locus-tag class description NQ528_RS00005 PF00308 Bacterial dnaA protein NQ528_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NQ528_RS00005 PF11638 DnaA N-terminal domain NQ528_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NQ528_RS00010 PF02767 DNA polymerase III beta subunit, central domain NQ528_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NQ528_RS00020 PF02463 RecF/RecN/SMC N terminal domain NQ528_RS00025 PF04025 Domain of unknown function (DUF370) NQ528_RS00030 PF00204 DNA gyrase B NQ528_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus NQ528_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS00030 PF01751 Toprim domain NQ528_RS00045 PF03989 DNA gyrase C-terminal domain, beta-propeller NQ528_RS00045 PF00521 DNA gyrase/topoisomerase IV, subunit A NQ528_RS00055 PF02690 Na+/Pi-cotransporter NQ528_RS00060 PF01476 LysM domain NQ528_RS00060 PF00246 Zinc carboxypeptidase NQ528_RS00065 PF00293 NUDIX domain NQ528_RS00070 PF01522 Polysaccharide deacetylase NQ528_RS00075 PF03180 NLPA lipoprotein NQ528_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS00085 PF00005 ABC transporter NQ528_RS00085 PF09383 NIL domain NQ528_RS00090 PF04073 Aminoacyl-tRNA editing domain NQ528_RS00100 PF00270 DEAD/DEAH box helicase NQ528_RS00100 PF00271 Helicase conserved C-terminal domain NQ528_RS00105 PF02464 Competence-damaged protein NQ528_RS00105 PF18146 Damage-inducible protein CinA KH domain NQ528_RS00105 PF00994 Probable molybdopterin binding domain NQ528_RS00115 PF02664 S-Ribosylhomocysteinase (LuxS) NQ528_RS00130 PF02146 Sir2 family NQ528_RS00140 PF06874 Firmicute fructose-1,6-bisphosphatase NQ528_RS00145 PF00709 Adenylosuccinate synthetase NQ528_RS00150 PF02885 Glycosyl transferase family, helical bundle domain NQ528_RS00150 PF00591 Glycosyl transferase family, a/b domain NQ528_RS00150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NQ528_RS00155 PF01676 Metalloenzyme superfamily NQ528_RS00170 PF14437 MafB19-like deaminase NQ528_RS00185 PF03591 AzlC protein NQ528_RS00190 PF05437 Branched-chain amino acid transport protein (AzlD) NQ528_RS00195 PF00583 Acetyltransferase (GNAT) family NQ528_RS00200 PF03372 Endonuclease/Exonuclease/phosphatase family NQ528_RS00205 PF01734 Patatin-like phospholipase NQ528_RS00205 PF00027 Cyclic nucleotide-binding domain NQ528_RS00210 PF08546 Ketopantoate reductase PanE/ApbA C terminal NQ528_RS00210 PF02558 Ketopantoate reductase PanE/ApbA NQ528_RS00215 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NQ528_RS00220 PF07451 Stage V sporulation protein AD (SpoVAD) NQ528_RS00225 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NQ528_RS00240 PF02915 Rubrerythrin NQ528_RS00245 PF00106 short chain dehydrogenase NQ528_RS00255 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS00260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_RS00260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_RS00270 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS00280 PF00005 ABC transporter NQ528_RS00280 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS00285 PF00005 ABC transporter NQ528_RS00290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQ528_RS00295 PF02633 Creatinine amidohydrolase NQ528_RS00300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_RS00300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_RS00305 PF01180 Dihydroorotate dehydrogenase NQ528_RS00310 PF02615 Malate/L-lactate dehydrogenase NQ528_RS00315 PF00294 pfkB family carbohydrate kinase NQ528_RS00320 PF01081 KDPG and KHG aldolase NQ528_RS00335 PF01979 Amidohydrolase family NQ528_RS00340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQ528_RS00350 PF02378 Phosphotransferase system, EIIC NQ528_RS00350 PF00367 phosphotransferase system, EIIB NQ528_RS00365 PF00381 PTS HPr component phosphorylation site NQ528_RS00370 PF05524 PEP-utilising enzyme, N-terminal NQ528_RS00370 PF00391 PEP-utilising enzyme, mobile domain NQ528_RS00370 PF02896 PEP-utilising enzyme, TIM barrel domain NQ528_RS00375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NQ528_RS00375 PF00367 phosphotransferase system, EIIB NQ528_RS00375 PF02378 Phosphotransferase system, EIIC NQ528_RS00380 PF00874 PRD domain NQ528_RS00380 PF03123 CAT RNA binding domain NQ528_RS00385 PF12116 Stage III sporulation protein D NQ528_RS00405 PF00248 Aldo/keto reductase family NQ528_RS00410 PF17910 FeoB cytosolic helical domain NQ528_RS00410 PF07664 Ferrous iron transport protein B C terminus NQ528_RS00410 PF07670 Nucleoside recognition NQ528_RS00410 PF02421 Ferrous iron transport protein B NQ528_RS00410 PF04023 FeoA domain NQ528_RS00420 PF02645 Uncharacterised protein, DegV family COG1307 NQ528_RS00430 PF00892 EamA-like transporter family NQ528_RS00435 PF03807 NADP oxidoreductase coenzyme F420-dependent NQ528_RS00435 PF14748 Pyrroline-5-carboxylate reductase dimerisation NQ528_RS00440 PF01321 Creatinase/Prolidase N-terminal domain NQ528_RS00440 PF00557 Metallopeptidase family M24 NQ528_RS00445 PF00005 ABC transporter NQ528_RS00445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS00450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS00450 PF00005 ABC transporter NQ528_RS00455 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_RS00455 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS00460 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS00470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_RS00475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS00495 PF01541 GIY-YIG catalytic domain NQ528_RS00530 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NQ528_RS00530 PF01676 Metalloenzyme superfamily NQ528_RS00535 PF00121 Triosephosphate isomerase NQ528_RS00540 PF00162 Phosphoglycerate kinase NQ528_RS00545 PF02645 Uncharacterised protein, DegV family COG1307 NQ528_RS00550 PF00588 SpoU rRNA Methylase family NQ528_RS00645 PF01649 Ribosomal protein S20 NQ528_RS00660 PF01569 PAP2 superfamily NQ528_RS00665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQ528_RS00665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQ528_RS00665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQ528_RS00665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQ528_RS00670 PF03129 Anticodon binding domain NQ528_RS00670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_RS00710 PF18766 SWI2/SNF2 ATPase NQ528_RS00710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQ528_RS00710 PF11867 Domain of unknown function (DUF3387) NQ528_RS00760 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_RS00760 PF00589 Phage integrase family NQ528_RS00800 PF13635 Domain of unknown function (DUF4143) NQ528_RS00800 PF13173 AAA domain NQ528_RS00805 PF00589 Phage integrase family NQ528_RS00805 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_RS00810 PF00589 Phage integrase family NQ528_RS00810 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_RS00870 PF01580 FtsK/SpoIIIE family NQ528_RS00870 PF09397 Ftsk gamma domain NQ528_RS00870 PF17854 FtsK alpha domain NQ528_RS00870 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NQ528_RS00935 PF02195 ParB-like nuclease domain NQ528_RS00940 PF11922 Domain of unknown function (DUF3440) NQ528_RS00940 PF01507 Phosphoadenosine phosphosulfate reductase family NQ528_RS00945 PF00672 HAMP domain NQ528_RS00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS00945 PF02203 Tar ligand binding domain homologue NQ528_RS00960 PF01381 Helix-turn-helix NQ528_RS00970 PF01872 RibD C-terminal domain NQ528_RS00990 PF02086 D12 class N6 adenine-specific DNA methyltransferase NQ528_RS00995 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01000 PF00005 ABC transporter NQ528_RS01005 PF13407 Periplasmic binding protein domain NQ528_RS01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS01015 PF01261 Xylose isomerase-like TIM barrel NQ528_RS01020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_RS01020 PF02779 Transketolase, pyrimidine binding domain NQ528_RS01020 PF02780 Transketolase, C-terminal domain NQ528_RS01025 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_RS01030 PF00455 DeoR C terminal sensor domain NQ528_RS01030 PF08220 DeoR-like helix-turn-helix domain NQ528_RS01035 PF01791 DeoC/LacD family aldolase NQ528_RS01040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_RS01045 PF13722 5TM C-terminal transporter carbon starvation CstA NQ528_RS01045 PF02554 Carbon starvation protein CstA NQ528_RS01050 PF03883 Peroxide stress protein YaaA NQ528_RS01075 PF13361 UvrD-like helicase C-terminal domain NQ528_RS01075 PF00580 UvrD/REP helicase N-terminal domain NQ528_RS01080 PF00580 UvrD/REP helicase N-terminal domain NQ528_RS01080 PF13361 UvrD-like helicase C-terminal domain NQ528_RS01095 PF00664 ABC transporter transmembrane region NQ528_RS01095 PF00005 ABC transporter NQ528_RS01100 PF00664 ABC transporter transmembrane region NQ528_RS01100 PF00005 ABC transporter NQ528_RS01105 PF00072 Response regulator receiver domain NQ528_RS01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS01115 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS01115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQ528_RS01115 PF00072 Response regulator receiver domain NQ528_RS01115 PF01627 Hpt domain NQ528_RS01115 PF00672 HAMP domain NQ528_RS01125 PF08220 DeoR-like helix-turn-helix domain NQ528_RS01125 PF00455 DeoR C terminal sensor domain NQ528_RS01130 PF01053 Cys/Met metabolism PLP-dependent enzyme NQ528_RS01135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_RS01140 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS01145 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_RS01145 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS01150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS01150 PF00005 ABC transporter NQ528_RS01155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS01155 PF00005 ABC transporter NQ528_RS01160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS01160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS01175 PF03466 LysR substrate binding domain NQ528_RS01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS01185 PF13247 4Fe-4S dicluster domain NQ528_RS01190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQ528_RS01190 PF00384 Molybdopterin oxidoreductase NQ528_RS01190 PF01568 Molydopterin dinucleotide binding domain NQ528_RS01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS01195 PF18113 Rubredoxin binding C-terminal domain NQ528_RS01220 PF05651 Putative sugar diacid recognition NQ528_RS01220 PF17853 GGDEF-like domain NQ528_RS01220 PF13556 PucR C-terminal helix-turn-helix domain NQ528_RS01225 PF10503 Esterase PHB depolymerase NQ528_RS01230 PF02447 GntP family permease NQ528_RS01240 PF02595 Glycerate kinase family NQ528_RS01245 PF03190 Protein of unknown function, DUF255 NQ528_RS01250 PF04055 Radical SAM superfamily NQ528_RS01250 PF13186 Iron-sulfur cluster-binding domain NQ528_RS01255 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS01260 PF16347 Domain of unknown function (DUF4976) NQ528_RS01260 PF00884 Sulfatase NQ528_RS01265 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_RS01285 PF02417 Chromate transporter NQ528_RS01300 PF12849 PBP superfamily domain NQ528_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS01315 PF00005 ABC transporter NQ528_RS01320 PF01895 PhoU domain NQ528_RS01325 PF00072 Response regulator receiver domain NQ528_RS01325 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS01330 PF16736 Single Cache-like NQ528_RS01330 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS01330 PF00989 PAS fold NQ528_RS01345 PF00580 UvrD/REP helicase N-terminal domain NQ528_RS01345 PF13361 UvrD-like helicase C-terminal domain NQ528_RS01350 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01355 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01360 PF00005 ABC transporter NQ528_RS01365 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_RS01370 PF00156 Phosphoribosyl transferase domain NQ528_RS01380 PF13193 AMP-binding enzyme C-terminal domain NQ528_RS01380 PF00501 AMP-binding enzyme NQ528_RS01385 PF02576 RimP N-terminal domain NQ528_RS01385 PF17384 RimP C-terminal SH3 domain NQ528_RS01390 PF00575 S1 RNA binding domain NQ528_RS01390 PF08529 NusA N-terminal domain NQ528_RS01390 PF13184 NusA-like KH domain NQ528_RS01395 PF04296 Protein of unknown function (DUF448) NQ528_RS01405 PF11987 Translation-initiation factor 2 NQ528_RS01405 PF00009 Elongation factor Tu GTP binding domain NQ528_RS01405 PF04760 Translation initiation factor IF-2, N-terminal region NQ528_RS01410 PF02033 Ribosome-binding factor A NQ528_RS01415 PF02272 DHHA1 domain NQ528_RS01415 PF01368 DHH family NQ528_RS01420 PF09157 Pseudouridine synthase II TruB, C-terminal NQ528_RS01420 PF16198 tRNA pseudouridylate synthase B C-terminal domain NQ528_RS01420 PF01509 TruB family pseudouridylate synthase (N terminal domain) NQ528_RS01425 PF06574 FAD synthetase NQ528_RS01425 PF01687 Riboflavin kinase NQ528_RS01430 PF00312 Ribosomal protein S15 NQ528_RS01435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NQ528_RS01435 PF00575 S1 RNA binding domain NQ528_RS01435 PF03725 3' exoribonuclease family, domain 2 NQ528_RS01435 PF00013 KH domain NQ528_RS01435 PF01138 3' exoribonuclease family, domain 1 NQ528_RS01440 PF01595 Cyclin M transmembrane N-terminal domain NQ528_RS01440 PF00571 CBS domain NQ528_RS01440 PF03471 Transporter associated domain NQ528_RS01445 PF00696 Amino acid kinase family NQ528_RS01450 PF00171 Aldehyde dehydrogenase family NQ528_RS01460 PF00480 ROK family NQ528_RS01465 PF00480 ROK family NQ528_RS01470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_RS01470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_RS01480 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01485 PF13407 Periplasmic binding protein domain NQ528_RS01490 PF00005 ABC transporter NQ528_RS01500 PF00285 Citrate synthase, C-terminal domain NQ528_RS01505 PF08486 Stage II sporulation protein NQ528_RS01520 PF00155 Aminotransferase class I and II NQ528_RS01530 PF02386 Cation transport protein NQ528_RS01535 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS01540 PF01180 Dihydroorotate dehydrogenase NQ528_RS01545 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS01550 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NQ528_RS01555 PF07969 Amidohydrolase family NQ528_RS01580 PF09962 Uncharacterized conserved protein (DUF2196) NQ528_RS01585 PF03960 ArsC family NQ528_RS01590 PF02272 DHHA1 domain NQ528_RS01590 PF01411 tRNA synthetases class II (A) NQ528_RS01590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQ528_RS01605 PF13411 MerR HTH family regulatory protein NQ528_RS01605 PF06445 GyrI-like small molecule binding domain NQ528_RS01620 PF01212 Beta-eliminating lyase NQ528_RS01630 PF07969 Amidohydrolase family NQ528_RS01640 PF00005 ABC transporter NQ528_RS01640 PF08402 TOBE domain NQ528_RS01645 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS01650 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS01655 PF13416 Bacterial extracellular solute-binding protein NQ528_RS01665 PF08446 PAS fold NQ528_RS01665 PF01590 GAF domain NQ528_RS01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS01665 PF00360 Phytochrome region NQ528_RS01675 PF00037 4Fe-4S binding domain NQ528_RS01675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQ528_RS01675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NQ528_RS01680 PF00037 4Fe-4S binding domain NQ528_RS01680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NQ528_RS01680 PF02906 Iron only hydrogenase large subunit, C-terminal domain NQ528_RS01680 PF02256 Iron hydrogenase small subunit NQ528_RS01685 PF02780 Transketolase, C-terminal domain NQ528_RS01685 PF02779 Transketolase, pyrimidine binding domain NQ528_RS01685 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_RS01690 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_RS01720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS01720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS01725 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_RS01725 PF00107 Zinc-binding dehydrogenase NQ528_RS01730 PF13407 Periplasmic binding protein domain NQ528_RS01735 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01740 PF00005 ABC transporter NQ528_RS01745 PF00480 ROK family NQ528_RS01755 PF00795 Carbon-nitrogen hydrolase NQ528_RS01755 PF02540 NAD synthase NQ528_RS01760 PF04552 Sigma-54, DNA binding domain NQ528_RS01760 PF04963 Sigma-54 factor, core binding domain NQ528_RS01760 PF00309 Sigma-54 factor, Activator interacting domain (AID) NQ528_RS01775 PF01565 FAD binding domain NQ528_RS01775 PF02913 FAD linked oxidases, C-terminal domain NQ528_RS01780 PF00766 Electron transfer flavoprotein FAD-binding domain NQ528_RS01780 PF01012 Electron transfer flavoprotein domain NQ528_RS01785 PF01012 Electron transfer flavoprotein domain NQ528_RS01790 PF01557 Fumarylacetoacetate (FAA) hydrolase family NQ528_RS01795 PF00005 ABC transporter NQ528_RS01800 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS01800 PF00005 ABC transporter NQ528_RS01805 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01805 PF11862 Domain of unknown function (DUF3382) NQ528_RS01810 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS01815 PF13458 Periplasmic binding protein NQ528_RS01820 PF00701 Dihydrodipicolinate synthetase family NQ528_RS01830 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS01835 PF07729 FCD domain NQ528_RS01835 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS01845 PF00672 HAMP domain NQ528_RS01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS01845 PF02203 Tar ligand binding domain homologue NQ528_RS01875 PF00085 Thioredoxin NQ528_RS01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS01880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQ528_RS01885 PF00106 short chain dehydrogenase NQ528_RS01890 PF00440 Bacterial regulatory proteins, tetR family NQ528_RS01895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQ528_RS01895 PF00072 Response regulator receiver domain NQ528_RS01895 PF01627 Hpt domain NQ528_RS01895 