locus-tag class description AMF_RS05075 PF00731 AIR carboxylase AMF_RS05085 PF01098 Cell cycle protein AMF_RS05090 PF00216 Bacterial DNA-binding protein AMF_RS05115 PF08245 Mur ligase middle domain AMF_RS05115 PF02875 Mur ligase family, glutamate ligase domain AMF_RS05115 PF01225 Mur ligase family, catalytic domain AMF_RS05120 PF00579 tRNA synthetases class I (W and Y) AMF_RS05125 PF01025 GrpE AMF_RS05130 PF01872 RibD C-terminal domain AMF_RS05130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMF_RS05135 PF06418 CTP synthase N-terminus AMF_RS05135 PF00117 Glutamine amidotransferase class-I AMF_RS05140 PF03840 Preprotein translocase SecG subunit AMF_RS05145 PF02899 Phage integrase, N-terminal SAM-like domain AMF_RS05145 PF00589 Phage integrase family AMF_RS05150 PF00005 ABC transporter AMF_RS05155 PF00390 Malic enzyme, N-terminal domain AMF_RS05155 PF03949 Malic enzyme, NAD binding domain AMF_RS05155 PF01515 Phosphate acetyl/butaryl transferase AMF_RS05165 PF00361 Proton-conducting membrane transporter AMF_RS05180 PF01617 Surface antigen AMF_RS05195 PF05690 Thiazole biosynthesis protein ThiG AMF_RS05205 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMF_RS05215 PF13145 PPIC-type PPIASE domain AMF_RS05245 PF08946 Osmosensory transporter coiled coil AMF_RS05245 PF00083 Sugar (and other) transporter AMF_RS05250 PF00886 Ribosomal protein S16 AMF_RS05255 PF00132 Bacterial transferase hexapeptide (six repeats) AMF_RS05255 PF12804 MobA-like NTP transferase domain AMF_RS05255 PF14602 Hexapeptide repeat of succinyl-transferase AMF_RS05265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMF_RS05265 PF01409 tRNA synthetases class II core domain (F) AMF_RS05270 PF00453 Ribosomal protein L20 AMF_RS05285 PF07497 Rho termination factor, RNA-binding domain AMF_RS05285 PF07498 Rho termination factor, N-terminal domain AMF_RS05285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMF_RS05290 PF01617 Surface antigen AMF_RS05295 PF01617 Surface antigen AMF_RS05315 PF03966 Trm112p-like protein AMF_RS05335 PF03477 ATP cone domain AMF_RS05350 PF01617 Surface antigen AMF_RS05375 PF00154 recA bacterial DNA recombination protein AMF_RS05380 PF00156 Phosphoribosyl transferase domain AMF_RS05385 PF00899 ThiF family AMF_RS05390 PF01617 Surface antigen AMF_RS05415 PF00085 Thioredoxin AMF_RS05425 PF00676 Dehydrogenase E1 component AMF_RS05450 PF00571 CBS domain AMF_RS05450 PF00478 IMP dehydrogenase / GMP reductase domain AMF_RS05455 PF01513 ATP-NAD kinase AMF_RS05465 PF00698 Acyl transferase domain AMF_RS05470 PF02223 Thymidylate kinase AMF_RS05485 PF02556 Preprotein translocase subunit SecB AMF_RS05490 PF13462 Thioredoxin AMF_RS05495 PF05193 Peptidase M16 inactive domain AMF_RS05495 PF00675 Insulinase (Peptidase family M16) AMF_RS05500 PF04225 Opacity-associated protein A LysM-like domain AMF_RS05500 PF01551 Peptidase family M23 AMF_RS05510 PF00677 Lumazine binding domain AMF_RS05525 PF00271 Helicase conserved C-terminal domain AMF_RS05525 PF03461 TRCF domain AMF_RS05525 PF02559 CarD-like/TRCF domain AMF_RS05525 PF17757 UvrB interaction domain AMF_RS05525 PF00270 DEAD/DEAH box helicase AMF_RS05530 PF00075 RNase H AMF_RS05540 PF00696 Amino acid kinase family AMF_RS05545 PF01765 Ribosome recycling factor AMF_RS05550 PF01255 Putative undecaprenyl diphosphate synthase AMF_RS05570 PF01259 SAICAR synthetase AMF_RS05575 PF13393 Histidyl-tRNA synthetase AMF_RS05575 PF03129 Anticodon binding domain AMF_RS05585 PF02628 Cytochrome oxidase assembly protein AMF_RS05590 PF02548 Ketopantoate hydroxymethyltransferase AMF_RS05595 PF00005 ABC transporter AMF_RS05600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMF_RS05615 PF00313 'Cold-shock' DNA-binding domain AMF_RS05620 PF00512 His Kinase A (phospho-acceptor) domain AMF_RS05620 PF00672 HAMP domain AMF_RS05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMF_RS05620 PF00989 PAS fold AMF_RS05630 PF03120 NAD-dependent DNA ligase OB-fold domain AMF_RS05630 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMF_RS05630 PF01653 NAD-dependent DNA ligase adenylation domain AMF_RS05630 PF12826 Helix-hairpin-helix motif AMF_RS05630 PF00533 BRCA1 C Terminus (BRCT) domain AMF_RS05635 PF00462 Glutaredoxin AMF_RS05650 PF18073 Rubredoxin metal binding domain AMF_RS05665 PF01250 Ribosomal protein S6 AMF_RS05670 PF01084 Ribosomal protein S18 AMF_RS05675 PF01281 Ribosomal protein L9, N-terminal domain AMF_RS05675 PF03948 Ribosomal protein L9, C-terminal domain AMF_RS05680 PF00464 Serine hydroxymethyltransferase AMF_RS05690 PF00664 ABC transporter transmembrane region AMF_RS05690 PF00005 ABC transporter AMF_RS05695 PF00890 FAD binding domain AMF_RS05695 PF02910 Fumarate reductase flavoprotein C-term AMF_RS05700 PF13085 2Fe-2S iron-sulfur cluster binding domain AMF_RS05705 PF02511 Thymidylate synthase complementing protein AMF_RS05710 PF07690 Major Facilitator Superfamily AMF_RS05715 PF05491 RuvB C-terminal winged helix domain AMF_RS05715 PF17864 RuvB AAA lid domain AMF_RS05715 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMF_RS05720 PF01330 RuvA N terminal domain AMF_RS05720 PF07499 RuvA, C-terminal domain AMF_RS05725 PF01578 Cytochrome C assembly protein AMF_RS05730 PF00625 Guanylate kinase AMF_RS05740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMF_RS05740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMF_RS05775 PF00034 Cytochrome c AMF_RS05785 PF00361 Proton-conducting membrane transporter AMF_RS05790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMF_RS05790 PF00391 PEP-utilising enzyme, mobile domain AMF_RS05790 PF02896 PEP-utilising enzyme, TIM barrel domain AMF_RS05800 PF13419 Haloacid dehalogenase-like hydrolase AMF_RS05805 PF01336 OB-fold nucleic acid binding domain AMF_RS05805 PF00152 tRNA synthetases class II (D, K and N) AMF_RS05805 PF02938 GAD domain AMF_RS05810 PF04972 BON domain AMF_RS05815 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMF_RS05815 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMF_RS05820 PF07478 D-ala D-ala ligase C-terminus AMF_RS05820 PF01820 D-ala D-ala ligase N-terminus AMF_RS05830 PF00072 Response