AMF_RS05075	SM01001	AIR carboxylase
AMF_RS05090	SM00411	bacterial (prokaryotic) histone like domain
AMF_RS05150	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05155	SM00919	Malic enzyme, NAD binding domain
AMF_RS05155	SM01274	AMF_RS05155
AMF_RS05285	SM00357	Cold shock protein domain
AMF_RS05285	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05285	SM00959	Rho termination factor, N-terminal domain
AMF_RS05375	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05450	SM00116	Domain in cystathionine beta-synthase and other proteins.
AMF_RS05450	SM01240	AMF_RS05450
AMF_RS05465	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AMF_RS05480	SM00978	AMF_RS05480
AMF_RS05525	SM00487	DEAD-like helicases superfamily
AMF_RS05525	SM00490	helicase superfamily c-terminal domain
AMF_RS05525	SM00982	AMF_RS05525
AMF_RS05525	SM01058	CarD-like/TRCF domain
AMF_RS05595	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05615	SM00357	Cold shock protein domain
AMF_RS05620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AMF_RS05620	SM00387	Histidine kinase-like ATPases
AMF_RS05620	SM00388	His Kinase A (phosphoacceptor) domain
AMF_RS05625	SM00474	3'-5' exonuclease
AMF_RS05630	SM00292	breast cancer carboxy-terminal domain
AMF_RS05630	SM00532	Ligase N family
AMF_RS05650	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05685	SM01219	AMF_RS05685
AMF_RS05690	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05715	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05730	SM00072	Guanylate kinase homologues.
AMF_RS05810	SM00749	bacterial OsmY and nodulation domain
AMF_RS05830	SM00382	ATPases associated with a variety of cellular activities
AMF_RS05830	SM00448	cheY-homologous receiver domain
AMF_RS05870	SM00849	Metallo-beta-lactamase superfamily
AMF_RS05875	SM01230	AMF_RS05875
AMF_RS05885	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AMF_RS05895	SM00881	CoA binding domain
AMF_RS05955	SM00849	Metallo-beta-lactamase superfamily
AMF_RS05980	SM00838	Elongation factor G C-terminus
AMF_RS05980	SM00889	Elongation factor G, domain IV
AMF_RS06000	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AMF_RS06005	SM00649	Ribosomal protein L11/L12
AMF_RS06030	SM00663	RNA polymerase I subunit A N-terminus
AMF_RS06120	SM00481	DNA polymerase alpha chain like domain
AMF_RS06170	SM00363	S4 RNA-binding domain
AMF_RS06170	SM01390	AMF_RS06170
AMF_RS06215	SM00382	ATPases associated with a variety of cellular activities
AMF_RS06215	SM00994	ClpX C4-type zinc finger
AMF_RS06215	SM01086	C-terminal, D2-small domain, of ClpB protein
AMF_RS06220	SM00382	ATPases associated with a variety of cellular activities
AMF_RS06220	SM00464	Found in ATP-dependent protease La (LON)
AMF_RS06235	SM00450	Rhodanese Homology Domain
AMF_RS06255	SM01091	Transporter associated domain
AMF_RS06265	SM00843	AMF_RS06265
AMF_RS06280	SM00387	Histidine kinase-like ATPases
AMF_RS06280	SM00388	His Kinase A (phosphoacceptor) domain
AMF_RS06300	SM00853	MutL C terminal dimerisation domain
AMF_RS06300	SM01340	AMF_RS06300
AMF_RS06325	SM00825	Beta-ketoacyl synthase
AMF_RS06435	SM00434	DNA Topoisomerase IV
AMF_RS06440	SM00478	endonuclease III
AMF_RS06440	SM00525	AMF_RS06440
AMF_RS06450	SM00387	Histidine kinase-like ATPases
AMF_RS06470	SM00998	Adenylosuccinate lyase C-terminus
AMF_RS06485	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AMF_RS06485	SM00465	GIY-YIG type nucleases (URI domain)
AMF_RS06510	SM00382	ATPases associated with a variety of cellular activities
AMF_RS06530	SM00382	ATPases associated with a variety of cellular activities
AMF_RS06545	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMF_RS06560	SM00861	Transketolase, pyrimidine binding domain