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS01895 PF00672 HAMP domain NQ528_RS01900 PF00072 Response regulator receiver domain NQ528_RS01905 PF00113 Enolase, C-terminal TIM barrel domain NQ528_RS01905 PF03952 Enolase, N-terminal domain NQ528_RS01910 PF00258 Flavodoxin NQ528_RS01930 PF02421 Ferrous iron transport protein B NQ528_RS01930 PF07664 Ferrous iron transport protein B C terminus NQ528_RS01930 PF17910 FeoB cytosolic helical domain NQ528_RS01930 PF07670 Nucleoside recognition NQ528_RS01950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_RS01955 PF06180 Cobalt chelatase (CbiK) NQ528_RS01970 PF03772 Competence protein NQ528_RS01970 PF13567 Domain of unknown function (DUF4131) NQ528_RS01970 PF00753 Metallo-beta-lactamase superfamily NQ528_RS01975 PF16363 GDP-mannose 4,6 dehydratase NQ528_RS01980 PF13091 PLD-like domain NQ528_RS01985 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS01985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQ528_RS01990 PF03167 Uracil DNA glycosylase superfamily NQ528_RS01995 PF06130 Phosphate propanoyltransferase NQ528_RS02000 PF00072 Response regulator receiver domain NQ528_RS02000 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS02005 PF00672 HAMP domain NQ528_RS02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS02005 PF18698 Histidine kinase sensor domain NQ528_RS02005 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS02005 PF00989 PAS fold NQ528_RS02010 PF00209 Sodium:neurotransmitter symporter family NQ528_RS02030 PF01471 Putative peptidoglycan binding domain NQ528_RS02030 PF01183 Glycosyl hydrolases family 25 NQ528_RS02220 PF13401 AAA domain NQ528_RS02220 PF09077 Mu B transposition protein, C terminal NQ528_RS02245 PF02498 BRO family, N-terminal domain NQ528_RS02245 PF10548 P22AR C-terminal domain NQ528_RS02260 PF13378 Enolase C-terminal domain-like NQ528_RS02260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_RS02265 PF13378 Enolase C-terminal domain-like NQ528_RS02265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_RS02275 PF13378 Enolase C-terminal domain-like NQ528_RS02275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_RS02285 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS02285 PF07729 FCD domain NQ528_RS02295 PF00005 ABC transporter NQ528_RS02300 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS02305 PF00391 PEP-utilising enzyme, mobile domain NQ528_RS02305 PF00224 Pyruvate kinase, barrel domain NQ528_RS02305 PF02887 Pyruvate kinase, alpha/beta domain NQ528_RS02315 PF11842 Domain of unknown function (DUF3362) NQ528_RS02315 PF04055 Radical SAM superfamily NQ528_RS02315 PF08497 Radical SAM N-terminal NQ528_RS02320 PF17854 FtsK alpha domain NQ528_RS02320 PF09397 Ftsk gamma domain NQ528_RS02320 PF01580 FtsK/SpoIIIE family NQ528_RS02325 PF02673 Bacitracin resistance protein BacA NQ528_RS02330 PF00574 Clp protease NQ528_RS02335 PF00398 Ribosomal RNA adenine dimethylase NQ528_RS02355 PF02397 Bacterial sugar transferase NQ528_RS02360 PF04138 GtrA-like protein NQ528_RS02365 PF00535 Glycosyl transferase family 2 NQ528_RS02370 PF01061 ABC-2 type transporter NQ528_RS02375 PF14524 Wzt C-terminal domain NQ528_RS02375 PF00005 ABC transporter NQ528_RS02380 PF17994 Galactofuranosyltransferase 2 N-terminal NQ528_RS02385 PF03275 UDP-galactopyranose mutase NQ528_RS02390 PF00535 Glycosyl transferase family 2 NQ528_RS02395 PF17425 Arylsulfotransferase Ig-like domain NQ528_RS02395 PF05935 Arylsulfotransferase (ASST) NQ528_RS02420 PF00535 Glycosyl transferase family 2 NQ528_RS02430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_RS02430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_RS02435 PF06971 Putative DNA-binding protein N-terminus NQ528_RS02435 PF02629 CoA binding domain NQ528_RS02440 PF00180 Isocitrate/isopropylmalate dehydrogenase NQ528_RS02440 PF18324 Hypothetical protein TT1725 NQ528_RS02460 PF01926 50S ribosome-binding GTPase NQ528_RS02460 PF06071 Protein of unknown function (DUF933) NQ528_RS02465 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS02465 PF00072 Response regulator receiver domain NQ528_RS02470 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS02470 PF00672 HAMP domain NQ528_RS02475 PF13180 PDZ domain NQ528_RS02495 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_RS02500 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NQ528_RS02505 PF02978 Signal peptide binding domain NQ528_RS02505 PF02881 SRP54-type protein, helical bundle domain NQ528_RS02505 PF00448 SRP54-type protein, GTPase domain NQ528_RS02510 PF00886 Ribosomal protein S16 NQ528_RS02520 PF01782 RimM N-terminal domain NQ528_RS02520 PF05239 PRC-barrel domain NQ528_RS02525 PF01746 tRNA (Guanine-1)-methyltransferase NQ528_RS02530 PF00381 PTS HPr component phosphorylation site NQ528_RS02535 PF08459 UvrC Helix-hairpin-helix N-terminal NQ528_RS02535 PF02151 UvrB/uvrC motif NQ528_RS02535 PF01541 GIY-YIG catalytic domain NQ528_RS02545 PF01467 Cytidylyltransferase-like NQ528_RS02555 PF00154 recA bacterial DNA recombination protein NQ528_RS02560 PF02631 RecX family NQ528_RS02565 PF04055 Radical SAM superfamily NQ528_RS02565 PF18693 TRAM domain NQ528_RS02565 PF00919 Uncharacterized protein family UPF0004 NQ528_RS02570 PF01066 CDP-alcohol phosphatidyltransferase NQ528_RS02575 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_RS02580 PF01406 tRNA synthetases class I (C) catalytic domain NQ528_RS02580 PF09190 DALR domain NQ528_RS02590 PF03772 Competence protein NQ528_RS02590 PF00753 Metallo-beta-lactamase superfamily NQ528_RS02600 PF13331 Domain of unknown function (DUF4093) NQ528_RS02620 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_RS02620 PF00107 Zinc-binding dehydrogenase NQ528_RS02625 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS02630 PF00005 ABC transporter NQ528_RS02635 PF13407 Periplasmic binding protein domain NQ528_RS02640 PF01116 Fructose-bisphosphate aldolase class-II NQ528_RS02645 PF00294 pfkB family carbohydrate kinase NQ528_RS02650 PF02734 DAK2 domain NQ528_RS02655 PF02733 Dak1 domain NQ528_RS02660 PF08220 DeoR-like helix-turn-helix domain NQ528_RS02660 PF00455 DeoR C terminal sensor domain NQ528_RS02670 PF03764 Elongation factor G, domain IV NQ528_RS02670 PF00009 Elongation factor Tu GTP binding domain NQ528_RS02670 PF00679 Elongation factor G C-terminus NQ528_RS02670 PF14492 Elongation Factor G, domain II NQ528_RS02675 PF01048 Phosphorylase superfamily NQ528_RS02680 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS02685 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS02690 PF00005 ABC transporter NQ528_RS02695 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_RS02700 PF01791 DeoC/LacD family aldolase NQ528_RS02705 PF00455 DeoR C terminal sensor domain NQ528_RS02705 PF08220 DeoR-like helix-turn-helix domain NQ528_RS02715 PF07883 Cupin domain NQ528_RS02720 PF07687 Peptidase dimerisation domain NQ528_RS02720 PF01546 Peptidase family M20/M25/M40 NQ528_RS02725 PF02447 GntP family permease NQ528_RS02730 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_RS02735 PF09861 Lactate racemase N-terminal domain NQ528_RS02745 PF01661 Macro domain NQ528_RS02750 PF03553 Na+/H+ antiporter family NQ528_RS02755 PF00072 Response regulator receiver domain NQ528_RS02755 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS02760 PF13493 Domain of unknown function (DUF4118) NQ528_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS02760 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS02760 PF02702 Osmosensitive K+ channel His kinase sensor domain NQ528_RS02770 PF02080 TrkA-C domain NQ528_RS02770 PF02254 TrkA-N domain NQ528_RS02775 PF02386 Cation transport protein NQ528_RS02790 PF02669 K+-transporting ATPase, c chain NQ528_RS02800 PF03814 Potassium-transporting ATPase A subunit NQ528_RS02805 PF13493 Domain of unknown function (DUF4118) NQ528_RS02805 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS02805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS02805 PF02702 Osmosensitive K+ channel His kinase sensor domain NQ528_RS02825 PF01964 Radical SAM ThiC family NQ528_RS02835 PF00581 Rhodanese-like domain NQ528_RS02885 PF00403 Heavy-metal-associated domain NQ528_RS02890 PF02583 Metal-sensitive transcriptional repressor NQ528_RS02915 PF13407 Periplasmic binding protein domain NQ528_RS02925 PF00672 HAMP domain NQ528_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS02925 PF06580 Histidine kinase NQ528_RS02925 PF02743 Cache domain NQ528_RS02930 PF00072 Response regulator receiver domain NQ528_RS02930 PF12833 Helix-turn-helix domain NQ528_RS02935 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS02940 PF00005 ABC transporter NQ528_RS02945 PF13407 Periplasmic binding protein domain NQ528_RS02950 PF01475 Ferric uptake regulator family NQ528_RS02955 PF01297 Zinc-uptake complex component A periplasmic NQ528_RS02960 PF00005 ABC transporter NQ528_RS02965 PF00950 ABC 3 transport family NQ528_RS02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS02970 PF00672 HAMP domain NQ528_RS02970 PF02203 Tar ligand binding domain homologue NQ528_RS02975 PF02796 Helix-turn-helix domain of resolvase NQ528_RS02975 PF00239 Resolvase, N terminal domain NQ528_RS02980 PF01381 Helix-turn-helix NQ528_RS02985 PF02742 Iron dependent repressor, metal binding and dimerisation domain NQ528_RS02985 PF01325 Iron dependent repressor, N-terminal DNA binding domain NQ528_RS02990 PF02535 ZIP Zinc transporter NQ528_RS02995 PF00005 ABC transporter NQ528_RS03000 PF01458 Uncharacterized protein family (UPF0051) NQ528_RS03020 PF01554 MatE NQ528_RS03025 PF03313 Serine dehydratase alpha chain NQ528_RS03030 PF01842 ACT domain NQ528_RS03030 PF03315 Serine dehydratase beta chain NQ528_RS03045 PF02508 Rnf-Nqr subunit, membrane protein NQ528_RS03050 PF02508 Rnf-Nqr subunit, membrane protein NQ528_RS03055 PF03116 NQR2, RnfD, RnfE family NQ528_RS03070 PF00834 Ribulose-phosphate 3 epimerase family NQ528_RS03135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS03135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS03145 PF01261 Xylose isomerase-like TIM barrel NQ528_RS03150 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS03165 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS03170 PF00005 ABC transporter NQ528_RS03170 PF08402 TOBE domain NQ528_RS03175 PF06134 L-rhamnose isomerase (RhaA) NQ528_RS03180 PF01156 Inosine-uridine preferring nucleoside hydrolase NQ528_RS03185 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS03210 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NQ528_RS03210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NQ528_RS03215 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NQ528_RS03220 PF03480 Bacterial extracellular solute-binding protein, family 7 NQ528_RS03225 PF00701 Dihydrodipicolinate synthetase family NQ528_RS03235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_RS03235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_RS03235 PF01842 ACT domain NQ528_RS03240 PF09339 IclR helix-turn-helix domain NQ528_RS03240 PF01614 Bacterial transcriptional regulator NQ528_RS03245 PF00107 Zinc-binding dehydrogenase NQ528_RS03245 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_RS03255 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS03260 PF08450 SMP-30/Gluconolactonase/LRE-like region NQ528_RS03265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_RS03265 PF13378 Enolase C-terminal domain-like NQ528_RS03275 PF00005 ABC transporter NQ528_RS03280 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS03285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQ528_RS03295 PF17128 Domain of unknown function (DUF5107) NQ528_RS03295 PF13181 Tetratricopeptide repeat NQ528_RS03305 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 NQ528_RS03320 PF00072 Response regulator receiver domain NQ528_RS03320 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS03325 PF00989 PAS fold NQ528_RS03325 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS03325 PF11808 Phosphate regulon sensor protein PhoR NQ528_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS03330 PF06418 CTP synthase N-terminus NQ528_RS03330 PF00117 Glutamine amidotransferase class-I NQ528_RS03335 PF03861 ANTAR domain NQ528_RS03335 PF08376 Nitrate and nitrite sensing NQ528_RS03340 PF00120 Glutamine synthetase, catalytic domain NQ528_RS03340 PF03951 Glutamine synthetase, beta-Grasp domain NQ528_RS03350 PF13187 4Fe-4S dicluster domain NQ528_RS03350 PF01645 Conserved region in glutamate synthase NQ528_RS03355 PF00310 Glutamine amidotransferases class-II NQ528_RS03360 PF03590 Aspartate-ammonia ligase NQ528_RS03365 PF18318 Glutamine synthetase C-terminal domain NQ528_RS03365 PF12437 Glutamine synthetase type III N terminal NQ528_RS03365 PF00120 Glutamine synthetase, catalytic domain NQ528_RS03395 PF01183 Glycosyl hydrolases family 25 NQ528_RS03395 PF01471 Putative peptidoglycan binding domain NQ528_RS03415 PF04260 Protein of unknown function (DUF436) NQ528_RS03420 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NQ528_RS03430 PF07729 FCD domain NQ528_RS03430 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS03435 PF01979 Amidohydrolase family NQ528_RS03440 PF00860 Permease family NQ528_RS03445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_RS03445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_RS03450 PF03450 CO dehydrogenase flavoprotein C-terminal domain NQ528_RS03450 PF00941 FAD binding domain in molybdopterin dehydrogenase NQ528_RS03455 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_RS03455 PF01799 [2Fe-2S] binding domain NQ528_RS03460 PF01967 MoaC family NQ528_RS03465 PF00994 Probable molybdopterin binding domain NQ528_RS03465 PF18146 Damage-inducible protein CinA KH domain NQ528_RS03465 PF02464 Competence-damaged protein NQ528_RS03475 PF00860 Permease family NQ528_RS03480 PF13309 HTH domain NQ528_RS03480 PF08348 YheO-like PAS domain NQ528_RS03490 PF01979 Amidohydrolase family NQ528_RS03495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQ528_RS03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS03500 PF01979 Amidohydrolase family NQ528_RS03510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_RS03510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_RS03515 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_RS03520 PF01546 Peptidase family M20/M25/M40 NQ528_RS03520 PF07687 Peptidase dimerisation domain NQ528_RS03525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQ528_RS03525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQ528_RS03530 PF00696 Amino acid kinase family NQ528_RS03550 PF00266 Aminotransferase class-V NQ528_RS03555 PF12390 Selenocysteine synthase N terminal NQ528_RS03555 PF03841 L-seryl-tRNA selenium transferase NQ528_RS03560 PF09107 Elongation factor SelB, winged helix NQ528_RS03560 PF09105 Elongation factor SelB, winged helix NQ528_RS03560 PF09106 Elongation factor SelB, winged helix NQ528_RS03560 PF00009 Elongation factor Tu GTP binding domain NQ528_RS03560 PF03144 Elongation factor Tu domain 2 NQ528_RS03580 PF00871 Acetokinase family NQ528_RS03630 PF01979 Amidohydrolase family NQ528_RS03635 PF07071 KDGP aldolase NQ528_RS03640 PF03841 L-seryl-tRNA selenium transferase NQ528_RS03670 PF01979 Amidohydrolase family NQ528_RS03675 PF03123 CAT RNA binding domain NQ528_RS03675 PF00874 PRD domain NQ528_RS03680 PF01420 Type I restriction modification DNA specificity domain NQ528_RS03685 PF01420 Type I restriction modification DNA specificity domain NQ528_RS03705 PF13276 HTH-like domain NQ528_RS03705 PF13333 Integrase core domain NQ528_RS03705 PF00665 Integrase core domain NQ528_RS03710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NQ528_RS03710 PF01348 Type II intron maturase NQ528_RS03725 PF01381 Helix-turn-helix NQ528_RS03755 PF18277 AbrB C-terminal domain NQ528_RS03755 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NQ528_RS03795 PF00436 Single-strand binding protein family NQ528_RS03810 PF07486 Cell Wall Hydrolase NQ528_RS03810 PF01471 Putative peptidoglycan binding domain NQ528_RS03825 PF09397 Ftsk gamma domain NQ528_RS03825 PF17854 FtsK alpha domain NQ528_RS03825 PF01580 FtsK/SpoIIIE family NQ528_RS03850 PF17762 HTH domain found in ParB protein NQ528_RS03850 PF02195 ParB-like nuclease domain NQ528_RS04065 PF01183 Glycosyl hydrolases family 25 NQ528_RS04065 PF01471 Putative peptidoglycan binding domain NQ528_RS04120 PF13635 Domain of unknown function (DUF4143) NQ528_RS04120 PF13173 AAA domain NQ528_RS04130 PF11798 IMS family HHH motif NQ528_RS04130 PF00817 impB/mucB/samB family NQ528_RS04130 PF11799 impB/mucB/samB family C-terminal domain NQ528_RS04160 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NQ528_RS04220 PF01139 tRNA-splicing ligase RtcB NQ528_RS04505 PF01476 LysM domain NQ528_RS04505 PF08525 Opacity-associated protein A N-terminal motif NQ528_RS04505 PF01551 Peptidase family M23 NQ528_RS04540 PF00145 C-5 cytosine-specific DNA methylase NQ528_RS04625 PF00437 Type II/IV secretion system protein NQ528_RS04640 PF06750 Bacterial Peptidase A24 N-terminal domain NQ528_RS04640 PF01478 Type IV leader peptidase family NQ528_RS04650 PF04026 SpoVG NQ528_RS04745 PF00270 DEAD/DEAH box helicase NQ528_RS04745 PF00271 Helicase conserved C-terminal domain NQ528_RS04745 PF17191 RecG wedge domain NQ528_RS04750 PF00871 Acetokinase family NQ528_RS04765 PF03062 MBOAT, membrane-bound O-acyltransferase family NQ528_RS04780 PF00912 Transglycosylase NQ528_RS04780 PF00905 Penicillin binding protein transpeptidase domain NQ528_RS04790 PF03309 Type III pantothenate kinase NQ528_RS04825 PF00561 alpha/beta hydrolase fold NQ528_RS04835 PF01047 MarR family NQ528_RS04855 PF05670 NFACT protein RNA binding domain NQ528_RS04860 PF00155 Aminotransferase class I and II NQ528_RS04865 PF01037 Lrp/AsnC ligand binding domain NQ528_RS04880 PF05167 Uncharacterised ACR (DUF711) NQ528_RS04915 PF01726 LexA DNA binding domain NQ528_RS04915 PF00717 Peptidase S24-like NQ528_RS04920 PF00719 Inorganic pyrophosphatase NQ528_RS04925 PF07664 Ferrous iron transport protein B C terminus NQ528_RS04925 PF02421 Ferrous iron transport protein B NQ528_RS04925 