regulator receiver domain AMF_RS05830 PF02954 Bacterial regulatory protein, Fis family AMF_RS05830 PF00158 Sigma-54 interaction domain AMF_RS05840 PF01617 Surface antigen AMF_RS05845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMF_RS05845 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMF_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component AMF_RS05885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMF_RS05885 PF01411 tRNA synthetases class II (A) AMF_RS05895 PF00549 CoA-ligase AMF_RS05895 PF02629 CoA binding domain AMF_RS05900 PF08442 ATP-grasp domain AMF_RS05900 PF00549 CoA-ligase AMF_RS05905 PF01165 Ribosomal protein S21 AMF_RS05920 PF03060 Nitronate monooxygenase AMF_RS05925 PF01292 Prokaryotic cytochrome b561 AMF_RS05930 PF00528 Binding-protein-dependent transport system inner membrane component AMF_RS05935 PF00529 HlyD membrane-fusion protein of T1SS AMF_RS05935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMF_RS05945 PF08245 Mur ligase middle domain AMF_RS05950 PF04052 TolB amino-terminal domain AMF_RS05950 PF07676 WD40-like Beta Propeller Repeat AMF_RS05955 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMF_RS05955 PF17770 Ribonuclease J C-terminal domain AMF_RS05955 PF12706 Beta-lactamase superfamily domain AMF_RS05970 PF00164 Ribosomal protein S12/S23 AMF_RS05975 PF00177 Ribosomal protein S7p/S5e AMF_RS05980 PF03764 Elongation factor G, domain IV AMF_RS05980 PF00679 Elongation factor G C-terminus AMF_RS05980 PF14492 Elongation Factor G, domain II AMF_RS05980 PF00009 Elongation factor Tu GTP binding domain AMF_RS05980 PF03144 Elongation factor Tu domain 2 AMF_RS05985 PF00009 Elongation factor Tu GTP binding domain AMF_RS05985 PF03144 Elongation factor Tu domain 2 AMF_RS05985 PF03143 Elongation factor Tu C-terminal domain AMF_RS06000 PF00467 KOW motif AMF_RS06000 PF02357 Transcription termination factor nusG AMF_RS06005 PF00298 Ribosomal protein L11, RNA binding domain AMF_RS06005 PF03946 Ribosomal protein L11, N-terminal domain AMF_RS06010 PF00687 Ribosomal protein L1p/L10e family AMF_RS06015 PF00466 Ribosomal protein L10 AMF_RS06020 PF00542 Ribosomal protein L7/L12 C-terminal domain AMF_RS06025 PF04560 RNA polymerase Rpb2, domain 7 AMF_RS06025 PF00562 RNA polymerase Rpb2, domain 6 AMF_RS06025 PF04563 RNA polymerase beta subunit AMF_RS06025 PF04561 RNA polymerase Rpb2, domain 2 AMF_RS06025 PF04565 RNA polymerase Rpb2, domain 3 AMF_RS06025 PF10385 RNA polymerase beta subunit external 1 domain AMF_RS06030 PF00623 RNA polymerase Rpb1, domain 2 AMF_RS06030 PF04997 RNA polymerase Rpb1, domain 1 AMF_RS06030 PF04983 RNA polymerase Rpb1, domain 3 AMF_RS06030 PF05000 RNA polymerase Rpb1, domain 4 AMF_RS06030 PF04998 RNA polymerase Rpb1, domain 5 AMF_RS06035 PF01351 Ribonuclease HII AMF_RS06055 PF00155 Aminotransferase class I and II AMF_RS06065 PF03309 Type III pantothenate kinase AMF_RS06070 PF01180 Dihydroorotate dehydrogenase AMF_RS06075 PF01327 Polypeptide deformylase AMF_RS06080 PF02230 Phospholipase/Carboxylesterase AMF_RS06090 PF01243 Pyridoxamine 5'-phosphate oxidase AMF_RS06090 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMF_RS06095 PF02875 Mur ligase family, glutamate ligase domain AMF_RS06095 PF08245 Mur ligase middle domain AMF_RS06105 PF01053 Cys/Met metabolism PLP-dependent enzyme AMF_RS06120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMF_RS06120 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMF_RS06120 PF14579 Helix-hairpin-helix motif AMF_RS06120 PF02811 PHP domain AMF_RS06125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMF_RS06135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMF_RS06140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMF_RS06150 PF02581 Thiamine monophosphate synthase AMF_RS06150 PF08543 Phosphomethylpyrimidine kinase AMF_RS06160 PF01594 AI-2E family transporter AMF_RS06170 PF01479 S4 domain AMF_RS06170 PF00163 Ribosomal protein S4/S9 N-terminal domain AMF_RS06205 PF05698 Bacterial trigger factor protein (TF) C-terminus AMF_RS06205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMF_RS06205 PF05697 Bacterial trigger factor protein (TF) AMF_RS06210 PF00574 Clp protease AMF_RS06215 PF07724 AAA domain (Cdc48 subfamily) AMF_RS06215 PF10431 C-terminal, D2-small domain, of ClpB protein AMF_RS06215 PF06689 ClpX C4-type zinc finger AMF_RS06220 PF05362 Lon protease (S16) C-terminal proteolytic domain AMF_RS06220 PF00004 ATPase family associated with various cellular activities (AAA) AMF_RS06220 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMF_RS06230 PF02911 Formyl transferase, C-terminal domain AMF_RS06230 PF00551 Formyl transferase AMF_RS06235 PF00581 Rhodanese-like domain AMF_RS06235 PF17773 UPF0176 acylphosphatase like domain AMF_RS06240 PF03618 Kinase/pyrophosphorylase AMF_RS06250 PF02581 Thiamine monophosphate synthase AMF_RS06255 PF01595 Cyclin M transmembrane N-terminal domain AMF_RS06255 PF00571 CBS domain AMF_RS06255 PF03471 Transporter associated domain AMF_RS06265 PF17854 FtsK alpha domain AMF_RS06265 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMF_RS06265 PF09397 Ftsk gamma domain AMF_RS06265 PF01580 FtsK/SpoIIIE family AMF_RS06275 PF00202 Aminotransferase class-III AMF_RS06280 PF00989 PAS fold AMF_RS06280 PF00512 His Kinase A (phospho-acceptor) domain AMF_RS06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMF_RS06290 PF02472 Biopolymer transport protein ExbD/TolR AMF_RS06295 PF01618 MotA/TolQ/ExbB proton channel family AMF_RS06300 PF08676 MutL C terminal dimerisation domain AMF_RS06300 PF01119 DNA mismatch repair protein, C-terminal domain AMF_RS06305 PF17782 DprA winged helix domain AMF_RS06305 PF02481 DNA recombination-mediator protein A AMF_RS06325 PF02801 Beta-ketoacyl synthase, C-terminal domain AMF_RS06325 PF00109 Beta-ketoacyl synthase, N-terminal domain AMF_RS06330 PF00550 Phosphopantetheine attachment site AMF_RS06340 PF00471 Ribosomal protein L33 AMF_RS06350 PF02600 Disulfide bond formation protein DsbB AMF_RS06425 PF00580 UvrD/REP helicase N-terminal domain AMF_RS06425 PF13361 UvrD-like helicase C-terminal domain AMF_RS06435 