APH_RS04985 afb088b299571b71654a86fde6f1921e 529 Pfam PF00117 Glutamine amidotransferase class-I 6 197 7.0E-36 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 529 1.1E-134 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 SUPERFAMILY SSF52317 3 198 1.24E-44 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS04985 afb088b299571b71654a86fde6f1921e 529 PANTHER PTHR11922 3 526 4.4E-237 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 4 199 2.8E-55 T 20-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 PANTHER PTHR11922:SF2 3 526 4.4E-237 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 Gene3D G3DSA:3.40.50.620 205 394 2.0E-52 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS04985 afb088b299571b71654a86fde6f1921e 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 529 46.662 T 20-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 Gene3D G3DSA:3.40.50.880 3 197 7.4E-49 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS04985 afb088b299571b71654a86fde6f1921e 529 SUPERFAMILY SSF52402 195 441 2.65E-48 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 SUPERFAMILY SSF54810 400 529 5.23E-44 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.2E-7 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.2E-7 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.2E-7 T 20-04-2016 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 Pfam PF00958 GMP synthase C terminal domain 430 528 1.6E-35 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APH_RS04985 afb088b299571b71654a86fde6f1921e 529 Gene3D G3DSA:3.30.300.10 396 529 3.0E-45 T 20-04-2016 APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 Pfam PF00625 Guanylate kinase 15 193 8.5E-44 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 SMART SM00072 11 195 4.2E-50 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 Gene3D G3DSA:3.40.50.300 25 57 5.6E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 13 192 2.2E-64 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 PANTHER PTHR23117 14 216 1.1E-69 T 20-04-2016 APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 Hamap MF_00328 Guanylate kinase [gmk]. 10 195 32.517 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 SUPERFAMILY SSF52540 12 198 6.0E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 Gene3D G3DSA:3.30.63.10 58 94 8.3E-24 T 20-04-2016 APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 Gene3D G3DSA:3.40.50.300 10 24 3.3E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 Gene3D G3DSA:3.40.50.300 95 201 3.3E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 PANTHER PTHR23117:SF13 14 216 1.1E-69 T 20-04-2016 APH_RS00760 9a55884d770d0dc1192904ac31a12209 216 ProSitePatterns PS00856 Guanylate kinase-like signature. 47 64 - T 20-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.0E-39 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.0E-39 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.0E-39 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 2.0E-39 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-39 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PANTHER PTHR22912:SF151 141 464 2.1E-178 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PANTHER PTHR22912:SF151 3 122 2.1E-178 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 Gene3D G3DSA:3.30.390.30 340 466 1.5E-40 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 5.5E-58 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 Gene3D G3DSA:3.50.50.60 149 339 1.4E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PIRSF PIRSF000350 1 449 6.2E-69 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 8.1E-32 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 SUPERFAMILY SSF51905 2 342 1.81E-55 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 SUPERFAMILY SSF55424 348 463 4.98E-35 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 467 2.6E-139 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PANTHER PTHR22912 141 464 2.1E-178 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PANTHER PTHR22912 3 122 2.1E-178 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.5E-70 T 20-04-2016 APH_RS01730 8782b8bacad3259a7ff16ed833002aaf 468 Gene3D G3DSA:3.50.50.60 5 148 4.4E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 SUPERFAMILY SSF46977 458 601 1.7E-48 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 PANTHER PTHR11632:SF51 6 596 0.0 T 20-04-2016 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 601 1.4E-244 T 20-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 SUPERFAMILY SSF56425 243 361 5.68E-43 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Gene3D G3DSA:1.20.58.100 441 546 4.2E-37 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 SUPERFAMILY SSF51905 5 266 6.85E-76 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 SUPERFAMILY SSF51905 365 435 6.85E-76 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Gene3D G3DSA:3.90.700.10 250 355 3.1E-44 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 20-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 PANTHER PTHR11632 6 596 0.0 T 20-04-2016 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 467 601 7.3E-44 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 PIRSF PIRSF000171 4 591 4.2E-39 T 20-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 601 8.8E-291 T 20-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Gene3D G3DSA:4.10.80.40 547 601 1.2E-28 T 20-04-2016 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Gene3D G3DSA:3.50.50.60 4 249 1.8E-121 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Gene3D G3DSA:3.50.50.60 357 430 1.8E-121 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00705 50b13b6cc787d8c826de49df9bafe0ec 601 Pfam PF00890 FAD binding domain 14 412 1.1E-121 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 143 8.4E-14 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.386 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50447 204 298 1.89E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 1.0E-16 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 1.6E-30 T 20-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 178 4.1E-55 T 20-04-2016 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PANTHER PTHR23115 5 391 8.7E-220 T 20-04-2016 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 209 296 1.5E-33 T 20-04-2016 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 301 392 1.1E-42 T 20-04-2016 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:3.40.50.300 4 208 2.9E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 PANTHER PTHR23115:SF112 5 391 8.7E-220 T 20-04-2016 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 5 393 1.3E-201 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50465 302 393 2.88E-34 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APH_RS01210 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF52540 5 225 3.16E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 143 8.4E-14 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.386 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50447 204 298 1.89E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 1.0E-16 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 8.1E-23 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 1.6E-30 T 20-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 178 4.1E-55 T 20-04-2016 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PANTHER PTHR23115 5 391 8.7E-220 T 20-04-2016 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 209 296 1.5E-33 T 20-04-2016 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 301 392 1.1E-42 T 20-04-2016 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:3.40.50.300 4 208 2.9E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 PANTHER PTHR23115:SF112 5 391 8.7E-220 T 20-04-2016 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 5 393 1.3E-201 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50465 302 393 2.88E-34 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APH_RS04100 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF52540 5 225 3.16E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Gene3D G3DSA:3.30.54.20 133 178 6.6E-9 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 631 6.4E-199 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PANTHER PTHR11451 1 637 6.4E-253 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 SUPERFAMILY SSF55186 68 242 1.23E-43 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Pfam PF03129 Anticodon binding domain 546 630 2.2E-11 T 20-04-2016 IPR004154 Anticodon-binding APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 531 3.0E-46 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 4.44E-53 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 4.44E-53 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 4.44E-53 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 4.44E-53 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 4.44E-53 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 PANTHER PTHR11451:SF31 1 637 6.4E-253 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 636 30.919 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Gene3D G3DSA:3.30.980.10 69 132 2.2E-25 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Gene3D G3DSA:3.30.980.10 189 222 2.2E-25 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 SUPERFAMILY SSF55681 244 528 2.49E-97 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Gene3D G3DSA:3.30.930.10 243 532 7.9E-121 T 20-04-2016 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 SMART SM00863 171 220 1.3E-10 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 186 219 5.9E-5 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 Gene3D G3DSA:3.40.50.800 533 634 3.9E-21 T 20-04-2016 IPR004154 Anticodon-binding APH_RS05105 3ea10860d2af1a4fb35dde736d0635cd 640 SUPERFAMILY SSF52954 531 634 2.11E-21 T 20-04-2016 IPR004154 Anticodon-binding APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 SMART SM00382 79 356 1.8E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 359 429 4.6E-6 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 SUPERFAMILY SSF52540 36 464 1.42E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Pfam PF07724 AAA domain (Cdc48 subfamily) 236 353 1.6E-34 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Gene3D G3DSA:1.10.8.10 141 196 1.8E-20 T 20-04-2016 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Gene3D G3DSA:1.10.8.10 238 268 1.8E-20 T 20-04-2016 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 34 467 3.3E-170 T 20-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 PANTHER PTHR11262 25 135 2.6E-190 T 20-04-2016 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 PANTHER PTHR11262 243 467 2.6E-190 T 20-04-2016 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 PANTHER PTHR11262:SF3 243 467 2.6E-190 T 20-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 PANTHER PTHR11262:SF3 25 135 2.6E-190 T 20-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 SMART SM01086 359 453 5.0E-23 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Gene3D G3DSA:3.40.50.300 270 355 1.3E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Gene3D G3DSA:3.40.50.300 35 140 1.3E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 83 151 1.6E-5 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS04260 824e6f1dd88f052553c06d45b5a53075 467 Gene3D G3DSA:1.10.8.60 358 467 2.7E-36 T 20-04-2016 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 698 6.2E-296 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF50249 628 703 5.89E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:2.40.50.140 627 702 1.4E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 2.5E-10 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF54211 305 495 1.27E-46 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 PANTHER PTHR11252:SF0 9 706 0.0 T 20-04-2016 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF55666 458 553 5.37E-25 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF55666 137 229 4.45E-23 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 247 327 3.8E-10 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF54791 563 647 2.57E-20 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF46915 242 334 3.4E-11 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF00013 KH domain 565 621 1.2E-10 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:3.30.1370.10 560 626 7.6E-22 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF54211 2 143 7.59E-45 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 700 28.615 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF01138 3' exoribonuclease family, domain 1 331 464 4.2E-22 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 1.2E-19 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SMART SM00316 628 697 4.8E-17 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 PANTHER PTHR11252 9 706 0.0 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:1.10.10.400 243 320 1.1E-13 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF00575 S1 RNA binding domain 626 697 7.6E-16 T 20-04-2016 IPR003029 S1 domain GO:0003676 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 SMART SM00322 560 625 1.3E-11 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:3.30.230.70 321 551 2.6E-81 T 20-04-2016 IPR027408 PNPase/RNase PH domain APH_RS03130 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:3.30.230.70 3 226 1.3E-72 T 20-04-2016 IPR027408 PNPase/RNase PH domain APH_RS02070 4b96084e50889548147c56a0aea68460 483 SMART SM00845 334 481 2.8E-72 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 PANTHER PTHR11659:SF0 10 483 5.6E-236 T 20-04-2016 APH_RS02070 4b96084e50889548147c56a0aea68460 483 PANTHER PTHR11659 10 483 5.6E-236 T 20-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 11 481 1.2E-165 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 SUPERFAMILY SSF89095 303 408 1.06E-29 T 20-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 SUPERFAMILY SSF55931 13 302 3.4E-114 T 20-04-2016 APH_RS02070 4b96084e50889548147c56a0aea68460 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 482 35.828 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 Pfam PF02637 GatB domain 335 481 1.5E-48 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 150 164 - T 20-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 APH_RS02070 4b96084e50889548147c56a0aea68460 483 Pfam PF02934 GatB/GatE catalytic domain 14 294 7.3E-107 T 20-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 Pfam PF16868 NMT1-like family 37 335 6.2E-77 T 20-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 Gene3D G3DSA:3.40.190.10 33 119 1.1E-39 T 20-04-2016 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 Gene3D G3DSA:3.40.190.10 262 336 1.1E-39 T 20-04-2016 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 PANTHER PTHR30024 29 337 3.3E-51 T 20-04-2016 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 Gene3D G3DSA:3.40.190.10 129 261 3.7E-35 T 20-04-2016 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 SUPERFAMILY SSF53850 33 337 1.09E-65 T 20-04-2016 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 PANTHER PTHR30024:SF13 29 337 3.3E-51 T 20-04-2016 APH_RS02615 a09cec45e6c336ef543d88f374bd2268 339 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 334 3.8E-74 T 20-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family APH_RS05315 6ac2dcf751b3c86dbf13e60dd964c19a 473 PIRSF PIRSF004919 13 472 6.7E-124 T 20-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APH_RS05315 6ac2dcf751b3c86dbf13e60dd964c19a 473 PANTHER PTHR30624:SF4 30 473 2.1E-186 T 20-04-2016 APH_RS05315 6ac2dcf751b3c86dbf13e60dd964c19a 473 PANTHER PTHR30624 30 473 2.1E-186 T 20-04-2016 APH_RS05315 6ac2dcf751b3c86dbf13e60dd964c19a 473 SUPERFAMILY SSF111283 30 471 2.22E-111 T 20-04-2016 APH_RS05315 6ac2dcf751b3c86dbf13e60dd964c19a 473 Pfam PF01523 Putative modulator of DNA gyrase 34 323 4.1E-49 T 20-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 275.071 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.40.50.300 3 194 1.4E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PANTHER PTHR23115:SF175 399 597 6.3E-297 T 20-04-2016 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:2.40.30.10 195 291 2.4E-21 T 20-04-2016 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 4.6E-18 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 1.2E-46 T 20-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PANTHER PTHR23115 2 375 6.3E-297 T 20-04-2016 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF54980 401 495 3.6E-23 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 9.2E-8 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF00679 Elongation factor G C-terminus 401 483 2.2E-19 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF54980 295 372 1.29E-17 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PANTHER PTHR23115 399 597 6.3E-297 T 20-04-2016 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 TIGRFAM TIGR01393 lepA: elongation factor 4 5 596 2.7E-275 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF50447 167 290 8.73E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 SMART SM00838 403 488 0.0014 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.30.70.240 403 490 1.8E-19 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF52540 2 207 2.17E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PANTHER PTHR23115:SF175 2 375 6.3E-297 T 20-04-2016 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 3.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.4E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF00009 Elongation factor Tu GTP binding domain 5 183 2.1E-50 T 20-04-2016 APH_RS03120 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.30.70.870 295 371 2.1E-24 T 20-04-2016 APH_RS04320 4121b931973345525e70cec128e3f157 293 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 292 2.8E-92 T 20-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APH_RS04320 4121b931973345525e70cec128e3f157 293 Pfam PF01040 UbiA prenyltransferase family 29 274 5.1E-52 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APH_RS04320 4121b931973345525e70cec128e3f157 293 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 66 88 - T 20-04-2016 IPR030470 UbiA prenyltransferase conserved site APH_RS04320 4121b931973345525e70cec128e3f157 293 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 293 18.11 T 20-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APH_RS04320 4121b931973345525e70cec128e3f157 293 PANTHER PTHR11048 14 291 1.5E-67 T 20-04-2016 APH_RS04165 edd3a4b4cc65564417a2a762fcbbf3f3 339 PANTHER PTHR30570 1 339 5.3E-27 T 20-04-2016 APH_RS04165 edd3a4b4cc65564417a2a762fcbbf3f3 339 Pfam PF12849 PBP superfamily domain 22 303 1.3E-32 T 20-04-2016 IPR024370 PBP domain APH_RS04165 edd3a4b4cc65564417a2a762fcbbf3f3 339 SUPERFAMILY SSF53850 19 336 4.52E-58 T 20-04-2016 APH_RS04165 edd3a4b4cc65564417a2a762fcbbf3f3 339 Gene3D G3DSA:3.40.190.10 23 178 5.2E-24 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 202 3.2E-33 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 8.9E-91 T 20-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PANTHER PTHR10046:SF43 9 780 0.0 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Hamap MF_01973 Lon protease [lon]. 9 776 64.403 T 20-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:3.30.230.10 593 775 8.7E-72 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PIRSF PIRSF001174 1 778 0.0 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:3.40.50.300 322 503 5.9E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03820 04d866ad0792e22548222c6dad96883b 802 SMART SM00464 8 203 6.4E-52 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 2.4E-51 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 2.4E-51 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 2.4E-51 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 2.4E-51 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 2.4E-51 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 20-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 PANTHER PTHR10046 9 780 0.0 T 20-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 SUPERFAMILY SSF54211 599 774 5.69E-56 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:1.10.8.60 504 588 8.5E-28 T 20-04-2016 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 SUPERFAMILY SSF52540 317 580 2.0E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03820 04d866ad0792e22548222c6dad96883b 802 TIGRFAM TIGR00763 lon: endopeptidase La 10 774 1.3E-271 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 3.2E-20 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS03820 04d866ad0792e22548222c6dad96883b 802 SUPERFAMILY SSF88697 9 201 2.73E-39 T 20-04-2016 IPR015947 PUA-like domain APH_RS03820 04d866ad0792e22548222c6dad96883b 802 SMART SM00382 352 498 7.3E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 180 201 1.5E-8 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 161 179 1.5E-8 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 78 99 1.5E-8 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 30 52 1.5E-8 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 SUPERFAMILY SSF117892 56 192 2.09E-24 T 20-04-2016 IPR001107 Band 7 domain APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 SMART SM00244 23 185 6.2E-31 T 20-04-2016 IPR001107 Band 7 domain APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PANTHER PTHR10264 4 290 4.6E-71 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 Pfam PF01145 SPFH domain / Band 7 family 27 202 1.5E-29 T 20-04-2016 IPR001107 Band 7 domain APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PANTHER PTHR10264:SF80 4 290 4.6E-71 T 20-04-2016 APH_RS04585 d774824b5af4c21d4efe9e032748cbca 291 PIRSF PIRSF005651 2 290 1.2E-80 T 20-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 PANTHER PTHR30314:SF3 1 400 7.4E-180 T 20-04-2016 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 345 36.525 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 Gene3D G3DSA:3.40.50.1440 16 217 5.3E-94 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 101 121 9.3E-51 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 215 236 9.3E-51 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 129 150 9.3E-51 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 192 214 9.3E-51 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 SUPERFAMILY SSF55307 207 322 1.26E-42 T 20-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 SMART SM00864 16 208 2.0E-107 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.1E-38 T 20-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 PANTHER PTHR30314 1 400 7.4E-180 T 20-04-2016 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 SUPERFAMILY SSF52490 15 211 3.14E-69 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 SMART SM00865 210 328 1.5E-57 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 329 6.5E-121 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 1.6E-42 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 Gene3D G3DSA:3.30.1330.20 218 323 1.5E-49 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APH_RS05230 b588c1902af56d5e4b5a6df3e392459a 400 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 Pfam PF00677 Lumazine binding domain 4 88 4.2E-15 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 Pfam PF00677 Lumazine binding domain 102 186 4.0E-20 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 Gene3D G3DSA:2.40.30.20 107 201 2.0E-28 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 Gene3D G3DSA:2.40.30.20 5 106 2.6E-25 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 3.3E-56 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 SUPERFAMILY SSF63380 96 198 3.57E-31 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 PANTHER PTHR21098 1 197 7.7E-65 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 PIRSF PIRSF000498 1 202 1.3E-63 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS00500 c0015e7c5bf36796c914c12c0bcbfa1c 203 SUPERFAMILY SSF63380 1 91 3.57E-21 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 PANTHER PTHR11986 8 420 1.3E-142 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 Pfam PF00202 Aminotransferase class-III 27 416 2.9E-107 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 Gene3D G3DSA:3.40.640.10 62 321 6.3E-79 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 Gene3D G3DSA:3.90.1150.10 326 420 1.3E-37 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 Gene3D G3DSA:3.90.1150.10 8 61 1.3E-37 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 SUPERFAMILY SSF53383 14 417 1.19E-109 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 PIRSF PIRSF000521 27 421 3.5E-29 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 417 1.3E-136 T 20-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_RS02120 649db6fb2d306120c1638637445ebb6f 423 PANTHER PTHR11986:SF8 8 420 1.3E-142 T 20-04-2016 APH_RS03125 d0bb165fe383f972eeb5b3e700cf4027 261 PANTHER PTHR13090 82 258 3.7E-28 T 20-04-2016 APH_RS03125 d0bb165fe383f972eeb5b3e700cf4027 261 SUPERFAMILY SSF53335 64 210 3.22E-14 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS03125 d0bb165fe383f972eeb5b3e700cf4027 261 PANTHER PTHR13090:SF1 82 258 3.7E-28 T 20-04-2016 APH_RS03125 d0bb165fe383f972eeb5b3e700cf4027 261 Pfam PF08241 Methyltransferase domain 88 135 1.4E-6 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APH_RS03125 d0bb165fe383f972eeb5b3e700cf4027 261 Gene3D G3DSA:3.40.50.150 89 260 5.5E-17 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 PANTHER PTHR11758 2 133 5.1E-39 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Pfam PF00410 Ribosomal protein S8 5 133 4.4E-42 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 SUPERFAMILY SSF56047 3 133 1.44E-39 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Gene3D G3DSA:3.30.1490.10 77 133 1.8E-23 T 20-04-2016 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Gene3D G3DSA:3.30.1370.30 3 71 3.0E-20 T 20-04-2016 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 PANTHER PTHR11758:SF4 2 133 5.1E-39 T 20-04-2016 APH_RS01290 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 133 28.51 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APH_RS03935 d8a078dfc69f6224df5596be7f76e798 220 SUPERFAMILY SSF52540 11 194 6.02E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03935 d8a078dfc69f6224df5596be7f76e798 220 PANTHER PTHR30050 76 215 7.9E-14 T 20-04-2016 APH_RS03935 d8a078dfc69f6224df5596be7f76e798 220 Gene3D G3DSA:1.10.8.60 151 215 2.1E-9 T 20-04-2016 APH_RS03935 d8a078dfc69f6224df5596be7f76e798 220 Pfam PF00308 Bacterial dnaA protein 83 190 4.1E-6 T 20-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APH_RS03935 d8a078dfc69f6224df5596be7f76e798 220 Gene3D G3DSA:3.40.50.300 14 143 1.3E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03935 d8a078dfc69f6224df5596be7f76e798 220 PANTHER PTHR30050:SF5 76 215 7.9E-14 T 20-04-2016 APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 293 22.272 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 PANTHER PTHR11088 1 278 4.0E-49 T 20-04-2016 APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 Gene3D G3DSA:1.10.287.890 196 277 1.6E-25 T 20-04-2016 APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 SUPERFAMILY SSF52540 5 148 1.29E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 279 9.0E-56 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 PANTHER PTHR11088:SF25 1 278 4.0E-49 T 20-04-2016 APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 Gene3D G3DSA:3.40.50.300 2 168 5.2E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01900 9016309d71d04f461e3d34a08b0ab425 312 Pfam PF01715 IPP transferase 38 277 2.3E-53 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APH_RS01425 b9120199b1a5a1b2516ec351f1020c1a 110 Gene3D G3DSA:3.40.50.970 2 110 5.5E-48 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01425 b9120199b1a5a1b2516ec351f1020c1a 110 SUPERFAMILY SSF52518 2 110 4.28E-45 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01425 b9120199b1a5a1b2516ec351f1020c1a 110 Pfam PF02779 Transketolase, pyrimidine binding domain 2 110 2.3E-28 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS01425 b9120199b1a5a1b2516ec351f1020c1a 110 SMART SM00861 1 110 1.7E-9 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS01425 b9120199b1a5a1b2516ec351f1020c1a 110 PANTHER PTHR11624 1 110 1.6E-65 T 20-04-2016 IPR033247 Transketolase family APH_RS01425 b9120199b1a5a1b2516ec351f1020c1a 110 PANTHER PTHR11624:SF1 1 110 1.6E-65 T 20-04-2016 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 513 1021 1.0E-184 T 20-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 SUPERFAMILY SSF51730 179 520 1.06E-100 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 824 835 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 64 175 1.6E-40 T 20-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 PIRSF PIRSF000197 3 1039 0.0 T 20-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 SUPERFAMILY SSF81935 9 177 5.49E-59 T 20-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 SUPERFAMILY SSF53720 528 1028 1.96E-131 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Gene3D G3DSA:1.10.2060.10 61 176 9.4E-44 T 20-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Gene3D G3DSA:3.20.20.220 181 519 7.3E-89 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Gene3D G3DSA:3.40.605.10 553 811 2.3E-74 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Pfam PF00171 Aldehyde dehydrogenase family 566 1025 2.0E-118 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Gene3D G3DSA:3.40.309.10 812 1000 4.5E-45 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 PANTHER PTHR11699:SF18 530 1028 2.3E-172 T 20-04-2016 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Gene3D G3DSA:1.20.5.550 10 56 6.7E-4 T 20-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 PANTHER PTHR11699 530 1028 2.3E-172 T 20-04-2016 APH_RS02790 5d215a599d84e64c93db4b73f682bb8e 1044 Pfam PF01619 Proline dehydrogenase 191 477 5.4E-80 T 20-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 Gene3D G3DSA:2.40.280.10 3 123 2.0E-44 T 20-04-2016 IPR023620 Small protein B APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 SUPERFAMILY SSF74982 2 128 2.09E-44 T 20-04-2016 IPR023620 Small protein B APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 62.577 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 PANTHER PTHR30308 1 148 1.5E-62 T 20-04-2016 APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 PANTHER PTHR30308:SF2 1 148 1.5E-62 T 20-04-2016 APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 Pfam PF01668 SmpB protein 3 65 2.6E-25 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 ProSitePatterns PS01317 SsrA-binding protein. 22 34 - T 20-04-2016 IPR020081 SsrA-binding protein, conserved site APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 128 1.0E-44 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APH_RS05410 0d3768702f1cd5945dee77587ff7668f 149 TIGRFAM TIGR00086 smpB: SsrA-binding protein 4 146 7.7E-54 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APH_RS01440 896d9908a799cc2829b87673869838a8 280 PANTHER PTHR12001 6 280 2.0E-61 T 20-04-2016 IPR017446 Polyprenyl synthetase-related APH_RS01440 896d9908a799cc2829b87673869838a8 280 SUPERFAMILY SSF48576 8 235 1.15E-60 T 20-04-2016 IPR008949 Isoprenoid synthase domain APH_RS01440 896d9908a799cc2829b87673869838a8 280 Pfam PF00348 Polyprenyl synthetase 39 232 2.8E-42 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APH_RS01440 896d9908a799cc2829b87673869838a8 280 Gene3D G3DSA:1.10.600.10 3 232 1.2E-67 T 20-04-2016 IPR008949 Isoprenoid synthase domain APH_RS01440 896d9908a799cc2829b87673869838a8 280 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 86 102 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APH_RS01440 896d9908a799cc2829b87673869838a8 280 PANTHER PTHR12001:SF23 6 280 2.0E-61 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 SUPERFAMILY SSF64484 15 935 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 SUPERFAMILY SSF64484 1122 1354 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1369 9.92 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 754 9.1E-17 T 20-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.50.100 1078 1111 5.2E-4 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.50.100 1146 1201 1.1E-4 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 410 486 4.7E-26 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 395 3.7E-8 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 SMART SM00663 235 515 2.4E-160 T 20-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 757 1306 9.8E-69 T 20-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376:SF32 1294 1355 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376:SF32 1167 1253 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376:SF32 977 1146 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376:SF32 3 959 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 644 1.7E-24 T 20-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 14 343 4.8E-74 T 20-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 18 1011 0.0 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.40.20 350 377 3.2E-37 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.40.20 418 490 3.2E-37 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376 1294 1355 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376 1167 1253 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376 977 1146 0.0 T 20-04-2016 APH_RS04055 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 PANTHER PTHR19376 3 959 0.0 T 20-04-2016 APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 PANTHER PTHR23152 12 904 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 Gene3D G3DSA:3.40.50.970 135 507 4.0E-70 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 Pfam PF00676 Dehydrogenase E1 component 186 496 3.3E-55 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 SUPERFAMILY SSF52518 116 510 3.91E-80 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 SUPERFAMILY SSF52518 562 765 1.25E-50 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 PIRSF PIRSF000157 2 905 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 Gene3D G3DSA:3.40.50.970 571 762 2.5E-24 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 903 1.3E-304 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 Pfam PF02779 Transketolase, pyrimidine binding domain 565 759 2.7E-67 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 SMART SM00861 566 759 4.1E-65 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS03445 54abc0b7d7b1740b8f97713e28eeb482 905 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 770 904 1.4E-43 T 20-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 SUPERFAMILY SSF50129 3 145 1.56E-28 T 20-04-2016 IPR011032 GroES-like APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 SUPERFAMILY SSF51735 114 262 4.38E-35 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 PANTHER PTHR11695 16 325 4.2E-84 T 20-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 Gene3D G3DSA:3.40.50.720 147 254 1.1E-20 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 PANTHER PTHR11695:SF605 16 325 4.2E-84 T 20-04-2016 APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 Pfam PF00107 Zinc-binding dehydrogenase 152 252 6.6E-15 T 20-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 SMART SM00829 11 323 4.6E-11 T 20-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 Gene3D G3DSA:3.90.180.10 2 146 2.5E-32 T 20-04-2016 IPR011032 GroES-like APH_RS01110 f881730f28bd7e45cbc9e84c96656cbc 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 2.8E-8 T 20-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APH_RS01300 265102eb1de382fc4cded2587db2b53e 121 PANTHER PTHR12899 3 121 2.0E-16 T 20-04-2016 APH_RS01300 265102eb1de382fc4cded2587db2b53e 121 Gene3D G3DSA:3.30.420.100 25 121 1.5E-25 T 20-04-2016 APH_RS01300 265102eb1de382fc4cded2587db2b53e 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 121 9.9E-29 T 20-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01300 265102eb1de382fc4cded2587db2b53e 121 SUPERFAMILY SSF53137 8 118 1.07E-34 T 20-04-2016 APH_RS01300 265102eb1de382fc4cded2587db2b53e 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 22.356 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01300 265102eb1de382fc4cded2587db2b53e 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 121 5.5E-26 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PANTHER PTHR10724:SF6 29 555 4.9E-144 T 20-04-2016 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SUPERFAMILY SSF50249 221 315 1.57E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SUPERFAMILY SSF50249 293 409 1.29E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Gene3D G3DSA:2.40.50.140 309 395 3.4E-26 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Gene3D G3DSA:2.40.50.140 396 484 3.1E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SUPERFAMILY SSF50249 49 144 1.14E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SUPERFAMILY SSF50249 140 215 3.13E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Gene3D G3DSA:2.40.50.140 53 131 1.0E-7 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Gene3D G3DSA:2.40.50.140 132 205 1.1E-10 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SMART SM00316 400 477 4.6E-8 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SMART SM00316 135 203 1.4E-4 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SMART SM00316 222 298 1.9E-23 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SMART SM00316 492 559 2.7 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SMART SM00316 51 119 4.4E-5 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SMART SM00316 313 385 1.3E-21 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PANTHER PTHR10724 29 555 4.9E-144 T 20-04-2016 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 SUPERFAMILY SSF50249 385 482 5.59E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Gene3D G3DSA:2.40.50.140 207 302 1.4E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 53 71 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 140 156 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 250 271 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 368 386 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 71 85 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 116 135 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 158 175 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 PRINTS PR00681 Ribosomal protein S1 signature 328 347 7.41E-56 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Pfam PF00575 S1 RNA binding domain 398 477 9.0E-7 T 20-04-2016 IPR003029 S1 domain GO:0003676 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Pfam PF00575 S1 RNA binding domain 50 118 7.1E-6 T 20-04-2016 IPR003029 S1 domain GO:0003676 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Pfam PF00575 S1 RNA binding domain 221 298 9.9E-17 T 20-04-2016 IPR003029 S1 domain GO:0003676 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Pfam PF00575 S1 RNA binding domain 313 385 8.9E-18 T 20-04-2016 IPR003029 S1 domain GO:0003676 APH_RS01185 6ea710521767358158d9658d92d9df8c 559 Pfam PF00575 S1 RNA binding domain 140 203 9.6E-8 T 20-04-2016 IPR003029 S1 domain GO:0003676 APH_RS05065 2d7b4007136cc616b194ac876a671a6d 236 Pfam PF01617 Surface antigen 149 230 3.2E-19 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05065 2d7b4007136cc616b194ac876a671a6d 236 Gene3D G3DSA:2.40.160.20 185 222 2.7E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02205 7480d6e64789422047cc938a43187a5f 273 SUPERFAMILY SSF56219 2 272 1.31E-76 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APH_RS02205 7480d6e64789422047cc938a43187a5f 273 Gene3D G3DSA:3.60.10.10 1 272 4.4E-76 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APH_RS02205 7480d6e64789422047cc938a43187a5f 273 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 268 1.1E-71 T 20-04-2016 APH_RS02205 7480d6e64789422047cc938a43187a5f 273 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 270 5.2E-68 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APH_RS02205 7480d6e64789422047cc938a43187a5f 273 PANTHER PTHR22748 1 273 2.8E-86 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APH_RS02205 7480d6e64789422047cc938a43187a5f 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 264 3.1E-23 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APH_RS02205 7480d6e64789422047cc938a43187a5f 273 PANTHER PTHR22748:SF7 1 273 2.8E-86 T 20-04-2016 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 PIRSF PIRSF005902 1 256 4.0E-70 T 20-04-2016 IPR001130 TatD family GO:0016788 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 PANTHER PTHR10060 2 256 2.3E-100 T 20-04-2016 IPR001130 TatD family GO:0016788 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 Pfam PF01026 TatD related DNase 3 252 3.9E-68 T 20-04-2016 IPR001130 TatD family GO:0016788 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 Gene3D G3DSA:3.20.20.140 2 253 5.0E-75 T 20-04-2016 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 6.7E-79 T 20-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 PANTHER PTHR10060:SF20 2 256 2.3E-100 T 20-04-2016 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 20-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APH_RS02280 4f426e7061bb0b975a9be3ea3f4ee3e6 270 SUPERFAMILY SSF51556 2 253 1.59E-76 T 20-04-2016 IPR032466 Metal-dependent hydrolase APH_RS00910 ff18dff85f3fdd3d660457650a4160e3 424 Pfam PF01435 Peptidase family M48 34 216 3.3E-28 T 20-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APH_RS00910 ff18dff85f3fdd3d660457650a4160e3 424 Gene3D G3DSA:1.25.40.10 267 406 2.3E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS00910 ff18dff85f3fdd3d660457650a4160e3 424 PANTHER PTHR22726 23 312 7.8E-33 T 20-04-2016 APH_RS00910 ff18dff85f3fdd3d660457650a4160e3 424 PANTHER PTHR22726:SF10 23 312 7.8E-33 T 20-04-2016 APH_RS00910 ff18dff85f3fdd3d660457650a4160e3 424 SUPERFAMILY SSF48452 262 389 5.48E-15 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS00910 ff18dff85f3fdd3d660457650a4160e3 424 Gene3D G3DSA:3.30.2010.10 27 106 1.5E-16 T 20-04-2016 APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 Gene3D G3DSA:2.40.50.140 5 159 2.2E-42 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 Hamap MF_00984 Single-stranded DNA-binding protein. 6 119 30.595 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 Pfam PF00436 Single-strand binding protein family 6 106 4.4E-33 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 SUPERFAMILY SSF50249 5 159 6.17E-43 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 PANTHER PTHR10302:SF0 2 106 3.2E-39 T 20-04-2016 APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 115 4.9E-39 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APH_RS02055 9e5c97ace3528b369c253563f6c306b0 159 PANTHER PTHR10302 2 106 3.2E-39 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.40.50.720 417 578 5.8E-12 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:1.10.1060.10 214 330 7.6E-6 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:2.40.30.10 800 896 3.5E-16 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF51971 360 394 7.65E-20 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF51971 435 561 7.65E-20 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF51971 630 705 7.65E-20 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 540 558 3.3E-8 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 381 3.3E-8 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 486 504 3.3E-8 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF52343 894 1076 1.44E-15 T 20-04-2016 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 360 755 1.9E-13 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF63380 799 898 2.65E-14 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.50.50.60 580 725 1.9E-11 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.50.50.60 354 393 1.9E-11 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS02345 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.40.50.80 900 1020 9.4E-12 T 20-04-2016 APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 SUPERFAMILY SSF56420 4 81 2.88E-29 T 20-04-2016 IPR023635 Peptide deformylase APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 Pfam PF01327 Polypeptide deformylase 4 72 4.5E-26 T 20-04-2016 IPR023635 Peptide deformylase APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 PANTHER PTHR10458 3 83 3.5E-29 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 Gene3D G3DSA:3.90.45.10 5 84 2.6E-30 T 20-04-2016 IPR023635 Peptide deformylase APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 PRINTS PR01576 Peptide deformylase signature 9 20 1.9E-18 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 PRINTS PR01576 Peptide deformylase signature 40 69 1.9E-18 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05585 fcf15495eca014dd63344c5bd8353179 88 PRINTS PR01576 Peptide deformylase signature 21 39 1.9E-18 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05720 7cc3ae38876196bd55056f10d72ff63c 434 Pfam PF03743 Bacterial conjugation TrbI-like protein 230 428 7.1E-47 T 20-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI APH_RS00535 8cc5400ea4ee22e7a0d2ef9c9144cbd6 235 PANTHER PTHR13773 52 234 6.0E-43 T 20-04-2016 APH_RS00535 8cc5400ea4ee22e7a0d2ef9c9144cbd6 235 Pfam PF01148 Cytidylyltransferase family 62 229 4.3E-46 T 20-04-2016 APH_RS00535 8cc5400ea4ee22e7a0d2ef9c9144cbd6 235 PANTHER PTHR13773:SF0 52 234 6.0E-43 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:1.10.287.610 2 55 1.1E-12 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:2.40.50.140 312 383 1.2E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Hamap MF_01588 DNA ligase [ligA]. 4 670 43.355 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 670 1.8E-12 T 20-04-2016 IPR001357 BRCT domain APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF56091 4 309 8.8E-95 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 PANTHER PTHR23389 1 531 8.4E-145 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 666 4.1E-202 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 PIRSF PIRSF001604 1 675 4.6E-217 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF12826 Helix-hairpin-helix motif 510 576 2.9E-8 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 120 149 - T 20-04-2016 IPR018239 NAD-dependent DNA ligase, active site APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:3.40.50.10190 596 672 8.9E-24 T 20-04-2016 IPR001357 BRCT domain APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:3.30.470.30 125 244 3.9E-37 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 402 429 1.6E-9 T 20-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF52113 597 671 7.29E-18 T 20-04-2016 IPR001357 BRCT domain APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF50249 312 392 5.14E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 SMART SM00532 5 443 1.3E-187 T 20-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 310 2.0E-93 T 20-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:1.10.150.20 505 582 2.1E-14 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 PANTHER PTHR23389:SF9 1 531 8.4E-145 T 20-04-2016 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF47781 398 582 2.27E-42 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 315 390 1.1E-33 T 20-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 SMART SM00292 596 673 1.4E-11 T 20-04-2016 IPR001357 BRCT domain APH_RS00620 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:1.10.150.20 430 502 2.5E-19 T 20-04-2016 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 Gene3D G3DSA:3.20.20.70 202 324 8.9E-6 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 PANTHER PTHR32332 80 321 1.4E-18 T 20-04-2016 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 SUPERFAMILY SSF51412 99 324 7.78E-7 T 20-04-2016 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 PANTHER PTHR32332:SF18 17 51 1.4E-18 T 20-04-2016 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 PANTHER PTHR32332:SF18 80 321 1.4E-18 T 20-04-2016 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 Pfam PF03060 Nitronate monooxygenase 131 346 5.3E-8 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APH_RS00480 8daa5c9639093289e190e9e1ccd79b6b 467 PANTHER PTHR32332 17 51 1.4E-18 T 20-04-2016 APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 Gene3D G3DSA:3.30.428.10 6 114 4.2E-33 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 20-04-2016 IPR019808 Histidine triad, conserved site APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 SUPERFAMILY SSF54197 6 113 3.97E-30 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 Pfam PF01230 HIT domain 17 111 7.5E-25 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 11 27 4.3E-19 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 99 109 4.3E-19 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 32 50 4.3E-19 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APH_RS03435 22c9eb3d5aa9c11034293f3aa3b3652c 124 PANTHER PTHR23089 4 110 5.9E-33 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APH_RS05415 d94a18b02fa560e695184d13dd289097 209 PANTHER PTHR21327 1 208 1.1E-83 T 20-04-2016 APH_RS05415 d94a18b02fa560e695184d13dd289097 209 PANTHER PTHR21327:SF6 1 208 1.1E-83 T 20-04-2016 APH_RS05415 d94a18b02fa560e695184d13dd289097 209 SUPERFAMILY SSF55821 8 206 9.39E-74 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APH_RS05415 d94a18b02fa560e695184d13dd289097 209 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 205 1.5E-61 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS05415 d94a18b02fa560e695184d13dd289097 209 Gene3D G3DSA:3.90.870.10 8 207 9.7E-79 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APH_RS05415 d94a18b02fa560e695184d13dd289097 209 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 14 205 1.6E-69 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 300 314 2.7E-8 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 221 236 2.7E-8 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 352 364 2.7E-8 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 328 341 2.7E-8 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 300 315 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 Gene3D G3DSA:3.30.230.10 5 167 4.0E-27 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 9.0E-38 T 20-04-2016 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PANTHER PTHR32039:SF7 1 182 1.1E-195 T 20-04-2016 IPR004482 Mg chelatase-related protein APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PANTHER PTHR32039:SF7 202 508 1.1E-195 T 20-04-2016 IPR004482 Mg chelatase-related protein APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 414 508 3.6E-22 T 20-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 SUPERFAMILY SSF52540 201 514 7.78E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 Pfam PF01078 Magnesium chelatase, subunit ChlI 202 402 3.5E-88 T 20-04-2016 IPR000523 Magnesium chelatase ChlI domain APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 508 8.4E-157 T 20-04-2016 IPR004482 Mg chelatase-related protein APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 SMART SM00382 222 403 4.2E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PANTHER PTHR32039 1 182 1.1E-195 T 20-04-2016 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 PANTHER PTHR32039 202 508 1.1E-195 T 20-04-2016 APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 SUPERFAMILY SSF54211 8 167 6.45E-29 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS03095 e88c07ecd4a2e619da6ea56625d03bad 517 Gene3D G3DSA:3.40.50.300 202 398 1.8E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 48 164 9.0E-37 T 20-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 PANTHER PTHR41535 6 165 1.4E-17 T 20-04-2016 APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 SUPERFAMILY SSF50630 50 154 6.16E-20 T 20-04-2016 IPR021109 Aspartic peptidase domain APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 70 81 - T 20-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 Pfam PF13975 gag-polyprotein putative aspartyl protease 61 150 1.4E-23 T 20-04-2016 APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 Gene3D G3DSA:2.40.70.10 58 116 2.2E-4 T 20-04-2016 IPR021109 Aspartic peptidase domain APH_RS01550 74b8d4c0e6b919a72d1d52a1a9684095 165 PANTHER PTHR41535:SF1 6 165 1.4E-17 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:3.30.420.10 430 466 3.8E-4 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:3.30.420.10 308 420 1.4E-9 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SUPERFAMILY SSF88723 3 167 1.01E-49 T 20-04-2016 IPR029060 PIN domain-like APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SUPERFAMILY SSF53098 308 420 2.58E-9 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 668 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 618 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 726 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 785 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 703 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 625 648 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 580 602 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 737 748 2.7E-63 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:3.30.70.370 589 636 4.3E-59 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:3.30.70.370 742 847 4.3E-59 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 TIGRFAM TIGR00593 pola: DNA polymerase I 7 847 3.8E-262 T 20-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:1.10.150.20 166 240 2.5E-27 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SMART SM00482 611 812 1.5E-93 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 261 3.0E-26 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Pfam PF00476 DNA polymerase family A 474 846 2.4E-136 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SUPERFAMILY SSF56672 449 847 1.02E-136 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:3.40.50.1010 2 165 1.2E-54 T 20-04-2016 IPR029060 PIN domain-like APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 ProSitePatterns PS00447 DNA polymerase family A signature. 678 697 - T 20-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SUPERFAMILY SSF47807 169 282 2.69E-27 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SMART SM00475 3 259 1.5E-105 T 20-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:1.20.1060.10 467 588 7.3E-32 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PANTHER PTHR10133:SF27 1 852 2.7E-287 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 3.0E-46 T 20-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 Gene3D G3DSA:1.10.150.20 637 741 1.1E-28 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 PANTHER PTHR10133 1 852 2.7E-287 T 20-04-2016 APH_RS00005 338347254c19abdfe0fea42732d0a5e3 852 SMART SM00279 170 205 8.3E-12 T 20-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APH_RS00555 f9c22399430ce29a491e565b09946998 420 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 414 30.014 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APH_RS00555 f9c22399430ce29a491e565b09946998 420 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 404 1.4E-131 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APH_RS00555 f9c22399430ce29a491e565b09946998 420 PANTHER PTHR11476:SF9 6 420 6.7E-159 T 20-04-2016 APH_RS00555 f9c22399430ce29a491e565b09946998 420 PIRSF PIRSF001549 4 416 1.8E-108 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APH_RS00555 f9c22399430ce29a491e565b09946998 420 Pfam PF03129 Anticodon binding domain 325 414 4.6E-9 T 20-04-2016 IPR004154 Anticodon-binding APH_RS00555 f9c22399430ce29a491e565b09946998 420 Pfam PF13393 Histidyl-tRNA synthetase 11 311 1.5E-43 T 20-04-2016 APH_RS00555 f9c22399430ce29a491e565b09946998 420 Gene3D G3DSA:3.30.930.10 7 184 2.4E-82 T 20-04-2016 APH_RS00555 f9c22399430ce29a491e565b09946998 420 Gene3D G3DSA:3.30.930.10 220 316 2.4E-82 T 20-04-2016 APH_RS00555 f9c22399430ce29a491e565b09946998 420 SUPERFAMILY SSF55681 6 315 1.49E-88 T 20-04-2016 APH_RS00555 f9c22399430ce29a491e565b09946998 420 Gene3D G3DSA:3.40.50.800 323 414 6.0E-19 T 20-04-2016 IPR004154 Anticodon-binding APH_RS00555 f9c22399430ce29a491e565b09946998 420 SUPERFAMILY SSF52954 325 415 6.38E-18 T 20-04-2016 IPR004154 Anticodon-binding APH_RS00555 f9c22399430ce29a491e565b09946998 420 PANTHER PTHR11476 6 420 6.7E-159 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APH_RS01395 ca0478b927283877210d470115cbc219 320 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 187 1.3E-29 T 20-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APH_RS01395 ca0478b927283877210d470115cbc219 320 SUPERFAMILY SSF53901 7 319 6.71E-61 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS01395 ca0478b927283877210d470115cbc219 320 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 320 65.481 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APH_RS01395 ca0478b927283877210d470115cbc219 320 PANTHER PTHR34069 1 320 1.1E-111 T 20-04-2016 APH_RS01395 ca0478b927283877210d470115cbc219 320 PANTHER PTHR34069:SF2 1 320 1.1E-111 T 20-04-2016 APH_RS01395 ca0478b927283877210d470115cbc219 320 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 319 7.3E-33 T 20-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APH_RS01395 ca0478b927283877210d470115cbc219 320 Gene3D G3DSA:3.40.47.10 161 319 1.3E-43 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS01395 ca0478b927283877210d470115cbc219 320 Gene3D G3DSA:3.40.47.10 3 160 7.8E-63 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS01395 ca0478b927283877210d470115cbc219 320 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 319 7.1E-117 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 SUPERFAMILY SSF54768 14 81 5.02E-21 T 20-04-2016 APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 79 2.8E-25 T 20-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 Gene3D G3DSA:3.30.160.20 14 78 6.5E-26 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 PANTHER PTHR13718 23 167 4.9E-53 T 20-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 Gene3D G3DSA:3.30.230.10 82 165 1.8E-27 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 1.5E-23 T 20-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 169 30.936 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 SUPERFAMILY SSF54211 85 165 3.54E-22 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS01305 22ebada9f1dd5389ea46561fab69bfb7 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 167 3.6E-57 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 Gene3D G3DSA:1.10.8.60 317 390 7.3E-28 T 20-04-2016 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 174 304 4.9E-44 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 Pfam PF01434 Peptidase family M41 366 566 5.6E-72 T 20-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 ProSitePatterns PS00674 AAA-protein family signature. 276 294 - T 20-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 SUPERFAMILY SSF140990 387 572 4.05E-67 T 20-04-2016 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 PANTHER PTHR23076 1 570 2.0E-300 T 20-04-2016 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 SUPERFAMILY SSF52540 130 376 1.55E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04735 2ddba125d414c31646075936ff3737e4 590 Gene3D G3DSA:3.40.50.300 133 316 9.4E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04735 2ddba125d414c31646075936ff3737e4 590 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 88 567 1.1E-222 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 581 35.849 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APH_RS04735 2ddba125d414c31646075936ff3737e4 590 SMART SM00382 169 308 4.4E-21 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Gene3D G3DSA:1.10.275.10 3 92 1.9E-23 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 SUPERFAMILY SSF48557 4 429 3.3E-118 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Pfam PF00206 Lyase 12 285 8.9E-46 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 SMART SM00998 351 429 6.7E-27 T 20-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 130 150 1.6E-6 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 89 111 1.6E-6 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 263 279 1.6E-6 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 218 242 1.6E-6 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 429 1.9E-143 T 20-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 9.9E-25 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 218 245 9.9E-25 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 90 108 9.9E-25 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 263 279 9.9E-25 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Gene3D G3DSA:1.10.40.30 359 429 2.8E-25 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PANTHER PTHR11444:SF2 4 424 2.3E-131 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 ProSitePatterns PS00163 Fumarate lyases signature. 263 272 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PANTHER PTHR11444 4 424 2.3E-131 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Gene3D G3DSA:1.20.200.10 93 358 6.9E-79 T 20-04-2016 APH_RS03455 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 428 6.1E-20 T 20-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 2.5E-144 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 SUPERFAMILY SSF46589 1 111 3.14E-22 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 4.2E-20 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PIRSF PIRSF001529 1 423 2.1E-152 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PANTHER PTHR11778:SF0 1 428 4.6E-171 T 20-04-2016 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PANTHER PTHR11778 1 428 4.6E-171 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Gene3D G3DSA:3.30.930.10 104 418 2.0E-124 T 20-04-2016 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 SUPERFAMILY SSF55681 115 423 9.67E-86 T 20-04-2016 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 6.0E-34 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 36.874 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 9.3E-32 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 9.3E-32 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 9.3E-32 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 9.3E-32 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 9.3E-32 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APH_RS01885 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Gene3D G3DSA:1.10.287.40 1 90 2.2E-18 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Pfam PF00183 Hsp90 protein 214 632 1.5E-103 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 20-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PANTHER PTHR11528 3 633 5.9E-247 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Gene3D G3DSA:3.30.565.10 5 229 7.9E-75 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PANTHER PTHR11528:SF44 3 633 5.9E-247 T 20-04-2016 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 93 110 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 26 48 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 120 142 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 5 25 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 75 92 1.9E-54 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PIRSF PIRSF002583 2 637 1.3E-198 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SUPERFAMILY SSF54211 224 476 1.29E-83 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SUPERFAMILY SSF55874 5 213 1.38E-62 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 182 4.2E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SMART SM00387 27 183 0.0013 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SUPERFAMILY SSF110942 515 631 2.35E-28 T 20-04-2016 APH_RS03525 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 631 28.717 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APH_RS00120 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 SUPERFAMILY SSF53335 14 187 1.46E-25 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS00120 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 Gene3D G3DSA:3.40.50.150 25 252 3.7E-29 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS00120 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 PANTHER PTHR10108 1 150 6.8E-16 T 20-04-2016 APH_RS00120 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 PANTHER PTHR10108:SF721 1 150 6.8E-16 T 20-04-2016 APH_RS00120 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 Pfam PF08241 Methyltransferase domain 48 137 1.8E-15 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 Gene3D G3DSA:3.30.230.10 6 157 9.1E-40 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 Pfam PF08544 GHMP kinases C terminal 207 273 3.0E-8 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 PIRSF PIRSF010376 2 291 1.2E-67 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 262 1.9E-46 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 SUPERFAMILY SSF54211 4 157 2.05E-31 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 PANTHER PTHR20861 1 289 2.1E-47 T 20-04-2016 APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 Gene3D G3DSA:3.30.70.890 165 281 2.4E-19 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 SUPERFAMILY SSF55060 165 280 1.63E-20 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 285 28.216 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 Pfam PF00288 GHMP kinases N terminal domain 89 139 4.1E-6 T 20-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APH_RS02440 8426e8e46bbfbd41d8285c6e68fe3770 296 PANTHER PTHR20861:SF2 1 289 2.1E-47 T 20-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS04880 bfca3ccc1a0a7f264277b107bba6417a 402 Pfam PF13899 Thioredoxin-like 296 373 2.8E-6 T 20-04-2016 APH_RS04880 bfca3ccc1a0a7f264277b107bba6417a 402 Gene3D G3DSA:3.40.30.10 284 394 4.1E-8 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS04880 bfca3ccc1a0a7f264277b107bba6417a 402 PANTHER PTHR32234:SF3 1 402 4.2E-95 T 20-04-2016 APH_RS04880 bfca3ccc1a0a7f264277b107bba6417a 402 PANTHER PTHR32234 1 402 4.2E-95 T 20-04-2016 APH_RS04880 bfca3ccc1a0a7f264277b107bba6417a 402 SUPERFAMILY SSF52833 290 398 1.39E-9 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 SMART SM00878 336 443 2.3E-49 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 613 630 - T 20-04-2016 IPR001882 Biotin-binding site APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF51230 589 655 8.64E-17 T 20-04-2016 IPR011053 Single hybrid motif APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF00364 Biotin-requiring enzyme 593 655 8.9E-13 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.1E-43 T 20-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF56059 83 349 1.77E-69 T 20-04-2016 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF51246 332 446 1.26E-34 T 20-04-2016 IPR011054 Rudiment single hybrid motif APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Gene3D G3DSA:3.40.50.20 1 128 1.0E-47 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 2.7E-32 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Gene3D G3DSA:3.30.1490.20 129 202 1.2E-27 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.3E-77 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Gene3D G3DSA:3.30.470.20 203 447 1.8E-91 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF52440 1 113 1.37E-47 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 Gene3D G3DSA:2.40.50.100 589 656 2.1E-18 T 20-04-2016 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 PANTHER PTHR18866 538 656 1.7E-299 T 20-04-2016 APH_RS01590 c0a60aa98af3ff2221011ae72a43f81c 659 PANTHER PTHR18866 1 509 1.7E-299 T 20-04-2016 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 Pfam PF00361 Proton-conducting membrane transporter 136 437 1.4E-52 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 PANTHER PTHR22773 4 496 5.8E-105 T 20-04-2016 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 433 452 2.1E-16 T 20-04-2016 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 2.1E-16 T 20-04-2016 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 224 245 2.1E-16 T 20-04-2016 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 246 272 2.1E-16 T 20-04-2016 APH_RS00805 06ac45f71eafdf24a00339909b3a079b 500 PANTHER PTHR22773:SF46 4 496 5.8E-105 T 20-04-2016 APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 PIRSF PIRSF006630 1 600 3.7E-103 T 20-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 SUPERFAMILY SSF56317 3 217 4.53E-7 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 Gene3D G3DSA:3.40.50.620 332 596 1.3E-69 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 PANTHER PTHR23090 333 600 4.3E-71 T 20-04-2016 APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 Pfam PF02540 NAD synthase 333 589 2.1E-66 T 20-04-2016 IPR022310 NAD/GMP synthase APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 SUPERFAMILY SSF52402 332 597 2.79E-69 T 20-04-2016 APH_RS05865 3627e850a1dbfe1bb6865d60c1bbd39c 600 TIGRFAM TIGR00552 nadE: NAD+ synthetase 340 591 1.3E-58 T 20-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 Pfam PF00085 Thioredoxin 4 102 5.1E-27 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PRINTS PR00421 Thioredoxin family signature 23 31 1.07E-8 T 20-04-2016 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PRINTS PR00421 Thioredoxin family signature 71 82 1.07E-8 T 20-04-2016 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PRINTS PR00421 Thioredoxin family signature 31 40 1.07E-8 T 20-04-2016 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PANTHER PTHR10438 4 110 1.2E-34 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 Gene3D G3DSA:3.40.30.10 3 105 3.9E-32 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 99 4.2E-31 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PIRSF PIRSF000077 1 105 7.8E-34 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 SUPERFAMILY SSF52833 3 107 1.25E-33 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00380 2646ab8a1bbd18e0b90dcd57cda9f72a 110 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 10 25 - T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 PANTHER PTHR20941:SF1 8 270 9.7E-82 T 20-04-2016 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 9 266 8.8E-75 T 20-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 Pfam PF00809 Pterin binding enzyme 12 254 3.8E-64 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 44 57 - T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 SUPERFAMILY SSF51717 7 268 4.71E-75 T 20-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 PANTHER PTHR20941 8 270 9.7E-82 T 20-04-2016 APH_RS01100 0f651b94a77f4cc3088198f53dc89a1c 270 Gene3D G3DSA:3.20.20.20 7 267 1.5E-79 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APH_RS04070 4636e849f2221db015af98b33f6b18d7 160 PANTHER PTHR11560 5 157 1.9E-22 T 20-04-2016 APH_RS04070 4636e849f2221db015af98b33f6b18d7 160 Pfam PF00466 Ribosomal protein L10 3 98 1.3E-18 T 20-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APH_RS04070 4636e849f2221db015af98b33f6b18d7 160 SUPERFAMILY SSF160369 3 158 7.32E-34 T 20-04-2016 APH_RS04070 4636e849f2221db015af98b33f6b18d7 160 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 35 157 7.0E-4 T 20-04-2016 APH_RS01520 29a4fc6e5a6fe43e31114d8efe0e724e 152 PANTHER PTHR12901 4 150 2.4E-25 T 20-04-2016 APH_RS01520 29a4fc6e5a6fe43e31114d8efe0e724e 152 SUPERFAMILY SSF55961 8 150 7.41E-24 T 20-04-2016 APH_RS01520 29a4fc6e5a6fe43e31114d8efe0e724e 152 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 15 143 3.5E-16 T 20-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain APH_RS01520 29a4fc6e5a6fe43e31114d8efe0e724e 152 Gene3D G3DSA:3.30.530.20 8 150 9.7E-33 T 20-04-2016 IPR023393 START-like domain APH_RS02285 df433d752aae8ec56b116f26faff4c77 79 Pfam PF01026 TatD related DNase 9 61 4.5E-12 T 20-04-2016 IPR001130 TatD family GO:0016788 APH_RS02285 df433d752aae8ec56b116f26faff4c77 79 PANTHER PTHR10060:SF20 9 65 6.6E-17 T 20-04-2016 APH_RS02285 df433d752aae8ec56b116f26faff4c77 79 Gene3D G3DSA:3.20.20.140 9 62 1.0E-13 T 20-04-2016 APH_RS02285 df433d752aae8ec56b116f26faff4c77 79 PANTHER PTHR10060 9 65 6.6E-17 T 20-04-2016 IPR001130 TatD family GO:0016788 APH_RS02285 df433d752aae8ec56b116f26faff4c77 79 SUPERFAMILY SSF51556 9 62 6.8E-14 T 20-04-2016 IPR032466 Metal-dependent hydrolase APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF54849 139 203 6.87E-20 T 20-04-2016 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 Hamap MF_00600 60 kDa chaperonin [groL]. 1 547 35.139 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:1.10.560.10 9 195 1.5E-26 T 20-04-2016 IPR027413 GroEL-like equatorial domain APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 406 417 - T 20-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PANTHER PTHR11353 19 550 1.1E-164 T 20-04-2016 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PANTHER PTHR11353:SF64 19 550 1.1E-164 T 20-04-2016 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:3.50.7.10 196 334 1.3E-66 T 20-04-2016 IPR027409 GroEL-like apical domain APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF48592 407 524 4.25E-50 T 20-04-2016 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF48592 13 133 4.25E-50 T 20-04-2016 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:1.10.560.10 343 519 3.6E-29 T 20-04-2016 IPR027413 GroEL-like equatorial domain APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 527 1.0E-92 T 20-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 13 529 2.8E-188 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF52029 185 377 7.33E-75 T 20-04-2016 IPR027409 GroEL-like apical domain APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 26 52 2.2E-65 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 82 109 2.2E-65 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 399 420 2.2E-65 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 267 290 2.2E-65 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS01055 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 351 376 2.2E-65 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APH_RS05110 031414130a580056f964d7aa8fa8c0aa 176 SUPERFAMILY SSF142433 8 170 2.62E-43 T 20-04-2016 IPR008136 CinA, C-terminal APH_RS05110 031414130a580056f964d7aa8fa8c0aa 176 PANTHER PTHR13939:SF0 16 176 1.3E-39 T 20-04-2016 APH_RS05110 031414130a580056f964d7aa8fa8c0aa 176 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 22 169 8.7E-35 T 20-04-2016 IPR008136 CinA, C-terminal APH_RS05110 031414130a580056f964d7aa8fa8c0aa 176 Pfam PF02464 Competence-damaged protein 16 170 5.2E-45 T 20-04-2016 IPR008136 CinA, C-terminal APH_RS05110 031414130a580056f964d7aa8fa8c0aa 176 PANTHER PTHR13939 16 176 1.3E-39 T 20-04-2016 APH_RS05110 031414130a580056f964d7aa8fa8c0aa 176 Gene3D G3DSA:3.90.950.20 11 172 2.3E-47 T 20-04-2016 IPR008136 CinA, C-terminal APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 PANTHER PTHR11265 4 295 5.6E-126 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 PANTHER PTHR11265:SF0 4 295 5.6E-126 T 20-04-2016 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 291 5.8E-88 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 PIRSF PIRSF004486 1 295 9.4E-103 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 Pfam PF01795 MraW methylase family 3 292 1.1E-90 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 SUPERFAMILY SSF81799 111 214 2.09E-29 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 Gene3D G3DSA:3.40.50.150 4 107 4.8E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 Gene3D G3DSA:3.40.50.150 217 293 4.8E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 294 35.004 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 Gene3D G3DSA:1.10.150.170 110 216 1.7E-32 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 SUPERFAMILY SSF53335 214 293 1.18E-42 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02870 6d3c63d9897d665a5a99fc039a91ac68 295 SUPERFAMILY SSF53335 4 110 1.18E-42 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 Pfam PF01545 Cation efflux family 18 207 4.1E-42 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 SUPERFAMILY SSF160240 221 291 1.7E-7 T 20-04-2016 APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 SUPERFAMILY SSF161111 12 208 1.09E-48 T 20-04-2016 APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 PANTHER PTHR11562:SF17 5 295 3.2E-83 T 20-04-2016 APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 293 4.1E-76 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 Gene3D G3DSA:1.20.1510.10 13 207 7.8E-51 T 20-04-2016 IPR027469 Cation efflux protein transmembrane domain APH_RS05680 31b2a269bf063e3380af865241dd3a2c 297 PANTHER PTHR11562 5 295 3.2E-83 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 SMART SM00382 162 409 5.0E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 20 488 5.0E-242 T 20-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 SUPERFAMILY SSF52540 96 374 1.35E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 361 370 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 PANTHER PTHR15184 1 488 0.0 T 20-04-2016 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 Hamap MF_01347 ATP synthase subunit beta [atpB]. 