PF07670 Nucleoside recognition NQ528_RS04925 PF17910 FeoB cytosolic helical domain NQ528_RS04930 PF03788 LrgA family NQ528_RS04935 PF04172 LrgB-like family NQ528_RS04940 PF01966 HD domain NQ528_RS04940 PF00013 KH domain NQ528_RS04940 PF12072 Domain of unknown function (DUF3552) NQ528_RS04945 PF03129 Anticodon binding domain NQ528_RS04945 PF02824 TGS domain NQ528_RS04945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_RS04945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQ528_RS04955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQ528_RS04960 PF00753 Metallo-beta-lactamase superfamily NQ528_RS04965 PF02590 Predicted SPOUT methyltransferase NQ528_RS04970 PF01522 Polysaccharide deacetylase NQ528_RS04970 PF14883 Hypothetical glycosyl hydrolase family 13 NQ528_RS04975 PF00270 DEAD/DEAH box helicase NQ528_RS04975 PF00271 Helicase conserved C-terminal domain NQ528_RS04980 PF02872 5'-nucleotidase, C-terminal domain NQ528_RS04980 PF00149 Calcineurin-like phosphoesterase NQ528_RS05000 PF09370 Phosphoenolpyruvate hydrolase-like NQ528_RS05035 PF01541 GIY-YIG catalytic domain NQ528_RS05035 PF12826 Helix-hairpin-helix motif NQ528_RS05035 PF02151 UvrB/uvrC motif NQ528_RS05035 PF08459 UvrC Helix-hairpin-helix N-terminal NQ528_RS05040 PF03006 Haemolysin-III related NQ528_RS05050 PF02638 Glycosyl hydrolase-like 10 NQ528_RS05055 PF11741 AMIN domain NQ528_RS05055 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_RS05060 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NQ528_RS05060 PF00175 Oxidoreductase NAD-binding domain NQ528_RS05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS05065 PF13247 4Fe-4S dicluster domain NQ528_RS05065 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQ528_RS05070 PF04225 Opacity-associated protein A LysM-like domain NQ528_RS05070 PF01551 Peptidase family M23 NQ528_RS05095 PF07883 Cupin domain NQ528_RS05100 PF01245 Ribosomal protein L19 NQ528_RS05105 PF10502 Signal peptidase, peptidase S26 NQ528_RS05110 PF10502 Signal peptidase, peptidase S26 NQ528_RS05115 PF01926 50S ribosome-binding GTPase NQ528_RS05120 PF01351 Ribonuclease HII NQ528_RS05125 PF02021 Uncharacterised protein family UPF0102 NQ528_RS05140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQ528_RS05140 PF05698 Bacterial trigger factor protein (TF) C-terminus NQ528_RS05140 PF05697 Bacterial trigger factor protein (TF) NQ528_RS05145 PF00574 Clp protease NQ528_RS05150 PF07724 AAA domain (Cdc48 subfamily) NQ528_RS05150 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_RS05150 PF06689 ClpX C4-type zinc finger NQ528_RS05155 PF02190 ATP-dependent protease La (LON) substrate-binding domain NQ528_RS05155 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS05155 PF05362 Lon protease (S16) C-terminal proteolytic domain NQ528_RS05160 PF01926 50S ribosome-binding GTPase NQ528_RS05165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NQ528_RS05165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NQ528_RS05170 PF01371 Trp repressor protein NQ528_RS05175 PF13649 Methyltransferase domain NQ528_RS05180 PF01430 Hsp33 protein NQ528_RS05190 PF00633 Helix-hairpin-helix motif NQ528_RS05190 PF00730 HhH-GPD superfamily base excision DNA repair protein NQ528_RS05210 PF01594 AI-2E family transporter NQ528_RS05220 PF00391 PEP-utilising enzyme, mobile domain NQ528_RS05220 PF02896 PEP-utilising enzyme, TIM barrel domain NQ528_RS05220 PF05524 PEP-utilising enzyme, N-terminal NQ528_RS05230 PF00664 ABC transporter transmembrane region NQ528_RS05230 PF00005 ABC transporter NQ528_RS05235 PF00664 ABC transporter transmembrane region NQ528_RS05235 PF00005 ABC transporter NQ528_RS05245 PF00072 Response regulator receiver domain NQ528_RS05245 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS05255 PF04545 Sigma-70, region 4 NQ528_RS05255 PF04542 Sigma-70 region 2 NQ528_RS05265 PF00365 Phosphofructokinase NQ528_RS05300 PF00672 HAMP domain NQ528_RS05300 PF07228 Stage II sporulation protein E (SpoIIE) NQ528_RS05305 PF13581 Histidine kinase-like ATPase domain NQ528_RS05325 PF00664 ABC transporter transmembrane region NQ528_RS05325 PF00005 ABC transporter NQ528_RS05325 PF03412 Peptidase C39 family NQ528_RS05330 PF00664 ABC transporter transmembrane region NQ528_RS05330 PF00005 ABC transporter NQ528_RS05330 PF03412 Peptidase C39 family NQ528_RS05335 PF01740 STAS domain NQ528_RS05345 PF00873 AcrB/AcrD/AcrF family NQ528_RS05350 PF00529 HlyD membrane-fusion protein of T1SS NQ528_RS05350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQ528_RS05355 PF00202 Aminotransferase class-III NQ528_RS05360 PF00490 Delta-aminolevulinic acid dehydratase NQ528_RS05365 PF02602 Uroporphyrinogen-III synthase HemD NQ528_RS05365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_RS05370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NQ528_RS05370 PF03900 Porphobilinogen deaminase, C-terminal domain NQ528_RS05375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NQ528_RS05375 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_RS05380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NQ528_RS05380 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_RS05400 PF01628 HrcA protein C terminal domain NQ528_RS05405 PF01025 GrpE NQ528_RS05410 PF00012 Hsp70 protein NQ528_RS05415 PF00226 DnaJ domain NQ528_RS05415 PF01556 DnaJ C terminal domain NQ528_RS05415 PF00684 DnaJ central domain NQ528_RS05425 PF04452 RNA methyltransferase NQ528_RS05430 PF02557 D-alanyl-D-alanine carboxypeptidase NQ528_RS05455 PF00005 ABC transporter NQ528_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS05465 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_RS05470 PF00933 Glycosyl hydrolase family 3 N terminal domain NQ528_RS05470 PF01915 Glycosyl hydrolase family 3 C-terminal domain NQ528_RS05475 PF13458 Periplasmic binding protein NQ528_RS05480 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS05485 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS05485 PF11862 Domain of unknown function (DUF3382) NQ528_RS05490 PF00005 ABC transporter NQ528_RS05490 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS05495 PF00005 ABC transporter NQ528_RS05500 PF04073 Aminoacyl-tRNA editing domain NQ528_RS05505 PF00128 Alpha amylase, catalytic domain NQ528_RS05510 PF02915 Rubrerythrin NQ528_RS05515 PF01475 Ferric uptake regulator family NQ528_RS05520 PF01813 ATP synthase subunit D NQ528_RS05525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQ528_RS05525 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQ528_RS05530 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQ528_RS05530 PF16886 ATPsynthase alpha/beta subunit N-term extension NQ528_RS05530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQ528_RS05535 PF01990 ATP synthase (F/14-kDa) subunit NQ528_RS05550 PF00137 ATP synthase subunit C NQ528_RS05555 PF01496 V-type ATPase 116kDa subunit family NQ528_RS05570 PF00005 ABC transporter NQ528_RS05575 PF02687 FtsX-like permease family NQ528_RS05575 PF12704 MacB-like periplasmic core domain NQ528_RS05580 PF08903 Domain of unknown function (DUF1846) NQ528_RS05585 PF01116 Fructose-bisphosphate aldolase class-II NQ528_RS05590 PF00005 ABC transporter NQ528_RS05595 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS05600 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_RS05605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NQ528_RS05605 PF01926 50S ribosome-binding GTPase NQ528_RS05615 PF06968 Biotin and Thiamin Synthesis associated domain NQ528_RS05615 PF04055 Radical SAM superfamily NQ528_RS05630 PF00270 DEAD/DEAH box helicase NQ528_RS05630 PF12343 Cold shock protein DEAD box A NQ528_RS05630 PF00271 Helicase conserved C-terminal domain NQ528_RS05630 PF03880 DbpA RNA binding domain NQ528_RS05635 PF00474 Sodium:solute symporter family NQ528_RS05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NQ528_RS05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NQ528_RS05650 PF02599 Global regulator protein family NQ528_RS05655 PF00700 Bacterial flagellin C-terminal helical region NQ528_RS05655 PF00669 Bacterial flagellin N-terminal helical region NQ528_RS05660 PF00700 Bacterial flagellin C-terminal helical region NQ528_RS05660 PF00669 Bacterial flagellin N-terminal helical region NQ528_RS05665 PF01501 Glycosyl transferase family 8 NQ528_RS05665 PF00535 Glycosyl transferase family 2 NQ528_RS05670 PF00483 Nucleotidyl transferase NQ528_RS05680 PF01370 NAD dependent epimerase/dehydratase family NQ528_RS05685 PF16363 GDP-mannose 4,6 dehydratase NQ528_RS05690 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_RS05695 PF02779 Transketolase, pyrimidine binding domain NQ528_RS05695 PF02780 Transketolase, C-terminal domain NQ528_RS05695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_RS05705 PF03275 UDP-galactopyranose mutase NQ528_RS05710 PF00535 Glycosyl transferase family 2 NQ528_RS05710 PF01501 Glycosyl transferase family 8 NQ528_RS05715 PF00535 Glycosyl transferase family 2 NQ528_RS05715 PF01501 Glycosyl transferase family 8 NQ528_RS05730 PF08942 Domain of unknown function (DUF1919) NQ528_RS05755 PF00391 PEP-utilising enzyme, mobile domain NQ528_RS05755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NQ528_RS05760 PF07722 Peptidase C26 NQ528_RS05765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NQ528_RS05770 PF02811 PHP domain NQ528_RS05780 PF01814 Hemerythrin HHE cation binding domain NQ528_RS05790 PF00072 Response regulator receiver domain NQ528_RS05790 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS05795 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS05795 PF00989 PAS fold NQ528_RS05795 PF16736 Single Cache-like NQ528_RS05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS05800 PF03413 Peptidase propeptide and YPEB domain NQ528_RS05805 PF02887 Pyruvate kinase, alpha/beta domain NQ528_RS05805 PF00391 PEP-utilising enzyme, mobile domain NQ528_RS05805 PF00224 Pyruvate kinase, barrel domain NQ528_RS05820 PF00207 Alpha-2-macroglobulin family NQ528_RS05820 PF07703 Alpha-2-macroglobulin bait region domain NQ528_RS05820 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NQ528_RS05820 PF01835 MG2 domain NQ528_RS05820 PF07678 A-macroglobulin TED domain NQ528_RS05830 PF00535 Glycosyl transferase family 2 NQ528_RS05830 PF13181 Tetratricopeptide repeat NQ528_RS05835 PF01048 Phosphorylase superfamily NQ528_RS05845 PF03063 Prismane/CO dehydrogenase family NQ528_RS05855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NQ528_RS05855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NQ528_RS05900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_RS05905 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_RS05905 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_RS05915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_RS05920 PF03606 C4-dicarboxylate anaerobic carrier NQ528_RS05925 PF01467 Cytidylyltransferase-like NQ528_RS05935 PF13411 MerR HTH family regulatory protein NQ528_RS05985 PF01348 Type II intron maturase NQ528_RS05985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NQ528_RS06030 PF01047 MarR family NQ528_RS06030 PF00480 ROK family NQ528_RS06040 PF13407 Periplasmic binding protein domain NQ528_RS06045 PF00005 ABC transporter NQ528_RS06050 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS06065 PF03454 MoeA C-terminal region (domain IV) NQ528_RS06065 PF00994 Probable molybdopterin binding domain NQ528_RS06065 PF03453 MoeA N-terminal region (domain I and II) NQ528_RS06070 PF01209 ubiE/COQ5 methyltransferase family NQ528_RS06075 PF01032 FecCD transport family NQ528_RS06100 PF04055 Radical SAM superfamily NQ528_RS06120 PF03432 Relaxase/Mobilisation nuclease domain NQ528_RS06145 PF18840 Large polyvalent protein associated domain 25 NQ528_RS06150 PF01751 Toprim domain NQ528_RS06150 PF01131 DNA topoisomerase NQ528_RS06175 PF01555 DNA methylase NQ528_RS06215 PF01807 CHC2 zinc finger NQ528_RS06215 PF10410 DnaB-helicase binding domain of primase NQ528_RS06215 PF08278 DNA primase DnaG DnaB-binding NQ528_RS06215 PF08275 DNA primase catalytic core, N-terminal domain NQ528_RS06220 PF17841 BID domain of Bartonella effector protein (Bep) NQ528_RS06220 PF03389 MobA/MobL family NQ528_RS06220 PF01443 Viral (Superfamily 1) RNA helicase NQ528_RS06250 PF01381 Helix-turn-helix NQ528_RS06315 PF13490 Putative zinc-finger NQ528_RS06320 PF04542 Sigma-70 region 2 NQ528_RS06320 PF08281 Sigma-70, region 4 NQ528_RS06355 PF01443 Viral (Superfamily 1) RNA helicase NQ528_RS06355 PF17841 BID domain of Bartonella effector protein (Bep) NQ528_RS06355 PF03389 MobA/MobL family NQ528_RS06400 PF01032 FecCD transport family NQ528_RS06405 PF00005 ABC transporter NQ528_RS06410 PF01497 Periplasmic binding protein NQ528_RS06415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NQ528_RS06415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NQ528_RS06420 PF04227 Indigoidine synthase A like protein NQ528_RS06425 PF00294 pfkB family carbohydrate kinase NQ528_RS06440 PF01380 SIS domain NQ528_RS06440 PF00571 CBS domain NQ528_RS06445 PF00294 pfkB family carbohydrate kinase NQ528_RS06450 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS06465 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_RS06480 PF00701 Dihydrodipicolinate synthetase family NQ528_RS06495 PF01381 Helix-turn-helix NQ528_RS06515 PF01546 Peptidase family M20/M25/M40 NQ528_RS06520 PF03169 OPT oligopeptide transporter protein NQ528_RS06535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NQ528_RS06545 PF07664 Ferrous iron transport protein B C terminus NQ528_RS06545 PF17910 FeoB cytosolic helical domain NQ528_RS06545 PF02421 Ferrous iron transport protein B NQ528_RS06545 PF07670 Nucleoside recognition NQ528_RS06555 PF12833 Helix-turn-helix domain NQ528_RS06560 PF02342 TerD domain NQ528_RS06565 PF00689 Cation transporting ATPase, C-terminus NQ528_RS06565 PF00690 Cation transporter/ATPase, N-terminus NQ528_RS06575 PF15608 PELOTA RNA binding domain NQ528_RS06575 PF11202 Phosphoribosyl transferase (PRTase) NQ528_RS06590 PF02342 TerD domain NQ528_RS06595 PF02342 TerD domain NQ528_RS06600 PF02342 TerD domain NQ528_RS06605 PF05816 Toxic anion resistance protein (TelA) NQ528_RS06615 PF02342 TerD domain NQ528_RS06625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NQ528_RS06625 PF00056 lactate/malate dehydrogenase, NAD binding domain NQ528_RS06630 PF00183 Hsp90 protein NQ528_RS06635 PF13419 Haloacid dehalogenase-like hydrolase NQ528_RS06645 PF00474 Sodium:solute symporter family NQ528_RS06670 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_RS06670 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_RS06670 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_RS06685 PF12705 PD-(D/E)XK nuclease superfamily NQ528_RS06690 PF12705 PD-(D/E)XK nuclease superfamily NQ528_RS06695 PF12705 PD-(D/E)XK nuclease superfamily NQ528_RS06695 PF00580 UvrD/REP helicase N-terminal domain NQ528_RS06695 PF13361 UvrD-like helicase C-terminal domain NQ528_RS06705 PF00707 Translation initiation factor IF-3, C-terminal domain NQ528_RS06705 PF05198 Translation initiation factor IF-3, N-terminal domain NQ528_RS06710 PF01632 Ribosomal protein L35 NQ528_RS06715 PF00453 Ribosomal protein L20 NQ528_RS06720 PF08032 RNA 2'-O ribose methyltransferase substrate binding NQ528_RS06720 PF00588 SpoU rRNA Methylase family NQ528_RS06725 PF02481 DNA recombination-mediator protein A NQ528_RS06725 PF17782 DprA winged helix domain NQ528_RS06730 PF01131 DNA topoisomerase NQ528_RS06730 PF01396 Topoisomerase DNA binding C4 zinc finger NQ528_RS06730 PF01751 Toprim domain NQ528_RS06735 PF01134 Glucose inhibited division protein A NQ528_RS06740 PF02504 Fatty acid synthesis protein NQ528_RS06745 PF00035 Double-stranded RNA binding motif NQ528_RS06745 PF14622 Ribonuclease-III-like NQ528_RS06750 PF00583 Acetyltransferase (GNAT) family NQ528_RS06750 PF04055 Radical SAM superfamily NQ528_RS06750 PF16199 Radical_SAM C-terminal domain NQ528_RS06755 PF02463 RecF/RecN/SMC N terminal domain NQ528_RS06755 PF06470 SMC proteins Flexible Hinge Domain NQ528_RS06760 PF00448 SRP54-type protein, GTPase domain NQ528_RS06760 PF02881 SRP54-type protein, helical bundle domain NQ528_RS06765 PF01725 Ham1 family NQ528_RS06770 PF01985 CRS1 / YhbY (CRM) domain NQ528_RS06775 PF01467 Cytidylyltransferase-like NQ528_RS06780 PF01966 HD domain NQ528_RS06790 PF08264 Anticodon-binding domain of tRNA NQ528_RS06790 PF00133 tRNA synthetases class I (I, L, M and V) NQ528_RS06790 PF13603 Leucyl-tRNA synthetase, Domain 2 NQ528_RS06790 PF09334 tRNA synthetases class I (M) NQ528_RS06795 PF01165 Ribosomal protein S21 NQ528_RS06805 PF01220 Dehydroquinase class II NQ528_RS06810 PF01321 Creatinase/Prolidase N-terminal domain NQ528_RS06810 PF00557 Metallopeptidase family M24 NQ528_RS06815 PF01132 Elongation factor P (EF-P) OB domain NQ528_RS06815 PF08207 Elongation factor P (EF-P) KOW-like domain NQ528_RS06815 PF09285 Elongation factor P, C-terminal NQ528_RS06825 PF02424 ApbE family NQ528_RS06835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQ528_RS06835 PF13237 4Fe-4S dicluster domain NQ528_RS06835 PF13375 RnfC Barrel sandwich hybrid domain NQ528_RS06835 PF10531 SLBB domain NQ528_RS06840 PF03116 NQR2, RnfD, RnfE family NQ528_RS06850 PF02508 Rnf-Nqr subunit, membrane protein NQ528_RS06855 PF02508 Rnf-Nqr subunit, membrane protein NQ528_RS06860 PF04060 Putative Fe-S cluster NQ528_RS06865 PF01479 S4 domain NQ528_RS06865 PF00849 RNA pseudouridylate synthase NQ528_RS06870 PF04002 RadC-like JAB domain NQ528_RS06875 PF03466 LysR substrate binding domain NQ528_RS06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS06880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS06890 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_RS06890 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS06895 PF00005 ABC transporter NQ528_RS06895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS06900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS06900 PF00005 ABC transporter NQ528_RS06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS06910 PF00578 AhpC/TSA family NQ528_RS06920 PF00817 impB/mucB/samB family NQ528_RS06920 PF11799 