PF00521 DNA gyrase/topoisomerase IV, subunit A AMF_RS06435 PF03989 DNA gyrase C-terminal domain, beta-propeller AMF_RS06440 PF00633 Helix-hairpin-helix motif AMF_RS06440 PF00730 HhH-GPD superfamily base excision DNA repair protein AMF_RS06440 PF10576 Iron-sulfur binding domain of endonuclease III AMF_RS06450 PF00183 Hsp90 protein AMF_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMF_RS06465 PF13662 Toprim domain AMF_RS06465 PF02132 RecR protein AMF_RS06470 PF00206 Lyase AMF_RS06470 PF10397 Adenylosuccinate lyase C-terminus AMF_RS06485 PF08459 UvrC Helix-hairpin-helix N-terminal AMF_RS06485 PF02151 UvrB/uvrC motif AMF_RS06485 PF01541 GIY-YIG catalytic domain AMF_RS06495 PF03099 Biotin/lipoate A/B protein ligase family AMF_RS06495 PF02237 Biotin protein ligase C terminal domain AMF_RS06510 PF00005 ABC transporter AMF_RS06510 PF12857 TOBE-like domain AMF_RS06515 PF02416 mttA/Hcf106 family AMF_RS06525 PF01297 Zinc-uptake complex component A periplasmic AMF_RS06530 PF00005 ABC transporter AMF_RS06535 PF03109 ABC1 family AMF_RS06545 PF04055 Radical SAM superfamily AMF_RS06545 PF00919 Uncharacterized protein family UPF0004 AMF_RS06560 PF16870 2-oxoglutarate dehydrogenase C-terminal AMF_RS06560 PF02779 Transketolase, pyrimidine binding domain AMF_RS06560 PF00676 Dehydrogenase E1 component AMF_RS06560 PF16078 2-oxoglutarate dehydrogenase N-terminus AMF_RS06570 PF00701 Dihydrodipicolinate synthetase family AMF_RS06575 PF01230 HIT domain AMF_RS06585 PF05190 MutS family domain IV AMF_RS06585 PF00488 MutS domain V AMF_RS06585 PF05192 MutS domain III AMF_RS06585 PF01624 MutS domain I AMF_RS06585 PF05188 MutS domain II AMF_RS06600 PF00083 Sugar (and other) transporter AMF_RS06600 PF07690 Major Facilitator Superfamily AMF_RS06605 PF02540 NAD synthase AMF_RS06605 PF00795 Carbon-nitrogen hydrolase AMF_RS06610 PF00490 Delta-aminolevulinic acid dehydratase AMF_RS06615 PF03717 Penicillin-binding Protein dimerisation domain AMF_RS06615 PF00905 Penicillin binding protein transpeptidase domain AMF_RS06625 PF07690 Major Facilitator Superfamily AMF_RS06630 PF00436 Single-strand binding protein family AMF_RS06640 PF02934 GatB/GatE catalytic domain AMF_RS06640 PF02637 GatB domain AMF_RS06655 PF08299 Bacterial dnaA protein helix-turn-helix AMF_RS06655 PF00308 Bacterial dnaA protein AMF_RS06655 PF11638 DnaA N-terminal domain AMF_RS06665 PF01467 Cytidylyltransferase-like AMF_RS06670 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMF_RS06680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMF_RS06680 PF12170 DNA polymerase III tau subunit V interacting with alpha AMF_RS06680 PF12169 DNA polymerase III subunits gamma and tau domain III AMF_RS06685 PF01300 Telomere recombination AMF_RS06685 PF03481 Putative GTP-binding controlling metal-binding AMF_RS06690 PF01121 Dephospho-CoA kinase AMF_RS06695 PF13667 ThiC-associated domain AMF_RS06695 PF01964 Radical SAM ThiC family AMF_RS06705 PF01192 RNA polymerase Rpb6 AMF_RS06715 PF08264 Anticodon-binding domain of tRNA AMF_RS06715 PF09334 tRNA synthetases class I (M) AMF_RS06715 PF00133 tRNA synthetases class I (I, L, M and V) AMF_RS06715 PF13603 Leucyl-tRNA synthetase, Domain 2 AMF_RS06720 PF01026 TatD related DNase AMF_RS06725 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMF_RS06730 PF03100 CcmE AMF_RS06735 PF01975 Survival protein SurE AMF_RS06740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMF_RS06745 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMF_RS06750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMF_RS06755 PF17760 UvrA interaction domain AMF_RS06755 PF17755 UvrA DNA-binding domain AMF_RS06760 PF01029 NusB family AMF_RS06765 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMF_RS06770 PF14849 YidC periplasmic domain AMF_RS06770 PF02096 60Kd inner membrane protein AMF_RS06775 PF01066 CDP-alcohol phosphatidyltransferase AMF_RS06780 PF02666 Phosphatidylserine decarboxylase AMF_RS06785 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMF_RS06795 PF03033 Glycosyltransferase family 28 N-terminal domain AMF_RS06795 PF04101 Glycosyltransferase family 28 C-terminal domain AMF_RS06800 PF01132 Elongation factor P (EF-P) OB domain AMF_RS06800 PF09285 Elongation factor P, C-terminal AMF_RS06800 PF08207 Elongation factor P (EF-P) KOW-like domain AMF_RS06810 PF01479 S4 domain AMF_RS06810 PF00849 RNA pseudouridylate synthase AMF_RS06815 PF00990 Diguanylate cyclase, GGDEF domain AMF_RS06815 PF00072 Response regulator receiver domain AMF_RS06835 PF06055 Exopolysaccharide synthesis, ExoD AMF_RS06840 PF01406 tRNA synthetases class I (C) catalytic domain AMF_RS06840 PF09190 DALR domain AMF_RS06845 PF00268 Ribonucleotide reductase, small chain AMF_RS06865 PF01807 CHC2 zinc finger AMF_RS06865 PF13662 Toprim domain AMF_RS06865 PF08275 DNA primase catalytic core, N-terminal domain AMF_RS06870 PF04539 Sigma-70 region 3 AMF_RS06870 PF04546 Sigma-70, non-essential region AMF_RS06870 PF03979 Sigma-70 factor, region 1.1 AMF_RS06870 PF00140 Sigma-70 factor, region 1.2 AMF_RS06870 PF04542 Sigma-70 region 2 AMF_RS06870 PF04545 Sigma-70, region 4 AMF_RS06875 PF01207 Dihydrouridine synthase (Dus) AMF_RS06880 PF08544 GHMP kinases C terminal AMF_RS06880 PF00288 GHMP kinases N terminal domain AMF_RS06900 PF00072 Response regulator receiver domain AMF_RS06900 PF00512 His Kinase A (phospho-acceptor) domain AMF_RS06900 PF08448 PAS fold AMF_RS06900 PF13188 PAS domain AMF_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMF_RS06915 PF01256 Carbohydrate kinase AMF_RS06915 PF03853 YjeF-related protein N-terminus AMF_RS06920 PF01396 Topoisomerase DNA binding C4 zinc finger AMF_RS06920 PF01131 DNA topoisomerase AMF_RS06920 PF13368 Topoisomerase C-terminal repeat AMF_RS06920 PF01751 Toprim domain AMF_RS06935 PF01648 4'-phosphopantetheinyl transferase superfamily AMF_RS06940 PF03129 Anticodon binding domain AMF_RS06940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMF_RS06955 PF01467 Cytidylyltransferase-like AMF_RS06960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMF_RS06965 PF00578 AhpC/TSA family AMF_RS06965 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMF_RS06970 