18 488 55.499 T 20-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 PANTHER PTHR15184:SF8 1 488 0.0 T 20-04-2016 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 Gene3D G3DSA:3.40.50.300 95 371 5.0E-104 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 Gene3D G3DSA:2.40.10.170 18 94 1.6E-27 T 20-04-2016 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 23 92 3.8E-18 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 SUPERFAMILY SSF50615 20 94 1.33E-22 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 Gene3D G3DSA:1.10.1140.10 375 488 1.6E-51 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 SUPERFAMILY SSF47917 374 488 3.92E-50 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02160 4052c8c0b279e3bf3a3cf372dc3b17a2 489 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 370 5.0E-60 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 SUPERFAMILY SSF143243 23 184 1.31E-51 T 20-04-2016 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 PANTHER PTHR10884 45 184 3.5E-64 T 20-04-2016 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 80 138 5.0E-23 T 20-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 112 133 - T 20-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 34 151 4.3E-40 T 20-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 152 9.0E-39 T 20-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 PANTHER PTHR10884:SF10 45 184 3.5E-64 T 20-04-2016 APH_RS02255 ec36fed4e3ef38dd6f2612f049ca912e 188 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 159 27.741 T 20-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82866 288 488 5.23E-40 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82866 794 1024 1.31E-33 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:1.10.3850.10 798 1021 6.1E-40 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 Pfam PF00873 AcrB/AcrD/AcrF family 5 1018 1.6E-152 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82693 136 180 1.92E-11 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82693 266 322 1.92E-11 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.70.1430 41 140 7.4E-19 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:1.20.1640.10 284 491 8.4E-50 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PANTHER PTHR32063 1 1018 2.0E-207 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82714 182 262 1.96E-7 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82693 41 134 8.11E-18 T 20-04-2016 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.2090.10 181 263 1.3E-6 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 2.1E-30 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 2.1E-30 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 2.1E-30 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.1E-30 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.1E-30 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS01975 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.1E-30 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 322 5.4E-123 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 SUPERFAMILY SSF51569 2 325 2.2E-121 T 20-04-2016 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 Gene3D G3DSA:3.20.20.70 2 325 4.2E-127 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 3.2E-45 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 298 317 3.2E-45 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 243 259 3.2E-45 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 3.2E-45 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 283 3.2E-45 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 3.2E-45 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PANTHER PTHR11458 1 326 5.5E-138 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 SMART SM01004 3 324 3.7E-190 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 PIRSF PIRSF001415 1 327 3.0E-126 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03405 3ad58217a36f8e66476a758bc907177e 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 243 255 - T 20-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 Gene3D G3DSA:1.10.8.50 2 71 1.5E-25 T 20-04-2016 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 PANTHER PTHR10871 2 123 9.4E-54 T 20-04-2016 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 SUPERFAMILY SSF46946 2 113 6.22E-43 T 20-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 20-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 PIRSF PIRSF002134 1 123 1.4E-40 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 26.212 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.7E-51 T 20-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 Gene3D G3DSA:4.10.910.10 73 123 6.0E-26 T 20-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APH_RS01325 4cbe6406f1e4836c004dff7daf354614 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.7E-29 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 SMART SM00363 93 157 9.0E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 SMART SM01390 6 92 2.8E-25 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 27.756 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 92 1.6E-16 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 PANTHER PTHR11831:SF4 1 203 3.6E-50 T 20-04-2016 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 Gene3D G3DSA:3.10.290.10 96 193 2.3E-24 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 Pfam PF01479 S4 domain 94 140 9.4E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 Gene3D G3DSA:1.10.1050.10 4 95 2.4E-24 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 PANTHER PTHR11831 1 203 3.6E-50 T 20-04-2016 IPR022801 Ribosomal protein S4/S9 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 7 203 5.0E-64 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 SUPERFAMILY SSF55174 8 203 1.14E-52 T 20-04-2016 APH_RS03920 2d53349af3acf07ece88dd3aa4d98a77 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 20-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 APH_RS05280 fec721e0d771d4eb388da505a043d9a3 251 Pfam PF00156 Phosphoribosyl transferase domain 155 247 9.4E-10 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APH_RS05280 fec721e0d771d4eb388da505a043d9a3 251 SUPERFAMILY SSF53271 74 248 5.64E-31 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS05280 fec721e0d771d4eb388da505a043d9a3 251 Gene3D G3DSA:3.40.50.2020 74 249 5.1E-25 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS05280 fec721e0d771d4eb388da505a043d9a3 251 PANTHER PTHR11907 30 250 5.3E-38 T 20-04-2016 APH_RS05280 fec721e0d771d4eb388da505a043d9a3 251 PANTHER PTHR11907:SF9 30 250 5.3E-38 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.8.60 682 764 6.0E-19 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF52540 455 742 9.92E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 532 550 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF52540 183 427 3.25E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PANTHER PTHR11638 2 138 0.0 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PANTHER PTHR11638 163 773 0.0 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 338 1.4E-10 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM01086 669 760 2.2E-17 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.8.60 365 430 3.3E-25 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 669 749 4.0E-14 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF07724 AAA domain (Cdc48 subfamily) 501 663 5.9E-42 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PANTHER PTHR11638:SF111 2 138 0.0 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PANTHER PTHR11638:SF111 163 773 0.0 T 20-04-2016 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.1780.10 2 138 5.9E-27 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 505 523 2.5E-33 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 623 2.5E-33 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 547 565 2.5E-33 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 576 594 2.5E-33 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:3.40.50.300 456 681 6.6E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM00382 220 366 1.9E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM00382 501 637 1.6E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF81923 2 140 1.07E-39 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APH_RS02005 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:3.40.50.300 184 362 1.6E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PANTHER PTHR11946:SF5 2 803 3.1E-189 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Hamap MF_02005 Valine--tRNA ligase [valS]. 8 794 26.112 T 20-04-2016 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF52374 5 192 4.98E-114 T 20-04-2016 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF52374 352 587 4.98E-114 T 20-04-2016 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:1.10.730.10 580 753 2.0E-28 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 800 8.3E-207 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF50677 194 352 7.59E-38 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 3.4E-17 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 3.4E-17 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 464 485 3.4E-17 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 3.4E-17 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 3.4E-17 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 232 2.9E-47 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 234 579 9.6E-66 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Pfam PF08264 Anticodon-binding domain of tRNA 621 763 6.9E-26 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:3.90.740.10 197 345 3.5E-36 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:3.40.50.620 355 571 2.6E-108 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:3.40.50.620 9 190 2.6E-108 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF47323 594 801 9.53E-37 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04935 df064baa7a91493db8d5fc693ef9810d 806 PANTHER PTHR11946 2 803 3.1E-189 T 20-04-2016 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 Pfam PF00375 Sodium:dicarboxylate symporter family 6 388 5.2E-78 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 317 336 1.5E-20 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.5E-20 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 282 308 1.5E-20 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 69 94 1.5E-20 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 344 364 1.5E-20 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 216 235 1.5E-20 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 Gene3D G3DSA:1.10.3860.10 24 391 3.3E-76 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 SUPERFAMILY SSF118215 18 389 7.59E-77 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PANTHER PTHR11958 35 387 5.9E-63 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01875 8e24085ddfad7abb65d13c20c00d239f 396 PANTHER PTHR11958:SF44 35 387 5.9E-63 T 20-04-2016 APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 144 2.0E-7 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 Gene3D G3DSA:2.60.300.12 7 134 2.6E-23 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 PANTHER PTHR10072:SF26 9 71 1.7E-25 T 20-04-2016 APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 PANTHER PTHR10072:SF26 99 148 1.7E-25 T 20-04-2016 APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 SUPERFAMILY SSF89360 102 137 3.14E-18 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 SUPERFAMILY SSF89360 9 74 3.14E-18 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 PANTHER PTHR10072 9 71 1.7E-25 T 20-04-2016 APH_RS03245 eabb0a82808cc77dc608eb83d952540f 148 PANTHER PTHR10072 99 148 1.7E-25 T 20-04-2016 APH_RS02315 a0e3616c794acc4ee8228ab4b11e1af1 152 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 4 150 21.156 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS02315 a0e3616c794acc4ee8228ab4b11e1af1 152 SUPERFAMILY SSF52121 5 150 4.84E-37 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS02315 a0e3616c794acc4ee8228ab4b11e1af1 152 Gene3D G3DSA:3.40.50.960 4 148 3.3E-37 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS02315 a0e3616c794acc4ee8228ab4b11e1af1 152 PANTHER PTHR21058 1 151 6.2E-29 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS02315 a0e3616c794acc4ee8228ab4b11e1af1 152 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 9 147 2.3E-35 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS02315 a0e3616c794acc4ee8228ab4b11e1af1 152 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 146 2.4E-27 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 186 205 1.2E-16 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 159 174 1.2E-16 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 80 96 1.2E-16 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 108 123 1.2E-16 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 SUPERFAMILY SSF51064 152 207 2.35E-15 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Gene3D G3DSA:2.30.22.10 151 207 3.9E-22 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Gene3D G3DSA:3.90.20.20 56 150 2.8E-19 T 20-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 SUPERFAMILY SSF58014 63 151 2.88E-18 T 20-04-2016 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PANTHER PTHR21237 62 210 3.1E-41 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Pfam PF01025 GrpE 54 206 9.0E-44 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS00165 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Hamap MF_01151 Protein GrpE [grpE]. 2 207 16.246 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 272 288 5.7E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 296 309 5.7E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 5.7E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 5.7E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 5.7E-31 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF55186 556 711 2.22E-45 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF101353 247 443 6.67E-55 T 20-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PANTHER PTHR11777:SF9 1 872 0.0 T 20-04-2016 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 PANTHER PTHR11777 1 872 0.0 T 20-04-2016 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 849 7.9E-260 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF50447 455 556 2.47E-18 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 SMART SM00863 658 700 4.2E-19 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 Pfam PF01411 tRNA synthetases class II (A) 9 560 2.9E-202 T 20-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF55681 6 246 8.2E-102 T 20-04-2016 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 Gene3D G3DSA:3.30.930.10 5 242 1.5E-105 T 20-04-2016 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 156.536 T 20-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APH_RS04195 ad9b5902f216362822ee6e0993d22bbc 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 700 6.7E-18 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 SUPERFAMILY SSF55120 79 316 5.14E-67 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 PANTHER PTHR11079 6 323 9.2E-88 T 20-04-2016 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 SUPERFAMILY SSF55174 16 67 1.09E-5 T 20-04-2016 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 Pfam PF00849 RNA pseudouridylate synthase 91 248 2.4E-27 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 315 1.8E-79 T 20-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 PANTHER PTHR11079:SF73 6 323 9.2E-88 T 20-04-2016 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS01580 9e9de3e68f96b17e0a1109819870856d 324 Gene3D G3DSA:3.10.290.10 17 61 2.3E-5 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 770 6.3E-216 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 PANTHER PTHR12815:SF11 4 757 1.3E-129 T 20-04-2016 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:2.40.160.50 560 757 3.3E-4 T 20-04-2016 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF01103 Surface antigen 449 758 1.5E-51 T 20-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 PANTHER PTHR12815 4 757 1.3E-129 T 20-04-2016 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 PIRSF PIRSF006076 1 768 6.8E-192 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 350 422 1.0E-12 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 173 264 1.1E-7 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 91 169 7.8E-13 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 286 344 6.8E-6 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APH_RS04865 55bca574e738a6d016df3bc9e0572b35 772 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 772 20.528 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APH_RS03790 724bc9947545c170ff81dfe6e3b896a4 280 Pfam PF03618 Kinase/pyrophosphorylase 9 264 7.0E-85 T 20-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APH_RS03790 724bc9947545c170ff81dfe6e3b896a4 280 PANTHER PTHR31756 9 269 5.0E-79 T 20-04-2016 APH_RS03790 724bc9947545c170ff81dfe6e3b896a4 280 PANTHER PTHR31756:SF3 9 269 5.0E-79 T 20-04-2016 APH_RS03790 724bc9947545c170ff81dfe6e3b896a4 280 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 7 270 52.611 T 20-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 SUPERFAMILY SSF52374 4 160 1.05E-38 T 20-04-2016 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.2E-34 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.2E-34 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.2E-34 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.2E-34 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 59 1.5E-16 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 160 2.1E-56 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 PANTHER PTHR21342:SF1 1 160 2.0E-62 T 20-04-2016 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 Gene3D G3DSA:3.40.50.620 3 160 7.2E-47 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 163 32.208 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 Pfam PF01467 Cytidylyltransferase-like 7 138 6.8E-20 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APH_RS02720 585d3c933ca9b31e4cc74dfa7165cb85 168 PANTHER PTHR21342 1 160 2.0E-62 T 20-04-2016 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 PANTHER PTHR10947:SF0 2 788 4.2E-185 T 20-04-2016 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF03484 tRNA synthetase B5 domain 402 468 2.2E-15 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.56.10 3 38 7.7E-14 T 20-04-2016 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SMART SM00873 210 383 1.3E-61 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF56037 216 396 2.04E-53 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF54991 696 788 1.31E-19 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.50.40.10 225 391 8.7E-60 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 788 3.4E-19 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF46955 401 472 1.28E-15 T 20-04-2016 IPR009061 Putative DNA-binding domain APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SMART SM00874 399 468 7.6E-23 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:2.40.50.140 43 224 7.8E-35 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 PANTHER PTHR10947 2 788 4.2E-185 T 20-04-2016 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 788 3.4E-206 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF55681 464 681 6.46E-41 T 20-04-2016 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.70.380 699 788 2.9E-20 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SMART SM00896 697 788 9.3E-29 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF01588 Putative tRNA binding domain 44 129 8.3E-18 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.56.20 399 472 2.8E-21 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF50249 43 193 3.43E-31 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.930.10 492 683 5.0E-51 T 20-04-2016 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 782 35.061 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS01345 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF03483 B3/4 domain 215 383 8.0E-52 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 PANTHER PTHR17224:SF1 2 148 5.6E-54 T 20-04-2016 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 SUPERFAMILY SSF53178 2 179 3.53E-53 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 174 30.588 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 Pfam PF01195 Peptidyl-tRNA hydrolase 3 170 9.8E-48 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 PANTHER PTHR17224 2 148 5.6E-54 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 Gene3D G3DSA:3.40.50.1470 2 179 5.6E-55 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APH_RS05270 d864ef29403f3689dd6b3c3b73f9d52c 183 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 172 5.8E-45 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 SMART SM00562 2 139 1.4E-78 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 Gene3D G3DSA:3.30.70.141 2 138 1.2E-56 T 20-04-2016 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 SUPERFAMILY SSF54919 2 139 3.8E-56 T 20-04-2016 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 PANTHER PTHR11349 2 138 3.6E-65 T 20-04-2016 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 137 34.355 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 Pfam PF00334 Nucleoside diphosphate kinase 3 137 1.4E-54 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 2.8E-38 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 2.8E-38 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 2.8E-38 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 2.8E-38 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS04900 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 2.8E-38 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 PANTHER PTHR11649:SF3 12 286 2.2E-92 T 20-04-2016 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 279 1.4E-61 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 SUPERFAMILY SSF54814 182 287 3.47E-31 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 Pfam PF01926 50S ribosome-binding GTPase 12 126 6.2E-20 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 PANTHER PTHR11649 12 286 2.2E-92 T 20-04-2016 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 Pfam PF07650 KH domain 209 284 7.7E-15 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 SUPERFAMILY SSF52540 11 215 8.9E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01535 66cc7bf882dea074f252f68245a08796 295 Hamap MF_00367 GTPase Era [era]. 7 294 28.227 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 169 3.1E-20 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS01535 66cc7bf882dea074f252f68245a08796 295 Gene3D G3DSA:3.30.300.20 191 287 6.6E-30 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APH_RS01535 66cc7bf882dea074f252f68245a08796 295 Gene3D G3DSA:3.40.50.300 12 171 5.3E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 49 251 1.4E-21 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 SMART SM00662 43 257 1.4E-56 T 20-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 SUPERFAMILY SSF56553 73 201 2.88E-30 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 PANTHER PTHR32108:SF0 47 357 2.0E-108 T 20-04-2016 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 279 335 6.2E-25 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 PANTHER PTHR32108 47 357 2.0E-108 T 20-04-2016 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 24 344 32.766 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Gene3D G3DSA:2.170.120.12 73 182 4.2E-30 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 284 353 4.0E-35 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Gene3D G3DSA:3.30.1360.10 45 71 2.4E-27 T 20-04-2016 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Gene3D G3DSA:3.30.1360.10 200 254 2.4E-27 T 20-04-2016 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 SUPERFAMILY SSF55257 38 73 5.89E-26 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 SUPERFAMILY SSF55257 202 254 5.89E-26 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Gene3D G3DSA:1.10.150.20 276 355 4.6E-36 T 20-04-2016 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 45 343 2.7E-95 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 83 174 6.0E-14 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS01335 26e02258a9f565f37411b7e1d43044ca 363 SUPERFAMILY SSF47789 278 353 6.8E-27 T 20-04-2016 APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 165 2.4E-54 T 20-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 165 1.1E-57 T 20-04-2016 APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 20-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 SUPERFAMILY SSF52833 11 168 4.14E-52 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 Gene3D G3DSA:3.40.30.10 86 168 8.1E-10 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 PANTHER PTHR10371 9 170 3.4E-83 T 20-04-2016 APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 PANTHER PTHR10371:SF3 9 170 3.4E-83 T 20-04-2016 APH_RS03010 5affaf954099bc7f6dc59fc0afc464a4 171 PIRSF PIRSF000216 1 171 3.9E-66 T 20-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 112 555 4.2E-206 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 Pfam PF13667 ThiC-associated domain 9 77 2.7E-18 T 20-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 PANTHER PTHR30557 105 135 0.0 T 20-04-2016 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 PANTHER PTHR30557 156 553 0.0 T 20-04-2016 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 PANTHER PTHR30557 5 76 0.0 T 20-04-2016 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 112 556 54.668 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 Pfam PF01964 Radical SAM ThiC family 113 553 5.3E-194 T 20-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 PANTHER PTHR30557:SF1 105 135 0.0 T 20-04-2016 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 PANTHER PTHR30557:SF1 156 553 0.0 T 20-04-2016 APH_RS02515 f403b73aed32482d5abf07bcd421f3e0 557 PANTHER PTHR30557:SF1 5 76 0.0 T 20-04-2016 APH_RS05050 3ed98d9bac7c3a60d9d1cb5dd87b16a9 177 Gene3D G3DSA:2.40.160.20 102 158 1.4E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05050 3ed98d9bac7c3a60d9d1cb5dd87b16a9 177 Pfam PF01617 Surface antigen 80 162 2.4E-20 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 SUPERFAMILY SSF51735 1 122 4.99E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 PIRSF PIRSF001553 1 292 3.2E-126 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 20-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.8E-34 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.8E-34 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 2.8E-34 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.8E-34 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 Gene3D G3DSA:3.40.50.720 2 119 4.9E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 SUPERFAMILY SSF52210 123 289 1.7E-50 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 SMART SM00881 4 100 2.9E-37 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.6E-136 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 Pfam PF02629 CoA binding domain 6 99 8.2E-33 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 PANTHER PTHR11117 1 295 2.8E-186 T 20-04-2016 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 Gene3D G3DSA:3.40.50.261 120 289 1.1E-68 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS04180 45002473ff7e6de1c1ccec94675af12a 295 Pfam PF00549 CoA-ligase 151 272 2.0E-18 T 20-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 SUPERFAMILY SSF53328 5 197 5.1E-57 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 186 29.994 T 20-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 Pfam PF00551 Formyl transferase 6 178 1.8E-52 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 PANTHER PTHR10520:SF10 6 192 4.9E-83 T 20-04-2016 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 PANTHER PTHR10520 6 192 4.9E-83 T 20-04-2016 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 Gene3D G3DSA:3.40.50.170 5 193 1.9E-63 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS01010 848cd311f9a8ec32d372122322b33d78 211 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 189 3.9E-63 T 20-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APH_RS05435 b92095c3ec9799fe5c2f336199bda791 86 Pfam PF07330 Protein of unknown function (DUF1467) 3 74 9.1E-15 T 20-04-2016 IPR009935 Protein of unknown function DUF1467 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 3 474 6.8E-249 T 20-04-2016 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 SUPERFAMILY SSF53659 2 339 9.0E-111 T 20-04-2016 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 Gene3D G3DSA:3.40.718.10 2 357 1.6E-118 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 PANTHER PTHR11835:SF43 4 347 6.8E-173 T 20-04-2016 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 20-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 SMART SM01329 4 335 2.6E-142 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 335 2.3E-88 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APH_RS04680 c0d132a57b51e7b85cfc4ca1fd681b0c 477 PANTHER PTHR11835 4 347 6.8E-173 T 20-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 PANTHER PTHR20852:SF15 6 140 3.0E-204 T 20-04-2016 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 PANTHER PTHR20852:SF15 161 472 3.0E-204 T 20-04-2016 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 470 1.5E-173 T 20-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 SUPERFAMILY SSF54368 6 100 2.35E-30 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 Gene3D G3DSA:3.10.20.70 6 107 7.4E-33 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 20-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 SUPERFAMILY SSF55931 105 470 1.67E-118 T 20-04-2016 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 Gene3D G3DSA:3.30.590.10 108 457 3.9E-120 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 SMART SM01230 104 382 9.6E-125 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 PANTHER PTHR20852 6 140 3.0E-204 T 20-04-2016 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 PANTHER PTHR20852 161 472 3.0E-204 T 20-04-2016 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 Pfam PF00120 Glutamine synthetase, catalytic domain 105 469 1.5E-118 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS05040 4167e49c22c6a5747c5ab5351534c6b7 472 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 96 6.6E-26 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 385 3.0E-125 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 389 46.494 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 PANTHER PTHR21148:SF26 120 386 1.6E-129 T 20-04-2016 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 PANTHER PTHR21148:SF26 1 101 1.6E-129 T 20-04-2016 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 Pfam PF01702 Queuine tRNA-ribosyltransferase 149 390 1.7E-75 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 Gene3D G3DSA:3.20.20.105 2 390 6.4E-139 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 PANTHER PTHR21148 120 386 1.6E-129 T 20-04-2016 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 PANTHER PTHR21148 1 101 1.6E-129 T 20-04-2016 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 SUPERFAMILY SSF51713 5 389 2.49E-126 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APH_RS01380 dc7d1a86b1dd30ea1e3ce7290f173556 392 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 386 2.7E-123 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.10380 7 162 1.3E-47 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.10750 571 722 7.1E-45 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SMART SM01274 20 153 1.3E-74 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 PANTHER PTHR23406:SF23 374 444 1.2E-168 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 PANTHER PTHR23406:SF23 33 357 1.2E-168 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 PIRSF PIRSF036684 2 750 0.0 T 20-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Pfam PF00390 Malic enzyme, N-terminal domain 22 152 1.0E-23 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.720 163 450 9.2E-81 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 ProSitePatterns PS00331 Malic enzymes signature. 161 177 - T 20-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SUPERFAMILY SSF53223 12 163 3.67E-51 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SUPERFAMILY SSF51735 165 444 2.77E-82 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SMART SM00919 165 402 1.2E-130 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SUPERFAMILY SSF53659 432 747 2.88E-75 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Pfam PF03949 Malic enzyme, NAD binding domain 167 358 6.4E-20 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 PANTHER PTHR23406 374 444 1.2E-168 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 PANTHER PTHR23406 33 357 1.2E-168 T 20-04-2016 APH_RS00195 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Pfam PF01515 Phosphate acetyl/butaryl transferase 432 744 1.1E-73 T 20-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 PANTHER PTHR11624:SF1 11 316 2.8E-300 T 20-04-2016 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 PANTHER PTHR11624:SF1 346 663 2.8E-300 T 20-04-2016 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 17 321 2.8E-117 T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 SUPERFAMILY SSF52922 536 664 4.43E-38 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 SUPERFAMILY SSF52518 350 525 1.03E-67 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01480 c2a76add77edb65637295a9bd573088b 667 Gene3D G3DSA:3.40.50.920 538 663 3.8E-38 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 Pfam PF02780 Transketolase, C-terminal domain 551 654 1.6E-7 T 20-04-2016 IPR033248 Transketolase, C-terminal domain APH_RS01480 c2a76add77edb65637295a9bd573088b 667 ProSitePatterns PS00801 Transketolase signature 1. 23 43 - T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 Gene3D G3DSA:3.40.50.970 351 529 9.3E-72 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01480 c2a76add77edb65637295a9bd573088b 667 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 20-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APH_RS01480 c2a76add77edb65637295a9bd573088b 667 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 5.1E-44 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS01480 c2a76add77edb65637295a9bd573088b 667 SUPERFAMILY SSF52518 11 314 8.49E-107 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01480 c2a76add77edb65637295a9bd573088b 667 PANTHER PTHR11624 11 316 2.8E-300 T 20-04-2016 IPR033247 Transketolase family APH_RS01480 c2a76add77edb65637295a9bd573088b 667 PANTHER PTHR11624 346 663 2.8E-300 T 20-04-2016 IPR033247 Transketolase family APH_RS01480 c2a76add77edb65637295a9bd573088b 667 SMART SM00861 354 526 2.1E-66 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS01480 c2a76add77edb65637295a9bd573088b 667 Gene3D G3DSA:3.40.50.970 13 316 2.0E-112 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01480 c2a76add77edb65637295a9bd573088b 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 17 659 1.8E-233 T 20-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF100920 382 537 8.89E-62 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 467 483 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 59 67 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 9 22 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 199 209 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 37 49 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 363 383 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 139 159 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 386 405 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 332 348 7.23E-79 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 9 603 3.4E-279 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PANTHER PTHR19375 7 648 0.0 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF100934 505 601 1.31E-16 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Pfam PF00012 Hsp70 protein 10 603 4.1E-258 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.420.40 10 58 2.8E-66 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.420.40 120 196 2.8E-66 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:1.20.1270.10 530 603 2.8E-22 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 13 20 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.420.40 197 226 1.6E-33 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.420.40 316 359 1.6E-33 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF53067 188 380 5.32E-64 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.30.30 59 109 5.6E-19 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF53067 10 185 8.55E-61 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:2.60.34.10 388 529 1.2E-71 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 PANTHER PTHR19375:SF173 7 648 0.0 T 20-04-2016 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 7 640 35.966 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APH_RS01515 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.90.640.10 227 312 2.6E-27 T 20-04-2016 APH_RS04870 8a0ac113b8263d4544a57ec5d5928ec2 362 Gene3D G3DSA:2.30.42.10 106 206 7.6E-18 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04870 8a0ac113b8263d4544a57ec5d5928ec2 362 Pfam PF02163 Peptidase family M50 21 348 2.7E-68 T 20-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APH_RS04870 8a0ac113b8263d4544a57ec5d5928ec2 362 PANTHER PTHR22939:SF78 138 362 3.4E-43 T 20-04-2016 APH_RS04870 8a0ac113b8263d4544a57ec5d5928ec2 362 SUPERFAMILY SSF50156 101 206 4.99E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04870 8a0ac113b8263d4544a57ec5d5928ec2 362 SMART SM00228 127 197 0.0079 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04870 8a0ac113b8263d4544a57ec5d5928ec2 362 PANTHER PTHR22939 138 362 3.4E-43 T 20-04-2016 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 52 72 9.8E-43 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 111 131 9.8E-43 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 90 110 9.8E-43 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 194 218 9.8E-43 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 35 52 9.8E-43 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 146 172 9.8E-43 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 35 214 7.2E-64 T 20-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 PANTHER PTHR30071 1 214 8.6E-54 T 20-04-2016 APH_RS00755 bc9f51e62f8980b9339da514a9ffdd7e 235 Pfam PF01578 Cytochrome C assembly protein 16 174 5.8E-27 T 20-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APH_RS01465 0af30f31862a9e4b88153fbbee624f11 191 PANTHER PTHR30580 2 171 6.6E-48 T 20-04-2016 APH_RS05595 244169f6994c8dab6ea8edbe1ce15865 277 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 19 265 7.9E-67 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APH_RS05595 244169f6994c8dab6ea8edbe1ce15865 277 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 16 271 17.468 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APH_RS05595 244169f6994c8dab6ea8edbe1ce15865 277 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 15 271 1.4E-62 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APH_RS05595 244169f6994c8dab6ea8edbe1ce15865 277 PANTHER PTHR30589:SF0 8 270 7.9E-75 T 20-04-2016 APH_RS05595 244169f6994c8dab6ea8edbe1ce15865 277 PANTHER PTHR30589 8 270 7.9E-75 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PANTHER PTHR22773:SF50 1 571 1.7E-207 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.3E-62 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 Pfam PF00361 Proton-conducting membrane transporter 128 420 1.3E-80 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PANTHER PTHR22773 1 571 1.7E-207 T 20-04-2016 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 618 3.5E-209 T 20-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 4.5E-8 T 20-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 418 440 4.5E-8 T 20-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 4.5E-8 T 20-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APH_RS01940 e8fbbe71092e3b99af50f14b30c8b60a 625 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 116 1.1E-22 T 20-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 Gene3D G3DSA:3.40.50.1260 10 182 1.7E-60 T 20-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 19 29 - T 20-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 Pfam PF00162 Phosphoglycerate kinase 11 382 1.4E-122 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 383 30.403 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 Gene3D G3DSA:3.40.50.1270 187 382 1.2E-58 T 20-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PIRSF PIRSF000724 3 384 1.9E-121 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 371 384 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 310 335 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 5.5E-56 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 SUPERFAMILY SSF53748 9 382 3.06E-116 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PANTHER PTHR11406 14 383 2.2E-134 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APH_RS05365 ec07f9c5d628793e3e5cc2ba2537bb29 384 PANTHER PTHR11406:SF0 14 383 2.2E-134 T 20-04-2016 APH_RS00580 2013574317c68a5e9dae4761ac2a81e1 185 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 26.557 T 20-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APH_RS00580 2013574317c68a5e9dae4761ac2a81e1 185 SUPERFAMILY SSF51283 3 183 3.01E-48 T 20-04-2016 IPR029054 dUTPase-like APH_RS00580 2013574317c68a5e9dae4761ac2a81e1 185 Gene3D G3DSA:2.70.40.10 3 183 1.1E-58 T 20-04-2016 IPR029054 dUTPase-like APH_RS00580 2013574317c68a5e9dae4761ac2a81e1 185 PANTHER PTHR11241:SF1 1 185 2.0E-60 T 20-04-2016 APH_RS00580 2013574317c68a5e9dae4761ac2a81e1 185 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 13 182 4.1E-45 T 20-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APH_RS00580 2013574317c68a5e9dae4761ac2a81e1 185 PANTHER PTHR11241 1 185 2.0E-60 T 20-04-2016 APH_RS04825 6e009b4b671b8a8dc32462a503e9d04e 232 Pfam PF01617 Surface antigen 151 229 5.5E-21 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04825 6e009b4b671b8a8dc32462a503e9d04e 232 Gene3D G3DSA:2.40.160.20 180 217 2.8E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:3.30.420.40 201 350 8.3E-25 T 20-04-2016 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PANTHER PTHR19375:SF176 16 587 4.4E-154 T 20-04-2016 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 Pfam PF00012 Hsp70 protein 19 541 1.1E-130 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 SUPERFAMILY SSF100920 378 528 9.68E-40 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PANTHER PTHR19375 16 587 4.4E-154 T 20-04-2016 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:3.30.420.40 122 200 1.6E-46 T 20-04-2016 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:3.30.420.40 18 80 1.6E-46 T 20-04-2016 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 194 207 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:2.60.34.10 360 541 1.6E-48 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 SUPERFAMILY SSF53067 189 371 4.1E-41 T 20-04-2016 APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 141 161 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 380 399 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 354 374 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 323 339 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 45 57 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 17 30 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 200 210 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 460 476 9.0E-41 T 20-04-2016 IPR013126 Heat shock protein 70 family APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 21 28 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APH_RS02825 95f656d25ce7859bf390d1ef04c1c46f 592 SUPERFAMILY SSF53067 18 186 2.16E-42 T 20-04-2016 APH_RS00225 9be9c61cae4efa9a1839bc5fc76e23b0 153 Pfam PF03477 ATP cone domain 49 136 6.9E-14 T 20-04-2016 IPR005144 ATP-cone domain APH_RS00225 9be9c61cae4efa9a1839bc5fc76e23b0 153 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 1.5E-44 T 20-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APH_RS00225 9be9c61cae4efa9a1839bc5fc76e23b0 153 PANTHER PTHR30455:SF2 2 149 4.3E-51 T 20-04-2016 APH_RS00225 9be9c61cae4efa9a1839bc5fc76e23b0 153 PANTHER PTHR30455 2 149 4.3E-51 T 20-04-2016 APH_RS00225 9be9c61cae4efa9a1839bc5fc76e23b0 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 66.538 T 20-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APH_RS05860 9cf32cba602ca26841db810eee3e1ec7 67 Gene3D G3DSA:3.40.50.620 12 56 5.0E-7 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS05860 9cf32cba602ca26841db810eee3e1ec7 67 SUPERFAMILY SSF52374 9 61 9.85E-6 T 20-04-2016 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 PIRSF PIRSF038885 8 407 8.8E-194 T 20-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 SUPERFAMILY SSF81648 279 396 1.68E-43 T 20-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 276 377 4.0E-41 T 20-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 SUPERFAMILY SSF81342 18 278 2.98E-108 T 20-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 Pfam PF00033 Cytochrome b/b6/petB 34 220 3.5E-79 T 20-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 PANTHER PTHR19271:SF5 13 392 5.4E-217 T 20-04-2016 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 PANTHER PTHR19271 13 392 5.4E-217 T 20-04-2016 APH_RS01775 f33bea1ecd92d41f2161139d60ba1847 408 Gene3D G3DSA:1.20.810.10 17 393 4.0E-173 T 20-04-2016 IPR027387 Cytochrome b/b6-like domain APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 PANTHER PTHR23407 1 173 1.3E-32 T 20-04-2016 APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 169 2.6E-31 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 PIRSF PIRSF006806 2 172 8.8E-30 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 169 2.4E-22 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 PANTHER PTHR23407:SF1 1 173 1.3E-32 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 Gene3D G3DSA:3.40.50.10420 6 173 3.2E-35 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APH_RS02880 19070d6ebdaf45f4e8165e9efecd57bf 174 SUPERFAMILY SSF100950 6 173 3.77E-38 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 PANTHER PTHR11615:SF115 343 685 1.1E-268 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 SUPERFAMILY SSF54862 75 211 1.93E-37 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Gene3D G3DSA:3.40.50.740 271 406 5.7E-45 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Gene3D G3DSA:3.40.50.740 494 632 5.7E-45 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 SUPERFAMILY SSF53706 213 630 5.92E-90 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 20-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 658 683 9.2E-13 T 20-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 PANTHER PTHR11615 343 685 1.1E-268 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.3E-15 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 SMART SM00929 83 123 7.1E-20 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 20-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 PANTHER PTHR11615:SF115 3 317 1.1E-268 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 SUPERFAMILY SSF54292 2 73 4.71E-19 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF00384 Molybdopterin oxidoreductase 271 604 3.6E-63 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 20-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 601 3.7E-217 T 20-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 118 4.5E-16 T 20-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 PANTHER PTHR11615 3 317 1.1E-268 T 20-04-2016 APH_RS02950 930e357ba6bc828b37f99fe493a24b60 692 Gene3D G3DSA:3.10.20.30 2 54 4.9E-6 T 20-04-2016 IPR012675 Beta-grasp domain APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 SUPERFAMILY SSF49503 124 259 4.65E-56 T 20-04-2016 IPR008972 Cupredoxin APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 143 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 90 102 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 102 122 3.7E-46 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 PANTHER PTHR22888 22 259 1.4E-96 T 20-04-2016 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 27 113 2.7E-17 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 Gene3D G3DSA:1.10.287.90 27 117 1.3E-24 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 SUPERFAMILY SSF81464 23 117 4.74E-25 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 Gene3D G3DSA:2.60.40.420 119 259 4.3E-56 T 20-04-2016 IPR008972 Cupredoxin APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 129 246 8.5E-53 T 20-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 20-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 APH_RS04310 c5db7234c2c2599d319eee9b53d87bc9 262 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 9.4E-64 T 20-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 Pfam PF00411 Ribosomal protein S11 13 123 2.5E-38 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 124 28.711 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 5 121 1.2E-50 T 20-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 SUPERFAMILY SSF53137 7 124 2.03E-39 T 20-04-2016 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 PIRSF PIRSF002131 1 124 9.5E-43 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 PANTHER PTHR11759 5 124 4.1E-42 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_RS01330 b00addddd44dc2a40ef17b5189d3adba 124 Gene3D G3DSA:3.30.420.80 4 124 1.4E-42 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_RS04370 69bdc90145b58abbf1fdae054d24c3a0 212 Gene3D G3DSA:2.10.109.10 102 211 3.0E-12 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APH_RS04370 69bdc90145b58abbf1fdae054d24c3a0 212 SMART SM00530 14 70 1.5E-9 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APH_RS04370 69bdc90145b58abbf1fdae054d24c3a0 212 Gene3D G3DSA:1.10.260.40 10 74 9.7E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APH_RS04370 69bdc90145b58abbf1fdae054d24c3a0 212 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 14 76 2.2E-9 T 20-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 APH_RS04370 69bdc90145b58abbf1fdae054d24c3a0 212 SUPERFAMILY SSF51306 118 210 2.88E-13 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APH_RS04370 69bdc90145b58abbf1fdae054d24c3a0 212 SUPERFAMILY SSF47413 10 75 1.6E-10 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.09E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.09E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.09E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.09E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.09E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.30.70.240 404 485 8.0E-31 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:2.40.30.10 208 306 1.1E-20 T 20-04-2016 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.40.50.300 7 207 8.1E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF52540 5 209 8.43E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF50447 154 302 2.21E-26 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF54980 402 516 1.1E-27 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.30.70.870 307 403 1.5E-30 T 20-04-2016 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF00679 Elongation factor G C-terminus 400 483 2.6E-21 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 602 6.6E-272 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 148 8.7E-24 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF03144 Elongation factor Tu domain 2 222 292 1.2E-7 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF00009 Elongation factor Tu GTP binding domain 7 197 1.8E-55 T 20-04-2016 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:2.40.50.250 486 580 3.6E-40 T 20-04-2016 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF54980 307 391 2.73E-10 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PANTHER PTHR23115:SF14 6 596 1.3E-257 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 SMART SM00838 399 487 0.0018 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS02010 17bcc9b5c6320c0650ffbba086f06a95 612 PANTHER PTHR23115 6 596 1.3E-257 T 20-04-2016 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 PIRSF PIRSF003095 5 437 3.0E-73 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 PANTHER PTHR30560 23 435 2.1E-46 T 20-04-2016 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 SUPERFAMILY SSF54534 143 253 5.5E-21 T 20-04-2016 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 173 244 6.4E-11 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Gene3D G3DSA:3.10.50.40 167 229 5.1E-9 T 20-04-2016 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Hamap MF_00303 Trigger factor [tig]. 5 423 15.587 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 SUPERFAMILY SSF102735 8 140 4.19E-24 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Gene3D G3DSA:1.10.3120.10 230 390 3.1E-26 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 SUPERFAMILY SSF109998 265 434 1.96E-26 T 20-04-2016 IPR027304 Trigger factor/SurA domain APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 296 417 5.2E-14 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Gene3D G3DSA:3.30.70.1050 7 128 2.8E-23 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 TIGRFAM TIGR00115 tig: trigger factor 15 417 3.9E-101 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APH_RS03835 8d1ea24a1264a5a5e945552839591c54 439 Pfam PF05697 Bacterial trigger factor protein (TF) 12 154 1.0E-27 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APH_RS05855 f69d66479f9f30ff14d8cf01bc2b5a19 77 PANTHER PTHR19375 1 73 1.2E-16 T 20-04-2016 APH_RS05855 f69d66479f9f30ff14d8cf01bc2b5a19 77 SUPERFAMILY SSF53067 1 73 5.98E-11 T 20-04-2016 APH_RS05855 f69d66479f9f30ff14d8cf01bc2b5a19 77 Gene3D G3DSA:3.90.640.10 18 72 1.3E-15 T 20-04-2016 APH_RS05855 f69d66479f9f30ff14d8cf01bc2b5a19 77 Pfam PF06723 MreB/Mbl protein 1 72 9.3E-20 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS05855 f69d66479f9f30ff14d8cf01bc2b5a19 77 PANTHER PTHR19375:SF117 1 73 1.2E-16 T 20-04-2016 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 28 37 - T 20-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 SUPERFAMILY SSF51726 21 342 2.62E-81 T 20-04-2016 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 Gene3D G3DSA:3.20.20.210 20 342 1.0E-95 T 20-04-2016 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 PANTHER PTHR21091 1 343 3.9E-85 T 20-04-2016 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 21 342 8.6E-93 T 20-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 PANTHER PTHR21091:SF2 1 343 3.9E-85 T 20-04-2016 APH_RS00100 264fad3509cd99f86b63a39acffb34e9 343 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 20 342 1.5E-100 T 20-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 Gene3D G3DSA:3.20.20.70 127 259 1.2E-48 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 SUPERFAMILY SSF51690 106 270 2.75E-52 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 SUPERFAMILY SSF54675 3 105 1.12E-21 T 20-04-2016 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 PANTHER PTHR32179 5 275 1.1E-81 T 20-04-2016 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 104 3.5E-21 T 20-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 270 7.2E-50 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 PIRSF PIRSF006250 1 274 5.4E-74 T 20-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APH_RS00080 a690886a4f25a98f718135766ee93e41 275 Gene3D G3DSA:3.90.1170.20 3 126 9.6E-33 T 20-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APH_RS00080 a690886a4f25a98f718135766ee93e41 275 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 6 270 6.8E-75 T 20-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 APH_RS00410 3ea3b8ed33dcd49d7880472a415d5e26 156 PANTHER PTHR10520 18 137 6.0E-60 T 20-04-2016 APH_RS00410 3ea3b8ed33dcd49d7880472a415d5e26 156 Gene3D G3DSA:3.40.50.170 14 138 6.1E-46 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS00410 3ea3b8ed33dcd49d7880472a415d5e26 156 SUPERFAMILY SSF53328 14 142 1.83E-43 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS00410 3ea3b8ed33dcd49d7880472a415d5e26 156 Pfam PF00551 Formyl transferase 14 123 2.6E-39 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS00410 3ea3b8ed33dcd49d7880472a415d5e26 156 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 14 134 1.3E-45 T 20-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 334 42.515 T 20-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 Pfam PF01409 tRNA synthetases class II core domain (F) 94 333 2.9E-97 T 20-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 332 1.5E-98 T 20-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 PANTHER PTHR11538 94 342 1.1E-87 T 20-04-2016 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 SUPERFAMILY SSF46589 15 101 1.57E-15 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 89 8.4E-17 T 20-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 Gene3D G3DSA:3.30.930.10 11 334 2.2E-115 T 20-04-2016 APH_RS00280 9ec9493df066036387449e0c14b50aae 342 SUPERFAMILY SSF55681 94 335 1.47E-73 T 20-04-2016 APH_RS04855 2baaea4982b7eded7c64e9582d9ead25 145 PANTHER PTHR30272 3 145 1.2E-56 T 20-04-2016 APH_RS04855 2baaea4982b7eded7c64e9582d9ead25 145 Gene3D G3DSA:3.10.129.10 2 144 5.8E-50 T 20-04-2016 IPR029069 HotDog domain APH_RS04855 2baaea4982b7eded7c64e9582d9ead25 145 Pfam PF07977 FabA-like domain 12 137 1.2E-31 T 20-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APH_RS04855 2baaea4982b7eded7c64e9582d9ead25 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 145 31.601 T 20-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APH_RS04855 2baaea4982b7eded7c64e9582d9ead25 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 143 1.8E-51 T 20-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APH_RS04855 2baaea4982b7eded7c64e9582d9ead25 145 SUPERFAMILY SSF54637 2 143 7.31E-43 T 20-04-2016 IPR029069 HotDog domain APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 SUPERFAMILY SSF56059 110 305 7.42E-57 T 20-04-2016 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 Gene3D G3DSA:3.40.50.20 10 118 4.7E-27 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 358 35.851 T 20-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 15 354 5.0E-105 T 20-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 Gene3D G3DSA:3.30.470.20 162 355 5.0E-67 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 SUPERFAMILY SSF52440 11 107 2.73E-20 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 PANTHER PTHR11609 1 354 7.9E-108 T 20-04-2016 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 Gene3D G3DSA:3.30.1490.20 120 161 2.5E-10 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 PANTHER PTHR11609:SF5 1 354 7.9E-108 T 20-04-2016 APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 SUPERFAMILY SSF51246 312 356 8.63E-10 T 20-04-2016 IPR011054 Rudiment single hybrid motif APH_RS04455 cbef2192fe87f14f40f1bb222ebb7505 358 Pfam PF02222 ATP-grasp domain 119 288 9.7E-53 T 20-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APH_RS00675 8fb3e44ebe3ff54ae84ca704824a72cf 109 PANTHER PTHR21011 2 94 2.3E-17 T 20-04-2016 APH_RS00675 8fb3e44ebe3ff54ae84ca704824a72cf 109 SUPERFAMILY SSF54995 2 104 2.49E-27 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS00675 8fb3e44ebe3ff54ae84ca704824a72cf 109 Pfam PF01250 Ribosomal protein S6 4 92 6.8E-21 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS00675 8fb3e44ebe3ff54ae84ca704824a72cf 109 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 16.61 T 20-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS00675 8fb3e44ebe3ff54ae84ca704824a72cf 109 Gene3D G3DSA:3.30.70.60 3 104 2.9E-27 T 20-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APH_RS00675 8fb3e44ebe3ff54ae84ca704824a72cf 109 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 94 8.7E-18 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 SUPERFAMILY SSF51735 126 288 2.28E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 290 37.461 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 113 134 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 208 237 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 37 59 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 159 179 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 78 105 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 1.6E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 PANTHER PTHR10025 8 296 5.0E-137 T 20-04-2016 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 SUPERFAMILY SSF53223 7 125 6.91E-40 T 20-04-2016 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 Gene3D G3DSA:3.40.192.10 10 144 4.3E-46 T 20-04-2016 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 79 104 - T 20-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 124 6.4E-39 T 20-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 289 6.7E-64 T 20-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 Gene3D G3DSA:3.40.50.720 145 271 1.1E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00775 d960f951f9f6076c9c1e4fc9d33fa155 304 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 20-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 Gene3D G3DSA:2.40.160.20 303 375 2.0E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 Gene3D G3DSA:2.40.160.20 87 134 2.0E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 Gene3D G3DSA:2.40.160.20 29 45 2.0E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 SUPERFAMILY SSF56925 88 119 1.91E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 SUPERFAMILY SSF56925 297 377 1.91E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 SUPERFAMILY SSF56925 27 46 1.91E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05155 3db785c7e2eb3ace0201129f1663b5ae 416 Pfam PF01617 Surface antigen 27 416 5.1E-81 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00085 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 192 19.365 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APH_RS00085 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 PANTHER PTHR30309 1 191 6.9E-59 T 20-04-2016 APH_RS00085 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 SMART SM01207 7 184 4.8E-75 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APH_RS00085 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 191 2.7E-51 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APH_RS00085 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 PANTHER PTHR30309:SF0 1 191 6.9E-59 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APH_RS00085 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 183 4.3E-48 T 20-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 SUPERFAMILY SSF50331 242 340 3.74E-7 T 20-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 PANTHER PTHR24220 5 261 1.6E-86 T 20-04-2016 APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 SUPERFAMILY SSF52540 4 246 2.34E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 Pfam PF00005 ABC transporter 25 166 1.2E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 SMART SM00382 29 215 1.5E-18 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 PANTHER PTHR24220:SF123 5 261 1.6E-86 T 20-04-2016 APH_RS03905 c6b4db48bee264fed20c1784e64b4c51 342 Gene3D G3DSA:3.40.50.300 4 234 1.5E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 PANTHER PTHR21343:SF0 4 207 3.2E-33 T 20-04-2016 APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 Pfam PF13500 AAA domain 3 198 6.9E-31 T 20-04-2016 APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 Gene3D G3DSA:3.40.50.300 2 200 5.7E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 SUPERFAMILY SSF52540 3 211 9.18E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 PIRSF PIRSF006755 1 213 2.8E-35 T 20-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 214 20.221 T 20-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 171 9.5E-33 T 20-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS04955 844e4d61e82eee2042808fd9b0d46e7c 225 PANTHER PTHR21343 4 207 3.2E-33 T 20-04-2016 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.90.580.10 10 99 5.3E-31 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 PANTHER PTHR30313 4 411 5.6E-92 T 20-04-2016 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 SMART SM00493 248 319 5.8E-13 T 20-04-2016 IPR006171 Toprim domain APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF13662 Toprim domain 249 313 4.7E-14 T 20-04-2016 IPR006171 Toprim domain APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 PIRSF PIRSF002811 3 602 4.3E-169 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 TIGRFAM TIGR01391 dnaG: DNA primase 11 410 4.6E-109 T 20-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.90.980.10 112 229 9.5E-28 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF01807 CHC2 zinc finger 10 101 7.9E-31 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 240 3.0E-30 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 SMART SM00400 38 92 7.2E-26 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.40.1360.10 230 354 4.7E-34 T 20-04-2016 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 SUPERFAMILY SSF57783 9 99 2.21E-28 T 20-04-2016 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 Hamap MF_00974 DNA primase [dnaG]. 5 602 22.663 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APH_RS02430 da52fbafe26adb4900ea11cd0436c075 607 SUPERFAMILY SSF56731 112 415 1.96E-79 T 20-04-2016 APH_RS01830 22442e9118da219e5541d332c312397b 249 Gene3D G3DSA:3.50.50.60 126 186 1.1E-6 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01830 22442e9118da219e5541d332c312397b 249 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 52 66 - T 20-04-2016 IPR020595 MnmG-related, conserved site APH_RS01830 22442e9118da219e5541d332c312397b 249 SUPERFAMILY SSF51905 124 198 1.24E-6 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01830 22442e9118da219e5541d332c312397b 249 Pfam PF13932 GidA associated domain 181 243 2.6E-30 T 20-04-2016 IPR026904 GidA associated domain 3 APH_RS01830 22442e9118da219e5541d332c312397b 249 Pfam PF01134 Glucose inhibited division protein A 47 174 1.3E-57 T 20-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APH_RS01830 22442e9118da219e5541d332c312397b 249 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 147 170 - T 20-04-2016 IPR020595 MnmG-related, conserved site APH_RS01830 22442e9118da219e5541d332c312397b 249 PANTHER PTHR11806 48 243 6.4E-127 T 20-04-2016 APH_RS01830 22442e9118da219e5541d332c312397b 249 PANTHER PTHR11806:SF0 48 243 6.4E-127 T 20-04-2016 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 219 5.4E-54 T 20-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 232 95.857 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 Gene3D G3DSA:3.40.1280.10 1 159 6.4E-63 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APH_RS05120 648b70fd3417067ace75ea62531aee26 232 PANTHER PTHR32125:SF1 1 226 3.0E-95 T 20-04-2016 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 PANTHER PTHR32125 1 226 3.0E-95 T 20-04-2016 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 Gene3D G3DSA:1.10.1270.20 160 225 7.8E-28 T 20-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 225 2.2E-77 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 PIRSF PIRSF000386 1 232 2.4E-88 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_RS05120 648b70fd3417067ace75ea62531aee26 232 SUPERFAMILY SSF75217 1 226 1.7E-89 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:1.10.1030.10 400 534 2.9E-42 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SMART SM00851 960 1046 4.9E-25 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02142 MGS-like domain 963 1045 4.1E-16 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 2.4E-62 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 881 1.0E-29 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF48108 396 547 2.48E-44 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF52440 1 127 5.04E-47 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.40.50.20 4 108 5.3E-41 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1067 12.252 T 20-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SMART SM01096 422 544 3.9E-59 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.30.1490.20 693 752 6.1E-17 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.30.1490.20 143 200 5.5E-13 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.40.50.1380 942 1078 1.1E-34 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 544 3.1E-37 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.30.470.20 201 399 3.1E-75 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.30.470.20 753 939 3.9E-69 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF52440 561 681 5.32E-40 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 1.4E-62 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 298 305 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1055 0.0 T 20-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.40.50.20 535 669 3.0E-49 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PANTHER PTHR11405:SF5 1 1083 0.0 T 20-04-2016 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 PANTHER PTHR11405 1 1083 0.0 T 20-04-2016 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF56059 680 938 9.9E-94 T 20-04-2016 APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF52335 940 1077 3.01E-34 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS01095 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF56059 128 401 6.01E-98 T 20-04-2016 APH_RS04200 327ff1c4d473f81603085a3fb2ee9327 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 361 1.7E-17 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04200 327ff1c4d473f81603085a3fb2ee9327 369 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 73 363 8.7E-76 T 20-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APH_RS04200 327ff1c4d473f81603085a3fb2ee9327 369 PANTHER PTHR30425 73 369 9.4E-87 T 20-04-2016 APH_RS04200 327ff1c4d473f81603085a3fb2ee9327 369 PANTHER PTHR30425:SF3 73 369 9.4E-87 T 20-04-2016 APH_RS04200 327ff1c4d473f81603085a3fb2ee9327 369 SUPERFAMILY SSF161098 113 356 1.11E-32 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04200 327ff1c4d473f81603085a3fb2ee9327 369 Gene3D G3DSA:1.10.3720.10 77 364 4.8E-40 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 Pfam PF04384 Iron-sulphur cluster assembly 2 63 1.2E-24 T 20-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 SUPERFAMILY SSF140319 1 61 1.07E-20 T 20-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 PANTHER PTHR37532:SF1 1 65 2.4E-16 T 20-04-2016 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 PANTHER PTHR37532 1 65 2.4E-16 T 20-04-2016 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.9E-28 T 20-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 PIRSF PIRSF039003 1 63 2.0E-29 T 20-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_RS03865 743a73b4d558f1d542f44fe4490b6c4e 65 Gene3D G3DSA:1.10.10.600 1 63 6.1E-24 T 20-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_RS05015 76f3268c8d1ff60e8f3d69d1a2f8ba14 176 Pfam PF01617 Surface antigen 89 169 5.3E-20 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05015 76f3268c8d1ff60e8f3d69d1a2f8ba14 176 Gene3D G3DSA:2.40.160.20 125 163 1.3E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 SUPERFAMILY SSF51735 5 244 3.36E-81 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.7E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.7E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.7E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.7E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.8E-63 T 20-04-2016 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PANTHER PTHR24322:SF328 152 184 6.5E-50 T 20-04-2016 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PANTHER PTHR24322:SF328 11 136 6.5E-50 T 20-04-2016 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PANTHER PTHR24322 152 184 6.5E-50 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PANTHER PTHR24322 11 136 6.5E-50 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 242 8.8E-91 T 20-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 5.6E-5 T 20-04-2016 APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.5E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.5E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.5E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02785 03a79af4f0787409809f80fef15f4f6c 245 Gene3D G3DSA:3.40.50.720 1 244 7.2E-83 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 PANTHER PTHR22976:SF1 3 308 3.0E-145 T 20-04-2016 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 SMART SM00876 219 311 2.5E-39 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 PANTHER PTHR22976 3 308 3.0E-145 T 20-04-2016 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 219 309 4.1E-18 T 20-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 Gene3D G3DSA:3.20.20.70 4 309 9.4E-97 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 SUPERFAMILY SSF102114 4 309 1.31E-86 T 20-04-2016 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 TIGRFAM TIGR00433 bioB: biotin synthase 13 309 4.9E-121 T 20-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 PIRSF PIRSF001619 1 317 7.4E-127 T 20-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 Hamap MF_01694 Biotin synthase [bioB]. 4 312 41.848 T 20-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 SMART SM00729 42 254 5.7E-38 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APH_RS00955 7c76682e401ecf6efd745b480611c4df 322 Pfam PF04055 Radical SAM superfamily 50 206 8.6E-15 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 4 467 1.5E-154 T 20-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 PANTHER PTHR11911:SF6 295 483 7.8E-219 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF51412 212 471 4.97E-118 T 20-04-2016 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF51412 3 86 4.97E-118 T 20-04-2016 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 291 303 - T 20-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 4 480 79.129 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 PANTHER PTHR11911 4 277 7.8E-219 T 20-04-2016 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 PANTHER PTHR11911 295 483 7.8E-219 T 20-04-2016 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 PANTHER PTHR11911:SF6 4 277 7.8E-219 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 Gene3D G3DSA:3.20.20.70 4 479 1.3E-192 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 SMART SM00116 92 140 1.2E-12 T 20-04-2016 IPR000644 CBS domain APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 SMART SM00116 153 201 1.1E-5 T 20-04-2016 IPR000644 CBS domain APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00571 CBS domain 91 136 3.0E-13 T 20-04-2016 IPR000644 CBS domain APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00571 CBS domain 145 196 8.8E-7 T 20-04-2016 IPR000644 CBS domain APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 4 448 3.4E-187 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 PIRSF PIRSF000130 1 482 9.2E-199 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF54631 59 199 9.24E-33 T 20-04-2016 APH_RS00415 4a39cf3f5ea873a28215619819f49f68 486 SMART SM01240 3 467 3.9E-300 T 20-04-2016 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 SUPERFAMILY SSF50104 126 270 4.33E-59 T 20-04-2016 IPR008991 Translation protein SH3-like domain APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 PANTHER PTHR13691 1 269 2.9E-127 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 269 2.2E-119 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:2.30.30.30 120 195 3.4E-29 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 PANTHER PTHR13691:SF5 1 269 2.9E-127 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 276 44.644 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 SUPERFAMILY SSF50249 3 123 1.58E-43 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:2.40.50.140 1 114 2.9E-45 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.3E-30 T 20-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 SMART SM01383 42 118 5.8E-45 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 20-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 PIRSF PIRSF002158 7 275 5.3E-102 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:4.10.950.10 196 270 1.9E-34 T 20-04-2016 IPR014726 Ribosomal protein L2, domain 3 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 1.6E-54 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS01235 a32969606a53d23d2559cd5a13250d54 276 SMART SM01382 124 252 7.8E-84 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 PANTHER PTHR10458 2 182 1.5E-57 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 Gene3D G3DSA:3.90.45.10 3 183 4.8E-58 T 20-04-2016 IPR023635 Peptide deformylase APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 Hamap MF_00163 Peptide deformylase [def]. 2 181 29.359 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 SUPERFAMILY SSF56420 3 183 1.96E-56 T 20-04-2016 IPR023635 Peptide deformylase APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 PIRSF PIRSF004749 1 187 1.5E-50 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 178 2.8E-46 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 Pfam PF01327 Polypeptide deformylase 4 171 4.6E-51 T 20-04-2016 IPR023635 Peptide deformylase APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 120 138 1.2E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 108 119 1.2E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 139 168 1.2E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS05570 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 35 64 1.2E-33 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS03970 8138688259972d6ab5d9c232b4f985b8 459 SUPERFAMILY SSF55205 24 448 8.67E-37 T 20-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APH_RS03970 8138688259972d6ab5d9c232b4f985b8 459 Gene3D G3DSA:3.65.10.10 40 249 1.1E-16 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APH_RS03970 8138688259972d6ab5d9c232b4f985b8 459 Gene3D G3DSA:3.65.10.10 250 430 6.4E-14 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APH_RS03970 8138688259972d6ab5d9c232b4f985b8 459 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 40 432 3.1E-21 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APH_RS03970 8138688259972d6ab5d9c232b4f985b8 459 PANTHER PTHR21090:SF5 43 433 3.6E-15 T 20-04-2016 APH_RS03970 8138688259972d6ab5d9c232b4f985b8 459 PANTHER PTHR21090 43 433 3.6E-15 T 20-04-2016 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 SUPERFAMILY SSF56925 103 134 3.77E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 SUPERFAMILY SSF56925 313 426 3.77E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 SUPERFAMILY SSF56925 43 61 3.77E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 Pfam PF01617 Surface antigen 43 429 2.5E-64 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 Gene3D G3DSA:2.40.160.20 102 149 5.1E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 Gene3D G3DSA:2.40.160.20 43 60 5.1E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02775 6fcf1749e87bc60c957733827ea04d37 429 Gene3D G3DSA:2.40.160.20 313 419 5.1E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01640 6ecf959be3026459cba60a7a074ce92c 928 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 562 756 1.6E-16 T 20-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 71 81 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 187 327 6.0E-60 T 20-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 9 330 4.1E-114 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 213 221 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 Gene3D G3DSA:3.30.300.10 84 187 4.2E-26 T 20-04-2016 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 56 1.8E-6 T 20-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 Gene3D G3DSA:3.30.300.10 7 79 4.4E-12 T 20-04-2016 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 SUPERFAMILY SSF55973 66 186 1.22E-37 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 SUPERFAMILY SSF55973 187 333 5.3E-60 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 PANTHER PTHR11964 26 333 6.4E-133 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 Gene3D G3DSA:3.30.300.10 198 332 1.7E-57 T 20-04-2016 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 SUPERFAMILY SSF55973 7 66 3.37E-8 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 PANTHER PTHR11964:SF1 26 333 6.4E-133 T 20-04-2016 APH_RS00270 21c7af065822f5d7c21a3fe57cd38f08 341 Pfam PF02772 S-adenosylmethionine synthetase, central domain 70 185 1.1E-31 T 20-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS01080 73cb32003a65930874710f6358826f80 216 PANTHER PTHR14359 3 212 5.5E-52 T 20-04-2016 APH_RS01080 73cb32003a65930874710f6358826f80 216 PANTHER PTHR14359:SF20 3 212 5.5E-52 T 20-04-2016 APH_RS01080 73cb32003a65930874710f6358826f80 216 Gene3D G3DSA:3.40.50.10300 3 211 1.0E-57 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APH_RS01080 73cb32003a65930874710f6358826f80 216 SUPERFAMILY SSF102645 3 211 2.75E-56 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APH_RS01080 73cb32003a65930874710f6358826f80 216 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 3 181 9.7E-50 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 PANTHER PTHR30231:SF0 4 202 1.4E-69 T 20-04-2016 APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 SUPERFAMILY SSF53098 2 175 1.66E-52 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 224 6.6E-81 T 20-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 Pfam PF00929 Exonuclease 6 165 2.5E-38 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 PANTHER PTHR30231 4 202 1.4E-69 T 20-04-2016 APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 200 5.4E-48 T 20-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 SMART SM00479 4 174 1.6E-52 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APH_RS03005 902b4fd83ce03fa3bc0a31d5c6e45f68 244 Gene3D G3DSA:3.30.420.10 3 175 1.8E-61 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS01760 82ffae870536d632b4da964aa23034cf 264 Pfam PF00950 ABC 3 transport family 8 259 1.6E-50 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APH_RS01760 82ffae870536d632b4da964aa23034cf 264 PANTHER PTHR30477 1 263 2.5E-40 T 20-04-2016 APH_RS01760 82ffae870536d632b4da964aa23034cf 264 PANTHER PTHR30477:SF0 1 263 2.5E-40 T 20-04-2016 APH_RS01760 82ffae870536d632b4da964aa23034cf 264 SUPERFAMILY SSF81345 5 256 2.09E-22 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 45 70 1.7E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 28 43 1.7E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 7 26 1.7E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 PANTHER PTHR10031:SF0 5 73 3.7E-12 T 20-04-2016 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 PANTHER PTHR10031 5 73 3.7E-12 T 20-04-2016 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 Gene3D G3DSA:1.20.20.10 6 71 4.4E-18 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 Pfam PF00137 ATP synthase subunit C 7 69 1.4E-11 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 SUPERFAMILY SSF81333 3 71 8.24E-16 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APH_RS04780 658774fadc02ee9dbe5d963f46dab684 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 5 72 12.961 T 20-04-2016 APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 Gene3D G3DSA:3.40.50.720 3 236 4.3E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PANTHER PTHR24322 159 191 2.9E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PANTHER PTHR24322 12 141 2.9E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 SUPERFAMILY SSF51735 5 236 4.17E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PANTHER PTHR24322:SF337 159 191 2.9E-36 T 20-04-2016 APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PANTHER PTHR24322:SF337 12 141 2.9E-36 T 20-04-2016 APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.3E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS01040 e2f040906fde35cab0cf70e147d35226 248 Pfam PF00106 short chain dehydrogenase 9 202 1.2E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS03850 60045d22c772f32fc9b5d8d7ef479e5f 166 PIRSF PIRSF006162 1 166 6.6E-45 T 20-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APH_RS03850 60045d22c772f32fc9b5d8d7ef479e5f 166 Pfam PF04608 Phosphatidylglycerophosphatase A 6 160 4.3E-40 T 20-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APH_RS03850 60045d22c772f32fc9b5d8d7ef479e5f 166 PANTHER PTHR36305 6 166 6.2E-27 T 20-04-2016 APH_RS03850 60045d22c772f32fc9b5d8d7ef479e5f 166 SUPERFAMILY SSF101307 5 159 1.19E-29 T 20-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 Gene3D G3DSA:3.40.47.10 4 268 1.4E-68 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 SUPERFAMILY SSF53901 5 263 1.07E-67 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 5 420 1.4E-180 T 20-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 PANTHER PTHR11712 1 423 5.3E-189 T 20-04-2016 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 PIRSF PIRSF000447 2 423 4.0E-170 T 20-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 PANTHER PTHR11712:SF273 1 423 5.3E-189 T 20-04-2016 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 SUPERFAMILY SSF53901 226 422 4.32E-70 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 Gene3D G3DSA:3.40.47.10 275 422 4.3E-59 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 266 380 3.2E-40 T 20-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 256 1.2E-53 T 20-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 SMART SM00825 Beta-ketoacyl synthase 7 423 6.9E-16 T 20-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APH_RS03690 9221f2eeb19cff4eb0a8d2f471e04033 423 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 165 181 - T 20-04-2016 IPR018201 Beta-ketoacyl synthase, active site APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 SUPERFAMILY SSF56420 13 173 3.14E-39 T 20-04-2016 IPR023635 Peptide deformylase APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 PIRSF PIRSF004749 3 185 2.1E-32 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 Pfam PF01327 Polypeptide deformylase 13 171 4.7E-35 T 20-04-2016 IPR023635 Peptide deformylase APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 140 169 4.8E-21 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 121 139 4.8E-21 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 108 119 4.8E-21 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 34 63 4.8E-21 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 PANTHER PTHR10458 14 162 9.1E-35 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 Gene3D G3DSA:3.90.45.10 13 178 3.4E-41 T 20-04-2016 IPR023635 Peptide deformylase APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 13 175 4.4E-31 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS04000 004cfd74cd39a25d2467468acccf4c67 197 Hamap MF_00163 Peptide deformylase [def]. 