impB/mucB/samB family C-terminal domain NQ528_RS06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS06930 PF03466 LysR substrate binding domain NQ528_RS06935 PF01032 FecCD transport family NQ528_RS06940 PF00005 ABC transporter NQ528_RS06945 PF00248 Aldo/keto reductase family NQ528_RS06950 PF01497 Periplasmic binding protein NQ528_RS06960 PF01979 Amidohydrolase family NQ528_RS06965 PF00155 Aminotransferase class I and II NQ528_RS06980 PF01979 Amidohydrolase family NQ528_RS07025 PF08463 EcoEI R protein C-terminal NQ528_RS07025 PF00271 Helicase conserved C-terminal domain NQ528_RS07025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQ528_RS07025 PF04851 Type III restriction enzyme, res subunit NQ528_RS07030 PF00271 Helicase conserved C-terminal domain NQ528_RS07030 PF08463 EcoEI R protein C-terminal NQ528_RS07030 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQ528_RS07030 PF04851 Type III restriction enzyme, res subunit NQ528_RS07035 PF01420 Type I restriction modification DNA specificity domain NQ528_RS07045 PF02384 N-6 DNA Methylase NQ528_RS07045 PF12161 HsdM N-terminal domain NQ528_RS07085 PF01557 Fumarylacetoacetate (FAA) hydrolase family NQ528_RS07090 PF01614 Bacterial transcriptional regulator NQ528_RS07090 PF09339 IclR helix-turn-helix domain NQ528_RS07095 PF03812 2-keto-3-deoxygluconate permease NQ528_RS07105 PF08666 SAF domain NQ528_RS07105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NQ528_RS07110 PF00682 HMGL-like NQ528_RS07110 PF08502 LeuA allosteric (dimerisation) domain NQ528_RS07125 PF01380 SIS domain NQ528_RS07125 PF01418 Helix-turn-helix domain, rpiR family NQ528_RS07135 PF02224 Cytidylate kinase NQ528_RS07145 PF00575 S1 RNA binding domain NQ528_RS07145 PF02401 LytB protein NQ528_RS07150 PF01368 DHH family NQ528_RS07150 PF02272 DHHA1 domain NQ528_RS07150 PF17768 RecJ OB domain NQ528_RS07155 PF13291 ACT domain NQ528_RS07155 PF04607 Region found in RelA / SpoT proteins NQ528_RS07155 PF02824 TGS domain NQ528_RS07160 PF02580 D-Tyr-tRNA(Tyr) deacylase NQ528_RS07165 PF00753 Metallo-beta-lactamase superfamily NQ528_RS07170 PF04055 Radical SAM superfamily NQ528_RS07180 PF01554 MatE NQ528_RS07185 PF01048 Phosphorylase superfamily NQ528_RS07190 PF01943 Polysaccharide biosynthesis protein NQ528_RS07190 PF14667 Polysaccharide biosynthesis C-terminal domain NQ528_RS07195 PF03819 MazG nucleotide pyrophosphohydrolase domain NQ528_RS07200 PF00216 Bacterial DNA-binding protein NQ528_RS07205 PF01479 S4 domain NQ528_RS07230 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NQ528_RS07235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS07235 PF00005 ABC transporter NQ528_RS07240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS07240 PF00005 ABC transporter NQ528_RS07245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS07255 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_RS07255 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS07260 PF04055 Radical SAM superfamily NQ528_RS07260 PF02579 Dinitrogenase iron-molybdenum cofactor NQ528_RS07275 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS07280 PF03480 Bacterial extracellular solute-binding protein, family 7 NQ528_RS07285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NQ528_RS07330 PF00075 RNase H NQ528_RS07430 PF02527 rRNA small subunit methyltransferase G NQ528_RS07450 PF00271 Helicase conserved C-terminal domain NQ528_RS07450 PF04851 Type III restriction enzyme, res subunit NQ528_RS07450 PF17757 UvrB interaction domain NQ528_RS07450 PF12344 Ultra-violet resistance protein B NQ528_RS07450 PF02151 UvrB/uvrC motif NQ528_RS07480 PF01614 Bacterial transcriptional regulator NQ528_RS07480 PF09339 IclR helix-turn-helix domain NQ528_RS07490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQ528_RS07490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_RS07490 PF00205 Thiamine pyrophosphate enzyme, central domain NQ528_RS07495 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_RS07495 PF00107 Zinc-binding dehydrogenase NQ528_RS07505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_RS07505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_RS07505 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_RS07505 PF01799 [2Fe-2S] binding domain NQ528_RS07510 PF00939 Sodium:sulfate symporter transmembrane region NQ528_RS07515 PF02779 Transketolase, pyrimidine binding domain NQ528_RS07515 PF02780 Transketolase, C-terminal domain NQ528_RS07515 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_RS07520 PF02779 Transketolase, pyrimidine binding domain NQ528_RS07520 PF02780 Transketolase, C-terminal domain NQ528_RS07525 PF00171 Aldehyde dehydrogenase family NQ528_RS07555 PF13340 Putative transposase of IS4/5 family (DUF4096) NQ528_RS07565 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_RS07580 PF00701 Dihydrodipicolinate synthetase family NQ528_RS07585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_RS07585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_RS07590 PF01614 Bacterial transcriptional regulator NQ528_RS07590 PF09339 IclR helix-turn-helix domain NQ528_RS07655 PF00589 Phage integrase family NQ528_RS07655 PF02899 Phage integrase, N-terminal SAM-like domain NQ528_RS07660 PF00589 Phage integrase family NQ528_RS07660 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_RS07665 PF17757 UvrB interaction domain NQ528_RS07665 PF02151 UvrB/uvrC motif NQ528_RS07665 PF04851 Type III restriction enzyme, res subunit NQ528_RS07665 PF00271 Helicase conserved C-terminal domain NQ528_RS07665 PF12344 Ultra-violet resistance protein B NQ528_RS07670 PF17760 UvrA interaction domain NQ528_RS07670 PF17755 UvrA DNA-binding domain NQ528_RS07675 PF00301 Rubredoxin NQ528_RS07680 PF00753 Metallo-beta-lactamase superfamily NQ528_RS07680 PF00258 Flavodoxin NQ528_RS07690 PF00919 Uncharacterized protein family UPF0004 NQ528_RS07690 PF04055 Radical SAM superfamily NQ528_RS07690 PF01938 TRAM domain NQ528_RS07700 PF01624 MutS domain I NQ528_RS07700 PF05188 MutS domain II NQ528_RS07700 PF05192 MutS domain III NQ528_RS07700 PF05190 MutS family domain IV NQ528_RS07700 PF00488 MutS domain V NQ528_RS07705 PF01119 DNA mismatch repair protein, C-terminal domain NQ528_RS07705 PF08676 MutL C terminal dimerisation domain NQ528_RS07715 PF17209 Hfq protein NQ528_RS07725 PF01168 Alanine racemase, N-terminal domain NQ528_RS07730 PF04472 Cell division protein SepF NQ528_RS07735 PF01479 S4 domain NQ528_RS07735 PF17774 Putative RNA-binding domain in YlmH NQ528_RS07745 PF08264 Anticodon-binding domain of tRNA NQ528_RS07745 PF00133 tRNA synthetases class I (I, L, M and V) NQ528_RS07745 PF06827 Zinc finger found in FPG and IleRS NQ528_RS07750 PF01252 Signal peptidase (SPase) II NQ528_RS07755 PF01479 S4 domain NQ528_RS07755 PF00849 RNA pseudouridylate synthase NQ528_RS07765 PF00999 Sodium/hydrogen exchanger family NQ528_RS07785 PF01078 Magnesium chelatase, subunit ChlI NQ528_RS07785 PF13335 Magnesium chelatase, subunit ChlI C-terminal NQ528_RS07790 PF02659 Putative manganese efflux pump NQ528_RS07795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQ528_RS07795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQ528_RS07795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQ528_RS07795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQ528_RS07805 PF01197 Ribosomal protein L31 NQ528_RS07810 PF00849 RNA pseudouridylate synthase NQ528_RS07810 PF01479 S4 domain NQ528_RS07815 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS07825 PF00005 ABC transporter NQ528_RS07830 PF13277 YmdB-like protein NQ528_RS07850 PF02734 DAK2 domain NQ528_RS07850 PF13684 Dihydroxyacetone kinase family NQ528_RS07865 PF02272 DHHA1 domain NQ528_RS07865 PF01411 tRNA synthetases class II (A) NQ528_RS07865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQ528_RS07870 PF01230 HIT domain NQ528_RS07880 PF00152 tRNA synthetases class II (D, K and N) NQ528_RS07880 PF01336 OB-fold nucleic acid binding domain NQ528_RS07885 PF12897 Alanine-glyoxylate amino-transferase NQ528_RS07890 PF10397 Adenylosuccinate lyase C-terminus NQ528_RS07890 PF00206 Lyase NQ528_RS07895 PF07549 SecD/SecF GG Motif NQ528_RS07895 PF02355 Protein export membrane protein NQ528_RS07900 PF02355 Protein export membrane protein NQ528_RS07900 PF07549 SecD/SecF GG Motif NQ528_RS07910 PF03477 ATP cone domain NQ528_RS07940 PF07475 HPr Serine kinase C-terminal domain NQ528_RS07940 PF02603 HPr Serine kinase N terminus NQ528_RS07945 PF02811 PHP domain NQ528_RS07950 PF00480 ROK family NQ528_RS07955 PF01565 FAD binding domain NQ528_RS07955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NQ528_RS07960 PF03668 P-loop ATPase protein family NQ528_RS07965 PF10298 WhiA N-terminal LAGLIDADG-like domain NQ528_RS07965 PF14527 WhiA LAGLIDADG-like domain NQ528_RS07965 PF02650 WhiA C-terminal HTH domain NQ528_RS07970 PF01906 Putative heavy-metal-binding NQ528_RS07975 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQ528_RS07975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQ528_RS07975 PF14579 Helix-hairpin-helix motif NQ528_RS07975 PF02811 PHP domain NQ528_RS07980 PF00365 Phosphofructokinase NQ528_RS07985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NQ528_RS07990 PF02542 YgbB family NQ528_RS08000 PF00266 Aminotransferase class-V NQ528_RS08005 PF02457 DisA bacterial checkpoint controller nucleotide-binding NQ528_RS08025 PF01170 Putative RNA methylase family UPF0020 NQ528_RS08025 PF02926 THUMP domain NQ528_RS08035 PF00533 BRCA1 C Terminus (BRCT) domain NQ528_RS08035 PF01653 NAD-dependent DNA ligase adenylation domain NQ528_RS08035 PF03120 NAD-dependent DNA ligase OB-fold domain NQ528_RS08035 PF12826 Helix-hairpin-helix motif NQ528_RS08035 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NQ528_RS08040 PF00817 impB/mucB/samB family NQ528_RS08040 PF11799 impB/mucB/samB family C-terminal domain NQ528_RS08060 PF00575 S1 RNA binding domain NQ528_RS08065 PF13382 Adenine deaminase C-terminal domain NQ528_RS08065 PF01979 Amidohydrolase family NQ528_RS08075 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NQ528_RS08075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NQ528_RS08165 PF01381 Helix-turn-helix NQ528_RS08225 PF00436 Single-strand binding protein family NQ528_RS08235 PF01695 IstB-like ATP binding protein NQ528_RS08375 PF13443 Cro/C1-type HTH DNA-binding domain NQ528_RS08445 PF01183 Glycosyl hydrolases family 25 NQ528_RS08445 PF01471 Putative peptidoglycan binding domain NQ528_RS08485 PF02075 Crossover junction endodeoxyribonuclease RuvC NQ528_RS08490 PF01330 RuvA N terminal domain NQ528_RS08490 PF07499 RuvA, C-terminal domain NQ528_RS08495 PF17864 RuvB AAA lid domain NQ528_RS08495 PF05491 RuvB C-terminal winged helix domain NQ528_RS08495 PF05496 Holliday junction DNA helicase RuvB P-loop domain NQ528_RS08500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQ528_RS08500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQ528_RS08500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQ528_RS08500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQ528_RS08505 PF01170 Putative RNA methylase family UPF0020 NQ528_RS08505 PF10672 S-adenosylmethionine-dependent methyltransferase NQ528_RS08505 PF02926 THUMP domain NQ528_RS08510 PF00005 ABC transporter NQ528_RS08515 PF00005 ABC transporter NQ528_RS08520 PF02361 Cobalt transport protein NQ528_RS08525 PF01416 tRNA pseudouridine synthase NQ528_RS08540 PF01066 CDP-alcohol phosphatidyltransferase NQ528_RS08545 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_RS08545 PF17871 AAA lid domain NQ528_RS08545 PF07724 AAA domain (Cdc48 subfamily) NQ528_RS08545 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS08550 PF10145 Phage-related minor tail protein NQ528_RS08550 PF01464 Transglycosylase SLT domain NQ528_RS08550 PF01551 Peptidase family M23 NQ528_RS08555 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_RS08565 PF02660 Glycerol-3-phosphate acyltransferase NQ528_RS08575 PF00701 Dihydrodipicolinate synthetase family NQ528_RS08590 PF00005 ABC transporter NQ528_RS08595 PF00005 ABC transporter NQ528_RS08595 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS08605 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS08635 PF04542 Sigma-70 region 2 NQ528_RS08635 PF08281 Sigma-70, region 4 NQ528_RS08645 PF02237 Biotin protein ligase C terminal domain NQ528_RS08645 PF03099 Biotin/lipoate A/B protein ligase family NQ528_RS08645 PF08279 HTH domain NQ528_RS08650 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_RS08655 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS08660 PF00005 ABC transporter NQ528_RS08670 PF03062 MBOAT, membrane-bound O-acyltransferase family NQ528_RS08685 PF17862 AAA+ lid domain NQ528_RS08685 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS08685 PF06480 FtsH Extracellular NQ528_RS08685 PF01434 Peptidase family M41 NQ528_RS08690 PF00209 Sodium:neurotransmitter symporter family NQ528_RS08700 PF00318 Ribosomal protein S2 NQ528_RS08705 PF00889 Elongation factor TS NQ528_RS08710 PF01958 Domain of unknown function DUF108 NQ528_RS08710 PF03447 Homoserine dehydrogenase, NAD binding domain NQ528_RS08720 PF09515 Thiamine transporter protein (Thia_YuaJ) NQ528_RS08730 PF13247 4Fe-4S dicluster domain NQ528_RS08730 PF12800 4Fe-4S binding domain NQ528_RS08735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQ528_RS08735 PF00384 Molybdopterin oxidoreductase NQ528_RS08735 PF01568 Molydopterin dinucleotide binding domain NQ528_RS08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS08745 PF13545 Crp-like helix-turn-helix domain NQ528_RS08745 PF00027 Cyclic nucleotide-binding domain NQ528_RS08750 PF03553 Na+/H+ antiporter family NQ528_RS08755 PF00155 Aminotransferase class I and II NQ528_RS08760 PF00696 Amino acid kinase family NQ528_RS08765 PF01765 Ribosome recycling factor NQ528_RS08770 PF01255 Putative undecaprenyl diphosphate synthase NQ528_RS08780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NQ528_RS08780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NQ528_RS08780 PF13288 DXP reductoisomerase C-terminal domain NQ528_RS08785 PF17820 PDZ domain NQ528_RS08785 PF02163 Peptidase family M50 NQ528_RS08790 PF04551 GcpE protein NQ528_RS08795 PF00929 Exonuclease NQ528_RS08795 PF02811 PHP domain NQ528_RS08795 PF14579 Helix-hairpin-helix motif NQ528_RS08795 PF11490 DNA polymerase III polC-type N-terminus II NQ528_RS08795 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQ528_RS08795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQ528_RS08800 PF13393 Histidyl-tRNA synthetase NQ528_RS08805 PF01634 ATP phosphoribosyltransferase NQ528_RS08810 PF00815 Histidinol dehydrogenase NQ528_RS08815 PF00155 Aminotransferase class I and II NQ528_RS08820 PF00475 Imidazoleglycerol-phosphate dehydratase NQ528_RS08825 PF00117 Glutamine amidotransferase class-I NQ528_RS08830 PF00977 Histidine biosynthesis protein NQ528_RS08835 PF00977 Histidine biosynthesis protein NQ528_RS08840 PF01502 Phosphoribosyl-AMP cyclohydrolase NQ528_RS08840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NQ528_RS08845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NQ528_RS08850 PF00696 Amino acid kinase family NQ528_RS08850 PF01842 ACT domain NQ528_RS08850 PF13840 ACT domain NQ528_RS08855 PF05173 Dihydrodipicolinate reductase, C-terminus NQ528_RS08855 PF01113 Dihydrodipicolinate reductase, N-terminus NQ528_RS08860 PF00701 Dihydrodipicolinate synthetase family NQ528_RS08865 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQ528_RS08865 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQ528_RS08870 PF02547 Queuosine biosynthesis protein NQ528_RS08875 PF01702 Queuine tRNA-ribosyltransferase NQ528_RS08880 PF02699 Preprotein translocase subunit NQ528_RS08905 PF02899 Phage integrase, N-terminal SAM-like domain NQ528_RS08905 PF00589 Phage integrase family NQ528_RS08910 PF00005 ABC transporter NQ528_RS08910 PF02687 FtsX-like permease family NQ528_RS08910 PF12704 MacB-like periplasmic core domain NQ528_RS08925 PF18073 Rubredoxin metal binding domain NQ528_RS08930 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_RS08935 PF03459 TOBE domain NQ528_RS08935 PF17912 MalK OB fold domain NQ528_RS08935 PF00005 ABC transporter NQ528_RS08940 PF00701 Dihydrodipicolinate synthetase family NQ528_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS08950 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS08960 PF01418 Helix-turn-helix domain, rpiR family NQ528_RS08960 PF01380 SIS domain NQ528_RS08965 PF00480 ROK family NQ528_RS08970 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NQ528_RS08995 PF02915 Rubrerythrin NQ528_RS09000 PF00890 FAD binding domain NQ528_RS09000 PF02910 Fumarate reductase flavoprotein C-term NQ528_RS09010 PF13411 MerR HTH family regulatory protein NQ528_RS09015 PF00857 Isochorismatase family NQ528_RS09020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NQ528_RS09025 PF00636 Ribonuclease III domain NQ528_RS09030 PF01926 50S ribosome-binding GTPase NQ528_RS09030 PF01018 GTP1/OBG NQ528_RS09030 PF09269 Domain of unknown function (DUF1967) NQ528_RS09035 PF01016 Ribosomal L27 protein NQ528_RS09040 PF00829 Ribosomal prokaryotic L21 protein NQ528_RS09045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NQ528_RS09045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NQ528_RS09050 PF01790 Prolipoprotein diacylglyceryl transferase NQ528_RS09055 PF05193 Peptidase M16 inactive domain NQ528_RS09055 PF00675 Insulinase (Peptidase family M16) NQ528_RS09065 PF10091 Putative glucoamylase NQ528_RS09065 PF06165 Glycosyltransferase family 36 NQ528_RS09065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NQ528_RS09070 PF01047 MarR family NQ528_RS09075 PF01979 Amidohydrolase family NQ528_RS09080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_RS09085 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS09090 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_RS09095 PF00005 ABC transporter NQ528_RS09095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS09100 PF00005 ABC transporter NQ528_RS09100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS09110 PF00890 FAD binding domain NQ528_RS09110 