PF00155 Aminotransferase class I and II AMF_RS06975 PF13145 PPIC-type PPIASE domain AMF_RS07010 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMF_RS07010 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMF_RS07015 PF00312 Ribosomal protein S15 AMF_RS07020 PF00013 KH domain AMF_RS07020 PF00575 S1 RNA binding domain AMF_RS07020 PF03725 3' exoribonuclease family, domain 2 AMF_RS07020 PF01138 3' exoribonuclease family, domain 1 AMF_RS07030 PF00009 Elongation factor Tu GTP binding domain AMF_RS07030 PF03144 Elongation factor Tu domain 2 AMF_RS07030 PF06421 GTP-binding protein LepA C-terminus AMF_RS07030 PF00679 Elongation factor G C-terminus AMF_RS07120 PF02769 AIR synthase related protein, C-terminal domain AMF_RS07120 PF00586 AIR synthase related protein, N-terminal domain AMF_RS07130 PF00202 Aminotransferase class-III AMF_RS07145 PF00398 Ribosomal RNA adenine dimethylase AMF_RS07155 PF00121 Triosephosphate isomerase AMF_RS07160 PF16868 NMT1-like family AMF_RS07165 PF00814 Glycoprotease family AMF_RS07175 PF02152 Dihydroneopterin aldolase AMF_RS07180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMF_RS07180 PF00056 lactate/malate dehydrogenase, NAD binding domain AMF_RS07195 PF11987 Translation-initiation factor 2 AMF_RS07195 PF00009 Elongation factor Tu GTP binding domain AMF_RS07205 PF02502 Ribose/Galactose Isomerase AMF_RS07210 PF08241 Methyltransferase domain AMF_RS07215 PF00814 Glycoprotease family AMF_RS07255 PF00171 Aldehyde dehydrogenase family AMF_RS07255 PF01619 Proline dehydrogenase AMF_RS07255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMF_RS07255 PF14850 DNA-binding domain of Proline dehydrogenase AMF_RS07265 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AMF_RS07265 PF14850 DNA-binding domain of Proline dehydrogenase AMF_RS07265 PF01619 Proline dehydrogenase AMF_RS07265 PF00171 Aldehyde dehydrogenase family AMF_RS07280 PF03330 Lytic transglycolase AMF_RS07285 PF03372 Endonuclease/Exonuclease/phosphatase family AMF_RS07295 PF00444 Ribosomal protein L36 AMF_RS07315 PF01016 Ribosomal L27 protein AMF_RS07320 PF00829 Ribosomal prokaryotic L21 protein AMF_RS07325 PF03952 Enolase, N-terminal domain AMF_RS07325 PF00113 Enolase, C-terminal TIM barrel domain AMF_RS07330 PF01018 GTP1/OBG AMF_RS07330 PF01926 50S ribosome-binding GTPase AMF_RS07335 PF00709 Adenylosuccinate synthetase AMF_RS07345 PF01795 MraW methylase family AMF_RS07350 PF01812 5-formyltetrahydrofolate cyclo-ligase family AMF_RS07385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMF_RS07390 PF01523 Putative modulator of DNA gyrase AMF_RS07395 PF01227 GTP cyclohydrolase I AMF_RS07400 PF00231 ATP synthase AMF_RS07405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMF_RS07415 PF00929 Exonuclease AMF_RS07420 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMF_RS07420 PF01078 Magnesium chelatase, subunit ChlI AMF_RS07440 PF00140 Sigma-70 factor, region 1.2 AMF_RS07440 PF04542 Sigma-70 region 2 AMF_RS07440 PF04545 Sigma-70, region 4 AMF_RS07460 PF00146 NADH dehydrogenase AMF_RS07465 PF00384 Molybdopterin oxidoreductase AMF_RS07465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMF_RS07465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMF_RS07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMF_RS07475 PF01751 Toprim domain AMF_RS07475 PF00204 DNA gyrase B AMF_RS07475 PF00986 DNA gyrase B subunit, carboxyl terminus AMF_RS07480 PF02441 Flavoprotein AMF_RS07485 PF03918 Cytochrome C biogenesis protein AMF_RS07495 PF00111 2Fe-2S iron-sulfur cluster binding domain AMF_RS07500 PF00012 Hsp70 protein AMF_RS07505 PF07743 HSCB C-terminal oligomerisation domain AMF_RS07505 PF00226 DnaJ domain AMF_RS07510 PF01521 Iron-sulphur cluster biosynthesis AMF_RS07515 PF01592 NifU-like N terminal domain AMF_RS07520 PF00266 Aminotransferase class-V AMF_RS07525 PF00266 Aminotransferase class-V AMF_RS07530 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMF_RS07535 PF01921 tRNA synthetases class I (K) AMF_RS07545 PF01416 tRNA pseudouridine synthase AMF_RS07550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMF_RS07550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMF_RS07555 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMF_RS07560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMF_RS07565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMF_RS07565 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMF_RS07585 PF01728 FtsJ-like methyltransferase AMF_RS07615 PF03485 Arginyl tRNA synthetase N terminal domain AMF_RS07615 PF05746 DALR anticodon binding domain AMF_RS07615 PF00750 tRNA synthetases class I (R) AMF_RS07620 PF02565 Recombination protein O C terminal AMF_RS07620 PF11967 Recombination protein O N terminal AMF_RS07635 PF00133 tRNA synthetases class I (I, L, M and V) AMF_RS07635 PF08264 Anticodon-binding domain of tRNA AMF_RS07640 PF00578 AhpC/TSA family AMF_RS07645 PF04452 RNA methyltransferase AMF_RS07660 PF00472 RF-1 domain AMF_RS07660 PF03462 PCRF domain AMF_RS07665 PF01709 Transcriptional regulator AMF_RS07670 PF01425 Amidase AMF_RS07675 PF02875 Mur ligase family, glutamate ligase domain AMF_RS07675 PF08245 Mur ligase middle domain AMF_RS07680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMF_RS07680 PF03900 Porphobilinogen deaminase, C-terminal domain AMF_RS07685 PF01565 FAD binding domain AMF_RS07685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMF_RS07695 PF12838 4Fe-4S dicluster domain AMF_RS07700 PF10502 Signal peptidase, peptidase S26 AMF_RS07705 PF01521 Iron-sulphur cluster biosynthesis AMF_RS07730 PF01617 Surface antigen AMF_RS07740 PF03144 Elongation factor Tu domain 2 AMF_RS07740 PF00009 Elongation factor Tu GTP binding domain AMF_RS07740 PF00679 Elongation factor G C-terminus AMF_RS07745 PF10431 C-terminal, D2-small domain, of ClpB protein AMF_RS07745 PF02861 Clp amino terminal domain, pathogenicity island component AMF_RS07745 PF17871 AAA lid domain AMF_RS07745 PF07724 AAA domain (Cdc48 subfamily) AMF_RS07745 PF00004 ATPase family associated with various cellular activities (AAA) AMF_RS07750 PF03741 Integral