2 186 20.878 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APH_RS02445 6c68de8367761d08be769a1add684e99 315 Pfam PF01207 Dihydrouridine synthase (Dus) 11 311 9.1E-104 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_RS02445 6c68de8367761d08be769a1add684e99 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 20-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_RS02445 6c68de8367761d08be769a1add684e99 315 PIRSF PIRSF006621 1 315 1.4E-102 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_RS02445 6c68de8367761d08be769a1add684e99 315 Gene3D G3DSA:1.10.1200.80 248 313 4.6E-19 T 20-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APH_RS02445 6c68de8367761d08be769a1add684e99 315 SUPERFAMILY SSF51395 8 313 8.06E-90 T 20-04-2016 APH_RS02445 6c68de8367761d08be769a1add684e99 315 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 7 314 1.5E-116 T 20-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APH_RS02445 6c68de8367761d08be769a1add684e99 315 Gene3D G3DSA:3.20.20.70 7 235 5.9E-79 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS02445 6c68de8367761d08be769a1add684e99 315 PANTHER PTHR11082:SF25 6 314 9.9E-122 T 20-04-2016 APH_RS02445 6c68de8367761d08be769a1add684e99 315 PANTHER PTHR11082 6 314 9.9E-122 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_RS05285 fc50790a31c924e1e2f32654dc236acc 571 SUPERFAMILY SSF51735 406 536 1.32E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05285 fc50790a31c924e1e2f32654dc236acc 571 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 9.0E-58 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APH_RS05285 fc50790a31c924e1e2f32654dc236acc 571 Pfam PF02254 TrkA-N domain 408 521 7.8E-20 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APH_RS05285 fc50790a31c924e1e2f32654dc236acc 571 PANTHER PTHR16254:SF6 1 562 1.7E-177 T 20-04-2016 APH_RS05285 fc50790a31c924e1e2f32654dc236acc 571 Gene3D G3DSA:3.40.50.720 402 536 1.1E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05285 fc50790a31c924e1e2f32654dc236acc 571 PANTHER PTHR16254 1 562 1.7E-177 T 20-04-2016 APH_RS04720 89478c76d92f9029be4d867106251b1c 313 Pfam PF01617 Surface antigen 27 141 9.6E-31 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04720 89478c76d92f9029be4d867106251b1c 313 Gene3D G3DSA:2.40.160.20 87 134 8.0E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04720 89478c76d92f9029be4d867106251b1c 313 Gene3D G3DSA:2.40.160.20 29 45 8.0E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04930 f5a78452d050eb876bf4589eda91de06 87 Gene3D G3DSA:3.40.50.300 37 87 8.8E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04930 f5a78452d050eb876bf4589eda91de06 87 PANTHER PTHR22942 1 87 1.5E-37 T 20-04-2016 APH_RS04930 f5a78452d050eb876bf4589eda91de06 87 Pfam PF00154 recA bacterial DNA recombination protein 13 87 1.9E-31 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS04930 f5a78452d050eb876bf4589eda91de06 87 SUPERFAMILY SSF52540 11 86 2.99E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04930 f5a78452d050eb876bf4589eda91de06 87 PANTHER PTHR22942:SF1 1 87 1.5E-37 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 SUPERFAMILY SSF50677 220 402 4.19E-41 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PANTHER PTHR11946 232 560 0.0 T 20-04-2016 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PANTHER PTHR11946 1 199 0.0 T 20-04-2016 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PANTHER PTHR11946 589 823 0.0 T 20-04-2016 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 215 390 6.2E-52 T 20-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 SUPERFAMILY SSF52374 403 639 8.45E-136 T 20-04-2016 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 SUPERFAMILY SSF52374 2 219 8.45E-136 T 20-04-2016 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 824 20.338 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 146 162 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 474 492 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 543 553 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 208 227 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 120 137 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 178 191 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 510 532 2.7E-44 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 19 824 1.0E-283 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 404 558 3.9E-12 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 586 629 2.0E-9 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Pfam PF08264 Anticodon-binding domain of tRNA 667 776 2.2E-14 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Gene3D G3DSA:1.10.730.10 619 762 1.4E-33 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 SUPERFAMILY SSF47323 633 825 1.46E-22 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PANTHER PTHR11946:SF7 232 560 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PANTHER PTHR11946:SF7 1 199 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 PANTHER PTHR11946:SF7 589 823 0.0 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Gene3D G3DSA:3.40.50.620 412 618 3.4E-137 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Gene3D G3DSA:3.40.50.620 1 215 3.4E-137 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Gene3D G3DSA:3.90.740.10 216 411 1.7E-44 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APH_RS02290 36c77bdd32c9cc121986eb3bde1b9ee2 826 Pfam PF09334 tRNA synthetases class I (M) 29 164 4.9E-20 T 20-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 Pfam PF02811 PHP domain 4 165 8.4E-29 T 20-04-2016 IPR004013 PHP domain GO:0003824 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 SUPERFAMILY SSF89550 1 254 8.24E-15 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 PANTHER PTHR32294:SF0 2 1121 0.0 T 20-04-2016 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 SMART SM00481 3 70 2.8E-20 T 20-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 PANTHER PTHR32294 2 1121 0.0 T 20-04-2016 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 Gene3D G3DSA:3.20.20.140 1 247 3.0E-22 T 20-04-2016 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 713 6.7E-168 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 2 998 0.0 T 20-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS03975 c2b15076c2361ec03f0f86ec603ab83b 1124 Pfam PF14579 Helix-hairpin-helix motif 786 873 7.7E-18 T 20-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 PANTHER PTHR21071:SF4 1 302 1.8E-72 T 20-04-2016 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 Pfam PF01565 FAD binding domain 38 162 6.8E-16 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 Gene3D G3DSA:3.30.465.10 89 212 1.9E-30 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 28 297 6.9E-46 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 SUPERFAMILY SSF56176 23 203 1.03E-35 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 Gene3D G3DSA:3.30.43.10 19 83 8.4E-7 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 SUPERFAMILY SSF56194 194 297 2.75E-25 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 68.164 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 Gene3D G3DSA:3.90.78.10 218 298 5.5E-21 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 PANTHER PTHR21071 1 302 1.8E-72 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APH_RS03060 af3a48f4822029e3488208ce888c043c 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 295 3.3E-20 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 204 223 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 Pfam PF00266 Aminotransferase class-V 13 377 1.0E-80 T 20-04-2016 IPR000192 Aminotransferase class V domain APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 9 404 53.19 T 20-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 Gene3D G3DSA:3.40.640.10 25 261 8.5E-96 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 PIRSF PIRSF005572 10 393 1.2E-126 T 20-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 Gene3D G3DSA:3.90.1150.10 262 382 1.3E-42 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 SUPERFAMILY SSF53383 13 400 2.82E-103 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 PANTHER PTHR11601 12 410 1.1E-232 T 20-04-2016 APH_RS02805 57f9ed9c40b736d66e69f21a4fe99809 412 PANTHER PTHR11601:SF34 12 410 1.1E-232 T 20-04-2016 APH_RS02930 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 262 283 9.72E-24 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02930 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 231 250 9.72E-24 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02930 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 158 175 9.72E-24 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02930 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 66 85 9.72E-24 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02930 4122605e60a1391beac7508644031d77 285 Pfam PF00231 ATP synthase 5 284 2.2E-58 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02930 4122605e60a1391beac7508644031d77 285 SUPERFAMILY SSF52943 2 284 1.57E-60 T 20-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APH_RS02930 4122605e60a1391beac7508644031d77 285 PANTHER PTHR11693 1 285 8.5E-51 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02930 4122605e60a1391beac7508644031d77 285 Gene3D G3DSA:3.40.1380.10 67 182 1.0E-15 T 20-04-2016 APH_RS02930 4122605e60a1391beac7508644031d77 285 Gene3D G3DSA:1.10.287.80 3 36 1.8E-39 T 20-04-2016 APH_RS02930 4122605e60a1391beac7508644031d77 285 Gene3D G3DSA:1.10.287.80 218 284 1.8E-39 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PANTHER PTHR22912 1 318 6.6E-146 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 304 4.8E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 20-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PANTHER PTHR22912:SF48 1 318 6.6E-146 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 6.3E-35 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 6.3E-35 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.3E-35 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.3E-35 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 6.3E-35 T 20-04-2016 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 SUPERFAMILY SSF51905 9 317 1.0E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 10 315 2.4E-115 T 20-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 278 296 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 9.3E-75 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 Gene3D G3DSA:3.50.50.60 8 112 1.1E-29 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS02755 a5e3768bd53914576beaefe417c39d2f 321 Gene3D G3DSA:3.50.50.60 113 310 2.2E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PIRSF PIRSF001369 36 411 1.4E-136 T 20-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 ProSitePatterns PS00480 Citrate synthase signature. 296 308 - T 20-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 Gene3D G3DSA:1.10.580.10 51 273 2.8E-78 T 20-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 12 411 7.5E-155 T 20-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 SUPERFAMILY SSF48256 6 410 4.58E-137 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 289 309 9.3E-48 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 352 368 9.3E-48 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 372 386 9.3E-48 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 160 173 9.3E-48 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 212 227 9.3E-48 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 234 262 9.3E-48 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 Pfam PF00285 Citrate synthase, C-terminal domain 45 405 7.0E-119 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 PANTHER PTHR11739 41 410 5.8E-148 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APH_RS04980 7767f3a5b0385983daf884037079b4a3 411 Gene3D G3DSA:1.10.230.10 274 366 5.3E-39 T 20-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APH_RS03890 58ac488c87c87151b316d53aee867235 243 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS03890 58ac488c87c87151b316d53aee867235 243 PANTHER PTHR24220 26 239 1.8E-56 T 20-04-2016 APH_RS03890 58ac488c87c87151b316d53aee867235 243 Pfam PF00005 ABC transporter 41 170 4.9E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS03890 58ac488c87c87151b316d53aee867235 243 Gene3D G3DSA:3.40.50.300 23 233 1.0E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03890 58ac488c87c87151b316d53aee867235 243 SMART SM00382 49 221 5.1E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS03890 58ac488c87c87151b316d53aee867235 243 SUPERFAMILY SSF52540 23 235 9.35E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04665 5bbf407004b56c76720826527306bd32 314 Gene3D G3DSA:2.40.160.20 29 45 1.2E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04665 5bbf407004b56c76720826527306bd32 314 Gene3D G3DSA:2.40.160.20 87 130 1.2E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04665 5bbf407004b56c76720826527306bd32 314 Pfam PF01617 Surface antigen 27 141 9.9E-31 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS01135 4f450936ff1b89a81943505334c1a373 359 Pfam PF03969 AFG1-like ATPase 42 359 3.5E-74 T 20-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APH_RS01135 4f450936ff1b89a81943505334c1a373 359 PANTHER PTHR12169 1 359 1.4E-81 T 20-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APH_RS01135 4f450936ff1b89a81943505334c1a373 359 Gene3D G3DSA:3.40.50.300 44 196 4.7E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01135 4f450936ff1b89a81943505334c1a373 359 SUPERFAMILY SSF52540 23 174 6.25E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 SUPERFAMILY SSF52954 325 424 4.25E-23 T 20-04-2016 IPR004154 Anticodon-binding APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 320 8.8E-39 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PANTHER PTHR11451:SF3 232 425 2.6E-120 T 20-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PANTHER PTHR11451:SF3 4 216 2.6E-120 T 20-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PANTHER PTHR11451 232 425 2.6E-120 T 20-04-2016 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PANTHER PTHR11451 4 216 2.6E-120 T 20-04-2016 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 SUPERFAMILY SSF55681 21 233 8.81E-88 T 20-04-2016 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 SUPERFAMILY SSF55681 268 340 8.81E-88 T 20-04-2016 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 Gene3D G3DSA:3.40.50.800 330 424 1.5E-19 T 20-04-2016 IPR004154 Anticodon-binding APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 426 58.897 T 20-04-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 Pfam PF03129 Anticodon binding domain 337 424 1.7E-13 T 20-04-2016 IPR004154 Anticodon-binding APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-17 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-17 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-17 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-17 T 20-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 Gene3D G3DSA:3.30.930.10 253 329 6.6E-87 T 20-04-2016 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 Gene3D G3DSA:3.30.930.10 8 204 6.6E-87 T 20-04-2016 APH_RS02705 b8efbd077b11eec0fb8c73a7a76c772f 426 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 226 1.1E-92 T 20-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 Pfam PF00561 alpha/beta hydrolase fold 27 141 8.8E-10 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 3.3E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.3E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.3E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 Gene3D G3DSA:3.40.50.1820 176 232 2.7E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 Gene3D G3DSA:3.40.50.1820 12 130 2.7E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 SUPERFAMILY SSF53474 162 232 1.1E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 SUPERFAMILY SSF53474 28 135 1.1E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00795 0f69e0672568c48d00ff3e1c008a7f3d 252 PANTHER PTHR16138 3 250 8.2E-73 T 20-04-2016 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 Hamap MF_00323 Ferrochelatase [hemH]. 3 320 29.493 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 ProSitePatterns PS00534 Ferrochelatase signature. 193 211 - T 20-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 SUPERFAMILY SSF53800 3 318 1.54E-82 T 20-04-2016 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 Gene3D G3DSA:3.40.50.1400 3 203 4.2E-51 T 20-04-2016 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 TIGRFAM TIGR00109 hemH: ferrochelatase 3 319 3.2E-73 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 Pfam PF00762 Ferrochelatase 4 318 3.3E-90 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 Gene3D G3DSA:3.40.50.1400 204 318 8.4E-31 T 20-04-2016 APH_RS01140 6da0e8050611ec7084dde6662c72efa0 320 PANTHER PTHR11108 1 317 3.5E-81 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APH_RS00095 59d972487e337dd85c3b03c71bf7711d 273 Pfam PF00510 Cytochrome c oxidase subunit III 5 272 1.6E-77 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APH_RS00095 59d972487e337dd85c3b03c71bf7711d 273 Gene3D G3DSA:1.10.287.70 2 66 4.4E-20 T 20-04-2016 APH_RS00095 59d972487e337dd85c3b03c71bf7711d 273 PANTHER PTHR11403:SF7 1 272 4.2E-98 T 20-04-2016 APH_RS00095 59d972487e337dd85c3b03c71bf7711d 273 PANTHER PTHR11403 1 272 4.2E-98 T 20-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APH_RS00095 59d972487e337dd85c3b03c71bf7711d 273 Gene3D G3DSA:1.20.120.80 74 271 5.5E-58 T 20-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APH_RS00095 59d972487e337dd85c3b03c71bf7711d 273 SUPERFAMILY SSF81452 2 271 1.15E-80 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APH_RS01660 466b3c3f322fcacb3876e6d7cbc8aabe 146 Pfam PF00692 dUTPase 15 145 5.5E-32 T 20-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APH_RS01660 466b3c3f322fcacb3876e6d7cbc8aabe 146 Gene3D G3DSA:2.70.40.10 9 146 8.9E-55 T 20-04-2016 IPR029054 dUTPase-like APH_RS01660 466b3c3f322fcacb3876e6d7cbc8aabe 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 145 1.3E-54 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APH_RS01660 466b3c3f322fcacb3876e6d7cbc8aabe 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 146 33.367 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APH_RS01660 466b3c3f322fcacb3876e6d7cbc8aabe 146 PANTHER PTHR11241 5 146 1.9E-53 T 20-04-2016 APH_RS01660 466b3c3f322fcacb3876e6d7cbc8aabe 146 SUPERFAMILY SSF51283 4 146 3.01E-51 T 20-04-2016 IPR029054 dUTPase-like APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.30.390.30 340 466 4.3E-40 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF55424 350 466 2.41E-35 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 2 140 1.8E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 2.7E-31 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PIRSF PIRSF000350 1 466 2.9E-74 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PANTHER PTHR22912 1 464 2.5E-179 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 5.5E-67 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 469 2.2E-154 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 1.2E-60 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 7.3E-37 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 7.3E-37 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.3E-37 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-37 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.3E-37 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 PANTHER PTHR22912:SF125 1 464 2.5E-179 T 20-04-2016 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF51905 1 336 3.79E-59 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS04245 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 141 335 1.5E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.30.390.30 340 466 4.3E-40 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF55424 350 466 2.41E-35 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 2 140 1.8E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 2.7E-31 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PIRSF PIRSF000350 1 466 2.9E-74 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PANTHER PTHR22912 1 464 2.5E-179 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 5.5E-67 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 469 2.2E-154 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 1.2E-60 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 7.3E-37 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 7.3E-37 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.3E-37 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-37 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.3E-37 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 PANTHER PTHR22912:SF125 1 464 2.5E-179 T 20-04-2016 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF51905 1 336 3.79E-59 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00305 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 141 335 1.5E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 Hamap MF_00165 Thymidylate kinase [tmk]. 1 206 25.5 T 20-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 Pfam PF02223 Thymidylate kinase 5 177 1.7E-43 T 20-04-2016 APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 Gene3D G3DSA:3.40.50.300 1 207 2.5E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 ProSitePatterns PS01331 Thymidylate kinase signature. 92 104 - T 20-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 PANTHER PTHR10344 1 178 1.9E-41 T 20-04-2016 APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 178 1.2E-48 T 20-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APH_RS00440 cf5e726667835bec6c0fb1d5434a31a6 219 SUPERFAMILY SSF52540 1 190 3.96E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05335 c90bcdd1228c92b373bf6479f61d8bd3 363 SUPERFAMILY SSF142695 187 342 1.29E-46 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APH_RS05335 c90bcdd1228c92b373bf6479f61d8bd3 363 PANTHER PTHR21327:SF6 118 361 5.1E-68 T 20-04-2016 APH_RS05335 c90bcdd1228c92b373bf6479f61d8bd3 363 Pfam PF00925 GTP cyclohydrolase II 186 339 1.1E-49 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APH_RS05335 c90bcdd1228c92b373bf6479f61d8bd3 363 PANTHER PTHR21327 118 361 5.1E-68 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Pfam PF14492 Elongation Factor G, domain II 389 462 7.0E-31 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 165 4.3E-32 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SUPERFAMILY SSF54211 464 584 8.34E-40 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PANTHER PTHR23115:SF66 1 162 0.0 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PANTHER PTHR23115:SF66 288 668 0.0 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PANTHER PTHR23115:SF66 239 267 0.0 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Pfam PF00679 Elongation factor G C-terminus 585 668 1.1E-28 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Gene3D G3DSA:3.40.50.300 1 271 1.1E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Gene3D G3DSA:3.30.230.10 469 584 2.4E-44 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 36 51 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Hamap MF_00054_B Elongation factor G [fusA]. 1 673 102.772 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Pfam PF00009 Elongation factor Tu GTP binding domain 1 266 2.6E-66 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SUPERFAMILY SSF54980 387 465 2.7E-22 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SUPERFAMILY SSF50447 249 389 2.52E-34 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 670 0.0 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PANTHER PTHR23115 1 162 0.0 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PANTHER PTHR23115 288 668 0.0 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PANTHER PTHR23115 239 267 0.0 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Gene3D G3DSA:3.30.70.870 391 465 1.0E-32 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Gene3D G3DSA:2.40.30.10 290 390 1.8E-34 T 20-04-2016 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SMART SM00838 585 673 6.8E-48 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SUPERFAMILY SSF54980 585 669 2.06E-27 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PRINTS PR00315 GTP-binding elongation factor signature 63 73 2.1E-9 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PRINTS PR00315 GTP-binding elongation factor signature 115 124 2.1E-9 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PRINTS PR00315 GTP-binding elongation factor signature 43 51 2.1E-9 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 PRINTS PR00315 GTP-binding elongation factor signature 79 90 2.1E-9 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Gene3D G3DSA:3.30.70.240 585 668 3.6E-30 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SMART SM00889 465 583 1.3E-60 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Pfam PF03764 Elongation factor G, domain IV 464 582 1.2E-40 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 Pfam PF03144 Elongation factor Tu domain 2 309 376 6.4E-12 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APH_RS04105 9a65f961f9ec4d352dc8761a873c8bd3 675 SUPERFAMILY SSF52540 1 266 6.86E-103 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 Pfam PF08245 Mur ligase middle domain 43 259 2.5E-10 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 SUPERFAMILY SSF53623 12 284 2.52E-85 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 PANTHER PTHR11136 17 427 1.6E-114 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 133 148 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 PIRSF PIRSF001563 5 428 2.2E-115 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 PANTHER PTHR11136:SF0 17 427 1.6E-114 T 20-04-2016 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 41 64 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 SUPERFAMILY SSF53244 303 427 8.47E-20 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 20 426 5.8E-115 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 Gene3D G3DSA:3.90.190.20 287 427 1.2E-24 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APH_RS03070 20782d8f1e6dd0f93f039d494d9b8339 429 Gene3D G3DSA:3.40.1190.10 16 285 1.2E-88 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 804 2.8E-247 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 SMART SM00534 608 795 3.0E-102 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:3.30.420.110 127 259 1.3E-32 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF05188 MutS domain II 129 256 5.0E-22 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:3.40.1170.10 3 121 8.4E-47 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF05190 MutS family domain IV 432 522 5.2E-19 T 20-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 PIRSF PIRSF037677 2 816 1.1E-167 T 20-04-2016 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:1.10.1420.10 268 469 2.0E-42 T 20-04-2016 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:3.40.50.300 570 798 1.1E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF01624 MutS domain I 8 120 3.6E-39 T 20-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF52540 570 798 1.33E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 PANTHER PTHR11361:SF86 2 812 0.0 T 20-04-2016 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 SMART SM00533 287 594 4.6E-83 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF48334 271 569 1.15E-76 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF55271 3 116 4.71E-39 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 PANTHER PTHR11361 2 812 0.0 T 20-04-2016 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF00488 MutS domain V 612 796 2.9E-76 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF53150 115 270 3.4E-37 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 820 21.801 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APH_RS03425 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF05192 MutS domain III 274 562 4.7E-35 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 PIRSF PIRSF006615 32 491 1.6E-67 T 20-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 PANTHER PTHR34217 1 491 2.1E-60 T 20-04-2016 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 148 488 5.7E-31 T 20-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 SUPERFAMILY SSF55486 1 489 4.03E-51 T 20-04-2016 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 395 416 2.9E-12 T 20-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 440 458 2.9E-12 T 20-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 372 389 2.9E-12 T 20-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APH_RS01475 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 326 345 2.9E-12 T 20-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APH_RS02555 a7d498d6e3a135f8df8366a7819d7f49 192 SUPERFAMILY SSF53067 2 102 7.12E-19 T 20-04-2016 APH_RS02555 a7d498d6e3a135f8df8366a7819d7f49 192 PANTHER PTHR11735:SF11 3 131 1.6E-17 T 20-04-2016 APH_RS02555 a7d498d6e3a135f8df8366a7819d7f49 192 Gene3D G3DSA:3.30.420.40 2 130 1.8E-24 T 20-04-2016 APH_RS02555 a7d498d6e3a135f8df8366a7819d7f49 192 PANTHER PTHR11735 3 131 1.6E-17 T 20-04-2016 APH_RS02555 a7d498d6e3a135f8df8366a7819d7f49 192 Pfam PF00814 Glycoprotease family 30 126 1.2E-15 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02555 a7d498d6e3a135f8df8366a7819d7f49 192 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 1 148 8.3E-35 T 20-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:1.10.720.10 23 69 5.7E-16 T 20-04-2016 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 443 206.353 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF68912 23 68 3.69E-8 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 PANTHER PTHR15184 185 442 2.7E-170 T 20-04-2016 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 PANTHER PTHR15184 1 168 2.7E-170 T 20-04-2016 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF07498 Rho termination factor, N-terminal domain 27 68 9.9E-12 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:3.40.50.300 153 441 7.6E-105 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 184 388 2.4E-27 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00382 195 375 8.1E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 TIGRFAM TIGR00767 rho: transcription termination factor Rho 25 442 6.7E-193 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 PANTHER PTHR15184:SF34 185 442 2.7E-170 T 20-04-2016 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 PANTHER PTHR15184:SF34 1 168 2.7E-170 T 20-04-2016 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:2.40.50.140 73 137 1.9E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF07497 Rho termination factor, RNA-binding domain 75 145 2.6E-25 T 20-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00357 74 140 2.4E-12 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF50249 73 144 2.68E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF52540 113 396 6.48E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04250 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00959 27 69 2.4E-11 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 SUPERFAMILY SSF54534 85 165 1.44E-17 T 20-04-2016 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 164 1.1E-26 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 Gene3D G3DSA:1.10.287.180 8 79 2.4E-29 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 Hamap MF_00105 Transcription elongation factor GreA [greA]. 7 164 27.804 T 20-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 Gene3D G3DSA:3.10.50.30 82 165 2.6E-24 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 SUPERFAMILY SSF46557 8 80 1.83E-25 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 22 52 - T 20-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 PIRSF PIRSF006092 5 165 4.4E-42 T 20-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 10 164 3.3E-50 T 20-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 PANTHER PTHR30437 9 165 7.7E-50 T 20-04-2016 APH_RS05420 ce40c80e97e7533c6fefe1477c79d405 166 Pfam PF03449 Transcription elongation factor, N-terminal 10 78 2.3E-28 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 SUPERFAMILY SSF53271 246 464 8.98E-66 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 Pfam PF13537 Glutamine amidotransferase domain 89 208 1.6E-22 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 SUPERFAMILY SSF56235 10 250 4.63E-65 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 PANTHER PTHR11907 8 462 6.5E-199 T 20-04-2016 APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 PIRSF PIRSF000485 6 467 2.8E-155 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 Pfam PF00156 Phosphoribosyl transferase domain 287 383 1.1E-10 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 PANTHER PTHR11907:SF0 8 462 6.5E-199 T 20-04-2016 APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 10 460 8.4E-142 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 Gene3D G3DSA:3.40.50.2020 267 437 3.6E-41 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 Gene3D G3DSA:3.60.20.10 10 254 3.8E-64 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APH_RS05265 ec401f5ed528e11dbb2f7d622cc7a41a 468 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 9 461 44.275 T 20-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APH_RS02180 726da839219a43e521689303f29b280e 198 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 1 196 24.751 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APH_RS02180 726da839219a43e521689303f29b280e 198 SUPERFAMILY SSF53335 17 198 2.79E-36 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02180 726da839219a43e521689303f29b280e 198 Pfam PF01728 FtsJ-like methyltransferase 18 196 1.0E-54 T 20-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APH_RS02180 726da839219a43e521689303f29b280e 198 PIRSF PIRSF005461 1 198 2.9E-66 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APH_RS02180 726da839219a43e521689303f29b280e 198 Gene3D G3DSA:3.40.50.150 1 197 8.9E-57 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02180 726da839219a43e521689303f29b280e 198 PANTHER PTHR10920 3 198 1.8E-75 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APH_RS02200 726da839219a43e521689303f29b280e 198 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 1 196 24.751 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APH_RS02200 726da839219a43e521689303f29b280e 198 SUPERFAMILY SSF53335 17 198 2.79E-36 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02200 726da839219a43e521689303f29b280e 198 Pfam PF01728 FtsJ-like methyltransferase 18 196 1.0E-54 T 20-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APH_RS02200 726da839219a43e521689303f29b280e 198 PIRSF PIRSF005461 1 198 2.9E-66 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APH_RS02200 726da839219a43e521689303f29b280e 198 Gene3D G3DSA:3.40.50.150 1 197 8.9E-57 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02200 726da839219a43e521689303f29b280e 198 PANTHER PTHR10920 3 198 1.8E-75 T 20-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 Gene3D G3DSA:1.10.275.10 2 137 2.6E-60 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 Pfam PF00206 Lyase 12 341 4.9E-110 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 2.57E-33 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 2.57E-33 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.57E-33 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 2.57E-33 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 Gene3D G3DSA:1.20.200.10 138 401 4.5E-105 T 20-04-2016 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 Pfam PF10415 Fumarase C C-terminus 407 459 2.1E-21 T 20-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 87.77 T 20-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 4.6E-224 T 20-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 Gene3D G3DSA:1.10.40.30 404 462 1.0E-27 T 20-04-2016 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 PANTHER PTHR11444 3 461 1.0E-252 T 20-04-2016 IPR000362 Fumarate lyase family APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 SUPERFAMILY SSF48557 4 460 4.12E-153 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APH_RS01085 3b4ac91727f9e053e0680c5d429da35c 462 PANTHER PTHR11444:SF1 3 461 1.0E-252 T 20-04-2016 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 5.0E-26 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.0E-26 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.0E-26 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 5.0E-26 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.0E-26 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 Gene3D G3DSA:3.40.50.720 2 163 4.5E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 Gene3D G3DSA:3.30.360.10 164 317 3.7E-57 T 20-04-2016 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 SUPERFAMILY SSF51735 3 180 1.37E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 315 9.0E-49 T 20-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PANTHER PTHR10836:SF50 2 334 1.1E-145 T 20-04-2016 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 5.3E-44 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 SMART SM00846 3 155 1.4E-65 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PANTHER PTHR10836 2 334 1.1E-145 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 SUPERFAMILY SSF55347 155 316 2.43E-55 T 20-04-2016 APH_RS05490 424d1456813b4c426ddf2abd9a7b5550 336 PIRSF PIRSF000149 1 335 1.0E-121 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 54 256 1.1E-67 T 20-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 Gene3D G3DSA:3.90.226.10 67 148 7.2E-47 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 Gene3D G3DSA:3.90.226.10 186 274 7.2E-47 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 SUPERFAMILY SSF52096 48 156 1.08E-39 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 SUPERFAMILY SSF52096 185 245 1.08E-39 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 Pfam PF01343 Peptidase family S49 110 259 2.5E-44 T 20-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APH_RS01180 75fd68fef70482eca41e4587cf50ba26 298 PANTHER PTHR33209 52 271 9.6E-70 T 20-04-2016 APH_RS01930 a2de0a9d26f6e6f89b2a1a4e7024fbca 201 PANTHER PTHR33269:SF1 1 179 2.0E-40 T 20-04-2016 APH_RS01930 a2de0a9d26f6e6f89b2a1a4e7024fbca 201 PANTHER PTHR33269 1 179 2.0E-40 T 20-04-2016 APH_RS01930 a2de0a9d26f6e6f89b2a1a4e7024fbca 201 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 162 4.0E-30 T 20-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 Gene3D G3DSA:3.30.830.10 222 411 1.2E-52 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 SUPERFAMILY SSF63411 222 410 1.75E-43 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 SUPERFAMILY SSF63411 7 206 1.26E-56 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 Pfam PF00675 Insulinase (Peptidase family M16) 16 161 6.9E-39 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 Gene3D G3DSA:3.30.830.10 7 206 1.4E-55 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 Pfam PF05193 Peptidase M16 inactive domain 168 341 1.1E-36 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 PANTHER PTHR11851 7 410 3.7E-123 T 20-04-2016 APH_RS00475 740cdd20843f2bf1291736c9ef137d65 423 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 20-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APH_RS04705 309d5f0cae094abb6cb6d77d47e1cfe6 225 PANTHER PTHR23427:SF2 18 220 3.4E-15 T 20-04-2016 APH_RS04705 309d5f0cae094abb6cb6d77d47e1cfe6 225 PANTHER PTHR23427 18 220 3.4E-15 T 20-04-2016 APH_RS04705 309d5f0cae094abb6cb6d77d47e1cfe6 225 Pfam PF02104 SURF1 family 15 200 7.0E-29 T 20-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 APH_RS00455 1c189070eba33dfb81f226ed3e6b10f9 215 PIRSF PIRSF031890 1 215 9.8E-60 T 20-04-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related APH_RS00455 1c189070eba33dfb81f226ed3e6b10f9 215 Pfam PF04280 Tim44-like domain 73 214 3.1E-33 T 20-04-2016 IPR007379 Tim44-like domain APH_RS00455 1c189070eba33dfb81f226ed3e6b10f9 215 SUPERFAMILY SSF54427 68 214 3.95E-39 T 20-04-2016 IPR032710 NTF2-like domain APH_RS00455 1c189070eba33dfb81f226ed3e6b10f9 215 ProDom PD111165 RP434 54 212 0.003 T 20-04-2016 APH_RS00455 1c189070eba33dfb81f226ed3e6b10f9 215 SMART SM00978 70 214 1.9E-34 T 20-04-2016 IPR007379 Tim44-like domain APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 PANTHER PTHR11851 50 431 3.2E-37 T 20-04-2016 APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 Pfam PF00675 Insulinase (Peptidase family M16) 61 179 6.7E-5 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 SUPERFAMILY SSF63411 30 233 5.33E-35 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 PANTHER PTHR11851:SF140 50 431 3.2E-37 T 20-04-2016 APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 Gene3D G3DSA:3.30.830.10 262 433 8.6E-22 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 Pfam PF05193 Peptidase M16 inactive domain 195 368 3.8E-18 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 Gene3D G3DSA:3.30.830.10 30 242 4.2E-30 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS04640 e171845b05b1fe5c90da33a34ae79a2c 463 SUPERFAMILY SSF63411 259 442 6.17E-31 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 SUPERFAMILY SSF55200 84 165 1.26E-26 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 83 165 2.9E-29 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 SUPERFAMILY SSF54364 5 73 8.63E-21 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 8 167 8.0E-45 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 8 73 1.3E-20 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 Gene3D G3DSA:3.10.20.80 3 75 4.1E-24 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 Gene3D G3DSA:3.30.110.10 78 167 1.6E-29 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APH_RS05100 bc253a4cc50754483537fbaf0eea7a26 172 PANTHER PTHR10938 1 164 2.7E-50 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 PANTHER PTHR22855 6 509 0.0 T 20-04-2016 APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 SUPERFAMILY SSF52096 223 509 1.23E-89 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 Gene3D G3DSA:3.90.226.10 7 251 3.0E-78 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 PANTHER PTHR22855:SF14 6 509 0.0 T 20-04-2016 APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 Gene3D G3DSA:3.90.226.10 254 509 5.4E-102 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 SUPERFAMILY SSF52096 6 251 7.96E-76 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS01840 e918510e24e1e2158b99b63fc5301e88 509 Pfam PF01039 Carboxyl transferase domain 27 507 1.2E-191 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APH_RS05150 a139bed61b31ad8f92c0ae0e2bd3c514 307 Pfam PF01617 Surface antigen 148 307 4.8E-51 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05150 a139bed61b31ad8f92c0ae0e2bd3c514 307 Gene3D G3DSA:2.40.160.20 165 307 1.3E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05150 a139bed61b31ad8f92c0ae0e2bd3c514 307 SUPERFAMILY SSF56925 185 307 1.12E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 SUPERFAMILY SSF46992 3 87 2.62E-23 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 PANTHER PTHR33398 1 91 2.4E-21 T 20-04-2016 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 86 14.845 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 7.1E-18 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 89 2.0E-12 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 Pfam PF01649 Ribosomal protein S20 2 85 1.2E-23 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05580 b3cdbb03623dda5244e0f596178f918c 96 Gene3D G3DSA:1.20.58.110 1 87 1.3E-25 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SUPERFAMILY SSF52172 148 289 9.25E-15 T 20-04-2016 IPR011006 CheY-like superfamily APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 451 4.2E-49 T 20-04-2016 IPR000160 GGDEF domain APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SUPERFAMILY SSF52172 4 133 3.13E-37 T 20-04-2016 IPR011006 CheY-like superfamily APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SMART SM00448 157 271 6.0E-4 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SMART SM00448 3 117 2.5E-38 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Pfam PF00072 Response regulator receiver domain 5 117 6.4E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Pfam PF00072 Response regulator receiver domain 159 272 1.8E-11 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SMART SM00267 284 454 1.3E-55 T 20-04-2016 IPR000160 GGDEF domain APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 448 5.3E-45 T 20-04-2016 IPR000160 GGDEF domain APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Gene3D G3DSA:3.40.50.2300 155 285 1.4E-17 T 20-04-2016 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Gene3D G3DSA:3.40.50.2300 3 124 2.4E-39 T 20-04-2016 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 PANTHER PTHR24423 4 160 4.9E-34 T 20-04-2016 APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SUPERFAMILY SSF55073 300 451 1.18E-46 T 20-04-2016 IPR029787 Nucleotide cyclase APH_RS02370 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Gene3D G3DSA:3.30.70.270 297 452 7.7E-52 T 20-04-2016 APH_RS04715 beb013823618fb35a62cf146aefdf8fb 262 Pfam PF00899 ThiF family 5 240 4.2E-65 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APH_RS04715 beb013823618fb35a62cf146aefdf8fb 262 PANTHER PTHR10953 4 244 8.1E-65 T 20-04-2016 APH_RS04715 beb013823618fb35a62cf146aefdf8fb 262 Gene3D G3DSA:3.40.50.720 2 241 5.1E-71 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS04715 beb013823618fb35a62cf146aefdf8fb 262 SUPERFAMILY SSF69572 3 242 6.15E-80 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APH_RS04715 beb013823618fb35a62cf146aefdf8fb 262 PANTHER PTHR10953:SF158 4 244 8.1E-65 T 20-04-2016 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 25.622 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 Gene3D G3DSA:2.40.50.100 20 83 3.2E-29 T 20-04-2016 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 20-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 TIGRFAM TIGR00062 L27: ribosomal protein bL27 2 81 8.0E-34 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 PANTHER PTHR15893 2 84 6.8E-40 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 SUPERFAMILY SSF110324 2 82 6.88E-32 T 20-04-2016 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 Pfam PF01016 Ribosomal L27 protein 2 81 1.0E-35 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-34 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-34 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-34 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02905 6435104682b134b10ab2753e65a55a26 91 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 83 2.0E-16 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 14 405 1.8E-144 T 20-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 Gene3D G3DSA:3.30.559.10 176 403 4.0E-89 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 PANTHER PTHR23151:SF47 1 406 9.5E-157 T 20-04-2016 APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 403 1.4E-81 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 SUPERFAMILY SSF51230 15 95 2.36E-17 T 20-04-2016 IPR011053 Single hybrid motif APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 Pfam PF00364 Biotin-requiring enzyme 14 78 4.0E-15 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 SUPERFAMILY SSF52777 176 404 2.09E-87 T 20-04-2016 APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 PANTHER PTHR23151 1 406 9.5E-157 T 20-04-2016 APH_RS04810 a07321a7575dda84ee5e3375100b3147 406 Gene3D G3DSA:2.40.50.100 14 82 1.1E-17 T 20-04-2016 APH_RS03535 7e20389e22f72c27cbb340bb1a49b5aa 165 PANTHER PTHR23508 24 145 4.3E-23 T 20-04-2016 APH_RS03535 7e20389e22f72c27cbb340bb1a49b5aa 165 PANTHER PTHR23508:SF17 24 145 4.3E-23 T 20-04-2016 APH_RS03535 7e20389e22f72c27cbb340bb1a49b5aa 165 Gene3D G3DSA:1.20.1250.20 19 155 1.9E-19 T 20-04-2016 APH_RS03535 7e20389e22f72c27cbb340bb1a49b5aa 165 SUPERFAMILY SSF103473 14 153 4.84E-21 T 20-04-2016 IPR020846 Major facilitator superfamily domain APH_RS03535 7e20389e22f72c27cbb340bb1a49b5aa 165 Pfam PF00083 Sugar (and other) transporter 16 148 3.9E-6 T 20-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 Gene3D G3DSA:3.40.50.300 3 162 3.5E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 229 362 3.6E-23 T 20-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 SUPERFAMILY SSF48019 241 358 4.76E-9 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 Gene3D G3DSA:1.10.8.60 163 239 3.0E-23 T 20-04-2016 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 SMART SM00382 34 176 2.6E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 Pfam PF13177 DNA polymerase III, delta subunit 18 174 4.0E-33 T 20-04-2016 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 349 3.7E-111 T 20-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 SUPERFAMILY SSF52540 32 224 7.98E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 PANTHER PTHR11669 3 364 1.2E-115 T 20-04-2016 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 PANTHER PTHR11669:SF0 3 364 1.2E-115 T 20-04-2016 APH_RS05485 a423b96eb7f2da35e5a1b4afa62fc347 456 Gene3D G3DSA:1.20.272.10 240 351 3.7E-5 T 20-04-2016 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 SUPERFAMILY SSF48163 300 462 3.01E-29 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 466 29.514 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 1.3E-91 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 SUPERFAMILY SSF52374 3 295 1.21E-97 T 20-04-2016 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:3.90.800.10 68 181 2.6E-28 T 20-04-2016 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:1.10.10.350 374 465 6.9E-16 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PANTHER PTHR11451 2 312 4.9E-87 T 20-04-2016 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.0E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:3.40.50.620 182 231 1.5E-48 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:3.40.50.620 3 67 1.5E-48 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 8.3E-145 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:1.10.1160.10 234 313 1.4E-26 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APH_RS01815 149032eef6f27f8ade70e0a7b10fcef8 468 PANTHER PTHR11451:SF41 2 312 4.9E-87 T 20-04-2016 APH_RS03685 b91dc99c250995ccc0d09a53e99f2d95 75 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 31 68 9.0E-12 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APH_RS03685 b91dc99c250995ccc0d09a53e99f2d95 75 SUPERFAMILY SSF47336 18 72 4.84E-14 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APH_RS03685 b91dc99c250995ccc0d09a53e99f2d95 75 Pfam PF00550 Phosphopantetheine attachment site 13 68 1.5E-10 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APH_RS03685 b91dc99c250995ccc0d09a53e99f2d95 75 PANTHER PTHR20863 12 75 1.0E-15 T 20-04-2016 APH_RS03685 b91dc99c250995ccc0d09a53e99f2d95 75 ProSitePatterns PS00012 Phosphopantetheine attachment site. 27 42 - T 20-04-2016 IPR006162 Phosphopantetheine attachment site APH_RS03685 b91dc99c250995ccc0d09a53e99f2d95 75 Gene3D G3DSA:1.10.1200.10 5 73 7.1E-22 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.60.260.20 261 340 2.5E-23 T 20-04-2016 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Pfam PF00684 DnaJ central domain 152 212 1.9E-9 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF49493 218 272 4.19E-17 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF49493 120 174 4.19E-17 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF57938 139 216 1.83E-17 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 357 9.8E-128 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.10.230.10 147 215 2.5E-17 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Pfam PF01556 DnaJ C terminal domain 126 340 2.5E-39 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF46565 2 109 1.57E-34 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 42 62 3.0E-30 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 62 81 3.0E-30 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 25 40 3.0E-30 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 7 25 3.0E-30 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 PANTHER PTHR24078:SF231 4 355 4.0E-131 T 20-04-2016 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 PANTHER PTHR24078 4 355 4.0E-131 T 20-04-2016 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 SMART SM00271 4 62 4.8E-31 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF49493 263 351 2.75E-22 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:1.10.287.110 3 108 7.2E-36 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Pfam PF00226 DnaJ domain 5 67 9.8E-28 T 20-04-2016 IPR001623 DnaJ domain APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.60.260.20 109 146 2.1E-15 T 20-04-2016 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.60.260.20 216 259 2.1E-15 T 20-04-2016 APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 20-04-2016 IPR018253 DnaJ domain, conserved site APH_RS00075 d98c1af6e0258fc4cee437c5385e80b2 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 39.05 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 SMART SM00028 89 122 3.3E-7 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 Gene3D G3DSA:3.40.50.150 146 326 1.1E-20 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 PANTHER PTHR10108:SF721 59 289 3.0E-14 T 20-04-2016 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 Gene3D G3DSA:1.25.40.10 60 129 2.8E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 Pfam PF08242 Methyltransferase domain 191 287 6.0E-14 T 20-04-2016 IPR013217 Methyltransferase type 12 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 SUPERFAMILY SSF48452 57 132 8.73E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 PANTHER PTHR10108 59 289 3.0E-14 T 20-04-2016 APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 SUPERFAMILY SSF53335 143 329 3.62E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS05345 8f71572dc3a089f6267e613b2b3bbb1c 353 Pfam PF00515 Tetratricopeptide repeat 89 122 1.4E-7 T 20-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 230 1.6E-80 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 20-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 PANTHER PTHR10108 4 231 9.2E-96 T 20-04-2016 APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 Pfam PF01209 ubiE/COQ5 methyltransferase family 4 230 1.6E-80 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 SUPERFAMILY SSF53335 6 229 2.3E-39 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 Gene3D G3DSA:3.40.50.150 6 230 1.1E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 PANTHER PTHR10108:SF24 4 231 9.2E-96 T 20-04-2016 APH_RS04265 bb1ae43e932b7d03eb88abb162b60efe 231 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 2 230 35.464 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APH_RS05290 c6a6b4c0eba15745a44198d560e6eeed 190 SUPERFAMILY SSF52833 6 183 1.01E-42 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS05290 c6a6b4c0eba15745a44198d560e6eeed 190 Pfam PF00578 AhpC/TSA family 15 132 1.1E-14 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APH_RS05290 c6a6b4c0eba15745a44198d560e6eeed 190 PANTHER PTHR10681 13 183 2.4E-40 T 20-04-2016 APH_RS05290 c6a6b4c0eba15745a44198d560e6eeed 190 PANTHER PTHR10681:SF91 13 183 2.4E-40 T 20-04-2016 APH_RS05290 c6a6b4c0eba15745a44198d560e6eeed 190 Gene3D G3DSA:3.40.30.10 15 159 3.6E-20 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS01160 9c69c4557a81ad9f16e06c4d30e4c961 113 Pfam PF13747 Domain of unknown function (DUF4164) 19 109 1.8E-11 T 20-04-2016 IPR025310 Protein of unknown function DUF4164 APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 9 365 3.5E-16 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 Gene3D G3DSA:3.40.50.300 12 176 3.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 Gene3D G3DSA:3.40.50.300 240 348 3.3E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 61.563 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 20-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 PANTHER PTHR32182:SF0 4 352 6.4E-21 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 SUPERFAMILY SSF52540 12 226 2.04E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 SUPERFAMILY SSF52540 268 354 2.04E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05740 2db69b587c74534f7568584cbf204d4c 371 PANTHER PTHR32182 4 352 6.4E-21 T 20-04-2016 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 PANTHER PTHR11846 4 427 8.6E-189 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 20-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 426 1.4E-144 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:3.90.170.10 266 423 1.2E-58 T 20-04-2016 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Pfam PF00709 Adenylosuccinate synthetase 4 422 1.1E-153 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 SMART SM00788 3 423 6.9E-238 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 434 177.235 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:1.10.300.10 103 194 2.7E-25 T 20-04-2016 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 SUPERFAMILY SSF52540 1 423 4.04E-154 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:3.40.440.10 2 93 1.5E-62 T 20-04-2016 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:3.40.440.10 195 256 1.5E-62 T 20-04-2016 APH_RS01460 86a13e90ebc01e2ecfcda61a0c94ff9d 434 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 20-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.40.50.300 620 700 1.5E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.40.50.300 829 950 1.5E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.40.50.300 489 607 1.0E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.40.50.300 3 53 1.0E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 SUPERFAMILY SSF52540 622 921 1.12E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.20.1580.10 702 828 4.0E-47 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.10.8.280 299 416 1.1E-11 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 ProSitePatterns PS00211 ABC transporters family signature. 838 852 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 PANTHER PTHR32282 2 953 0.0 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 932 0.0 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 PANTHER PTHR32282:SF2 2 953 0.0 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.20.1580.10 262 295 1.9E-47 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.20.1580.10 94 131 1.9E-47 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.20.1580.10 417 488 1.9E-47 T 20-04-2016 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 SUPERFAMILY SSF52540 457 580 4.1E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 SUPERFAMILY SSF52540 6 206 4.1E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.30.1490.20 202 239 8.1E-15 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS02305 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.30.1490.20 133 155 8.1E-15 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 PANTHER PTHR21499 12 235 1.9E-96 T 20-04-2016 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 Pfam PF00696 Amino acid kinase family 15 222 1.0E-25 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 Gene3D G3DSA:3.40.1160.10 10 243 6.4E-74 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 PANTHER PTHR21499:SF20 12 235 1.9E-96 T 20-04-2016 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 SUPERFAMILY SSF53633 12 243 6.81E-62 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 PIRSF PIRSF005650 8 244 1.1E-85 T 20-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 Hamap MF_01220_B Uridylate kinase [pyrH]. 11 243 41.375 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APH_RS00520 3313581f85a3e8cc3c1e6b6d4746c39d 244 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 13 242 3.7E-93 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Gene3D G3DSA:3.40.50.10050 625 702 7.7E-21 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 327 482 2.7E-34 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 241 823 4.2E-201 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 249 298 3.5E-9 T 20-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 SUPERFAMILY SSF52156 616 731 2.62E-31 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 SUPERFAMILY SSF50447 726 820 7.07E-24 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Pfam PF11987 Translation-initiation factor 2 613 713 1.1E-31 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 PANTHER PTHR23115 677 825 3.3E-175 T 20-04-2016 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 PANTHER PTHR23115 309 652 3.3E-175 T 20-04-2016 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 18 822 15.017 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Gene3D G3DSA:2.40.30.10 727 822 5.2E-25 T 20-04-2016 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Pfam PF00009 Elongation factor Tu GTP binding domain 329 485 2.2E-31 T 20-04-2016 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 SUPERFAMILY SSF50447 498 580 6.03E-23 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 SUPERFAMILY SSF52540 320 494 1.37E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 PANTHER PTHR23115:SF184 677 825 3.3E-175 T 20-04-2016 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 PANTHER PTHR23115:SF184 309 652 3.3E-175 T 20-04-2016 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 ProSitePatterns PS01176 Initiation factor 2 signature. 775 797 - T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Gene3D G3DSA:3.40.50.300 325 490 4.8E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01985 4f3eae7f6cc1aeb861f3a9842f8a307b 825 Gene3D G3DSA:2.40.30.10 498 589 1.5E-20 T 20-04-2016 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 SMART SM00840 348 410 3.9E-8 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 Gene3D G3DSA:3.40.50.620 22 310 4.4E-94 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02395 1718f04de1ae42629c1833df116999e9 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 461 36.708 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 318 2.1E-111 T 20-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 Gene3D G3DSA:1.20.120.640 312 398 3.1E-10 T 20-04-2016 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 SUPERFAMILY SSF52374 2 317 5.63E-85 T 20-04-2016 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 461 2.4E-144 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 1.7E-28 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 1.7E-28 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 1.7E-28 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 1.7E-28 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 Pfam PF09190 DALR domain 351 399 1.2E-9 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 SUPERFAMILY SSF47323 344 459 6.02E-25 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02395 1718f04de1ae42629c1833df116999e9 462 PANTHER PTHR10890 2 462 2.8E-177 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_RS02355 97545f35ab08ac10f565657add754315 188 PIRSF PIRSF005901 1 187 8.3E-61 T 20-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50249 129 186 6.17E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS02355 97545f35ab08ac10f565657add754315 188 PANTHER PTHR30053:SF1 4 187 1.8E-78 T 20-04-2016 APH_RS02355 97545f35ab08ac10f565657add754315 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 58 9.9E-21 T 20-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 20-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 SMART SM01185 68 122 1.1E-18 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 SMART SM00841 130 185 1.3E-25 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.30.30.30 5 64 2.9E-21 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APH_RS02355 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50249 66 127 9.42E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS02355 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.40.50.140 66 127 1.0E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS02355 97545f35ab08ac10f565657add754315 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 186 1.8E-65 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 PANTHER PTHR30053 4 187 1.8E-78 T 20-04-2016 APH_RS02355 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50104 6 63 8.42E-16 T 20-04-2016 IPR008991 Translation protein SH3-like domain APH_RS02355 97545f35ab08ac10f565657add754315 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 39.834 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 1.5E-16 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.2E-20 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APH_RS02355 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.40.50.140 130 186 1.4E-21 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 Pfam PF01617 Surface antigen 27 389 7.1E-71 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 SUPERFAMILY SSF56925 88 119 4.19E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 SUPERFAMILY SSF56925 308 381 4.19E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 SUPERFAMILY SSF56925 27 46 4.19E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 Gene3D G3DSA:2.40.160.20 308 377 4.0E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 Gene3D G3DSA:2.40.160.20 87 132 4.0E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05055 4f3a967aa893d167a3565342c4b95398 391 Gene3D G3DSA:2.40.160.20 29 45 4.0E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 PANTHER PTHR10804 6 257 2.0E-124 T 20-04-2016 APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 39.119 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 7.27E-21 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 7.27E-21 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 7.27E-21 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 7.27E-21 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 Gene3D G3DSA:3.90.230.10 5 258 1.4E-89 T 20-04-2016 IPR000994 Peptidase M24, structural domain APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 SUPERFAMILY SSF55920 6 259 3.4E-82 T 20-04-2016 IPR000994 Peptidase M24, structural domain APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 Pfam PF00557 Metallopeptidase family M24 15 245 3.3E-49 T 20-04-2016 IPR000994 Peptidase M24, structural domain APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 PANTHER PTHR10804:SF82 6 257 2.0E-124 T 20-04-2016 APH_RS04815 6ab87bdea01a6f1cf5e24fb0e367f002 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 6 252 7.9E-92 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APH_RS03670 efc0f5d37a3545ce806c3377201678b8 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 55 7.0E-20 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS03670 efc0f5d37a3545ce806c3377201678b8 56 PANTHER PTHR15238 3 56 2.7E-19 T 20-04-2016 APH_RS03670 efc0f5d37a3545ce806c3377201678b8 56 PANTHER PTHR15238:SF1 3 56 2.7E-19 T 20-04-2016 APH_RS03670 efc0f5d37a3545ce806c3377201678b8 56 Pfam PF00471 Ribosomal protein L33 10 54 3.3E-12 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS03670 efc0f5d37a3545ce806c3377201678b8 56 SUPERFAMILY SSF57829 3 54 2.2E-15 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APH_RS03670 efc0f5d37a3545ce806c3377201678b8 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 12.35 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 PANTHER PTHR11649 10 445 6.5E-154 T 20-04-2016 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Pfam PF12631 MnmE helical domain 124 442 4.2E-51 T 20-04-2016 IPR025867 MnmE, helical domain APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 SUPERFAMILY SSF52540 75 153 5.84E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 SUPERFAMILY SSF52540 189 366 5.84E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 445 2.1E-93 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Pfam PF01926 50S ribosome-binding GTPase 219 329 6.1E-20 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 339 3.5E-20 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 121 3.1E-35 T 20-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 SUPERFAMILY SSF116878 122 221 4.18E-46 T 20-04-2016 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 SUPERFAMILY SSF116878 374 445 4.18E-46 T 20-04-2016 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:3.40.50.300 217 247 8.2E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:3.30.1360.120 4 122 4.9E-40 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 445 30.548 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 PANTHER PTHR11649:SF56 10 445 6.5E-154 T 20-04-2016 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:1.20.120.430 379 445 2.7E-55 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:1.20.120.430 123 183 2.7E-55 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APH_RS05215 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:1.20.120.430 248 272 2.7E-55 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APH_RS02655 a713b82f068cd424a5350067881bfe0d 185 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 15 164 5.1E-13 T 20-04-2016 IPR011738 Phage conserved hypothetical protein APH_RS02655 a713b82f068cd424a5350067881bfe0d 185 Pfam PF05135 Phage gp6-like head-tail connector protein 20 126 7.3E-16 T 20-04-2016 IPR021146 Phage gp6-like head-tail connector protein APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 SMART SM00382 99 246 0.0023 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 SMART SM00963 1 86 2.9E-23 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 SMART SM00962 100 295 3.9E-97 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 SUPERFAMILY SSF52540 98 297 7.53E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 427 5.7E-154 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 SUPERFAMILY SSF47446 297 429 1.07E-38 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 Pfam PF00448 SRP54-type protein, GTPase domain 100 294 4.8E-65 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 Gene3D G3DSA:1.20.120.140 2 89 1.8E-24 T 20-04-2016 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 Pfam PF02978 Signal peptide binding domain 326 426 3.5E-28 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 Gene3D G3DSA:1.10.260.30 326 430 3.3E-33 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 Pfam PF02881 SRP54-type protein, helical bundle domain 5 80 2.7E-15 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 PANTHER PTHR11564:SF7 1 433 6.1E-190 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 SUPERFAMILY SSF47364 1 93 7.59E-21 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 Gene3D G3DSA:3.40.50.300 96 296 1.5E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS01530 f552dace81ea37152b34024afdbdd41a 449 PANTHER PTHR11564 1 433 6.1E-190 T 20-04-2016 APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 Pfam PF00227 Proteasome subunit 11 186 6.1E-19 T 20-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 Gene3D G3DSA:3.60.20.10 12 188 5.4E-80 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 PIRSF PIRSF039093 5 189 6.1E-82 T 20-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 187 38.435 T 20-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 SUPERFAMILY SSF56235 9 187 2.65E-53 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 187 2.7E-78 T 20-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APH_RS04255 6af490a73fe877fcb7a00a16828836bf 189 PANTHER PTHR32194 1 188 3.6E-105 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 17 1097 13.626 T 20-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 SUPERFAMILY SSF47323 697 950 7.66E-42 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 674 4.0E-188 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 600 609 8.9E-30 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 245 268 8.9E-30 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 55 66 8.9E-30 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 560 573 8.9E-30 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 425 440 8.9E-30 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 22 893 6.0E-259 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Gene3D G3DSA:3.90.740.10 246 430 1.8E-54 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 62 73 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 SUPERFAMILY SSF50677 216 427 1.67E-46 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PANTHER PTHR11946 10 266 0.0 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PANTHER PTHR11946 292 516 0.0 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PANTHER PTHR11946 534 987 0.0 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Pfam PF08264 Anticodon-binding domain of tRNA 731 885 1.0E-23 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Gene3D G3DSA:1.10.730.10 690 878 8.6E-42 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 SUPERFAMILY SSF52374 427 674 1.13E-127 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 SUPERFAMILY SSF52374 21 212 1.13E-127 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PANTHER PTHR11946:SF87 10 266 0.0 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PANTHER PTHR11946:SF87 292 516 0.0 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 PANTHER PTHR11946:SF87 534 987 0.0 T 20-04-2016 APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Gene3D G3DSA:3.40.50.620 23 208 2.3E-144 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS03225 8492b5be1147caa44ba22b954f2d907d 1108 Gene3D G3DSA:3.40.50.620 431 673 2.3E-144 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 122 3.3E-35 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 Pfam PF01196 Ribosomal protein L17 20 121 2.2E-28 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 SUPERFAMILY SSF64263 1 124 1.96E-40 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 PANTHER PTHR14413:SF5 1 129 9.0E-49 T 20-04-2016 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 PANTHER PTHR14413 1 129 9.0E-49 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 121 23.366 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01340 327d21e1c1f3e30dccc68b3031d2c3ff 132 Gene3D G3DSA:3.90.1030.10 1 122 2.7E-39 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 Gene3D G3DSA:3.30.1550.10 7 76 6.0E-20 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 SMART SM00649 10 146 3.4E-51 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 72 2.3E-16 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 ProSitePatterns PS00359 Ribosomal protein L11 signature. 