PF02910 Fumarate reductase flavoprotein C-term NQ528_RS09120 PF02570 Precorrin-8X methylmutase NQ528_RS09125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NQ528_RS09125 PF12557 Cob(I)alamin adenosyltransferase N terminal NQ528_RS09130 PF07685 CobB/CobQ-like glutamine amidotransferase domain NQ528_RS09135 PF00155 Aminotransferase class I and II NQ528_RS09140 PF03186 CobD/Cbib protein NQ528_RS09150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NQ528_RS09155 PF02654 Cobalamin-5-phosphate synthase NQ528_RS09160 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NQ528_RS09165 PF02277 Phosphoribosyltransferase NQ528_RS09170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NQ528_RS09170 PF07685 CobB/CobQ-like glutamine amidotransferase domain NQ528_RS09175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_RS09180 PF02571 Precorrin-6x reductase CbiJ/CobK NQ528_RS09185 PF11761 Cobalamin biosynthesis central region NQ528_RS09185 PF11760 Cobalamin synthesis G N-terminal NQ528_RS09185 PF01890 Cobalamin synthesis G C-terminus NQ528_RS09190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_RS09195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_RS09200 PF01888 CbiD NQ528_RS09210 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS09215 PF00005 ABC transporter NQ528_RS09225 PF00294 pfkB family carbohydrate kinase NQ528_RS09230 PF04542 Sigma-70 region 2 NQ528_RS09230 PF04539 Sigma-70 region 3 NQ528_RS09230 PF04545 Sigma-70, region 4 NQ528_RS09245 PF04542 Sigma-70 region 2 NQ528_RS09245 PF04545 Sigma-70, region 4 NQ528_RS09270 PF00731 AIR carboxylase NQ528_RS09275 PF01969 Protein of unknown function DUF111 NQ528_RS09285 PF00694 Aconitase C-terminal domain NQ528_RS09290 PF00330 Aconitase family (aconitate hydratase) NQ528_RS09295 PF08502 LeuA allosteric (dimerisation) domain NQ528_RS09295 PF00682 HMGL-like NQ528_RS09300 PF12822 ECF transporter, substrate-specific component NQ528_RS09305 PF00579 tRNA synthetases class I (W and Y) NQ528_RS09310 PF13476 AAA domain NQ528_RS09315 PF01316 Arginine repressor, DNA binding domain NQ528_RS09315 PF02863 Arginine repressor, C-terminal domain NQ528_RS09320 PF01513 ATP-NAD kinase NQ528_RS09325 PF01728 FtsJ-like methyltransferase NQ528_RS09325 PF01479 S4 domain NQ528_RS09330 PF02780 Transketolase, C-terminal domain NQ528_RS09330 PF02779 Transketolase, pyrimidine binding domain NQ528_RS09330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_RS09335 PF02681 Divergent PAP2 family NQ528_RS09340 PF00348 Polyprenyl synthetase NQ528_RS09345 PF02609 Exonuclease VII small subunit NQ528_RS09350 PF13742 OB-fold nucleic acid binding domain NQ528_RS09350 PF02601 Exonuclease VII, large subunit NQ528_RS09355 PF00814 Glycoprotease family NQ528_RS09360 PF01029 NusB family NQ528_RS09385 PF09546 Stage III sporulation protein AE (spore_III_AE) NQ528_RS09390 PF06686 Stage III sporulation protein AC/AD protein family NQ528_RS09395 PF06686 Stage III sporulation protein AC/AD protein family NQ528_RS09420 PF00501 AMP-binding enzyme NQ528_RS09420 PF13193 AMP-binding enzyme C-terminal domain NQ528_RS09430 PF13419 Haloacid dehalogenase-like hydrolase NQ528_RS09440 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_RS09440 PF17871 AAA lid domain NQ528_RS09440 PF07724 AAA domain (Cdc48 subfamily) NQ528_RS09440 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS09440 PF02861 Clp amino terminal domain, pathogenicity island component NQ528_RS09450 PF13416 Bacterial extracellular solute-binding protein NQ528_RS09455 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS09460 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS09465 PF08402 TOBE domain NQ528_RS09465 PF00005 ABC transporter NQ528_RS09475 PF00596 Class II Aldolase and Adducin N-terminal domain NQ528_RS09480 PF01261 Xylose isomerase-like TIM barrel NQ528_RS09490 PF00005 ABC transporter NQ528_RS09495 PF00005 ABC transporter NQ528_RS09495 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS09500 PF11862 Domain of unknown function (DUF3382) NQ528_RS09500 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS09505 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS09515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NQ528_RS09515 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NQ528_RS09515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NQ528_RS09520 PF00534 Glycosyl transferases group 1 NQ528_RS09520 PF13439 Glycosyltransferase Family 4 NQ528_RS09530 PF00682 HMGL-like NQ528_RS09530 PF08502 LeuA allosteric (dimerisation) domain NQ528_RS09545 PF00155 Aminotransferase class I and II NQ528_RS09550 PF01678 Diaminopimelate epimerase NQ528_RS09575 PF03949 Malic enzyme, NAD binding domain NQ528_RS09575 PF00390 Malic enzyme, N-terminal domain NQ528_RS09580 PF02811 PHP domain NQ528_RS09590 PF08299 Bacterial dnaA protein helix-turn-helix NQ528_RS09590 PF00308 Bacterial dnaA protein NQ528_RS09605 PF13193 AMP-binding enzyme C-terminal domain NQ528_RS09605 PF00501 AMP-binding enzyme NQ528_RS09620 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS09625 PF02153 Prephenate dehydrogenase NQ528_RS09630 PF01761 3-dehydroquinate synthase NQ528_RS09635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQ528_RS09640 PF01264 Chorismate synthase NQ528_RS09650 PF08335 GlnD PII-uridylyltransferase NQ528_RS09650 PF01966 HD domain NQ528_RS09650 PF01909 Nucleotidyltransferase domain NQ528_RS09670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_RS09670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_RS09675 PF01261 Xylose isomerase-like TIM barrel NQ528_RS09690 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_RS09700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_RS09700 PF01842 ACT domain NQ528_RS09700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_RS09705 PF00701 Dihydrodipicolinate synthetase family NQ528_RS09710 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS09715 PF01467 Cytidylyltransferase-like NQ528_RS09715 PF00294 pfkB family carbohydrate kinase NQ528_RS09720 PF13840 ACT domain NQ528_RS09720 PF01842 ACT domain NQ528_RS09720 PF00696 Amino acid kinase family NQ528_RS09725 PF00288 GHMP kinases N terminal domain NQ528_RS09725 PF08544 GHMP kinases C terminal NQ528_RS09730 PF01842 ACT domain NQ528_RS09730 PF03447 Homoserine dehydrogenase, NAD binding domain NQ528_RS09730 PF00742 Homoserine dehydrogenase NQ528_RS09735 PF01842 ACT domain NQ528_RS09760 PF03459 TOBE domain NQ528_RS09780 PF00571 CBS domain NQ528_RS09780 PF00478 IMP dehydrogenase / GMP reductase domain NQ528_RS09795 PF00248 Aldo/keto reductase family NQ528_RS09810 PF00072 Response regulator receiver domain NQ528_RS09810 PF08769 Sporulation initiation factor Spo0A C terminal NQ528_RS09815 PF17820 PDZ domain NQ528_RS09815 PF05580 SpoIVB peptidase S55 NQ528_RS09835 PF03323 Bacillus/Clostridium GerA spore germination protein NQ528_RS09840 PF04239 Protein of unknown function (DUF421) NQ528_RS09855 PF00285 Citrate synthase, C-terminal domain NQ528_RS09860 PF00730 HhH-GPD superfamily base excision DNA repair protein NQ528_RS09860 PF00633 Helix-hairpin-helix motif NQ528_RS09860 PF14815 NUDIX domain NQ528_RS09890 PF01515 Phosphate acetyl/butaryl transferase NQ528_RS09895 PF00871 Acetokinase family NQ528_RS09900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_RS09905 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_RS09905 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_RS09915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_RS09920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NQ528_RS09920 PF00056 lactate/malate dehydrogenase, NAD binding domain NQ528_RS09925 PF01546 Peptidase family M20/M25/M40 NQ528_RS09930 PF13085 2Fe-2S iron-sulfur cluster binding domain NQ528_RS09935 PF00890 FAD binding domain NQ528_RS09935 PF02910 Fumarate reductase flavoprotein C-term NQ528_RS09945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NQ528_RS09945 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NQ528_RS09955 PF03480 Bacterial extracellular solute-binding protein, family 7 NQ528_RS09960 PF01614 Bacterial transcriptional regulator NQ528_RS09960 PF09339 IclR helix-turn-helix domain NQ528_RS09965 PF00209 Sodium:neurotransmitter symporter family NQ528_RS09975 PF03352 Methyladenine glycosylase NQ528_RS09980 PF01938 TRAM domain NQ528_RS09980 PF05958 tRNA (Uracil-5-)-methyltransferase NQ528_RS10000 PF12704 MacB-like periplasmic core domain NQ528_RS10000 PF02687 FtsX-like permease family NQ528_RS10010 PF01554 MatE NQ528_RS10035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS10035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS10040 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS10045 PF00005 ABC transporter NQ528_RS10050 PF13407 Periplasmic binding protein domain NQ528_RS10065 PF03144 Elongation factor Tu domain 2 NQ528_RS10065 PF00009 Elongation factor Tu GTP binding domain NQ528_RS10065 PF16658 Class II release factor RF3, C-terminal domain NQ528_RS10070 PF00583 Acetyltransferase (GNAT) family NQ528_RS10070 PF13508 Acetyltransferase (GNAT) domain NQ528_RS10075 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS10075 PF07724 AAA domain (Cdc48 subfamily) NQ528_RS10075 PF17871 AAA lid domain NQ528_RS10075 PF02861 Clp amino terminal domain, pathogenicity island component NQ528_RS10075 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_RS10090 PF13419 Haloacid dehalogenase-like hydrolase NQ528_RS10095 PF01235 Sodium:alanine symporter family NQ528_RS10100 PF01817 Chorismate mutase type II NQ528_RS10100 PF00800 Prephenate dehydratase NQ528_RS10105 PF18152 DAHP synthase ferredoxin-like domain NQ528_RS10105 PF00793 DAHP synthetase I family NQ528_RS10110 PF00654 Voltage gated chloride channel NQ528_RS10120 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NQ528_RS10130 PF04542 Sigma-70 region 2 NQ528_RS10130 PF08281 Sigma-70, region 4 NQ528_RS10140 PF02844 Phosphoribosylglycinamide synthetase, N domain NQ528_RS10140 PF02843 Phosphoribosylglycinamide synthetase, C domain NQ528_RS10140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NQ528_RS10145 PF01808 AICARFT/IMPCHase bienzyme NQ528_RS10145 PF02142 MGS-like domain NQ528_RS10155 PF00551 Formyl transferase NQ528_RS10160 PF00586 AIR synthase related protein, N-terminal domain NQ528_RS10160 PF02769 AIR synthase related protein, C-terminal domain NQ528_RS10165 PF00156 Phosphoribosyl transferase domain NQ528_RS10170 PF01259 SAICAR synthetase NQ528_RS10175 PF00731 AIR carboxylase NQ528_RS10190 PF00664 ABC transporter transmembrane region NQ528_RS10190 PF00005 ABC transporter NQ528_RS10200 PF00375 Sodium:dicarboxylate symporter family NQ528_RS10205 PF03313 Serine dehydratase alpha chain NQ528_RS10210 PF13188 PAS domain NQ528_RS10210 PF02954 Bacterial regulatory protein, Fis family NQ528_RS10210 PF00158 Sigma-54 interaction domain NQ528_RS10225 PF00535 Glycosyl transferase family 2 NQ528_RS10230 PF03275 UDP-galactopyranose mutase NQ528_RS10245 PF01880 Desulfoferrodoxin NQ528_RS10280 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS10295 PF00072 Response regulator receiver domain NQ528_RS10295 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS10300 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS10315 PF03328 HpcH/HpaI aldolase/citrate lyase family NQ528_RS10320 PF02441 Flavoprotein NQ528_RS10335 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_RS10335 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_RS10340 PF04026 SpoVG NQ528_RS10345 PF01225 Mur ligase family, catalytic domain NQ528_RS10345 PF02875 Mur ligase family, glutamate ligase domain NQ528_RS10345 PF08245 Mur ligase middle domain NQ528_RS10355 PF01380 SIS domain NQ528_RS10360 PF01177 Asp/Glu/Hydantoin racemase NQ528_RS10375 PF17763 Glutaminase/Asparaginase C-terminal domain NQ528_RS10375 PF00710 Asparaginase, N-terminal NQ528_RS10380 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS10390 PF13237 4Fe-4S dicluster domain NQ528_RS10390 PF00766 Electron transfer flavoprotein FAD-binding domain NQ528_RS10390 PF01012 Electron transfer flavoprotein domain NQ528_RS10395 PF01012 Electron transfer flavoprotein domain NQ528_RS10400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQ528_RS10400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQ528_RS10400 PF02770 Acyl-CoA dehydrogenase, middle domain NQ528_RS10405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NQ528_RS10405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NQ528_RS10410 PF00378 Enoyl-CoA hydratase/isomerase NQ528_RS10415 PF00108 Thiolase, N-terminal domain NQ528_RS10415 PF02803 Thiolase, C-terminal domain NQ528_RS10430 PF13673 Acetyltransferase (GNAT) domain NQ528_RS10430 PF04229 GrpB protein NQ528_RS10435 PF01261 Xylose isomerase-like TIM barrel NQ528_RS10445 PF00672 HAMP domain NQ528_RS10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS10445 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS10445 PF00989 PAS fold NQ528_RS10450 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS10450 PF00072 Response regulator receiver domain NQ528_RS10465 PF01084 Ribosomal protein S18 NQ528_RS10470 PF00436 Single-strand binding protein family NQ528_RS10475 PF01250 Ribosomal protein S6 NQ528_RS10485 PF02625 XdhC and CoxI family NQ528_RS10485 PF13478 XdhC Rossmann domain NQ528_RS10490 PF13478 XdhC Rossmann domain NQ528_RS10490 PF02625 XdhC and CoxI family NQ528_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS10500 PF03466 LysR substrate binding domain NQ528_RS10525 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_RS10525 PF13291 ACT domain NQ528_RS10540 PF12833 Helix-turn-helix domain NQ528_RS10540 PF02311 AraC-like ligand binding domain NQ528_RS10555 PF03313 Serine dehydratase alpha chain NQ528_RS10565 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS10570 PF11862 Domain of unknown function (DUF3382) NQ528_RS10570 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS10575 PF00005 ABC transporter NQ528_RS10575 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS10580 PF00005 ABC transporter NQ528_RS10585 PF02733 Dak1 domain NQ528_RS10590 PF02734 DAK2 domain NQ528_RS10595 PF02954 Bacterial regulatory protein, Fis family NQ528_RS10595 PF00158 Sigma-54 interaction domain NQ528_RS10595 PF13188 PAS domain NQ528_RS10605 PF01584 CheW-like domain NQ528_RS10605 PF00072 Response regulator receiver domain NQ528_RS10635 PF00708 Acylphosphatase NQ528_RS10640 PF03976 Polyphosphate kinase 2 (PPK2) NQ528_RS10645 PF01648 4'-phosphopantetheinyl transferase superfamily NQ528_RS10650 PF13847 Methyltransferase domain NQ528_RS10680 PF00005 ABC transporter NQ528_RS10685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NQ528_RS10685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NQ528_RS10710 PF01554 MatE NQ528_RS10715 PF00860 Permease family NQ528_RS10720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_RS10720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_RS10725 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_RS10725 PF01799 [2Fe-2S] binding domain NQ528_RS10740 PF02515 CoA-transferase family III NQ528_RS10745 PF01425 Amidase NQ528_RS10750 PF01039 Carboxyl transferase domain NQ528_RS10755 PF07905 Purine catabolism regulatory protein-like family NQ528_RS10755 PF17853 GGDEF-like domain NQ528_RS10755 PF13556 PucR C-terminal helix-turn-helix domain NQ528_RS10765 PF02629 CoA binding domain NQ528_RS10765 PF00549 CoA-ligase NQ528_RS10775 PF06545 Protein of unknown function (DUF1116) NQ528_RS10790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_RS10790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS10795 PF00989 PAS fold NQ528_RS10795 PF16736 Single Cache-like NQ528_RS10795 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS10800 PF00072 Response regulator receiver domain NQ528_RS10800 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS10805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQ528_RS10810 PF00873 AcrB/AcrD/AcrF family NQ528_RS10815 PF00689 Cation transporting ATPase, C-terminus NQ528_RS10815 PF00690 Cation transporter/ATPase, N-terminus NQ528_RS10825 PF00672 HAMP domain NQ528_RS10825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS10825 PF02203 Tar ligand binding domain homologue NQ528_RS10835 PF03975 CheD chemotactic sensory transduction NQ528_RS10840 PF04509 CheC-like family NQ528_RS10845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQ528_RS10845 PF00460 Flagella basal body rod protein NQ528_RS10850 PF00460 Flagella basal body rod protein NQ528_RS10850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQ528_RS10855 PF04542 Sigma-70 region 2 NQ528_RS10855 PF04539 Sigma-70 region 3 NQ528_RS10855 PF04545 Sigma-70, region 4 NQ528_RS10860 PF00771 FHIPEP family NQ528_RS10870 PF01311 Bacterial export proteins, family 1 NQ528_RS10875 PF01313 Bacterial export proteins, family 3 NQ528_RS10880 PF00813 FliP family NQ528_RS10890 PF00072 Response regulator receiver domain NQ528_RS10895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQ528_RS10895 PF04509 CheC-like family NQ528_RS10900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQ528_RS10900 PF02154 Flagellar motor switch protein FliM NQ528_RS10905 PF00691 OmpA family NQ528_RS10905 PF13677 Membrane MotB of proton-channel complex MotA/MotB NQ528_RS10910 PF01618 MotA/TolQ/ExbB proton channel family NQ528_RS10915 PF06289 Flagellar and Swarming motility proteins NQ528_RS10920 PF07559 Flagellar basal body protein FlaE NQ528_RS10920 PF00460 Flagella basal body rod protein NQ528_RS10920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQ528_RS10930 PF03963 Flagellar hook capping protein - N-terminal region NQ528_RS10945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQ528_RS10945 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQ528_RS10945 PF18269 T3SS EscN ATPase C-terminal domain NQ528_RS10955 PF01706 FliG C-terminal domain NQ528_RS10955 PF14841 FliG middle domain NQ528_RS10955 PF14842 FliG N-terminal domain NQ528_RS10965 PF02049 Flagellar hook-basal body complex protein FliE NQ528_RS10980 PF00460 Flagella basal body rod protein NQ528_RS11000 PF07195 Flagellar