AMF_RS06570	SM01130	AMF_RS06570
AMF_RS06585	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AMF_RS06585	SM00534	ATPase domain of DNA mismatch repair MUTS family
AMF_RS06610	SM01004	Delta-aminolevulinic acid dehydratase
AMF_RS06640	SM00845	GatB domain
AMF_RS06655	SM00382	ATPases associated with a variety of cellular activities
AMF_RS06655	SM00760	Bacterial dnaA protein helix-turn-helix domain
AMF_RS06675	SM00411	bacterial (prokaryotic) histone like domain
AMF_RS06705	SM01409	AMF_RS06705
AMF_RS06725	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AMF_RS06800	SM00841	Elongation factor P, C-terminal
AMF_RS06800	SM01185	AMF_RS06800
AMF_RS06810	SM00363	S4 RNA-binding domain
AMF_RS06815	SM00267	diguanylate cyclase
AMF_RS06815	SM00448	cheY-homologous receiver domain
AMF_RS06840	SM00840	AMF_RS06840
AMF_RS06865	SM00400	zinc finger
AMF_RS06865	SM00493	AMF_RS06865
AMF_RS06900	SM00387	Histidine kinase-like ATPases
AMF_RS06900	SM00388	His Kinase A (phosphoacceptor) domain
AMF_RS06900	SM00448	cheY-homologous receiver domain
AMF_RS06920	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AMF_RS06920	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AMF_RS06920	SM00493	AMF_RS06920
AMF_RS07015	SM01387	AMF_RS07015
AMF_RS07020	SM00316	Ribosomal protein S1-like RNA-binding domain
AMF_RS07020	SM00322	K homology RNA-binding domain
AMF_RS07030	SM00838	Elongation factor G C-terminus
AMF_RS07145	SM00650	Ribosomal RNA adenine dimethylases
AMF_RS07175	SM00905	Dihydroneopterin aldolase
AMF_RS07260	SM00822	AMF_RS07260
AMF_RS07325	SM01192	AMF_RS07325
AMF_RS07325	SM01193	AMF_RS07325
AMF_RS07415	SM00479	AMF_RS07415
AMF_RS07420	SM00382	ATPases associated with a variety of cellular activities
AMF_RS07455	SM00248	ankyrin repeats
AMF_RS07465	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AMF_RS07475	SM00387	Histidine kinase-like ATPases
AMF_RS07475	SM00433	TopoisomeraseII
AMF_RS07505	SM00271	DnaJ molecular chaperone homology domain
AMF_RS07565	SM00382	ATPases associated with a variety of cellular activities
AMF_RS07575	SM00116	Domain in cystathionine beta-synthase and other proteins.
AMF_RS07575	SM00924	MgtE intracellular N domain
AMF_RS07615	SM00836	DALR anticodon binding domain
AMF_RS07615	SM01016	Arginyl tRNA synthetase N terminal dom
AMF_RS07660	SM00937	AMF_RS07660
AMF_RS07690	SM00248	ankyrin repeats
AMF_RS07740	SM00838	Elongation factor G C-terminus
AMF_RS07745	SM00382	ATPases associated with a variety of cellular activities
AMF_RS07745	SM01086	C-terminal, D2-small domain, of ClpB protein
AMF_RS07765	SM00316	Ribosomal protein S1-like RNA-binding domain
AMF_RS07765	SM00322	K homology RNA-binding domain
AMF_RS07825	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AMF_RS07880	SM00937	AMF_RS07880
AMF_RS07890	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AMF_RS07890	SM01232	AMF_RS07890
AMF_RS07995	SM00564	beta-propeller repeat
AMF_RS08010	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AMF_RS08055	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08080	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMF_RS08100	SM00878	Biotin carboxylase C-terminal domain
AMF_RS08105	SM00363	S4 RNA-binding domain
AMF_RS08115	SM00487	DEAD-like helicases superfamily
AMF_RS08115	SM00490	helicase superfamily c-terminal domain
AMF_RS08150	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08150	SM00962	SRP54-type protein, GTPase domain
AMF_RS08150	SM00963	SRP54-type protein, helical bundle domain
AMF_RS08200	SM00861	Transketolase, pyrimidine binding domain
AMF_RS08215	SM00788	Adenylosuccinate synthetase
AMF_RS08225	SM00732	Likely ribonuclease with RNase H fold.