132 147 - T 20-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 PANTHER PTHR11661:SF1 7 148 1.1E-42 T 20-04-2016 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 PANTHER PTHR11661 7 148 1.1E-42 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 Gene3D G3DSA:1.10.10.250 80 146 1.3E-26 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 7 146 5.5E-45 T 20-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 SUPERFAMILY SSF46906 74 146 2.22E-22 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 SUPERFAMILY SSF54747 7 77 2.88E-17 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 147 25.709 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APH_RS04080 da33d701ed80c6ee99d5af0590b15c64 148 Pfam PF00298 Ribosomal protein L11, RNA binding domain 80 145 1.1E-21 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PANTHER PTHR10422:SF18 1 517 2.0E-290 T 20-04-2016 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 13 517 1.2E-209 T 20-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 21 466 5.7E-144 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 190 209 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 12 37 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 346 364 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 111 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 129 141 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 161 179 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 241 262 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 424 445 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 374 393 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 59 82 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 287 302 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 332 3.73E-137 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 PANTHER PTHR10422 1 517 2.0E-290 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 243 297 - T 20-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 Gene3D G3DSA:1.20.210.10 25 487 8.6E-214 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04315 d975f4cf1d6375ce57654f0c6febc7b6 518 SUPERFAMILY SSF81442 9 517 1.83E-206 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04875 acd002cfeae127cfb0c9f3dc00c902f2 88 SUPERFAMILY SSF109910 6 82 8.76E-22 T 20-04-2016 IPR005631 Flavinator of succinate dehydrogenase APH_RS04875 acd002cfeae127cfb0c9f3dc00c902f2 88 PANTHER PTHR12469 10 81 3.8E-17 T 20-04-2016 APH_RS04875 acd002cfeae127cfb0c9f3dc00c902f2 88 Gene3D G3DSA:1.10.150.250 7 82 2.2E-23 T 20-04-2016 IPR005631 Flavinator of succinate dehydrogenase APH_RS04875 acd002cfeae127cfb0c9f3dc00c902f2 88 Pfam PF03937 Flavinator of succinate dehydrogenase 10 81 3.9E-21 T 20-04-2016 IPR005631 Flavinator of succinate dehydrogenase APH_RS04875 acd002cfeae127cfb0c9f3dc00c902f2 88 PANTHER PTHR12469:SF2 10 81 3.8E-17 T 20-04-2016 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 Gene3D G3DSA:3.20.20.70 1 207 7.9E-80 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 Pfam PF00834 Ribulose-phosphate 3 epimerase family 1 193 1.5E-70 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 PIRSF PIRSF001461 1 208 2.2E-80 T 20-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 PANTHER PTHR11749 1 207 1.9E-93 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 126 148 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 1 206 4.8E-78 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 PANTHER PTHR11749:SF3 1 207 1.9E-93 T 20-04-2016 APH_RS00010 da00139c0ae77c83833f6f5f249a0b34 208 SUPERFAMILY SSF51366 2 207 1.95E-64 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 Gene3D G3DSA:3.30.160.20 211 289 1.7E-35 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS01850 32b17c031167c44e6791cdabb5159557 359 Gene3D G3DSA:1.20.58.410 8 93 3.4E-6 T 20-04-2016 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 Pfam PF03462 PCRF domain 12 204 1.4E-63 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 SMART SM00937 64 179 1.1E-55 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 SUPERFAMILY SSF75620 11 354 1.01E-125 T 20-04-2016 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 PANTHER PTHR11075:SF9 12 357 1.8E-165 T 20-04-2016 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 7 357 8.4E-149 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 37.976 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 PANTHER PTHR11075 12 357 1.8E-165 T 20-04-2016 APH_RS01850 32b17c031167c44e6791cdabb5159557 359 Pfam PF00472 RF-1 domain 212 321 1.9E-42 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_RS03180 16f1d5be7d14d0c33e22850edf56236a 200 Pfam PF01300 Telomere recombination 8 180 3.7E-44 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APH_RS03180 16f1d5be7d14d0c33e22850edf56236a 200 PANTHER PTHR17490 1 193 6.1E-50 T 20-04-2016 APH_RS03180 16f1d5be7d14d0c33e22850edf56236a 200 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 2 182 1.2E-46 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APH_RS03180 16f1d5be7d14d0c33e22850edf56236a 200 SUPERFAMILY SSF55821 2 184 9.46E-47 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APH_RS03180 16f1d5be7d14d0c33e22850edf56236a 200 Gene3D G3DSA:3.90.870.10 2 187 7.5E-47 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APH_RS03570 8400c1400522a38a287e3935977165d0 635 PANTHER PTHR11070 3 626 1.1E-193 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APH_RS03570 8400c1400522a38a287e3935977165d0 635 Gene3D G3DSA:1.10.486.10 380 523 2.1E-39 T 20-04-2016 APH_RS03570 8400c1400522a38a287e3935977165d0 635 PANTHER PTHR11070:SF7 3 626 1.1E-193 T 20-04-2016 APH_RS03570 8400c1400522a38a287e3935977165d0 635 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 265 1.7E-70 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APH_RS03570 8400c1400522a38a287e3935977165d0 635 Gene3D G3DSA:3.40.50.300 534 628 3.6E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03570 8400c1400522a38a287e3935977165d0 635 Gene3D G3DSA:3.40.50.300 275 379 3.6E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03570 8400c1400522a38a287e3935977165d0 635 SUPERFAMILY SSF52540 2 626 1.18E-158 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03570 8400c1400522a38a287e3935977165d0 635 Pfam PF13361 UvrD-like helicase C-terminal domain 271 599 9.3E-66 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APH_RS03570 8400c1400522a38a287e3935977165d0 635 Gene3D G3DSA:3.40.50.300 3 270 4.7E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 3.5E-32 T 20-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF54292 28 129 2.49E-30 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 PANTHER PTHR11921 20 257 2.6E-153 T 20-04-2016 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 9.7E-9 T 20-04-2016 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 253 9.3E-84 T 20-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:3.10.20.30 23 129 2.6E-41 T 20-04-2016 IPR012675 Beta-grasp domain APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF46548 131 258 1.69E-38 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 PANTHER PTHR11921:SF29 20 257 2.6E-153 T 20-04-2016 APH_RS00720 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:1.10.1060.10 131 258 3.1E-48 T 20-04-2016 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 3.5E-32 T 20-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF54292 28 129 2.49E-30 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 PANTHER PTHR11921 20 257 2.6E-153 T 20-04-2016 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 9.7E-9 T 20-04-2016 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 253 9.3E-84 T 20-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:3.10.20.30 23 129 2.6E-41 T 20-04-2016 IPR012675 Beta-grasp domain APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF46548 131 258 1.69E-38 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 PANTHER PTHR11921:SF29 20 257 2.6E-153 T 20-04-2016 APH_RS00710 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:1.10.1060.10 131 258 3.1E-48 T 20-04-2016 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 Gene3D G3DSA:3.30.1140.32 107 205 7.8E-44 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 SUPERFAMILY SSF54821 106 205 9.29E-39 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.4E-38 T 20-04-2016 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 206 3.5E-88 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 SMART SM00322 59 124 2.1E-4 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 36.915 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 PANTHER PTHR11760 2 205 5.0E-113 T 20-04-2016 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 Gene3D G3DSA:3.30.300.20 17 106 2.1E-27 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 SUPERFAMILY SSF54814 2 105 2.25E-32 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 20-04-2016 IPR018280 Ribosomal protein S3, conserved site APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 PANTHER PTHR11760:SF19 2 205 5.0E-113 T 20-04-2016 APH_RS01250 8abec3e6627409e32079c37b0c9530c3 211 Pfam PF07650 KH domain 38 109 2.0E-18 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 257 262 7.2E-28 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 216 225 7.2E-28 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 294 7.2E-28 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 84 7.2E-28 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 7.2E-28 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 37 59 7.2E-28 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 300 33.968 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PANTHER PTHR11405 7 300 2.1E-100 T 20-04-2016 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PANTHER PTHR11405:SF16 7 300 2.1E-100 T 20-04-2016 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 SUPERFAMILY SSF53671 4 300 1.2E-82 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 297 1.1E-22 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 299 4.7E-80 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.5E-14 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.5E-14 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.5E-14 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 1.5E-14 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 Gene3D G3DSA:3.40.50.1370 139 277 1.4E-46 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 144 2.4E-32 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02195 41578aa2c8661e409d3b3f39d89a4712 300 Gene3D G3DSA:3.40.50.1370 4 138 5.2E-39 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_RS02810 cf28c4219d95b6114156b63351af45db 130 Gene3D G3DSA:3.90.1010.10 2 126 2.3E-48 T 20-04-2016 APH_RS02810 cf28c4219d95b6114156b63351af45db 130 PANTHER PTHR10093 14 126 5.1E-71 T 20-04-2016 APH_RS02810 cf28c4219d95b6114156b63351af45db 130 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 1.1E-60 T 20-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 APH_RS02810 cf28c4219d95b6114156b63351af45db 130 SUPERFAMILY SSF82649 2 125 2.88E-43 T 20-04-2016 APH_RS02810 cf28c4219d95b6114156b63351af45db 130 Pfam PF01592 NifU-like N terminal domain 3 126 1.2E-46 T 20-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APH_RS02420 091b6efee49f916d259b96e5dcd042d0 337 Gene3D G3DSA:3.40.50.150 59 159 7.6E-4 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02420 091b6efee49f916d259b96e5dcd042d0 337 Gene3D G3DSA:3.40.50.150 201 246 7.6E-4 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02420 091b6efee49f916d259b96e5dcd042d0 337 PANTHER PTHR12049 12 334 3.3E-84 T 20-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA APH_RS02420 091b6efee49f916d259b96e5dcd042d0 337 PANTHER PTHR12049:SF7 12 334 3.3E-84 T 20-04-2016 APH_RS02420 091b6efee49f916d259b96e5dcd042d0 337 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 56 281 3.6E-53 T 20-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA APH_RS02420 091b6efee49f916d259b96e5dcd042d0 337 SUPERFAMILY SSF53335 5 334 2.63E-100 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS00630 2c42d245c0739f4143b820f76147618f 78 SUPERFAMILY SSF82657 6 72 4.19E-18 T 20-04-2016 IPR002634 BolA protein APH_RS00630 2c42d245c0739f4143b820f76147618f 78 Pfam PF01722 BolA-like protein 28 71 2.2E-13 T 20-04-2016 IPR002634 BolA protein APH_RS00630 2c42d245c0739f4143b820f76147618f 78 PIRSF PIRSF003113 3 78 4.9E-17 T 20-04-2016 IPR002634 BolA protein APH_RS00630 2c42d245c0739f4143b820f76147618f 78 Gene3D G3DSA:3.30.300.90 7 72 1.6E-16 T 20-04-2016 IPR002634 BolA protein APH_RS05255 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF52540 518 659 4.11E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05255 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF52540 310 359 4.11E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05255 d40686d6eb771780ced2095205c91795 702 Pfam PF17191 RecG wedge domain 34 198 1.8E-9 T 20-04-2016 IPR033454 RecG, wedge domain APH_RS05255 d40686d6eb771780ced2095205c91795 702 SMART SM00487 282 470 7.7E-30 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_RS05255 d40686d6eb771780ced2095205c91795 702 Gene3D G3DSA:3.40.50.300 468 646 6.2E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05255 d40686d6eb771780ced2095205c91795 702 Pfam PF00271 Helicase conserved C-terminal domain 484 598 8.4E-17 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS05255 d40686d6eb771780ced2095205c91795 702 Gene3D G3DSA:3.40.50.300 273 464 1.1E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05255 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF50249 30 200 2.4E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS05255 d40686d6eb771780ced2095205c91795 702 PANTHER PTHR14025 262 651 1.1E-90 T 20-04-2016 APH_RS05255 d40686d6eb771780ced2095205c91795 702 PANTHER PTHR14025:SF21 262 651 1.1E-90 T 20-04-2016 APH_RS05255 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF52540 204 460 8.04E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05255 d40686d6eb771780ced2095205c91795 702 Gene3D G3DSA:2.40.50.140 79 162 2.1E-8 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS05255 d40686d6eb771780ced2095205c91795 702 SMART SM00490 515 599 1.4E-17 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS05255 d40686d6eb771780ced2095205c91795 702 Pfam PF00270 DEAD/DEAH box helicase 288 447 9.0E-18 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APH_RS04675 fd15b90cfdb2332d75ae0d5b6315e846 585 PANTHER PTHR30255:SF2 15 583 2.0E-179 T 20-04-2016 APH_RS04675 fd15b90cfdb2332d75ae0d5b6315e846 585 PANTHER PTHR30255 15 583 2.0E-179 T 20-04-2016 APH_RS04675 fd15b90cfdb2332d75ae0d5b6315e846 585 SUPERFAMILY SSF64182 69 465 9.81E-109 T 20-04-2016 APH_RS04675 fd15b90cfdb2332d75ae0d5b6315e846 585 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 40 582 1.8E-162 T 20-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APH_RS04675 fd15b90cfdb2332d75ae0d5b6315e846 585 Pfam PF01368 DHH family 95 221 1.1E-9 T 20-04-2016 IPR001667 DDH domain APH_RS04675 fd15b90cfdb2332d75ae0d5b6315e846 585 Pfam PF02272 DHHA1 domain 396 452 4.7E-8 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 SUPERFAMILY SSF117916 105 187 1.05E-24 T 20-04-2016 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 Gene3D G3DSA:3.30.1370.70 1 86 5.3E-29 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 PANTHER PTHR11178 1 188 3.8E-72 T 20-04-2016 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 87 4.5E-28 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 SUPERFAMILY SSF110836 1 87 3.66E-27 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 PIRSF PIRSF036773 1 188 2.3E-64 T 20-04-2016 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 PANTHER PTHR11178:SF1 1 188 3.8E-72 T 20-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 128 188 9.0E-27 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 Pfam PF01106 NifU-like domain 120 186 6.0E-25 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APH_RS00315 b36c4c5c800be360cc60d8f0be17fef4 188 SMART SM00932 3 90 7.6E-43 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 Gene3D G3DSA:1.25.40.10 35 109 9.5E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 Gene3D G3DSA:1.25.40.10 172 224 9.5E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 11 228 1.1E-57 T 20-04-2016 IPR017689 Outer membrane protein assembly factor BamD APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 SUPERFAMILY SSF48452 158 221 1.21E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 SUPERFAMILY SSF48452 33 106 1.21E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 PANTHER PTHR37423 1 222 3.2E-35 T 20-04-2016 APH_RS04325 727809e2c607029af50df7c96ac2ba55 233 Pfam PF13525 Outer membrane lipoprotein 34 222 1.2E-41 T 20-04-2016 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 PANTHER PTHR10359:SF18 1 205 6.7E-76 T 20-04-2016 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 Gene3D G3DSA:1.10.340.30 21 120 3.1E-31 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 185 201 2.8E-4 T 20-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 166 8.9E-20 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 Pfam PF00633 Helix-hairpin-helix motif 98 125 4.2E-6 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 Hamap MF_00942 Endonuclease III [nth]. 1 207 34.779 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 SUPERFAMILY SSF48150 5 203 1.73E-65 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 PIRSF PIRSF001435 1 206 5.1E-45 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 SMART SM00525 184 204 2.7E-5 T 20-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 SMART SM00478 36 183 6.5E-53 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 PANTHER PTHR10359 1 205 6.7E-76 T 20-04-2016 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 TIGRFAM TIGR01083 nth: endonuclease III 2 192 5.4E-76 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APH_RS03550 d919aeee619438bd9f2949823fbcc991 209 Gene3D G3DSA:1.10.1670.10 121 204 2.7E-31 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APH_RS00265 1050d42927636e7f99c87d4c86177601 236 Gene3D G3DSA:3.40.50.720 7 199 2.3E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00265 1050d42927636e7f99c87d4c86177601 236 Pfam PF00106 short chain dehydrogenase 9 190 1.1E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PANTHER PTHR24322 13 142 4.4E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PANTHER PTHR24322 158 191 4.4E-29 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 SUPERFAMILY SSF51735 8 200 1.04E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PANTHER PTHR24322:SF57 13 142 4.4E-29 T 20-04-2016 APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PANTHER PTHR24322:SF57 158 191 4.4E-29 T 20-04-2016 APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.7E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.7E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS00265 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.7E-6 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 Pfam PF00119 ATP synthase A chain 14 220 8.1E-48 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 71 87 2.9E-29 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 132 147 2.9E-29 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 206 221 2.9E-29 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 152 174 2.9E-29 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 ProSitePatterns PS00449 ATP synthase a subunit signature. 155 164 - T 20-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 Hamap MF_01393 ATP synthase subunit a [atpB]. 5 226 14.452 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 PANTHER PTHR11410 4 226 1.2E-62 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 8 222 1.0E-58 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 Gene3D G3DSA:1.20.120.220 67 226 4.9E-46 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS04785 0fa66a9fec9399febd26da88139bb0d0 226 SUPERFAMILY SSF81336 67 220 2.35E-42 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 SMART SM00437 250 516 5.5E-118 T 20-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF01131 DNA topoisomerase 132 553 4.8E-129 T 20-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:1.10.460.10 463 602 1.5E-55 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:1.10.460.10 139 186 1.5E-55 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 287 309 - T 20-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 718 51.371 T 20-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PANTHER PTHR11390 1 678 0.0 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 SMART SM00493 1 102 4.6E-27 T 20-04-2016 IPR006171 Toprim domain APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:2.70.20.10 326 462 2.5E-32 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:2.70.20.10 188 319 4.6E-32 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PANTHER PTHR11390:SF27 1 678 0.0 T 20-04-2016 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF01751 Toprim domain 3 116 1.3E-25 T 20-04-2016 IPR006171 Toprim domain APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 SMART SM00436 108 196 1.4E-45 T 20-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:3.40.50.140 3 137 1.3E-39 T 20-04-2016 IPR006171 Toprim domain APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 SUPERFAMILY SSF56712 2 567 6.8E-187 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 SUPERFAMILY SSF56712 598 607 6.8E-187 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 632 3.5E-242 T 20-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 7.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 479 493 7.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 7.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 7.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 7.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 598 631 6.0E-11 T 20-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 SUPERFAMILY SSF57783 598 633 8.67E-7 T 20-04-2016 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:3.30.65.10 603 633 5.9E-7 T 20-04-2016 APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF13368 Topoisomerase C-terminal repeat 707 758 2.1E-10 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat APH_RS02510 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF13368 Topoisomerase C-terminal repeat 766 811 5.6E-9 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat APH_RS02900 f36ff734a735ac61e782c08b9db5541f 99 PANTHER PTHR21349 1 99 4.7E-29 T 20-04-2016 APH_RS02900 f36ff734a735ac61e782c08b9db5541f 99 SUPERFAMILY SSF141091 1 98 6.02E-30 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APH_RS02900 f36ff734a735ac61e782c08b9db5541f 99 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 98 9.6E-23 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02900 f36ff734a735ac61e782c08b9db5541f 99 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 6.4E-32 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APH_RS02900 f36ff734a735ac61e782c08b9db5541f 99 ProSitePatterns PS01169 Ribosomal protein L21 signature. 69 91 - T 20-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02900 f36ff734a735ac61e782c08b9db5541f 99 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 20.561 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 SMART SM00411 5 94 1.5E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 20-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 Pfam PF00216 Bacterial DNA-binding protein 5 94 8.7E-21 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 SUPERFAMILY SSF47729 5 95 3.09E-21 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 PANTHER PTHR33175 5 97 4.2E-21 T 20-04-2016 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 Gene3D G3DSA:4.10.520.10 4 95 5.0E-20 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APH_RS05185 9ebfdbad680469b372d91b2e9f19ebf6 98 PANTHER PTHR33175:SF2 5 97 4.2E-21 T 20-04-2016 APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 PANTHER PTHR12532:SF0 1 245 1.1E-82 T 20-04-2016 APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.1270.10 82 135 3.9E-30 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.1270.10 218 244 3.9E-30 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 Pfam PF01709 Transcriptional regulator 5 239 2.0E-76 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.70.980 136 209 1.7E-13 T 20-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 241 2.5E-74 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:1.10.10.200 1 79 8.5E-32 T 20-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 PANTHER PTHR12532 1 245 1.1E-82 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 SUPERFAMILY SSF75625 3 244 4.71E-74 T 20-04-2016 IPR029072 YebC-like APH_RS02110 6f33547ea1b027a3da68af7b685d8f19 245 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 245 29.554 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APH_RS00035 5d8c2b93b8cd653b79e51691ea5da1fc 221 PANTHER PTHR10224:SF10 4 219 1.9E-68 T 20-04-2016 APH_RS00035 5d8c2b93b8cd653b79e51691ea5da1fc 221 PANTHER PTHR10224 4 219 1.9E-68 T 20-04-2016 APH_RS00035 5d8c2b93b8cd653b79e51691ea5da1fc 221 Gene3D G3DSA:3.40.50.880 1 219 3.9E-77 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS00035 5d8c2b93b8cd653b79e51691ea5da1fc 221 SUPERFAMILY SSF52317 1 214 5.35E-47 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS00035 5d8c2b93b8cd653b79e51691ea5da1fc 221 Pfam PF01965 DJ-1/PfpI family 14 153 2.2E-7 T 20-04-2016 IPR002818 DJ-1/PfpI APH_RS02470 f62886345063578ee66994ecd14b676d 830 SMART SM00387 545 674 1.1E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02470 f62886345063578ee66994ecd14b676d 830 SMART SM00448 707 820 6.3E-17 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS02470 f62886345063578ee66994ecd14b676d 830 Pfam PF00512 His Kinase A (phospho-acceptor) domain 440 502 6.1E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS02470 f62886345063578ee66994ecd14b676d 830 Gene3D G3DSA:1.10.287.130 433 500 8.5E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PANTHER PTHR24423:SF379 319 578 5.0E-125 T 20-04-2016 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PANTHER PTHR24423:SF379 595 824 5.0E-125 T 20-04-2016 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 671 6.2E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 617 6.2E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 631 6.2E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 652 6.2E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS02470 f62886345063578ee66994ecd14b676d 830 SMART SM00388 438 504 1.3E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PANTHER PTHR24423 319 578 5.0E-125 T 20-04-2016 APH_RS02470 f62886345063578ee66994ecd14b676d 830 PANTHER PTHR24423 595 824 5.0E-125 T 20-04-2016 APH_RS02470 f62886345063578ee66994ecd14b676d 830 SUPERFAMILY SSF52172 707 825 5.12E-26 T 20-04-2016 IPR011006 CheY-like superfamily APH_RS02470 f62886345063578ee66994ecd14b676d 830 SUPERFAMILY SSF55874 494 674 7.47E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02470 f62886345063578ee66994ecd14b676d 830 Gene3D G3DSA:3.30.565.10 504 671 2.2E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02470 f62886345063578ee66994ecd14b676d 830 SUPERFAMILY SSF47384 430 501 1.9E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS02470 f62886345063578ee66994ecd14b676d 830 Pfam PF00072 Response regulator receiver domain 709 820 4.6E-18 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS02470 f62886345063578ee66994ecd14b676d 830 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 671 3.4E-18 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02470 f62886345063578ee66994ecd14b676d 830 Gene3D G3DSA:3.40.50.2300 706 825 1.2E-28 T 20-04-2016 APH_RS02470 f62886345063578ee66994ecd14b676d 830 Gene3D G3DSA:3.30.450.20 318 432 4.4E-5 T 20-04-2016 APH_RS02710 22c829d1eeb7279d15ef76aeb327ce8b 336 Gene3D G3DSA:3.40.50.880 118 295 1.9E-11 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS02710 22c829d1eeb7279d15ef76aeb327ce8b 336 SUPERFAMILY SSF52317 83 295 2.04E-15 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 Hamap MF_00487 Malate dehydrogenase [mdh]. 7 318 38.874 T 20-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PANTHER PTHR11540 1 315 1.2E-122 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 Gene3D G3DSA:3.40.50.720 4 148 2.4E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PANTHER PTHR11540:SF16 1 315 1.2E-122 T 20-04-2016 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 1.1E-37 T 20-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 5.2E-28 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 5.2E-28 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 5.2E-28 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 5.2E-28 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 5.2E-28 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 PIRSF PIRSF000102 3 321 3.0E-101 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 SUPERFAMILY SSF56327 148 316 1.73E-50 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 SUPERFAMILY SSF51735 7 148 1.65E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 315 1.1E-26 T 20-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 Gene3D G3DSA:3.90.110.10 149 317 1.7E-52 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APH_RS02635 d6f2cfca2c2c4ddbef8650129993fd9b 321 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 7 316 9.4E-107 T 20-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 PANTHER PTHR30100:SF1 7 344 2.8E-110 T 20-04-2016 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 10 343 7.1E-93 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 Pfam PF02504 Fatty acid synthesis protein 10 330 4.9E-96 T 20-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 PANTHER PTHR30100 7 344 2.8E-110 T 20-04-2016 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 121.907 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 Gene3D G3DSA:3.40.718.10 8 343 4.8E-114 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 PIRSF PIRSF002465 7 345 2.1E-109 T 20-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APH_RS01390 0edf00cda7a46841ceab26fc976fb1b0 345 SUPERFAMILY SSF53659 10 343 2.3E-93 T 20-04-2016 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 6 165 40.525 T 20-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 51 159 8.6E-25 T 20-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 30 165 3.3E-76 T 20-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 PANTHER PTHR11995 21 167 3.2E-116 T 20-04-2016 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 132 148 - T 20-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 SUPERFAMILY SSF56770 28 167 1.44E-65 T 20-04-2016 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 Gene3D G3DSA:3.40.50.700 36 170 2.1E-33 T 20-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APH_RS02250 8ae8d0e989dd442ed6ec19900f3deb3d 174 PANTHER PTHR11995:SF19 21 167 3.2E-116 T 20-04-2016 APH_RS02265 60e0c95dfc3f4624df1f65cc2f2bc422 141 Pfam PF03100 CcmE 3 128 1.7E-36 T 20-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APH_RS02265 60e0c95dfc3f4624df1f65cc2f2bc422 141 Gene3D G3DSA:2.40.50.140 25 122 4.2E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS02265 60e0c95dfc3f4624df1f65cc2f2bc422 141 PANTHER PTHR34128 2 128 2.2E-34 T 20-04-2016 APH_RS02265 60e0c95dfc3f4624df1f65cc2f2bc422 141 PANTHER PTHR34128:SF1 2 128 2.2E-34 T 20-04-2016 APH_RS02265 60e0c95dfc3f4624df1f65cc2f2bc422 141 SUPERFAMILY SSF82093 29 131 4.97E-31 T 20-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APH_RS02265 60e0c95dfc3f4624df1f65cc2f2bc422 141 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 28.208 T 20-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APH_RS03930 0665f5b2aa4d89bbd1df6f2cb60df74d 260 Pfam PF08543 Phosphomethylpyrimidine kinase 8 249 6.2E-76 T 20-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APH_RS03930 0665f5b2aa4d89bbd1df6f2cb60df74d 260 Gene3D G3DSA:3.40.1190.20 1 252 7.6E-78 T 20-04-2016 IPR029056 Ribokinase-like APH_RS03930 0665f5b2aa4d89bbd1df6f2cb60df74d 260 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 1 252 1.7E-72 T 20-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APH_RS03930 0665f5b2aa4d89bbd1df6f2cb60df74d 260 PANTHER PTHR20858 1 254 1.5E-88 T 20-04-2016 APH_RS03930 0665f5b2aa4d89bbd1df6f2cb60df74d 260 SUPERFAMILY SSF53613 1 255 2.62E-63 T 20-04-2016 IPR029056 Ribokinase-like APH_RS03930 0665f5b2aa4d89bbd1df6f2cb60df74d 260 PANTHER PTHR20858:SF17 1 254 1.5E-88 T 20-04-2016 APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 17 263 7.2E-67 T 20-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 PANTHER PTHR30081 1 264 1.4E-51 T 20-04-2016 APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 Pfam PF02355 Protein export membrane protein 96 264 2.9E-55 T 20-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 Pfam PF07549 SecD/SecF GG Motif 12 35 5.0E-6 T 20-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 PRINTS PR01755 Bacterial translocase SecF protein signature 16 31 2.5E-26 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 PRINTS PR01755 Bacterial translocase SecF protein signature 179 197 2.5E-26 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 PRINTS PR01755 Bacterial translocase SecF protein signature 211 226 2.5E-26 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 PRINTS PR01755 Bacterial translocase SecF protein signature 131 145 2.5E-26 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 Gene3D G3DSA:1.20.1640.10 107 262 1.3E-27 T 20-04-2016 APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 96 260 6.6E-50 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 SUPERFAMILY SSF82866 120 263 7.46E-36 T 20-04-2016 APH_RS05390 13c925fbdb5c345d0612d5e2f6446f09 282 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 274 24.675 T 20-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 Pfam PF03054 tRNA methyl transferase 20 368 3.4E-110 T 20-04-2016 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 Gene3D G3DSA:3.40.50.620 16 223 9.7E-77 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS03595 469339e54f84978faf9c44a1c355e345 378 PANTHER PTHR11933 17 373 4.7E-137 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 SUPERFAMILY SSF52402 19 259 1.26E-49 T 20-04-2016 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 PANTHER PTHR11933:SF10 17 373 4.7E-137 T 20-04-2016 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 Gene3D G3DSA:2.40.30.10 290 372 7.3E-16 T 20-04-2016 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 20 368 2.1E-100 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 19 369 36.935 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APH_RS03595 469339e54f84978faf9c44a1c355e345 378 Gene3D G3DSA:2.30.30.280 232 286 8.1E-17 T 20-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:2.40.50.140 3 109 3.6E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF50249 4 109 1.03E-29 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Pfam PF02938 GAD domain 316 407 6.1E-14 T 20-04-2016 IPR029351 GAD domain APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 585 1.5E-180 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 1.1E-21 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.1E-21 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.1E-21 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 1.1E-21 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:3.30.930.10 139 284 4.1E-100 T 20-04-2016 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:3.30.930.10 418 586 4.1E-100 T 20-04-2016 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF55681 411 560 8.11E-94 T 20-04-2016 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF55681 124 319 8.11E-94 T 20-04-2016 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PANTHER PTHR22594:SF5 3 305 2.6E-203 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PANTHER PTHR22594:SF5 374 574 2.6E-203 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF55261 297 424 3.76E-31 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:3.30.1360.30 285 417 1.2E-38 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 561 8.0E-94 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Pfam PF01336 OB-fold nucleic acid binding domain 21 85 9.3E-12 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PANTHER PTHR22594 3 305 2.6E-203 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 PANTHER PTHR22594 374 574 2.6E-203 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00840 404a834130b0d162c64ad3bd61f7dceb 598 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 566 32.716 T 20-04-2016 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PANTHER PTHR11670:SF1 734 872 0.0 T 20-04-2016 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PANTHER PTHR11670:SF1 650 695 0.0 T 20-04-2016 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PANTHER PTHR11670:SF1 8 630 0.0 T 20-04-2016 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.30.499.10 364 553 2.4E-56 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 Pfam PF00330 Aconitase family (aconitate hydratase) 79 541 6.2E-168 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 SUPERFAMILY SSF52016 610 868 2.35E-75 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.30.499.10 31 245 1.1E-72 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 ProSitePatterns PS00450 Aconitase family signature 1. 406 422 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 Pfam PF00694 Aconitase C-terminal domain 675 802 1.0E-44 T 20-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 868 0.0 T 20-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 289 302 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 472 485 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 213 228 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 199 212 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 367 381 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 146 159 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 275 288 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 410 421 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 170 178 3.0E-39 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.20.19.10 616 868 2.9E-70 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 SUPERFAMILY SSF53732 5 604 1.2E-205 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.40.1060.10 246 362 2.0E-31 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 ProSitePatterns PS01244 Aconitase family signature 2. 472 485 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PANTHER PTHR11670 734 872 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PANTHER PTHR11670 650 695 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS04445 15468b5c5dc81cec6ae1846fb12cee98 873 PANTHER PTHR11670 8 630 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PANTHER PTHR11451:SF41 1 310 1.1E-66 T 20-04-2016 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:3.40.50.620 2 66 4.3E-45 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:3.40.50.620 181 230 4.3E-45 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:1.10.1160.10 235 313 2.5E-10 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 SUPERFAMILY SSF52374 2 296 7.24E-86 T 20-04-2016 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:3.90.800.10 67 180 4.8E-29 T 20-04-2016 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PANTHER PTHR11451 1 310 1.1E-66 T 20-04-2016 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 441 2.7E-103 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:1.10.10.350 364 443 1.0E-10 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 444 26.482 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 1.5E-22 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.5E-22 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 1.5E-22 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.5E-22 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 1.5E-22 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 272 4.8E-74 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 SUPERFAMILY SSF48163 281 441 6.8E-24 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS00340 471bad029d3742b325fd8b44f774e962 450 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 175 194 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 51 70 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 214 229 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 31 50 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 195 214 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 96 116 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 129 153 1.2E-60 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 Gene3D G3DSA:1.10.760.10 32 214 1.4E-77 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 Gene3D G3DSA:1.20.5.100 215 247 1.8E-6 T 20-04-2016 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PANTHER PTHR10266 33 245 2.5E-108 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 Pfam PF02167 Cytochrome C1 family 33 247 3.6E-95 T 20-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 SUPERFAMILY SSF46626 32 213 8.85E-64 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APH_RS01780 d5d264e1ef3b99fa4175cde213db40f2 250 PANTHER PTHR10266:SF3 33 245 2.5E-108 T 20-04-2016 APH_RS05470 0f9283adecdbe662f47c960443e082c5 233 PANTHER PTHR23291:SF42 15 233 1.1E-54 T 20-04-2016 APH_RS05470 0f9283adecdbe662f47c960443e082c5 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 229 2.6E-50 T 20-04-2016 APH_RS05470 0f9283adecdbe662f47c960443e082c5 233 PANTHER PTHR23291 15 233 1.1E-54 T 20-04-2016 IPR006214 Bax inhibitor 1-related APH_RS01755 562bc7333831750a4258afe49e391c09 287 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 52.833 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 1.2E-65 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:1.10.286.20 203 246 2.2E-14 T 20-04-2016 APH_RS01755 562bc7333831750a4258afe49e391c09 287 SUPERFAMILY SSF46934 1 54 1.63E-16 T 20-04-2016 IPR009060 UBA-like GO:0005515 APH_RS01755 562bc7333831750a4258afe49e391c09 287 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 20-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 Pfam PF00889 Elongation factor TS 70 285 1.1E-50 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 PANTHER PTHR11741 1 286 3.8E-91 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 SUPERFAMILY SSF54713 185 285 5.23E-39 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 SUPERFAMILY SSF54713 57 91 5.23E-39 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:3.30.479.20 247 286 1.1E-23 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:3.30.479.20 57 92 1.1E-23 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:3.30.479.20 186 201 1.1E-23 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APH_RS01755 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:1.10.8.10 1 54 2.1E-22 T 20-04-2016 APH_RS01230 333c592d4602e2aa022ab74e490c2d86 96 Pfam PF00276 Ribosomal protein L23 7 91 1.4E-18 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APH_RS01230 333c592d4602e2aa022ab74e490c2d86 96 Gene3D G3DSA:3.30.70.330 3 92 2.4E-20 T 20-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APH_RS01230 333c592d4602e2aa022ab74e490c2d86 96 SUPERFAMILY SSF54189 2 93 1.26E-20 T 20-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01230 333c592d4602e2aa022ab74e490c2d86 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 15.568 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APH_RS01370 4bb5e2b8689625fcd60fff8cd279e1b3 164 Pfam PF01613 Flavin reductase like domain 16 160 3.4E-36 T 20-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APH_RS01370 4bb5e2b8689625fcd60fff8cd279e1b3 164 PANTHER PTHR30466:SF1 6 164 3.2E-38 T 20-04-2016 APH_RS01370 4bb5e2b8689625fcd60fff8cd279e1b3 164 SMART SM00903 16 159 4.4E-52 T 20-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APH_RS01370 4bb5e2b8689625fcd60fff8cd279e1b3 164 SUPERFAMILY SSF50475 6 161 8.83E-45 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APH_RS01370 4bb5e2b8689625fcd60fff8cd279e1b3 164 PANTHER PTHR30466 6 164 3.2E-38 T 20-04-2016 APH_RS01370 4bb5e2b8689625fcd60fff8cd279e1b3 164 Gene3D G3DSA:2.30.110.10 9 163 1.3E-48 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APH_RS01575 8b98203948e03bf6e301c4e036ab1f32 103 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 58 4.8E-18 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01575 8b98203948e03bf6e301c4e036ab1f32 103 PANTHER PTHR13528 2 93 1.6E-27 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APH_RS01575 8b98203948e03bf6e301c4e036ab1f32 103 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 17.961 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01575 8b98203948e03bf6e301c4e036ab1f32 103 SUPERFAMILY SSF143800 2 76 7.85E-23 T 20-04-2016 APH_RS01575 8b98203948e03bf6e301c4e036ab1f32 103 Pfam PF00830 Ribosomal L28 family 3 60 3.3E-22 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APH_RS01575 8b98203948e03bf6e301c4e036ab1f32 103 Gene3D G3DSA:2.30.170.40 2 77 1.9E-27 T 20-04-2016 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 122 136 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 SMART SM00363 1 64 0.0011 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 Pfam PF00849 RNA pseudouridylate synthase 84 228 3.9E-32 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 SUPERFAMILY SSF55120 72 283 2.88E-50 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 Gene3D G3DSA:3.10.290.10 1 51 2.6E-5 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 PANTHER PTHR11079:SF74 1 290 3.7E-60 T 20-04-2016 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 PANTHER PTHR11079 1 290 3.7E-60 T 20-04-2016 APH_RS02365 0a489d45f0a763c8a75a310341ecd0db 297 SUPERFAMILY SSF55174 1 99 2.41E-5 T 20-04-2016 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 Pfam PF00579 tRNA synthetases class I (W and Y) 2 282 1.1E-72 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 Gene3D G3DSA:3.40.50.620 2 205 1.3E-82 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 Gene3D G3DSA:1.10.240.10 206 323 4.4E-17 T 20-04-2016 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 PANTHER PTHR10055:SF10 1 331 7.2E-163 T 20-04-2016 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 328 8.8E-95 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 SUPERFAMILY SSF52374 1 328 8.44E-89 T 20-04-2016 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 18 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 5.0E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 5.0E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 5.0E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 5.0E-28 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 329 37.501 T 20-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 APH_RS00160 94fb703b3a9aa70aec020d373a8092e5 331 PANTHER PTHR10055 1 331 7.2E-163 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 Gene3D G3DSA:3.90.1150.10 386 508 1.3E-30 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 SUPERFAMILY SSF53383 149 511 1.58E-75 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 Gene3D G3DSA:3.40.640.10 169 385 8.4E-58 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 Pfam PF02082 Transcriptional regulator 3 84 2.9E-14 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 Pfam PF00266 Aminotransferase class-V 151 502 3.0E-51 T 20-04-2016 IPR000192 Aminotransferase class V domain APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 PANTHER PTHR11601 151 505 2.0E-94 T 20-04-2016 APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 PANTHER PTHR11601:SF20 151 505 2.0E-94 T 20-04-2016 APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 Gene3D G3DSA:1.10.10.10 3 141 1.8E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 136 1.1E-24 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APH_RS02800 960c78ab9d177c615be9b3cd2086be0a 518 SUPERFAMILY SSF46785 3 139 2.36E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS00640 ea8168f43d15b6ec312ce3c5a9543070 261 SUPERFAMILY SSF56925 140 222 7.85E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00640 ea8168f43d15b6ec312ce3c5a9543070 261 Gene3D G3DSA:2.40.160.20 140 215 3.1E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00640 ea8168f43d15b6ec312ce3c5a9543070 261 Pfam PF01617 Surface antigen 113 261 6.2E-39 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 341 1.2E-33 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF55326 4 167 1.11E-44 T 20-04-2016 APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 PANTHER PTHR10520 4 339 7.2E-179 T 20-04-2016 APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.30.1330.10 18 168 7.8E-56 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.90.650.10 174 342 1.5E-59 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 344 41.598 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF56042 174 342 1.79E-54 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 162 1.6E-15 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 334 1.5E-121 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS00880 e17b56fcdbeb9f9a25e3006b30a60662 344 PANTHER PTHR10520:SF10 4 339 7.2E-179 T 20-04-2016 APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 341 1.2E-33 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF55326 4 167 1.11E-44 T 20-04-2016 APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 PANTHER PTHR10520 4 339 7.2E-179 T 20-04-2016 APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.30.1330.10 18 168 7.8E-56 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.90.650.10 174 342 1.5E-59 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 344 41.598 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF56042 174 342 1.79E-54 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 162 1.6E-15 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 334 1.5E-121 T 20-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS00920 e17b56fcdbeb9f9a25e3006b30a60662 344 PANTHER PTHR10520:SF10 4 339 7.2E-179 T 20-04-2016 APH_RS04795 f94a007ca3b15cb22cfd1b8eb2196b67 239 Pfam PF01617 Surface antigen 155 224 1.4E-18 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04795 f94a007ca3b15cb22cfd1b8eb2196b67 239 Gene3D G3DSA:2.40.160.20 182 220 1.2E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02460 28c1a611055c3f3670909ae8916c47a4 275 Pfam PF00675 Insulinase (Peptidase family M16) 127 245 2.3E-5 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APH_RS02460 28c1a611055c3f3670909ae8916c47a4 275 PANTHER PTHR11851:SF140 116 271 4.0E-14 T 20-04-2016 APH_RS02460 28c1a611055c3f3670909ae8916c47a4 275 SUPERFAMILY SSF63411 96 269 1.66E-27 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS02460 28c1a611055c3f3670909ae8916c47a4 275 Gene3D G3DSA:3.30.830.10 96 273 9.6E-23 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS02460 28c1a611055c3f3670909ae8916c47a4 275 PANTHER PTHR11851 116 271 4.0E-14 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 Pfam PF07549 SecD/SecF GG Motif 32 54 2.6E-5 T 20-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APH_RS05545 22884285e1172045d41bd24889923a88 508 PANTHER PTHR30081:SF1 219 490 2.1E-116 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 PANTHER PTHR30081:SF1 134 192 2.1E-116 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 PANTHER PTHR30081:SF1 38 89 2.1E-116 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 SUPERFAMILY SSF82866 298 489 2.75E-39 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 251 481 1.7E-72 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_RS05545 22884285e1172045d41bd24889923a88 508 Gene3D G3DSA:1.20.1640.10 297 489 1.4E-25 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.8E-5 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS05545 22884285e1172045d41bd24889923a88 508 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 5.8E-5 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS05545 22884285e1172045d41bd24889923a88 508 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.8E-5 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APH_RS05545 22884285e1172045d41bd24889923a88 508 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 488 8.6E-123 T 20-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APH_RS05545 22884285e1172045d41bd24889923a88 508 Pfam PF02355 Protein export membrane protein 322 487 1.2E-18 T 20-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APH_RS05545 22884285e1172045d41bd24889923a88 508 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 504 38.686 T 20-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APH_RS05545 22884285e1172045d41bd24889923a88 508 PANTHER PTHR30081 219 490 2.1E-116 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 PANTHER PTHR30081 134 192 2.1E-116 T 20-04-2016 APH_RS05545 22884285e1172045d41bd24889923a88 508 PANTHER PTHR30081 38 89 2.1E-116 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50156 256 379 3.15E-25 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.30.42.10 413 478 3.1E-12 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.40.10.10 41 173 2.4E-33 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.40.10.10 174 286 5.6E-40 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PANTHER PTHR22939 93 380 1.2E-108 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PANTHER PTHR22939 25 62 1.2E-108 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 SMART SM00228 285 367 2.0E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 SMART SM00228 398 478 9.4E-8 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50494 42 63 9.9E-60 T 20-04-2016 IPR009003 Peptidase S1, PA clan APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50494 100 281 9.9E-60 T 20-04-2016 IPR009003 Peptidase S1, PA clan APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50156 393 483 1.97E-11 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PANTHER PTHR22939:SF79 25 62 1.2E-108 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.30.42.10 287 381 1.1E-29 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 42 480 1.8E-135 T 20-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 5.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 5.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 5.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 5.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 5.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 5.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 394 474 2.1E-6 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Pfam PF13180 PDZ domain 286 375 1.7E-16 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 PANTHER PTHR22939:SF79 93 380 1.2E-108 T 20-04-2016 APH_RS04590 026e3977af52cb6fc26367144880f3a5 490 Pfam PF13365 Trypsin-like peptidase domain 111 245 1.2E-34 T 20-04-2016 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Pfam PF00472 RF-1 domain 185 218 1.0E-12 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 SMART SM00937 37 151 5.3E-43 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Gene3D G3DSA:1.20.58.410 3 67 2.7E-10 T 20-04-2016 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 201 217 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Pfam PF03462 PCRF domain 3 176 1.0E-47 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 PANTHER PTHR11075:SF6 3 218 8.7E-85 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Gene3D G3DSA:3.30.160.20 184 218 3.5E-14 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 PANTHER PTHR11075 3 218 8.7E-85 T 20-04-2016 APH_RS02060 2fd3cfa6f230a9ad2de9c811771d8bc2 226 SUPERFAMILY SSF75620 3 218 5.49E-70 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 33 362 2.3E-140 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03145 680d704939c5eab500d124c49b348765 369 Pfam PF06723 MreB/Mbl protein 34 361 1.6E-132 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03145 680d704939c5eab500d124c49b348765 369 Gene3D G3DSA:3.30.420.40 34 183 2.1E-40 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 PANTHER PTHR19375:SF117 33 352 3.5E-142 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 SUPERFAMILY SSF53067 34 170 7.38E-37 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 Gene3D G3DSA:3.30.420.40 289 343 8.0E-30 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 Gene3D G3DSA:3.30.420.40 184 210 8.0E-30 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 Gene3D G3DSA:3.90.640.10 211 284 2.5E-25 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 PANTHER PTHR19375 33 352 3.5E-142 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 SUPERFAMILY SSF53067 173 359 2.69E-44 T 20-04-2016 APH_RS03145 680d704939c5eab500d124c49b348765 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 91 1.4E-50 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03145 680d704939c5eab500d124c49b348765 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 326 352 1.4E-50 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03145 680d704939c5eab500d124c49b348765 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 211 231 1.4E-50 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03145 680d704939c5eab500d124c49b348765 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 156 175 1.4E-50 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03145 680d704939c5eab500d124c49b348765 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 93 116 1.4E-50 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 Gene3D G3DSA:3.40.250.10 101 226 9.4E-38 T 20-04-2016 IPR001763 Rhodanese-like domain APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 PANTHER PTHR22778 4 256 9.3E-75 T 20-04-2016 APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 Pfam PF00581 Rhodanese-like domain 118 208 1.7E-9 T 20-04-2016 IPR001763 Rhodanese-like domain APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 254 39.107 T 20-04-2016 IPR020936 Uncharacterised protein family UPF0176 APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 SUPERFAMILY SSF52821 92 238 9.6E-28 T 20-04-2016 IPR001763 Rhodanese-like domain APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 SMART SM00450 112 214 3.3E-17 T 20-04-2016 IPR001763 Rhodanese-like domain APH_RS03795 d4c37885005624ab797ff3cf11b7b570 275 PANTHER PTHR22778:SF12 4 256 9.3E-75 T 20-04-2016 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 SUPERFAMILY SSF50129 1 92 7.77E-26 T 20-04-2016 IPR011032 GroES-like APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 Pfam PF00166 Chaperonin 10 Kd subunit 3 92 4.5E-28 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 Gene3D G3DSA:2.30.33.40 1 92 6.3E-29 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 PANTHER PTHR10772:SF0 1 91 2.0E-27 T 20-04-2016 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 PANTHER PTHR10772 1 91 2.0E-27 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 24 45 1.5E-22 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.5E-22 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.5E-22 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 3 18 1.5E-22 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 SMART SM00883 2 93 2.3E-37 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS01060 ea7c669fb157884745d4d66b209cae3a 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 19.862 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_RS02235 520cf81dad01c0275ba9581c86f48bbe 111 Pfam PF13744 Helix-turn-helix domain 11 77 4.3E-17 T 20-04-2016 APH_RS02235 520cf81dad01c0275ba9581c86f48bbe 111 SUPERFAMILY SSF47413 11 81 5.63E-18 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APH_RS02235 520cf81dad01c0275ba9581c86f48bbe 111 Gene3D G3DSA:1.10.260.40 10 68 3.0E-22 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APH_RS04050 4f3a78bcef15231d2432265fe953a431 210 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 31.723 T 20-04-2016 IPR022898 Ribonuclease HII GO:0004523 APH_RS04050 4f3a78bcef15231d2432265fe953a431 210 Gene3D G3DSA:3.30.420.10 17 159 3.8E-40 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS04050 4f3a78bcef15231d2432265fe953a431 210 SUPERFAMILY SSF53098 9 202 4.25E-61 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS04050 4f3a78bcef15231d2432265fe953a431 210 Pfam PF01351 Ribonuclease HII 19 197 2.6E-37 T 20-04-2016 IPR024567 Ribonuclease HII/HIII domain APH_RS04050 4f3a78bcef15231d2432265fe953a431 210 PANTHER PTHR10954 14 202 9.3E-57 T 20-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 601 5.5E-244 T 20-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 SUPERFAMILY SSF46977 458 601 1.7E-48 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 SUPERFAMILY SSF51905 5 266 1.95E-75 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 SUPERFAMILY SSF51905 365 435 1.95E-75 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 SUPERFAMILY SSF56425 243 361 5.68E-43 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 PANTHER PTHR11632:SF51 6 596 0.0 T 20-04-2016 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Gene3D G3DSA:3.90.700.10 250 355 3.1E-44 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 20-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 PANTHER PTHR11632 6 596 0.0 T 20-04-2016 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Gene3D G3DSA:3.50.50.60 357 430 2.3E-121 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Gene3D G3DSA:3.50.50.60 4 249 2.3E-121 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 PIRSF PIRSF000171 4 591 1.2E-38 T 20-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Gene3D G3DSA:4.10.80.40 547 601 1.2E-28 T 20-04-2016 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Gene3D G3DSA:1.20.58.100 441 546 4.2E-37 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 601 1.6E-290 T 20-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Pfam PF00890 FAD binding domain 14 412 2.1E-120 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APH_RS00715 010272bcceac4d4dd43b29aa5bc28419 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 467 601 7.3E-44 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APH_RS05675 6e832296e0a74dfc6ebbbbcb2a50625a 202 Pfam PF05494 MlaC protein 56 200 7.0E-24 T 20-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APH_RS05675 6e832296e0a74dfc6ebbbbcb2a50625a 202 Gene3D G3DSA:1.10.10.640 175 200 4.1E-15 T 20-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APH_RS05675 6e832296e0a74dfc6ebbbbcb2a50625a 202 Gene3D G3DSA:1.10.10.640 75 116 4.1E-15 T 20-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 PANTHER PTHR30270:SF0 1 315 2.4E-86 T 20-04-2016 APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 PANTHER PTHR30270 1 315 2.4E-86 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 315 1.7E-82 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 Gene3D G3DSA:3.30.1330.10 1 135 2.6E-31 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 SUPERFAMILY SSF56042 140 302 2.69E-34 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 Gene3D G3DSA:3.90.650.10 142 315 2.2E-39 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 PIRSF PIRSF005303 1 316 1.2E-81 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 SUPERFAMILY SSF55326 2 135 1.33E-26 T 20-04-2016 APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 299 1.1E-7 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 313 27.214 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APH_RS03025 2b15c5100818197c9f85de0b8d94ec8d 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 24 135 7.9E-19 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS04350 f4d48653abe27392ed428519f8f60b6a 104 Pfam PF02272 DHHA1 domain 30 84 4.0E-5 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 SMART SM00650 22 194 1.3E-53 T 20-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 PANTHER PTHR11727 9 266 7.9E-81 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 261 1.6E-53 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 Gene3D G3DSA:1.10.8.100 200 262 1.3E-18 T 20-04-2016 IPR023165 rRNA adenine dimethylase-like APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 261 1.1E-73 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 38 66 - T 20-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 6 262 48.377 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 Gene3D G3DSA:3.40.50.150 5 192 2.9E-60 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02600 99b252d4789c25e9e393ec62a82fcc8f 269 SUPERFAMILY SSF53335 6 262 1.1E-68 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 Gene3D G3DSA:3.30.470.20 96 237 8.2E-48 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 Pfam PF08442 ATP-grasp domain 2 203 6.1E-68 T 20-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 383 2.0E-147 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 37.466 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 SUPERFAMILY SSF52210 240 384 5.1E-50 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 PANTHER PTHR11815:SF1 2 385 1.7E-190 T 20-04-2016 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 PANTHER PTHR11815 2 385 1.7E-190 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 Gene3D G3DSA:3.40.50.261 241 383 3.0E-61 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 Gene3D G3DSA:3.30.1490.20 21 95 6.5E-27 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 20-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 PIRSF PIRSF001554 1 387 1.3E-136 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 SUPERFAMILY SSF56059 2 236 1.06E-69 T 20-04-2016 APH_RS04175 7892beeee86dc11b653bc1bd1fd64079 388 Pfam PF00549 CoA-ligase 262 379 1.3E-18 T 20-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 41 0.008 T 20-04-2016 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 SUPERFAMILY SSF57840 6 41 5.36E-13 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 PANTHER PTHR18804:SF11 2 41 2.5E-13 T 20-04-2016 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.4E-8 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 PANTHER PTHR18804 2 41 2.5E-13 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 Pfam PF00444 Ribosomal protein L36 2 41 1.4E-16 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02215 0f152e03cca60ae9a2c131a286665a76 42 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.367 T 20-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 SUPERFAMILY SSF103473 8 393 1.44E-57 T 20-04-2016 IPR020846 Major facilitator superfamily domain APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 Gene3D G3DSA:1.20.1250.20 209 393 7.8E-7 T 20-04-2016 APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 Gene3D G3DSA:1.20.1250.20 10 193 1.9E-28 T 20-04-2016 APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 Pfam PF07690 Major Facilitator Superfamily 14 355 4.9E-35 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 PANTHER PTHR23502:SF19 5 403 2.5E-70 T 20-04-2016 APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 387 1.7E-63 T 20-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APH_RS00730 82f76648c93a5b51cfcaadaffe4bc5e9 403 PANTHER PTHR23502 5 403 2.5E-70 T 20-04-2016 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PRINTS PR00059 Ribosomal protein L6 signature 101 117 4.7E-20 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PRINTS PR00059 Ribosomal protein L6 signature 73 98 4.7E-20 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PRINTS PR00059 Ribosomal protein L6 signature 143 164 4.7E-20 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 SUPERFAMILY SSF56053 85 177 1.18E-28 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PIRSF PIRSF002162 1 180 7.0E-34 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Gene3D G3DSA:3.90.930.12 87 179 2.4E-29 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 7.5E-58 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PANTHER PTHR11655:SF14 2 180 8.4E-46 T 20-04-2016 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 SUPERFAMILY SSF56053 2 84 1.25E-13 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Gene3D G3DSA:3.90.930.12 2 84 3.0E-16 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PANTHER PTHR11655 2 180 8.4E-46 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Pfam PF00347 Ribosomal protein L6 93 164 5.2E-12 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS01295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Pfam PF00347 Ribosomal protein L6 11 80 2.6E-5 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 PANTHER PTHR10108:SF910 2 230 1.4E-70 T 20-04-2016 APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 235 36.999 T 20-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 SUPERFAMILY SSF53335 12 234 1.98E-43 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 Gene3D G3DSA:3.40.50.150 20 231 4.8E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 229 3.1E-78 T 20-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 PANTHER PTHR10108 2 230 1.4E-70 T 20-04-2016 APH_RS02535 c5ee9c70e720ae854e53f3398a5adc21 236 Pfam PF13489 Methyltransferase domain 39 159 1.0E-22 T 20-04-2016 APH_RS00395 6da37ee417fa181292482f435ad81069 292 PANTHER PTHR10992 220 285 5.3E-27 T 20-04-2016 APH_RS00395 6da37ee417fa181292482f435ad81069 292 PANTHER PTHR10992 4 200 5.3E-27 T 20-04-2016 APH_RS00395 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.2E-9 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00395 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 230 244 1.2E-9 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00395 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.2E-9 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00395 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.2E-9 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00395 6da37ee417fa181292482f435ad81069 292 SUPERFAMILY SSF53474 15 278 6.34E-39 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00395 6da37ee417fa181292482f435ad81069 292 Pfam PF00561 alpha/beta hydrolase fold 34 132 1.1E-11 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00395 6da37ee417fa181292482f435ad81069 292 Gene3D G3DSA:3.40.50.1820 28 285 1.3E-50 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS01950 fc2b9a77ff4ee0a59caf4bcb68d941bb 464 PANTHER PTHR22773:SF41 1 458 1.4E-93 T 20-04-2016 APH_RS01950 fc2b9a77ff4ee0a59caf4bcb68d941bb 464 Pfam PF00361 Proton-conducting membrane transporter 120 402 7.7E-58 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APH_RS01950 fc2b9a77ff4ee0a59caf4bcb68d941bb 464 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 460 15.343 T 20-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APH_RS01950 fc2b9a77ff4ee0a59caf4bcb68d941bb 464 PANTHER PTHR22773 1 458 1.4E-93 T 20-04-2016 APH_RS02115 c94f9223d502038bc01f6639df2dfa80 277 PIRSF PIRSF035875 1 276 1.9E-51 T 20-04-2016 IPR017039 Virulence factor BrkB APH_RS02115 c94f9223d502038bc01f6639df2dfa80 277 PANTHER PTHR30213:SF1 10 277 4.9E-35 T 20-04-2016 APH_RS02115 c94f9223d502038bc01f6639df2dfa80 277 Pfam PF03631 Virulence factor BrkB 22 271 9.8E-50 T 20-04-2016 IPR017039 Virulence factor BrkB APH_RS02115 c94f9223d502038bc01f6639df2dfa80 277 PANTHER PTHR30213 10 277 4.9E-35 T 20-04-2016 APH_RS02115 c94f9223d502038bc01f6639df2dfa80 277 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 270 1.8E-27 T 20-04-2016 IPR017039 Virulence factor BrkB APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 392 19.419 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Pfam PF14450 Cell division protein FtsA 193 356 7.0E-18 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 1 356 1.5E-81 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Pfam PF02491 SHS2 domain inserted in FTSA 74 147 8.5E-11 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.30.420.40 2 124 2.8E-13 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.30.420.40 282 333 7.3E-20 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.30.420.40 182 219 7.3E-20 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 SMART SM00842 1 181 4.8E-52 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 SUPERFAMILY SSF53067 183 359 1.6E-33 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 PANTHER PTHR32432 1 393 1.7E-74 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.90.640.10 220 281 8.3E-19 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 PANTHER PTHR32432:SF4 1 393 1.7E-74 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 SUPERFAMILY SSF53067 2 182 1.77E-32 T 20-04-2016 APH_RS04670 754fc6b3fc19da6e5138f57cdfb81acd 394 PIRSF PIRSF003101 1 391 3.2E-92 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 Gene3D G3DSA:2.140.10.10 58 171 1.1E-13 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 Gene3D G3DSA:2.140.10.10 291 385 4.7E-4 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 Gene3D G3DSA:2.140.10.10 172 281 3.1E-17 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 SUPERFAMILY SSF50998 68 383 4.19E-46 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 Pfam PF13360 PQQ-like domain 81 315 4.1E-42 T 20-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 SMART SM00564 152 185 49.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 SMART SM00564 68 100 70.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 SMART SM00564 285 317 110.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 SMART SM00564 112 143 2.6 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_RS01725 b63c63fdf716f642886fcc78dc14b5ce 393 SMART SM00564 248 279 22.0 T 20-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_RS03475 e6be08f988c95350506dbea3b922b6a8 241 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 7 231 6.9E-45 T 20-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APH_RS03475 e6be08f988c95350506dbea3b922b6a8 241 SUPERFAMILY SSF55681 4 193 3.73E-44 T 20-04-2016 APH_RS03475 e6be08f988c95350506dbea3b922b6a8 241 Pfam PF03099 Biotin/lipoate A/B protein ligase family 14 138 7.5E-15 T 20-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APH_RS03475 e6be08f988c95350506dbea3b922b6a8 241 Gene3D G3DSA:3.30.930.10 11 193 1.6E-48 T 20-04-2016 APH_RS03475 e6be08f988c95350506dbea3b922b6a8 241 PANTHER PTHR12835 4 231 1.2E-47 T 20-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Gene3D G3DSA:3.40.50.300 59 246 2.6E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Gene3D G3DSA:3.40.50.300 284 301 2.6E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 PANTHER PTHR11262:SF4 10 376 4.9E-224 T 20-04-2016 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Gene3D G3DSA:1.10.8.60 306 395 5.2E-31 T 20-04-2016 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 SMART SM00994 8 47 2.2E-20 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 SUPERFAMILY SSF57716 9 44 2.0E-10 T 20-04-2016 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Pfam PF06689 ClpX C4-type zinc finger 10 46 4.3E-17 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 PANTHER PTHR11262 10 376 4.9E-224 T 20-04-2016 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Pfam PF07724 AAA domain (Cdc48 subfamily) 105 301 1.3E-47 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 SUPERFAMILY SSF52540 58 384 6.41E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 307 376 8.1E-13 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 405 49.414 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 SMART SM01086 307 398 1.5E-24 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 SMART SM00382 104 257 1.5E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS03825 91f6cf2cd2ed5becc733f7a35fcb0292 415 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 395 1.8E-184 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PANTHER PTHR11404:SF8 1 203 6.7E-87 T 20-04-2016 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 196 9.5E-34 T 20-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 20-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 1.1E-14 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 24 37 1.1E-14 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 1.1E-14 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.1E-14 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PANTHER PTHR11404 1 203 6.7E-87 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Gene3D G3DSA:1.10.287.990 20 88 7.1E-17 T 20-04-2016 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 SUPERFAMILY SSF54719 90 202 2.75E-41 T 20-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 88 2.3E-22 T 20-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PIRSF PIRSF000349 1 205 1.4E-71 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS01620 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 SUPERFAMILY SSF46609 1 89 1.09E-24 T 20-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 131 141 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 83 99 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 SUPERFAMILY SSF55620 21 208 3.85E-59 T 20-04-2016 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 Gene3D G3DSA:3.30.1130.10 80 208 1.4E-44 T 20-04-2016 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 Pfam PF01227 GTP cyclohydrolase I 27 206 1.1E-56 T 20-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 22 208 29.556 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 Gene3D G3DSA:1.10.286.10 22 65 1.0E-17 T 20-04-2016 APH_RS02925 62274203d2ddccfdb4703d55b81fca12 211 PANTHER PTHR11109 23 204 1.4E-54 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS02475 2b3767f689fa82d3bb4b4c6ced565983 218 PANTHER PTHR10509 41 217 6.3E-40 T 20-04-2016 APH_RS02475 2b3767f689fa82d3bb4b4c6ced565983 218 SUPERFAMILY SSF53335 30 216 1.33E-32 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS02475 2b3767f689fa82d3bb4b4c6ced565983 218 Pfam PF01596 O-methyltransferase 34 216 7.0E-37 T 20-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 APH_RS02475 2b3767f689fa82d3bb4b4c6ced565983 218 Gene3D G3DSA:3.40.50.150 10 217 2.9E-53 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 SUPERFAMILY SSF51621 514 869 1.22E-107 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 PANTHER PTHR22931:SF9 3 873 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 PIRSF PIRSF000853 2 874 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 505 4.7E-25 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.20.20.60 535 870 1.2E-117 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:1.20.80.30 115 201 5.9E-22 T 20-04-2016 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:1.10.189.10 345 403 2.5E-22 T 20-04-2016 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.50.30.10 404 508 2.6E-35 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 SUPERFAMILY SSF56059 5 382 6.0E-124 T 20-04-2016 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 SUPERFAMILY SSF52009 392 514 3.53E-33 T 20-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 759 777 - T 20-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 523 867 7.7E-80 T 20-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 869 0.0 T 20-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.30.470.20 247 344 3.1E-38 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 58 299 1.7E-32 T 20-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 307 359 9.5E-10 T 20-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 69 6.7E-9 T 20-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.30.1490.20 6 114 4.4E-46 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.30.1490.20 203 246 4.4E-46 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 PANTHER PTHR22931 3 873 0.0 T 20-04-2016 APH_RS00815 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 20-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 SMART SM00474 1 174 3.6E-31 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 PANTHER PTHR12124 2 303 9.0E-43 T 20-04-2016 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 SUPERFAMILY SSF47819 297 360 5.01E-7 T 20-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 Gene3D G3DSA:3.30.420.10 8 187 9.5E-18 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 SUPERFAMILY SSF53098 2 194 3.42E-56 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 Pfam PF01612 3'-5' exonuclease 7 173 3.0E-36 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_RS00615 72659a1ba7e0217a56fa938bf7b823e5 381 PANTHER PTHR12124:SF42 2 303 9.0E-43 T 20-04-2016 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 Gene3D G3DSA:3.30.200.20 8 95 1.7E-34 T 20-04-2016 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 SUPERFAMILY SSF56104 5 237 2.55E-74 T 20-04-2016 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 ProSitePatterns PS01057 SAICAR synthetase signature 1. 