APH_RS00005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APH_RS00005 SM00475 5'-3' exonuclease APH_RS00005 SM00482 DNA polymerase A domain APH_RS00020 SM00382 ATPases associated with a variety of cellular activities APH_RS00075 SM00271 DnaJ molecular chaperone homology domain APH_RS00085 SM01207 APH_RS00085 APH_RS00105 SM01091 Transporter associated domain APH_RS00190 SM00382 ATPases associated with a variety of cellular activities APH_RS00195 SM00919 Malic enzyme, NAD binding domain APH_RS00195 SM01274 APH_RS00195 APH_RS00300 SM00357 Cold shock protein domain APH_RS00300 SM00382 ATPases associated with a variety of cellular activities APH_RS00300 SM00959 Rho termination factor, N-terminal domain APH_RS00310 SM00271 DnaJ molecular chaperone homology domain APH_RS00315 SM00932 Scaffold protein Nfu/NifU N terminal APH_RS00415 SM00116 Domain in cystathionine beta-synthase and other proteins. APH_RS00415 SM01240 APH_RS00415 APH_RS00435 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APH_RS00455 SM00978 APH_RS00455 APH_RS00505 SM00487 DEAD-like helicases superfamily APH_RS00505 SM00490 helicase superfamily c-terminal domain APH_RS00505 SM00982 APH_RS00505 APH_RS00505 SM01058 CarD-like/TRCF domain APH_RS00575 SM00865 Tubulin/FtsZ family, C-terminal domain APH_RS00605 SM00357 Cold shock protein domain APH_RS00610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APH_RS00610 SM00387 Histidine kinase-like ATPases APH_RS00610 SM00388 His Kinase A (phosphoacceptor) domain APH_RS00615 SM00474 3'-5' exonuclease APH_RS00620 SM00292 breast cancer carboxy-terminal domain APH_RS00620 SM00532 Ligase N family APH_RS00660 SM00072 Guanylate kinase homologues. APH_RS00695 SM01219 APH_RS00695 APH_RS00700 SM00382 ATPases associated with a variety of cellular activities APH_RS00745 SM00382 ATPases associated with a variety of cellular activities APH_RS00760 SM00072 Guanylate kinase homologues. APH_RS00845 SM00749 bacterial OsmY and nodulation domain APH_RS00860 SM00382 ATPases associated with a variety of cellular activities APH_RS00860 SM00448 cheY-homologous receiver domain APH_RS00955 SM00729 Elongator protein 3, MiaB family, Radical SAM APH_RS00955 SM00876 Biotin and Thiamin Synthesis associated domain APH_RS00980 SM01228 APH_RS00980 APH_RS00985 SM01211 APH_RS00985 APH_RS01035 SM00382 ATPases associated with a variety of cellular activities APH_RS01035 SM01086 C-terminal, D2-small domain, of ClpB protein APH_RS01060 SM00883 Chaperonin 10 Kd subunit APH_RS01095 SM00851 MGS-like domain APH_RS01095 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APH_RS01105 SM00382 ATPases associated with a variety of cellular activities APH_RS01110 SM00829 Enoylreductase APH_RS01125 SM00244 prohibitin homologues APH_RS01185 SM00316 Ribosomal protein S1-like RNA-binding domain APH_RS01195 SM00967 RNA 2'-O ribose methyltransferase substrate binding APH_RS01215 SM01403 APH_RS01215 APH_RS01235 SM01382 APH_RS01235 APH_RS01235 SM01383 APH_RS01235 APH_RS01250 SM00322 K homology RNA-binding domain APH_RS01270 SM01374 APH_RS01270 APH_RS01275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APH_RS01335 SM00662 RNA polymerases D APH_RS01345 SM00873 B3/4 domain APH_RS01345 SM00874 tRNA synthetase B5 domain APH_RS01345 SM00896 Ferredoxin-fold anticodon binding domain APH_RS01370 SM00903 Flavin reductase like domain APH_RS01375 SM00382 ATPases associated with a variety of cellular activities APH_RS01425 SM00861 Transketolase, pyrimidine binding domain APH_RS01455 SM00732 Likely ribonuclease with RNase H fold. APH_RS01460 SM00788 Adenylosuccinate synthetase APH_RS01480 SM00861 Transketolase, pyrimidine binding domain APH_RS01530 SM00382 ATPases associated with a variety of cellular activities APH_RS01530 SM00962 SRP54-type protein, GTPase domain APH_RS01530 SM00963 SRP54-type protein, helical bundle domain APH_RS01570 SM00487 DEAD-like helicases superfamily APH_RS01570 SM00490 helicase superfamily c-terminal domain APH_RS01590 SM00878 Biotin carboxylase C-terminal domain APH_RS01605 SM00729 Elongator protein 3, MiaB family, Radical SAM APH_RS01630 SM00382 ATPases