hook-associated protein 2 C-terminus NQ528_RS11000 PF07196 Flagellin hook IN motif NQ528_RS11000 PF02465 Flagellar hook-associated protein 2 N-terminus NQ528_RS11015 PF02599 Global regulator protein family NQ528_RS11020 PF02623 FliW protein NQ528_RS11030 PF00700 Bacterial flagellin C-terminal helical region NQ528_RS11030 PF00669 Bacterial flagellin N-terminal helical region NQ528_RS11050 PF13614 AAA domain NQ528_RS11075 PF00700 Bacterial flagellin C-terminal helical region NQ528_RS11075 PF00669 Bacterial flagellin N-terminal helical region NQ528_RS11075 PF00700 Bacterial flagellin C-terminal helical region NQ528_RS11075 PF00669 Bacterial flagellin N-terminal helical region NQ528_RS11080 PF00672 HAMP domain NQ528_RS11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS11080 PF02203 Tar ligand binding domain homologue NQ528_RS11085 PF00563 EAL domain NQ528_RS11085 PF08668 HDOD domain NQ528_RS11090 PF02491 SHS2 domain inserted in FTSA NQ528_RS11110 PF01584 CheW-like domain NQ528_RS11110 PF02895 Signal transducing histidine kinase, homodimeric domain NQ528_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS11110 PF01627 Hpt domain NQ528_RS11110 PF07194 P2 response regulator binding domain NQ528_RS11115 PF01584 CheW-like domain NQ528_RS11120 PF01739 CheR methyltransferase, SAM binding domain NQ528_RS11120 PF03705 CheR methyltransferase, all-alpha domain NQ528_RS11125 PF01339 CheB methylesterase NQ528_RS11125 PF00072 Response regulator receiver domain NQ528_RS11135 PF01139 tRNA-splicing ligase RtcB NQ528_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS11150 PF00005 ABC transporter NQ528_RS11155 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS11165 PF00005 ABC transporter NQ528_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS11180 PF02872 5'-nucleotidase, C-terminal domain NQ528_RS11180 PF00149 Calcineurin-like phosphoesterase NQ528_RS11185 PF00459 Inositol monophosphatase family NQ528_RS11190 PF13932 GidA associated domain NQ528_RS11190 PF01134 Glucose inhibited division protein A NQ528_RS11195 PF01522 Polysaccharide deacetylase NQ528_RS11205 PF00689 Cation transporting ATPase, C-terminus NQ528_RS11205 PF00690 Cation transporter/ATPase, N-terminus NQ528_RS11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS11225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQ528_RS11225 PF13247 4Fe-4S dicluster domain NQ528_RS11230 PF00384 Molybdopterin oxidoreductase NQ528_RS11230 PF01568 Molydopterin dinucleotide binding domain NQ528_RS11230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQ528_RS11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS11235 PF14759 Reductase C-terminal NQ528_RS11255 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS11260 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS11265 PF00005 ABC transporter NQ528_RS11270 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_RS11275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NQ528_RS11285 PF11230 Protein of unknown function (DUF3029) NQ528_RS11290 PF04055 Radical SAM superfamily NQ528_RS11295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NQ528_RS11305 PF03853 YjeF-related protein N-terminus NQ528_RS11305 PF01256 Carbohydrate kinase NQ528_RS11315 PF00118 TCP-1/cpn60 chaperonin family NQ528_RS11320 PF00166 Chaperonin 10 Kd subunit NQ528_RS11325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_RS11325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_RS11330 PF12822 ECF transporter, substrate-specific component NQ528_RS11335 PF01226 Formate/nitrite transporter NQ528_RS11365 PF13407 Periplasmic binding protein domain NQ528_RS11370 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS11375 PF00005 ABC transporter NQ528_RS11390 PF00455 DeoR C terminal sensor domain NQ528_RS11390 PF08220 DeoR-like helix-turn-helix domain NQ528_RS11400 PF03454 MoeA C-terminal region (domain IV) NQ528_RS11400 PF03453 MoeA N-terminal region (domain I and II) NQ528_RS11400 PF00994 Probable molybdopterin binding domain NQ528_RS11405 PF04474 Protein of unknown function (DUF554) NQ528_RS11410 PF12804 MobA-like NTP transferase domain NQ528_RS11415 PF00210 Ferritin-like domain NQ528_RS11420 PF01906 Putative heavy-metal-binding NQ528_RS11425 PF01381 Helix-turn-helix NQ528_RS11450 PF02743 Cache domain NQ528_RS11450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS11450 PF00672 HAMP domain NQ528_RS11460 PF02110 Hydroxyethylthiazole kinase family NQ528_RS11465 PF02581 Thiamine monophosphate synthase NQ528_RS11470 PF13419 Haloacid dehalogenase-like hydrolase NQ528_RS11475 PF08543 Phosphomethylpyrimidine kinase NQ528_RS11475 PF02581 Thiamine monophosphate synthase NQ528_RS11485 PF16916 Dimerisation domain of Zinc Transporter NQ528_RS11485 PF01545 Cation efflux family NQ528_RS11500 PF03176 MMPL family NQ528_RS11520 PF04070 Domain of unknown function (DUF378) NQ528_RS11530 PF00117 Glutamine amidotransferase class-I NQ528_RS11530 PF00958 GMP synthase C terminal domain NQ528_RS11530 PF02540 NAD synthase NQ528_RS11535 PF00005 ABC transporter NQ528_RS11545 PF02553 Cobalt transport protein component CbiN NQ528_RS11550 PF01891 Cobalt uptake substrate-specific transmembrane region NQ528_RS11565 PF04542 Sigma-70 region 2 NQ528_RS11565 PF04539 Sigma-70 region 3 NQ528_RS11565 PF04545 Sigma-70, region 4 NQ528_RS11570 PF13581 Histidine kinase-like ATPase domain NQ528_RS11575 PF01740 STAS domain NQ528_RS11580 PF02875 Mur ligase family, glutamate ligase domain NQ528_RS11580 PF08245 Mur ligase middle domain NQ528_RS11585 PF10458 Valyl tRNA synthetase tRNA binding arm NQ528_RS11585 PF00133 tRNA synthetases class I (I, L, M and V) NQ528_RS11585 PF08264 Anticodon-binding domain of tRNA NQ528_RS11590 PF01551 Peptidase family M23 NQ528_RS11590 PF10145 Phage-related minor tail protein NQ528_RS11590 PF01464 Transglycosylase SLT domain NQ528_RS11595 PF02607 B12 binding domain NQ528_RS11595 PF02310 B12 binding domain NQ528_RS11600 PF18152 DAHP synthase ferredoxin-like domain NQ528_RS11600 PF00793 DAHP synthetase I family NQ528_RS11655 PF00270 DEAD/DEAH box helicase NQ528_RS11655 PF13749 Putative ATP-dependent DNA helicase recG C-terminal NQ528_RS11655 PF17191 RecG wedge domain NQ528_RS11705 PF03389 MobA/MobL family NQ528_RS11715 PF05598 Transposase domain (DUF772) NQ528_RS11715 PF01609 Transposase DDE domain NQ528_RS11730 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS11735 PF00005 ABC transporter NQ528_RS11740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_RS11750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQ528_RS11755 PF00294 pfkB family carbohydrate kinase NQ528_RS11785 PF03009 Glycerophosphoryl diester phosphodiesterase family NQ528_RS11790 PF00288 GHMP kinases N terminal domain NQ528_RS11790 PF08544 GHMP kinases C terminal NQ528_RS11795 PF04015 Domain of unknown function (DUF362) NQ528_RS11800 PF01784 NIF3 (NGG1p interacting factor 3) NQ528_RS11825 PF08281 Sigma-70, region 4 NQ528_RS11825 PF04542 Sigma-70 region 2 NQ528_RS11830 PF01554 MatE NQ528_RS11835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQ528_RS11840 PF08671 Anti-repressor SinI NQ528_RS11840 PF01381 Helix-turn-helix NQ528_RS11845 PF01741 Large-conductance mechanosensitive channel, MscL NQ528_RS11855 PF01053 Cys/Met metabolism PLP-dependent enzyme NQ528_RS11860 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_RS11865 PF02082 Transcriptional regulator NQ528_RS11875 PF01544 CorA-like Mg2+ transporter protein NQ528_RS11885 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS11895 PF02780 Transketolase, C-terminal domain NQ528_RS11895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_RS11895 PF02779 Transketolase, pyrimidine binding domain NQ528_RS11900 PF02780 Transketolase, C-terminal domain NQ528_RS11900 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_RS11900 PF02779 Transketolase, pyrimidine binding domain NQ528_RS11905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_RS11915 PF00571 CBS domain NQ528_RS11915 PF01380 SIS domain NQ528_RS11920 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS11925 PF00005 ABC transporter NQ528_RS11930 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS11935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_RS11935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_RS11940 PF00294 pfkB family carbohydrate kinase NQ528_RS11945 PF01658 Myo-inositol-1-phosphate synthase NQ528_RS12040 PF02811 PHP domain NQ528_RS12040 PF00929 Exonuclease NQ528_RS12040 PF14579 Helix-hairpin-helix motif NQ528_RS12040 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQ528_RS12040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQ528_RS12040 PF11490 DNA polymerase III polC-type N-terminus II NQ528_RS12050 PF00145 C-5 cytosine-specific DNA methylase NQ528_RS12075 PF00436 Single-strand binding protein family NQ528_RS12085 PF01695 IstB-like ATP binding protein NQ528_RS12180 PF00574 Clp protease NQ528_RS12300 PF01183 Glycosyl hydrolases family 25 NQ528_RS12300 PF01471 Putative peptidoglycan binding domain NQ528_RS12315 PF01668 SmpB protein NQ528_RS12320 PF04138 GtrA-like protein NQ528_RS12325 PF02132 RecR protein NQ528_RS12325 PF13662 Toprim domain NQ528_RS12330 PF02575 YbaB/EbfC DNA-binding family NQ528_RS12335 PF12169 DNA polymerase III subunits gamma and tau domain III NQ528_RS12345 PF02645 Uncharacterised protein, DegV family COG1307 NQ528_RS12350 PF03717 Penicillin-binding Protein dimerisation domain NQ528_RS12350 PF00905 Penicillin binding protein transpeptidase domain NQ528_RS12355 PF01381 Helix-turn-helix NQ528_RS12370 PF00483 Nucleotidyl transferase NQ528_RS12380 PF00472 RF-1 domain NQ528_RS12380 PF03462 PCRF domain NQ528_RS12425 PF01381 Helix-turn-helix NQ528_RS12445 PF03932 CutC family NQ528_RS12460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NQ528_RS12460 PF01409 tRNA synthetases class II core domain (F) NQ528_RS12465 PF03483 B3/4 domain NQ528_RS12465 PF03484 tRNA synthetase B5 domain NQ528_RS12465 PF03147 Ferredoxin-fold anticodon binding domain NQ528_RS12465 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NQ528_RS12465 PF01588 Putative tRNA binding domain NQ528_RS12470 PF06135 IreB regulatory phosphoprotein NQ528_RS12480 PF01381 Helix-turn-helix NQ528_RS12485 PF00962 Adenosine/AMP deaminase NQ528_RS12495 PF00488 MutS domain V NQ528_RS12495 PF01713 Smr domain NQ528_RS12500 PF02565 Recombination protein O C terminal NQ528_RS12500 PF11967 Recombination protein O N terminal NQ528_RS12510 PF07650 KH domain NQ528_RS12510 PF01926 50S ribosome-binding GTPase NQ528_RS12515 PF01219 Prokaryotic diacylglycerol kinase NQ528_RS12520 PF02130 Uncharacterized protein family UPF0054 NQ528_RS12525 PF02562 PhoH-like protein NQ528_RS12550 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_RS12550 PF08239 Bacterial SH3 domain NQ528_RS12555 PF00209 Sodium:neurotransmitter symporter family NQ528_RS12560 PF01212 Beta-eliminating lyase NQ528_RS12565 PF01042 Endoribonuclease L-PSP NQ528_RS12570 PF08348 YheO-like PAS domain NQ528_RS12570 PF13309 HTH domain NQ528_RS12585 PF04073 Aminoacyl-tRNA editing domain NQ528_RS12595 PF14535 AMP-binding enzyme C-terminal domain NQ528_RS12595 PF00501 AMP-binding enzyme NQ528_RS12610 PF00501 AMP-binding enzyme NQ528_RS12610 PF14535 AMP-binding enzyme C-terminal domain NQ528_RS12620 PF00226 DnaJ domain NQ528_RS12620 PF01556 DnaJ C terminal domain NQ528_RS12620 PF00684 DnaJ central domain NQ528_RS12645 PF00809 Pterin binding enzyme NQ528_RS12645 PF02965 Vitamin B12 dependent methionine synthase, activation domain NQ528_RS12645 PF02574 Homocysteine S-methyltransferase NQ528_RS12645 PF02607 B12 binding domain NQ528_RS12645 PF02310 B12 binding domain NQ528_RS12650 PF02219 Methylenetetrahydrofolate reductase NQ528_RS12650 PF02574 Homocysteine S-methyltransferase NQ528_RS12660 PF00005 ABC transporter NQ528_RS12660 PF00664 ABC transporter transmembrane region NQ528_RS12665 PF00664 ABC transporter transmembrane region NQ528_RS12665 PF00005 ABC transporter NQ528_RS12690 PF00294 pfkB family carbohydrate kinase NQ528_RS12695 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS12695 PF17862 AAA+ lid domain NQ528_RS12695 PF06480 FtsH Extracellular NQ528_RS12695 PF01434 Peptidase family M41 NQ528_RS12700 PF00156 Phosphoribosyl transferase domain NQ528_RS12705 PF01171 PP-loop family NQ528_RS12705 PF11734 TilS substrate C-terminal domain NQ528_RS12710 PF00772 DnaB-like helicase N terminal domain NQ528_RS12710 PF03796 DnaB-like helicase C terminal domain NQ528_RS12715 PF03948 Ribosomal protein L9, C-terminal domain NQ528_RS12715 PF01281 Ribosomal protein L9, N-terminal domain NQ528_RS12720 PF01368 DHH family NQ528_RS12720 PF02272 DHHA1 domain NQ528_RS12745 PF00753 Metallo-beta-lactamase superfamily NQ528_RS12745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NQ528_RS12745 PF17770 Ribonuclease J C-terminal domain NQ528_RS12750 PF00483 Nucleotidyl transferase NQ528_RS12755 PF00075 RNase H NQ528_RS12760 PF00266 Aminotransferase class-V NQ528_RS12765 PF01592 NifU-like N terminal domain NQ528_RS12790 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_RS12790 PF12464 Maltose acetyltransferase NQ528_RS12800 PF02082 Transcriptional regulator NQ528_RS12810 PF04539 Sigma-70 region 3 NQ528_RS12810 PF00140 Sigma-70 factor, region 1.2 NQ528_RS12810 PF03979 Sigma-70 factor, region 1.1 NQ528_RS12810 PF04545 Sigma-70, region 4 NQ528_RS12810 PF04542 Sigma-70 region 2 NQ528_RS12815 PF10410 DnaB-helicase binding domain of primase NQ528_RS12815 PF08275 DNA primase catalytic core, N-terminal domain NQ528_RS12815 PF01807 CHC2 zinc finger NQ528_RS12820 PF01966 HD domain NQ528_RS12820 PF13286 Phosphohydrolase-associated domain NQ528_RS12825 PF09186 Domain of unknown function (DUF1949) NQ528_RS12825 PF01205 Uncharacterized protein family UPF0029 NQ528_RS12830 PF01063 Amino-transferase class IV NQ528_RS12845 PF13673 Acetyltransferase (GNAT) domain NQ528_RS12850 PF13378 Enolase C-terminal domain-like NQ528_RS12850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_RS12860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NQ528_RS12860 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_RS12860 PF08501 Shikimate dehydrogenase substrate binding domain NQ528_RS12865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NQ528_RS12865 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_RS12870 PF07729 FCD domain NQ528_RS12870 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS12875 PF00072 Response regulator receiver domain NQ528_RS12875 PF12833 Helix-turn-helix domain NQ528_RS12880 PF06580 Histidine kinase NQ528_RS12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS12880 PF00672 HAMP domain NQ528_RS12880 PF02743 Cache domain NQ528_RS12885 PF13458 Periplasmic binding protein NQ528_RS12890 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS12895 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS12895 PF11862 Domain of unknown function (DUF3382) NQ528_RS12900 PF00005 ABC transporter NQ528_RS12900 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_RS12905 PF00005 ABC transporter NQ528_RS12910 PF01261 Xylose isomerase-like TIM barrel NQ528_RS12920 PF03989 DNA gyrase C-terminal domain, beta-propeller NQ528_RS12920 PF00521 DNA gyrase/topoisomerase IV, subunit A NQ528_RS12925 PF01751 Toprim domain NQ528_RS12925 PF00986 DNA gyrase B subunit, carboxyl terminus NQ528_RS12925 PF00204 DNA gyrase B NQ528_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS12930 PF00583 Acetyltransferase (GNAT) family NQ528_RS12935 PF02503 Polyphosphate kinase middle domain NQ528_RS12935 PF13090 Polyphosphate kinase C-terminal domain 2 NQ528_RS12935 PF17941 Polyphosphate kinase C-terminal domain 1 NQ528_RS12935 PF13089 Polyphosphate kinase N-terminal domain NQ528_RS12940 PF12327 FtsZ family, C-terminal domain NQ528_RS12940 PF00091 Tubulin/FtsZ family, GTPase domain NQ528_RS12950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQ528_RS12955 PF03033 Glycosyltransferase family 28 N-terminal domain NQ528_RS12955 PF04101 Glycosyltransferase family 28 C-terminal domain NQ528_RS12960 PF01098 Cell cycle protein NQ528_RS12965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NQ528_RS12965 PF00953 Glycosyl transferase family 4 NQ528_RS12970 PF01225 Mur ligase family, catalytic domain NQ528_RS12970 PF02875 Mur ligase family, glutamate ligase domain NQ528_RS12970 PF08245 Mur ligase middle domain NQ528_RS12975 PF01225 Mur ligase family, catalytic domain NQ528_RS12975 PF02875 Mur ligase family, glutamate ligase domain NQ528_RS12975 PF08245 Mur ligase middle domain NQ528_RS12980 PF00905 Penicillin binding protein transpeptidase domain NQ528_RS12980 PF03793 PASTA domain NQ528_RS12980 PF03717 Penicillin-binding Protein dimerisation domain NQ528_RS12990 PF01795 MraW methylase family NQ528_RS12995 PF02381 MraZ protein, putative antitoxin-like NQ528_RS13000 PF01709 Transcriptional regulator NQ528_RS13005 PF01136 Peptidase family U32 NQ528_RS13005 PF16325 Peptidase family U32 C-terminal domain NQ528_RS13010 PF02618 YceG-like family NQ528_RS13030 PF01812 5-formyltetrahydrofolate cyclo-ligase family NQ528_RS13035 PF01965 DJ-1/PfpI family NQ528_RS13050 PF02223 Thymidylate kinase NQ528_RS13055 PF02511 Thymidylate synthase complementing protein NQ528_RS13070 PF00580 UvrD/REP helicase N-terminal domain NQ528_RS13070 PF13361 UvrD-like helicase C-terminal domain NQ528_RS13075 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NQ528_RS13085 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NQ528_RS13085 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NQ528_RS13090 PF00288 GHMP kinases N terminal domain NQ528_RS13090 PF08544 GHMP kinases C terminal NQ528_RS13090 PF10509 Galactokinase galactose-binding signature NQ528_RS13095 PF02311 AraC-like ligand binding domain NQ528_RS13095 PF12833 Helix-turn-helix domain NQ528_RS13100 PF05552 Conserved TM helix NQ528_RS13100 PF00924 Mechanosensitive ion channel NQ528_RS13125 PF00156 Phosphoribosyl transferase domain NQ528_RS13125 PF13537 Glutamine amidotransferase domain NQ528_RS13130 PF14490 Helix-hairpin-helix containing domain NQ528_RS13130 