membrane protein TerC family AMF_RS07755 PF02033 Ribosome-binding factor A AMF_RS07760 PF00009 Elongation factor Tu GTP binding domain AMF_RS07760 PF11987 Translation-initiation factor 2 AMF_RS07765 PF00575 S1 RNA binding domain AMF_RS07765 PF13184 NusA-like KH domain AMF_RS07765 PF08529 NusA N-terminal domain AMF_RS07775 PF00873 AcrB/AcrD/AcrF family AMF_RS07780 PF00902 Sec-independent protein translocase protein (TatC) AMF_RS07785 PF04551 GcpE protein AMF_RS07795 PF13288 DXP reductoisomerase C-terminal domain AMF_RS07795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMF_RS07795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMF_RS07800 PF00361 Proton-conducting membrane transporter AMF_RS07805 PF00361 Proton-conducting membrane transporter AMF_RS07805 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMF_RS07810 PF00361 Proton-conducting membrane transporter AMF_RS07810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMF_RS07815 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMF_RS07820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMF_RS07825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMF_RS07825 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMF_RS07825 PF10531 SLBB domain AMF_RS07850 PF02646 RmuC family AMF_RS07855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMF_RS07855 PF02403 Seryl-tRNA synthetase N-terminal domain AMF_RS07865 PF01218 Coproporphyrinogen III oxidase AMF_RS07870 PF00696 Amino acid kinase family AMF_RS07875 PF01926 50S ribosome-binding GTPase AMF_RS07880 PF03462 PCRF domain AMF_RS07880 PF00472 RF-1 domain AMF_RS07885 PF01039 Carboxyl transferase domain AMF_RS07890 PF06827 Zinc finger found in FPG and IleRS AMF_RS07890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMF_RS07890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMF_RS07905 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMF_RS07935 PF02167 Cytochrome C1 family AMF_RS07940 PF00033 Cytochrome b/b6/petB AMF_RS07940 PF00032 Cytochrome b(C-terminal)/b6/petD AMF_RS07955 PF00950 ABC 3 transport family AMF_RS07965 PF00889 Elongation factor TS AMF_RS07970 PF00318 Ribosomal protein S2 AMF_RS07975 PF02545 Maf-like protein AMF_RS07980 PF01176 Translation initiation factor 1A / IF-1 AMF_RS07990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMF_RS07990 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMF_RS07995 PF13360 PQQ-like domain AMF_RS08000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMF_RS08000 PF01926 50S ribosome-binding GTPase AMF_RS08005 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AMF_RS08005 PF01676 Metalloenzyme superfamily AMF_RS08010 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMF_RS08010 PF00117 Glutamine amidotransferase class-I AMF_RS08015 PF02401 LytB protein AMF_RS08020 PF00692 dUTPase AMF_RS08025 PF02875 Mur ligase family, glutamate ligase domain AMF_RS08025 PF01225 Mur ligase family, catalytic domain AMF_RS08025 PF08245 Mur ligase middle domain AMF_RS08040 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AMF_RS08045 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AMF_RS08055 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AMF_RS08065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMF_RS08065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMF_RS08070 PF00528 Binding-protein-dependent transport system inner membrane component AMF_RS08080 PF04055 Radical SAM superfamily AMF_RS08100 PF02785 Biotin carboxylase C-terminal domain AMF_RS08100 PF00289 Biotin carboxylase, N-terminal domain AMF_RS08100 PF00364 Biotin-requiring enzyme AMF_RS08100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMF_RS08100 PF18140 Propionyl-coenzyme A carboxylase BT domain AMF_RS08105 PF00849 RNA pseudouridylate synthase AMF_RS08110 PF00830 Ribosomal L28 family AMF_RS08115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMF_RS08115 PF00270 DEAD/DEAH box helicase AMF_RS08115 PF00271 Helicase conserved C-terminal domain AMF_RS08115 PF17764 3′ DNA-binding domain (3′BD) AMF_RS08115 PF18074 Primosomal protein N C-terminal domain AMF_RS08145 PF01926 50S ribosome-binding GTPase AMF_RS08145 PF07650 KH domain AMF_RS08150 PF02978 Signal peptide binding domain AMF_RS08150 PF02881 SRP54-type protein, helical bundle domain AMF_RS08150 PF00448 SRP54-type protein, GTPase domain AMF_RS08160 PF03364 Polyketide cyclase / dehydrase and lipid transport AMF_RS08165 PF00012 Hsp70 protein AMF_RS08170 PF10150 Ribonuclease E/G family AMF_RS08170 PF12111 Polyribonucleotide phosphorylase C terminal AMF_RS08170 PF00575 S1 RNA binding domain AMF_RS08180 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AMF_RS08200 PF00456 Transketolase, thiamine diphosphate binding domain AMF_RS08200 PF02780 Transketolase, C-terminal domain AMF_RS08200 PF02779 Transketolase, pyrimidine binding domain AMF_RS08210 PF00691 OmpA family AMF_RS08215 PF00709 Adenylosuccinate synthetase AMF_RS08220 PF01018 GTP1/OBG AMF_RS08220 PF01926 50S ribosome-binding GTPase AMF_RS08225 PF03652 Holliday junction resolvase AMF_RS08230 PF03477 ATP cone domain AMF_RS08230 PF02867 Ribonucleotide reductase, barrel domain AMF_RS08230 PF00317 Ribonucleotide reductase, all-alpha domain AMF_RS08240 PF00348 Polyprenyl synthetase AMF_RS08250 PF01266 FAD dependent oxidoreductase AMF_RS08255 PF03796 DnaB-like helicase C terminal domain AMF_RS08255 PF00772 DnaB-like helicase N terminal domain AMF_RS08265 PF14437 MafB19-like deaminase AMF_RS08270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMF_RS08270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMF_RS08275 PF02504 Fatty acid synthesis protein AMF_RS08285 PF01702 Queuine tRNA-ribosyltransferase AMF_RS08290 PF00005 ABC transporter AMF_RS08295 PF05173 Dihydrodipicolinate reductase, C-terminus AMF_RS08295 PF01113 Dihydrodipicolinate reductase, N-terminus AMF_RS08300 PF01613 Flavin reductase like domain AMF_RS08305 PF01040 UbiA prenyltransferase family AMF_RS08335 PF00825 Ribonuclease P AMF_RS08350 PF03483 B3/4 domain AMF_RS08350 PF01588 Putative tRNA binding domain AMF_RS08350 PF03484 tRNA synthetase B5 domain AMF_RS08350 