, RNA-binding domain CPRO_RS14105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_RS14130 PF03030 Inorganic H+ pyrophosphatase CPRO_RS14140 PF01569 PAP2 superfamily CPRO_RS14145 PF02659 Putative manganese efflux pump CPRO_RS14180 PF01479 S4 domain CPRO_RS14185 PF00216 Bacterial DNA-binding protein CPRO_RS14190 PF03819 MazG nucleotide pyrophosphohydrolase domain CPRO_RS14195 PF00175 Oxidoreductase NAD-binding domain CPRO_RS14195 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPRO_RS14200 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS14200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPRO_RS14200 PF13247 4Fe-4S dicluster domain CPRO_RS14205 PF00753 Metallo-beta-lactamase superfamily CPRO_RS14210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPRO_RS14210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPRO_RS14225 PF00692 dUTPase CPRO_RS14230 PF04294 VanW like protein CPRO_RS14235 PF03180 NLPA lipoprotein CPRO_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS14245 PF09383 NIL domain CPRO_RS14245 PF00005 ABC transporter CPRO_RS14250 PF03816 Cell envelope-related transcriptional attenuator domain CPRO_RS14255 PF08543 Phosphomethylpyrimidine kinase CPRO_RS14255 PF02581 Thiamine monophosphate synthase CPRO_RS14275 PF00271 Helicase conserved C-terminal domain CPRO_RS14275 PF00270 DEAD/DEAH box helicase CPRO_RS14280 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_RS14280 PF08239 Bacterial SH3 domain CPRO_RS14285 PF00266 Aminotransferase class-V CPRO_RS14290 PF01842 ACT domain CPRO_RS14290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPRO_RS14290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPRO_RS14305 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPRO_RS14310 PF00764 Arginosuccinate synthase CPRO_RS14315 PF00206 Lyase CPRO_RS14315 PF14698 Argininosuccinate lyase C-terminal CPRO_RS14335 PF13419 Haloacid dehalogenase-like hydrolase CPRO_RS14345 PF00155 Aminotransferase class I and II CPRO_RS14350 PF00155 Aminotransferase class I and II CPRO_RS14355 PF07883 Cupin domain CPRO_RS14355 PF01381 Helix-turn-helix CPRO_RS14360 PF08402 TOBE domain CPRO_RS14360 PF00005 ABC transporter CPRO_RS14365 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS14395 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_RS14395 PF06480 FtsH Extracellular CPRO_RS14395 PF17862 AAA+ lid domain CPRO_RS14395 PF01434 Peptidase family M41 CPRO_RS14405 PF01925 Sulfite exporter TauE/SafE CPRO_RS14410 PF01276 Orn/Lys/Arg decarboxylase, major domain CPRO_RS14410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPRO_RS14425 PF00392 Bacterial regulatory proteins, gntR family CPRO_RS14425 PF07729 FCD domain CPRO_RS14430 PF00005 ABC transporter CPRO_RS14430 PF00571 CBS domain CPRO_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS14440 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_RS14445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CPRO_RS14455 PF02535 ZIP Zinc transporter CPRO_RS14460 PF08361 MAATS-type transcriptional repressor, C-terminal region CPRO_RS14460 PF00440 Bacterial regulatory proteins, tetR family CPRO_RS14465 PF03466 LysR substrate binding domain CPRO_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_RS14470 PF03601 Conserved hypothetical protein 698 CPRO_RS14490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPRO_RS14490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPRO_RS14490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPRO_RS14490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPRO_RS14500 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPRO_RS14505 PF01336 OB-fold nucleic acid binding domain CPRO_RS14505 PF00152 tRNA synthetases class II (D, K and N) CPRO_RS14510 PF03449 Transcription elongation factor, N-terminal CPRO_RS14510 PF01272 Transcription elongation factor, GreA/GreB, C-term CPRO_RS14520 PF10371 Domain of unknown function CPRO_RS14520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_RS14520 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_RS14520 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_RS14520 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPRO_RS14535 PF07883 Cupin domain CPRO_RS14540 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPRO_RS14540 PF03807 NADP oxidoreductase coenzyme F420-dependent CPRO_RS14545 PF03960 ArsC family CPRO_RS14560 PF03167 Uracil DNA glycosylase superfamily CPRO_RS14565 PF01694 Rhomboid family CPRO_RS14585 PF14602 Hexapeptide repeat of succinyl-transferase CPRO_RS14585 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_RS14585 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CPRO_RS14590 PF01546 Peptidase family M20/M25/M40 CPRO_RS14590 PF07687 Peptidase dimerisation domain CPRO_RS14605 PF00873 AcrB/AcrD/AcrF family CPRO_RS14650 PF00512 His Kinase A (phospho-acceptor) domain CPRO_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_RS14655 PF00486 Transcriptional regulatory protein, C terminal CPRO_RS14655 PF00072 Response regulator receiver domain CPRO_RS14710 PF17762 HTH domain found in ParB protein CPRO_RS14710 PF02195 ParB-like nuclease domain CPRO_RS14715 PF02527 rRNA small subunit methyltransferase G CPRO_RS14725 PF01134 Glucose inhibited division protein A CPRO_RS14725 PF13932 GidA associated domain CPRO_RS14730 PF10396 GTP-binding protein TrmE N-terminus CPRO_RS14730 PF12631 MnmE helical domain CPRO_RS14730 PF01926 50S ribosome-binding GTPase CPRO_RS14735 PF01424 R3H domain CPRO_RS14735 PF14804 Jag N-terminus CPRO_RS14740 PF02096 60Kd inner membrane protein CPRO_RS14745 PF01809 Putative membrane protein insertion efficiency factor CPRO_RS14750 PF00825 Ribonuclease P CPRO_RS14755 PF00468 Ribosomal protein L34 CPRO_RS14760 PF00072 Response regulator receiver domain CPRO_RS14785 PF05067 Manganese containing catalase CPRO_RS14800 PF00027 Cyclic nucleotide-binding domain CPRO_RS14800 PF00520 Ion transport protein CPRO_RS14845 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_RS14855 PF17726 Dam-replacing HTH domain CPRO_RS14855 PF06044 Dam-replacing family CPRO_RS14865 PF06452 Carbohydrate family 9 binding domain-like CPRO_RS14865 PF02018 Carbohydrate binding domain CPRO_RS14865 PF00331 Glycosyl hydrolase family 10 CPRO_RS14865 PF00395 S-layer homology domain CPRO_RS14870 PF14659 Phage integrase, N-terminal SAM-like domain CPRO_RS14870 PF00589 Phage integrase family CPRO_RS14915 PF04324 BFD-like [2Fe-2S] binding domain CPRO_RS14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_RS14970 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_RS14970 PF00589 Phage integrase family CPRO_RS14990 PF00145 C-5 cytosine-specific DNA methylase CPRO_RS14995 PF00145 C-5 cytosine-specific DNA methylase CPRO_RS15005 PF06452 Carbohydrate family 9 binding domain-like CPRO_RS15005 PF02018 Carbohydrate binding domain CPRO_RS15005 PF00331 Glycosyl hydrolase family 10 CPRO_RS15005 PF00395 S-layer homology domain CPRO_RS15030 PF00448 SRP54-type protein, GTPase domain CPRO_RS15030 PF02881 SRP54-type protein, helical bundle domain CPRO_RS15070 PF03033 Glycosyltransferase family 28 N-terminal domain CPRO_RS15070 PF04101 Glycosyltransferase family 28 C-terminal domain CPRO_RS15105 PF02350 UDP-N-acetylglucosamine 2-epimerase