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NQ528_RS13130 PF13538 UvrD-like helicase C-terminal domain NQ528_RS13140 PF02773 S-adenosylmethionine synthetase, C-terminal domain NQ528_RS13140 PF02772 S-adenosylmethionine synthetase, central domain NQ528_RS13140 PF00438 S-adenosylmethionine synthetase, N-terminal domain NQ528_RS13145 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_RS13150 PF12822 ECF transporter, substrate-specific component NQ528_RS13155 PF00009 Elongation factor Tu GTP binding domain NQ528_RS13155 PF03144 Elongation factor Tu domain 2 NQ528_RS13155 PF03143 Elongation factor Tu C-terminal domain NQ528_RS13160 PF14492 Elongation Factor G, domain II NQ528_RS13160 PF00679 Elongation factor G C-terminus NQ528_RS13160 PF00009 Elongation factor Tu GTP binding domain NQ528_RS13160 PF03144 Elongation factor Tu domain 2 NQ528_RS13160 PF03764 Elongation factor G, domain IV NQ528_RS13165 PF00177 Ribosomal protein S7p/S5e NQ528_RS13170 PF00164 Ribosomal protein S12/S23 NQ528_RS13175 PF04998 RNA polymerase Rpb1, domain 5 NQ528_RS13175 PF04983 RNA polymerase Rpb1, domain 3 NQ528_RS13175 PF05000 RNA polymerase Rpb1, domain 4 NQ528_RS13175 PF04997 RNA polymerase Rpb1, domain 1 NQ528_RS13175 PF00623 RNA polymerase Rpb1, domain 2 NQ528_RS13180 PF04563 RNA polymerase beta subunit NQ528_RS13180 PF04560 RNA polymerase Rpb2, domain 7 NQ528_RS13180 PF10385 RNA polymerase beta subunit external 1 domain NQ528_RS13180 PF00562 RNA polymerase Rpb2, domain 6 NQ528_RS13180 PF04561 RNA polymerase Rpb2, domain 2 NQ528_RS13180 PF04565 RNA polymerase Rpb2, domain 3 NQ528_RS13185 PF03956 Lysine exporter LysO NQ528_RS13195 PF02127 Aminopeptidase I zinc metalloprotease (M18) NQ528_RS13200 PF01551 Peptidase family M23 NQ528_RS13200 PF10145 Phage-related minor tail protein NQ528_RS13200 PF01464 Transglycosylase SLT domain NQ528_RS13205 PF01121 Dephospho-CoA kinase NQ528_RS13210 PF03481 Putative GTP-binding controlling metal-binding NQ528_RS13210 PF01300 Telomere recombination NQ528_RS13215 PF00472 RF-1 domain NQ528_RS13215 PF03462 PCRF domain NQ528_RS13220 PF06107 Bacterial protein of unknown function (DUF951) NQ528_RS13225 PF00575 S1 RNA binding domain NQ528_RS13225 PF00013 KH domain NQ528_RS13225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NQ528_RS13225 PF01138 3' exoribonuclease family, domain 1 NQ528_RS13225 PF03725 3' exoribonuclease family, domain 2 NQ528_RS13230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_RS13235 PF12002 MgsA AAA+ ATPase C terminal NQ528_RS13235 PF05496 Holliday junction DNA helicase RuvB P-loop domain NQ528_RS13235 PF16193 AAA C-terminal domain NQ528_RS13240 PF00464 Serine hydroxymethyltransferase NQ528_RS13255 PF01980 tRNA-methyltransferase O NQ528_RS13255 PF18389 TrmO C-terminal domain NQ528_RS13260 PF07883 Cupin domain NQ528_RS13265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS13265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS13270 PF04198 Putative sugar-binding domain NQ528_RS13275 PF00005 ABC transporter NQ528_RS13280 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS13285 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS13295 PF01791 DeoC/LacD family aldolase NQ528_RS13315 PF00294 pfkB family carbohydrate kinase NQ528_RS13380 PF04204 Homoserine O-succinyltransferase NQ528_RS13385 PF01209 ubiE/COQ5 methyltransferase family NQ528_RS13400 PF13941 MutL protein NQ528_RS13405 PF04303 PrpF protein NQ528_RS13410 PF02310 B12 binding domain NQ528_RS13415 PF00694 Aconitase C-terminal domain NQ528_RS13420 PF00330 Aconitase family (aconitate hydratase) NQ528_RS13425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_RS13425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_RS13430 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_RS13430 PF01799 [2Fe-2S] binding domain NQ528_RS13435 PF03450 CO dehydrogenase flavoprotein C-terminal domain NQ528_RS13435 PF00941 FAD binding domain in molybdopterin dehydrogenase NQ528_RS13440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NQ528_RS13440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NQ528_RS13455 PF00037 4Fe-4S binding domain NQ528_RS13460 PF01979 Amidohydrolase family NQ528_RS13470 PF03466 LysR substrate binding domain NQ528_RS13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS13485 PF00871 Acetokinase family NQ528_RS13490 PF05636 HIGH Nucleotidyl Transferase NQ528_RS13510 PF13732 Domain of unknown function (DUF4162) NQ528_RS13510 PF00005 ABC transporter NQ528_RS13630 PF00437 Type II/IV secretion system protein NQ528_RS13730 PF13173 AAA domain NQ528_RS13730 PF13635 Domain of unknown function (DUF4143) NQ528_RS13775 PF00005 ABC transporter NQ528_RS13795 PF00072 Response regulator receiver domain NQ528_RS13795 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS13805 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS13805 PF00072 Response regulator receiver domain NQ528_RS13810 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS13815 PF00005 ABC transporter NQ528_RS13815 PF02687 FtsX-like permease family NQ528_RS13815 PF12704 MacB-like periplasmic core domain NQ528_RS13820 PF02687 FtsX-like permease family NQ528_RS13820 PF12704 MacB-like periplasmic core domain NQ528_RS13825 PF00005 ABC transporter NQ528_RS13825 PF02687 FtsX-like permease family NQ528_RS13825 PF12704 MacB-like periplasmic core domain NQ528_RS13835 PF02687 FtsX-like permease family NQ528_RS13835 PF12704 MacB-like periplasmic core domain NQ528_RS13850 PF01554 MatE NQ528_RS13855 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS13855 PF00072 Response regulator receiver domain NQ528_RS13870 PF06908 YspA SLOG family NQ528_RS13910 PF00005 ABC transporter NQ528_RS13915 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS13920 PF00072 Response regulator receiver domain NQ528_RS13920 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS13945 PF00533 BRCA1 C Terminus (BRCT) domain NQ528_RS13945 PF01653 NAD-dependent DNA ligase adenylation domain NQ528_RS13945 PF03120 NAD-dependent DNA ligase OB-fold domain NQ528_RS13945 PF12826 Helix-hairpin-helix motif NQ528_RS13990 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NQ528_RS13990 PF14490 Helix-hairpin-helix containing domain NQ528_RS13990 PF13538 UvrD-like helicase C-terminal domain NQ528_RS13995 PF09588 YqaJ-like viral recombinase domain NQ528_RS14005 PF02920 DNA binding domain of tn916 integrase NQ528_RS14005 PF00589 Phage integrase family NQ528_RS14010 PF01336 OB-fold nucleic acid binding domain NQ528_RS14010 PF00152 tRNA synthetases class II (D, K and N) NQ528_RS14015 PF03449 Transcription elongation factor, N-terminal NQ528_RS14015 PF01272 Transcription elongation factor, GreA/GreB, C-term NQ528_RS14020 PF03572 Peptidase family S41 NQ528_RS14020 PF17820 PDZ domain NQ528_RS14020 PF01471 Putative peptidoglycan binding domain NQ528_RS14025 PF01476 LysM domain NQ528_RS14025 PF08525 Opacity-associated protein A N-terminal motif NQ528_RS14025 PF01551 Peptidase family M23 NQ528_RS14030 PF18075 FtsX extracellular domain NQ528_RS14030 PF02687 FtsX-like permease family NQ528_RS14035 PF00005 ABC transporter NQ528_RS14040 PF05651 Putative sugar diacid recognition NQ528_RS14040 PF13556 PucR C-terminal helix-turn-helix domain NQ528_RS14040 PF17853 GGDEF-like domain NQ528_RS14045 PF00849 RNA pseudouridylate synthase NQ528_RS14045 PF01479 S4 domain NQ528_RS14060 PF14492 Elongation Factor G, domain II NQ528_RS14060 PF00679 Elongation factor G C-terminus NQ528_RS14060 PF00009 Elongation factor Tu GTP binding domain NQ528_RS14060 PF03144 Elongation factor Tu domain 2 NQ528_RS14060 PF03764 Elongation factor G, domain IV NQ528_RS14070 PF00588 SpoU rRNA Methylase family NQ528_RS14070 PF08032 RNA 2'-O ribose methyltransferase substrate binding NQ528_RS14100 PF00155 Aminotransferase class I and II NQ528_RS14105 PF00579 tRNA synthetases class I (W and Y) NQ528_RS14110 PF07670 Nucleoside recognition NQ528_RS14115 PF07670 Nucleoside recognition NQ528_RS14120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NQ528_RS14120 PF18277 AbrB C-terminal domain NQ528_RS14130 PF00180 Isocitrate/isopropylmalate dehydrogenase NQ528_RS14135 PF00300 Histidine phosphatase superfamily (branch 1) NQ528_RS14150 PF00072 Response regulator receiver domain NQ528_RS14150 PF00486 Transcriptional regulatory protein, C terminal NQ528_RS14155 PF16736 Single Cache-like NQ528_RS14155 PF00989 PAS fold NQ528_RS14155 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS14160 PF07136 Protein of unknown function (DUF1385) NQ528_RS14165 PF05175 Methyltransferase small domain NQ528_RS14165 PF17827 PrmC N-terminal domain NQ528_RS14170 PF08323 Starch synthase catalytic domain NQ528_RS14170 PF00534 Glycosyl transferases group 1 NQ528_RS14175 PF00483 Nucleotidyl transferase NQ528_RS14180 PF00483 Nucleotidyl transferase NQ528_RS14180 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_RS14185 PF00128 Alpha amylase, catalytic domain NQ528_RS14185 PF02806 Alpha amylase, C-terminal all-beta domain NQ528_RS14185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NQ528_RS14190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NQ528_RS14190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NQ528_RS14195 PF00512 His Kinase A (phospho-acceptor) domain NQ528_RS14195 PF00672 HAMP domain NQ528_RS14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS14205 PF08264 Anticodon-binding domain of tRNA NQ528_RS14205 PF01588 Putative tRNA binding domain NQ528_RS14205 PF09334 tRNA synthetases class I (M) NQ528_RS14210 PF01026 TatD related DNase NQ528_RS14225 PF00682 HMGL-like NQ528_RS14230 PF07729 FCD domain NQ528_RS14230 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS14245 PF09084 NMT1/THI5 like NQ528_RS14255 PF01568 Molydopterin dinucleotide binding domain NQ528_RS14255 PF00384 Molybdopterin oxidoreductase NQ528_RS14260 PF09547 Stage IV sporulation protein A (spore_IV_A) NQ528_RS14285 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NQ528_RS14285 PF15714 Stage V sporulation protein T C-terminal, transcription factor NQ528_RS14295 PF13411 MerR HTH family regulatory protein NQ528_RS14300 PF01381 Helix-turn-helix NQ528_RS14305 PF01381 Helix-turn-helix NQ528_RS14310 PF01791 DeoC/LacD family aldolase NQ528_RS14315 PF03319 Ethanolamine utilisation protein EutN/carboxysome NQ528_RS14320 PF00936 BMC domain NQ528_RS14330 PF00936 BMC domain NQ528_RS14335 PF00936 BMC domain NQ528_RS14340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQ528_RS14340 PF13237 4Fe-4S dicluster domain NQ528_RS14340 PF13375 RnfC Barrel sandwich hybrid domain NQ528_RS14340 PF10531 SLBB domain NQ528_RS14345 PF03319 Ethanolamine utilisation protein EutN/carboxysome NQ528_RS14355 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS14365 PF00596 Class II Aldolase and Adducin N-terminal domain NQ528_RS14375 PF01008 Initiation factor 2 subunit family NQ528_RS14380 PF01636 Phosphotransferase enzyme family NQ528_RS14385 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS14390 PF00005 ABC transporter NQ528_RS14400 PF02733 Dak1 domain NQ528_RS14445 PF00753 Metallo-beta-lactamase superfamily NQ528_RS14445 PF00258 Flavodoxin NQ528_RS14450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQ528_RS14450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQ528_RS14450 PF02770 Acyl-CoA dehydrogenase, middle domain NQ528_RS14485 PF16450 Proteasomal ATPase OB C-terminal domain NQ528_RS14485 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_RS14485 PF17758 Proteasomal ATPase OB N-terminal domain NQ528_RS14630 PF00293 NUDIX domain NQ528_RS14630 PF09297 NADH pyrophosphatase zinc ribbon domain NQ528_RS14650 PF03764 Elongation factor G, domain IV NQ528_RS14650 PF00009 Elongation factor Tu GTP binding domain NQ528_RS14650 PF00679 Elongation factor G C-terminus NQ528_RS14650 PF14492 Elongation Factor G, domain II NQ528_RS14660 PF08241 Methyltransferase domain NQ528_RS14665 PF04542 Sigma-70 region 2 NQ528_RS14665 PF04539 Sigma-70 region 3 NQ528_RS14665 PF04545 Sigma-70, region 4 NQ528_RS14695 PF01695 IstB-like ATP binding protein NQ528_RS14720 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family NQ528_RS14725 PF07687 Peptidase dimerisation domain NQ528_RS14725 PF01546 Peptidase family M20/M25/M40 NQ528_RS14730 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS14735 PF00005 ABC transporter NQ528_RS14740 PF13407 Periplasmic binding protein domain NQ528_RS14750 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS14765 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS14810 PF02384 N-6 DNA Methylase NQ528_RS14890 PF13408 Recombinase zinc beta ribbon domain NQ528_RS14890 PF00239 Resolvase, N terminal domain NQ528_RS14890 PF07508 Recombinase NQ528_RS14900 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NQ528_RS14960 PF01139 tRNA-splicing ligase RtcB NQ528_RS14985 PF03691 Uncharacterised protein family (UPF0167) NQ528_RS15235 PF04225 Opacity-associated protein A LysM-like domain NQ528_RS15235 PF01551 Peptidase family M23 NQ528_RS15340 PF00437 Type II/IV secretion system protein NQ528_RS15370 PF04026 SpoVG NQ528_RS15475 PF00085 Thioredoxin NQ528_RS15485 PF00269 Small, acid-soluble spore proteins, alpha/beta type NQ528_RS15490 PF00005 ABC transporter NQ528_RS15490 PF17845 FbpC C-terminal regulatory nucleotide binding domain NQ528_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_RS15530 PF01263 Aldose 1-epimerase NQ528_RS15540 PF03193 RsgA GTPase NQ528_RS15540 PF16745 RsgA N-terminal domain NQ528_RS15545 PF03793 PASTA domain NQ528_RS15545 PF00069 Protein kinase domain NQ528_RS15555 PF04055 Radical SAM superfamily NQ528_RS15560 PF01029 NusB family NQ528_RS15560 PF01189 16S rRNA methyltransferase RsmB/F NQ528_RS15565 PF04298 Putative neutral zinc metallopeptidase NQ528_RS15570 PF02911 Formyl transferase, C-terminal domain NQ528_RS15570 PF00551 Formyl transferase NQ528_RS15575 PF01327 Polypeptide deformylase NQ528_RS15580 PF04851 Type III restriction enzyme, res subunit NQ528_RS15580 PF18074 Primosomal protein N C-terminal domain NQ528_RS15580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NQ528_RS15580 PF00271 Helicase conserved C-terminal domain NQ528_RS15580 PF17764 3′ DNA-binding domain (3′BD) NQ528_RS15585 PF00302 Chloramphenicol acetyltransferase NQ528_RS15590 PF04127 DNA / pantothenate metabolism flavoprotein NQ528_RS15590 PF02441 Flavoprotein NQ528_RS15595 PF01192 RNA polymerase Rpb6 NQ528_RS15600 PF00625 Guanylate kinase NQ528_RS15605 PF04025 Domain of unknown function (DUF370) NQ528_RS15610 PF03755 YicC-like family, N-terminal region NQ528_RS15610 PF08340 Domain of unknown function (DUF1732) NQ528_RS15615 PF00364 Biotin-requiring enzyme NQ528_RS15615 PF00682 HMGL-like NQ528_RS15615 PF02436 Conserved carboxylase domain NQ528_RS15620 PF00364 Biotin-requiring enzyme NQ528_RS15625 PF01039 Carboxyl transferase domain NQ528_RS15635 PF00849 RNA pseudouridylate synthase NQ528_RS15635 PF01479 S4 domain NQ528_RS15640 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_RS15640 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_RS15645 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NQ528_RS15655 PF04079 Segregation and condensation complex subunit ScpB NQ528_RS15660 PF02616 Segregation and condensation protein ScpA NQ528_RS15665 PF02163 Peptidase family M50 NQ528_RS15670 PF00830 Ribosomal L28 family NQ528_RS15680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NQ528_RS15680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NQ528_RS15685 PF02660 Glycerol-3-phosphate acyltransferase NQ528_RS15690 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NQ528_RS15690 PF01926 50S ribosome-binding GTPase NQ528_RS15700 PF01783 Ribosomal L32p protein family NQ528_RS15715 PF00342 Phosphoglucose isomerase NQ528_RS15720 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_RS15720 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_RS15735 PF00919 Uncharacterized protein family UPF0004 NQ528_RS15735 PF04055 Radical SAM superfamily NQ528_RS15735 PF01938 TRAM domain NQ528_RS15740 PF00586 AIR synthase related protein, N-terminal domain NQ528_RS15740 PF02769 AIR synthase related protein, C-terminal domain NQ528_RS15740 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NQ528_RS15755 PF00072 Response regulator receiver domain NQ528_RS15765 PF01053 Cys/Met metabolism PLP-dependent enzyme NQ528_RS15770 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_RS15770 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_RS15780 PF00440 Bacterial regulatory proteins, tetR family NQ528_RS15785 PF00664 ABC transporter transmembrane region NQ528_RS15785 PF00005 ABC transporter NQ528_RS15790 PF00664 ABC transporter transmembrane region NQ528_RS15790 PF00005 ABC transporter NQ528_RS15795 PF00542 Ribosomal protein L7/L12 C-terminal domain NQ528_RS15795 PF16320 Ribosomal protein L7/L12 dimerisation domain NQ528_RS15800 PF00466 Ribosomal protein L10 NQ528_RS15805 PF00687 Ribosomal protein L1p/L10e family NQ528_RS15810 PF00298 Ribosomal protein L11, RNA binding domain NQ528_RS15810 PF03946 Ribosomal protein L11, N-terminal domain NQ528_RS15815 PF00467 KOW motif NQ528_RS15815 PF02357 Transcription termination factor nusG NQ528_RS15820 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NQ528_RS15825 PF00471 Ribosomal protein L33 NQ528_RS15835 PF01820 D-ala D-ala ligase N-terminus NQ528_RS15835 PF07478 D-ala D-ala ligase C-terminus NQ528_RS15840 PF01177 Asp/Glu/Hydantoin racemase NQ528_RS15850 PF05746 DALR anticodon binding domain NQ528_RS15850 PF00750 tRNA synthetases class I (R) NQ528_RS15850 PF03485 Arginyl tRNA synthetase N terminal domain NQ528_RS15855 PF02574 Homocysteine S-methyltransferase NQ528_RS15855 PF02219 Methylenetetrahydrofolate reductase NQ528_RS15860 PF00301 Rubredoxin NQ528_RS15860 PF01613 Flavin reductase like domain NQ528_RS15865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NQ528_RS15865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NQ528_RS15875 PF03461 TRCF domain NQ528_RS15875 PF17757 UvrB interaction domain NQ528_RS15875 PF02559 CarD-like/TRCF domain NQ528_RS15875 PF00270 DEAD/DEAH box helicase NQ528_RS15875 PF00271 Helicase