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMF_RS08350 PF03147 Ferredoxin-fold anticodon binding domain AMF_RS08355 PF01196 Ribosomal protein L17 AMF_RS08360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMF_RS08360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMF_RS08360 PF01000 RNA polymerase Rpb3/RpoA insert domain AMF_RS08365 PF00411 Ribosomal protein S11 AMF_RS08370 PF00416 Ribosomal protein S13/S18 AMF_RS08380 PF00344 SecY translocase AMF_RS08385 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMF_RS08390 PF00333 Ribosomal protein S5, N-terminal domain AMF_RS08390 PF03719 Ribosomal protein S5, C-terminal domain AMF_RS08395 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMF_RS08400 PF00347 Ribosomal protein L6 AMF_RS08405 PF00410 Ribosomal protein S8 AMF_RS08410 PF00253 Ribosomal protein S14p/S29e AMF_RS08415 PF00281 Ribosomal protein L5 AMF_RS08415 PF00673 ribosomal L5P family C-terminus AMF_RS08425 PF00238 Ribosomal protein L14p/L23e AMF_RS08430 PF00366 Ribosomal protein S17 AMF_RS08435 PF00831 Ribosomal L29 protein AMF_RS08440 PF00252 Ribosomal protein L16p/L10e AMF_RS08445 PF00189 Ribosomal protein S3, C-terminal domain AMF_RS08445 PF07650 KH domain AMF_RS08450 PF00237 Ribosomal protein L22p/L17e AMF_RS08455 PF00203 Ribosomal protein S19 AMF_RS08460 PF03947 Ribosomal Proteins L2, C-terminal domain AMF_RS08460 PF00181 Ribosomal Proteins L2, RNA binding domain AMF_RS08465 PF00276 Ribosomal protein L23 AMF_RS08470 PF00573 Ribosomal protein L4/L1 family AMF_RS08475 PF00297 Ribosomal protein L3 AMF_RS08480 PF00338 Ribosomal protein S10p/S20e AMF_RS08485 PF03144 Elongation factor Tu domain 2 AMF_RS08485 PF00009 Elongation factor Tu GTP binding domain AMF_RS08485 PF03143 Elongation factor Tu C-terminal domain AMF_RS08500 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMF_RS08500 PF00588 SpoU rRNA Methylase family AMF_RS08505 PF02224 Cytidylate kinase AMF_RS08510 PF00575 S1 RNA binding domain AMF_RS08515 PF01343 Peptidase family S49 AMF_RS08520 PF00216 Bacterial DNA-binding protein AMF_RS08540 PF00762 Ferrochelatase AMF_RS08545 PF03969 AFG1-like ATPase AMF_RS08570 PF12705 PD-(D/E)XK nuclease superfamily AMF_RS08570 PF13361 UvrD-like helicase C-terminal domain AMF_RS08570 PF00580 UvrD/REP helicase N-terminal domain AMF_RS08575 PF00107 Zinc-binding dehydrogenase AMF_RS08580 PF00005 ABC transporter AMF_RS08580 PF00664 ABC transporter transmembrane region AMF_RS08590 PF00809 Pterin binding enzyme AMF_RS08600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMF_RS08600 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMF_RS08600 PF02142 MGS-like domain AMF_RS08615 PF10415 Fumarase C C-terminus AMF_RS08615 PF00206 Lyase AMF_RS08620 PF02441 Flavoprotein AMF_RS08620 PF04127 DNA / pantothenate metabolism flavoprotein AMF_RS08625 PF01979 Amidohydrolase family AMF_RS08630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMF_RS08630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMF_RS08630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMF_RS08630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMF_RS08635 PF03099 Biotin/lipoate A/B protein ligase family AMF_RS08640 PF04002 RadC-like JAB domain AMF_RS08645 PF00166 Chaperonin 10 Kd subunit AMF_RS08650 PF00118 TCP-1/cpn60 chaperonin family AMF_RS08660 PF10431 C-terminal, D2-small domain, of ClpB protein AMF_RS08660 PF00004 ATPase family associated with various cellular activities (AAA) AMF_RS08660 PF07724 AAA domain (Cdc48 subfamily) AMF_RS08660 PF02861 Clp amino terminal domain, pathogenicity island component AMF_RS08660 PF17871 AAA lid domain AMF_RS08675 PF00775 Dioxygenase AMF_RS08685 PF00883 Cytosol aminopeptidase family, catalytic domain AMF_RS08685 PF02789 Cytosol aminopeptidase family, N-terminal domain AMF_RS08690 PF00551 Formyl transferase AMF_RS08705 PF01134 Glucose inhibited division protein A AMF_RS08705 PF13932 GidA associated domain AMF_RS08710 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AMF_RS08730 PF04055 Radical SAM superfamily AMF_RS08730 PF06968 Biotin and Thiamin Synthesis associated domain AMF_RS08735 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMF_RS08735 PF00586 AIR synthase related protein, N-terminal domain AMF_RS08735 PF02769 AIR synthase related protein, C-terminal domain AMF_RS08740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMF_RS08740 PF00809 Pterin binding enzyme AMF_RS08750 PF01435 Peptidase family M48 AMF_RS08770 PF00586 AIR synthase related protein, N-terminal domain AMF_RS08770 PF02769 AIR synthase related protein, C-terminal domain AMF_RS08775 PF00589 Phage integrase family AMF_RS08775 PF02899 Phage integrase, N-terminal SAM-like domain AMF_RS08780 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMF_RS08780 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMF_RS08790 PF01617 Surface antigen AMF_RS08795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMF_RS08795 PF07497 Rho termination factor, RNA-binding domain AMF_RS08795 PF07498 Rho termination factor, N-terminal domain AMF_RS08805 PF00227 Proteasome subunit AMF_RS08810 PF07724 AAA domain (Cdc48 subfamily) AMF_RS08810 PF00004 ATPase family associated with various cellular activities (AAA) AMF_RS08810 PF10431 C-terminal, D2-small domain, of ClpB protein AMF_RS08815 PF01209 ubiE/COQ5 methyltransferase family AMF_RS08820 PF08264 Anticodon-binding domain of tRNA AMF_RS08820 PF09334 tRNA synthetases class I (M) AMF_RS08825 PF13840 ACT domain AMF_RS08825 PF00696 Amino acid kinase family AMF_RS08835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMF_RS08835 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMF_RS08840 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMF_RS08845 PF01040 UbiA prenyltransferase family AMF_RS08850 PF13525 Outer membrane lipoprotein AMF_RS08855 PF02843 Phosphoribosylglycinamide synthetase, C domain AMF_RS08855 PF02844 Phosphoribosylglycinamide synthetase, N domain AMF_RS08855 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMF_RS08860 PF02699 Preprotein translocase subunit AMF_RS08865 PF01380 SIS domain AMF_RS08870 PF00712 DNA