associated with a variety of cellular activities APH_RS01675 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APH_RS01725 SM00564 beta-propeller repeat APH_RS01825 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APH_RS01825 SM01232 APH_RS01825 APH_RS01845 SM00382 ATPases associated with a variety of cellular activities APH_RS01850 SM00937 APH_RS01850 APH_RS01920 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APH_RS01980 SM00316 Ribosomal protein S1-like RNA-binding domain APH_RS01980 SM00322 K homology RNA-binding domain APH_RS02005 SM00382 ATPases associated with a variety of cellular activities APH_RS02005 SM01086 C-terminal, D2-small domain, of ClpB protein APH_RS02010 SM00838 Elongation factor G C-terminus APH_RS02060 SM00937 APH_RS02060 APH_RS02070 SM00845 GatB domain APH_RS02090 SM00382 ATPases associated with a variety of cellular activities APH_RS02090 SM00760 Bacterial dnaA protein helix-turn-helix domain APH_RS02105 SM00937 APH_RS02105 APH_RS02160 SM00382 ATPases associated with a variety of cellular activities APH_RS02170 SM00116 Domain in cystathionine beta-synthase and other proteins. APH_RS02170 SM00924 MgtE intracellular N domain APH_RS02230 SM01409 APH_RS02230 APH_RS02275 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APH_RS02355 SM00841 Elongation factor P, C-terminal APH_RS02355 SM01185 APH_RS02355 APH_RS02365 SM00363 S4 RNA-binding domain APH_RS02370 SM00267 diguanylate cyclase APH_RS02370 SM00448 cheY-homologous receiver domain APH_RS02395 SM00840 APH_RS02395 APH_RS02430 SM00400 zinc finger APH_RS02430 SM00493 APH_RS02430 APH_RS02435 SM00534 ATPase domain of DNA mismatch repair MUTS family APH_RS02470 SM00387 Histidine kinase-like ATPases APH_RS02470 SM00388 His Kinase A (phosphoacceptor) domain APH_RS02470 SM00448 cheY-homologous receiver domain APH_RS02510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APH_RS02510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APH_RS02510 SM00493 APH_RS02510 APH_RS02600 SM00650 Ribosomal RNA adenine dimethylases APH_RS02630 SM00905 Dihydroneopterin aldolase APH_RS02785 SM00822 APH_RS02785 APH_RS02890 SM01192 APH_RS02890 APH_RS02890 SM01193 APH_RS02890 APH_RS02915 SM00836 DALR anticodon binding domain APH_RS02915 SM01016 Arginyl tRNA synthetase N terminal dom APH_RS02940 SM00248 ankyrin repeats APH_RS02950 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APH_RS02960 SM00387 Histidine kinase-like ATPases APH_RS02960 SM00433 TopoisomeraseII APH_RS03005 SM00479 APH_RS03005 APH_RS03050 SM00248 ankyrin repeats APH_RS03095 SM00382 ATPases associated with a variety of cellular activities APH_RS03120 SM00838 Elongation factor G C-terminus APH_RS03130 SM00316 Ribosomal protein S1-like RNA-binding domain APH_RS03130 SM00322 K homology RNA-binding domain APH_RS03135 SM01387 APH_RS03135 APH_RS03185 SM00382 ATPases associated with a variety of cellular activities APH_RS03190 SM00411 bacterial (prokaryotic) histone like domain APH_RS03405 SM01004 Delta-aminolevulinic acid dehydratase APH_RS03425 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APH_RS03425 SM00534 ATPase domain of DNA mismatch repair MUTS family APH_RS03445 SM00861 Transketolase, pyrimidine binding domain APH_RS03455 SM00998 Adenylosuccinate lyase C-terminus APH_RS03500 SM00729 Elongator protein 3, MiaB family, Radical SAM APH_RS03520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APH_RS03520 SM00465 GIY-YIG type nucleases (URI domain) APH_RS03525 SM00387 Histidine kinase-like ATPases APH_RS03550 SM00478 endonuclease III APH_RS03550 SM00525 APH_RS03550 APH_RS03555 SM00434 DNA Topoisomerase IV APH_RS03680 SM00248 ankyrin repeats APH_RS03690 SM00825 Beta-ketoacyl synthase APH_RS03725 SM00853 MutL C terminal dimerisation domain APH_RS03725 SM01340 APH_RS03725 APH_RS03745 SM00387 Histidine kinase-like ATPases APH_RS03745 SM00388 His Kinase A (phosphoacceptor) domain APH_RS03770 SM00843 APH_RS03770 APH_RS03780 SM01091 Transporter associated domain APH_RS03795 SM00450 Rhodanese Homology Domain APH_RS03820 SM00382 ATPases associated with a variety of cellular activities APH_RS03820 