88 102 - T 20-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 Gene3D G3DSA:3.30.470.20 96 224 1.4E-48 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 239 30.58 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 PANTHER PTHR11609:SF2 5 237 1.5E-108 T 20-04-2016 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 PANTHER PTHR11609 5 237 1.5E-108 T 20-04-2016 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 213 3.8E-69 T 20-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 Pfam PF01259 SAICAR synthetase 8 236 9.2E-59 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APH_RS00550 4c722e999cecfa3e65d8ddd99c615dfe 244 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 20-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APH_RS05250 5568708c6f1b697bc9c92d3102410812 177 Pfam PF02441 Flavoprotein 1 128 2.4E-35 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APH_RS05250 5568708c6f1b697bc9c92d3102410812 177 PANTHER PTHR14359 2 174 3.9E-66 T 20-04-2016 APH_RS05250 5568708c6f1b697bc9c92d3102410812 177 Gene3D G3DSA:3.40.50.1950 2 174 1.5E-61 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APH_RS05250 5568708c6f1b697bc9c92d3102410812 177 PANTHER PTHR14359:SF20 2 174 3.9E-66 T 20-04-2016 APH_RS05250 5568708c6f1b697bc9c92d3102410812 177 SUPERFAMILY SSF52507 1 174 4.58E-56 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF00271 Helicase conserved C-terminal domain 441 543 1.0E-18 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.30.2060.10 160 237 3.9E-11 T 20-04-2016 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 SMART SM00490 458 544 1.4E-20 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF52540 34 81 1.02E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF52540 457 566 1.02E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF12344 Ultra-violet resistance protein B 550 591 5.7E-23 T 20-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 648 6.7E-292 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 276 336 6.9E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 5 88 6.9E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 386 407 6.9E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 PANTHER PTHR24029 1 648 0.0 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF02151 UvrB/uvrC motif 619 649 6.0E-7 T 20-04-2016 IPR001943 UVR domain GO:0005515 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 417 577 9.4E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF46600 616 650 8.63E-8 T 20-04-2016 IPR001943 UVR domain GO:0005515 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:4.10.860.10 614 650 5.6E-10 T 20-04-2016 IPR001943 UVR domain GO:0005515 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF04851 Type III restriction enzyme, res subunit 15 110 2.8E-8 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 SMART SM00487 8 423 2.4E-19 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF52540 3 413 3.09E-120 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05550 1f3410634c7813e5ab08d5959d98d5b0 653 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 651 40.273 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 SUPERFAMILY SSF52540 318 555 4.89E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01105 a3669d604c3919b1a963b053d0673580 568 SMART SM00382 355 543 1.0E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01105 a3669d604c3919b1a963b053d0673580 568 Gene3D G3DSA:1.20.1560.10 11 310 5.2E-38 T 20-04-2016 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 PANTHER PTHR24222 9 567 1.7E-197 T 20-04-2016 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 SUPERFAMILY SSF90123 3 314 3.53E-41 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 PANTHER PTHR24222:SF0 9 567 1.7E-197 T 20-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 Pfam PF00664 ABC transporter transmembrane region 22 279 7.8E-11 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 Gene3D G3DSA:3.40.50.300 329 555 7.3E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01105 a3669d604c3919b1a963b053d0673580 568 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 13 556 1.9E-202 T 20-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 APH_RS01105 a3669d604c3919b1a963b053d0673580 568 Pfam PF00005 ABC transporter 347 494 1.7E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 Gene3D G3DSA:1.10.150.130 16 115 6.8E-17 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 Gene3D G3DSA:1.10.443.10 143 300 9.4E-47 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 PANTHER PTHR30349:SF5 25 310 1.5E-68 T 20-04-2016 APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 Pfam PF00589 Phage integrase family 134 297 2.8E-36 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 312 26.626 T 20-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 107 4.7E-12 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 SUPERFAMILY SSF56349 14 302 5.0E-47 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APH_RS00870 b588fe3366592ec9cd36ab3e1c72a964 319 PANTHER PTHR30349 25 310 1.5E-68 T 20-04-2016 APH_RS05375 f6217a0353df45c0a1debf9d273de772 205 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 3 36 3.3E-10 T 20-04-2016 IPR011723 Zinc finger/thioredoxin putative APH_RS05375 f6217a0353df45c0a1debf9d273de772 205 Pfam PF13717 zinc-ribbon domain 3 36 2.6E-11 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Pfam PF14520 Helix-hairpin-helix domain 451 509 3.1E-6 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:3.30.1480.10 9 145 4.2E-21 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 PANTHER PTHR22648:SF0 90 467 3.7E-118 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 PANTHER PTHR22648:SF0 8 71 3.7E-118 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF47794 448 511 2.94E-6 T 20-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF50249 151 218 5.24E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 384 431 4.9E-15 T 20-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 12 358 4.5E-105 T 20-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Pfam PF13184 NusA-like KH domain 249 317 2.4E-28 T 20-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:2.40.50.140 148 217 5.3E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF54814 221 296 9.16E-27 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:3.30.300.20 219 296 1.3E-32 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF69705 9 145 8.37E-23 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:3.30.300.20 298 362 1.3E-24 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:1.10.150.20 376 435 1.6E-11 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:1.10.150.20 449 509 2.4E-8 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF54814 298 360 1.18E-14 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SMART SM00322 323 384 0.28 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SMART SM00322 249 322 0.004 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Pfam PF08529 NusA N-terminal domain 11 144 1.7E-18 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SMART SM00316 153 219 3.0E-9 T 20-04-2016 IPR022967 RNA-binding domain, S1 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 448 25.568 T 20-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF47794 375 433 1.55E-10 T 20-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 PANTHER PTHR22648 90 467 3.7E-118 T 20-04-2016 APH_RS01980 35f81952572cbac7b2c2a4baf098cf2f 514 PANTHER PTHR22648 8 71 3.7E-118 T 20-04-2016 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 173 302 1.4E-23 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 7.0E-24 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 SUPERFAMILY SSF52540 3 164 1.14E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 PIRSF PIRSF006485 1 438 6.5E-154 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 430 1.8E-149 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Hamap MF_00195 GTPase Der [der]. 1 433 32.834 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 9.7E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 9.7E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 PANTHER PTHR11649 1 430 6.9E-107 T 20-04-2016 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Gene3D G3DSA:3.40.50.300 3 166 3.4E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Gene3D G3DSA:3.40.50.300 171 356 4.8E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 SUPERFAMILY SSF52540 138 436 2.59E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Pfam PF01926 50S ribosome-binding GTPase 177 294 1.9E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Pfam PF01926 50S ribosome-binding GTPase 3 118 3.5E-25 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Gene3D G3DSA:3.30.300.20 357 431 3.2E-25 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 PANTHER PTHR11649:SF5 1 430 6.9E-107 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APH_RS01720 d5f078e4e042e4ee2a7508f6560a35e9 440 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 430 1.5E-23 T 20-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APH_RS02565 c6b0c43bc7a02d5efd17ef69e4327f6b 399 SUPERFAMILY SSF118215 17 378 8.24E-37 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS02565 c6b0c43bc7a02d5efd17ef69e4327f6b 399 Gene3D G3DSA:1.10.3860.10 28 379 2.3E-19 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS02565 c6b0c43bc7a02d5efd17ef69e4327f6b 399 Pfam PF00375 Sodium:dicarboxylate symporter family 11 378 1.5E-26 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 20-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 33.66 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 PANTHER PTHR12220 4 137 1.6E-58 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 4 128 6.3E-51 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 SUPERFAMILY SSF54686 3 135 1.02E-50 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 Gene3D G3DSA:3.90.1170.10 24 135 8.3E-49 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 25 37 3.5E-34 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 43 54 3.5E-34 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 59 88 3.5E-34 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 89 118 3.5E-34 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APH_RS01255 ecf6a48c2ef9cb65eb36b86a415b6942 137 Pfam PF00252 Ribosomal protein L16p/L10e 5 133 8.5E-44 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 20-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 Gene3D G3DSA:3.40.140.10 110 232 2.4E-41 T 20-04-2016 APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 SUPERFAMILY SSF47781 37 91 8.01E-6 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 SUPERFAMILY SSF102712 157 198 6.15E-5 T 20-04-2016 APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 Pfam PF04002 RadC-like JAB domain 112 230 4.0E-38 T 20-04-2016 IPR025657 RadC-like JAB domain APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 PANTHER PTHR30471 6 232 4.6E-64 T 20-04-2016 APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 Gene3D G3DSA:1.10.150.20 55 85 8.0E-5 T 20-04-2016 APH_RS01065 814d9e4cf89b6a2d99b94a897515136a 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 19 232 1.5E-52 T 20-04-2016 IPR001405 RadC protein APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.3E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 1.3E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.3E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 1.3E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 1.3E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.3E-30 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 148 508 3.9E-102 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Pfam PF09334 tRNA synthetases class I (M) 145 365 1.7E-64 T 20-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 SUPERFAMILY SSF47323 354 507 1.5E-32 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 508 42.358 T 20-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PANTHER PTHR11946:SF1 2 511 9.0E-197 T 20-04-2016 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:2.170.220.10 117 225 2.1E-38 T 20-04-2016 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:3.40.50.620 226 341 5.5E-69 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:3.40.50.620 4 114 5.5E-69 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 PANTHER PTHR11946 2 511 9.0E-197 T 20-04-2016 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 SUPERFAMILY SSF52374 3 351 2.68E-104 T 20-04-2016 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:1.10.730.10 344 507 2.5E-38 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS04290 3f1a5792afd7e822498ba16d067493d8 513 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 133 1.6E-11 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS00370 a8c408751dfd06349aa26e26c8d3ccba 85 Pfam PF04800 ETC complex I subunit conserved region 1 83 4.0E-23 T 20-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 APH_RS00370 a8c408751dfd06349aa26e26c8d3ccba 85 PANTHER PTHR12219 1 79 4.0E-18 T 20-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 APH_RS00370 a8c408751dfd06349aa26e26c8d3ccba 85 Gene3D G3DSA:3.30.160.190 1 64 3.8E-20 T 20-04-2016 APH_RS00370 a8c408751dfd06349aa26e26c8d3ccba 85 PANTHER PTHR12219:SF18 1 79 4.0E-18 T 20-04-2016 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 13 78 1.6E-14 T 20-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 SUPERFAMILY SSF51998 490 561 2.84E-136 T 20-04-2016 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 SUPERFAMILY SSF51998 80 459 2.84E-136 T 20-04-2016 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 Gene3D G3DSA:3.20.70.20 516 561 5.0E-61 T 20-04-2016 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 Gene3D G3DSA:3.20.70.20 11 455 5.0E-61 T 20-04-2016 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 Pfam PF02867 Ribonucleotide reductase, barrel domain 411 556 2.8E-33 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 Pfam PF02867 Ribonucleotide reductase, barrel domain 82 403 6.4E-76 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 SUPERFAMILY SSF48168 5 77 1.31E-16 T 20-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 PANTHER PTHR11573 5 569 2.0E-208 T 20-04-2016 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 PRINTS PR01183 Ribonucleotide reductase large chain signature 374 397 2.1E-14 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 PRINTS PR01183 Ribonucleotide reductase large chain signature 155 174 2.1E-14 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS01450 8cd9871d4bf045629095d1a9f2c1d13f 596 PRINTS PR01183 Ribonucleotide reductase large chain signature 346 368 2.1E-14 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_RS02230 d5bf2d18add87a0d04d831673dac4e82 135 Gene3D G3DSA:3.90.940.10 15 61 1.6E-8 T 20-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS02230 d5bf2d18add87a0d04d831673dac4e82 135 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 14 57 3.0E-8 T 20-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS02230 d5bf2d18add87a0d04d831673dac4e82 135 Pfam PF01192 RNA polymerase Rpb6 14 59 4.0E-9 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS02230 d5bf2d18add87a0d04d831673dac4e82 135 SUPERFAMILY SSF63562 14 73 1.71E-13 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS02230 d5bf2d18add87a0d04d831673dac4e82 135 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 12.927 T 20-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS02230 d5bf2d18add87a0d04d831673dac4e82 135 SMART SM01409 7 60 7.3E-10 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS02630 f87e32e45d75bb81bbb6640a589564c2 116 SUPERFAMILY SSF55620 5 113 1.61E-19 T 20-04-2016 APH_RS02630 f87e32e45d75bb81bbb6640a589564c2 116 TIGRFAM TIGR00526 folB_dom: FolB domain 4 114 4.4E-16 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS02630 f87e32e45d75bb81bbb6640a589564c2 116 SMART SM00905 5 110 5.1E-19 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS02630 f87e32e45d75bb81bbb6640a589564c2 116 Gene3D G3DSA:3.30.1130.10 5 109 7.9E-17 T 20-04-2016 APH_RS02630 f87e32e45d75bb81bbb6640a589564c2 116 Pfam PF02152 Dihydroneopterin aldolase 6 108 9.8E-17 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS04405 c94d6f79805dbd6faabd3457618a6ec9 406 SUPERFAMILY SSF56954 1 403 3.4E-59 T 20-04-2016 APH_RS04405 c94d6f79805dbd6faabd3457618a6ec9 406 Gene3D G3DSA:1.20.1600.10 21 403 3.9E-42 T 20-04-2016 APH_RS04405 c94d6f79805dbd6faabd3457618a6ec9 406 PANTHER PTHR30026 1 406 1.7E-33 T 20-04-2016 APH_RS04405 c94d6f79805dbd6faabd3457618a6ec9 406 PANTHER PTHR30026:SF3 1 406 1.7E-33 T 20-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APH_RS04405 c94d6f79805dbd6faabd3457618a6ec9 406 Pfam PF02321 Outer membrane efflux protein 220 401 2.3E-17 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APH_RS04405 c94d6f79805dbd6faabd3457618a6ec9 406 Pfam PF02321 Outer membrane efflux protein 24 194 1.5E-18 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APH_RS01735 a73e7a431ed020f8a5e5a947422ac08f 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 355 2.8E-36 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APH_RS01735 a73e7a431ed020f8a5e5a947422ac08f 359 PANTHER PTHR30469 3 354 2.0E-32 T 20-04-2016 APH_RS01735 a73e7a431ed020f8a5e5a947422ac08f 359 Gene3D G3DSA:2.40.50.100 169 200 7.5E-14 T 20-04-2016 APH_RS01735 a73e7a431ed020f8a5e5a947422ac08f 359 Gene3D G3DSA:2.40.50.100 75 108 7.5E-14 T 20-04-2016 APH_RS01735 a73e7a431ed020f8a5e5a947422ac08f 359 SUPERFAMILY SSF111369 66 278 3.01E-21 T 20-04-2016 APH_RS01735 a73e7a431ed020f8a5e5a947422ac08f 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 262 2.9E-17 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 Pfam PF00380 Ribosomal protein S9/S16 34 154 7.6E-43 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 PANTHER PTHR21569 28 154 3.8E-55 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 Gene3D G3DSA:3.30.230.10 29 154 1.8E-45 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 SUPERFAMILY SSF54211 29 154 1.67E-42 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 25 154 28.969 T 20-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 ProSitePatterns PS00360 Ribosomal protein S9 signature. 93 111 - T 20-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APH_RS04395 2d2ad320195bafe9ef7ef3953675a963 154 PANTHER PTHR21569:SF1 28 154 3.8E-55 T 20-04-2016 APH_RS05125 5d6d406830928d102088bd6437eaead2 171 Gene3D G3DSA:2.40.30.60 4 91 1.5E-18 T 20-04-2016 IPR002676 RimM protein GO:0006364 APH_RS05125 5d6d406830928d102088bd6437eaead2 171 SUPERFAMILY SSF50447 7 91 3.53E-16 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS05125 5d6d406830928d102088bd6437eaead2 171 SUPERFAMILY SSF50346 97 165 5.81E-11 T 20-04-2016 IPR011033 PRC-barrel-like APH_RS05125 5d6d406830928d102088bd6437eaead2 171 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 165 1.2E-34 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APH_RS05125 5d6d406830928d102088bd6437eaead2 171 Pfam PF01782 RimM N-terminal domain 10 86 1.4E-17 T 20-04-2016 IPR002676 RimM protein GO:0006364 APH_RS05125 5d6d406830928d102088bd6437eaead2 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 167 20.266 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APH_RS05125 5d6d406830928d102088bd6437eaead2 171 PANTHER PTHR33692 1 166 1.8E-27 T 20-04-2016 APH_RS05125 5d6d406830928d102088bd6437eaead2 171 Gene3D G3DSA:2.30.30.240 97 165 5.3E-11 T 20-04-2016 APH_RS00855 d602d20d9231bb166395450ffa925a98 258 Pfam PF08478 POTRA domain, FtsQ-type 68 135 2.6E-8 T 20-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APH_RS00855 d602d20d9231bb166395450ffa925a98 258 Pfam PF03799 Cell division protein FtsQ 139 250 3.6E-8 T 20-04-2016 IPR005548 Cell division protein FtsQ/DivIB APH_RS04805 e7aaf2966c963b049e328b54ec2ecd2d 170 Gene3D G3DSA:2.160.10.10 8 169 2.5E-44 T 20-04-2016 APH_RS04805 e7aaf2966c963b049e328b54ec2ecd2d 170 PANTHER PTHR13061 10 169 2.3E-75 T 20-04-2016 APH_RS04805 e7aaf2966c963b049e328b54ec2ecd2d 170 SUPERFAMILY SSF51161 7 167 1.01E-45 T 20-04-2016 IPR011004 Trimeric LpxA-like APH_RS04805 e7aaf2966c963b049e328b54ec2ecd2d 170 PANTHER PTHR13061:SF11 10 169 2.3E-75 T 20-04-2016 APH_RS04805 e7aaf2966c963b049e328b54ec2ecd2d 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 125 0.0026 T 20-04-2016 IPR001451 Hexapeptide repeat APH_RS04805 e7aaf2966c963b049e328b54ec2ecd2d 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 47 1.9E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APH_RS05160 65598b977008e97163ebf362798194a5 163 Pfam PF02542 YgbB family 3 159 7.9E-57 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS05160 65598b977008e97163ebf362798194a5 163 Gene3D G3DSA:3.30.1330.50 1 162 1.1E-63 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS05160 65598b977008e97163ebf362798194a5 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 41 56 - T 20-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS05160 65598b977008e97163ebf362798194a5 163 PANTHER PTHR32125 1 159 2.7E-40 T 20-04-2016 APH_RS05160 65598b977008e97163ebf362798194a5 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 162 31.212 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS05160 65598b977008e97163ebf362798194a5 163 SUPERFAMILY SSF69765 1 162 2.22E-58 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS05160 65598b977008e97163ebf362798194a5 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 160 5.3E-58 T 20-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 Pfam PF00557 Metallopeptidase family M24 291 503 1.4E-44 T 20-04-2016 IPR000994 Peptidase M24, structural domain APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 PANTHER PTHR10804:SF105 264 567 4.0E-169 T 20-04-2016 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 PANTHER PTHR10804:SF105 1 171 4.0E-169 T 20-04-2016 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 Gene3D G3DSA:3.90.230.10 284 536 1.9E-59 T 20-04-2016 IPR000994 Peptidase M24, structural domain APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 SUPERFAMILY SSF53092 1 122 1.6E-7 T 20-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 122 1.8E-10 T 20-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 Gene3D G3DSA:3.40.350.10 2 93 1.5E-11 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 Pfam PF16188 C-terminal region of peptidase_M24 510 569 4.0E-21 T 20-04-2016 IPR032416 Peptidase M24, C-terminal domain APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 PANTHER PTHR10804 264 567 4.0E-169 T 20-04-2016 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 PANTHER PTHR10804 1 171 4.0E-169 T 20-04-2016 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 Pfam PF16189 Creatinase/Prolidase N-terminal domain 139 288 9.4E-27 T 20-04-2016 APH_RS01555 4b8ff222107a43da87b8103a85b59272 569 SUPERFAMILY SSF55920 285 535 5.23E-59 T 20-04-2016 IPR000994 Peptidase M24, structural domain APH_RS00970 a87a3da13b77b74e2eda87f55f61e74c 222 SUPERFAMILY SSF51261 50 211 5.75E-22 T 20-04-2016 IPR011055 Duplicated hybrid motif APH_RS00970 a87a3da13b77b74e2eda87f55f61e74c 222 Gene3D G3DSA:2.70.70.10 83 215 8.2E-21 T 20-04-2016 APH_RS00970 a87a3da13b77b74e2eda87f55f61e74c 222 Pfam PF01551 Peptidase family M23 110 209 2.4E-16 T 20-04-2016 IPR016047 Peptidase M23 APH_RS00970 a87a3da13b77b74e2eda87f55f61e74c 222 PANTHER PTHR21666 66 216 9.6E-13 T 20-04-2016 APH_RS00970 a87a3da13b77b74e2eda87f55f61e74c 222 PANTHER PTHR21666:SF200 66 216 9.6E-13 T 20-04-2016 APH_RS01540 1badde3af56066f2c142ae574db56d4f 278 Gene3D G3DSA:3.30.420.10 5 16 1.2E-22 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS01540 1badde3af56066f2c142ae574db56d4f 278 Gene3D G3DSA:3.30.420.10 51 225 1.2E-22 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS01540 1badde3af56066f2c142ae574db56d4f 278 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 52 266 3.4E-77 T 20-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like APH_RS01540 1badde3af56066f2c142ae574db56d4f 278 SUPERFAMILY SSF53098 45 233 1.75E-32 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00260 3db7bafa3c5c9b8544d5324fcba0073e 96 SUPERFAMILY SSF54565 3 80 2.49E-30 T 20-04-2016 IPR023803 Ribosomal protein S16 domain APH_RS00260 3db7bafa3c5c9b8544d5324fcba0073e 96 PANTHER PTHR12919 2 79 1.3E-35 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00260 3db7bafa3c5c9b8544d5324fcba0073e 96 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 2.7E-29 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00260 3db7bafa3c5c9b8544d5324fcba0073e 96 Gene3D G3DSA:3.30.1320.10 3 79 2.7E-30 T 20-04-2016 IPR023803 Ribosomal protein S16 domain APH_RS00260 3db7bafa3c5c9b8544d5324fcba0073e 96 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.958 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00260 3db7bafa3c5c9b8544d5324fcba0073e 96 Pfam PF00886 Ribosomal protein S16 9 70 1.1E-25 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 Hamap MF_00268 Protein RecA [recA]. 8 332 48.521 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 SMART SM00382 60 231 1.0E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 Pfam PF00154 recA bacterial DNA recombination protein 10 271 1.2E-135 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PANTHER PTHR22942:SF1 8 338 2.1E-181 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 SUPERFAMILY SSF54752 271 327 8.11E-16 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 168 197 4.4E-83 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 246 275 4.4E-83 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 300 317 4.4E-83 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 213 241 4.4E-83 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 96 125 4.4E-83 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 130 159 4.4E-83 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 SUPERFAMILY SSF52540 7 270 4.95E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 Gene3D G3DSA:3.40.50.300 35 270 1.4E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 ProSitePatterns PS00321 recA signature. 216 224 - T 20-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 Gene3D G3DSA:3.30.250.10 271 329 1.5E-20 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 7 326 5.1E-161 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_RS05510 b3edf733febf6e97cf1be8da7b1dcdc3 354 PANTHER PTHR22942 8 338 2.1E-181 T 20-04-2016 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF141259 456 523 6.15E-18 T 20-04-2016 IPR003711 CarD-like/TRCF domain APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF143517 982 1103 3.01E-29 T 20-04-2016 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM01058 463 558 7.2E-32 T 20-04-2016 IPR003711 CarD-like/TRCF domain APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF00271 Helicase conserved C-terminal domain 786 891 6.0E-17 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 PANTHER PTHR14025:SF21 380 1098 6.4E-263 T 20-04-2016 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF52540 9 326 1.02E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF52540 354 458 2.0E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF02559 CarD-like/TRCF domain 464 554 1.7E-19 T 20-04-2016 IPR003711 CarD-like/TRCF domain APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 PANTHER PTHR14025 380 1098 6.4E-263 T 20-04-2016 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF52540 637 904 1.48E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.30.2060.10 122 197 8.1E-10 T 20-04-2016 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF03461 TRCF domain 990 1073 6.2E-24 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 139 1061 4.1E-280 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM00982 988 1088 5.9E-33 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.40.50.300 769 945 2.4E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 9 1126 25.607 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF00270 DEAD/DEAH box helicase 589 746 2.5E-16 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM00490 805 892 2.2E-16 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.40.50.300 574 768 5.8E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00505 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM00487 581 778 1.9E-28 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 SUPERFAMILY SSF55681 5 205 5.55E-60 T 20-04-2016 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 PANTHER PTHR10993 1 205 3.7E-64 T 20-04-2016 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 126 8.0E-16 T 20-04-2016 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 PIRSF PIRSF016262 2 206 6.6E-56 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 PANTHER PTHR10993:SF10 1 205 3.7E-64 T 20-04-2016 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 161 6.5E-9 T 20-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 205 7.5E-48 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 Hamap MF_00013 Octanoyltransferase [lipB]. 1 206 33.001 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS01070 9c2224121597bdd09d6d360bdb22433a 206 Gene3D G3DSA:3.90.1550.10 3 205 2.9E-67 T 20-04-2016 APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 8 108 9.5E-13 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 Gene3D G3DSA:3.30.230.10 8 117 9.8E-23 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 3 119 13.58 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 74 4.0E-7 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 20-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 SUPERFAMILY SSF54211 3 118 9.61E-21 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS01360 854d22a2dd362bbb4f7317a84cf1e7bb 120 Pfam PF00825 Ribonuclease P 7 116 1.4E-20 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_RS00860 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:1.10.10.60 414 462 4.2E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APH_RS00860 c595389026de0260a540613654b7a54d 465 PANTHER PTHR32071 1 462 1.3E-145 T 20-04-2016 APH_RS00860 c595389026de0260a540613654b7a54d 465 PANTHER PTHR32071:SF17 1 462 1.3E-145 T 20-04-2016 APH_RS00860 c595389026de0260a540613654b7a54d 465 SUPERFAMILY SSF52172 14 194 1.85E-40 T 20-04-2016 IPR011006 CheY-like superfamily APH_RS00860 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:3.40.50.300 149 323 7.2E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00860 c595389026de0260a540613654b7a54d 465 Pfam PF02954 Bacterial regulatory protein, Fis family 420 458 3.2E-10 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APH_RS00860 c595389026de0260a540613654b7a54d 465 SUPERFAMILY SSF46689 365 462 3.45E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APH_RS00860 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:3.40.50.2300 14 139 3.9E-34 T 20-04-2016 APH_RS00860 c595389026de0260a540613654b7a54d 465 SUPERFAMILY SSF52540 150 396 5.61E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00860 c595389026de0260a540613654b7a54d 465 Pfam PF00072 Response regulator receiver domain 15 126 5.1E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS00860 c595389026de0260a540613654b7a54d 465 SMART SM00382 171 316 1.6E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS00860 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:1.10.8.60 328 399 2.2E-17 T 20-04-2016 APH_RS00860 c595389026de0260a540613654b7a54d 465 SMART SM00448 13 126 1.4E-33 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS00860 c595389026de0260a540613654b7a54d 465 Pfam PF00158 Sigma-54 interaction domain 151 318 1.0E-34 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APH_RS00860 c595389026de0260a540613654b7a54d 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 20-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APH_RS05565 bfb85188a1a50c826155b3381add3860 290 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 109 281 2.9E-63 T 20-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain APH_RS05565 bfb85188a1a50c826155b3381add3860 290 SUPERFAMILY SSF52141 95 282 2.71E-56 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APH_RS05565 bfb85188a1a50c826155b3381add3860 290 SMART SM00986 122 275 1.2E-35 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APH_RS05565 bfb85188a1a50c826155b3381add3860 290 PANTHER PTHR33693 97 289 2.1E-67 T 20-04-2016 APH_RS05565 bfb85188a1a50c826155b3381add3860 290 Pfam PF03167 Uracil DNA glycosylase superfamily 123 275 2.2E-41 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APH_RS05565 bfb85188a1a50c826155b3381add3860 290 Gene3D G3DSA:3.40.470.10 97 283 1.0E-60 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APH_RS05565 bfb85188a1a50c826155b3381add3860 290 SMART SM00987 122 275 1.2E-35 T 20-04-2016 APH_RS05565 bfb85188a1a50c826155b3381add3860 290 PANTHER PTHR33693:SF1 97 289 2.1E-67 T 20-04-2016 APH_RS02150 d9a2b37ee1731ec3303971d4870fa7e4 218 SUPERFAMILY SSF51569 1 211 3.35E-72 T 20-04-2016 APH_RS02150 d9a2b37ee1731ec3303971d4870fa7e4 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 20-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APH_RS02150 d9a2b37ee1731ec3303971d4870fa7e4 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 2.4E-81 T 20-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APH_RS02150 d9a2b37ee1731ec3303971d4870fa7e4 218 Gene3D G3DSA:3.20.20.70 1 211 3.1E-66 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS02150 d9a2b37ee1731ec3303971d4870fa7e4 218 PANTHER PTHR10683 1 211 9.2E-73 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APH_RS02150 d9a2b37ee1731ec3303971d4870fa7e4 218 Pfam PF00923 Transaldolase 3 201 4.4E-54 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APH_RS03695 d309af50deab63df527e9b4b43acc856 370 Pfam PF02481 DNA recombination-mediator protein A 69 276 2.8E-72 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APH_RS03695 d309af50deab63df527e9b4b43acc856 370 PANTHER PTHR32039:SF8 61 365 1.3E-89 T 20-04-2016 APH_RS03695 d309af50deab63df527e9b4b43acc856 370 SUPERFAMILY SSF102405 80 285 1.85E-35 T 20-04-2016 APH_RS03695 d309af50deab63df527e9b4b43acc856 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 67 283 4.6E-67 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APH_RS03695 d309af50deab63df527e9b4b43acc856 370 Gene3D G3DSA:3.40.50.450 111 263 4.5E-8 T 20-04-2016 APH_RS03695 d309af50deab63df527e9b4b43acc856 370 PANTHER PTHR32039 61 365 1.3E-89 T 20-04-2016 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 468 868 2.49E-25 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 Pfam PF00023 Ankyrin repeat 827 858 0.01 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 44 73 9.8 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 602 632 67.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 827 856 0.0095 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 671 708 570.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 388 419 2300.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 562 595 720.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 745 774 8.3 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 178 212 75.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 144 174 160.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 216 245 0.053 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 712 741 6.7 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 499 528 0.32 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 465 495 1200.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 780 811 990.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 820 868 1.81E-43 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 149 239 1.81E-43 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 702 771 1.81E-43 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 15 81 1.81E-43 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 38 282 3.5E-29 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PRINTS PR01415 Ankyrin repeat signature 619 633 6.1E-6 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PRINTS PR01415 Ankyrin repeat signature 500 515 6.1E-6 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PANTHER PTHR24123 615 790 1.4E-46 T 20-04-2016 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PANTHER PTHR24123 461 510 1.4E-46 T 20-04-2016 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PANTHER PTHR24123 145 244 1.4E-46 T 20-04-2016 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PANTHER PTHR24123 810 868 1.4E-46 T 20-04-2016 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 PANTHER PTHR24123 42 77 1.4E-46 T 20-04-2016 APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 596 869 9.4E-52 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 390 524 9.4E-52 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 Pfam PF12796 Ankyrin repeats (3 copies) 691 758 3.5E-9 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03050 f6e8418cbedbf6a5717ee64e43ae8045 1232 Pfam PF12796 Ankyrin repeats (3 copies) 123 212 2.9E-6 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PANTHER PTHR11405 6 361 5.8E-138 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 361 3.7E-120 T 20-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 Gene3D G3DSA:3.50.30.20 7 139 1.5E-48 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 SUPERFAMILY SSF52021 6 146 2.35E-48 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 335 348 2.5E-12 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 261 2.5E-12 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 221 230 2.5E-12 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 Pfam PF00117 Glutamine amidotransferase class-I 180 357 1.5E-41 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 364 40.974 T 20-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PANTHER PTHR11405:SF4 6 361 5.8E-138 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 134 8.1E-43 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00097 Anthranilate synthase component II signature 335 348 4.7E-8 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00097 Anthranilate synthase component II signature 250 261 4.7E-8 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00097 Anthranilate synthase component II signature 221 230 4.7E-8 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 Gene3D G3DSA:3.40.50.880 166 362 4.3E-64 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 SUPERFAMILY SSF52317 170 361 5.33E-54 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 SMART SM01097 6 135 1.2E-67 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 292 303 8.6E-32 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 218 232 8.6E-32 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 284 8.6E-32 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 250 266 8.6E-32 T 20-04-2016 APH_RS01675 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 178 192 8.6E-32 T 20-04-2016 APH_RS05395 b1652b6483f53051c3c3a7865b80d463 119 SUPERFAMILY SSF52980 8 115 3.33E-18 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APH_RS05395 b1652b6483f53051c3c3a7865b80d463 119 Pfam PF02021 Uncharacterised protein family UPF0102 13 96 4.9E-12 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 APH_RS05395 b1652b6483f53051c3c3a7865b80d463 119 PANTHER PTHR34039 2 119 1.1E-15 T 20-04-2016 APH_RS05395 b1652b6483f53051c3c3a7865b80d463 119 PANTHER PTHR34039:SF1 2 119 1.1E-15 T 20-04-2016 APH_RS05395 b1652b6483f53051c3c3a7865b80d463 119 Gene3D G3DSA:3.40.1350.10 13 116 1.2E-20 T 20-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.5E-39 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.5E-39 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.5E-39 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.5E-39 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:3.40.50.300 163 344 7.5E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01035 3f2551831983d9fe150b66ed70145319 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:1.10.1780.10 1 150 7.8E-37 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.2E-20 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.0E-50 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:3.40.50.300 553 775 7.4E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:1.10.8.60 347 431 5.6E-36 T 20-04-2016 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 SUPERFAMILY SSF52540 547 851 5.48E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01035 3f2551831983d9fe150b66ed70145319 859 SUPERFAMILY SSF81923 4 158 9.42E-34 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 SMART SM00382 201 347 7.8E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01035 3f2551831983d9fe150b66ed70145319 859 SMART SM00382 597 748 6.9E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01035 3f2551831983d9fe150b66ed70145319 859 SUPERFAMILY SSF52540 162 524 8.65E-96 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01035 3f2551831983d9fe150b66ed70145319 859 PANTHER PTHR11638:SF18 1 857 0.0 T 20-04-2016 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 PANTHER PTHR11638 1 857 0.0 T 20-04-2016 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 207 339 1.7E-12 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 1.9E-6 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 147 2.9E-7 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:1.10.8.60 776 856 3.0E-24 T 20-04-2016 APH_RS01035 3f2551831983d9fe150b66ed70145319 859 SMART SM01086 766 855 8.1E-27 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF81886 615 860 2.09E-58 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF52540 405 613 5.32E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF02810 SEC-C motif 852 869 2.2E-9 T 20-04-2016 IPR004027 SEC-C motif APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF81767 228 357 1.44E-41 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PANTHER PTHR30612 23 509 0.0 T 20-04-2016 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PANTHER PTHR30612 545 873 0.0 T 20-04-2016 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 811 0.0 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 171 191 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 402 415 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 64 88 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 118 128 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 365 382 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 102 116 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 328 350 7.3E-66 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:1.10.3060.10 643 825 5.1E-35 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF07517 SecA DEAD-like domain 17 390 4.7E-126 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF52540 357 404 3.86E-77 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF01043 SecA preprotein cross-linking domain 234 347 7.0E-36 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.10.450.50 844 870 9.6E-10 T 20-04-2016 IPR032710 NTF2-like domain APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SMART SM00957 5 391 1.8E-279 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SMART SM00958 229 347 7.6E-70 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.90.1440.10 231 357 3.4E-43 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 827 19.319 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.40.50.300 406 614 3.3E-90 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF07516 SecA Wing and Scaffold domain 612 824 1.2E-50 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.40.50.300 358 405 1.3E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.40.50.300 17 229 1.3E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 ProSitePatterns PS01312 SecA family signature. 489 504 - T 20-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APH_RS04730 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF52540 20 229 3.86E-77 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04300 cb37c17a09902f5e1770d2a10ef5d4eb 224 SUPERFAMILY SSF56925 133 212 8.89E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04300 cb37c17a09902f5e1770d2a10ef5d4eb 224 Gene3D G3DSA:2.40.160.20 139 208 1.7E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04300 cb37c17a09902f5e1770d2a10ef5d4eb 224 Pfam PF01617 Surface antigen 104 221 1.4E-41 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 14 297 1.3E-77 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 Gene3D G3DSA:2.40.30.30 185 300 9.0E-39 T 20-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 Pfam PF06574 FAD synthetase 9 161 1.5E-45 T 20-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 PANTHER PTHR22749:SF0 9 300 1.8E-101 T 20-04-2016 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 PIRSF PIRSF004491 2 303 3.5E-100 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 SUPERFAMILY SSF82114 170 300 9.37E-44 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 SUPERFAMILY SSF52374 13 171 2.03E-31 T 20-04-2016 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 PANTHER PTHR22749 9 300 1.8E-101 T 20-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 SMART SM00904 179 303 7.9E-57 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 Gene3D G3DSA:3.40.50.620 9 182 9.1E-55 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS04655 7f97515fe2e10ea20c51faafa52c69c5 303 Pfam PF01687 Riboflavin kinase 180 300 1.0E-36 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APH_RS00125 2e87ded111972b414858359df4ac5e9d 321 Hamap MF_00568 Quinolinate synthase A [nadA]. 6 312 42.558 T 20-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APH_RS00125 2e87ded111972b414858359df4ac5e9d 321 Pfam PF02445 Quinolinate synthetase A protein 11 310 1.9E-111 T 20-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APH_RS00125 2e87ded111972b414858359df4ac5e9d 321 SUPERFAMILY SSF142754 7 312 3.01E-111 T 20-04-2016 APH_RS00125 2e87ded111972b414858359df4ac5e9d 321 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 7 313 6.3E-106 T 20-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APH_RS00125 2e87ded111972b414858359df4ac5e9d 321 PANTHER PTHR30573 1 317 5.7E-129 T 20-04-2016 APH_RS03185 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 Pfam PF13177 DNA polymerase III, delta subunit 15 145 1.8E-24 T 20-04-2016 APH_RS03185 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 PANTHER PTHR11669 1 170 2.7E-30 T 20-04-2016 APH_RS03185 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 SMART SM00382 19 145 4.1E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS03185 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 PANTHER PTHR11669:SF8 1 170 2.7E-30 T 20-04-2016 APH_RS03185 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 Gene3D G3DSA:3.40.50.300 12 142 3.7E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03185 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 SUPERFAMILY SSF52540 14 169 2.87E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 PANTHER PTHR11895:SF7 2 488 9.0E-198 T 20-04-2016 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 Pfam PF01425 Amidase 26 470 4.0E-132 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 15 480 7.7E-161 T 20-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 Gene3D G3DSA:3.90.1300.10 3 482 1.8E-160 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 13 482 82.243 T 20-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 ProSitePatterns PS00571 Amidases signature. 156 187 - T 20-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 PANTHER PTHR11895 2 488 9.0E-198 T 20-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS03080 baf47c2856379b6db7c4be33a295e0b6 491 SUPERFAMILY SSF75304 4 482 6.15E-141 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 5 189 5.6E-63 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 SUPERFAMILY SSF52540 4 192 7.66E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 PANTHER PTHR11649:SF58 15 191 1.1E-42 T 20-04-2016 APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 PANTHER PTHR11649 15 191 1.1E-42 T 20-04-2016 APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 Gene3D G3DSA:3.40.50.300 11 191 1.6E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 8 193 24.681 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APH_RS01860 ddc40b7ed76c235d141d466c29b9260c 193 Pfam PF01926 50S ribosome-binding GTPase 23 141 3.5E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS00465 530299b0ae8e7bb7992cd3dcbe45a45d 227 Pfam PF13462 Thioredoxin 52 218 3.7E-46 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00465 530299b0ae8e7bb7992cd3dcbe45a45d 227 Gene3D G3DSA:3.40.30.10 48 139 1.5E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00465 530299b0ae8e7bb7992cd3dcbe45a45d 227 SUPERFAMILY SSF52833 47 218 5.47E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00465 530299b0ae8e7bb7992cd3dcbe45a45d 227 PANTHER PTHR13887:SF14 38 219 2.9E-28 T 20-04-2016 APH_RS00465 530299b0ae8e7bb7992cd3dcbe45a45d 227 PANTHER PTHR13887 38 219 2.9E-28 T 20-04-2016 APH_RS00465 530299b0ae8e7bb7992cd3dcbe45a45d 227 Gene3D G3DSA:3.40.30.10 153 223 5.0E-6 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 325 8.8E-28 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 PANTHER PTHR13779:SF25 1 325 1.1E-141 T 20-04-2016 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 325 3.0E-26 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 326 9.6E-128 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 SUPERFAMILY SSF52540 22 249 1.73E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 SUPERFAMILY SSF46785 259 325 7.07E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 Gene3D G3DSA:3.40.50.300 23 178 5.5E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 237 3.9E-107 T 20-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 PANTHER PTHR13779 1 325 1.1E-141 T 20-04-2016 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 Gene3D G3DSA:1.10.8.60 185 257 3.1E-26 T 20-04-2016 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 331 142.083 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 SMART SM00382 53 184 7.5E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS00745 5019dcd5ef5fbe14a214de811edafc44 331 Gene3D G3DSA:1.10.10.10 259 325 3.2E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS05500 cc5c38298e3a4200693bc54e378e7f3e 276 Gene3D G3DSA:2.40.160.20 170 262 3.5E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05500 cc5c38298e3a4200693bc54e378e7f3e 276 Pfam PF01617 Surface antigen 161 273 1.1E-40 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05500 cc5c38298e3a4200693bc54e378e7f3e 276 SUPERFAMILY SSF56925 187 266 1.99E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01505 5f94872f9c7e53a8c3d76772778b09f1 105 PANTHER PTHR34583 5 103 1.3E-21 T 20-04-2016 APH_RS01505 5f94872f9c7e53a8c3d76772778b09f1 105 PANTHER PTHR34583:SF2 5 103 1.3E-21 T 20-04-2016 APH_RS01505 5f94872f9c7e53a8c3d76772778b09f1 105 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 103 2.3E-17 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APH_RS04965 b669c1755847ca0c7c1db5c9c2b044cc 82 Pfam PF01617 Surface antigen 10 82 1.1E-22 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04965 b669c1755847ca0c7c1db5c9c2b044cc 82 Gene3D G3DSA:2.40.160.20 10 82 8.5E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 SMART SM00843 432 494 1.5E-26 T 20-04-2016 IPR018541 FtsK gamma domain APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 Pfam PF01580 FtsK/SpoIIIE family 111 330 2.4E-62 T 20-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 Gene3D G3DSA:3.40.50.300 88 395 1.0E-88 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 PANTHER PTHR22683:SF41 3 492 4.3E-218 T 20-04-2016 APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 Pfam PF09397 Ftsk gamma domain 434 493 7.3E-23 T 20-04-2016 IPR018541 FtsK gamma domain APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 SUPERFAMILY SSF46785 433 493 1.77E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 SUPERFAMILY SSF52540 126 401 1.36E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03770 850c6bbe5c5dd0fc1c0f2260ddb0120e 494 PANTHER PTHR22683 3 492 4.3E-218 T 20-04-2016 APH_RS03980 ea648052605305ea6ab1c98650cc2e67 90 PIRSF PIRSF003113 1 90 1.5E-17 T 20-04-2016 IPR002634 BolA protein APH_RS03980 ea648052605305ea6ab1c98650cc2e67 90 SUPERFAMILY SSF82657 4 88 8.11E-17 T 20-04-2016 IPR002634 BolA protein APH_RS03980 ea648052605305ea6ab1c98650cc2e67 90 Gene3D G3DSA:3.30.70.1500 4 80 1.2E-17 T 20-04-2016 APH_RS03980 ea648052605305ea6ab1c98650cc2e67 90 Pfam PF01722 BolA-like protein 13 87 1.3E-17 T 20-04-2016 IPR002634 BolA protein APH_RS05710 28d234aab531fb0dae73f05934419b1b 740 PANTHER PTHR37937:SF1 20 573 7.9E-62 T 20-04-2016 APH_RS05710 28d234aab531fb0dae73f05934419b1b 740 PANTHER PTHR37937 20 573 7.9E-62 T 20-04-2016 APH_RS05710 28d234aab531fb0dae73f05934419b1b 740 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 123 566 1.2E-150 T 20-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 APH_RS05710 28d234aab531fb0dae73f05934419b1b 740 Gene3D G3DSA:3.40.50.300 116 224 9.6E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05710 28d234aab531fb0dae73f05934419b1b 740 Gene3D G3DSA:3.40.50.300 354 553 9.6E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05710 28d234aab531fb0dae73f05934419b1b 740 SUPERFAMILY SSF52540 117 556 1.75E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF11638 DnaA N-terminal domain 13 72 2.8E-17 T 20-04-2016 IPR024633 DnaA N-terminal domain APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:1.10.1750.10 360 458 1.7E-35 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:1.10.8.60 292 359 4.6E-29 T 20-04-2016 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 10 459 31.268 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 SUPERFAMILY SSF48295 355 458 6.54E-35 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 13 458 1.7E-164 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PANTHER PTHR30050 13 459 5.7E-180 T 20-04-2016 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PANTHER PTHR30050:SF2 13 459 5.7E-180 T 20-04-2016 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 SUPERFAMILY SSF52540 122 337 2.54E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 SMART SM00382 157 285 4.2E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 437 4.3E-28 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:3.40.50.300 115 288 8.1E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 SMART SM00760 368 437 1.6E-38 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 190 204 4.2E-47 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 222 236 4.2E-47 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 256 283 4.2E-47 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 418 437 4.2E-47 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 158 178 4.2E-47 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 ProSitePatterns PS01008 DnaA protein signature. 418 437 - T 20-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APH_RS02090 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF00308 Bacterial dnaA protein 123 341 3.9E-86 T 20-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APH_RS02560 1fc2552389bef262f6b63ab0529eea37 392 Gene3D G3DSA:1.10.3860.10 12 382 1.0E-22 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS02560 1fc2552389bef262f6b63ab0529eea37 392 SUPERFAMILY SSF118215 11 380 3.53E-45 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS02560 1fc2552389bef262f6b63ab0529eea37 392 Pfam PF00375 Sodium:dicarboxylate symporter family 12 381 2.7E-35 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 PANTHER PTHR30008 5 370 3.2E-111 T 20-04-2016 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 370 21.526 T 20-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 PANTHER PTHR30008:SF0 5 370 3.2E-111 T 20-04-2016 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 Pfam PF02601 Exonuclease VII, large subunit 296 365 1.0E-9 T 20-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 Pfam PF02601 Exonuclease VII, large subunit 100 297 1.8E-70 T 20-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 Pfam PF13742 OB-fold nucleic acid binding domain 4 76 9.5E-19 T 20-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APH_RS05370 0434ab2308d7cb03168d3cde0342301e 370 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 4 368 3.7E-120 T 20-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 6.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 6.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 6.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PANTHER PTHR24423:SF382 213 469 6.5E-83 T 20-04-2016 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PANTHER PTHR24423:SF382 153 172 6.5E-83 T 20-04-2016 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 SMART SM00388 234 303 1.1E-22 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 SMART SM00387 349 461 9.3E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 Gene3D G3DSA:3.30.565.10 289 463 1.3E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 SUPERFAMILY SSF47384 220 304 1.63E-20 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 302 4.0E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PANTHER PTHR24423 213 469 6.5E-83 T 20-04-2016 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 PANTHER PTHR24423 153 172 6.5E-83 T 20-04-2016 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 Gene3D G3DSA:1.10.287.130 227 288 1.7E-18 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 4.7E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03745 cc36764b79f7a93097681ddc0ceb5389 470 SUPERFAMILY SSF55874 292 460 6.16E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS05030 a027bfdacd376460640c58470f27768d 412 PANTHER PTHR11766 4 404 8.9E-155 T 20-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APH_RS05030 a027bfdacd376460640c58470f27768d 412 Gene3D G3DSA:3.40.50.620 4 232 4.6E-91 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS05030 a027bfdacd376460640c58470f27768d 412 Gene3D G3DSA:1.10.240.10 233 314 3.4E-33 T 20-04-2016 APH_RS05030 a027bfdacd376460640c58470f27768d 412 Gene3D G3DSA:3.10.290.10 315 410 4.3E-16 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APH_RS05030 a027bfdacd376460640c58470f27768d 412 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 408 3.7E-102 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APH_RS05030 a027bfdacd376460640c58470f27768d 412 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 5 410 39.646 T 20-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APH_RS05030 a027bfdacd376460640c58470f27768d 412 SUPERFAMILY SSF55174 339 410 1.81E-10 T 20-04-2016 APH_RS05030 a027bfdacd376460640c58470f27768d 412 SUPERFAMILY SSF52374 6 321 1.69E-94 T 20-04-2016 APH_RS05030 a027bfdacd376460640c58470f27768d 412 Pfam PF00579 tRNA synthetases class I (W and Y) 33 321 8.0E-70 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS05030 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 4.35E-25 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APH_RS05030 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 4.35E-25 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APH_RS05030 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 4.35E-25 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APH_RS05030 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 4.35E-25 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APH_RS05030 a027bfdacd376460640c58470f27768d 412 PANTHER PTHR11766:SF0 4 404 8.9E-155 T 20-04-2016 APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.1E-10 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.1E-10 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.1E-10 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 SMART SM01403 7 101 1.7E-42 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 Pfam PF00338 Ribosomal protein S10p/S20e 8 101 4.0E-29 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 PANTHER PTHR11700 1 102 1.4E-36 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 SUPERFAMILY SSF54999 5 102 1.96E-31 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.218 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 Gene3D G3DSA:3.30.70.600 4 102 1.8E-36 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APH_RS01215 967673b771cbe79c17dac2c1caa24f13 105 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-36 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APH_RS01365 75fb8811c398f633a48e81e921ad1136 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 20-04-2016 IPR030470 UbiA prenyltransferase conserved site APH_RS01365 75fb8811c398f633a48e81e921ad1136 292 Pfam PF01040 UbiA prenyltransferase family 31 272 1.1E-50 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APH_RS01365 75fb8811c398f633a48e81e921ad1136 292 PANTHER PTHR11048:SF28 14 291 3.1E-69 T 20-04-2016 APH_RS01365 75fb8811c398f633a48e81e921ad1136 292 PANTHER PTHR11048 14 291 3.1E-69 T 20-04-2016 APH_RS01365 75fb8811c398f633a48e81e921ad1136 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 7 291 23.274 T 20-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.30.1490.20 119 188 9.4E-27 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 SUPERFAMILY SSF51246 326 417 6.28E-25 T 20-04-2016 IPR011054 Rudiment single hybrid motif APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.4E-30 T 20-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 SUPERFAMILY SSF52440 1 100 6.62E-30 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.40.50.20 2 93 1.7E-31 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 20-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.3E-69 T 20-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 417 1.0E-144 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.30.470.20 189 322 1.6E-49 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 SUPERFAMILY SSF56059 102 319 3.37E-55 T 20-04-2016 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 PANTHER PTHR10520 1 417 8.1E-207 T 20-04-2016 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 SMART SM01210 327 417 1.8E-38 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 SMART SM01209 101 293 9.1E-112 T 20-04-2016 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 417 1.5E-25 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 36.438 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS04330 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.90.600.10 328 417 3.3E-31 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 SUPERFAMILY SSF158791 8 133 4.84E-20 T 20-04-2016 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 SUPERFAMILY SSF54631 136 266 9.85E-24 T 20-04-2016 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF00571 CBS domain 200 255 1.1E-6 T 20-04-2016 IPR000644 CBS domain APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF00571 CBS domain 136 192 0.0051 T 20-04-2016 IPR000644 CBS domain APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF01769 Divalent cation transporter 319 441 3.3E-21 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Gene3D G3DSA:1.10.357.20 276 447 3.1E-44 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF03448 MgtE intracellular N domain 37 134 2.4E-16 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 SUPERFAMILY SSF161093 276 447 2.35E-41 T 20-04-2016 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Gene3D G3DSA:3.10.580.10 128 261 1.3E-20 T 20-04-2016 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 Gene3D G3DSA:1.25.60.10 8 127 1.1E-15 T 20-04-2016 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 447 2.0E-78 T 20-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 PANTHER PTHR41394 7 447 2.0E-27 T 20-04-2016 APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 SMART SM00116 207 255 7.2E-7 T 20-04-2016 IPR000644 CBS domain APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 SMART SM00116 143 196 54.0 T 20-04-2016 IPR000644 CBS domain APH_RS02170 2e983d03492df28a56f1c19fe027ff70 448 SMART SM00924 33 136 5.2E-22 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.3E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 7.3E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 7.3E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.3E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 7.3E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 7.3E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 Gene3D G3DSA:3.30.420.40 5 158 1.9E-41 T 20-04-2016 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PANTHER PTHR11735:SF6 6 341 7.7E-137 T 20-04-2016 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 Pfam PF00814 Glycoprotease family 25 313 2.3E-90 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 312 3.9E-99 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 SUPERFAMILY SSF53067 5 316 8.64E-41 T 20-04-2016 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 319 3.4E-122 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 338 58.101 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APH_RS02620 65505f3de958c15372ce2eeb27d08875 342 PANTHER PTHR11735 6 341 7.7E-137 T 20-04-2016 APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 PANTHER PTHR24220 5 236 1.6E-85 T 20-04-2016 APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 32 45 - T 20-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 SUPERFAMILY SSF52540 4 227 3.19E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 Gene3D G3DSA:3.40.50.300 3 233 2.8E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 SMART SM00382 28 212 2.6E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 Pfam PF00005 ABC transporter 19 164 7.0E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS00020 cc3dbe2961977f97f6711f17222f7271 241 PANTHER PTHR24220:SF567 5 236 1.6E-85 T 20-04-2016 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 Gene3D G3DSA:3.40.140.20 241 356 2.7E-39 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 SUPERFAMILY SSF52335 6 194 1.3E-56 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS04850 288999648c7f00bbe4e339983ba38990 512 SUPERFAMILY SSF53927 212 512 1.2E-111 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 PANTHER PTHR11692 4 512 5.4E-231 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 Gene3D G3DSA:3.40.50.1380 3 187 4.5E-68 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS04850 288999648c7f00bbe4e339983ba38990 512 Gene3D G3DSA:3.40.140.20 368 502 1.6E-50 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 512 3.4E-165 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 PIRSF PIRSF000414 1 512 7.3E-193 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 Pfam PF02142 MGS-like domain 19 130 4.3E-19 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS04850 288999648c7f00bbe4e339983ba38990 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 447 5.5E-103 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 SMART SM00851 18 131 5.2E-42 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APH_RS04850 288999648c7f00bbe4e339983ba38990 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 6 512 38.453 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 SMART SM00798 136 448 1.0E-150 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APH_RS04850 288999648c7f00bbe4e339983ba38990 512 PANTHER PTHR11692:SF2 4 512 5.4E-231 T 20-04-2016 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 119 2.0E-40 T 20-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 SUPERFAMILY SSF50193 1 118 1.11E-40 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 ProSitePatterns PS00049 Ribosomal protein L14 signature. 58 84 - T 20-04-2016 IPR019972 Ribosomal protein L14P, conserved site APH_RS01270 3ec739cae251f553c41c720362e64c15 119 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 119 24.136 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 PANTHER PTHR11761:SF3 1 119 3.3E-50 T 20-04-2016 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 SMART SM01374 1 119 1.6E-58 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 PANTHER PTHR11761 1 119 3.3E-50 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 Pfam PF00238 Ribosomal protein L14p/L23e 1 119 2.8E-41 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_RS01270 3ec739cae251f553c41c720362e64c15 119 Gene3D G3DSA:2.40.150.20 1 119 5.4E-41 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_RS02360 0315a028e86386607c6f2ef28fc2ada5 256 Gene3D G3DSA:3.30.540.10 7 140 2.6E-21 T 20-04-2016 APH_RS02360 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 5.5E-7 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APH_RS02360 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 5.5E-7 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APH_RS02360 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 5.5E-7 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APH_RS02360 0315a028e86386607c6f2ef28fc2ada5 256 Pfam PF00459 Inositol monophosphatase family 43 211 1.5E-13 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APH_RS02360 0315a028e86386607c6f2ef28fc2ada5 256 SUPERFAMILY SSF56655 6 249 4.32E-32 T 20-04-2016 APH_RS00200 1c58fe5dcdfed9b986c119b5f6028295 908 Pfam PF13502 AsmA-like C-terminal region 677 849 1.0E-7 T 20-04-2016 IPR032712 AsmA-like, C-terminal APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 SUPERFAMILY SSF54292 1 104 4.07E-30 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 20-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 PANTHER PTHR23426 4 113 9.9E-50 T 20-04-2016 APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 PRINTS PR00355 Adrenodoxin signature 84 92 8.2E-5 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 PRINTS PR00355 Adrenodoxin signature 39 49 8.2E-5 T 20-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 93 2.8E-12 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APH_RS02830 e569bff8cd3fd8c3affade80d7fa3bcc 116 Gene3D G3DSA:3.10.20.30 1 104 1.2E-40 T 20-04-2016 IPR012675 Beta-grasp domain APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 Pfam PF02033 Ribosome-binding factor A 11 112 8.8E-20 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 Gene3D G3DSA:3.30.300.20 9 116 1.2E-23 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 PANTHER PTHR33515 11 114 5.1E-14 T 20-04-2016 APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 100 6.0E-30 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 114 1.7E-16 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 SUPERFAMILY SSF89919 10 115 1.83E-23 T 20-04-2016 IPR023799 Ribosome-binding factor A domain APH_RS01990 6d0d338c77d30c01a9f547803cc42029 118 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 20-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APH_RS05135 c292029b72bb8bc66e4c2c6c9595e438 275 PANTHER PTHR22602 6 205 3.7E-47 T 20-04-2016 APH_RS05135 c292029b72bb8bc66e4c2c6c9595e438 275 SUPERFAMILY SSF103025 4 208 5.49E-46 T 20-04-2016 APH_RS05135 c292029b72bb8bc66e4c2c6c9595e438 275 PANTHER PTHR22602:SF0 6 205 3.7E-47 T 20-04-2016 APH_RS05135 c292029b72bb8bc66e4c2c6c9595e438 275 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 153 215 8.3E-20 T 20-04-2016 IPR017703 YgfZ/GcvT conserved site APH_RS05135 c292029b72bb8bc66e4c2c6c9595e438 275 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 91 5.3E-11 T 20-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APH_RS05135 c292029b72bb8bc66e4c2c6c9595e438 275 Gene3D G3DSA:3.30.70.1400 7 91 7.0E-21 T 20-04-2016 APH_RS04170 cea5918c120c293b7610cc2dae061860 91 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 56 2.4E-9 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APH_RS04170 cea5918c120c293b7610cc2dae061860 91 Pfam PF01165 Ribosomal protein S21 3 54 1.1E-9 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APH_RS04170 cea5918c120c293b7610cc2dae061860 91 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 12.33 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 PANTHER PTHR10174:SF2 67 336 2.5E-36 T 20-04-2016 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 PIRSF PIRSF000148 2 337 7.4E-94 T 20-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 Gene3D G3DSA:3.30.360.10 145 315 7.7E-53 T 20-04-2016 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 PANTHER PTHR10174 67 336 2.5E-36 T 20-04-2016 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 SUPERFAMILY SSF51735 5 158 1.82E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 SMART SM00859 4 120 3.1E-8 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 SUPERFAMILY SSF55347 132 317 6.83E-53 T 20-04-2016 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 Gene3D G3DSA:3.40.50.720 5 144 3.2E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 317 3.4E-31 T 20-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APH_RS05475 cb8ee6693e8cd25c6f00b588dd642e8c 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 115 3.4E-18 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 Gene3D G3DSA:2.40.160.20 100 162 5.2E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 Gene3D G3DSA:2.40.160.20 308 424 5.2E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 Gene3D G3DSA:2.40.160.20 43 60 5.2E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 SUPERFAMILY SSF56925 308 424 6.54E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 SUPERFAMILY SSF56925 103 134 6.54E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 SUPERFAMILY SSF56925 43 61 6.54E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02770 619cef350c4ac4c960c12c7d7a6c47fe 424 Pfam PF01617 Surface antigen 43 424 6.4E-75 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 1587 1613 1.84E-24 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 1323 1430 1.84E-24 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 1897 2005 1.84E-24 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 1136 1163 1.84E-24 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 PANTHER PTHR24198 1326 1402 9.6E-28 T 20-04-2016 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 PANTHER PTHR24198 1912 2005 9.6E-28 T 20-04-2016 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 PANTHER PTHR24198 69 188 9.6E-28 T 20-04-2016 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 69 265 9.1E-14 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 164 193 0.46 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 1333 1362 6.4E-5 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 550 579 59.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 1366 1401 4100.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 126 159 550.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 789 820 77.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 1174 1208 3500.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 52 88 4600.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 205 239 3900.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 1947 1988 0.022 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 1914 1943 350.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SMART SM00248 1590 1620 8.6 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 784 850 4.3E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 1320 1426 4.3E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 1125 1152 4.3E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 522 577 4.3E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 1907 2005 4.3E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 Gene3D G3DSA:1.25.40.20 1578 1615 4.3E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 18 264 2.1E-12 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 741 891 3.26E-8 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS02940 56ce4785c45ce5c7620c056b41fa1eec 3378 SUPERFAMILY SSF48403 525 570 3.26E-8 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS04155 c3ae023e0a0fbea427f98c1ae3427f26 338 PANTHER PTHR32332:SF20 4 335 3.1E-73 T 20-04-2016 APH_RS04155 c3ae023e0a0fbea427f98c1ae3427f26 338 SUPERFAMILY SSF51412 13 330 8.7E-50 T 20-04-2016 APH_RS04155 c3ae023e0a0fbea427f98c1ae3427f26 338 PANTHER PTHR32332 4 335 3.1E-73 T 20-04-2016 APH_RS04155 c3ae023e0a0fbea427f98c1ae3427f26 338 Gene3D G3DSA:3.20.20.70 13 322 9.2E-52 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS04155 c3ae023e0a0fbea427f98c1ae3427f26 338 Pfam PF03060 Nitronate monooxygenase 10 327 1.1E-46 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 Pfam PF03952 Enolase, N-terminal domain 10 140 1.1E-54 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 Hamap MF_00318 Enolase [eno]. 8 415 42.65 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 SMART SM01192 145 429 6.0E-187 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 Gene3D G3DSA:3.30.390.10 9 132 6.4E-50 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 367 384 3.9E-42 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 338 352 3.9E-42 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 43 57 3.9E-42 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 315 326 3.9E-42 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 167 180 3.9E-42 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 113 129 3.9E-42 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 10 421 1.7E-187 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 SMART SM01193 10 140 2.5E-82 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 SUPERFAMILY SSF51604 146 423 3.82E-116 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 148 421 1.3E-112 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PANTHER PTHR11902 10 415 4.0E-218 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 SUPERFAMILY SSF54826 9 143 1.15E-51 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 Gene3D G3DSA:3.20.20.120 134 421 2.7E-120 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 PIRSF PIRSF001400 6 428 1.2E-179 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS02890 d618def85a108c2a0abd7e696e0c02d8 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 20-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04563 RNA polymerase beta subunit 37 519 9.0E-22 T 20-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 SUPERFAMILY SSF64484 1070 1375 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 SUPERFAMILY SSF64484 368 963 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 SUPERFAMILY SSF64484 29 250 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.30.150.10 617 681 4.5E-23 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1094 1106 - T 20-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.50.100 740 816 6.0E-28 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1100.10 34 175 1.2E-135 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1100.10 684 738 1.2E-135 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1100.10 470 616 1.2E-135 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1110.10 371 469 8.8E-63 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1110.10 177 254 8.8E-63 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 538 606 1.3E-31 T 20-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.50.150 851 961 4.1E-44 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.50.150 1076 1090 4.1E-44 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 742 1295 1.9E-148 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 33 1370 0.0 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 616 681 1.4E-21 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.270.10 1091 1274 3.8E-83 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.270.10 817 844 3.8E-83 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 382 479 2.0E-20 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 175 247 3.3E-9 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1372 1.7E-24 T 20-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856:SF20 365 750 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856:SF20 36 255 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856:SF20 1064 1159 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856:SF20 767 954 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856:SF20 1214 1378 0.0 T 20-04-2016 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 22 1374 11.762 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856 365 750 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856 36 255 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856 1064 1159 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856 767 954 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS04060 03dae8b91af1bf17f97079e60190a3c3 1383 PANTHER PTHR20856 1214 1378 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APH_RS05575 8946f2e496b9453967279b058b818cda 241 SUPERFAMILY SSF69593 13 238 2.09E-33 T 20-04-2016 APH_RS05575 8946f2e496b9453967279b058b818cda 241 Gene3D G3DSA:3.40.1130.10 66 217 1.1E-17 T 20-04-2016 APH_RS05575 8946f2e496b9453967279b058b818cda 241 PANTHER PTHR10434 10 241 4.2E-41 T 20-04-2016 APH_RS05575 8946f2e496b9453967279b058b818cda 241 SMART SM00563 73 189 1.4E-26 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APH_RS05575 8946f2e496b9453967279b058b818cda 241 Pfam PF01553 Acyltransferase 61 186 1.8E-19 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APH_RS01845 ea199d9295f50892de2ed233a5ad0355 371 Gene3D G3DSA:3.40.50.300 125 173 2.2E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01845 ea199d9295f50892de2ed233a5ad0355 371 Gene3D G3DSA:3.40.50.300 18 89 2.2E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01845 ea199d9295f50892de2ed233a5ad0355 371 Gene3D G3DSA:3.40.50.300 213 278 2.2E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01845 ea199d9295f50892de2ed233a5ad0355 371 SMART SM00382 16 274 2.5E-5 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01845 ea199d9295f50892de2ed233a5ad0355 371 SUPERFAMILY SSF52540 4 324 9.15E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 225 1.3E-35 T 20-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 SUPERFAMILY SSF55347 124 260 1.5E-51 T 20-04-2016 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 Gene3D G3DSA:1.10.1740.10 298 382 9.5E-23 T 20-04-2016 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 SUPERFAMILY SSF51735 2 148 1.38E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 PANTHER PTHR30525 1 385 1.6E-146 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 PIRSF PIRSF006205 1 385 8.8E-125 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 371 5.3E-33 T 20-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 SUPERFAMILY SSF69055 288 382 3.66E-26 T 20-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 Gene3D G3DSA:3.40.50.720 2 148 2.2E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 1.5E-26 T 20-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 3.1E-111 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01955 7ac879babd7c1e9e1f78278d03e7a7e2 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 380 38.953 T 20-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 9 20 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 Pfam PF00318 Ribosomal protein S2 12 228 2.4E-89 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 Gene3D G3DSA:1.10.287.610 105 156 6.6E-19 T 20-04-2016 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 5 246 39.232 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 PANTHER PTHR12534 4 230 8.1E-106 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 8 228 1.7E-93 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 Gene3D G3DSA:3.40.50.10490 162 231 9.9E-62 T 20-04-2016 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 Gene3D G3DSA:3.40.50.10490 26 104 9.9E-62 T 20-04-2016 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 162 186 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 SUPERFAMILY SSF52313 9 231 2.09E-87 T 20-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 200 214 2.2E-34 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 92 109 2.2E-34 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 179 190 2.2E-34 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 162 179 2.2E-34 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01750 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 9 27 2.2E-34 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 Gene3D G3DSA:1.10.8.50 131 268 6.2E-44 T 20-04-2016 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 SUPERFAMILY SSF46946 131 220 4.32E-24 T 20-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 20-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 SMART SM00898 2 116 1.7E-41 T 20-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 217 2.2E-21 T 20-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 Pfam PF06827 Zinc finger found in FPG and IleRS 240 268 1.1E-8 T 20-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 SUPERFAMILY SSF57716 216 268 5.99E-15 T 20-04-2016 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 SUPERFAMILY SSF81624 2 139 1.96E-35 T 20-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 Gene3D G3DSA:3.20.190.10 2 130 2.6E-35 T 20-04-2016 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 SMART SM01232 130 220 4.2E-38 T 20-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 PANTHER PTHR22993 1 268 1.9E-95 T 20-04-2016 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 267 3.6E-82 T 20-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 PANTHER PTHR22993:SF15 1 268 1.9E-95 T 20-04-2016 APH_RS01825 d049a31926a0faf336d8c61aa07caf09 268 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.0E-33 T 20-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 Gene3D G3DSA:2.40.50.140 1 122 9.8E-61 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 SUPERFAMILY SSF50249 2 122 1.71E-48 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 124 37.765 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PIRSF PIRSF002133 1 124 6.9E-52 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 111 123 1.69E-54 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 95 111 1.69E-54 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 78 95 1.69E-54 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 59 78 1.69E-54 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.69E-54 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.69E-54 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 PANTHER PTHR11652 1 117 4.5E-65 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 122 5.7E-62 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APH_RS04115 1a9a8e5e3fc91432e5a1569a566732af 124 Pfam PF00164 Ribosomal protein S12/S23 11 122 2.5E-39 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02325 8520eb3f9e4ecd2020ab4973f135f74f 122 PANTHER PTHR12428 24 117 2.4E-21 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02325 8520eb3f9e4ecd2020ab4973f135f74f 122 Pfam PF02096 60Kd inner membrane protein 51 118 2.0E-17 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02325 8520eb3f9e4ecd2020ab4973f135f74f 122 Pfam PF14849 YidC periplasmic domain 1 39 4.8E-7 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal APH_RS02325 8520eb3f9e4ecd2020ab4973f135f74f 122 PANTHER PTHR12428:SF14 24 117 2.4E-21 T 20-04-2016 APH_RS01745 f4bad6f9c65e99b383682b99f60caffb 196 Gene3D G3DSA:3.90.950.10 5 187 4.3E-56 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APH_RS01745 f4bad6f9c65e99b383682b99f60caffb 196 SUPERFAMILY SSF52972 3 187 4.58E-53 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APH_RS01745 f4bad6f9c65e99b383682b99f60caffb 196 Hamap MF_00528 Septum formation protein Maf [maf]. 