polymerase III beta subunit, N-terminal domain AMF_RS08870 PF02767 DNA polymerase III beta subunit, central domain AMF_RS08870 PF02768 DNA polymerase III beta subunit, C-terminal domain AMF_RS08880 PF00486 Transcriptional regulatory protein, C terminal AMF_RS08880 PF00072 Response regulator receiver domain AMF_RS08900 PF00719 Inorganic pyrophosphatase AMF_RS08905 PF00380 Ribosomal protein S9/S16 AMF_RS08910 PF00572 Ribosomal protein L13 AMF_RS08915 PF02321 Outer membrane efflux protein AMF_RS08925 PF10609 NUBPL iron-transfer P-loop NTPase AMF_RS08930 PF14572 Phosphoribosyl synthetase-associated domain AMF_RS08930 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMF_RS08935 PF02686 Glu-tRNAGln amidotransferase C subunit AMF_RS08940 PF00330 Aconitase family (aconitate hydratase) AMF_RS08940 PF00694 Aconitase C-terminal domain AMF_RS08945 PF04379 ApaG domain AMF_RS08950 PF02222 ATP-grasp domain AMF_RS08950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMF_RS09020 PF01145 SPFH domain / Band 7 family AMF_RS09020 PF12221 Bacterial membrane protein N terminal AMF_RS09025 PF01145 SPFH domain / Band 7 family AMF_RS09030 PF13180 PDZ domain AMF_RS09040 PF00035 Double-stranded RNA binding motif AMF_RS09040 PF14622 Ribonuclease-III-like AMF_RS09045 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMF_RS09075 PF05193 Peptidase M16 inactive domain AMF_RS09075 PF00675 Insulinase (Peptidase family M16) AMF_RS09080 PF01252 Signal peptidase (SPase) II AMF_RS09085 PF06574 FAD synthetase AMF_RS09085 PF01687 Riboflavin kinase AMF_RS09090 PF00462 Glutaredoxin AMF_RS09095 PF17827 PrmC N-terminal domain AMF_RS09095 PF05175 Methyltransferase small domain AMF_RS09100 PF00557 Metallopeptidase family M24 AMF_RS09105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMF_RS09105 PF02817 e3 binding domain AMF_RS09105 PF00364 Biotin-requiring enzyme AMF_RS09110 PF00132 Bacterial transferase hexapeptide (six repeats) AMF_RS09115 PF02569 Pantoate-beta-alanine ligase AMF_RS09120 PF00768 D-alanyl-D-alanine carboxypeptidase AMF_RS09120 PF07943 Penicillin-binding protein 5, C-terminal domain AMF_RS09135 PF02163 Peptidase family M50 AMF_RS09135 PF17820 PDZ domain AMF_RS09140 PF07244 Surface antigen variable number repeat AMF_RS09140 PF01103 Surface antigen AMF_RS09150 PF07977 FabA-like domain AMF_RS09155 PF01808 AICARFT/IMPCHase bienzyme AMF_RS09155 PF02142 MGS-like domain AMF_RS09160 PF01066 CDP-alcohol phosphatidyltransferase AMF_RS09165 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMF_RS09170 PF01464 Transglycosylase SLT domain AMF_RS09175 PF02104 SURF1 family AMF_RS09185 PF13685 Iron-containing alcohol dehydrogenase AMF_RS09190 PF00119 ATP synthase A chain AMF_RS09200 PF00137 ATP synthase subunit C AMF_RS09215 PF02491 SHS2 domain inserted in FTSA AMF_RS09220 PF02386 Cation transport protein AMF_RS09235 PF01434 Peptidase family M41 AMF_RS09235 PF06480 FtsH Extracellular AMF_RS09235 PF17862 AAA+ lid domain AMF_RS09235 PF00004 ATPase family associated with various cellular activities (AAA) AMF_RS09240 PF02810 SEC-C motif AMF_RS09240 PF07517 SecA DEAD-like domain AMF_RS09240 PF07516 SecA Wing and Scaffold domain AMF_RS09240 PF01043 SecA preprotein cross-linking domain AMF_RS09250 PF01545 Cation efflux family AMF_RS09265 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMF_RS09275 PF02881 SRP54-type protein, helical bundle domain AMF_RS09275 PF00448 SRP54-type protein, GTPase domain AMF_RS09280 PF18324 Hypothetical protein TT1725 AMF_RS09280 PF00180 Isocitrate/isopropylmalate dehydrogenase AMF_RS09285 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AMF_RS09285 PF17768 RecJ OB domain AMF_RS09285 PF02272 DHHA1 domain AMF_RS09285 PF01368 DHH family AMF_RS09290 PF12627 Probable RNA and SrmB- binding site of polymerase A AMF_RS09290 PF13735 tRNA nucleotidyltransferase domain 2 putative AMF_RS09290 PF01743 Poly A polymerase head domain AMF_RS09295 PF00334 Nucleoside diphosphate kinase AMF_RS09300 PF01381 Helix-turn-helix AMF_RS09325 PF01617 Surface antigen AMF_RS09400 PF01578 Cytochrome C assembly protein AMF_RS09400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMF_RS09405 PF08264 Anticodon-binding domain of tRNA AMF_RS09405 PF00133 tRNA synthetases class I (I, L, M and V) AMF_RS09410 PF01668 SmpB protein AMF_RS09415 PF00925 GTP cyclohydrolase II AMF_RS09415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMF_RS09420 PF01272 Transcription elongation factor, GreA/GreB, C-term AMF_RS09420 PF03449 Transcription elongation factor, N-terminal AMF_RS09425 PF00306 ATP synthase alpha/beta chain, C terminal domain AMF_RS09425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMF_RS09425 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMF_RS09430 PF00213 ATP synthase delta (OSCP) subunit AMF_RS09455 PF02687 FtsX-like permease family AMF_RS09455 PF12704 MacB-like periplasmic core domain AMF_RS09470 PF00285 Citrate synthase, C-terminal domain AMF_RS09475 PF00117 Glutamine amidotransferase class-I AMF_RS09475 PF00958 GMP synthase C terminal domain AMF_RS09485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMF_RS09485 PF00364 Biotin-requiring enzyme AMF_RS09485 PF02817 e3 binding domain AMF_RS09490 PF01791 DeoC/LacD family aldolase AMF_RS09500 PF03717 Penicillin-binding Protein dimerisation domain AMF_RS09500 PF00905 Penicillin binding protein transpeptidase domain AMF_RS09505 PF02355 Protein export membrane protein AMF_RS09505 PF07549 SecD/SecF GG Motif AMF_RS09510 PF02021 Uncharacterised protein family UPF0102 AMF_RS09515 PF00155 Aminotransferase class I and II AMF_RS09520 PF00579 tRNA synthetases class I (W and Y) AMF_RS09530 PF03951 Glutamine synthetase, beta-Grasp domain AMF_RS09530 PF00120 Glutamine synthetase, catalytic domain AMF_RS09535 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMF_RS09535 PF00953 Glycosyl transferase family 4 AMF_RS09540 PF00348 Polyprenyl synthetase AMF_RS09550 PF00005 ABC transporter AMF_RS09555 PF02405 Permease MlaE AMF_RS09560 PF00834 Ribulose-phosphate 3 epimerase family AMF_RS09565 PF01367 5'-3' exonuclease, C-terminal SAM fold AMF_RS09565 PF00476 