conserved C-terminal domain NQ528_RS15880 PF01195 Peptidyl-tRNA hydrolase NQ528_RS15885 PF14572 Phosphoribosyl synthetase-associated domain NQ528_RS15885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NQ528_RS15890 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_RS15890 PF12804 MobA-like NTP transferase domain NQ528_RS15895 PF00391 PEP-utilising enzyme, mobile domain NQ528_RS15895 PF02896 PEP-utilising enzyme, TIM barrel domain NQ528_RS15895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NQ528_RS15905 PF01098 Cell cycle protein NQ528_RS15910 PF01268 Formate--tetrahydrofolate ligase NQ528_RS15915 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NQ528_RS15920 PF00814 Glycoprotease family NQ528_RS15925 PF02502 Ribose/Galactose Isomerase NQ528_RS15960 PF18146 Damage-inducible protein CinA KH domain NQ528_RS15960 PF02464 Competence-damaged protein NQ528_RS15960 PF00994 Probable molybdopterin binding domain NQ528_RS15970 PF02926 THUMP domain NQ528_RS15970 PF02568 Thiamine biosynthesis protein (ThiI) NQ528_RS15975 PF00266 Aminotransferase class-V NQ528_RS15980 PF03413 Peptidase propeptide and YPEB domain NQ528_RS15980 PF14620 YpeB sporulation NQ528_RS15990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQ528_RS16015 PF00664 ABC transporter transmembrane region NQ528_RS16015 PF00005 ABC transporter NQ528_RS16020 PF00005 ABC transporter NQ528_RS16020 PF00664 ABC transporter transmembrane region NQ528_RS16025 PF14310 Fibronectin type III-like domain NQ528_RS16025 PF00933 Glycosyl hydrolase family 3 N terminal domain NQ528_RS16025 PF01915 Glycosyl hydrolase family 3 C-terminal domain NQ528_RS16025 PF07691 PA14 domain NQ528_RS16030 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16035 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16040 PF00005 ABC transporter NQ528_RS16045 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_RS16050 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS16060 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16065 PF00005 ABC transporter NQ528_RS16070 PF00005 ABC transporter NQ528_RS16070 PF08402 TOBE domain NQ528_RS16075 PF02743 Cache domain NQ528_RS16075 PF00672 HAMP domain NQ528_RS16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_RS16075 PF06580 Histidine kinase NQ528_RS16080 PF12833 Helix-turn-helix domain NQ528_RS16080 PF00072 Response regulator receiver domain NQ528_RS16085 PF13580 SIS domain NQ528_RS16090 PF01325 Iron dependent repressor, N-terminal DNA binding domain NQ528_RS16090 PF00480 ROK family NQ528_RS16100 PF00294 pfkB family carbohydrate kinase NQ528_RS16100 PF01467 Cytidylyltransferase-like NQ528_RS16110 PF01325 Iron dependent repressor, N-terminal DNA binding domain NQ528_RS16110 PF00480 ROK family NQ528_RS16115 PF00480 ROK family NQ528_RS16120 PF01238 Phosphomannose isomerase type I NQ528_RS16130 PF07702 UTRA domain NQ528_RS16130 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS16135 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_RS16145 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16150 PF00005 ABC transporter NQ528_RS16160 PF01008 Initiation factor 2 subunit family NQ528_RS16165 PF11230 Protein of unknown function (DUF3029) NQ528_RS16170 PF00672 HAMP domain NQ528_RS16170 PF02743 Cache domain NQ528_RS16170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS16175 PF01418 Helix-turn-helix domain, rpiR family NQ528_RS16175 PF01380 SIS domain NQ528_RS16180 PF02502 Ribose/Galactose Isomerase NQ528_RS16185 PF00121 Triosephosphate isomerase NQ528_RS16195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS16195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS16210 PF02733 Dak1 domain NQ528_RS16215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_RS16215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_RS16225 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16235 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16240 PF00005 ABC transporter NQ528_RS16265 PF00380 Ribosomal protein S9/S16 NQ528_RS16270 PF00572 Ribosomal protein L13 NQ528_RS16280 PF01381 Helix-turn-helix NQ528_RS16285 PF17785 PUA-like domain NQ528_RS16285 PF10672 S-adenosylmethionine-dependent methyltransferase NQ528_RS16295 PF00152 tRNA synthetases class II (D, K and N) NQ528_RS16295 PF02938 GAD domain NQ528_RS16295 PF01336 OB-fold nucleic acid binding domain NQ528_RS16300 PF03129 Anticodon binding domain NQ528_RS16300 PF13393 Histidyl-tRNA synthetase NQ528_RS16305 PF02142 MGS-like domain NQ528_RS16310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NQ528_RS16315 PF00905 Penicillin binding protein transpeptidase domain NQ528_RS16335 PF02545 Maf-like protein NQ528_RS16345 PF00692 dUTPase NQ528_RS16350 PF12392 Collagenase NQ528_RS16350 PF01136 Peptidase family U32 NQ528_RS16355 PF05164 Cell division protein ZapA NQ528_RS16360 PF00343 Carbohydrate phosphorylase NQ528_RS16365 PF00128 Alpha amylase, catalytic domain NQ528_RS16365 PF02903 Alpha amylase, N-terminal ig-like domain NQ528_RS16370 PF00005 ABC transporter NQ528_RS16370 PF02687 FtsX-like permease family NQ528_RS16370 PF12704 MacB-like periplasmic core domain NQ528_RS16385 PF01183 Glycosyl hydrolases family 25 NQ528_RS16390 PF04055 Radical SAM superfamily NQ528_RS16400 PF03477 ATP cone domain NQ528_RS16400 PF13597 Anaerobic ribonucleoside-triphosphate reductase NQ528_RS16405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_RS16410 PF00005 ABC transporter NQ528_RS16410 PF12848 ABC transporter NQ528_RS16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_RS16425 PF03466 LysR substrate binding domain NQ528_RS16430 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_RS16430 PF00107 Zinc-binding dehydrogenase NQ528_RS16435 PF01645 Conserved region in glutamate synthase NQ528_RS16440 PF01475 Ferric uptake regulator family NQ528_RS16445 PF00589 Phage integrase family NQ528_RS16445 PF02899 Phage integrase, N-terminal SAM-like domain NQ528_RS16450 PF01212 Beta-eliminating lyase NQ528_RS16455 PF00209 Sodium:neurotransmitter symporter family NQ528_RS16480 PF01554 MatE NQ528_RS16485 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NQ528_RS16490 PF00005 ABC transporter NQ528_RS16490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_RS16495 PF00005 ABC transporter NQ528_RS16500 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS16500 PF07702 UTRA domain NQ528_RS16510 PF02653 Branched-chain amino acid transport system / permease component NQ528_RS16515 PF00005 ABC transporter NQ528_RS16520 PF13407 Periplasmic binding protein domain NQ528_RS16525 PF01979 Amidohydrolase family NQ528_RS16530 PF02633 Creatinine amidohydrolase NQ528_RS16540 PF01979 Amidohydrolase family NQ528_RS16555 PF00294 pfkB family carbohydrate kinase NQ528_RS16580 PF07702 UTRA domain NQ528_RS16580 PF00392 Bacterial regulatory proteins, gntR family NQ528_RS16590 PF06838 Methionine gamma-lyase NQ528_RS16600 PF05343 M42 glutamyl aminopeptidase NQ528_RS16605 PF05343 M42 glutamyl aminopeptidase NQ528_RS16610 PF08245 Mur ligase middle domain NQ528_RS16625 PF00009 Elongation factor Tu GTP binding domain NQ528_RS16625 PF03144 Elongation factor Tu domain 2 NQ528_RS16625 PF06421 GTP-binding protein LepA C-terminus NQ528_RS16625 PF00679 Elongation factor G C-terminus NQ528_RS16635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQ528_RS16640 PF06949 Protein of unknown function (DUF1292) NQ528_RS16660 PF00694 Aconitase C-terminal domain NQ528_RS16660 PF00330 Aconitase family (aconitate hydratase) NQ528_RS16680 PF01554 MatE NQ528_RS16730 PF04865 Baseplate J-like protein NQ528_RS16735 PF10934 Protein of unknown function (DUF2634) NQ528_RS16770 PF09393 Phage tail tube protein NQ528_RS16775 PF04984 Phage tail sheath protein subtilisin-like domain NQ528_RS16775 PF17482 Phage tail sheath C-terminal domain NQ528_RS16775 PF17481 Phage tail sheath protein beta-sandwich domain NQ528_RS16790 PF01381 Helix-turn-helix NQ528_RS16810 PF02203 Tar ligand binding domain homologue NQ528_RS16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_RS16810 PF00672 HAMP domain NQ528_RS16815 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NQ528_RS16820 PF16921 Tex protein YqgF-like domain NQ528_RS16820 PF09371 Tex-like protein N-terminal domain NQ528_RS16820 PF00575 S1 RNA binding domain NQ528_RS16820 PF17674 HHH domain NQ528_RS16825 PF04055 Radical SAM superfamily NQ528_RS16825 PF02310 B12 binding domain NQ528_RS16840 PF00535 Glycosyl transferase family 2 NQ528_RS16845 PF00899 ThiF family NQ528_RS16850 PF01171 PP-loop family NQ528_RS16855 PF03471 Transporter associated domain NQ528_RS16855 PF00571 CBS domain NQ528_RS16860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_RS16860 PF10371 Domain of unknown function NQ528_RS16860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_RS16860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_RS16860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_RS16870 PF12437 Glutamine synthetase type III N terminal NQ528_RS16870 PF00120 Glutamine synthetase, catalytic domain NQ528_RS16870 PF18318 Glutamine synthetase C-terminal domain NQ528_RS16875 PF03590 Aspartate-ammonia ligase NQ528_RS16885 PF06969 HemN C-terminal domain NQ528_RS16885 PF04055 Radical SAM superfamily NQ528_RS16895 PF00842 Alanine racemase, C-terminal domain NQ528_RS16895 PF01168 Alanine racemase, N-terminal domain NQ528_RS16905 PF03418 Germination protease NQ528_RS16920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NQ528_RS16920 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQ528_RS16925 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQ528_RS16930 PF03652 Holliday junction resolvase NQ528_RS16945 PF01196 Ribosomal protein L17 NQ528_RS16950 PF01000 RNA polymerase Rpb3/RpoA insert domain NQ528_RS16950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NQ528_RS16950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NQ528_RS16955 PF00163 Ribosomal protein S4/S9 N-terminal domain NQ528_RS16955 PF01479 S4 domain NQ528_RS16960 PF00411 Ribosomal protein S11 NQ528_RS16965 PF00416 Ribosomal protein S13/S18 NQ528_RS16970 PF00444 Ribosomal protein L36 NQ528_RS16975 PF01176 Translation initiation factor 1A / IF-1 NQ528_RS16985 PF00557 Metallopeptidase family M24 NQ528_RS16990 PF05191 Adenylate kinase, active site lid NQ528_RS16995 PF00344 SecY translocase NQ528_RS17000 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NQ528_RS17005 PF00327 Ribosomal protein L30p/L7e NQ528_RS17010 PF00333 Ribosomal protein S5, N-terminal domain NQ528_RS17010 PF03719 Ribosomal protein S5, C-terminal domain NQ528_RS17015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NQ528_RS17020 PF00347 Ribosomal protein L6 NQ528_RS17025 PF00410 Ribosomal protein S8 NQ528_RS17030 PF00253 Ribosomal protein S14p/S29e NQ528_RS17035 PF00673 ribosomal L5P family C-terminus NQ528_RS17035 PF00281 Ribosomal protein L5 NQ528_RS17040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NQ528_RS17040 PF00467 KOW motif NQ528_RS17045 PF00238 Ribosomal protein L14p/L23e NQ528_RS17050 PF00366 Ribosomal protein S17 NQ528_RS17055 PF00831 Ribosomal L29 protein NQ528_RS17060 PF00252 Ribosomal protein L16p/L10e NQ528_RS17065 PF07650 KH domain NQ528_RS17065 PF00189 Ribosomal protein S3, C-terminal domain NQ528_RS17070 PF00237 Ribosomal protein L22p/L17e NQ528_RS17075 PF00203 Ribosomal protein S19 NQ528_RS17080 PF00181 Ribosomal Proteins L2, RNA binding domain NQ528_RS17080 PF03947 Ribosomal Proteins L2, C-terminal domain NQ528_RS17085 PF00276 Ribosomal protein L23 NQ528_RS17090 PF00573 Ribosomal protein L4/L1 family NQ528_RS17095 PF00297 Ribosomal protein L3 NQ528_RS17100 PF00338 Ribosomal protein S10p/S20e NQ528_RS17110 PF09180 Prolyl-tRNA synthetase, C-terminal NQ528_RS17110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_RS17110 PF03129 Anticodon binding domain NQ528_RS17115 PF01027 Inhibitor of apoptosis-promoting Bax1 NQ528_RS17120 PF00550 Phosphopantetheine attachment site NQ528_RS17125 PF07977 FabA-like domain NQ528_RS17130 PF02801 Beta-ketoacyl synthase, C-terminal domain NQ528_RS17130 PF00109 Beta-ketoacyl synthase, N-terminal domain NQ528_RS17140 PF03060 Nitronate monooxygenase NQ528_RS17145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NQ528_RS17145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NQ528_RS17150 PF00698 Acyl transferase domain NQ528_RS17155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NQ528_RS17155 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_RS17155 PF08501 Shikimate dehydrogenase substrate binding domain NQ528_RS17160 PF01202 Shikimate kinase NQ528_RS17170 PF02915 Rubrerythrin NQ528_RS17180 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NQ528_RS17180 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NQ528_RS17185 PF00814 Glycoprotease family NQ528_RS17190 PF00583 Acetyltransferase (GNAT) family NQ528_RS17195 PF00476 DNA polymerase family A NQ528_RS17195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NQ528_RS17195 PF01367 5'-3' exonuclease, C-terminal SAM fold NQ528_RS17200 PF01207 Dihydrouridine synthase (Dus) NQ528_RS17205 PF02390 Putative methyltransferase NQ528_RS17210 PF10369 Small subunit of acetolactate synthase NQ528_RS17215 PF00205 Thiamine pyrophosphate enzyme, central domain NQ528_RS17215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_RS17215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQ528_RS17225 PF01497 Periplasmic binding protein NQ528_RS17230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQ528_RS17230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQ528_RS17235 PF00202 Aminotransferase class-III NQ528_RS17240 PF00696 Amino acid kinase family NQ528_RS17245 PF01960 ArgJ family NQ528_RS17250 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQ528_RS17250 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQ528_RS17255 PF14698 Argininosuccinate lyase C-terminal NQ528_RS17255 PF00206 Lyase NQ528_RS17260 PF00764 Arginosuccinate synthase NQ528_RS17270 PF16360 GTP-binding GTPase Middle Region NQ528_RS17270 PF13167 GTP-binding GTPase N-terminal NQ528_RS17270 PF01926 50S ribosome-binding GTPase NQ528_RS17280 PF01145 SPFH domain / Band 7 family NQ528_RS17290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_RS17290 PF01842 ACT domain NQ528_RS17290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_RS17295 PF00266 Aminotransferase class-V NQ528_RS17300 PF00005 ABC transporter NQ528_RS17325 PF01726 LexA DNA binding domain NQ528_RS17325 PF00717 Peptidase S24-like NQ528_RS17390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NQ528_RS17395 PF02554 Carbon starvation protein CstA NQ528_RS17420 PF00465 Iron-containing alcohol dehydrogenase NQ528_RS17430 PF02867 Ribonucleotide reductase, barrel domain NQ528_RS17430 PF03477 ATP cone domain NQ528_RS17430 PF00317 Ribonucleotide reductase, all-alpha domain NQ528_RS17440 PF00356 Bacterial regulatory proteins, lacI family NQ528_RS17445 PF01180 Dihydroorotate dehydrogenase NQ528_RS17450 PF00860 Permease family NQ528_RS17460 PF00795 Carbon-nitrogen hydrolase NQ528_RS17465 PF07969 Amidohydrolase family NQ528_RS17475 PF08543 Phosphomethylpyrimidine kinase NQ528_RS17485 PF02386 Cation transport protein NQ528_RS17490 PF00293 NUDIX domain NQ528_RS17490 PF13344 Haloacid dehalogenase-like hydrolase NQ528_RS17510 PF02583 Metal-sensitive transcriptional repressor NQ528_RS17535 PF07728 AAA domain (dynein-related subfamily) NQ528_RS17545 PF05762 VWA domain containing CoxE-like protein NQ528_RS17565 PF00403 Heavy-metal-associated domain NQ528_RS17570 PF00403 Heavy-metal-associated domain NQ528_RS17575 PF01022 Bacterial regulatory protein, arsR family NQ528_RS17590 PF00343 Carbohydrate phosphorylase NQ528_RS17595 PF02446 4-alpha-glucanotransferase NQ528_RS17600 PF12850 Calcineurin-like phosphoesterase superfamily domain NQ528_RS17620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_RS17630 PF05175 Methyltransferase small domain NQ528_RS17635 PF12838 4Fe-4S dicluster domain NQ528_RS17640 PF04468 PSP1 C-terminal conserved region NQ528_RS17650 PF06153 Cyclic-di-AMP receptor NQ528_RS17655 PF01276 Orn/Lys/Arg decarboxylase, major domain NQ528_RS17655 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NQ528_RS17675 PF02254 TrkA-N domain NQ528_RS17675 PF02080 TrkA-C domain NQ528_RS17695 PF12848 ABC transporter NQ528_RS17695 PF00005 ABC transporter NQ528_RS17700 PF01790 Prolipoprotein diacylglyceryl transferase NQ528_RS17740 PF01471 Putative peptidoglycan binding domain NQ528_RS17740 PF07486 Cell Wall Hydrolase NQ528_RS17765 PF00535 Glycosyl transferase family 2 NQ528_RS17770 PF00535 Glycosyl transferase family 2 NQ528_RS17800 PF00535 Glycosyl transferase family 2 NQ528_RS17805 PF00005 ABC transporter NQ528_RS17810 PF01061 ABC-2 type transporter NQ528_RS17815 PF04321 RmlD substrate binding domain NQ528_RS17820 PF00535 Glycosyl transferase family 2 NQ528_RS17825 PF16363 GDP-mannose 4,6 dehydratase NQ528_RS17830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NQ528_RS17835 PF00483 Nucleotidyl transferase NQ528_RS17840 PF13439 Glycosyltransferase Family 4 NQ528_RS17840 PF00534 Glycosyl transferases group 1 NQ528_RS17845 PF02397 Bacterial sugar transferase NQ528_RS17865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_RS17865 PF02403 Seryl-tRNA synthetase N-terminal domain NQ528_RS17870 PF02195 ParB-like nuclease domain NQ528_RS17870 PF17762 HTH domain found in ParB protein NQ528_RS17875 PF13614 AAA domain NQ528_RS17880 PF17762 HTH domain found in ParB protein NQ528_RS17880 PF02195 ParB-like nuclease domain NQ528_RS17885 PF02527 rRNA small subunit methyltransferase G NQ528_RS17890 PF01134 Glucose inhibited division protein A NQ528_RS17890 PF13932 GidA associated domain NQ528_RS17895 PF01926 50S ribosome-binding GTPase NQ528_RS17895 PF12631 MnmE helical domain NQ528_RS17895 PF10396 GTP-binding protein TrmE N-terminus NQ528_RS17900 PF14804 Jag N-terminus NQ528_RS17900 PF01424 R3H domain NQ528_RS17905 PF02096 60Kd inner membrane protein NQ528_RS17910 PF01809 Putative membrane protein insertion efficiency factor NQ528_RS17915 PF00825 Ribonuclease P NQ528_RS17920 PF00468 Ribosomal protein L34