6 193 26.54 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APH_RS01745 f4bad6f9c65e99b383682b99f60caffb 196 PIRSF PIRSF006305 1 193 6.0E-46 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APH_RS01745 f4bad6f9c65e99b383682b99f60caffb 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 186 1.9E-40 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APH_RS01745 f4bad6f9c65e99b383682b99f60caffb 196 Pfam PF02545 Maf-like protein 7 187 2.5E-46 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 PIRSF PIRSF000497 5 389 6.7E-144 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 Pfam PF02772 S-adenosylmethionine synthetase, central domain 121 236 1.4E-31 T 20-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 SUPERFAMILY SSF55973 117 237 1.61E-37 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 13 381 1.3E-134 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 378 8.1E-60 T 20-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 11 107 1.5E-30 T 20-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 SUPERFAMILY SSF55973 10 117 7.85E-32 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 Gene3D G3DSA:3.30.300.10 139 238 5.5E-26 T 20-04-2016 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 SUPERFAMILY SSF55973 238 384 9.81E-60 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 PANTHER PTHR11964 9 384 3.3E-154 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 Gene3D G3DSA:3.30.300.10 249 383 2.3E-57 T 20-04-2016 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 PANTHER PTHR11964:SF1 9 384 3.3E-154 T 20-04-2016 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APH_RS00040 ed429050b1cd268da1bb0972e44d6a4f 392 Gene3D G3DSA:3.30.300.10 18 138 5.9E-31 T 20-04-2016 APH_RS02945 66aba3fbf8d1c31c58db272f4a847586 340 PANTHER PTHR11432 1 337 6.2E-158 T 20-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APH_RS02945 66aba3fbf8d1c31c58db272f4a847586 340 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 44 59 - T 20-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APH_RS02945 66aba3fbf8d1c31c58db272f4a847586 340 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 213 226 - T 20-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APH_RS02945 66aba3fbf8d1c31c58db272f4a847586 340 Pfam PF00146 NADH dehydrogenase 6 325 2.5E-122 T 20-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APH_RS02945 66aba3fbf8d1c31c58db272f4a847586 340 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 2 332 23.947 T 20-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APH_RS02945 66aba3fbf8d1c31c58db272f4a847586 340 PANTHER PTHR11432:SF3 1 337 6.2E-158 T 20-04-2016 APH_RS04035 2430dbc0790dc7a3f83f1c7e43ccad70 250 Gene3D G3DSA:2.40.160.20 194 231 3.1E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04035 2430dbc0790dc7a3f83f1c7e43ccad70 250 Pfam PF01617 Surface antigen 165 238 1.2E-18 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 SUPERFAMILY SSF63411 252 442 1.27E-20 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 Pfam PF00675 Insulinase (Peptidase family M16) 42 178 9.7E-23 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 Gene3D G3DSA:3.30.830.10 23 237 5.6E-52 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 SUPERFAMILY SSF63411 23 233 1.63E-53 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 Pfam PF05193 Peptidase M16 inactive domain 190 372 1.1E-17 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 PANTHER PTHR11851 27 431 5.2E-72 T 20-04-2016 APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 PANTHER PTHR11851:SF136 27 431 5.2E-72 T 20-04-2016 APH_RS04645 5219d7c2824cf250e3f72da9da76585d 493 Gene3D G3DSA:3.30.830.10 257 441 4.7E-14 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APH_RS03160 33dae0b8a0ee4d70c8dd7b8688d6c95f 157 Pfam PF04386 Stringent starvation protein B 11 126 2.0E-24 T 20-04-2016 IPR007481 Stringent starvation protein B APH_RS03160 33dae0b8a0ee4d70c8dd7b8688d6c95f 157 Gene3D G3DSA:2.30.30.220 2 116 1.8E-39 T 20-04-2016 IPR007481 Stringent starvation protein B APH_RS03160 33dae0b8a0ee4d70c8dd7b8688d6c95f 157 SUPERFAMILY SSF101738 3 116 2.94E-37 T 20-04-2016 IPR007481 Stringent starvation protein B APH_RS00355 985442dac53d18139d05951a071ac9c5 182 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 181 1.3E-35 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APH_RS00355 985442dac53d18139d05951a071ac9c5 182 PANTHER PTHR18895:SF60 1 182 3.0E-21 T 20-04-2016 APH_RS00355 985442dac53d18139d05951a071ac9c5 182 Pfam PF03602 Conserved hypothetical protein 95 2 180 1.3E-38 T 20-04-2016 APH_RS00355 985442dac53d18139d05951a071ac9c5 182 Gene3D G3DSA:3.40.50.150 1 181 4.4E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS00355 985442dac53d18139d05951a071ac9c5 182 PANTHER PTHR18895 1 182 3.0E-21 T 20-04-2016 APH_RS00355 985442dac53d18139d05951a071ac9c5 182 PIRSF PIRSF004553 1 182 1.2E-48 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APH_RS00355 985442dac53d18139d05951a071ac9c5 182 SUPERFAMILY SSF53335 2 180 8.93E-36 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 Pfam PF05175 Methyltransferase small domain 115 193 3.8E-10 T 20-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 PANTHER PTHR18895 9 280 2.8E-64 T 20-04-2016 APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 PANTHER PTHR18895:SF64 9 280 2.8E-64 T 20-04-2016 APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 257 3.7E-52 T 20-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 SUPERFAMILY SSF53335 10 277 2.98E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 Gene3D G3DSA:1.10.8.10 7 89 2.5E-21 T 20-04-2016 APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 Gene3D G3DSA:3.40.50.150 91 279 8.7E-48 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_RS04820 5a00e6ee967d597ca75f9638867fa44a 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 276 3.9E-66 T 20-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APH_RS03960 551e7c0780ce579799e534af15c5f6ea 93 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 84 2.4E-12 T 20-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APH_RS03960 551e7c0780ce579799e534af15c5f6ea 93 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 47 60 - T 20-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 APH_RS03960 551e7c0780ce579799e534af15c5f6ea 93 SUPERFAMILY SSF81343 3 88 6.98E-13 T 20-04-2016 APH_RS03960 551e7c0780ce579799e534af15c5f6ea 93 Gene3D G3DSA:1.20.1300.10 2 87 5.3E-16 T 20-04-2016 APH_RS03960 551e7c0780ce579799e534af15c5f6ea 93 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 2 88 1.2E-20 T 20-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 APH_RS03960 551e7c0780ce579799e534af15c5f6ea 93 PIRSF PIRSF000178 1 91 3.6E-18 T 20-04-2016 APH_RS05465 31ff47e92ed2a45d8964bdeaa125df56 144 Gene3D G3DSA:3.40.50.300 13 143 5.0E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05465 31ff47e92ed2a45d8964bdeaa125df56 144 PANTHER PTHR33540:SF2 14 141 1.4E-24 T 20-04-2016 APH_RS05465 31ff47e92ed2a45d8964bdeaa125df56 144 PANTHER PTHR33540 14 141 1.4E-24 T 20-04-2016 APH_RS05465 31ff47e92ed2a45d8964bdeaa125df56 144 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 13 126 4.8E-25 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APH_RS05465 31ff47e92ed2a45d8964bdeaa125df56 144 SUPERFAMILY SSF52540 18 116 8.23E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05465 31ff47e92ed2a45d8964bdeaa125df56 144 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 14 127 3.1E-28 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APH_RS04710 b871b07eeac5ed4ab4fff59a04746eee 186 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 5 182 1.4E-52 T 20-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS04710 b871b07eeac5ed4ab4fff59a04746eee 186 Gene3D G3DSA:3.40.50.2020 4 166 1.1E-34 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS04710 b871b07eeac5ed4ab4fff59a04746eee 186 Pfam PF00156 Phosphoribosyl transferase domain 41 149 1.2E-9 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APH_RS04710 b871b07eeac5ed4ab4fff59a04746eee 186 PANTHER PTHR19278 1 166 1.1E-21 T 20-04-2016 APH_RS04710 b871b07eeac5ed4ab4fff59a04746eee 186 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 186 21.443 T 20-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS04710 b871b07eeac5ed4ab4fff59a04746eee 186 SUPERFAMILY SSF53271 3 142 6.95E-32 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS05790 5184290e6f37660fcae442310f985daf 166 PANTHER PTHR11109 14 109 5.1E-26 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS05790 5184290e6f37660fcae442310f985daf 166 Pfam PF01227 GTP cyclohydrolase I 18 109 6.1E-27 T 20-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS05790 5184290e6f37660fcae442310f985daf 166 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APH_RS05790 5184290e6f37660fcae442310f985daf 166 SUPERFAMILY SSF55620 12 164 7.34E-40 T 20-04-2016 APH_RS05790 5184290e6f37660fcae442310f985daf 166 Gene3D G3DSA:1.10.286.10 13 56 6.6E-18 T 20-04-2016 APH_RS05790 5184290e6f37660fcae442310f985daf 166 Gene3D G3DSA:3.30.1130.10 109 165 1.3E-9 T 20-04-2016 APH_RS05790 5184290e6f37660fcae442310f985daf 166 Gene3D G3DSA:3.30.1130.10 71 108 3.5E-13 T 20-04-2016 APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 PANTHER PTHR10681:SF114 4 194 5.6E-76 T 20-04-2016 APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 192 9.7E-10 T 20-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 Pfam PF00578 AhpC/TSA family 5 137 1.1E-28 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 PANTHER PTHR10681 4 194 5.6E-76 T 20-04-2016 APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 Gene3D G3DSA:3.40.30.10 4 192 1.8E-62 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 PIRSF PIRSF000239 1 198 2.4E-55 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APH_RS02760 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 SUPERFAMILY SSF52833 1 192 8.26E-57 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 SUPERFAMILY SSF75217 83 235 5.23E-40 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 10 235 2.4E-43 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 SUPERFAMILY SSF88697 10 75 2.14E-14 T 20-04-2016 IPR015947 PUA-like domain APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 PANTHER PTHR30027:SF3 10 237 1.4E-48 T 20-04-2016 APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 PIRSF PIRSF015601 9 239 6.8E-58 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 Gene3D G3DSA:3.40.1280.10 11 235 2.1E-60 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 PANTHER PTHR30027 10 237 1.4E-48 T 20-04-2016 APH_RS03215 4fdbe4b97720dd8d8ca05fb6ce693eed 239 Pfam PF04452 RNA methyltransferase 27 234 3.4E-54 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APH_RS04090 c3d577dabd58f63a220379e950764637 66 Gene3D G3DSA:1.20.5.1030 3 58 8.6E-13 T 20-04-2016 APH_RS04090 c3d577dabd58f63a220379e950764637 66 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 57 3.0E-11 T 20-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APH_RS04090 c3d577dabd58f63a220379e950764637 66 Hamap MF_00422 Protein translocase subunit SecE [secE]. 3 58 10.89 T 20-04-2016 IPR022943 Preprotein translocase subunit SecE APH_RS04090 c3d577dabd58f63a220379e950764637 66 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 60 1.4E-12 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 SUPERFAMILY SSF55307 20 135 2.98E-43 T 20-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 Pfam PF12327 FtsZ family, C-terminal domain 38 133 3.1E-39 T 20-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 SMART SM00865 23 141 2.4E-57 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 PANTHER PTHR30314:SF3 7 213 1.1E-68 T 20-04-2016 APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 PANTHER PTHR30314 7 213 1.1E-68 T 20-04-2016 APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 PRINTS PR00423 Cell division protein FtsZ signature 28 49 2.3E-20 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 PRINTS PR00423 Cell division protein FtsZ signature 5 27 2.3E-20 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 Gene3D G3DSA:3.40.50.1440 3 40 2.9E-9 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APH_RS00575 f0b8d09c2ab13a408498e2f9fe04240d 213 Gene3D G3DSA:3.30.1330.20 41 141 3.3E-42 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PANTHER PTHR24423 364 692 8.2E-51 T 20-04-2016 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PANTHER PTHR24423 95 116 8.2E-51 T 20-04-2016 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 SMART SM00388 481 552 8.8E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PANTHER PTHR24423:SF471 364 692 8.2E-51 T 20-04-2016 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PANTHER PTHR24423:SF471 95 116 8.2E-51 T 20-04-2016 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 662 1.6E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 681 1.6E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 648 1.6E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 550 1.2E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 SMART SM00387 592 700 1.1E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 PIRSF PIRSF037532 7 700 2.5E-173 T 20-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 SUPERFAMILY SSF55874 572 694 2.51E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 SUPERFAMILY SSF47384 477 552 5.49E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 Gene3D G3DSA:3.30.565.10 576 693 3.2E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 697 1.1E-15 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 Pfam PF00672 HAMP domain 290 360 3.7E-9 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 Gene3D G3DSA:1.10.287.130 477 548 5.8E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_RS00610 be0b358cd0f0a41304571a7e8fe02c93 700 SMART SM00304 309 364 1.9E-8 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 Gene3D G3DSA:3.50.50.60 9 177 3.8E-32 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 Gene3D G3DSA:3.50.50.60 264 352 3.8E-32 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 SUPERFAMILY SSF51905 272 388 8.46E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 SUPERFAMILY SSF51905 9 172 8.46E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 Pfam PF01494 FAD binding domain 149 308 3.3E-12 T 20-04-2016 IPR002938 FAD-binding domain GO:0071949 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 386 8.9E-98 T 20-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PANTHER PTHR13789:SF5 1 390 3.5E-78 T 20-04-2016 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 5.9E-14 T 20-04-2016 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 5.9E-14 T 20-04-2016 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 5.9E-14 T 20-04-2016 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 5.9E-14 T 20-04-2016 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PANTHER PTHR13789 1 390 3.5E-78 T 20-04-2016 APH_RS00050 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 290 303 - T 20-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 Pfam PF01872 RibD C-terminal domain 148 322 1.7E-33 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 Gene3D G3DSA:3.40.430.10 129 350 6.9E-54 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 Gene3D G3DSA:3.40.140.10 4 128 6.1E-32 T 20-04-2016 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 1.6E-18 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 PANTHER PTHR11079:SF10 4 222 5.5E-56 T 20-04-2016 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 SUPERFAMILY SSF53597 148 350 1.07E-46 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 SUPERFAMILY SSF53927 4 141 6.55E-44 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 PANTHER PTHR11079 4 222 5.5E-56 T 20-04-2016 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 321 1.0E-92 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APH_RS00170 5584f19d86c8fa5b11895048ef158504 364 PIRSF PIRSF006769 1 357 6.5E-116 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 PANTHER PTHR36918 2 157 3.7E-27 T 20-04-2016 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 27.962 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 Gene3D G3DSA:3.10.420.10 2 156 2.5E-57 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 SUPERFAMILY SSF54611 3 156 9.16E-42 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 Pfam PF02556 Preprotein translocase subunit SecB 2 152 3.4E-49 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 PANTHER PTHR36918:SF1 2 157 3.7E-27 T 20-04-2016 APH_RS00460 9213cf4b87d5277e78c69914ec1b7bfa 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 2 152 1.6E-35 T 20-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 Gene3D G3DSA:3.10.580.10 184 313 1.1E-18 T 20-04-2016 APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 SMART SM01091 335 412 2.3E-18 T 20-04-2016 IPR005170 Transporter-associated domain APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF03471 Transporter associated domain 336 410 7.7E-16 T 20-04-2016 IPR005170 Transporter-associated domain APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 SUPERFAMILY SSF54631 192 331 3.65E-28 T 20-04-2016 APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF01595 Domain of unknown function DUF21 3 178 2.6E-39 T 20-04-2016 IPR002550 Domain of unknown function DUF21 APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 PANTHER PTHR22777 2 409 9.4E-120 T 20-04-2016 APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 Gene3D G3DSA:3.30.465.10 314 409 1.2E-20 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF00571 CBS domain 274 319 1.8E-4 T 20-04-2016 IPR000644 CBS domain APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF00571 CBS domain 197 252 5.0E-4 T 20-04-2016 IPR000644 CBS domain APH_RS03780 c0e8770ce372b95872dba6dd7f6061e2 422 SUPERFAMILY SSF56176 333 416 2.7E-17 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 PANTHER PTHR15184:SF34 194 451 9.3E-171 T 20-04-2016 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF07497 Rho termination factor, RNA-binding domain 84 154 2.6E-25 T 20-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00357 83 149 2.4E-12 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 TIGRFAM TIGR00767 rho: transcription termination factor Rho 34 451 7.2E-193 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 PANTHER PTHR15184 12 177 9.3E-171 T 20-04-2016 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 PANTHER PTHR15184 194 451 9.3E-171 T 20-04-2016 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF50249 82 153 2.74E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:2.40.50.140 82 146 2.0E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00959 36 78 2.4E-11 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Hamap MF_01884 Transcription termination factor Rho [rho]. 32 452 205.668 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:1.10.720.10 32 78 5.8E-16 T 20-04-2016 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF07498 Rho termination factor, N-terminal domain 36 77 1.0E-11 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF68912 32 77 3.81E-8 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 193 397 2.5E-27 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF52540 122 405 7.09E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 PANTHER PTHR15184:SF34 12 177 9.3E-171 T 20-04-2016 APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:3.40.50.300 162 450 8.0E-105 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00300 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00382 204 384 8.1E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 ProSitePatterns PS00113 Adenylate kinase signature. 85 96 - T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 Pfam PF00406 Adenylate kinase 10 190 1.1E-36 T 20-04-2016 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 SUPERFAMILY SSF52540 7 213 5.47E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 161 176 1.1E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 38 52 1.1E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 9 22 1.1E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 85 101 1.1E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 Gene3D G3DSA:3.40.50.300 7 211 3.5E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 PANTHER PTHR23359 1 215 4.6E-53 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 TIGRFAM TIGR01351 adk: adenylate kinase 7 211 1.1E-55 T 20-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01320 c3c2b68febbf5d53454d497d602fc301 216 Hamap MF_00235 Adenylate kinase [adk]. 6 212 33.366 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 340 347 - T 20-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PANTHER PTHR11963 49 496 4.6E-161 T 20-04-2016 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 SUPERFAMILY SSF52949 20 161 3.06E-15 T 20-04-2016 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 Gene3D G3DSA:3.40.220.10 13 155 1.4E-10 T 20-04-2016 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PRINTS PR00481 Cytosol aminopeptidase signature 255 272 2.6E-51 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 2.6E-51 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PRINTS PR00481 Cytosol aminopeptidase signature 314 335 2.6E-51 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PRINTS PR00481 Cytosol aminopeptidase signature 277 298 2.6E-51 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PRINTS PR00481 Cytosol aminopeptidase signature 336 356 2.6E-51 T 20-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 23 137 1.6E-8 T 20-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 179 487 7.7E-115 T 20-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 Gene3D G3DSA:3.40.630.10 175 494 1.2E-125 T 20-04-2016 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 7 496 32.505 T 20-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 PANTHER PTHR11963:SF13 49 496 4.6E-161 T 20-04-2016 APH_RS01015 d8e538c2225849708451f9ec796dfad5 506 SUPERFAMILY SSF53187 175 494 2.98E-115 T 20-04-2016 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 SUPERFAMILY SSF52943 4 133 1.57E-29 T 20-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 PANTHER PTHR11693 6 134 4.2E-23 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 Gene3D G3DSA:1.10.287.80 84 128 2.3E-21 T 20-04-2016 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 Pfam PF00231 ATP synthase 5 133 1.4E-27 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 Gene3D G3DSA:1.10.287.80 50 83 9.8E-4 T 20-04-2016 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 PRINTS PR00126 ATP synthase gamma subunit signature 111 132 3.7E-15 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 PRINTS PR00126 ATP synthase gamma subunit signature 7 24 3.7E-15 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS03275 19eb6b44814c095b15265f73616ec42c 134 PRINTS PR00126 ATP synthase gamma subunit signature 80 99 3.7E-15 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS05495 22b3054a83b0bf7ceafe41402ac5951b 318 Pfam PF01617 Surface antigen 3 303 2.8E-40 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05495 22b3054a83b0bf7ceafe41402ac5951b 318 Gene3D G3DSA:2.40.160.20 267 299 4.9E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05495 22b3054a83b0bf7ceafe41402ac5951b 318 Gene3D G3DSA:2.40.160.20 40 85 4.9E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05495 22b3054a83b0bf7ceafe41402ac5951b 318 SUPERFAMILY SSF56925 41 72 5.23E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05495 22b3054a83b0bf7ceafe41402ac5951b 318 SUPERFAMILY SSF56925 267 300 5.23E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 ProSitePatterns PS00195 Glutaredoxin active site. 6 21 - T 20-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 79 4.1E-32 T 20-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 Gene3D G3DSA:3.40.30.10 2 79 9.2E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 SUPERFAMILY SSF52833 1 79 5.99E-29 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 PANTHER PTHR10168 4 79 5.4E-28 T 20-04-2016 APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 46 59 2.7E-17 T 20-04-2016 IPR014025 Glutaredoxin subgroup APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 60 73 2.7E-17 T 20-04-2016 IPR014025 Glutaredoxin subgroup APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 4 22 2.7E-17 T 20-04-2016 IPR014025 Glutaredoxin subgroup APH_RS04660 533836051d2b530eabf2600bd41cfdef 80 Pfam PF00462 Glutaredoxin 4 63 5.8E-22 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APH_RS02405 c311a009122f4517e1cb426094fca634 323 PANTHER PTHR23409 12 323 7.2E-57 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APH_RS02405 c311a009122f4517e1cb426094fca634 323 SUPERFAMILY SSF47240 10 321 3.98E-88 T 20-04-2016 IPR009078 Ferritin-like superfamily APH_RS02405 c311a009122f4517e1cb426094fca634 323 Pfam PF00268 Ribonucleotide reductase, small chain 9 284 6.8E-71 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APH_RS02405 c311a009122f4517e1cb426094fca634 323 PIRSF PIRSF000355 3 320 4.9E-101 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APH_RS02405 c311a009122f4517e1cb426094fca634 323 PANTHER PTHR23409:SF18 12 323 7.2E-57 T 20-04-2016 APH_RS02405 c311a009122f4517e1cb426094fca634 323 Gene3D G3DSA:1.10.620.20 9 292 2.4E-96 T 20-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APH_RS01350 4b656570e5edae8ae9640c7905e0b05b 670 PANTHER PTHR30619 1 473 6.8E-58 T 20-04-2016 APH_RS01350 4b656570e5edae8ae9640c7905e0b05b 670 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 227 412 8.8E-28 T 20-04-2016 IPR004477 ComEC/Rec2-related protein APH_RS01350 4b656570e5edae8ae9640c7905e0b05b 670 PANTHER PTHR30619:SF2 1 473 6.8E-58 T 20-04-2016 APH_RS01350 4b656570e5edae8ae9640c7905e0b05b 670 Pfam PF13567 Domain of unknown function (DUF4131) 1 164 2.9E-16 T 20-04-2016 IPR025405 Domain of unknown function DUF4131 APH_RS01350 4b656570e5edae8ae9640c7905e0b05b 670 Pfam PF03772 Competence protein 206 475 8.0E-55 T 20-04-2016 IPR004477 ComEC/Rec2-related protein APH_RS00625 e138be3945b774e7999534fd0ee895d9 109 PIRSF PIRSF005894 1 109 9.6E-49 T 20-04-2016 IPR014434 Monothiol glutaredoxin APH_RS00625 e138be3945b774e7999534fd0ee895d9 109 Pfam PF00462 Glutaredoxin 18 82 6.2E-18 T 20-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APH_RS00625 e138be3945b774e7999534fd0ee895d9 109 Gene3D G3DSA:3.40.30.10 9 103 1.0E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00625 e138be3945b774e7999534fd0ee895d9 109 PANTHER PTHR10293 1 107 9.7E-59 T 20-04-2016 IPR004480 Monothiol glutaredoxin-related APH_RS00625 e138be3945b774e7999534fd0ee895d9 109 SUPERFAMILY SSF52833 4 106 1.07E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00625 e138be3945b774e7999534fd0ee895d9 109 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 6 103 1.8E-46 T 20-04-2016 IPR004480 Monothiol glutaredoxin-related APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 SUPERFAMILY SSF52440 3 116 2.56E-26 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 PANTHER PTHR21621 1 306 4.7E-75 T 20-04-2016 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 118 289 3.4E-55 T 20-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 Gene3D G3DSA:3.30.470.20 184 291 3.4E-36 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 Hamap MF_00162 Glutathione synthetase [gshB]. 1 306 104.542 T 20-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 PANTHER PTHR21621:SF4 1 306 4.7E-75 T 20-04-2016 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 SUPERFAMILY SSF56059 118 303 5.48E-47 T 20-04-2016 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 303 2.3E-109 T 20-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 Gene3D G3DSA:3.30.1490.20 131 183 3.4E-14 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 114 3.5E-27 T 20-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APH_RS00850 6280e5c66282c5460a18c08637d958bd 306 Gene3D G3DSA:3.40.50.20 3 122 2.5E-31 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APH_RS00985 f78e076e337e9450ffdebe9d0e67212d 260 SMART SM01211 1 259 9.8E-101 T 20-04-2016 APH_RS00985 f78e076e337e9450ffdebe9d0e67212d 260 PANTHER PTHR10099 1 260 2.0E-63 T 20-04-2016 APH_RS00985 f78e076e337e9450ffdebe9d0e67212d 260 SUPERFAMILY SSF52317 1 259 5.33E-65 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS00985 f78e076e337e9450ffdebe9d0e67212d 260 PIRSF PIRSF001586 1 260 1.1E-73 T 20-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS00985 f78e076e337e9450ffdebe9d0e67212d 260 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 259 4.5E-68 T 20-04-2016 APH_RS00985 f78e076e337e9450ffdebe9d0e67212d 260 Gene3D G3DSA:3.40.50.880 1 218 3.7E-20 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 SUPERFAMILY SSF109604 331 475 4.27E-12 T 20-04-2016 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 552 2.4E-143 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 PANTHER PTHR30075:SF2 1 700 1.2E-149 T 20-04-2016 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 697 2.0E-120 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 PANTHER PTHR30075 1 700 1.2E-149 T 20-04-2016 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 697 18.247 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 239 254 1.6E-16 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-16 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 307 323 1.6E-16 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 384 403 1.6E-16 T 20-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00070 e87140e2dc9a44ab30c9736274efdd5f 701 Pfam PF05746 DALR anticodon binding domain 581 682 6.4E-5 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APH_RS02410 451c813311c77e51d0190cb1a760b386 197 SUPERFAMILY SSF52833 7 187 2.16E-21 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS02410 451c813311c77e51d0190cb1a760b386 197 Gene3D G3DSA:3.40.30.10 10 183 2.8E-22 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS02410 451c813311c77e51d0190cb1a760b386 197 Pfam PF00578 AhpC/TSA family 57 171 7.6E-7 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 Gene3D G3DSA:3.40.720.10 296 492 9.0E-77 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 Gene3D G3DSA:3.40.720.10 5 77 9.0E-77 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 PIRSF PIRSF001492 1 495 3.3E-189 T 20-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 492 1.1E-177 T 20-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 493 44.633 T 20-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 280 7.8E-61 T 20-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 Pfam PF01676 Metalloenzyme superfamily 5 481 1.0E-68 T 20-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 SUPERFAMILY SSF64158 77 291 9.42E-68 T 20-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 PANTHER PTHR31637:SF0 6 496 6.3E-214 T 20-04-2016 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 Gene3D G3DSA:3.40.1450.10 78 292 1.0E-67 T 20-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 PANTHER PTHR31637 6 496 6.3E-214 T 20-04-2016 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 SUPERFAMILY SSF53649 5 77 1.44E-66 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APH_RS01715 371ed813552f6961bae98c93df1f721c 496 SUPERFAMILY SSF53649 292 492 1.44E-66 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APH_RS04425 93eaaea2aaa0a57c232813069c51931d 110 SUPERFAMILY SSF141000 16 108 7.72E-23 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APH_RS04425 93eaaea2aaa0a57c232813069c51931d 110 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 17 110 3.2E-19 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APH_RS04425 93eaaea2aaa0a57c232813069c51931d 110 PANTHER PTHR15004:SF0 17 105 2.2E-22 T 20-04-2016 APH_RS04425 93eaaea2aaa0a57c232813069c51931d 110 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 16 110 19.977 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APH_RS04425 93eaaea2aaa0a57c232813069c51931d 110 PANTHER PTHR15004 17 105 2.2E-22 T 20-04-2016 APH_RS04425 93eaaea2aaa0a57c232813069c51931d 110 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 34 105 1.3E-17 T 20-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 PANTHER PTHR24220:SF111 6 220 5.3E-77 T 20-04-2016 APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 Gene3D G3DSA:3.40.50.300 3 219 1.3E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 SUPERFAMILY SSF52540 5 221 7.04E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 SMART SM00382 31 220 6.9E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 PANTHER PTHR24220 6 220 5.3E-77 T 20-04-2016 APH_RS00190 d04231cbdc2a54d507548f1c127171a7 225 Pfam PF00005 ABC transporter 23 170 1.5E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 Gene3D G3DSA:3.40.50.300 149 322 1.2E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 PANTHER PTHR30258 12 126 1.7E-61 T 20-04-2016 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 PANTHER PTHR30258 149 322 1.7E-61 T 20-04-2016 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 SUPERFAMILY SSF52540 11 311 4.15E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 PANTHER PTHR30258:SF12 12 126 1.7E-61 T 20-04-2016 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 PANTHER PTHR30258:SF12 149 322 1.7E-61 T 20-04-2016 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 Pfam PF00437 Type II/IV secretion system protein 13 312 9.8E-90 T 20-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 Gene3D G3DSA:3.30.450.90 11 108 6.5E-29 T 20-04-2016 APH_RS05715 e6100ad35c0b59bb3690ae72d9c68b90 332 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 19 324 1.2E-126 T 20-04-2016 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 APH_RS03855 73a0785d6d6889bd2b5cfc9a10b109eb 257 Pfam PF00583 Acetyltransferase (GNAT) family 174 244 4.1E-9 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APH_RS03855 73a0785d6d6889bd2b5cfc9a10b109eb 257 Gene3D G3DSA:3.40.630.30 163 252 1.5E-13 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APH_RS03855 73a0785d6d6889bd2b5cfc9a10b109eb 257 SUPERFAMILY SSF55729 160 253 1.31E-17 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 SUPERFAMILY SSF64153 4 217 3.01E-48 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Pfam PF01256 Carbohydrate kinase 229 439 2.2E-44 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Gene3D G3DSA:3.40.1190.20 192 457 3.7E-60 T 20-04-2016 IPR029056 Ribokinase-like APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 196 457 15.038 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Pfam PF03853 YjeF-related protein N-terminus 97 165 1.9E-21 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Pfam PF03853 YjeF-related protein N-terminus 22 79 8.4E-11 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 SUPERFAMILY SSF53613 195 456 5.77E-50 T 20-04-2016 IPR029056 Ribokinase-like APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 2 186 21.682 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 207 456 8.5E-47 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Gene3D G3DSA:3.40.50.10260 3 186 3.5E-48 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 PANTHER PTHR12592 2 459 3.9E-72 T 20-04-2016 APH_RS02495 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 PANTHER PTHR12592:SF0 2 459 3.9E-72 T 20-04-2016 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 Gene3D G3DSA:3.30.160.20 193 271 3.9E-37 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS02105 54805df472c489d2de3c02b0f0311862 340 Gene3D G3DSA:1.20.58.410 3 76 3.1E-15 T 20-04-2016 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 PANTHER PTHR11075 1 338 2.9E-144 T 20-04-2016 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 Pfam PF00472 RF-1 domain 194 303 6.7E-40 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 SUPERFAMILY SSF75620 3 328 1.18E-118 T 20-04-2016 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 Pfam PF03462 PCRF domain 4 185 8.9E-50 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 SMART SM00937 46 160 5.3E-43 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 PANTHER PTHR11075:SF6 1 338 2.9E-144 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 210 226 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_RS02105 54805df472c489d2de3c02b0f0311862 340 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 328 2.2E-140 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 9.3E-19 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 TIGRFAM TIGR00158 L9: ribosomal protein bL9 3 146 1.3E-29 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 Pfam PF01281 Ribosomal protein L9, N-terminal domain 4 45 1.4E-13 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 Gene3D G3DSA:3.10.430.100 61 147 8.1E-21 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 Gene3D G3DSA:3.40.5.10 3 50 3.7E-15 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 SUPERFAMILY SSF55653 58 147 1.57E-21 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 PANTHER PTHR21368 2 163 3.8E-36 T 20-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 2 147 20.885 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00685 2908d5f661d395c0c62bd32a355b3730 205 SUPERFAMILY SSF55658 3 56 1.29E-10 T 20-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Pfam PF01513 ATP-NAD kinase 42 217 4.4E-17 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Gene3D G3DSA:2.60.200.30 126 241 2.1E-27 T 20-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Gene3D G3DSA:3.40.50.10330 37 125 1.4E-13 T 20-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 SUPERFAMILY SSF111331 40 256 5.63E-50 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Hamap MF_00361 NAD kinase [nadK]. 13 270 19.347 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 PANTHER PTHR20275 38 268 1.2E-72 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APH_RS00420 88e0200cf92b76f6a1dcb0308d0260e9 270 PANTHER PTHR20275:SF7 38 268 1.2E-72 T 20-04-2016 APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 SUPERFAMILY SSF52540 323 568 1.85E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 Gene3D G3DSA:1.20.1560.10 3 311 2.2E-50 T 20-04-2016 APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 Gene3D G3DSA:3.40.50.300 329 562 3.0E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 PANTHER PTHR24221 1 568 5.0E-180 T 20-04-2016 APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 Pfam PF00005 ABC transporter 348 497 3.7E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 Pfam PF00664 ABC transporter transmembrane region 15 279 2.4E-32 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 SMART SM00382 357 543 7.4E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS00700 437d0d4d506f80fc48fabab2ca16a9ae 578 SUPERFAMILY SSF90123 4 311 1.83E-55 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APH_RS01915 f9aa41ac7841ddb6d97f3f249185dd68 363 Gene3D G3DSA:1.10.1040.10 183 267 1.7E-4 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APH_RS01915 f9aa41ac7841ddb6d97f3f249185dd68 363 SUPERFAMILY SSF48179 173 268 1.45E-8 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APH_RS04460 40848422c51ac5f1b28283bbd758b038 135 Pfam PF04379 Protein of unknown function (DUF525) 24 108 3.2E-31 T 20-04-2016 IPR007474 ApaG domain APH_RS04460 40848422c51ac5f1b28283bbd758b038 135 Gene3D G3DSA:2.60.40.1470 13 128 7.8E-42 T 20-04-2016 IPR007474 ApaG domain APH_RS04460 40848422c51ac5f1b28283bbd758b038 135 SUPERFAMILY SSF110069 13 130 5.1E-43 T 20-04-2016 IPR007474 ApaG domain APH_RS04460 40848422c51ac5f1b28283bbd758b038 135 PANTHER PTHR14289 13 131 5.4E-43 T 20-04-2016 APH_RS03875 2af44daccf228ee92002c21359b7bd9b 185 Gene3D G3DSA:2.40.160.20 64 183 1.1E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03875 2af44daccf228ee92002c21359b7bd9b 185 Pfam PF01617 Surface antigen 28 185 5.8E-38 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS03875 2af44daccf228ee92002c21359b7bd9b 185 SUPERFAMILY SSF56925 67 183 1.67E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03860 861beec0636cb1d5a623b29f0a4116a1 390 SUPERFAMILY SSF55785 254 305 7.67E-5 T 20-04-2016 IPR000014 PAS domain APH_RS00585 a14290c1f2ea1a2e534f8bc3abd3e6d4 148 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 1 128 1.8E-32 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APH_RS00585 a14290c1f2ea1a2e534f8bc3abd3e6d4 148 PANTHER PTHR33362 1 96 6.0E-46 T 20-04-2016 APH_RS00585 a14290c1f2ea1a2e534f8bc3abd3e6d4 148 PANTHER PTHR33362:SF1 1 96 6.0E-46 T 20-04-2016 APH_RS04725 7b99296d5d3ed5f53dd7e0e039ed2c40 157 Gene3D G3DSA:2.40.160.20 93 142 1.2E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04725 7b99296d5d3ed5f53dd7e0e039ed2c40 157 SUPERFAMILY SSF56925 104 143 6.67E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04725 7b99296d5d3ed5f53dd7e0e039ed2c40 157 Pfam PF01617 Surface antigen 65 149 5.2E-20 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 TIGRFAM TIGR00615 recR: recombination protein RecR 3 191 2.7E-58 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 SMART SM00493 76 161 0.0087 T 20-04-2016 IPR006171 Toprim domain APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 ProSitePatterns PS01300 RecR protein signature. 53 74 - T 20-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 PANTHER PTHR30446 2 194 3.4E-77 T 20-04-2016 APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 Pfam PF13662 Toprim domain 77 167 5.6E-22 T 20-04-2016 IPR006171 Toprim domain APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 PANTHER PTHR30446:SF0 2 194 3.4E-77 T 20-04-2016 APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 SUPERFAMILY SSF111304 3 193 9.55E-67 T 20-04-2016 IPR023627 Recombination protein RecR APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 Hamap MF_00017 Recombination protein RecR [recR]. 1 194 85.147 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APH_RS03915 a2d9c5d5166e791efb9b28c1f67fa011 194 Pfam PF02132 RecR protein 37 74 2.3E-12 T 20-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APH_RS02435 2bea21042bbf9165786344385b6a7564 134 Gene3D G3DSA:3.40.50.300 2 129 5.7E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02435 2bea21042bbf9165786344385b6a7564 134 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 80 96 - T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS02435 2bea21042bbf9165786344385b6a7564 134 SMART SM00534 1 134 6.1E-53 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS02435 2bea21042bbf9165786344385b6a7564 134 SUPERFAMILY SSF52540 2 133 3.66E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02435 2bea21042bbf9165786344385b6a7564 134 PANTHER PTHR11361 1 127 4.5E-85 T 20-04-2016 APH_RS02435 2bea21042bbf9165786344385b6a7564 134 Pfam PF00488 MutS domain V 3 130 8.5E-63 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS02435 2bea21042bbf9165786344385b6a7564 134 PANTHER PTHR11361:SF86 1 127 4.5E-85 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:2.120.10.90 788 887 1.5E-108 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:2.120.10.90 519 733 1.5E-108 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:3.30.1360.40 233 329 1.6E-34 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 SUPERFAMILY SSF101904 521 734 6.02E-93 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 SUPERFAMILY SSF101904 788 897 6.02E-93 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 PANTHER PTHR10169:SF48 438 732 1.8E-297 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 PANTHER PTHR10169:SF48 1 410 1.8E-297 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 PANTHER PTHR10169:SF48 778 862 1.8E-297 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:1.10.268.10 360 483 2.9E-35 T 20-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 888 0.0 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 892 27.111 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 SUPERFAMILY SSF56719 27 509 1.26E-166 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:3.90.199.10 31 213 1.5E-81 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 PANTHER PTHR10169 438 732 1.8E-297 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 PANTHER PTHR10169 1 410 1.8E-297 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 PANTHER PTHR10169 778 862 1.8E-297 T 20-04-2016 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 482 6.4E-149 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 SMART SM00434 8 487 1.1E-244 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 527 572 6.3E-10 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 841 887 1.3E-13 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 638 681 0.0098 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 791 836 2.2E-9 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 577 625 2.6E-4 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_RS03555 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 685 732 1.1E-7 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_RS02260 e84b642f5f02847b7b2215dc8586de99 250 SUPERFAMILY SSF64167 2 247 7.32E-58 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APH_RS02260 e84b642f5f02847b7b2215dc8586de99 250 PANTHER PTHR30457 2 183 5.5E-45 T 20-04-2016 APH_RS02260 e84b642f5f02847b7b2215dc8586de99 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 24.531 T 20-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APH_RS02260 e84b642f5f02847b7b2215dc8586de99 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 172 1.7E-43 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APH_RS02260 e84b642f5f02847b7b2215dc8586de99 250 Pfam PF01975 Survival protein SurE 3 182 1.1E-42 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APH_RS02260 e84b642f5f02847b7b2215dc8586de99 250 Gene3D G3DSA:3.40.1210.10 2 247 6.4E-59 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 95 120 4.2E-31 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 11 40 4.2E-31 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 41 70 4.2E-31 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 Pfam PF01245 Ribosomal protein L19 13 120 1.0E-38 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 PIRSF PIRSF002191 1 128 1.5E-42 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 PANTHER PTHR15680 1 120 5.4E-41 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 SUPERFAMILY SSF50104 13 122 2.61E-38 T 20-04-2016 IPR008991 Translation protein SH3-like domain APH_RS05115 9398c86b18002c746bf982c240ea8c4a 128 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 12 120 1.6E-38 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01420 7977b769c07f3e8d48bc4f21e7631a1d 352 SUPERFAMILY SSF51905 7 296 3.04E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01420 7977b769c07f3e8d48bc4f21e7631a1d 352 Gene3D G3DSA:3.30.9.10 146 299 2.6E-18 T 20-04-2016 APH_RS01420 7977b769c07f3e8d48bc4f21e7631a1d 352 Pfam PF01266 FAD dependent oxidoreductase 7 330 8.6E-26 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APH_RS01420 7977b769c07f3e8d48bc4f21e7631a1d 352 Gene3D G3DSA:3.40.50.720 3 40 3.6E-7 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 PANTHER PTHR11680 1 391 6.8E-214 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 224 240 - T 20-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 9 422 49.337 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 Pfam PF00464 Serine hydroxymethyltransferase 10 386 5.6E-161 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 Gene3D G3DSA:3.90.1150.10 286 419 8.6E-44 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 SUPERFAMILY SSF53383 10 416 9.71E-165 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 PIRSF PIRSF000412 5 418 2.0E-161 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APH_RS00690 b6d7144abfe439b1da3f9ba1b74223cb 425 Gene3D G3DSA:3.40.640.10 39 285 4.9E-99 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS03995 1029b30ebc03b52a5752188639d8dbd6 220 PANTHER PTHR10655:SF17 14 205 3.0E-36 T 20-04-2016 APH_RS03995 1029b30ebc03b52a5752188639d8dbd6 220 PANTHER PTHR10655 14 205 3.0E-36 T 20-04-2016 APH_RS03995 1029b30ebc03b52a5752188639d8dbd6 220 SUPERFAMILY SSF53474 13 214 7.16E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS03995 1029b30ebc03b52a5752188639d8dbd6 220 Pfam PF02230 Phospholipase/Carboxylesterase 11 212 1.7E-34 T 20-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 APH_RS03995 1029b30ebc03b52a5752188639d8dbd6 220 Gene3D G3DSA:3.40.50.1820 12 214 1.5E-42 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 Pfam PF00203 Ribosomal protein S19 3 84 5.1E-27 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 PIRSF PIRSF002144 1 93 3.3E-27 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 ProSitePatterns PS00323 Ribosomal protein S19 signature. 54 78 - T 20-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 54 66 1.4E-15 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 66 81 1.4E-15 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 34 53 1.4E-15 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 6.0E-30 T 20-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 PANTHER PTHR11880:SF8 1 93 9.8E-31 T 20-04-2016 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 SUPERFAMILY SSF54570 2 85 2.62E-26 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 PANTHER PTHR11880 1 93 9.8E-31 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 Gene3D G3DSA:3.30.860.10 1 92 9.2E-31 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APH_RS01240 c1f27f096717d857ae3899141efd06a8 94 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 90 20.768 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Hamap MF_00203 UvrABC system protein C [uvrC]. 13 604 23.718 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 PANTHER PTHR30562:SF1 27 605 1.8E-174 T 20-04-2016 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Pfam PF14520 Helix-hairpin-helix domain 554 606 2.5E-9 T 20-04-2016 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Gene3D G3DSA:4.10.860.10 192 249 1.2E-7 T 20-04-2016 IPR001943 UVR domain GO:0005515 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 SMART SM00465 26 107 8.4E-18 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 SUPERFAMILY SSF82771 26 109 1.83E-20 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 PANTHER PTHR30562 27 605 1.8E-174 T 20-04-2016 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Pfam PF01541 GIY-YIG catalytic domain 28 102 4.3E-10 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 26 586 4.1E-137 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 SUPERFAMILY SSF47781 517 608 2.45E-17 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 SUPERFAMILY SSF46600 202 250 3.92E-6 T 20-04-2016 IPR001943 UVR domain GO:0005515 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Gene3D G3DSA:1.10.150.20 554 606 8.3E-18 T 20-04-2016 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 SMART SM00278 585 604 5.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 SMART SM00278 553 572 75.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 391 538 7.8E-43 T 20-04-2016 IPR001162 UvrC family homology region APH_RS03520 2ef2b99ecb88e99897472a94b39a0688 614 Gene3D G3DSA:3.40.1440.10 26 104 9.4E-9 T 20-04-2016 IPR027299 GIY-YIG domain APH_RS02340 c94897e4740ff40525b199dab072628a 227 PANTHER PTHR35809 3 215 1.8E-62 T 20-04-2016 APH_RS02340 c94897e4740ff40525b199dab072628a 227 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 6 212 5.2E-49 T 20-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APH_RS02340 c94897e4740ff40525b199dab072628a 227 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 5 212 33.96 T 20-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APH_RS02340 c94897e4740ff40525b199dab072628a 227 Pfam PF02666 Phosphatidylserine decarboxylase 42 208 1.0E-27 T 20-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF56719 719 784 2.88E-77 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF56719 405 567 2.88E-77 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.30.565.10 14 209 2.3E-86 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.40.50.670 710 774 1.6E-84 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.40.50.670 411 557 1.6E-84 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 793 87.421 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 792 2.7E-277 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Pfam PF01751 Toprim domain 426 537 7.3E-17 T 20-04-2016 IPR006171 Toprim domain APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 SMART SM00387 30 175 2.1E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF54211 227 398 5.88E-51 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Pfam PF00204 DNA gyrase B 227 397 3.0E-53 T 20-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 171 1.9E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.30.230.10 226 398 2.1E-62 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 4 14 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 746 758 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 226 248 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 249 267 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 762 778 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 477 486 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 367 381 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 381 401 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 319 335 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.1E-58 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 20-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PANTHER PTHR10169 2 560 4.1E-251 T 20-04-2016 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PANTHER PTHR10169 719 792 4.1E-251 T 20-04-2016 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 721 782 2.2E-27 T 20-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 532 544 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 112 126 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 427 441 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 725 741 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 494 510 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 34 49 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 69 82 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 275 288 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 512 529 7.1E-69 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF55874 4 210 3.97E-68 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS02960 ca51fa5c526372296e36addc1025c22e 793 SMART SM00433 34 786 3.1E-229 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_RS01605 36469563930e2e10bcd85605de09add9 295 SMART SM00729 50 258 1.1E-10 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APH_RS01605 36469563930e2e10bcd85605de09add9 295 PANTHER PTHR10949:SF0 4 281 6.7E-158 T 20-04-2016 APH_RS01605 36469563930e2e10bcd85605de09add9 295 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 281 6.1E-116 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS01605 36469563930e2e10bcd85605de09add9 295 Gene3D G3DSA:3.20.20.70 19 286 1.5E-69 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS01605 36469563930e2e10bcd85605de09add9 295 PIRSF PIRSF005963 1 294 4.1E-136 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS01605 36469563930e2e10bcd85605de09add9 295 PANTHER PTHR10949 4 281 6.7E-158 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS01605 36469563930e2e10bcd85605de09add9 295 Pfam PF04055 Radical SAM superfamily 55 216 6.1E-13 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APH_RS01605 36469563930e2e10bcd85605de09add9 295 SUPERFAMILY SSF102114 14 282 1.16E-64 T 20-04-2016 APH_RS01605 36469563930e2e10bcd85605de09add9 295 Hamap MF_00206 Lipoyl synthase [lipA]. 1 288 151.296 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:3.40.50.620 222 264 1.1E-39 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:3.40.50.620 8 185 1.1E-39 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 PANTHER PTHR37940 1 514 4.7E-144 T 20-04-2016 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 8 507 4.5E-59 T 20-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 6 510 28.444 T 20-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 Pfam PF01921 tRNA synthetases class I (K) 7 353 1.4E-128 T 20-04-2016 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:1.10.10.350 416 508 4.2E-26 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 43 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 SUPERFAMILY SSF52374 8 314 6.7E-56 T 20-04-2016 APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:3.40.50.620 265 313 7.9E-5 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02540 16cedd64b575f3e9bebaea353873106d 514 SUPERFAMILY SSF48163 321 508 1.31E-29 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 PANTHER PTHR11938:SF101 1 75 4.3E-27 T 20-04-2016 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 SUPERFAMILY SSF54862 3 97 1.77E-23 T 20-04-2016 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 Gene3D G3DSA:3.30.70.20 4 113 3.0E-21 T 20-04-2016 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 Pfam PF11953 Domain of unknown function (DUF3470) 81 119 1.2E-11 T 20-04-2016 IPR022569 Ferredoxin, C-terminal APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.2E-17 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.2E-17 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.2E-17 T 20-04-2016 IPR000813 7Fe ferredoxin GO:0009055 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 PANTHER PTHR11938 1 75 4.3E-27 T 20-04-2016 APH_RS00130 1e9aa8181a34470a8a324fd3673d786b 126 Pfam PF00037 4Fe-4S binding domain 34 55 6.3E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 SUPERFAMILY SSF53098 1 158 5.69E-37 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 153 3.7E-35 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 156 33.469 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 PANTHER PTHR30194 1 155 2.7E-38 T 20-04-2016 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.6E-19 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.6E-19 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.6E-19 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 141 153 2.6E-19 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.6E-19 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 156 1.5E-32 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_RS00090 7eca4b6c95d973dcd7e6b69f3e168f63 163 Gene3D G3DSA:3.30.420.10 1 158 2.5E-42 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PANTHER PTHR11956 323 579 3.2E-156 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PANTHER PTHR11956 7 301 3.2E-156 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PANTHER PTHR11956:SF6 323 579 3.2E-156 T 20-04-2016 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PANTHER PTHR11956:SF6 7 301 3.2E-156 T 20-04-2016 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 18 579 4.9E-102 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 139 148 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 SMART SM01016 12 100 7.2E-23 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 SMART SM00836 456 579 1.4E-47 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Pfam PF00750 tRNA synthetases class I (R) 119 441 1.3E-19 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 17 99 2.5E-15 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 SUPERFAMILY SSF47323 451 579 3.99E-30 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Gene3D G3DSA:3.40.50.620 123 464 2.3E-87 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Hamap MF_00123 Arginine--tRNA ligase [argS]. 12 579 22.631 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 160 3.4E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 144 3.4E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 168 181 3.4E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 325 346 3.4E-23 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 SUPERFAMILY SSF52374 124 466 7.24E-79 T 20-04-2016 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 SUPERFAMILY SSF55190 8 120 2.22E-15 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Gene3D G3DSA:1.10.730.10 465 579 6.7E-29 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Pfam PF05746 DALR anticodon binding domain 456 579 1.3E-23 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APH_RS02915 9219e1385ab37639e29c669ea1be662f 580 Gene3D G3DSA:3.30.1360.70 17 119 5.2E-18 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 8 224 1.2E-44 T 20-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 SMART SM00934 6 224 1.3E-74 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 SUPERFAMILY SSF51366 2 226 1.14E-62 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 PANTHER PTHR32119 1 226 3.2E-73 T 20-04-2016 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 223 1.0E-39 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 20-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 Gene3D G3DSA:3.20.20.70 3 226 8.2E-69 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS02275 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 PANTHER PTHR32119:SF2 1 226 3.2E-73 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 3 424 26.651 T 20-04-2016 IPR026593 Protein translocase subunit SecY APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 306 328 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 16 34 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 393 411 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 361 379 9.7E-85 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 Pfam PF00344 SecY translocase 69 407 2.6E-100 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PIRSF PIRSF004557 4 431 5.8E-114 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 Gene3D G3DSA:1.10.3370.10 9 428 7.6E-141 T 20-04-2016 IPR023201 SecY subunit domain APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 20-04-2016 IPR030659 SecY conserved site APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PANTHER PTHR10906:SF2 14 429 2.7E-157 T 20-04-2016 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 PANTHER PTHR10906 14 429 2.7E-157 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 ProSitePatterns PS00756 Protein secY signature 2. 167 184 - T 20-04-2016 IPR030659 SecY conserved site APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 SUPERFAMILY SSF103491 9 415 1.57E-111 T 20-04-2016 IPR023201 SecY subunit domain APH_RS01315 6fade2e9f109978f316e838f442f61c7 434 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 417 6.0E-109 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 PIRSF PIRSF003101 1 403 1.1E-95 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 PANTHER PTHR32432 1 405 1.7E-77 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.90.640.10 232 293 8.7E-19 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.30.420.40 294 345 7.9E-20 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.30.420.40 194 231 7.9E-20 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Pfam PF14450 Cell division protein FtsA 205 368 7.5E-18 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 368 1.3E-83 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 PANTHER PTHR32432:SF4 1 405 1.7E-77 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 SMART SM00842 8 193 1.5E-59 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 SUPERFAMILY SSF53067 195 371 1.68E-33 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Pfam PF02491 SHS2 domain inserted in FTSA 86 159 9.0E-11 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 404 21.281 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 SUPERFAMILY SSF53067 7 194 9.23E-36 T 20-04-2016 APH_RS04755 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.30.420.40 6 136 4.3E-16 T 20-04-2016 APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 Gene3D G3DSA:2.60.370.10 57 179 6.6E-49 T 20-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 PANTHER PTHR21320 5 176 6.0E-60 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 179 34.828 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 173 8.5E-53 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 SUPERFAMILY SSF110111 58 176 8.63E-45 T 20-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 PANTHER PTHR21320:SF3 5 176 6.0E-60 T 20-04-2016 APH_RS04600 a14709fe64eb3f767e9f5fbe1afd368b 183 PIRSF PIRSF005413 1 183 4.8E-67 T 20-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 SUPERFAMILY SSF53067 1 123 7.95E-23 T 20-04-2016 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 Gene3D G3DSA:3.30.420.40 104 259 4.4E-30 T 20-04-2016 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 SUPERFAMILY SSF53067 126 254 9.28E-25 T 20-04-2016 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 251 1.1E-42 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 PANTHER PTHR34265 1 263 5.6E-33 T 20-04-2016 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 Gene3D G3DSA:3.30.420.40 2 64 1.2E-4 T 20-04-2016 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 Pfam PF03309 Type III pantothenate kinase 4 209 1.2E-48 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APH_RS04010 5c990ea1ac6dc581b032e9755d7b7615 263 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 257 26.938 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APH_RS05180 0e8d14b1e5015869c546513dc995196e 182 Pfam PF00578 AhpC/TSA family 53 134 7.9E-6 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APH_RS05180 0e8d14b1e5015869c546513dc995196e 182 SUPERFAMILY SSF52833 10 158 1.1E-11 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS05180 0e8d14b1e5015869c546513dc995196e 182 Gene3D G3DSA:3.40.30.10 11 160 1.2E-10 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00325 871265203f0dbfb8217e04bd3e17afa2 69 SUPERFAMILY SSF54285 5 69 5.52E-13 T 20-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APH_RS00325 871265203f0dbfb8217e04bd3e17afa2 69 Pfam PF02597 ThiS family 8 69 8.9E-10 T 20-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APH_RS00325 871265203f0dbfb8217e04bd3e17afa2 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 7 69 1.4E-16 T 20-04-2016 IPR010035 ThiS, thiamine-biosynthesis APH_RS00325 871265203f0dbfb8217e04bd3e17afa2 69 Gene3D G3DSA:3.10.20.30 5 69 8.5E-17 T 20-04-2016 IPR012675 Beta-grasp domain APH_RS00325 871265203f0dbfb8217e04bd3e17afa2 69 PANTHER PTHR34472:SF1 2 69 6.4E-13 T 20-04-2016 APH_RS00325 871265203f0dbfb8217e04bd3e17afa2 69 PANTHER PTHR34472 2 69 6.4E-13 T 20-04-2016 APH_RS04125 076806918f7e133fc18906d247410efb 435 PANTHER PTHR36842 60 422 3.0E-25 T 20-04-2016 APH_RS04125 076806918f7e133fc18906d247410efb 435 SUPERFAMILY SSF82171 101 429 2.51E-41 T 20-04-2016 APH_RS04125 076806918f7e133fc18906d247410efb 435 Pfam PF04052 TolB amino-terminal domain 25 129 2.6E-18 T 20-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APH_RS04125 076806918f7e133fc18906d247410efb 435 Gene3D G3DSA:3.40.50.10070 25 152 5.1E-30 T 20-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APH_RS04125 076806918f7e133fc18906d247410efb 435 Pfam PF07676 WD40-like Beta Propeller Repeat 325 350 1.8E-6 T 20-04-2016 IPR011659 WD40-like Beta Propeller APH_RS04125 076806918f7e133fc18906d247410efb 435 Pfam PF07676 WD40-like Beta Propeller Repeat 280 316 2.2E-7 T 20-04-2016 IPR011659 WD40-like Beta Propeller APH_RS04125 076806918f7e133fc18906d247410efb 435 Pfam PF07676 WD40-like Beta Propeller Repeat 197 219 0.022 T 20-04-2016 IPR011659 WD40-like Beta Propeller APH_RS04125 076806918f7e133fc18906d247410efb 435 Gene3D G3DSA:2.130.10.10 153 423 3.3E-55 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 Pfam PF02565 Recombination protein O C terminal 81 222 3.9E-13 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 SUPERFAMILY SSF57863 81 181 3.4E-8 T 20-04-2016 APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 177 2.7E-24 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 127 233 9.0E-32 T 20-04-2016 APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 232 13.772 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 Pfam PF11967 Recombination protein O N terminal 1 74 6.8E-13 T 20-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APH_RS03030 b03ae79c956a445c31d5807ba4d01562 245 PANTHER PTHR33991 1 242 1.3E-13 T 20-04-2016 APH_RS04950 236f056ac8342cb5235200652ac72675 305 Gene3D G3DSA:3.40.50.300 115 304 1.4E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04950 236f056ac8342cb5235200652ac72675 305 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 36 303 7.2E-92 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APH_RS04950 236f056ac8342cb5235200652ac72675 305 SUPERFAMILY SSF47364 6 74 7.33E-11 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS04950 236f056ac8342cb5235200652ac72675 305 SMART SM00962 103 304 1.2E-105 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS04950 236f056ac8342cb5235200652ac72675 305 SMART SM00382 102 239 3.3E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS04950 236f056ac8342cb5235200652ac72675 305 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 7.6E-73 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS04950 236f056ac8342cb5235200652ac72675 305 SMART SM00963 11 90 3.7E-8 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APH_RS04950 236f056ac8342cb5235200652ac72675 305 PANTHER PTHR11564:SF16 1 304 1.2E-105 T 20-04-2016 APH_RS04950 236f056ac8342cb5235200652ac72675 305 PANTHER PTHR11564 1 304 1.2E-105 T 20-04-2016 APH_RS04950 236f056ac8342cb5235200652ac72675 305 SUPERFAMILY SSF52540 100 303 8.94E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04950 236f056ac8342cb5235200652ac72675 305 Gene3D G3DSA:1.20.120.140 37 114 1.7E-14 T 20-04-2016 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PANTHER PTHR11961:SF6 61 174 4.1E-35 T 20-04-2016 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 SUPERFAMILY SSF46626 70 170 3.11E-31 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 111 121 1.1E-17 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 144 154 1.1E-17 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 82 89 1.1E-17 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 160 168 1.1E-17 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 95 110 1.1E-17 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 125 141 1.1E-17 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 Gene3D G3DSA:1.10.760.10 70 172 8.3E-34 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 Pfam PF00034 Cytochrome c 73 169 3.4E-9 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APH_RS00800 09b701f3184545b6b2bd1fff4eb9c14e 174 PANTHER PTHR11961 61 174 4.1E-35 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 390 616 5.9E-39 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04546 Sigma-70, non-essential region 139 361 3.4E-24 T 20-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 625 35.591 T 20-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 418 431 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF00140 Sigma-70 factor, region 1.2 97 125 3.5E-9 T 20-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 SUPERFAMILY SSF88946 114 461 3.14E-80 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 390 626 9.2E-114 T 20-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04539 Sigma-70 region 3 473 549 2.1E-23 T 20-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 SUPERFAMILY SSF88659 467 540 6.54E-20 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.10.10 467 518 1.1E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.601.10 111 463 8.2E-99 T 20-04-2016 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 442 450 4.4E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 418 431 4.4E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 566 578 4.4E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 603 614 4.4E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 588 603 4.4E-30 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.10.10 557 627 1.8E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 588 614 - T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 SUPERFAMILY SSF88659 525 624 2.62E-24 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PANTHER PTHR30603:SF0 9 151 2.9E-189 T 20-04-2016 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PANTHER PTHR30603:SF0 344 626 2.9E-189 T 20-04-2016 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04545 Sigma-70, region 4 562 616 9.1E-19 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF03979 Sigma-70 factor, region 1.1 8 84 1.8E-15 T 20-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04542 Sigma-70 region 2 394 463 7.5E-22 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PANTHER PTHR30603 9 151 2.9E-189 T 20-04-2016 APH_RS02450 f5aa4d230b5d3cc0de13e10da5feccd0 627 PANTHER PTHR30603 344 626 2.9E-189 T 20-04-2016 APH_RS00560 c83189cdcf88b6c2ce4890eaae2d5154 248 Gene3D G3DSA:3.40.30.10 74 243 1.8E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00560 c83189cdcf88b6c2ce4890eaae2d5154 248 Pfam PF13462 Thioredoxin 83 240 6.8E-19 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00560 c83189cdcf88b6c2ce4890eaae2d5154 248 PANTHER PTHR13887:SF25 19 247 1.2E-32 T 20-04-2016 APH_RS00560 c83189cdcf88b6c2ce4890eaae2d5154 248 SUPERFAMILY SSF52833 76 240 1.72E-33 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00560 c83189cdcf88b6c2ce4890eaae2d5154 248 PANTHER PTHR13887 19 247 1.2E-32 T 20-04-2016 APH_RS05875 ab9ead11523b5956dc5c54bac36bc3f3 275 SUPERFAMILY SSF74653 175 272 2.16E-9 T 20-04-2016 APH_RS05875 ab9ead11523b5956dc5c54bac36bc3f3 275 Gene3D G3DSA:3.30.1150.10 179 273 1.1E-10 T 20-04-2016 APH_RS05770 22e29f8c31f449b3d397af8e55bba135 273 PANTHER PTHR34138 100 272 9.8E-18 T 20-04-2016 APH_RS05770 22e29f8c31f449b3d397af8e55bba135 273 PANTHER PTHR34138:SF1 100 272 9.8E-18 T 20-04-2016 APH_RS05770 22e29f8c31f449b3d397af8e55bba135 273 Pfam PF04085 rod shape-determining protein MreC 134 266 8.2E-21 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 Gene3D G3DSA:3.40.1670.10 343 459 2.5E-48 T 20-04-2016 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 460 1.4E-147 T 20-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 Gene3D G3DSA:1.20.5.570 460 492 9.0E-11 T 20-04-2016 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 SUPERFAMILY SSF143968 328 492 3.66E-63 T 20-04-2016 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 PANTHER PTHR30108 1 497 1.9E-224 T 20-04-2016 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 SUPERFAMILY SSF50475 3 327 7.06E-112 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 435 1.7E-156 T 20-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APH_RS05535 21e3ac3278a715e864bd56b1ba9ac857 497 PANTHER PTHR30108:SF1 1 497 1.9E-224 T 20-04-2016 APH_RS00565 5bc02e2dc4485e730d2cd9ddec800650 328 PANTHER PTHR23289 6 328 3.3E-97 T 20-04-2016 APH_RS00565 5bc02e2dc4485e730d2cd9ddec800650 328 Pfam PF02628 Cytochrome oxidase assembly protein 8 317 2.0E-98 T 20-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 APH_RS00565 5bc02e2dc4485e730d2cd9ddec800650 328 Hamap MF_01665 Heme A synthase [ctaA]. 3 328 23.865 T 20-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 APH_RS00565 5bc02e2dc4485e730d2cd9ddec800650 328 PANTHER PTHR23289:SF2 6 328 3.3E-97 T 20-04-2016 APH_RS02920 2cb86b6241cdcde8d4463b158fd37942 443 SUPERFAMILY SSF111283 4 442 6.41E-109 T 20-04-2016 APH_RS02920 2cb86b6241cdcde8d4463b158fd37942 443 PANTHER PTHR30624:SF1 6 443 4.0E-106 T 20-04-2016 APH_RS02920 2cb86b6241cdcde8d4463b158fd37942 443 Pfam PF01523 Putative modulator of DNA gyrase 21 312 3.9E-49 T 20-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APH_RS02920 2cb86b6241cdcde8d4463b158fd37942 443 PANTHER PTHR30624 6 443 4.0E-106 T 20-04-2016 APH_RS05355 1b75ff5f70ac1aac74b9c0a7613e479b 303 PANTHER PTHR21327 58 301 5.1E-68 T 20-04-2016 APH_RS05355 1b75ff5f70ac1aac74b9c0a7613e479b 303 Pfam PF00925 GTP cyclohydrolase II 126 279 7.3E-50 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APH_RS05355 1b75ff5f70ac1aac74b9c0a7613e479b 303 PANTHER PTHR21327:SF6 58 301 5.1E-68 T 20-04-2016 APH_RS05355 1b75ff5f70ac1aac74b9c0a7613e479b 303 SUPERFAMILY SSF142695 127 282 8.24E-47 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APH_RS01625 c85590b7e89bb841db5ec60dd00d4a23 97 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 7 89 1.6E-23 T 20-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB APH_RS03720 be8552c68fb9ab668c8ab96639bebfb4 115 Pfam PF01617 Surface antigen 2 58 1.2E-17 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS03720 be8552c68fb9ab668c8ab96639bebfb4 115 Gene3D G3DSA:2.40.160.20 2 60 3.6E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03720 be8552c68fb9ab668c8ab96639bebfb4 115 SUPERFAMILY SSF56925 9 63 3.66E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Gene3D G3DSA:4.10.320.10 138 181 1.6E-16 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Pfam PF02817 e3 binding domain 144 179 1.1E-14 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 419 2.4E-138 T 20-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 PANTHER PTHR23151:SF9 4 419 1.2E-174 T 20-04-2016 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Gene3D G3DSA:3.30.559.10 188 420 1.2E-86 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 419 2.0E-82 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 SUPERFAMILY SSF52777 194 419 2.89E-79 T 20-04-2016 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 SUPERFAMILY SSF51230 1 94 1.24E-22 T 20-04-2016 IPR011053 Single hybrid motif APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 PANTHER PTHR23151 4 419 1.2E-174 T 20-04-2016 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Gene3D G3DSA:2.40.50.100 1 91 3.3E-28 T 20-04-2016 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 SUPERFAMILY SSF47005 138 181 2.62E-11 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APH_RS05080 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Pfam PF00364 Biotin-requiring enzyme 4 78 2.2E-14 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 3.1E-36 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 3.1E-36 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PRINTS PR00151 Porphobilinogen deaminase signature 227 244 3.1E-36 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 3.1E-36 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 3.1E-36 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 228 244 - T 20-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 294 32.411 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 Gene3D G3DSA:3.40.190.10 108 196 1.9E-32 T 20-04-2016 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 Gene3D G3DSA:3.40.190.10 2 107 6.6E-38 T 20-04-2016 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PIRSF PIRSF001438 1 299 8.3E-101 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 223 292 1.9E-10 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 PANTHER PTHR11557 1 295 1.6E-106 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 287 6.2E-111 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 SUPERFAMILY SSF54782 217 296 3.66E-15 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 SUPERFAMILY SSF53850 2 215 1.85E-71 T 20-04-2016 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 210 3.0E-68 T 20-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS03065 ffae66d8da79975cf70a7ed7c9f55a3e 300 Gene3D G3DSA:3.30.160.40 220 293 1.2E-9 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS01385 9287fff4c81bdd976b24e1ece5c720df 58 Pfam PF01783 Ribosomal L32p protein family 2 55 4.3E-24 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APH_RS01385 9287fff4c81bdd976b24e1ece5c720df 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 7.5E-24 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APH_RS01385 9287fff4c81bdd976b24e1ece5c720df 58 PANTHER PTHR35534 1 57 2.1E-21 T 20-04-2016 APH_RS01385 9287fff4c81bdd976b24e1ece5c720df 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 19.352 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APH_RS01385 9287fff4c81bdd976b24e1ece5c720df 58 SUPERFAMILY SSF57829 2 54 1.22E-20 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APH_RS00895 345a7e489d4faad24eb951f50a891df5 126 SUPERFAMILY SSF55326 15 118 2.99E-32 T 20-04-2016 APH_RS00895 345a7e489d4faad24eb951f50a891df5 126 PANTHER PTHR10520 17 119 1.5E-60 T 20-04-2016 APH_RS00895 345a7e489d4faad24eb951f50a891df5 126 PANTHER PTHR10520:SF10 17 119 1.5E-60 T 20-04-2016 APH_RS00895 345a7e489d4faad24eb951f50a891df5 126 Gene3D G3DSA:3.30.1330.10 14 118 1.5E-42 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00895 345a7e489d4faad24eb951f50a891df5 126 Pfam PF00586 AIR synthase related protein, N-terminal domain 20 106 2.2E-14 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 PIRSF PIRSF002155 3 214 2.4E-64 T 20-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 Gene3D G3DSA:3.40.50.790 56 147 2.6E-37 T 20-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 PANTHER PTHR23105:SF5 7 212 1.3E-65 T 20-04-2016 APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 212 1.3E-79 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 215 33.406 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 ProSitePatterns PS01199 Ribosomal protein L1 signature. 