DNA polymerase family A AMF_RS09565 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMF_RS09575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMF_RS09575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMF_RS09580 PF02463 RecF/RecN/SMC N terminal domain AMF_RS09625 PF03023 Lipid II flippase MurJ AMF_RS09630 PF01790 Prolipoprotein diacylglyceryl transferase AMF_RS09640 PF01649 Ribosomal protein S20 AMF_RS09650 PF01327 Polypeptide deformylase AMF_RS09655 PF03167 Uracil DNA glycosylase superfamily AMF_RS09685 PF02151 UvrB/uvrC motif AMF_RS09685 PF12344 Ultra-violet resistance protein B AMF_RS09685 PF00271 Helicase conserved C-terminal domain AMF_RS09685 PF17757 UvrB interaction domain AMF_RS09685 PF04851 Type III restriction enzyme, res subunit AMF_RS09690 PF02355 Protein export membrane protein AMF_RS09700 PF01617 Surface antigen AMF_RS09710 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AMF_RS09730 PF12327 FtsZ family, C-terminal domain AMF_RS09730 PF00091 Tubulin/FtsZ family, GTPase domain AMF_RS09740 PF02130 Uncharacterized protein family UPF0054 AMF_RS09745 PF13614 AAA domain AMF_RS09750 PF02195 ParB-like nuclease domain AMF_RS09750 PF17762 HTH domain found in ParB protein AMF_RS09755 PF05239 PRC-barrel domain AMF_RS09755 PF01782 RimM N-terminal domain AMF_RS09760 PF01746 tRNA (Guanine-1)-methyltransferase AMF_RS09765 PF01245 Ribosomal protein L19 AMF_RS09770 PF02464 Competence-damaged protein AMF_RS09770 PF18146 Damage-inducible protein CinA KH domain AMF_RS09770 PF00994 Probable molybdopterin binding domain AMF_RS09775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMF_RS09775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMF_RS09775 PF03129 Anticodon binding domain AMF_RS09780 PF00707 Translation initiation factor IF-3, C-terminal domain AMF_RS09780 PF05198 Translation initiation factor IF-3, N-terminal domain AMF_RS09785 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AMF_RS09790 PF01027 Inhibitor of apoptosis-promoting Bax1 AMF_RS09795 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMF_RS09795 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMF_RS09800 PF02575 YbaB/EbfC DNA-binding family AMF_RS09805 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMF_RS09805 PF12170 DNA polymerase III tau subunit V interacting with alpha AMF_RS09805 PF12169 DNA polymerase III subunits gamma and tau domain III AMF_RS09810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMF_RS09810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMF_RS09825 PF01098 Cell cycle protein AMF_RS09830 PF02772 S-adenosylmethionine synthetase, central domain AMF_RS09830 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMF_RS09830 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMF_RS09840 PF01494 FAD binding domain AMF_RS09855 PF02091 Glycyl-tRNA synthetase alpha subunit AMF_RS09860 PF05746 DALR anticodon binding domain AMF_RS09860 PF02092 Glycyl-tRNA synthetase beta subunit AMF_RS09865 PF00226 DnaJ domain AMF_RS09865 PF01556 DnaJ C terminal domain AMF_RS09865 PF00684 DnaJ central domain AMF_RS09870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AMF_RS09870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AMF_RS09875 PF02660 Glycerol-3-phosphate acyltransferase AMF_RS09880 PF02075 Crossover junction endodeoxyribonuclease RuvC AMF_RS09885 PF00510 Cytochrome c oxidase subunit III AMF_RS09890 PF01208 Uroporphyrinogen decarboxylase (URO-D) AMF_RS09895 PF00571 CBS domain AMF_RS09895 PF03471 Transporter associated domain AMF_RS09905 PF04860 Phage portal protein AMF_RS09915 PF02445 Quinolinate synthetase A protein AMF_RS09920 PF00037 4Fe-4S binding domain AMF_RS09920 PF11953 Domain of unknown function (DUF3470) AMF_RS09925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMF_RS09925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMF_RS09930 PF05198 Translation initiation factor IF-3, N-terminal domain AMF_RS09930 PF00707 Translation initiation factor IF-3, C-terminal domain AMF_RS09935 PF02534 Type IV secretory system Conjugative DNA transfer AMF_RS09940 PF00437 Type II/IV secretion system protein AMF_RS09945 PF03743 Bacterial conjugation TrbI-like protein AMF_RS09960 PF00925 GTP cyclohydrolase II AMF_RS09970 PF01209 ubiE/COQ5 methyltransferase family AMF_RS09980 PF01678 Diaminopimelate epimerase AMF_RS09995 PF00162 Phosphoglycerate kinase AMF_RS10000 PF02601 Exonuclease VII, large subunit AMF_RS10000 PF13742 OB-fold nucleic acid binding domain AMF_RS10010 PF14602 Hexapeptide repeat of succinyl-transferase AMF_RS10010 PF00132 Bacterial transferase hexapeptide (six repeats) AMF_RS10010 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMF_RS10015 PF12631 MnmE helical domain AMF_RS10015 PF01926 50S ribosome-binding GTPase AMF_RS10015 PF10396 GTP-binding protein TrmE N-terminus AMF_RS10020 PF02441 Flavoprotein AMF_RS10020 PF04127 DNA / pantothenate metabolism flavoprotein AMF_RS10025 PF17191 RecG wedge domain AMF_RS10025 PF00270 DEAD/DEAH box helicase AMF_RS10025 PF00271 Helicase conserved C-terminal domain AMF_RS10030 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AMF_RS10035 PF00156 Phosphoribosyl transferase domain AMF_RS10035 PF13537 Glutamine amidotransferase domain AMF_RS10040 PF01195 Peptidyl-tRNA hydrolase AMF_RS10045 PF14693 Ribosomal protein TL5, C-terminal domain AMF_RS10045 PF01386 Ribosomal L25p family AMF_RS10070 PF00156 Phosphoribosyl transferase domain AMF_RS10075 PF07687 Peptidase dimerisation domain AMF_RS10075 PF01546 Peptidase family M20/M25/M40 AMF_RS10080 PF02254 TrkA-N domain AMF_RS10080 PF00999 Sodium/hydrogen exchanger family AMF_RS10090 PF03653 Uncharacterised protein family (UPF0093) AMF_RS10095 PF02779 Transketolase, pyrimidine binding domain AMF_RS10095 PF00364 Biotin-requiring enzyme AMF_RS10095 PF02780 Transketolase, C-terminal domain AMF_RS10110 PF01523 Putative modulator of DNA gyrase AMF_RS10115 PF06071 Protein of unknown function (DUF933) AMF_RS10115 PF01926 50S ribosome-binding GTPase AMF_RS10120 PF02542 YgbB family AMF_RS10125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMF_RS10125 PF02542 YgbB family