SM00464 Found in ATP-dependent protease La (LON) APH_RS03825 SM00382 ATPases associated with a variety of cellular activities APH_RS03825 SM00994 ClpX C4-type zinc finger APH_RS03825 SM01086 C-terminal, D2-small domain, of ClpB protein APH_RS03890 SM00382 ATPases associated with a variety of cellular activities APH_RS03905 SM00382 ATPases associated with a variety of cellular activities APH_RS03915 SM00493 APH_RS03915 APH_RS03920 SM00363 S4 RNA-binding domain APH_RS03920 SM01390 APH_RS03920 APH_RS03975 SM00481 DNA polymerase alpha chain like domain APH_RS04055 SM00663 RNA polymerase I subunit A N-terminus APH_RS04080 SM00649 Ribosomal protein L11/L12 APH_RS04085 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APH_RS04105 SM00838 Elongation factor G C-terminus APH_RS04105 SM00889 Elongation factor G, domain IV APH_RS04120 SM00849 Metallo-beta-lactamase superfamily APH_RS04180 SM00881 CoA binding domain APH_RS04195 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APH_RS04205 SM01230 APH_RS04205 APH_RS04210 SM00849 Metallo-beta-lactamase superfamily APH_RS04250 SM00357 Cold shock protein domain APH_RS04250 SM00382 ATPases associated with a variety of cellular activities APH_RS04250 SM00959 Rho termination factor, N-terminal domain APH_RS04260 SM00382 ATPases associated with a variety of cellular activities APH_RS04260 SM01086 C-terminal, D2-small domain, of ClpB protein APH_RS04330 SM01209 APH_RS04330 APH_RS04330 SM01210 APH_RS04330 APH_RS04335 SM01323 APH_RS04335 APH_RS04355 SM00480 DNA polymerase III beta subunit APH_RS04360 SM00474 3'-5' exonuclease APH_RS04365 SM00448 cheY-homologous receiver domain APH_RS04365 SM00862 Transcriptional regulatory protein, C terminal APH_RS04370 SM00530 Helix-turn-helix XRE-family like proteins APH_RS04420 SM01400 APH_RS04420 APH_RS04580 SM00244 prohibitin homologues APH_RS04585 SM00244 prohibitin homologues APH_RS04590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APH_RS04595 SM00358 Double-stranded RNA binding motif APH_RS04595 SM00535 Ribonuclease III family APH_RS04655 SM00904 Riboflavin kinase APH_RS04670 SM00842 Cell division protein FtsA APH_RS04680 SM01329 APH_RS04680 APH_RS04730 SM00957 SecA DEAD-like domain APH_RS04730 SM00958 SecA preprotein cross-linking domain APH_RS04735 SM00382 ATPases associated with a variety of cellular activities APH_RS04755 SM00842 Cell division protein FtsA APH_RS04850 SM00798 AICARFT/IMPCHase bienzyme APH_RS04850 SM00851 MGS-like domain APH_RS04860 SM00935 Outer membrane protein (OmpH-like) APH_RS04870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APH_RS04885 SM00936 Penicillin-binding protein 5, C-terminal domain APH_RS04900 SM00562 APH_RS04900 APH_RS04905 SM00530 Helix-turn-helix XRE-family like proteins APH_RS04950 SM00382 ATPases associated with a variety of cellular activities APH_RS04950 SM00962 SRP54-type protein, GTPase domain APH_RS04950 SM00963 SRP54-type protein, helical bundle domain APH_RS05040 SM01230 APH_RS05040 APH_RS05085 SM01133 APH_RS05085 APH_RS05105 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APH_RS05175 SM01001 AIR carboxylase APH_RS05185 SM00411 bacterial (prokaryotic) histone like domain APH_RS05230 SM00864 Tubulin/FtsZ family, GTPase domain APH_RS05230 SM00865 Tubulin/FtsZ family, C-terminal domain APH_RS05255 SM00487 DEAD-like helicases superfamily APH_RS05255 SM00490 helicase superfamily c-terminal domain APH_RS05300 SM00861 Transketolase, pyrimidine binding domain APH_RS05345 SM00028 Tetratricopeptide repeats APH_RS05475 SM00859 Semialdehyde dehydrogenase, NAD binding domain APH_RS05485 SM00382 ATPases associated with a variety of cellular activities APH_RS05490 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APH_RS05510 SM00382 ATPases associated with a variety of cellular activities APH_RS05550 SM00487 DEAD-like helicases superfamily APH_RS05550 SM00490 helicase superfamily c-terminal domain APH_RS05565 SM00986 Uracil DNA glycosylase superfamily APH_RS05565 SM00987 UreE urease accessory protein, C-terminal domain APH_RS05575 SM00563 Phosphate acyltransferases APH_RS05755 SM00248 ankyrin repeats