109 127 - T 20-04-2016 IPR023673 Ribosomal protein L1, conserved site APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 Pfam PF00687 Ribosomal protein L1p/L10e family 17 207 7.8E-44 T 20-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 SUPERFAMILY SSF56808 2 212 1.12E-69 T 20-04-2016 IPR023674 Ribosomal protein L1-like APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 PANTHER PTHR23105 7 212 1.3E-65 T 20-04-2016 APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 Gene3D G3DSA:3.30.190.20 149 212 5.7E-34 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APH_RS04075 311dfe7a669664be48bbe1d4a940e86b 216 Gene3D G3DSA:3.30.190.20 5 55 5.7E-34 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APH_RS05880 db72222cbdcebc43b6bc42db8eddddc4 342 Pfam PF02581 Thiamine monophosphate synthase/TENI 154 321 6.4E-53 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APH_RS05880 db72222cbdcebc43b6bc42db8eddddc4 342 SUPERFAMILY SSF51391 143 337 2.09E-63 T 20-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APH_RS05880 db72222cbdcebc43b6bc42db8eddddc4 342 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 146 339 20.15 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APH_RS05880 db72222cbdcebc43b6bc42db8eddddc4 342 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 158 333 4.3E-51 T 20-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APH_RS05880 db72222cbdcebc43b6bc42db8eddddc4 342 PANTHER PTHR20857 135 337 3.4E-57 T 20-04-2016 APH_RS05880 db72222cbdcebc43b6bc42db8eddddc4 342 Gene3D G3DSA:3.20.20.70 142 338 2.0E-62 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 SMART SM00853 447 591 4.4E-36 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 20-04-2016 IPR014762 DNA mismatch repair, conserved site APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 PANTHER PTHR10073 3 633 1.9E-117 T 20-04-2016 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 308 2.3E-78 T 20-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 123 2.4E-11 T 20-04-2016 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 SMART SM01340 208 328 6.8E-47 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 Gene3D G3DSA:3.30.230.10 217 327 2.4E-31 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 327 2.0E-35 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 SUPERFAMILY SSF55874 3 211 3.41E-46 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 Pfam PF08676 MutL C terminal dimerisation domain 443 589 3.4E-36 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 631 24.173 T 20-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 Gene3D G3DSA:3.30.565.10 3 211 7.4E-64 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 SUPERFAMILY SSF54211 215 327 7.21E-30 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APH_RS03725 afc12fbb9c74101c204785a06bd13c8c 634 SUPERFAMILY SSF118116 443 633 1.16E-44 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 PANTHER PTHR14136 38 311 4.6E-31 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 32 163 1.31E-27 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 365 441 2.59E-25 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 479 545 2.59E-25 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 136 285 7.85E-30 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 PANTHER PTHR14136:SF0 38 311 4.6E-31 T 20-04-2016 APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 138 198 2.7E-7 T 20-04-2016 IPR001646 Pentapeptide repeat APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 331 414 3.8E-9 T 20-04-2016 IPR001646 Pentapeptide repeat APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 482 544 1.3E-10 T 20-04-2016 IPR001646 Pentapeptide repeat APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 34 96 1.9E-10 T 20-04-2016 IPR001646 Pentapeptide repeat APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF00805 Pentapeptide repeats (8 copies) 204 240 2.9E-6 T 20-04-2016 IPR001646 Pentapeptide repeat APH_RS04700 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF00805 Pentapeptide repeats (8 copies) 253 290 8.5E-7 T 20-04-2016 IPR001646 Pentapeptide repeat APH_RS05385 c92bf80f32963c4bea1afa06b48d05b4 416 Gene3D G3DSA:2.40.160.20 298 391 7.2E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05385 c92bf80f32963c4bea1afa06b48d05b4 416 Gene3D G3DSA:2.40.160.20 40 57 7.2E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05385 c92bf80f32963c4bea1afa06b48d05b4 416 Gene3D G3DSA:2.40.160.20 98 141 7.2E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05385 c92bf80f32963c4bea1afa06b48d05b4 416 SUPERFAMILY SSF56925 241 247 6.28E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05385 c92bf80f32963c4bea1afa06b48d05b4 416 SUPERFAMILY SSF56925 292 374 6.28E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05385 c92bf80f32963c4bea1afa06b48d05b4 416 Pfam PF01617 Surface antigen 39 414 1.5E-50 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.5E-19 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 1.5E-19 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 1.5E-19 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 222 1.5E-19 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 1.5E-19 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.5E-19 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PANTHER PTHR22912:SF158 2 311 3.7E-85 T 20-04-2016 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 SUPERFAMILY SSF51905 7 315 1.18E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 40.034 T 20-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 Gene3D G3DSA:3.50.50.60 128 246 3.1E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 5.4E-13 T 20-04-2016 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.4E-13 T 20-04-2016 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.4E-13 T 20-04-2016 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.4E-13 T 20-04-2016 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 PANTHER PTHR22912 2 311 3.7E-85 T 20-04-2016 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 Gene3D G3DSA:3.50.50.60 6 126 3.1E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 Gene3D G3DSA:3.50.50.60 251 326 3.1E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS03020 3866febe22c8eca0872b8b28e37b04fe 338 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 302 1.3E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS01965 e04db319149c8d949f6bb14aea9ce147 403 PANTHER PTHR30454 5 402 1.5E-93 T 20-04-2016 APH_RS01965 e04db319149c8d949f6bb14aea9ce147 403 PIRSF PIRSF004640 2 403 6.7E-121 T 20-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APH_RS01965 e04db319149c8d949f6bb14aea9ce147 403 Pfam PF04551 GcpE protein 8 395 8.9E-94 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APH_RS01965 e04db319149c8d949f6bb14aea9ce147 403 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5 394 1.0E-94 T 20-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 SMART SM00936 273 363 2.8E-19 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 PANTHER PTHR21581:SF3 47 386 1.2E-73 T 20-04-2016 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 249 1.0E-58 T 20-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 Gene3D G3DSA:2.60.410.10 273 362 6.5E-15 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 Gene3D G3DSA:3.40.710.10 14 271 4.2E-77 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 3.2E-15 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 3.2E-15 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 3.2E-15 T 20-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 SUPERFAMILY SSF69189 273 362 3.14E-15 T 20-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 PANTHER PTHR21581 47 386 1.2E-73 T 20-04-2016 APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 SUPERFAMILY SSF56601 7 272 1.13E-65 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APH_RS04885 434cd55a0b6036ecf2f638257ddd3612 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 361 8.1E-14 T 20-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APH_RS02610 ff879b7701675930d037c1ce5aeb820e 240 PANTHER PTHR21139 4 238 3.3E-54 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APH_RS02610 ff879b7701675930d037c1ce5aeb820e 240 PANTHER PTHR21139:SF2 4 238 3.3E-54 T 20-04-2016 APH_RS02610 ff879b7701675930d037c1ce5aeb820e 240 SUPERFAMILY SSF51351 3 238 3.67E-63 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APH_RS02610 ff879b7701675930d037c1ce5aeb820e 240 Pfam PF00121 Triosephosphate isomerase 4 232 3.5E-53 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APH_RS02610 ff879b7701675930d037c1ce5aeb820e 240 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 236 28.142 T 20-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APH_RS02610 ff879b7701675930d037c1ce5aeb820e 240 Gene3D G3DSA:3.20.20.70 2 238 2.6E-64 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS04440 23f6996f8d78b89548e4e792c95e523f 68 Pfam PF01617 Surface antigen 8 63 4.3E-15 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04440 23f6996f8d78b89548e4e792c95e523f 68 Gene3D G3DSA:2.40.160.20 8 35 7.6E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 Gene3D G3DSA:2.40.160.20 87 132 4.4E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 Gene3D G3DSA:2.40.160.20 303 372 4.4E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 Gene3D G3DSA:2.40.160.20 29 45 4.4E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 SUPERFAMILY SSF56925 88 119 9.16E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 SUPERFAMILY SSF56925 303 377 9.16E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 SUPERFAMILY SSF56925 27 46 9.16E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05130 fe94461bc76f8741bf427afbc70d39b7 429 Pfam PF01617 Surface antigen 27 403 1.2E-75 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 Gene3D G3DSA:3.40.50.2300 1 125 3.2E-29 T 20-04-2016 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 Pfam PF00072 Response regulator receiver domain 3 116 4.6E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.8E-17 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 SUPERFAMILY SSF52172 1 176 5.45E-31 T 20-04-2016 IPR011006 CheY-like superfamily APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 PANTHER PTHR26402 1 227 6.9E-82 T 20-04-2016 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 PANTHER PTHR26402:SF553 1 227 6.9E-82 T 20-04-2016 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 Gene3D G3DSA:1.10.10.10 126 227 1.1E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 SMART SM00448 1 115 3.4E-26 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APH_RS04365 135a447a8f4fbde6119a4be09bcd4803 276 SMART SM00862 148 225 6.3E-17 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 SUPERFAMILY SSF52080 4 144 1.13E-31 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 16.257 T 20-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 141 1.2E-37 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 143 4.2E-28 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 114 144 - T 20-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 PANTHER PTHR12934 14 140 5.0E-36 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APH_RS01310 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Gene3D G3DSA:3.100.10.10 32 142 1.0E-22 T 20-04-2016 APH_RS02335 60ee24eaab51e4a1c36dbd5d22b38506 281 PANTHER PTHR15362 17 151 7.0E-31 T 20-04-2016 APH_RS02335 60ee24eaab51e4a1c36dbd5d22b38506 281 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 62 84 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_RS02335 60ee24eaab51e4a1c36dbd5d22b38506 281 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 26 198 7.0E-33 T 20-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 APH_RS02335 60ee24eaab51e4a1c36dbd5d22b38506 281 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 210 246 1.1E-9 T 20-04-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal APH_RS02335 60ee24eaab51e4a1c36dbd5d22b38506 281 Pfam PF01066 CDP-alcohol phosphatidyltransferase 22 84 5.8E-13 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_RS02335 60ee24eaab51e4a1c36dbd5d22b38506 281 PANTHER PTHR15362:SF2 17 151 7.0E-31 T 20-04-2016 APH_RS00390 b2626f9ba10f8266608b7e39cc695294 306 Gene3D G3DSA:3.40.50.970 1 306 7.6E-127 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS00390 b2626f9ba10f8266608b7e39cc695294 306 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 1 306 6.7E-146 T 20-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APH_RS00390 b2626f9ba10f8266608b7e39cc695294 306 Pfam PF00676 Dehydrogenase E1 component 3 297 4.6E-101 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APH_RS00390 b2626f9ba10f8266608b7e39cc695294 306 PANTHER PTHR11516:SF40 1 305 2.6E-167 T 20-04-2016 APH_RS00390 b2626f9ba10f8266608b7e39cc695294 306 PANTHER PTHR11516 1 305 2.6E-167 T 20-04-2016 APH_RS00390 b2626f9ba10f8266608b7e39cc695294 306 SUPERFAMILY SSF52518 1 306 2.03E-99 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 SMART SM00738 2 111 4.8E-24 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 Pfam PF02357 Transcription termination factor nusG 4 107 7.8E-17 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 Gene3D G3DSA:3.30.70.940 4 112 3.0E-28 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 Gene3D G3DSA:2.30.30.30 125 179 2.6E-18 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 179 4.9E-46 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 PANTHER PTHR30265 4 181 2.4E-34 T 20-04-2016 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 SUPERFAMILY SSF50104 125 179 1.28E-12 T 20-04-2016 IPR008991 Translation protein SH3-like domain APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 PRINTS PR00338 Transcription termination factor NUSG signature 137 152 3.8E-8 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.8E-8 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 PRINTS PR00338 Transcription termination factor NUSG signature 155 171 3.8E-8 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 179 20.285 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_RS04085 0e7fa52c6d577ca521c4463da0041489 181 SUPERFAMILY SSF82679 3 112 7.19E-28 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APH_RS05530 bd50f8c924adbfe8f2e0bef8bf73d821 300 SUPERFAMILY SSF56925 102 137 2.88E-8 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05530 bd50f8c924adbfe8f2e0bef8bf73d821 300 SUPERFAMILY SSF56925 171 248 2.88E-8 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05530 bd50f8c924adbfe8f2e0bef8bf73d821 300 Pfam PF01617 Surface antigen 39 291 4.4E-20 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05530 bd50f8c924adbfe8f2e0bef8bf73d821 300 Gene3D G3DSA:2.40.160.20 171 291 3.5E-8 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05530 bd50f8c924adbfe8f2e0bef8bf73d821 300 Gene3D G3DSA:2.40.160.20 84 137 3.5E-8 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04750 e00211c561aa6df914f9fa6ad4cd5a81 486 Pfam PF02386 Cation transport protein 69 468 3.3E-36 T 20-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APH_RS04750 e00211c561aa6df914f9fa6ad4cd5a81 486 PANTHER PTHR32024 1 483 3.9E-97 T 20-04-2016 APH_RS04750 e00211c561aa6df914f9fa6ad4cd5a81 486 PANTHER PTHR32024:SF2 1 483 3.9E-97 T 20-04-2016 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 PANTHER PTHR30489:SF8 353 399 1.8E-62 T 20-04-2016 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 PANTHER PTHR30489:SF8 10 335 1.8E-62 T 20-04-2016 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 Pfam PF02687 FtsX-like permease family 259 392 5.9E-11 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 4.7E-110 T 20-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 PANTHER PTHR30489 353 399 1.8E-62 T 20-04-2016 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 PANTHER PTHR30489 10 335 1.8E-62 T 20-04-2016 APH_RS05450 224e6dca7e276a41a615a25fb7e86fff 399 Pfam PF12704 MacB-like periplasmic core domain 25 228 2.8E-16 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APH_RS04580 55b0483239466a5f528a24ead8a8d6dc 368 SMART SM00244 72 249 1.8E-23 T 20-04-2016 IPR001107 Band 7 domain APH_RS04580 55b0483239466a5f528a24ead8a8d6dc 368 TIGRFAM TIGR01933 hflK: HflK protein 74 350 2.7E-78 T 20-04-2016 IPR010201 HflK GO:0016021 APH_RS04580 55b0483239466a5f528a24ead8a8d6dc 368 PANTHER PTHR10264 1 350 2.1E-88 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS04580 55b0483239466a5f528a24ead8a8d6dc 368 SUPERFAMILY SSF117892 140 255 2.35E-18 T 20-04-2016 IPR001107 Band 7 domain APH_RS04580 55b0483239466a5f528a24ead8a8d6dc 368 PANTHER PTHR10264:SF51 1 350 2.1E-88 T 20-04-2016 IPR010201 HflK GO:0016021 APH_RS04580 55b0483239466a5f528a24ead8a8d6dc 368 Pfam PF01145 SPFH domain / Band 7 family 76 262 1.2E-24 T 20-04-2016 IPR001107 Band 7 domain APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 PANTHER PTHR11496:SF61 29 291 6.9E-38 T 20-04-2016 APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 PANTHER PTHR11496 29 291 6.9E-38 T 20-04-2016 APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 Pfam PF13685 Iron-containing alcohol dehydrogenase 31 281 1.6E-53 T 20-04-2016 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|KEGG: 00630+1.1.1.26|MetaCyc: PWY-6349|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00940 APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 Gene3D G3DSA:1.20.1090.10 169 294 3.1E-51 T 20-04-2016 APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 Gene3D G3DSA:1.20.1090.10 363 414 3.1E-51 T 20-04-2016 APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 Gene3D G3DSA:3.40.50.1970 25 167 2.1E-31 T 20-04-2016 APH_RS04790 0c601692c77d382cf8b6f60390a5475f 417 SUPERFAMILY SSF56796 23 335 8.64E-51 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 PANTHER PTHR30478 10 375 3.3E-101 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 PIRSF PIRSF000804 9 375 8.3E-95 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 SMART SM00480 25 371 8.3E-92 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 259 374 1.0E-23 T 20-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 SUPERFAMILY SSF55979 134 256 1.46E-25 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 Gene3D G3DSA:3.10.150.10 261 375 9.2E-28 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 SUPERFAMILY SSF55979 259 375 2.83E-26 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 Gene3D G3DSA:3.10.150.10 135 260 9.2E-29 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 Gene3D G3DSA:3.10.150.10 8 127 2.8E-26 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 255 3.3E-28 T 20-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 SUPERFAMILY SSF55979 10 125 7.59E-23 T 20-04-2016 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 10 374 1.1E-84 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS04355 fbe63a7103d3b759e0d11f493848fc2b 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 10 126 5.0E-28 T 20-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR01900 YidC translocation/secretion protein signature 512 536 7.5E-16 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR01900 YidC translocation/secretion protein signature 492 507 7.5E-16 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR01900 YidC translocation/secretion protein signature 346 362 7.5E-16 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PANTHER PTHR12428 334 470 8.0E-60 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PANTHER PTHR12428 488 556 8.0E-60 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 Pfam PF14849 YidC periplasmic domain 66 349 1.5E-64 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PANTHER PTHR12428:SF14 334 470 8.0E-60 T 20-04-2016 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PANTHER PTHR12428:SF14 488 556 8.0E-60 T 20-04-2016 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 359 2.6E-81 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 360 556 4.8E-59 T 20-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 559 18.867 T 20-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 Pfam PF02096 60Kd inner membrane protein 361 556 4.1E-51 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.2E-18 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 331 351 2.2E-18 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.2E-18 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 248 263 2.2E-18 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS02320 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 422 445 2.2E-18 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PANTHER PTHR12383:SF27 73 127 8.3E-60 T 20-04-2016 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PANTHER PTHR12383:SF27 1 49 8.3E-60 T 20-04-2016 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PANTHER PTHR12383 149 210 8.3E-60 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PANTHER PTHR12383:SF27 149 210 8.3E-60 T 20-04-2016 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 ProSitePatterns PS00761 Signal peptidases I signature 3. 172 185 - T 20-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 17 33 4.2E-23 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 167 186 4.2E-23 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 94 106 4.2E-23 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 Pfam PF00717 Peptidase S24-like 23 118 3.0E-20 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PANTHER PTHR12383 73 127 8.3E-60 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 SUPERFAMILY SSF51306 15 228 3.61E-58 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 PANTHER PTHR12383 1 49 8.3E-60 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 ProSitePatterns PS00760 Signal peptidases I lysine active site. 96 108 - T 20-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 ProSitePatterns PS00501 Signal peptidases I serine active site. 26 33 - T 20-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 1 210 1.7E-46 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 Gene3D G3DSA:2.10.109.10 14 104 6.1E-43 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APH_RS03240 ee42eeec0e69979fe7398cf1c36dd650 231 Gene3D G3DSA:2.10.109.10 167 218 6.1E-43 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 Pfam PF03796 DnaB-like helicase C terminal domain 194 470 9.7E-96 T 20-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 PANTHER PTHR30153 1 415 3.4E-144 T 20-04-2016 APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 PANTHER PTHR30153 432 480 3.4E-144 T 20-04-2016 APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 472 7.6E-140 T 20-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 Gene3D G3DSA:3.40.50.300 181 471 1.9E-86 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 Gene3D G3DSA:1.10.860.10 16 116 8.5E-18 T 20-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 Pfam PF00772 DnaB-like helicase N terminal domain 16 115 1.8E-20 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 SUPERFAMILY SSF52540 193 464 6.44E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01415 c9b0ea66c6e7674473897acb0623dbe6 481 SUPERFAMILY SSF48024 15 125 4.05E-24 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 SUPERFAMILY SSF52540 411 753 1.28E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 SMART SM00382 446 704 2.5E-5 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 Gene3D G3DSA:3.40.50.300 643 708 1.1E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 Gene3D G3DSA:3.40.50.300 555 603 1.1E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 Gene3D G3DSA:3.40.50.300 447 519 1.1E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 193 395 2.8E-57 T 20-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 APH_RS01630 c16cd34616649933ac13400f140ddb6b 801 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 16 797 1.4E-256 T 20-04-2016 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF00586 AIR synthase related protein, N-terminal domain 707 784 0.006 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF00586 AIR synthase related protein, N-terminal domain 311 429 1.2E-11 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF56042 826 985 2.09E-22 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF55326 632 819 7.72E-49 T 20-04-2016 APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF55326 232 431 4.88E-38 T 20-04-2016 APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 213 1001 179.457 T 20-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF56042 443 660 1.12E-46 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 PANTHER PTHR10099:SF2 198 962 2.3E-246 T 20-04-2016 APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 PANTHER PTHR10099 198 962 2.3E-246 T 20-04-2016 APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Gene3D G3DSA:3.30.1330.10 649 814 2.3E-35 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Gene3D G3DSA:3.30.1330.10 255 431 4.1E-27 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF02769 AIR synthase related protein, C-terminal domain 869 966 3.2E-5 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS00935 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF02769 AIR synthase related protein, C-terminal domain 445 593 4.6E-21 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 Pfam PF02911 Formyl transferase, C-terminal domain 204 292 2.7E-16 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 295 29.205 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 Pfam PF00551 Formyl transferase 1 181 8.8E-39 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 SUPERFAMILY SSF50486 204 293 3.53E-14 T 20-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 PANTHER PTHR11138 1 297 3.3E-85 T 20-04-2016 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 Gene3D G3DSA:3.40.50.170 1 203 3.8E-62 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 SUPERFAMILY SSF53328 1 204 2.88E-57 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 289 1.4E-73 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS03810 e1f29c0d74cd6b8d28d58350a46695a9 301 Gene3D G3DSA:3.10.25.10 204 293 7.8E-13 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_RS01510 54b77a51070822e470961ae92a6770a7 633 Gene3D G3DSA:2.40.50.140 41 89 6.3E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01510 54b77a51070822e470961ae92a6770a7 633 Gene3D G3DSA:2.40.50.140 157 199 6.3E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01510 54b77a51070822e470961ae92a6770a7 633 SUPERFAMILY SSF50249 155 199 4.94E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01510 54b77a51070822e470961ae92a6770a7 633 SUPERFAMILY SSF50249 46 87 4.94E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01510 54b77a51070822e470961ae92a6770a7 633 Pfam PF10150 Ribonuclease E/G family 196 466 5.1E-85 T 20-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APH_RS01510 54b77a51070822e470961ae92a6770a7 633 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 19 499 5.6E-137 T 20-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APH_RS01510 54b77a51070822e470961ae92a6770a7 633 PANTHER PTHR30001 8 596 2.8E-167 T 20-04-2016 APH_RS01510 54b77a51070822e470961ae92a6770a7 633 PANTHER PTHR30001:SF1 8 596 2.8E-167 T 20-04-2016 APH_RS00635 a97b7f38dfa8cc730414a8d27457b655 166 Gene3D G3DSA:3.40.30.10 18 165 1.6E-26 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS00635 a97b7f38dfa8cc730414a8d27457b655 166 PANTHER PTHR10681:SF107 59 165 3.2E-19 T 20-04-2016 APH_RS00635 a97b7f38dfa8cc730414a8d27457b655 166 Pfam PF08534 Redoxin 34 151 2.8E-9 T 20-04-2016 IPR013740 Redoxin GO:0016491 APH_RS00635 a97b7f38dfa8cc730414a8d27457b655 166 PANTHER PTHR10681 59 165 3.2E-19 T 20-04-2016 APH_RS00635 a97b7f38dfa8cc730414a8d27457b655 166 SUPERFAMILY SSF52833 43 165 1.75E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 Gene3D G3DSA:3.30.420.140 17 152 1.2E-39 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 SUPERFAMILY SSF53098 17 149 4.7E-35 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 20.252 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 PANTHER PTHR33317:SF1 13 154 1.5E-32 T 20-04-2016 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 Pfam PF03652 Holliday junction resolvase 18 149 1.4E-36 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 149 2.5E-22 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 PANTHER PTHR33317 13 154 1.5E-32 T 20-04-2016 APH_RS01455 5d6c573c60c43b3540ae59f96ebe21bd 166 SMART SM00732 17 117 1.9E-23 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 PANTHER PTHR30349 4 305 1.4E-75 T 20-04-2016 APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 87 3.4E-13 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 PANTHER PTHR30349:SF5 4 305 1.4E-75 T 20-04-2016 APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 307 24.985 T 20-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Pfam PF00589 Phage integrase family 111 292 2.4E-36 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Gene3D G3DSA:1.10.443.10 111 299 1.7E-42 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Gene3D G3DSA:1.10.150.130 6 94 3.3E-20 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APH_RS00185 2bc58b0d79d002e7c47d6cd2be47a1c0 311 SUPERFAMILY SSF56349 8 299 3.53E-47 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 SUPERFAMILY SSF55282 7 176 1.77E-66 T 20-04-2016 IPR022803 Ribosomal protein L5 domain APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 177 36.888 T 20-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 Pfam PF00673 ribosomal L5P family C-terminus 82 175 5.0E-37 T 20-04-2016 IPR031309 Ribosomal protein L5, C-terminal APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 PANTHER PTHR11994 7 175 1.4E-71 T 20-04-2016 APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 Pfam PF00281 Ribosomal protein L5 22 78 1.3E-23 T 20-04-2016 IPR031310 Ribosomal protein L5, N-terminal APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 PIRSF PIRSF002161 1 177 6.8E-58 T 20-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APH_RS01280 7511f68ff27bf1236f0a226ba813554c 177 Gene3D G3DSA:3.30.1440.10 7 177 3.4E-65 T 20-04-2016 IPR022803 Ribosomal protein L5 domain APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 SMART SM01228 544 615 1.3E-34 T 20-04-2016 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 622 39.046 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 PANTHER PTHR11806:SF0 2 618 0.0 T 20-04-2016 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 Pfam PF01134 Glucose inhibited division protein A 5 396 7.1E-157 T 20-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 20-04-2016 IPR020595 MnmG-related, conserved site APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 PANTHER PTHR11806 2 618 0.0 T 20-04-2016 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 Gene3D G3DSA:3.50.50.60 3 174 1.1E-27 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 Gene3D G3DSA:3.50.50.60 484 512 1.1E-27 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 618 1.4E-238 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 20-04-2016 IPR020595 MnmG-related, conserved site APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 SUPERFAMILY SSF51905 2 63 5.46E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 SUPERFAMILY SSF51905 94 260 5.46E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_RS00980 e079d53344d46cddc9cb96cea7508bf3 628 Pfam PF13932 GidA associated domain 403 613 7.9E-65 T 20-04-2016 IPR026904 GidA associated domain 3 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 PANTHER PTHR15184 1 495 2.3E-274 T 20-04-2016 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Gene3D G3DSA:3.40.50.300 96 382 5.1E-112 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 SUPERFAMILY SSF50615 11 94 3.4E-21 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 SUPERFAMILY SSF52540 96 381 3.44E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 PIRSF PIRSF039088 2 506 8.2E-234 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 SUPERFAMILY SSF47917 384 506 5.23E-38 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 PANTHER PTHR15184:SF3 1 495 2.3E-274 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 489 2.2E-38 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 375 1.3E-71 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 499 3.3E-221 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 5.9E-10 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Gene3D G3DSA:1.20.150.20 384 506 5.6E-41 T 20-04-2016 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 503 46.678 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS05425 23bee617ca17d4ac0327def38f8a7755 506 Gene3D G3DSA:2.40.30.20 5 94 3.8E-25 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 Gene3D G3DSA:3.90.1150.10 291 383 2.0E-35 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 Gene3D G3DSA:3.90.1150.10 5 44 2.0E-35 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 PANTHER PTHR11986:SF79 5 383 1.9E-140 T 20-04-2016 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 383 38.729 T 20-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 Pfam PF00202 Aminotransferase class-III 7 379 1.3E-103 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 PANTHER PTHR11986 5 383 1.9E-140 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 SUPERFAMILY SSF53383 2 383 1.31E-115 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS03750 fcdeb7874ab8cddb9e5ad6b95f6ca9e7 386 Gene3D G3DSA:3.40.640.10 45 288 1.3E-69 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS05655 c09cf726938331bb975fda1be5393881 82 Gene3D G3DSA:2.40.160.20 7 82 2.5E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05655 c09cf726938331bb975fda1be5393881 82 Pfam PF01617 Surface antigen 8 82 6.3E-23 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05655 c09cf726938331bb975fda1be5393881 82 SUPERFAMILY SSF56925 8 82 6.67E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 Gene3D G3DSA:3.20.20.70 2 232 1.5E-85 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 PANTHER PTHR30456 1 231 6.4E-90 T 20-04-2016 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 2 231 4.6E-82 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 233 92.69 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 PANTHER PTHR30456:SF0 1 231 6.4E-90 T 20-04-2016 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 232 1.5E-71 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APH_RS03195 f11ded897750ed0b81a5d0a05dc2230b 233 SUPERFAMILY SSF63892 2 232 1.83E-81 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APH_RS00135 dfe8a8a65ba41a373b71cd23bd439f3a 193 Pfam PF01617 Surface antigen 146 193 5.2E-6 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00905 77b848bb9dedcf7711e8ec31f51f5a08 127 Gene3D G3DSA:3.30.460.10 5 106 7.7E-33 T 20-04-2016 APH_RS00905 77b848bb9dedcf7711e8ec31f51f5a08 127 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 5 105 22.035 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APH_RS00905 77b848bb9dedcf7711e8ec31f51f5a08 127 PANTHER PTHR21043 10 105 1.2E-30 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APH_RS00905 77b848bb9dedcf7711e8ec31f51f5a08 127 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 3.4E-31 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APH_RS00905 77b848bb9dedcf7711e8ec31f51f5a08 127 SUPERFAMILY SSF81301 5 106 6.05E-32 T 20-04-2016 APH_RS00905 77b848bb9dedcf7711e8ec31f51f5a08 127 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 5.6E-26 T 20-04-2016 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 PIRSF PIRSF006488 1 75 3.5E-19 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 Pfam PF02609 Exonuclease VII small subunit 9 59 3.0E-18 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 13.632 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 PANTHER PTHR34137 9 69 5.7E-12 T 20-04-2016 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 Gene3D G3DSA:1.10.287.1040 8 72 6.9E-20 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 SUPERFAMILY SSF116842 8 67 5.75E-17 T 20-04-2016 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 2.7E-21 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_RS00375 2390288cfb55fdd8e0ed55a1785fc849 75 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 47 1.0E-10 T 20-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_RS03730 26a202e0772173d336310a674b94f43c 234 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 207 3.3E-28 T 20-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APH_RS03730 26a202e0772173d336310a674b94f43c 234 PANTHER PTHR30625 6 228 6.1E-32 T 20-04-2016 APH_RS03730 26a202e0772173d336310a674b94f43c 234 PANTHER PTHR30625:SF3 6 228 6.1E-32 T 20-04-2016 APH_RS00845 1724483144beed7ac05f65944c560c58 198 PANTHER PTHR34606 5 197 9.4E-18 T 20-04-2016 APH_RS00845 1724483144beed7ac05f65944c560c58 198 Pfam PF04972 BON domain 126 192 4.2E-13 T 20-04-2016 IPR007055 BON domain APH_RS00845 1724483144beed7ac05f65944c560c58 198 Pfam PF04972 BON domain 49 113 7.3E-11 T 20-04-2016 IPR007055 BON domain APH_RS00845 1724483144beed7ac05f65944c560c58 198 SMART SM00749 54 117 11.0 T 20-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APH_RS00845 1724483144beed7ac05f65944c560c58 198 SMART SM00749 130 193 2.5E-8 T 20-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 20-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 Gene3D G3DSA:3.40.640.10 72 276 2.1E-79 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 Pfam PF00155 Aminotransferase class I and II 46 385 1.0E-64 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 Gene3D G3DSA:3.90.1150.10 277 389 1.2E-29 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 PANTHER PTHR13693 3 410 8.5E-203 T 20-04-2016 APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 SUPERFAMILY SSF53383 3 393 1.84E-102 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 PANTHER PTHR13693:SF57 3 410 8.5E-203 T 20-04-2016 APH_RS05025 624e161d970ddcece4ce72006774cbfb 414 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 3 396 3.4E-175 T 20-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 SUPERFAMILY SSF88659 191 285 3.27E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 PANTHER PTHR30376 1 281 7.1E-75 T 20-04-2016 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 SUPERFAMILY SSF88946 9 119 1.02E-34 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 Pfam PF04542 Sigma-70 region 2 51 119 1.7E-15 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 Gene3D G3DSA:1.10.10.10 222 284 1.9E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 231 243 9.91E-19 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 265 276 9.91E-19 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 75 88 9.91E-19 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 99 107 9.91E-19 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 250 265 9.91E-19 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 Pfam PF04545 Sigma-70, region 4 227 277 2.6E-12 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 Gene3D G3DSA:1.10.601.10 11 117 1.5E-33 T 20-04-2016 APH_RS03110 337e9fa2aa6db91dc79f38d8c7028133 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 278 3.6E-29 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_RS04860 5436dd9d8b33b8f6901829d8b71b5459 185 Gene3D G3DSA:3.30.910.20 30 175 1.5E-8 T 20-04-2016 APH_RS04860 5436dd9d8b33b8f6901829d8b71b5459 185 SMART SM00935 15 175 1.2E-32 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APH_RS04860 5436dd9d8b33b8f6901829d8b71b5459 185 SUPERFAMILY SSF111384 34 175 1.31E-19 T 20-04-2016 IPR024930 Skp domain APH_RS04860 5436dd9d8b33b8f6901829d8b71b5459 185 Pfam PF03938 Outer membrane protein (OmpH-like) 16 174 7.9E-21 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APH_RS05525 b0d486be30bb3042b9ac5877089e5351 286 Gene3D G3DSA:2.40.160.20 103 286 1.3E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05525 b0d486be30bb3042b9ac5877089e5351 286 Gene3D G3DSA:2.40.160.20 40 59 1.3E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05525 b0d486be30bb3042b9ac5877089e5351 286 SUPERFAMILY SSF56925 104 135 8.63E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05525 b0d486be30bb3042b9ac5877089e5351 286 SUPERFAMILY SSF56925 166 286 8.63E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05525 b0d486be30bb3042b9ac5877089e5351 286 Pfam PF01617 Surface antigen 42 286 1.3E-39 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05460 2c5c9e71a68b8a49f8dd9d407b073989 166 Pfam PF01617 Surface antigen 98 157 1.3E-10 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04915 c4fcf661fd9327a741c2110a37beee1d 274 SUPERFAMILY SSF56925 26 46 2.43E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04915 c4fcf661fd9327a741c2110a37beee1d 274 SUPERFAMILY SSF56925 158 274 2.43E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04915 c4fcf661fd9327a741c2110a37beee1d 274 SUPERFAMILY SSF56925 95 126 2.43E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04915 c4fcf661fd9327a741c2110a37beee1d 274 Pfam PF01617 Surface antigen 27 274 6.9E-11 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04915 c4fcf661fd9327a741c2110a37beee1d 274 Gene3D G3DSA:2.40.160.20 94 274 3.8E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04915 c4fcf661fd9327a741c2110a37beee1d 274 Gene3D G3DSA:2.40.160.20 28 45 3.8E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01405 1c221053769666830d73e31548d28070 141 PANTHER PTHR11079 1 141 2.0E-39 T 20-04-2016 APH_RS01405 1c221053769666830d73e31548d28070 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 81 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APH_RS01405 1c221053769666830d73e31548d28070 141 SUPERFAMILY SSF53927 1 138 3.51E-44 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APH_RS01405 1c221053769666830d73e31548d28070 141 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 138 38.212 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APH_RS01405 1c221053769666830d73e31548d28070 141 Pfam PF14437 MafB19-like deaminase 4 138 3.4E-25 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APH_RS01405 1c221053769666830d73e31548d28070 141 Gene3D G3DSA:3.40.140.10 1 136 1.2E-46 T 20-04-2016 APH_RS02795 63c3e0e8988a0f44e965eb4941a92f86 234 PANTHER PTHR12277 29 212 1.3E-54 T 20-04-2016 APH_RS02795 63c3e0e8988a0f44e965eb4941a92f86 234 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 50 200 2.9E-10 T 20-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APH_RS02795 63c3e0e8988a0f44e965eb4941a92f86 234 PANTHER PTHR12277:SF79 29 212 1.3E-54 T 20-04-2016 APH_RS02795 63c3e0e8988a0f44e965eb4941a92f86 234 Gene3D G3DSA:3.40.50.1820 3 223 4.5E-59 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS02795 63c3e0e8988a0f44e965eb4941a92f86 234 SUPERFAMILY SSF53474 3 216 8.77E-48 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS03200 34a7c3b1c6dc91c5222c1146d56808a9 178 SUPERFAMILY SSF52374 3 177 1.28E-31 T 20-04-2016 APH_RS03200 34a7c3b1c6dc91c5222c1146d56808a9 178 Pfam PF01467 Cytidylyltransferase-like 5 176 3.8E-19 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APH_RS03200 34a7c3b1c6dc91c5222c1146d56808a9 178 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 62 2.9E-10 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APH_RS03200 34a7c3b1c6dc91c5222c1146d56808a9 178 Gene3D G3DSA:3.40.50.620 3 177 4.7E-36 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS03200 34a7c3b1c6dc91c5222c1146d56808a9 178 PANTHER PTHR39321 1 145 1.9E-25 T 20-04-2016 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 Gene3D G3DSA:2.70.210.12 2 153 7.9E-54 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 309 4.3E-12 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.8E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 8.8E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 8.8E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.8E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 Pfam PF01926 50S ribosome-binding GTPase 161 280 5.2E-25 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 SUPERFAMILY SSF52540 154 308 1.06E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 SUPERFAMILY SSF82051 3 158 3.27E-52 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PANTHER PTHR11702 1 292 1.4E-131 T 20-04-2016 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 Gene3D G3DSA:3.40.50.300 161 301 7.8E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 310 1.0E-130 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 Hamap MF_01454 GTPase Obg [obg]. 2 325 43.907 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PANTHER PTHR11702:SF3 1 292 1.4E-131 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 20-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 Pfam PF01018 GTP1/OBG 3 158 2.9E-56 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APH_RS02885 ef4e4efd390fa1cf94d59c7be6d19456 352 PIRSF PIRSF002401 1 349 1.2E-125 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APH_RS04690 01226083a1245345314701ee81808213 362 SUPERFAMILY SSF56925 100 131 7.06E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04690 01226083a1245345314701ee81808213 362 SUPERFAMILY SSF56925 323 355 7.06E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04690 01226083a1245345314701ee81808213 362 SUPERFAMILY SSF56925 39 58 7.06E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04690 01226083a1245345314701ee81808213 362 Pfam PF01617 Surface antigen 39 359 1.2E-49 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04690 01226083a1245345314701ee81808213 362 Gene3D G3DSA:2.40.160.20 99 144 2.7E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04690 01226083a1245345314701ee81808213 362 Gene3D G3DSA:2.40.160.20 41 57 2.7E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04690 01226083a1245345314701ee81808213 362 Gene3D G3DSA:2.40.160.20 323 354 2.7E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04995 51b88f8b930c476878f2ff74730477e1 370 SUPERFAMILY SSF56925 254 370 1.07E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04995 51b88f8b930c476878f2ff74730477e1 370 SUPERFAMILY SSF56925 43 74 1.07E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04995 51b88f8b930c476878f2ff74730477e1 370 Gene3D G3DSA:2.40.160.20 254 370 4.3E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04995 51b88f8b930c476878f2ff74730477e1 370 Gene3D G3DSA:2.40.160.20 42 87 4.3E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04995 51b88f8b930c476878f2ff74730477e1 370 Pfam PF01617 Surface antigen 4 370 2.4E-74 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS03220 934c63d4cd8d660ff93f2bd96e168652 154 Gene3D G3DSA:3.40.30.10 3 154 6.5E-44 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS03220 934c63d4cd8d660ff93f2bd96e168652 154 PIRSF PIRSF000239 1 154 1.5E-24 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APH_RS03220 934c63d4cd8d660ff93f2bd96e168652 154 PANTHER PTHR10681:SF113 6 154 6.4E-39 T 20-04-2016 APH_RS03220 934c63d4cd8d660ff93f2bd96e168652 154 PANTHER PTHR10681 6 154 6.4E-39 T 20-04-2016 APH_RS03220 934c63d4cd8d660ff93f2bd96e168652 154 Pfam PF00578 AhpC/TSA family 6 132 5.3E-32 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APH_RS03220 934c63d4cd8d660ff93f2bd96e168652 154 SUPERFAMILY SSF52833 4 154 1.43E-46 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 SUPERFAMILY SSF56112 184 409 1.33E-31 T 20-04-2016 IPR011009 Protein kinase-like domain APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 SUPERFAMILY SSF56112 81 143 1.33E-31 T 20-04-2016 IPR011009 Protein kinase-like domain APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 Gene3D G3DSA:3.90.1200.10 174 295 6.4E-9 T 20-04-2016 APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 29 413 2.0E-147 T 20-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 Pfam PF03109 ABC1 family 98 215 4.5E-31 T 20-04-2016 IPR004147 UbiB domain APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 PANTHER PTHR10566:SF79 8 405 2.5E-127 T 20-04-2016 APH_RS03895 5ef363f77d4ae9a16f05554aacdd39cf 483 PANTHER PTHR10566 8 405 2.5E-127 T 20-04-2016 APH_RS05840 0a9d481fd4b24f9abdf43973e25efde3 282 SUPERFAMILY SSF48013 18 150 2.49E-24 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APH_RS05840 0a9d481fd4b24f9abdf43973e25efde3 282 Pfam PF01029 NusB family 21 150 1.8E-26 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APH_RS05840 0a9d481fd4b24f9abdf43973e25efde3 282 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 20 151 1.9E-29 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 APH_RS05840 0a9d481fd4b24f9abdf43973e25efde3 282 Gene3D G3DSA:1.10.940.10 18 152 1.5E-27 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 Gene3D G3DSA:2.40.160.20 29 45 4.8E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 Gene3D G3DSA:2.40.160.20 87 132 4.8E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 Gene3D G3DSA:2.40.160.20 305 374 4.8E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 SUPERFAMILY SSF56925 305 374 2.15E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 SUPERFAMILY SSF56925 88 119 2.15E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 SUPERFAMILY SSF56925 27 46 2.15E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05075 968c8657f5bd64f0440b42ca1c22b46e 383 Pfam PF01617 Surface antigen 27 376 1.3E-70 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS01490 675c3d3fe10e9d5a9f149630ab96947a 103 Pfam PF03334 Na+/H+ antiporter subunit 11 88 2.5E-19 T 20-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 APH_RS01490 675c3d3fe10e9d5a9f149630ab96947a 103 PANTHER PTHR34703 1 77 6.5E-12 T 20-04-2016 APH_RS01490 675c3d3fe10e9d5a9f149630ab96947a 103 PANTHER PTHR34703:SF1 1 77 6.5E-12 T 20-04-2016 APH_RS04400 95721dacc69213f13de8fff03f541124 158 Gene3D G3DSA:3.90.1180.10 3 142 4.2E-54 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APH_RS04400 95721dacc69213f13de8fff03f541124 158 PANTHER PTHR11545 1 142 6.3E-57 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_RS04400 95721dacc69213f13de8fff03f541124 158 Pfam PF00572 Ribosomal protein L13 14 138 2.8E-51 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_RS04400 95721dacc69213f13de8fff03f541124 158 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 24.031 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_RS04400 95721dacc69213f13de8fff03f541124 158 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 2.2E-53 T 20-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APH_RS04400 95721dacc69213f13de8fff03f541124 158 PIRSF PIRSF002181 2 155 1.6E-44 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_RS04400 95721dacc69213f13de8fff03f541124 158 SUPERFAMILY SSF52161 1 140 3.53E-51 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APH_RS01800 b9a69400cb0fe466258ae75d7ab21d2e 559 Gene3D G3DSA:2.40.160.10 276 310 8.1E-11 T 20-04-2016 IPR023614 Porin domain APH_RS01800 b9a69400cb0fe466258ae75d7ab21d2e 559 Gene3D G3DSA:2.40.160.10 103 162 8.1E-11 T 20-04-2016 IPR023614 Porin domain APH_RS01800 b9a69400cb0fe466258ae75d7ab21d2e 559 Gene3D G3DSA:2.40.160.10 355 559 8.1E-11 T 20-04-2016 IPR023614 Porin domain APH_RS01800 b9a69400cb0fe466258ae75d7ab21d2e 559 Pfam PF13609 Gram-negative porin 66 513 3.4E-11 T 20-04-2016 APH_RS01800 b9a69400cb0fe466258ae75d7ab21d2e 559 SUPERFAMILY SSF56935 354 559 5.49E-12 T 20-04-2016 APH_RS01800 b9a69400cb0fe466258ae75d7ab21d2e 559 SUPERFAMILY SSF56935 247 306 5.49E-12 T 20-04-2016 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PANTHER PTHR30009 31 410 1.5E-133 T 20-04-2016 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PANTHER PTHR30009 456 621 1.5E-133 T 20-04-2016 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 306 321 1.16E-5 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 106 129 1.16E-5 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 387 406 1.16E-5 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 182 197 1.16E-5 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 344 361 1.16E-5 T 20-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 Pfam PF01578 Cytochrome C assembly protein 83 290 7.2E-33 T 20-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PANTHER PTHR30009:SF0 31 410 1.5E-133 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PANTHER PTHR30009:SF0 456 621 1.5E-133 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 303 322 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 287 303 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 74 100 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 203 229 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 237 257 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 267 287 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 125 142 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 152 174 2.38E-65 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05140 cda01e79fc73a06ed3efb92ffa5847ba 637 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 308 621 1.7E-52 T 20-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 SMART SM00739 3 30 0.0021 T 20-04-2016 IPR005824 KOW APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 PANTHER PTHR12903 3 104 9.2E-27 T 20-04-2016 APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 Gene3D G3DSA:2.30.30.30 3 92 4.1E-16 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 SUPERFAMILY SSF50104 3 102 1.02E-24 T 20-04-2016 IPR008991 Translation protein SH3-like domain APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 15.695 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 20-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 Pfam PF00467 KOW motif 7 36 2.4E-6 T 20-04-2016 IPR005824 KOW APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 102 8.8E-18 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01275 ac0a94f4c7a1698eb411f4b20baf5dac 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 102 2.6E-27 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 SUPERFAMILY SSF55120 1 246 5.9E-77 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 PANTHER PTHR11142:SF0 1 246 6.9E-83 T 20-04-2016 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 PIRSF PIRSF001430 1 246 6.1E-71 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 Pfam PF01416 tRNA pseudouridine synthase 145 246 1.9E-27 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 Pfam PF01416 tRNA pseudouridine synthase 5 105 1.1E-10 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 246 33.377 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 241 2.4E-60 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 Gene3D G3DSA:3.30.70.580 1 107 2.0E-32 T 20-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 PANTHER PTHR11142 1 246 6.9E-83 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS02190 00543840dd0ec4eff7d55911a739e373 246 Gene3D G3DSA:3.30.70.660 109 244 6.1E-45 T 20-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 143 9.0E-29 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 3.3E-30 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 PANTHER PTHR22881 43 154 3.1E-27 T 20-04-2016 APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 Gene3D G3DSA:3.40.390.30 18 153 9.7E-36 T 20-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 148 19.036 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 20-04-2016 IPR020549 Endoribonuclease YbeY, conserved site APH_RS05220 f93a080d88f97625164ea1c143b111cc 154 SUPERFAMILY SSF55486 11 151 3.17E-36 T 20-04-2016 APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 20-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 Gene3D G3DSA:1.10.455.10 10 160 4.5E-51 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 SUPERFAMILY SSF47973 2 153 1.1E-46 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 160 29.933 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 Pfam PF00177 Ribosomal protein S7p/S5e 1 153 1.2E-50 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 PIRSF PIRSF002122 9 160 1.4E-48 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 159 1.1E-51 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APH_RS04110 07562a5d7e27b0ebc23db161aed3848b 160 PANTHER PTHR11205 1 160 1.7E-48 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 74 4.4E-27 T 20-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 Gene3D G3DSA:2.40.50.140 5 74 2.0E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 PANTHER PTHR10744:SF1 6 75 7.5E-18 T 20-04-2016 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 6.0E-26 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 76 17.632 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 Pfam PF00366 Ribosomal protein S17 8 74 4.9E-22 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 7.3E-7 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 7.3E-7 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 7.3E-7 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 PANTHER PTHR10744 6 75 7.5E-18 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01265 e8fcb63432d5aa301d8b40421cdf1eeb 76 SUPERFAMILY SSF50249 5 75 1.03E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 SUPERFAMILY SSF50715 6 193 6.45E-52 T 20-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 11 187 1.0E-48 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Gene3D G3DSA:2.170.120.20 102 193 4.3E-25 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 99 2.0E-38 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Pfam PF01386 Ribosomal L25p family 11 96 9.4E-23 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 7 189 28.155 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 188 7.3E-25 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Gene3D G3DSA:2.40.240.10 6 98 1.8E-27 T 20-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APH_RS05275 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 PANTHER PTHR33284 2 201 8.2E-52 T 20-04-2016 APH_RS01125 78a2e9494ba48c764a2456ac0896d85c 293 Pfam PF01145 SPFH domain / Band 7 family 77 238 2.9E-18 T 20-04-2016 IPR001107 Band 7 domain APH_RS01125 78a2e9494ba48c764a2456ac0896d85c 293 PANTHER PTHR10264:SF46 56 238 1.9E-50 T 20-04-2016 APH_RS01125 78a2e9494ba48c764a2456ac0896d85c 293 SMART SM00244 67 229 6.2E-11 T 20-04-2016 IPR001107 Band 7 domain APH_RS01125 78a2e9494ba48c764a2456ac0896d85c 293 PANTHER PTHR10264 56 238 1.9E-50 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APH_RS01125 78a2e9494ba48c764a2456ac0896d85c 293 SUPERFAMILY SSF117892 105 232 4.84E-12 T 20-04-2016 IPR001107 Band 7 domain APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 SMART SM01001 9 160 6.6E-92 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 PANTHER PTHR11609:SF5 11 160 6.5E-74 T 20-04-2016 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 Pfam PF00731 AIR carboxylase 11 157 9.6E-61 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 PANTHER PTHR11609 11 160 6.5E-74 T 20-04-2016 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 PIRSF PIRSF001338 7 163 2.7E-64 T 20-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 11 164 30.939 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 SUPERFAMILY SSF52255 8 160 1.06E-61 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 Gene3D G3DSA:3.40.50.7700 9 161 2.6E-68 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APH_RS05175 20b94787af9dacd31a728ac4dcab7bb1 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 11 160 1.8E-59 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APH_RS04210 f152bbd8e39eb4fa56f98f06af6fa147 263 Pfam PF12706 Beta-lactamase superfamily domain 45 230 1.9E-28 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04210 f152bbd8e39eb4fa56f98f06af6fa147 263 PANTHER PTHR12553:SF7 1 263 6.4E-50 T 20-04-2016 APH_RS04210 f152bbd8e39eb4fa56f98f06af6fa147 263 SUPERFAMILY SSF56281 1 263 2.36E-43 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04210 f152bbd8e39eb4fa56f98f06af6fa147 263 PANTHER PTHR12553 1 263 6.4E-50 T 20-04-2016 APH_RS04210 f152bbd8e39eb4fa56f98f06af6fa147 263 SMART SM00849 34 209 1.2E-5 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04210 f152bbd8e39eb4fa56f98f06af6fa147 263 Gene3D G3DSA:3.60.15.10 1 263 6.1E-68 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 Pfam PF13624 SurA N-terminal domain 4 147 1.7E-27 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 Gene3D G3DSA:3.10.50.40 269 369 1.2E-12 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 PANTHER PTHR10657 25 158 1.6E-26 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 PANTHER PTHR10657 196 392 1.6E-26 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 SUPERFAMILY SSF54534 221 343 6.54E-13 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 PANTHER PTHR10657:SF13 25 158 1.6E-26 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 PANTHER PTHR10657:SF13 196 392 1.6E-26 T 20-04-2016 APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 SUPERFAMILY SSF109998 197 243 1.84E-16 T 20-04-2016 IPR027304 Trigger factor/SurA domain APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 SUPERFAMILY SSF109998 29 156 1.84E-16 T 20-04-2016 IPR027304 Trigger factor/SurA domain APH_RS02545 2148f23b8cf08da021e18fd472bb3752 619 Pfam PF13145 PPIC-type PPIASE domain 266 357 1.2E-8 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 SUPERFAMILY SSF142984 242 327 2.48E-25 T 20-04-2016 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 Pfam PF10531 SLBB domain 243 294 2.0E-9 T 20-04-2016 IPR019554 Soluble ligand binding domain APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 416 3.0E-186 T 20-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 334 416 7.2E-27 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 345 356 - T 20-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 SUPERFAMILY SSF140490 328 421 9.81E-33 T 20-04-2016 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 SMART SM00928 332 377 9.2E-23 T 20-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 SUPERFAMILY SSF142019 7 241 1.02E-81 T 20-04-2016 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 PANTHER PTHR11780 2 425 1.9E-257 T 20-04-2016 APH_RS01920 ce3b6063742a0591ab828eab9c6163b1 427 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 219 4.4E-48 T 20-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 PANTHER PTHR30447:SF0 1 294 8.4E-99 T 20-04-2016 APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 5 307 6.7E-107 T 20-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 PANTHER PTHR30447 1 294 8.4E-99 T 20-04-2016 APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 SUPERFAMILY SSF56655 4 295 2.08E-76 T 20-04-2016 APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 PIRSF PIRSF004532 2 310 4.0E-97 T 20-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 Gene3D G3DSA:3.30.540.10 5 173 3.8E-52 T 20-04-2016 APH_RS00975 d40765509010e881c6aa8c444f76ca49 311 Gene3D G3DSA:3.30.540.10 174 286 2.1E-14 T 20-04-2016 APH_RS00695 39b38f9c4a3ef5b8163df29640c9a32b 125 SUPERFAMILY SSF55387 13 124 6.45E-23 T 20-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APH_RS00695 39b38f9c4a3ef5b8163df29640c9a32b 125 SMART SM01219 22 125 1.3E-23 T 20-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APH_RS00695 39b38f9c4a3ef5b8163df29640c9a32b 125 Pfam PF01491 Frataxin-like domain 26 123 3.1E-15 T 20-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APH_RS00695 39b38f9c4a3ef5b8163df29640c9a32b 125 Gene3D G3DSA:3.30.920.10 25 123 1.4E-17 T 20-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 Pfam PF01235 Sodium:alanine symporter family 47 432 1.1E-55 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PANTHER PTHR30330:SF3 10 432 1.6E-67 T 20-04-2016 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PANTHER PTHR30330 10 432 1.6E-67 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 343 365 1.7E-11 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 190 208 1.7E-11 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 404 424 1.7E-11 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 79 101 1.7E-11 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS01355 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 305 323 1.7E-11 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 PANTHER PTHR30006:SF4 24 340 1.0E-115 T 20-04-2016 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 Gene3D G3DSA:3.40.190.10 4 126 1.1E-30 T 20-04-2016 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 Gene3D G3DSA:3.40.190.10 276 316 1.1E-30 T 20-04-2016 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 Pfam PF13343 Bacterial extracellular solute-binding protein 80 310 8.1E-23 T 20-04-2016 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 Gene3D G3DSA:3.40.190.10 130 275 8.0E-49 T 20-04-2016 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 SUPERFAMILY SSF53850 27 331 6.52E-74 T 20-04-2016 APH_RS00245 47e37abf652448fbb4000f53eb345193 344 PIRSF PIRSF002825 2 344 8.4E-83 T 20-04-2016 IPR026045 Ferric binding protein APH_RS00245 47e37abf652448fbb4000f53eb345193 344 PANTHER PTHR30006 24 340 1.0E-115 T 20-04-2016 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.2E-11 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.2E-11 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.2E-11 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 SUPERFAMILY SSF143034 2 64 5.76E-19 T 20-04-2016 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.746 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 Pfam PF01632 Ribosomal protein L35 2 58 4.4E-18 T 20-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.0E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 20-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00290 3fd4aca7dea9181d812224aef559f3a5 66 PANTHER PTHR33343 1 66 3.0E-17 T 20-04-2016 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 Gene3D G3DSA:3.20.20.70 9 349 2.6E-109 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 PANTHER PTHR11938:SF47 54 348 2.4E-78 T 20-04-2016 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 SUPERFAMILY SSF51395 5 349 3.05E-86 T 20-04-2016 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 8 348 1.6E-103 T 20-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 PANTHER PTHR11938 54 348 2.4E-78 T 20-04-2016 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 PIRSF PIRSF000164 16 350 7.8E-89 T 20-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 Pfam PF01180 Dihydroorotate dehydrogenase 47 333 5.3E-83 T 20-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 20-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APH_RS04005 2a0052b706ba570585038b74590d1fbf 350 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 285 305 - T 20-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 PANTHER PTHR11993:SF10 12 390 3.8E-244 T 20-04-2016 APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 PANTHER PTHR11993 12 390 3.8E-244 T 20-04-2016 APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 125 395 1.9E-124 T 20-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 48 59 - T 20-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 SUPERFAMILY SSF56762 21 395 1.27E-140 T 20-04-2016 IPR029014 NiFe hydrogenase-like APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 Gene3D G3DSA:1.10.645.10 11 387 7.8E-64 T 20-04-2016 IPR029014 NiFe hydrogenase-like APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 11 395 1.4E-178 T 20-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APH_RS03015 2b351a04629bad722476e0b19e7468f1 395 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 395 48.716 T 20-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APH_RS04765 7067cb2cdd354770d9a52c7b90b50855 199 Pfam PF01617 Surface antigen 83 167 4.3E-20 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04765 7067cb2cdd354770d9a52c7b90b50855 199 Gene3D G3DSA:2.40.160.20 121 159 1.3E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Pfam PF01330 RuvA N terminal domain 1 62 1.6E-15 T 20-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Pfam PF14520 Helix-hairpin-helix domain 73 127 5.8E-8 T 20-04-2016 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 190 21.999 T 20-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF47781 66 134 1.0E-13 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF46929 149 190 7.32E-6 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:1.10.150.20 67 135 7.6E-17 T 20-04-2016 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:2.40.50.140 1 65 5.3E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:1.10.8.10 149 189 3.7E-5 T 20-04-2016 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 PANTHER PTHR33796 2 191 1.1E-35 T 20-04-2016 APH_RS00750 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF50249 1 63 1.41E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00750 fdc66e44c395e418f5267b771e228086 191 Pfam PF07499 RuvA, C-terminal domain 149 190 5.4E-7 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APH_RS04840 5c99618992fe1387480ad761b2507449 436 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 390 1.6E-11 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS04840 5c99618992fe1387480ad761b2507449 436 SUPERFAMILY SSF81442 8 426 2.75E-39 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APH_RS00310 d4acd971906f9df3896f82be7451558d 76 PANTHER PTHR12763 20 72 2.0E-12 T 20-04-2016 APH_RS00310 d4acd971906f9df3896f82be7451558d 76 Gene3D G3DSA:1.10.287.110 21 73 2.6E-16 T 20-04-2016 IPR001623 DnaJ domain APH_RS00310 d4acd971906f9df3896f82be7451558d 76 SUPERFAMILY SSF46565 20 74 3.79E-15 T 20-04-2016 IPR001623 DnaJ domain APH_RS00310 d4acd971906f9df3896f82be7451558d 76 PANTHER PTHR12763:SF28 20 72 2.0E-12 T 20-04-2016 APH_RS00310 d4acd971906f9df3896f82be7451558d 76 SMART SM00271 23 76 7.9E-6 T 20-04-2016 IPR001623 DnaJ domain APH_RS00310 d4acd971906f9df3896f82be7451558d 76 Pfam PF00226 DnaJ domain 27 56 1.1E-7 T 20-04-2016 IPR001623 DnaJ domain APH_RS02725 5a6c5032cced271c1665435ca775bba1 85 Gene3D G3DSA:3.40.50.620 13 64 3.4E-7 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_RS02725 5a6c5032cced271c1665435ca775bba1 85 SUPERFAMILY SSF52374 9 64 1.17E-5 T 20-04-2016 APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 SUPERFAMILY SSF51735 2 251 9.83E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 5.1E-86 T 20-04-2016 APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 Gene3D G3DSA:3.40.50.720 3 197 7.9E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PIRSF PIRSF000094 1 256 7.3E-108 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PANTHER PTHR24322 155 187 1.0E-52 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PANTHER PTHR24322 8 139 1.0E-52 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PANTHER PTHR24322:SF317 155 187 1.0E-52 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APH_RS02085 c1eece1907c4bd56057f9e24797b80b6 269 PANTHER PTHR24322:SF317 8 139 1.0E-52 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APH_RS01500 899c77a959b5b0cb5c10897b82b03f18 146 PANTHER PTHR33932 10 145 4.3E-24 T 20-04-2016 APH_RS01500 899c77a959b5b0cb5c10897b82b03f18 146 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 14 131 7.0E-25 T 20-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein APH_RS01500 899c77a959b5b0cb5c10897b82b03f18 146 PANTHER PTHR33932:SF4 10 145 4.3E-24 T 20-04-2016 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 SUPERFAMILY SSF50022 39 183 1.7E-40 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 3.9E-16 T 20-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 143 155 3.9E-16 T 20-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 3.9E-16 T 20-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 Gene3D G3DSA:2.102.10.10 17 183 6.6E-45 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 PANTHER PTHR10134 20 187 2.1E-74 T 20-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 Pfam PF00355 Rieske [2Fe-2S] domain 66 169 4.0E-13 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 19 183 4.9E-61 T 20-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 APH_RS01770 4ab4691516fe6f613ab844fe455e0bfd 189 PANTHER PTHR10134:SF1 20 187 2.1E-74 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606 215 551 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606 657 1076 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606 19 154 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606 1101 1351 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PIRSF PIRSF036761 14 1600 0.0 T 20-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 SUPERFAMILY SSF51735 1062 1261 3.61E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 SUPERFAMILY SSF51735 922 1024 3.61E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 Gene3D G3DSA:3.40.50.720 1079 1186 6.3E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 Gene3D G3DSA:3.40.50.720 919 1030 6.3E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 92 1594 0.0 T 20-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 SUPERFAMILY SSF53223 736 933 2.11E-25 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606:SF1 215 551 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606:SF1 657 1076 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606:SF1 19 154 0.0 T 20-04-2016 APH_RS02380 2f978dc2d4e0d1d2992ae5514d54339a 1604 PANTHER PTHR11606:SF1 1101 1351 0.0 T 20-04-2016 APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 228 237 - T 20-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 Pfam PF00155 Aminotransferase class I and II 44 363 1.1E-42 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 Gene3D G3DSA:3.40.640.10 61 264 4.4E-74 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 PANTHER PTHR13693 4 367 3.7E-114 T 20-04-2016 APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 Gene3D G3DSA:3.90.1150.10 265 364 1.2E-12 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 SUPERFAMILY SSF53383 26 366 1.1E-86 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS04020 0a24cfa92fb63bb14239acb226c46498 378 PANTHER PTHR13693:SF53 4 367 3.7E-114 T 20-04-2016 APH_RS01285 96f50a92ba7c05328cb384f60ae80ff9 101 SUPERFAMILY SSF57716 3 101 1.43E-35 T 20-04-2016 APH_RS01285 96f50a92ba7c05328cb384f60ae80ff9 101 PANTHER PTHR19836 3 101 4.3E-52 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01285 96f50a92ba7c05328cb384f60ae80ff9 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.46 T 20-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid APH_RS01285 96f50a92ba7c05328cb384f60ae80ff9 101 Gene3D G3DSA:4.10.830.10 41 101 1.2E-30 T 20-04-2016 APH_RS01285 96f50a92ba7c05328cb384f60ae80ff9 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 20-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APH_RS01285 96f50a92ba7c05328cb384f60ae80ff9 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 6.7E-25 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04160 0b829bd6d9c33dcd6713f608b3f99106 209 Gene3D G3DSA:3.40.30.10 11 191 2.6E-47 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS04160 0b829bd6d9c33dcd6713f608b3f99106 209 Pfam PF02630 SCO1/SenC 54 185 3.8E-36 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APH_RS04160 0b829bd6d9c33dcd6713f608b3f99106 209 PANTHER PTHR12151 10 208 9.3E-41 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APH_RS04160 0b829bd6d9c33dcd6713f608b3f99106 209 SUPERFAMILY SSF52833 55 191 2.28E-39 T 20-04-2016 IPR012336 Thioredoxin-like fold APH_RS05505 485708afb4b129a71a3b88558bc11fa1 300 Pfam PF01617 Surface antigen 142 300 6.6E-52 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05505 485708afb4b129a71a3b88558bc11fa1 300 Gene3D G3DSA:2.40.160.20 101 129 9.7E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05505 485708afb4b129a71a3b88558bc11fa1 300 Gene3D G3DSA:2.40.160.20 178 300 9.7E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05505 485708afb4b129a71a3b88558bc11fa1 300 SUPERFAMILY SSF56925 178 300 1.02E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00180 1a884ddb8a63954b532980974504e13d 102 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 1 70 4.3E-17 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_RS00180 1a884ddb8a63954b532980974504e13d 102 PRINTS PR01651 Protein-export SecG membrane protein signature 1 20 7.5E-10 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_RS00180 1a884ddb8a63954b532980974504e13d 102 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 7.5E-10 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_RS00180 1a884ddb8a63954b532980974504e13d 102 PRINTS PR01651 Protein-export SecG membrane protein signature 20 34 7.5E-10 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_RS00180 1a884ddb8a63954b532980974504e13d 102 Pfam PF03840 Preprotein translocase SecG subunit 2 70 2.3E-15 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_RS05515 b7ecee4ccba21d266ec3b6de4d2ca85d 461 SUPERFAMILY SSF56925 339 461 6.02E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05515 b7ecee4ccba21d266ec3b6de4d2ca85d 461 Gene3D G3DSA:2.40.160.20 105 146 7.6E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05515 b7ecee4ccba21d266ec3b6de4d2ca85d 461 Gene3D G3DSA:2.40.160.20 46 63 7.6E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05515 b7ecee4ccba21d266ec3b6de4d2ca85d 461 Gene3D G3DSA:2.40.160.20 345 461 7.6E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05515 b7ecee4ccba21d266ec3b6de4d2ca85d 461 Pfam PF01617 Surface antigen 45 461 5.9E-60 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 8 249 4.3E-107 T 20-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 SUPERFAMILY SSF52540 8 240 3.15E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 PANTHER PTHR24220:SF585 7 251 3.2E-118 T 20-04-2016 APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 Pfam PF00005 ABC transporter 23 177 1.1E-28 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 PANTHER PTHR24220 7 251 3.2E-118 T 20-04-2016 APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 SMART SM00382 30 225 2.3E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APH_RS01375 e4eb75af583ed0fe17b11f27e760e914 252 Gene3D G3DSA:3.40.50.300 7 248 2.2E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04625 13159911750498041c11f30ed56e2daf 395 Gene3D G3DSA:2.40.160.20 310 379 4.1E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04625 13159911750498041c11f30ed56e2daf 395 Gene3D G3DSA:2.40.160.20 87 132 4.1E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04625 13159911750498041c11f30ed56e2daf 395 Gene3D G3DSA:2.40.160.20 29 45 4.1E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04625 13159911750498041c11f30ed56e2daf 395 Pfam PF01617 Surface antigen 27 391 6.9E-73 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04625 13159911750498041c11f30ed56e2daf 395 SUPERFAMILY SSF56925 88 119 2.88E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04625 13159911750498041c11f30ed56e2daf 395 SUPERFAMILY SSF56925 310 383 2.88E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04625 13159911750498041c11f30ed56e2daf 395 SUPERFAMILY SSF56925 27 46 2.88E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 318 8.3E-35 T 20-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 320 29.495 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PIRSF PIRSF000114 1 323 6.0E-85 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 SUPERFAMILY SSF51735 2 179 3.82E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 Gene3D G3DSA:1.10.1040.10 183 322 1.3E-36 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 6.4E-32 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 6.4E-32 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 6.4E-32 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 6.4E-32 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 6.4E-32 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 6.4E-32 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 SUPERFAMILY SSF48179 178 322 2.04E-36 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 159 3.5E-40 T 20-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PANTHER PTHR11728:SF1 2 322 8.7E-85 T 20-04-2016 APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 Gene3D G3DSA:3.40.50.720 2 182 7.4E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS00865 eb0cb68afa6a8e310db145b60af472dc 324 PANTHER PTHR11728 2 322 8.7E-85 T 20-04-2016 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 SUPERFAMILY SSF55681 1 280 3.23E-112 T 20-04-2016 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.351 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:1.20.58.180 206 278 5.4E-26 T 20-04-2016 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:3.30.930.10 2 204 6.5E-80 T 20-04-2016 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 PANTHER PTHR30075 2 278 1.8E-133 T 20-04-2016 APH_RS00065 edf8ab53d06a80576ec92ffc231985d1 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 1.5E-123 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 SUPERFAMILY SSF55681 1 280 3.23E-112 T 20-04-2016 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.351 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:1.20.58.180 206 278 5.4E-26 T 20-04-2016 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.3E-49 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:3.30.930.10 2 204 6.5E-80 T 20-04-2016 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 PANTHER PTHR30075 2 278 1.8E-133 T 20-04-2016 APH_RS00740 edf8ab53d06a80576ec92ffc231985d1 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 1.5E-123 T 20-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_RS02155 87450a0a6234b82cddb4cf3f25141601 128 SUPERFAMILY SSF51344 3 85 1.12E-12 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02155 87450a0a6234b82cddb4cf3f25141601 128 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 3.7E-15 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02155 87450a0a6234b82cddb4cf3f25141601 128 Gene3D G3DSA:2.60.15.10 1 84 8.2E-11 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APH_RS02065 9d5fa08f63f806fe7ff5afa19a471020 461 PANTHER PTHR28641 74 460 1.4E-130 T 20-04-2016 APH_RS02065 9d5fa08f63f806fe7ff5afa19a471020 461 PANTHER PTHR28641:SF1 74 460 1.4E-130 T 20-04-2016 APH_RS02065 9d5fa08f63f806fe7ff5afa19a471020 461 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 93 431 7.9E-134 T 20-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 APH_RS01740 b76a5e6dd5bbe5836ac02a6cad65d51d 81 Gene3D G3DSA:2.40.50.140 4 77 1.3E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01740 b76a5e6dd5bbe5836ac02a6cad65d51d 81 PANTHER PTHR33370 4 81 2.4E-17 T 20-04-2016 APH_RS01740 b76a5e6dd5bbe5836ac02a6cad65d51d 81 SUPERFAMILY SSF50249 3 80 3.0E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS01740 b76a5e6dd5bbe5836ac02a6cad65d51d 81 Pfam PF01176 Translation initiation factor 1A / IF-1 10 76 7.0E-16 T 20-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APH_RS01740 b76a5e6dd5bbe5836ac02a6cad65d51d 81 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 76 4.0E-19 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APH_RS05890 a9ef6241365381ffa234599ff8741db2 160 Pfam PF01617 Surface antigen 64 158 7.6E-29 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05890 a9ef6241365381ffa234599ff8741db2 160 Gene3D G3DSA:2.40.160.20 91 156 1.6E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05890 a9ef6241365381ffa234599ff8741db2 160 SUPERFAMILY SSF56925 91 153 1.73E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05085 fbf283160d5e68078abffcad1ceeeae8 300 SUPERFAMILY SSF51569 34 299 3.11E-62 T 20-04-2016 APH_RS05085 fbf283160d5e68078abffcad1ceeeae8 300 Gene3D G3DSA:3.20.20.70 19 299 7.5E-76 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS05085 fbf283160d5e68078abffcad1ceeeae8 300 Pfam PF01791 DeoC/LacD family aldolase 41 283 5.4E-29 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APH_RS05085 fbf283160d5e68078abffcad1ceeeae8 300 SMART SM01133 40 283 5.2E-43 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APH_RS05085 fbf283160d5e68078abffcad1ceeeae8 300 PIRSF PIRSF038992 20 298 3.6E-57 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 288 2.2E-81 T 20-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 PANTHER PTHR10982 2 312 1.7E-111 T 20-04-2016 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 SUPERFAMILY SSF55048 127 195 7.06E-13 T 20-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 SUPERFAMILY SSF52151 1 120 1.23E-69 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 SUPERFAMILY SSF52151 188 305 1.23E-69 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 Pfam PF00698 Acyl transferase domain 2 288 1.1E-31 T 20-04-2016 IPR014043 Acyl transferase APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 Gene3D G3DSA:3.40.366.10 195 297 1.4E-65 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 Gene3D G3DSA:3.40.366.10 1 120 1.4E-65 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 PIRSF PIRSF000446 1 308 1.5E-79 T 20-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 Gene3D G3DSA:3.30.70.250 126 194 5.5E-20 T 20-04-2016 APH_RS00435 b5587df1d6755dbbf3b71763fe80c916 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1 303 3.2E-39 T 20-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APH_RS04185 8b4e9341cde3dbac3f9e75296670ff8b 269 PANTHER PTHR11807:SF2 3 89 2.9E-19 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APH_RS04185 8b4e9341cde3dbac3f9e75296670ff8b 269 SUPERFAMILY SSF52402 3 67 4.57E-17 T 20-04-2016 APH_RS04185 8b4e9341cde3dbac3f9e75296670ff8b 269 PANTHER PTHR11807 3 89 2.9E-19 T 20-04-2016 APH_RS04185 8b4e9341cde3dbac3f9e75296670ff8b 269 Pfam PF01171 PP-loop family 3 64 4.4E-16 T 20-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APH_RS04340 8b4e9341cde3dbac3f9e75296670ff8b 269 PANTHER PTHR11807:SF2 3 89 2.9E-19 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APH_RS04340 8b4e9341cde3dbac3f9e75296670ff8b 269 SUPERFAMILY SSF52402 3 67 4.57E-17 T 20-04-2016 APH_RS04340 8b4e9341cde3dbac3f9e75296670ff8b 269 PANTHER PTHR11807 3 89 2.9E-19 T 20-04-2016 APH_RS04340 8b4e9341cde3dbac3f9e75296670ff8b 269 Pfam PF01171 PP-loop family 3 64 4.4E-16 T 20-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 SUPERFAMILY SSF50447 5 217 1.24E-63 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 ProSitePatterns PS00474 Ribosomal protein L3 signature. 