AMF_RS08290	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08300	SM00903	Flavin reductase like domain
AMF_RS08350	SM00873	B3/4 domain
AMF_RS08350	SM00874	tRNA synthetase B5 domain
AMF_RS08350	SM00896	Ferredoxin-fold anticodon binding domain
AMF_RS08360	SM00662	RNA polymerases D
AMF_RS08425	SM01374	AMF_RS08425
AMF_RS08445	SM00322	K homology RNA-binding domain
AMF_RS08460	SM01382	AMF_RS08460
AMF_RS08460	SM01383	AMF_RS08460
AMF_RS08480	SM01403	AMF_RS08480
AMF_RS08500	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AMF_RS08510	SM00316	Ribosomal protein S1-like RNA-binding domain
AMF_RS08520	SM00411	bacterial (prokaryotic) histone like domain
AMF_RS08560	SM00244	prohibitin homologues
AMF_RS08565	SM00248	ankyrin repeats
AMF_RS08575	SM00829	Enoylreductase
AMF_RS08580	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08600	SM00851	MGS-like domain
AMF_RS08600	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AMF_RS08645	SM00883	Chaperonin 10 Kd subunit
AMF_RS08660	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08660	SM01086	C-terminal, D2-small domain, of ClpB protein
AMF_RS08700	SM01211	AMF_RS08700
AMF_RS08705	SM01228	AMF_RS08705
AMF_RS08730	SM00729	Elongator protein 3, MiaB family, Radical SAM
AMF_RS08730	SM00876	Biotin and Thiamin Synthesis associated domain
AMF_RS08750	SM00028	Tetratricopeptide repeats
AMF_RS08795	SM00357	Cold shock protein domain
AMF_RS08795	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08795	SM00959	Rho termination factor, N-terminal domain
AMF_RS08810	SM00382	ATPases associated with a variety of cellular activities
AMF_RS08810	SM01086	C-terminal, D2-small domain, of ClpB protein
AMF_RS08855	SM01209	AMF_RS08855
AMF_RS08855	SM01210	AMF_RS08855
AMF_RS08860	SM01323	AMF_RS08860
AMF_RS08870	SM00480	DNA polymerase III beta subunit
AMF_RS08875	SM00474	3'-5' exonuclease
AMF_RS08880	SM00448	cheY-homologous receiver domain
AMF_RS08880	SM00862	Transcriptional regulatory protein, C terminal
AMF_RS08890	SM00530	Helix-turn-helix XRE-family like proteins 
AMF_RS08930	SM01400	AMF_RS08930
AMF_RS09020	SM00244	prohibitin homologues
AMF_RS09025	SM00244	prohibitin homologues
AMF_RS09030	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AMF_RS09040	SM00358	Double-stranded RNA binding motif
AMF_RS09040	SM00535	Ribonuclease III family
AMF_RS09085	SM00904	Riboflavin kinase
AMF_RS09120	SM00936	Penicillin-binding protein 5, C-terminal domain 
AMF_RS09135	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AMF_RS09145	SM00935	Outer membrane protein (OmpH-like)
AMF_RS09155	SM00798	AICARFT/IMPCHase bienzyme
AMF_RS09155	SM00851	MGS-like domain
AMF_RS09215	SM00842	Cell division protein FtsA
AMF_RS09235	SM00382	ATPases associated with a variety of cellular activities
AMF_RS09240	SM00957	SecA DEAD-like domain
AMF_RS09240	SM00958	SecA preprotein cross-linking domain
AMF_RS09275	SM00382	ATPases associated with a variety of cellular activities
AMF_RS09275	SM00962	SRP54-type protein, GTPase domain
AMF_RS09275	SM00963	SRP54-type protein, helical bundle domain
AMF_RS09280	SM01329	AMF_RS09280
AMF_RS09295	SM00562	AMF_RS09295
AMF_RS09300	SM00530	Helix-turn-helix XRE-family like proteins 
AMF_RS09335	SM00932	Scaffold protein Nfu/NifU N terminal
AMF_RS09490	SM01133	AMF_RS09490
AMF_RS09530	SM01230	AMF_RS09530
AMF_RS09550	SM00382	ATPases associated with a variety of cellular activities
AMF_RS09565	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AMF_RS09565	SM00475	5'-3' exonuclease
AMF_RS09565	SM00482	DNA polymerase A domain
AMF_RS09645	SM00563	Phosphate acyltransferases
AMF_RS09655	SM00986	Uracil DNA glycosylase superfamily
AMF_RS09655	SM00987	UreE urease accessory protein, C-terminal domain 
AMF_RS09685	SM00487	DEAD-like helicases superfamily
AMF_RS09685	SM00490	helicase superfamily c-terminal domain
AMF_RS09730	SM00864	Tubulin/FtsZ family, GTPase domain
AMF_RS09730	SM00865	Tubulin/FtsZ family, C-terminal domain
AMF_RS09750	SM00470	ParB-like nuclease domain
AMF_RS09775	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AMF_RS09795	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AMF_RS09805	SM00382	ATPases associated with a variety of cellular activities
AMF_RS09810	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AMF_RS09865	SM00271	DnaJ molecular chaperone homology domain
AMF_RS09875	SM01207	AMF_RS09875
AMF_RS09895	SM01091	Transporter associated domain
AMF_RS09970	SM00028	Tetratricopeptide repeats
AMF_RS10025	SM00487	DEAD-like helicases superfamily
AMF_RS10025	SM00490	helicase superfamily c-terminal domain
AMF_RS10095	SM00861	Transketolase, pyrimidine binding domain
AMF_RS10140	SM00271	DnaJ molecular chaperone homology domain