105 128 - T 20-04-2016 IPR019926 Ribosomal protein L3, conserved site APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 Gene3D G3DSA:2.40.30.10 162 195 3.7E-4 T 20-04-2016 APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 Pfam PF00297 Ribosomal protein L3 103 186 9.8E-15 T 20-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 PANTHER PTHR11229 6 213 4.0E-76 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 209 4.0E-70 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01220 524f5c36419fdee23843fcaa1e60e9e0 228 Gene3D G3DSA:4.10.960.10 83 161 2.7E-29 T 20-04-2016 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 33.806 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 PANTHER PTHR10286 6 175 1.2E-60 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 SUPERFAMILY SSF50324 3 172 4.32E-60 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 Gene3D G3DSA:3.90.80.10 4 174 4.2E-54 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 PANTHER PTHR10286:SF15 6 175 1.2E-60 T 20-04-2016 APH_RS04375 074c286b4906f14ca1bedff24ff26812 178 Pfam PF00719 Inorganic pyrophosphatase 18 170 3.1E-48 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APH_RS05730 7eea1d35b34fe608df93800a9750003a 223 Pfam PF04335 VirB8 protein 15 221 1.0E-58 T 20-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 APH_RS05730 7eea1d35b34fe608df93800a9750003a 223 SUPERFAMILY SSF54427 84 222 1.05E-34 T 20-04-2016 IPR032710 NTF2-like domain APH_RS05730 7eea1d35b34fe608df93800a9750003a 223 PIRSF PIRSF003299 2 223 7.8E-89 T 20-04-2016 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 Pfam PF02780 Transketolase, C-terminal domain 197 319 6.6E-42 T 20-04-2016 IPR033248 Transketolase, C-terminal domain APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 SMART SM00861 4 179 9.9E-64 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 Gene3D G3DSA:3.40.50.920 198 327 5.2E-47 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 PANTHER PTHR11624 4 329 5.4E-176 T 20-04-2016 IPR033247 Transketolase family APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 Gene3D G3DSA:3.40.50.970 2 197 1.4E-90 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 1.3E-47 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 SUPERFAMILY SSF52922 193 329 1.31E-44 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APH_RS05300 12042c62ff1063a8e369d729b37a2ad8 332 SUPERFAMILY SSF52518 2 207 4.17E-67 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 Pfam PF02502 Ribose/Galactose Isomerase 7 143 1.4E-47 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 PIRSF PIRSF005384 5 145 2.4E-49 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 Gene3D G3DSA:3.40.1400.10 5 143 2.5E-53 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 7 144 2.8E-50 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 144 5.1E-46 T 20-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 SUPERFAMILY SSF89623 5 144 4.45E-48 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APH_RS02685 9049b2000337ea6e7afe2a6c17b294d7 145 PANTHER PTHR30345 1 145 8.7E-56 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 Gene3D G3DSA:2.40.160.20 309 425 1.7E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 Gene3D G3DSA:2.40.160.20 87 134 1.7E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 Gene3D G3DSA:2.40.160.20 29 45 1.7E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 Pfam PF01617 Surface antigen 27 425 1.2E-80 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 SUPERFAMILY SSF56925 309 425 4.19E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 SUPERFAMILY SSF56925 88 119 4.19E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04960 5aed72840da6e6dfbc1113816fb6136a 425 SUPERFAMILY SSF56925 27 46 4.19E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Pfam PF13361 UvrD-like helicase C-terminal domain 439 820 4.6E-21 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Gene3D G3DSA:3.40.50.300 728 845 3.3E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Gene3D G3DSA:3.40.50.300 444 578 3.3E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Gene3D G3DSA:3.40.50.300 10 69 1.1E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Gene3D G3DSA:3.40.50.300 318 433 1.1E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Gene3D G3DSA:3.40.50.300 117 176 1.1E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 427 2.2E-46 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070:SF23 798 820 5.5E-72 T 20-04-2016 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070:SF23 283 489 5.5E-72 T 20-04-2016 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070:SF23 515 775 5.5E-72 T 20-04-2016 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070:SF23 25 82 5.5E-72 T 20-04-2016 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070:SF23 109 201 5.5E-72 T 20-04-2016 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 SUPERFAMILY SSF52540 10 73 6.24E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 SUPERFAMILY SSF52540 799 825 6.24E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 SUPERFAMILY SSF52540 109 187 6.24E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 SUPERFAMILY SSF52540 308 766 6.24E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070 798 820 5.5E-72 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070 283 489 5.5E-72 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070 515 775 5.5E-72 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070 25 82 5.5E-72 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APH_RS01115 e4a8c3879ec39637d7eb4d07e466180e 864 PANTHER PTHR11070 109 201 5.5E-72 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APH_RS04025 eb6410bbc9386773de058f01dedd71ac 430 SUPERFAMILY SSF56925 120 151 2.04E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04025 eb6410bbc9386773de058f01dedd71ac 430 SUPERFAMILY SSF56925 307 430 2.04E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04025 eb6410bbc9386773de058f01dedd71ac 430 Gene3D G3DSA:2.40.160.20 61 77 5.3E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04025 eb6410bbc9386773de058f01dedd71ac 430 Gene3D G3DSA:2.40.160.20 119 183 5.3E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04025 eb6410bbc9386773de058f01dedd71ac 430 Gene3D G3DSA:2.40.160.20 313 430 5.3E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04025 eb6410bbc9386773de058f01dedd71ac 430 Pfam PF01617 Surface antigen 60 430 4.0E-61 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 102 1.2E-5 T 20-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 Pfam PF00361 Proton-conducting membrane transporter 134 428 2.2E-45 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PANTHER PTHR22773:SF49 1 495 9.4E-99 T 20-04-2016 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PANTHER PTHR22773 1 495 9.4E-99 T 20-04-2016 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 334 353 2.5E-11 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.5E-11 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 2.5E-11 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 2.5E-11 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS00205 c79a726657427f441c70c8533ea4c7df 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 2.5E-11 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 134 1.7E-27 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 SUPERFAMILY SSF48300 5 65 9.68E-8 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 SUPERFAMILY SSF54736 64 134 1.53E-16 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 134 17.828 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 84 134 7.0E-7 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 64 134 6.7E-21 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APH_RS04065 0be1a67466a8d520da9ce6b34db261a0 134 Gene3D G3DSA:3.30.1390.10 58 134 3.8E-23 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APH_RS03885 c4c45641562edca960de6823df2fe07a 286 Gene3D G3DSA:3.40.50.1980 22 181 4.0E-35 T 20-04-2016 APH_RS03885 c4c45641562edca960de6823df2fe07a 286 PANTHER PTHR30477 1 270 1.1E-42 T 20-04-2016 APH_RS03885 c4c45641562edca960de6823df2fe07a 286 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 284 8.3E-46 T 20-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APH_RS03885 c4c45641562edca960de6823df2fe07a 286 Gene3D G3DSA:3.40.50.1980 182 286 9.7E-14 T 20-04-2016 APH_RS03885 c4c45641562edca960de6823df2fe07a 286 PANTHER PTHR30477:SF1 1 270 1.1E-42 T 20-04-2016 APH_RS03885 c4c45641562edca960de6823df2fe07a 286 SUPERFAMILY SSF53807 23 285 3.14E-55 T 20-04-2016 APH_RS00510 039e1f723ddd6c2bd02c95c04ed8df7c 150 Hamap MF_00042 Ribonuclease H [rnhA]. 3 150 30.117 T 20-04-2016 IPR022892 Ribonuclease H GO:0004523 APH_RS00510 039e1f723ddd6c2bd02c95c04ed8df7c 150 SUPERFAMILY SSF53098 4 145 7.46E-52 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00510 039e1f723ddd6c2bd02c95c04ed8df7c 150 Pfam PF00075 RNase H 5 143 1.0E-49 T 20-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APH_RS00510 039e1f723ddd6c2bd02c95c04ed8df7c 150 Gene3D G3DSA:3.30.420.10 3 146 7.0E-56 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS00510 039e1f723ddd6c2bd02c95c04ed8df7c 150 PANTHER PTHR10642 1 148 5.4E-51 T 20-04-2016 APH_RS04140 d2815f91cbadf689c85b228b452f108f 234 PANTHER PTHR21427 137 220 1.6E-20 T 20-04-2016 APH_RS04140 d2815f91cbadf689c85b228b452f108f 234 Pfam PF08511 COQ9 137 212 1.6E-25 T 20-04-2016 IPR013718 COQ9 UniPathway: UPA00232 APH_RS04140 d2815f91cbadf689c85b228b452f108f 234 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 32 216 2.2E-39 T 20-04-2016 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 UniPathway: UPA00232 APH_RS04695 34e617bf24182bb7d479748d141ff453 365 Gene3D G3DSA:2.40.160.20 249 365 2.9E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04695 34e617bf24182bb7d479748d141ff453 365 Gene3D G3DSA:2.40.160.20 47 92 2.9E-18 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04695 34e617bf24182bb7d479748d141ff453 365 Pfam PF01617 Surface antigen 7 365 5.0E-74 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04695 34e617bf24182bb7d479748d141ff453 365 SUPERFAMILY SSF56925 249 365 4.19E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04695 34e617bf24182bb7d479748d141ff453 365 SUPERFAMILY SSF56925 48 79 4.19E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 SUPERFAMILY SSF52540 3 301 1.14E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:1.10.150.300 132 198 7.9E-20 T 20-04-2016 IPR023192 TGS-like domain APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:3.40.50.300 199 262 7.3E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:3.40.50.300 3 131 7.3E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PANTHER PTHR23305:SF12 1 362 6.5E-177 T 20-04-2016 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PIRSF PIRSF006641 1 363 1.4E-148 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 362 7.9E-137 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.6E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.6E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.6E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.6E-34 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.8E-38 T 20-04-2016 IPR013029 Domain of unknown function DUF933 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Pfam PF01926 50S ribosome-binding GTPase 5 123 9.6E-24 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 40.002 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:3.10.20.30 263 362 1.8E-43 T 20-04-2016 IPR012675 Beta-grasp domain APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 PANTHER PTHR23305 1 362 6.5E-177 T 20-04-2016 APH_RS05195 cedde69bc95f13a78758e2724d5e91fa 363 SUPERFAMILY SSF81271 279 360 6.1E-34 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APH_RS00250 5033e1dfaf0644bd7eb1f29f19f072b0 71 Pfam PF03966 Trm112p-like protein 3 42 1.8E-7 T 20-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APH_RS00250 5033e1dfaf0644bd7eb1f29f19f072b0 71 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 26.138 T 20-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APH_RS00250 5033e1dfaf0644bd7eb1f29f19f072b0 71 Gene3D G3DSA:2.20.25.10 9 64 6.7E-25 T 20-04-2016 APH_RS00250 5033e1dfaf0644bd7eb1f29f19f072b0 71 SUPERFAMILY SSF158997 2 56 1.05E-19 T 20-04-2016 APH_RS00250 5033e1dfaf0644bd7eb1f29f19f072b0 71 PANTHER PTHR33505 2 66 3.1E-24 T 20-04-2016 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 SUPERFAMILY SSF56925 88 119 1.46E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 SUPERFAMILY SSF56925 306 422 1.46E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 SUPERFAMILY SSF56925 27 46 1.46E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 Pfam PF01617 Surface antigen 27 422 5.8E-83 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 Gene3D G3DSA:2.40.160.20 87 135 1.8E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 Gene3D G3DSA:2.40.160.20 306 422 1.8E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05210 604e656f207d06d9c4247fc262e3b6f7 422 Gene3D G3DSA:2.40.160.20 29 45 1.8E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02815 52668eea63462e4490eef6ab9e7e5b31 129 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 110 127 - T 20-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APH_RS02815 52668eea63462e4490eef6ab9e7e5b31 129 SUPERFAMILY SSF89360 18 118 1.1E-20 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS02815 52668eea63462e4490eef6ab9e7e5b31 129 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 128 2.0E-28 T 20-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APH_RS02815 52668eea63462e4490eef6ab9e7e5b31 129 Gene3D G3DSA:2.60.300.12 18 118 1.9E-24 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS02815 52668eea63462e4490eef6ab9e7e5b31 129 PANTHER PTHR10072 9 129 8.4E-34 T 20-04-2016 APH_RS02815 52668eea63462e4490eef6ab9e7e5b31 129 Pfam PF01521 Iron-sulphur cluster biosynthesis 20 125 9.3E-13 T 20-04-2016 IPR000361 FeS cluster biogenesis APH_RS00015 3318d72ebe29651f0ba2d10db95c6ead 263 Pfam PF02405 Permease MlaE 51 260 7.2E-68 T 20-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APH_RS00015 3318d72ebe29651f0ba2d10db95c6ead 263 PANTHER PTHR30188:SF4 11 260 3.8E-73 T 20-04-2016 APH_RS00015 3318d72ebe29651f0ba2d10db95c6ead 263 PANTHER PTHR30188 11 260 3.8E-73 T 20-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APH_RS01525 e15325689933570558bc549db5653f08 506 Pfam PF00361 Proton-conducting membrane transporter 137 323 1.9E-15 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APH_RS01525 e15325689933570558bc549db5653f08 506 PANTHER PTHR22773:SF80 58 312 2.8E-12 T 20-04-2016 APH_RS01525 e15325689933570558bc549db5653f08 506 PANTHER PTHR22773 58 312 2.8E-12 T 20-04-2016 APH_RS04415 ad8cb815c88340caf90c210fe879fc46 342 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 336 1.1E-82 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APH_RS04415 ad8cb815c88340caf90c210fe879fc46 342 PANTHER PTHR23264 87 309 4.1E-95 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APH_RS04415 ad8cb815c88340caf90c210fe879fc46 342 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 337 31.841 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APH_RS04415 ad8cb815c88340caf90c210fe879fc46 342 SUPERFAMILY SSF52540 87 308 1.66E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04415 ad8cb815c88340caf90c210fe879fc46 342 Gene3D G3DSA:3.40.50.300 85 334 1.0E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 Pfam PF01617 Surface antigen 44 435 5.1E-60 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 SUPERFAMILY SSF56925 313 435 6.91E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 SUPERFAMILY SSF56925 103 134 6.91E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 SUPERFAMILY SSF56925 45 61 6.91E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 Gene3D G3DSA:2.40.160.20 319 435 1.4E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 Gene3D G3DSA:2.40.160.20 102 162 1.4E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02780 0d6807f13407cf7fbf65d1a083414020 435 Gene3D G3DSA:2.40.160.20 45 60 1.4E-16 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 Gene3D G3DSA:2.40.160.20 311 343 1.9E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 Gene3D G3DSA:2.40.160.20 37 53 1.9E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 Gene3D G3DSA:2.40.160.20 95 140 1.9E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 SUPERFAMILY SSF56925 305 344 4.0E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 SUPERFAMILY SSF56925 96 127 4.0E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 SUPERFAMILY SSF56925 35 54 4.0E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00770 3437a47696d948b18712d2c2633c0868 355 Pfam PF01617 Surface antigen 35 349 1.5E-51 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00115 a02254542362422d94bd4c19f6f98e20 392 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 36 385 1.3E-65 T 20-04-2016 IPR006427 Phage portal protein, HK97 APH_RS00115 a02254542362422d94bd4c19f6f98e20 392 Pfam PF04860 Phage portal protein 45 378 4.5E-85 T 20-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 188 6.9E-68 T 20-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 PANTHER PTHR30108 7 180 2.8E-83 T 20-04-2016 APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 PANTHER PTHR30108:SF10 7 180 2.8E-83 T 20-04-2016 APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 Gene3D G3DSA:3.40.50.1950 7 191 4.5E-70 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 191 34.804 T 20-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 SUPERFAMILY SSF52507 7 184 3.4E-58 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APH_RS03085 01958cc55c9c0eb0bfd593cdf216c97d 194 Pfam PF02441 Flavoprotein 7 134 9.3E-28 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 Gene3D G3DSA:2.30.40.10 27 94 6.0E-14 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 Gene3D G3DSA:3.20.20.140 95 412 7.2E-109 T 20-04-2016 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 PANTHER PTHR11647 2 449 2.3E-156 T 20-04-2016 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 67 448 1.7E-127 T 20-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 Pfam PF01979 Amidohydrolase family 77 445 2.6E-31 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 SUPERFAMILY SSF51338 391 447 1.36E-23 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 SUPERFAMILY SSF51338 24 80 1.36E-23 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 328 339 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 ProSitePatterns PS00482 Dihydroorotase signature 1. 84 92 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 Hamap MF_00220_B Dihydroorotase [pyrC]. 22 449 40.535 T 20-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 SUPERFAMILY SSF51556 81 392 2.34E-102 T 20-04-2016 IPR032466 Metal-dependent hydrolase APH_RS01075 149e878c79e538cfd93b0ce53eb5577d 449 PANTHER PTHR11647:SF70 2 449 2.3E-156 T 20-04-2016 APH_RS02000 7640a9f1df20ecef7875f5d317121c5c 236 PANTHER PTHR30060 11 225 3.1E-44 T 20-04-2016 APH_RS02000 7640a9f1df20ecef7875f5d317121c5c 236 Pfam PF03741 Integral membrane protein TerC family 12 199 3.9E-40 T 20-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APH_RS02000 7640a9f1df20ecef7875f5d317121c5c 236 PANTHER PTHR30060:SF1 11 225 3.1E-44 T 20-04-2016 APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 Pfam PF00753 Metallo-beta-lactamase superfamily 22 162 2.0E-10 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 SUPERFAMILY SSF56281 10 420 2.1E-80 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 PANTHER PTHR11203 1 483 6.6E-157 T 20-04-2016 APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 SMART SM00849 20 194 1.4E-17 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 Gene3D G3DSA:3.60.15.10 5 254 5.7E-65 T 20-04-2016 IPR001279 Metallo-beta-lactamase APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 PANTHER PTHR11203:SF22 1 483 6.6E-157 T 20-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 APH_RS04120 637d7247a58ddca15ff9eefab1a5f177 543 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 351 407 3.7E-9 T 20-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APH_RS02390 e699c7736a383c870b5997bc04b8260c 212 PANTHER PTHR41795 8 212 1.9E-27 T 20-04-2016 APH_RS02390 e699c7736a383c870b5997bc04b8260c 212 PIRSF PIRSF033239 1 204 4.9E-68 T 20-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD APH_RS02390 e699c7736a383c870b5997bc04b8260c 212 Pfam PF06055 Exopolysaccharide synthesis, ExoD 11 188 4.0E-56 T 20-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 Pfam PF01617 Surface antigen 27 338 5.1E-51 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 Gene3D G3DSA:2.40.160.20 29 45 2.8E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 Gene3D G3DSA:2.40.160.20 87 132 2.8E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 Gene3D G3DSA:2.40.160.20 303 334 2.8E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 SUPERFAMILY SSF56925 88 119 3.45E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 SUPERFAMILY SSF56925 303 336 3.45E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04435 715e573c4c165a76c6fc31fa4e13f575 355 SUPERFAMILY SSF56925 27 46 3.45E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 Gene3D G3DSA:3.10.580.10 58 177 1.4E-13 T 20-04-2016 APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 Pfam PF00571 CBS domain 129 180 1.6E-4 T 20-04-2016 IPR000644 CBS domain APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 SUPERFAMILY SSF54631 56 186 1.11E-25 T 20-04-2016 APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 SMART SM01091 199 282 1.3E-19 T 20-04-2016 IPR005170 Transporter-associated domain APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 Pfam PF03471 Transporter associated domain 201 280 3.8E-14 T 20-04-2016 IPR005170 Transporter-associated domain APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 SUPERFAMILY SSF56176 196 279 6.27E-16 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 Gene3D G3DSA:3.30.465.10 178 279 2.6E-20 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APH_RS00105 de47b76ad25ffac18bdb17a97d640413 289 PANTHER PTHR22777 56 278 4.5E-65 T 20-04-2016 APH_RS05225 294b007fc31c60ce6281e4472ccab9be 115 SUPERFAMILY SSF88697 6 114 1.91E-34 T 20-04-2016 IPR015947 PUA-like domain APH_RS05225 294b007fc31c60ce6281e4472ccab9be 115 Gene3D G3DSA:3.10.590.10 8 112 1.3E-16 T 20-04-2016 IPR002740 EVE domain APH_RS05225 294b007fc31c60ce6281e4472ccab9be 115 PANTHER PTHR14087 6 115 5.7E-34 T 20-04-2016 APH_RS05225 294b007fc31c60ce6281e4472ccab9be 115 Pfam PF01878 EVE domain 6 112 3.8E-28 T 20-04-2016 IPR002740 EVE domain APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 27 96 17.158 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 Gene3D G3DSA:4.10.640.10 21 95 2.5E-25 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 85 95 5.5E-16 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 53 63 5.5E-16 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 71 85 5.5E-16 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 63 70 5.5E-16 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 SUPERFAMILY SSF46911 25 96 1.23E-23 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 46 95 5.0E-19 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 PANTHER PTHR13479 13 95 3.8E-22 T 20-04-2016 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 Pfam PF01084 Ribosomal protein S18 44 93 4.3E-22 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00680 e5d83f6bddce50ac80bef72ef669f75a 96 TIGRFAM TIGR00165 S18: ribosomal protein bS18 29 95 1.2E-23 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS05430 fe49389fece2715fc46e6fb7c6b4d428 184 Gene3D G3DSA:1.10.520.20 13 104 7.4E-7 T 20-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APH_RS05430 fe49389fece2715fc46e6fb7c6b4d428 184 Hamap MF_01416 ATP synthase subunit delta [atpD]. 5 179 13.127 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APH_RS05430 fe49389fece2715fc46e6fb7c6b4d428 184 PANTHER PTHR11910 13 181 1.2E-21 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APH_RS05430 fe49389fece2715fc46e6fb7c6b4d428 184 SUPERFAMILY SSF47928 12 104 3.27E-10 T 20-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APH_RS05430 fe49389fece2715fc46e6fb7c6b4d428 184 Pfam PF00213 ATP synthase delta (OSCP) subunit 12 175 8.9E-28 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 Pfam PF00691 OmpA family 51 144 1.1E-13 T 20-04-2016 IPR006665 OmpA-like domain APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 PANTHER PTHR30128 50 159 2.9E-20 T 20-04-2016 APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 Gene3D G3DSA:3.30.1330.60 48 159 5.4E-23 T 20-04-2016 IPR006665 OmpA-like domain APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 SUPERFAMILY SSF103088 48 159 4.32E-22 T 20-04-2016 IPR006665 OmpA-like domain APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 PRINTS PR01021 OMPA domain signature 82 97 7.2E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 PRINTS PR01021 OMPA domain signature 52 74 7.2E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APH_RS01470 715a8c43e4bc2923d980c1786d6db497 205 PRINTS PR01021 OMPA domain signature 97 113 7.2E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 SUPERFAMILY SSF53383 2 390 1.6E-107 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 20-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 Gene3D G3DSA:3.40.640.10 43 270 2.2E-73 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 Pfam PF00155 Aminotransferase class I and II 30 386 2.2E-70 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 Gene3D G3DSA:3.90.1150.10 271 392 3.1E-37 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 PANTHER PTHR11751 12 389 7.3E-151 T 20-04-2016 APH_RS02765 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 PANTHER PTHR11751:SF306 12 389 7.3E-151 T 20-04-2016 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 SUPERFAMILY SSF52096 10 192 1.8E-71 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.578 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 20-04-2016 IPR018215 ClpP, Ser active site APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 Gene3D G3DSA:3.90.226.10 3 192 1.1E-86 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 9.0E-99 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PANTHER PTHR10381 1 196 2.2E-137 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 Pfam PF00574 Clp protease 13 192 3.3E-85 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 20-04-2016 IPR033135 ClpP, histidine active site APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.1E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.1E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.1E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.1E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.1E-48 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_RS03830 ef930fb5aec45da9e2d8636352e6b9eb 197 PANTHER PTHR10381:SF11 1 196 2.2E-137 T 20-04-2016 APH_RS01225 c15bc64d0f275b324a05c8a928e7d569 208 SUPERFAMILY SSF52166 1 205 2.62E-69 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APH_RS01225 c15bc64d0f275b324a05c8a928e7d569 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 3.6E-70 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APH_RS01225 c15bc64d0f275b324a05c8a928e7d569 208 PANTHER PTHR10746 1 205 1.3E-82 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APH_RS01225 c15bc64d0f275b324a05c8a928e7d569 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.736 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APH_RS01225 c15bc64d0f275b324a05c8a928e7d569 208 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.7E-61 T 20-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APH_RS01225 c15bc64d0f275b324a05c8a928e7d569 208 Gene3D G3DSA:3.40.1370.10 57 205 1.2E-51 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APH_RS02245 e4d3dce136587f7eb0a8a311ecba1e67 122 PANTHER PTHR11058:SF10 1 122 3.9E-37 T 20-04-2016 APH_RS02245 e4d3dce136587f7eb0a8a311ecba1e67 122 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 16.785 T 20-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 APH_RS02245 e4d3dce136587f7eb0a8a311ecba1e67 122 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 121 3.0E-31 T 20-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APH_RS02245 e4d3dce136587f7eb0a8a311ecba1e67 122 PANTHER PTHR11058 1 122 3.9E-37 T 20-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APH_RS00725 206fb7700cf8ca05042f84647d1a8ed7 287 Pfam PF02511 Thymidylate synthase complementing protein 33 231 2.4E-55 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APH_RS00725 206fb7700cf8ca05042f84647d1a8ed7 287 PANTHER PTHR34934 25 281 1.4E-53 T 20-04-2016 APH_RS00725 206fb7700cf8ca05042f84647d1a8ed7 287 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 31 237 4.6E-62 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APH_RS00725 206fb7700cf8ca05042f84647d1a8ed7 287 SUPERFAMILY SSF69796 22 244 7.72E-67 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APH_RS00725 206fb7700cf8ca05042f84647d1a8ed7 287 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 27 245 28.28 T 20-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 APH_RS05665 84f3921571083570894b2c3ea3a2503c 268 SUPERFAMILY SSF56925 139 266 4.71E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05665 84f3921571083570894b2c3ea3a2503c 268 Gene3D G3DSA:2.40.160.20 163 263 2.8E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05665 84f3921571083570894b2c3ea3a2503c 268 Pfam PF01617 Surface antigen 154 266 8.0E-38 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 PIRSF PIRSF000728 34 321 4.5E-79 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 PANTHER PTHR23342 28 320 3.7E-70 T 20-04-2016 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 Hamap MF_00082_B Acetylglutamate kinase [argB]. 47 322 25.914 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 TIGRFAM TIGR00761 argB: acetylglutamate kinase 50 297 5.2E-51 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 Gene3D G3DSA:3.40.1160.10 48 321 2.8E-73 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 SUPERFAMILY SSF53633 28 322 1.54E-64 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS01865 7bfb3735576adcb47857a8cdcd15f243 327 Pfam PF00696 Amino acid kinase family 50 243 4.8E-22 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 PANTHER PTHR12001 15 327 9.3E-92 T 20-04-2016 IPR017446 Polyprenyl synthetase-related APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 209 221 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 Gene3D G3DSA:1.10.600.10 9 326 4.3E-87 T 20-04-2016 IPR008949 Isoprenoid synthase domain APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 101 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 PANTHER PTHR12001:SF47 15 327 9.3E-92 T 20-04-2016 APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 Pfam PF00348 Polyprenyl synthetase 36 267 4.1E-63 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APH_RS05045 124e77b7ee036b6b3e2ab15c7ca49dde 327 SUPERFAMILY SSF48576 8 326 1.15E-83 T 20-04-2016 IPR008949 Isoprenoid synthase domain APH_RS05165 19cc5eefc94f20662b373d3ca82130c8 235 PANTHER PTHR32125 5 231 2.4E-28 T 20-04-2016 APH_RS05165 19cc5eefc94f20662b373d3ca82130c8 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 231 4.2E-42 T 20-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APH_RS05165 19cc5eefc94f20662b373d3ca82130c8 235 Gene3D G3DSA:3.90.550.10 5 232 2.1E-46 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APH_RS05165 19cc5eefc94f20662b373d3ca82130c8 235 PANTHER PTHR32125:SF4 5 231 2.4E-28 T 20-04-2016 APH_RS05165 19cc5eefc94f20662b373d3ca82130c8 235 SUPERFAMILY SSF53448 5 231 2.93E-43 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APH_RS05690 943e83d9b7e833dfc90a0857ba64d313 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 1.5E-11 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05690 943e83d9b7e833dfc90a0857ba64d313 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 1.5E-11 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05690 943e83d9b7e833dfc90a0857ba64d313 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 1.5E-11 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05690 943e83d9b7e833dfc90a0857ba64d313 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 1.5E-11 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05690 943e83d9b7e833dfc90a0857ba64d313 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.5E-11 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS05690 943e83d9b7e833dfc90a0857ba64d313 221 Pfam PF03379 CcmB protein 6 208 1.1E-15 T 20-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS01165 0c6fa27418038f173c2f5aa236a1ca75 149 Gene3D G3DSA:3.40.50.970 8 144 3.0E-59 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS01165 0c6fa27418038f173c2f5aa236a1ca75 149 PANTHER PTHR11624:SF1 10 144 3.4E-82 T 20-04-2016 APH_RS01165 0c6fa27418038f173c2f5aa236a1ca75 149 PANTHER PTHR11624 10 144 3.4E-82 T 20-04-2016 IPR033247 Transketolase family APH_RS01165 0c6fa27418038f173c2f5aa236a1ca75 149 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 144 4.6E-61 T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APH_RS01165 0c6fa27418038f173c2f5aa236a1ca75 149 SUPERFAMILY SSF52518 5 144 1.06E-54 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 Pfam PF01743 Poly A polymerase head domain 26 146 2.1E-28 T 20-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 180 234 8.9E-8 T 20-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 SUPERFAMILY SSF81891 146 402 2.88E-41 T 20-04-2016 APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 Gene3D G3DSA:3.30.460.10 10 143 4.2E-41 T 20-04-2016 APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 PANTHER PTHR13734 6 235 6.7E-59 T 20-04-2016 APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 SUPERFAMILY SSF81301 10 144 2.4E-38 T 20-04-2016 APH_RS04895 4880cba1a5da68e0c7cf4a3416f4df0d 409 Gene3D G3DSA:1.10.3090.10 146 367 1.1E-33 T 20-04-2016 APH_RS04205 08752c7ace4946a70ba50f5f26e70631 270 PANTHER PTHR20852:SF35 82 266 3.1E-34 T 20-04-2016 APH_RS04205 08752c7ace4946a70ba50f5f26e70631 270 Pfam PF00120 Glutamine synthetase, catalytic domain 53 260 1.6E-39 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS04205 08752c7ace4946a70ba50f5f26e70631 270 SUPERFAMILY SSF55931 1 262 1.03E-51 T 20-04-2016 APH_RS04205 08752c7ace4946a70ba50f5f26e70631 270 SMART SM01230 1 225 9.1E-15 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_RS04205 08752c7ace4946a70ba50f5f26e70631 270 PANTHER PTHR20852 82 266 3.1E-34 T 20-04-2016 APH_RS04205 08752c7ace4946a70ba50f5f26e70631 270 Gene3D G3DSA:3.30.590.10 55 260 6.1E-42 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 Gene3D G3DSA:3.40.50.300 53 159 3.3E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 Gene3D G3DSA:3.30.63.10 3 52 1.1E-22 T 20-04-2016 APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 SUPERFAMILY SSF52540 3 156 4.93E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 SMART SM00072 1 153 4.5E-25 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 PANTHER PTHR23117:SF13 3 174 2.1E-55 T 20-04-2016 APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 1 150 1.1E-51 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 PANTHER PTHR23117 3 174 2.1E-55 T 20-04-2016 APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 ProSitePatterns PS00856 Guanylate kinase-like signature. 5 22 - T 20-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APH_RS00660 8c13c946ab808c336b3f2664474376aa 174 Pfam PF00625 Guanylate kinase 3 151 2.9E-34 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 Gene3D G3DSA:1.10.1900.20 55 116 1.5E-24 T 20-04-2016 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.1E-34 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.1E-34 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.1E-34 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.238 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 69 3.0E-8 T 20-04-2016 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 SUPERFAMILY SSF74731 3 115 9.16E-45 T 20-04-2016 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 112 1.9E-43 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 Pfam PF00453 Ribosomal protein L20 3 109 7.4E-45 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS00285 975c6b7042e5cdc17899b2216bf3239c 128 PANTHER PTHR10986 2 116 6.3E-52 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 Gene3D G3DSA:2.40.160.20 247 365 5.0E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 Gene3D G3DSA:2.40.160.20 88 126 5.0E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 Gene3D G3DSA:2.40.160.20 29 47 5.0E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 Pfam PF01617 Surface antigen 29 365 3.3E-36 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 SUPERFAMILY SSF56925 28 48 3.66E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 SUPERFAMILY SSF56925 241 365 3.66E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05540 106e506ff3cca9f268dd72bcfce7e7a8 365 SUPERFAMILY SSF56925 89 120 3.66E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00570 037bdcd564180213984027702139006e 206 PANTHER PTHR24220:SF508 3 184 7.2E-49 T 20-04-2016 APH_RS00570 037bdcd564180213984027702139006e 206 SUPERFAMILY SSF52540 2 193 2.77E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00570 037bdcd564180213984027702139006e 206 Pfam PF00005 ABC transporter 18 155 4.6E-20 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_RS00570 037bdcd564180213984027702139006e 206 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_RS00570 037bdcd564180213984027702139006e 206 PANTHER PTHR24220 3 184 7.2E-49 T 20-04-2016 APH_RS00570 037bdcd564180213984027702139006e 206 Gene3D G3DSA:3.40.50.300 1 190 4.6E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00570 037bdcd564180213984027702139006e 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 195 6.5E-50 T 20-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 APH_RS03235 a28fe052825965594204121074fc9f44 164 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 12 146 27.749 T 20-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APH_RS03235 a28fe052825965594204121074fc9f44 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_RS03235 a28fe052825965594204121074fc9f44 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_RS03235 a28fe052825965594204121074fc9f44 164 PANTHER PTHR10849:SF20 19 163 5.1E-100 T 20-04-2016 APH_RS03235 a28fe052825965594204121074fc9f44 164 PANTHER PTHR10849 19 163 5.1E-100 T 20-04-2016 APH_RS03235 a28fe052825965594204121074fc9f44 164 Pfam PF12838 4Fe-4S dicluster domain 64 118 5.2E-13 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APH_RS03235 a28fe052825965594204121074fc9f44 164 SUPERFAMILY SSF54862 38 146 1.26E-27 T 20-04-2016 APH_RS03235 a28fe052825965594204121074fc9f44 164 Gene3D G3DSA:1.10.1060.10 21 141 5.1E-23 T 20-04-2016 APH_RS03235 a28fe052825965594204121074fc9f44 164 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 21 142 2.6E-51 T 20-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APH_RS00385 9fb993e0907aa04cc2cc047166bd7f7f 271 Pfam PF03524 Conjugal transfer protein 32 256 6.8E-61 T 20-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APH_RS00385 9fb993e0907aa04cc2cc047166bd7f7f 271 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 5 257 5.7E-66 T 20-04-2016 IPR014148 P-type conjugative transfer protein VirB9 APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 PRINTS PR01853 Bacterial YajC preprotein translocase signature 46 64 1.1E-14 T 20-04-2016 IPR003849 Preprotein translocase YajC APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 1.1E-14 T 20-04-2016 IPR003849 Preprotein translocase YajC APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 PANTHER PTHR33909 4 111 2.2E-29 T 20-04-2016 APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 SMART SM01323 24 109 8.3E-42 T 20-04-2016 IPR003849 Preprotein translocase YajC APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 PANTHER PTHR33909:SF1 4 111 2.2E-29 T 20-04-2016 APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 28 109 8.3E-29 T 20-04-2016 IPR003849 Preprotein translocase YajC APH_RS04335 0610ee8ae66c8ff0ae654100e8d1c359 124 Pfam PF02699 Preprotein translocase subunit 29 106 2.6E-29 T 20-04-2016 IPR003849 Preprotein translocase YajC APH_RS03485 b589301f18884c81ca18c805e13222d4 439 Gene3D G3DSA:1.20.1250.20 46 210 5.0E-4 T 20-04-2016 APH_RS03485 b589301f18884c81ca18c805e13222d4 439 SUPERFAMILY SSF103473 39 437 7.85E-20 T 20-04-2016 IPR020846 Major facilitator superfamily domain APH_RS05005 22bcdede5fd9e7190c3e2089267eaef9 282 Pfam PF01617 Surface antigen 43 281 6.9E-80 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05005 22bcdede5fd9e7190c3e2089267eaef9 282 SUPERFAMILY SSF56925 104 135 5.76E-21 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05005 22bcdede5fd9e7190c3e2089267eaef9 282 SUPERFAMILY SSF56925 166 281 5.76E-21 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05005 22bcdede5fd9e7190c3e2089267eaef9 282 SUPERFAMILY SSF56925 45 63 5.76E-21 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05005 22bcdede5fd9e7190c3e2089267eaef9 282 Gene3D G3DSA:2.40.160.20 44 281 1.4E-32 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05060 b62a252d9cc5b7d5c51bfc965926f3f6 338 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 327 1.2E-28 T 20-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APH_RS05060 b62a252d9cc5b7d5c51bfc965926f3f6 338 Pfam PF06144 DNA polymerase III, delta subunit 22 184 8.2E-10 T 20-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APH_RS05060 b62a252d9cc5b7d5c51bfc965926f3f6 338 SUPERFAMILY SSF52540 18 202 1.27E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS05060 b62a252d9cc5b7d5c51bfc965926f3f6 338 Gene3D G3DSA:1.10.8.60 140 208 5.0E-5 T 20-04-2016 APH_RS05060 b62a252d9cc5b7d5c51bfc965926f3f6 338 SUPERFAMILY SSF48019 216 326 7.14E-7 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 SUPERFAMILY SSF55120 2 215 1.27E-68 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 211 2.3E-64 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 26 172 3.3E-48 T 20-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 PANTHER PTHR13767:SF2 3 298 6.3E-95 T 20-04-2016 APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 173 227 3.1E-13 T 20-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 PANTHER PTHR13767 3 298 6.3E-95 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS03140 3b5e3f41079ffe785d762dc4c7771d05 300 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 298 17.032 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 Pfam PF03023 MviN-like protein 26 466 1.4E-87 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PANTHER PTHR11206 213 437 5.3E-31 T 20-04-2016 APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PANTHER PTHR11206 494 502 5.3E-31 T 20-04-2016 APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PANTHER PTHR11206 65 78 5.3E-31 T 20-04-2016 APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PIRSF PIRSF002869 1 500 1.1E-123 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 129 153 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 402 419 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 31 50 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 350 369 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 153 174 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 252 278 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 50 66 5.3E-53 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 491 1.5E-91 T 20-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PANTHER PTHR11206:SF90 213 437 5.3E-31 T 20-04-2016 APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PANTHER PTHR11206:SF90 494 502 5.3E-31 T 20-04-2016 APH_RS05600 38815fcbdcdf5ff0cae89150b9585e7b 502 PANTHER PTHR11206:SF90 65 78 5.3E-31 T 20-04-2016 APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 SMART SM00490 428 523 4.7E-9 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 PANTHER PTHR30580 2 658 1.3E-178 T 20-04-2016 APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 Pfam PF00270 DEAD/DEAH box helicase 134 299 4.9E-15 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 Gene3D G3DSA:3.40.50.300 128 315 1.1E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 Pfam PF00271 Helicase conserved C-terminal domain 440 522 9.4E-9 T 20-04-2016 IPR001650 Helicase, C-terminal APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 SMART SM00487 126 326 5.5E-23 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 SUPERFAMILY SSF52540 147 375 2.35E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 SUPERFAMILY SSF52540 439 533 2.35E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 TIGRFAM TIGR00595 priA: primosomal protein N' 153 655 7.4E-171 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 657 21.856 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 Gene3D G3DSA:3.40.50.300 342 363 8.7E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01570 0b3c8bcf2bfabe9bd93b285cc994e908 658 Gene3D G3DSA:3.40.50.300 425 566 8.7E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 PANTHER PTHR12029 4 252 2.1E-56 T 20-04-2016 APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 SMART SM00967 11 87 1.8E-12 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 12 251 1.3E-62 T 20-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 Pfam PF00588 SpoU rRNA Methylase family 109 249 1.7E-38 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 Gene3D G3DSA:3.40.1280.10 107 252 1.9E-46 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 SUPERFAMILY SSF75217 92 252 4.13E-44 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 Gene3D G3DSA:3.30.1330.30 10 81 5.3E-12 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 SUPERFAMILY SSF55315 6 83 4.36E-13 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APH_RS01195 715f55d3ce2a18f378971eb2cde3f22e 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 82 4.1E-13 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APH_RS03605 08c374c92e36b3e6d7cebfc589acbb92 172 PANTHER PTHR11237 2 171 5.7E-64 T 20-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 APH_RS03605 08c374c92e36b3e6d7cebfc589acbb92 172 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 6 170 1.1E-57 T 20-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 APH_RS03605 08c374c92e36b3e6d7cebfc589acbb92 172 SUPERFAMILY SSF47240 7 139 1.58E-12 T 20-04-2016 IPR009078 Ferritin-like superfamily APH_RS03605 08c374c92e36b3e6d7cebfc589acbb92 172 PANTHER PTHR11237:SF4 2 171 5.7E-64 T 20-04-2016 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 Pfam PF14622 Ribonuclease-III-like 15 139 3.6E-30 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 SUPERFAMILY SSF54768 109 220 7.07E-26 T 20-04-2016 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 Gene3D G3DSA:3.30.160.20 153 218 7.7E-22 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 SMART SM00535 17 148 8.8E-43 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 5 216 27.0 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 SMART SM00358 154 220 3.9E-18 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 SUPERFAMILY SSF69065 3 156 6.1E-45 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 Gene3D G3DSA:1.10.1520.10 3 145 3.7E-42 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 Pfam PF00035 Double-stranded RNA binding motif 154 218 1.2E-11 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 PANTHER PTHR11207 10 218 6.5E-67 T 20-04-2016 APH_RS04595 312505fdfabbb6eb89b11f7fadffa41c 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 218 6.2E-70 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APH_RS00930 1e7994921cff9194fcddc0381449cd1e 176 PANTHER PTHR20941 5 159 2.3E-43 T 20-04-2016 APH_RS00930 1e7994921cff9194fcddc0381449cd1e 176 Gene3D G3DSA:3.30.70.560 13 161 3.5E-42 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS00930 1e7994921cff9194fcddc0381449cd1e 176 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 14 144 2.0E-30 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS00930 1e7994921cff9194fcddc0381449cd1e 176 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 15 144 4.5E-32 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS00930 1e7994921cff9194fcddc0381449cd1e 176 SUPERFAMILY SSF55083 13 161 1.96E-41 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APH_RS04905 6340bb13dd681fff6876088b2d520bcd 183 PANTHER PTHR10245 1 183 3.4E-23 T 20-04-2016 APH_RS04905 6340bb13dd681fff6876088b2d520bcd 183 PANTHER PTHR10245:SF38 1 183 3.4E-23 T 20-04-2016 APH_RS04905 6340bb13dd681fff6876088b2d520bcd 183 SMART SM00530 33 88 5.5E-13 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APH_RS04905 6340bb13dd681fff6876088b2d520bcd 183 Pfam PF01381 Helix-turn-helix 34 88 4.8E-13 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APH_RS04905 6340bb13dd681fff6876088b2d520bcd 183 SUPERFAMILY SSF47413 21 105 4.61E-26 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APH_RS04905 6340bb13dd681fff6876088b2d520bcd 183 Gene3D G3DSA:1.10.260.40 30 91 3.0E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APH_RS01995 eeea4865200d36866eebda2d8d8c4dad 75 SUPERFAMILY SSF50447 8 53 2.83E-8 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APH_RS01995 eeea4865200d36866eebda2d8d8c4dad 75 Gene3D G3DSA:2.40.30.10 8 53 5.4E-11 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 492 512 6.3E-32 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 383 6.3E-32 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 110 6.3E-32 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 477 492 6.3E-32 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 129 149 6.3E-32 T 20-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 Gene3D G3DSA:2.40.50.100 121 151 3.1E-11 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 Gene3D G3DSA:2.40.50.100 347 381 3.1E-11 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 81 513 3.0E-114 T 20-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PANTHER PTHR30386:SF3 209 400 1.2E-95 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PANTHER PTHR30386:SF3 416 513 1.2E-95 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PANTHER PTHR30386:SF3 79 172 1.2E-95 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PANTHER PTHR30386 209 400 1.2E-95 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PANTHER PTHR30386 416 513 1.2E-95 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 PANTHER PTHR30386 79 172 1.2E-95 T 20-04-2016 APH_RS04145 0cfc1261e5de365a2369ed7e46e1d4ce 513 Pfam PF13437 HlyD family secretion protein 349 424 3.2E-7 T 20-04-2016 APH_RS02590 158a5ee2e49301deabeb27aab1b0bb38 108 Pfam PF05258 Protein of unknown function (DUF721) 13 106 2.4E-16 T 20-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 APH_RS00445 4290328aa84c57ab87b1b07255e66579 391 SUPERFAMILY SSF103473 2 387 3.4E-39 T 20-04-2016 IPR020846 Major facilitator superfamily domain APH_RS00445 4290328aa84c57ab87b1b07255e66579 391 Pfam PF07690 Major Facilitator Superfamily 5 329 2.0E-28 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APH_RS00445 4290328aa84c57ab87b1b07255e66579 391 Gene3D G3DSA:1.20.1250.20 3 171 8.1E-17 T 20-04-2016 APH_RS00445 4290328aa84c57ab87b1b07255e66579 391 Gene3D G3DSA:1.20.1250.20 191 390 6.0E-5 T 20-04-2016 APH_RS00445 4290328aa84c57ab87b1b07255e66579 391 PANTHER PTHR23512:SF1 1 378 4.2E-28 T 20-04-2016 APH_RS00445 4290328aa84c57ab87b1b07255e66579 391 PANTHER PTHR23512 1 378 4.2E-28 T 20-04-2016 APH_RS05480 9b00b24ffe99a874c42af40c59ddc34f 102 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 9.2E-14 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APH_RS05480 9b00b24ffe99a874c42af40c59ddc34f 102 Gene3D G3DSA:3.30.1310.10 13 98 5.4E-12 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APH_RS05480 9b00b24ffe99a874c42af40c59ddc34f 102 SUPERFAMILY SSF82607 7 99 5.49E-13 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 Pfam PF13667 ThiC-associated domain 9 77 3.5E-19 T 20-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 PANTHER PTHR30557:SF1 105 135 7.7E-32 T 20-04-2016 APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 PANTHER PTHR30557:SF1 156 166 7.7E-32 T 20-04-2016 APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 PANTHER PTHR30557:SF1 5 76 7.7E-32 T 20-04-2016 APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 PANTHER PTHR30557 105 135 7.7E-32 T 20-04-2016 APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 PANTHER PTHR30557 156 166 7.7E-32 T 20-04-2016 APH_RS02490 8126a200feb99f8770c743883b1c5bd6 168 PANTHER PTHR30557 5 76 7.7E-32 T 20-04-2016 APH_RS00885 a930f3704174351b05aa14c2754ee45e 206 Pfam PF10090 Histidine phosphotransferase 24 201 1.2E-33 T 20-04-2016 IPR018762 Histidine phosphotransferase APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 Gene3D G3DSA:3.90.1150.10 138 237 5.0E-13 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 101 110 - T 20-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 PANTHER PTHR13693 1 240 4.2E-70 T 20-04-2016 APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 SUPERFAMILY SSF53383 2 239 9.47E-56 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 Pfam PF00155 Aminotransferase class I and II 2 236 2.2E-29 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 PANTHER PTHR13693:SF53 1 240 4.2E-70 T 20-04-2016 APH_RS03870 6abf423b4c5a48319a77a6026168e406 251 Gene3D G3DSA:3.40.640.10 2 137 9.6E-49 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APH_RS05695 0e38f892ccf6b22224d2e2c380954e18 127 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 77 112 4.1E-11 T 20-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APH_RS05695 0e38f892ccf6b22224d2e2c380954e18 127 SUPERFAMILY SSF109635 1 77 5.23E-19 T 20-04-2016 APH_RS05695 0e38f892ccf6b22224d2e2c380954e18 127 PANTHER PTHR33823:SF2 1 127 2.1E-26 T 20-04-2016 APH_RS05695 0e38f892ccf6b22224d2e2c380954e18 127 PANTHER PTHR33823 1 127 2.1E-26 T 20-04-2016 APH_RS05695 0e38f892ccf6b22224d2e2c380954e18 127 SUPERFAMILY SSF57716 79 117 6.13E-9 T 20-04-2016 APH_RS04910 0803c04b280dd72be3957794219a4be4 306 SUPERFAMILY SSF56925 177 263 1.23E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04910 0803c04b280dd72be3957794219a4be4 306 SUPERFAMILY SSF56925 105 136 1.23E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04910 0803c04b280dd72be3957794219a4be4 306 Pfam PF01617 Surface antigen 39 305 5.1E-33 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04910 0803c04b280dd72be3957794219a4be4 306 Gene3D G3DSA:2.40.160.20 85 136 6.5E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04910 0803c04b280dd72be3957794219a4be4 306 Gene3D G3DSA:2.40.160.20 177 264 6.5E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04610 0ab83008a618032b5a76e6fcfd3610a2 275 SUPERFAMILY SSF56925 181 261 1.26E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04610 0ab83008a618032b5a76e6fcfd3610a2 275 Pfam PF01617 Surface antigen 154 270 7.8E-41 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04610 0ab83008a618032b5a76e6fcfd3610a2 275 Gene3D G3DSA:2.40.160.20 181 256 4.5E-12 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 Pfam PF01617 Surface antigen 39 360 8.3E-51 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 Gene3D G3DSA:2.40.160.20 324 355 2.3E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 Gene3D G3DSA:2.40.160.20 41 57 2.3E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 Gene3D G3DSA:2.40.160.20 99 144 2.3E-11 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 SUPERFAMILY SSF56925 100 131 1.79E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 SUPERFAMILY SSF56925 324 356 1.79E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS00765 2857ec50a78ca4656bb00daaf1a5da9e 367 SUPERFAMILY SSF56925 39 58 1.79E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 SMART SM00729 145 361 4.0E-56 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 439 7.9E-147 T 20-04-2016 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 PANTHER PTHR11918:SF43 1 440 2.9E-160 T 20-04-2016 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 Gene3D G3DSA:3.80.30.20 144 377 4.6E-77 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 Pfam PF04055 Radical SAM superfamily 149 322 1.3E-33 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 Pfam PF00919 Uncharacterized protein family UPF0004 6 101 4.4E-28 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 PANTHER PTHR11918 1 440 2.9E-160 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 70.102 T 20-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 SUPERFAMILY SSF102114 134 371 4.71E-60 T 20-04-2016 APH_RS03500 119e6ac6c6ef8d6877548afffa094356 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 437 8.0E-144 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APH_RS02665 f47bc432a0982a1675dc2cbeb60f5e95 129 Pfam PF06199 Phage tail tube protein 34 124 3.0E-6 T 20-04-2016 IPR011855 Phage major tail protein TP901-1 APH_RS03135 340e8e673c77579d44c13193b984b185 93 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 90 19.402 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APH_RS03135 340e8e673c77579d44c13193b984b185 93 SUPERFAMILY SSF47060 3 90 4.71E-28 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APH_RS03135 340e8e673c77579d44c13193b984b185 93 PANTHER PTHR23321 1 92 5.8E-29 T 20-04-2016 APH_RS03135 340e8e673c77579d44c13193b984b185 93 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.3E-30 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APH_RS03135 340e8e673c77579d44c13193b984b185 93 Pfam PF00312 Ribosomal protein S15 8 89 2.8E-28 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS03135 340e8e673c77579d44c13193b984b185 93 Gene3D G3DSA:1.10.287.10 3 90 8.3E-30 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APH_RS03135 340e8e673c77579d44c13193b984b185 93 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 89 8.0E-36 T 20-04-2016 APH_RS03135 340e8e673c77579d44c13193b984b185 93 SMART SM01387 8 89 1.6E-35 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04775 836f5429b846dded2a7eafb63b8b6a45 167 Pfam PF02326 Plant ATP synthase F0 5 45 7.7E-7 T 20-04-2016 IPR003319 ATP synthase YMF19-like, N-terminal APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 Gene3D G3DSA:2.40.160.20 308 377 4.5E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 Gene3D G3DSA:2.40.160.20 87 132 4.5E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 Gene3D G3DSA:2.40.160.20 29 45 4.5E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 Pfam PF01617 Surface antigen 27 387 6.1E-72 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 SUPERFAMILY SSF56925 88 119 1.07E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 SUPERFAMILY SSF56925 308 381 1.07E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04800 61cf8ef293b3b52bd608e84b4fcb504e 391 SUPERFAMILY SSF56925 27 46 1.07E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS03115 cdff3306185aaf227f98642fc0e342a1 473 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 332 451 2.2E-16 T 20-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit APH_RS03115 cdff3306185aaf227f98642fc0e342a1 473 Pfam PF03237 Terminase-like family 54 451 2.6E-20 T 20-04-2016 IPR004921 Terminase, large subunit APH_RS00175 0e528342019e403a6b438890ce42cb09 541 SUPERFAMILY SSF52540 8 275 6.76E-113 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00175 0e528342019e403a6b438890ce42cb09 541 Pfam PF00117 Glutamine amidotransferase class-I 307 528 3.4E-51 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APH_RS00175 0e528342019e403a6b438890ce42cb09 541 PANTHER PTHR11550 1 528 6.4E-276 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APH_RS00175 0e528342019e403a6b438890ce42cb09 541 Gene3D G3DSA:3.40.50.300 7 288 6.8E-122 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS00175 0e528342019e403a6b438890ce42cb09 541 TIGRFAM TIGR00337 PyrG: CTP synthase 8 529 6.3E-215 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APH_RS00175 0e528342019e403a6b438890ce42cb09 541 Hamap MF_01227 CTP synthase [pyrG]. 8 535 46.163 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APH_RS00175 0e528342019e403a6b438890ce42cb09 541 SUPERFAMILY SSF52317 294 535 5.35E-72 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS00175 0e528342019e403a6b438890ce42cb09 541 PANTHER PTHR11550:SF0 1 528 6.4E-276 T 20-04-2016 APH_RS00175 0e528342019e403a6b438890ce42cb09 541 Gene3D G3DSA:3.40.50.880 293 534 1.9E-84 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS00175 0e528342019e403a6b438890ce42cb09 541 Pfam PF06418 CTP synthase N-terminus 9 270 8.0E-115 T 20-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APH_RS00825 e5ab9489aa54360ed70feffae4f4fd2b 207 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 174 2.5E-10 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APH_RS00825 e5ab9489aa54360ed70feffae4f4fd2b 207 Gene3D G3DSA:3.40.50.1000 62 184 1.4E-27 T 20-04-2016 IPR023214 HAD-like domain APH_RS00825 e5ab9489aa54360ed70feffae4f4fd2b 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 176 5.1E-28 T 20-04-2016 IPR023214 HAD-like domain APH_RS00825 e5ab9489aa54360ed70feffae4f4fd2b 207 SUPERFAMILY SSF56784 4 182 9.41E-32 T 20-04-2016 IPR023214 HAD-like domain APH_RS00825 e5ab9489aa54360ed70feffae4f4fd2b 207 PANTHER PTHR18901 6 185 4.5E-25 T 20-04-2016 APH_RS02075 bee894a63b9d0b99ef04b9d70d0eb1fc 189 SUPERFAMILY SSF56219 11 188 1.07E-48 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APH_RS02075 bee894a63b9d0b99ef04b9d70d0eb1fc 189 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 27 180 1.0E-10 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APH_RS02075 bee894a63b9d0b99ef04b9d70d0eb1fc 189 PANTHER PTHR22748 9 189 1.8E-53 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APH_RS02075 bee894a63b9d0b99ef04b9d70d0eb1fc 189 PANTHER PTHR22748:SF7 9 189 1.8E-53 T 20-04-2016 APH_RS02075 bee894a63b9d0b99ef04b9d70d0eb1fc 189 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 28 186 5.5E-47 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APH_RS02075 bee894a63b9d0b99ef04b9d70d0eb1fc 189 Gene3D G3DSA:3.60.10.10 11 188 4.3E-50 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 SMART SM01400 1 127 9.7E-38 T 20-04-2016 APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 127 1.1E-32 T 20-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 SUPERFAMILY SSF53271 68 291 1.07E-38 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 PANTHER PTHR10210:SF41 1 311 1.1E-88 T 20-04-2016 APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 PANTHER PTHR10210 1 311 1.1E-88 T 20-04-2016 APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 218 311 8.9E-16 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 Gene3D G3DSA:3.40.50.2020 1 166 2.5E-45 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 314 8.6E-77 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APH_RS04420 a33a042070a7c8e3b32599f1ea892912 322 Gene3D G3DSA:3.40.50.2020 167 301 1.5E-38 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APH_RS01565 423351b64e4c4b8ff3de3ed9956c99d2 327 Gene3D G3DSA:3.40.50.880 90 297 3.6E-9 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS01565 423351b64e4c4b8ff3de3ed9956c99d2 327 Pfam PF07722 Peptidase C26 159 294 1.0E-7 T 20-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 APH_RS01565 423351b64e4c4b8ff3de3ed9956c99d2 327 SUPERFAMILY SSF52317 98 296 4.58E-12 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APH_RS05845 4d0a0a03c8b2ebdfe15ed220f609c8e0 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.0E-6 T 20-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APH_RS05845 4d0a0a03c8b2ebdfe15ed220f609c8e0 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.0E-6 T 20-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APH_RS05845 4d0a0a03c8b2ebdfe15ed220f609c8e0 146 Pfam PF02416 mttA/Hcf106 family 4 41 6.3E-5 T 20-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APH_RS00330 c0729d0cfa2284c1ddb28b8c91a6b701 261 Gene3D G3DSA:3.20.20.70 2 259 2.3E-50 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_RS00330 c0729d0cfa2284c1ddb28b8c91a6b701 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 5.8E-95 T 20-04-2016 APH_RS00330 c0729d0cfa2284c1ddb28b8c91a6b701 261 PANTHER PTHR34266 2 260 1.8E-120 T 20-04-2016 APH_RS00330 c0729d0cfa2284c1ddb28b8c91a6b701 261 SUPERFAMILY SSF110399 2 241 1.44E-76 T 20-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APH_RS01020 fbdfa4c421162cfa71a0bad6b818a109 247 PANTHER PTHR33711 102 198 1.9E-14 T 20-04-2016 APH_RS01020 fbdfa4c421162cfa71a0bad6b818a109 247 Gene3D G3DSA:2.60.130.10 50 246 3.2E-31 T 20-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APH_RS01020 fbdfa4c421162cfa71a0bad6b818a109 247 Pfam PF00775 Dioxygenase 100 172 4.2E-11 T 20-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 APH_RS01020 fbdfa4c421162cfa71a0bad6b818a109 247 SUPERFAMILY SSF49482 50 246 1.09E-35 T 20-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 22.314 T 20-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 Gene3D G3DSA:3.90.470.20 1 120 6.0E-36 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 1.6E-25 T 20-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 120 4.0E-25 T 20-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 4.7E-23 T 20-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 SUPERFAMILY SSF56214 1 120 1.83E-30 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS02700 44a0b384ef19cf021c2ba0518655cd7c 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 118 6.7E-22 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APH_RS00295 46e98156fe51b96a17fb43f4b53a6c22 198 Pfam PF06242 Protein of unknown function (DUF1013) 39 177 2.3E-58 T 20-04-2016 IPR010421 Protein of unknown function DUF1013 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Gene3D G3DSA:1.25.40.20 527 629 2.5E-16 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Gene3D G3DSA:1.25.40.20 462 483 2.5E-16 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Pfam PF13606 Ankyrin repeat 531 560 0.0017 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SUPERFAMILY SSF48403 519 629 7.79E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SUPERFAMILY SSF48403 349 486 7.79E-34 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SUPERFAMILY SSF48403 106 196 7.46E-5 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 185 224 1500.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 146 175 5.2 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 349 379 5.5 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 530 560 6.1E-4 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 383 412 0.0011 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 450 483 2.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 416 446 2600.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 574 604 67.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 SMART SM00248 607 637 740.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Pfam PF12796 Ankyrin repeats (3 copies) 344 413 1.2E-9 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 PANTHER PTHR24198 531 629 5.8E-39 T 20-04-2016 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 PANTHER PTHR24198 144 175 5.8E-39 T 20-04-2016 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 PANTHER PTHR24198 346 488 5.8E-39 T 20-04-2016 APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Gene3D G3DSA:1.25.40.20 109 264 1.7E-5 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Gene3D G3DSA:1.25.40.20 265 273 1.0E-23 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS03680 e5cf66ec7b7d98ce5dd9b62cd1e67b7c 890 Gene3D G3DSA:1.25.40.20 337 461 1.0E-23 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS00110 baf48dbe04fd234467e56c3ddd6b4b54 156 Pfam PF04586 Caudovirus prohead serine protease 6 147 8.1E-40 T 20-04-2016 IPR006433 Prohead protease APH_RS00110 baf48dbe04fd234467e56c3ddd6b4b54 156 SUPERFAMILY SSF50789 15 132 8.83E-8 T 20-04-2016 APH_RS00110 baf48dbe04fd234467e56c3ddd6b4b54 156 Gene3D G3DSA:3.20.16.10 16 81 3.4E-5 T 20-04-2016 APH_RS00110 baf48dbe04fd234467e56c3ddd6b4b54 156 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 14 146 4.8E-34 T 20-04-2016 IPR006433 Prohead protease APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 228 242 8.0E-6 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 8.0E-6 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 8.0E-6 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 Pfam PF12146 Serine aminopeptidase, S33 26 272 3.3E-16 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 SUPERFAMILY SSF53474 5 285 3.44E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 Gene3D G3DSA:3.40.50.1820 13 285 6.2E-34 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 PANTHER PTHR16138 6 156 3.0E-51 T 20-04-2016 APH_RS00790 f9def4dbfa60b5de4908fdcb9de57dbf 286 PANTHER PTHR16138 193 285 3.0E-51 T 20-04-2016 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 PANTHER PTHR33695 1 149 1.8E-34 T 20-04-2016 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 TIGRFAM TIGR00077 lspA: signal peptidase II 10 149 5.1E-28 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 PANTHER PTHR33695:SF1 1 149 1.8E-34 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 154 14.091 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 Pfam PF01252 Signal peptidase (SPase) II 12 145 1.4E-30 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 1.3E-14 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 1.3E-14 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS04650 ad873bec23347c0542af8cc4c9c7c67b 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 1.3E-14 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APH_RS02385 7ef9705dd90fefa33f8bfd580d695f48 66 Gene3D G3DSA:3.40.50.720 4 34 7.6E-4 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS01190 811a308d84748b70042e4427c3817142 228 Gene3D G3DSA:3.40.50.300 13 225 9.2E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01190 811a308d84748b70042e4427c3817142 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 14 211 1.6E-42 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APH_RS01190 811a308d84748b70042e4427c3817142 228 SUPERFAMILY SSF52540 14 227 4.17E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS01190 811a308d84748b70042e4427c3817142 228 Hamap MF_00238 Cytidylate kinase [cmk]. 14 228 24.587 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APH_RS01190 811a308d84748b70042e4427c3817142 228 Pfam PF02224 Cytidylate kinase 16 224 1.5E-43 T 20-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APH_RS01190 811a308d84748b70042e4427c3817142 228 PANTHER PTHR21299 15 214 8.6E-23 T 20-04-2016 APH_RS00215 2801e32d737e382e8e8495f09b55151a 150 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 146 5.6E-41 T 20-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 APH_RS00215 2801e32d737e382e8e8495f09b55151a 150 Pfam PF02470 MlaD protein 42 116 4.5E-18 T 20-04-2016 IPR003399 Mce/MlaD APH_RS00215 2801e32d737e382e8e8495f09b55151a 150 PANTHER PTHR33371 1 133 7.1E-28 T 20-04-2016 APH_RS02415 cde7007cbc93164405368a99dd9c4a9d 93 Pfam PF11020 Domain of unknown function (DUF2610) 4 83 5.4E-41 T 20-04-2016 IPR021277 Protein of unknown function DUF2610 APH_RS00515 6dca26a6a14df811afa480df3035ebd4 999 Pfam PF13116 Protein of unknown function 337 521 6.9E-7 T 20-04-2016 IPR025263 Domain of unknown function DUF3971 APH_RS00515 6dca26a6a14df811afa480df3035ebd4 999 Pfam PF13502 AsmA-like C-terminal region 827 955 9.1E-11 T 20-04-2016 IPR032712 AsmA-like, C-terminal APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 181 6.3E-24 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 PANTHER PTHR10695 1 223 4.0E-24 T 20-04-2016 APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 17.825 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 PANTHER PTHR10695:SF26 1 223 4.0E-24 T 20-04-2016 APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 Pfam PF01121 Dephospho-CoA kinase 3 179 7.7E-25 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 SUPERFAMILY SSF52540 1 192 1.05E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS03175 0f1ce5a76cad5a74985931abe4692d29 224 Gene3D G3DSA:3.40.50.300 1 193 1.0E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 Gene3D G3DSA:2.40.160.20 87 132 2.1E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 Gene3D G3DSA:2.40.160.20 29 45 2.1E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 Gene3D G3DSA:2.40.160.20 304 420 2.1E-20 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 SUPERFAMILY SSF56925 88 119 2.56E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 SUPERFAMILY SSF56925 304 420 2.56E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 SUPERFAMILY SSF56925 27 46 2.56E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04925 984b68aadcd4cf4ae4977674b83244e8 420 Pfam PF01617 Surface antigen 27 420 4.0E-82 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00820 a0bb9801829e95adc4d550d4f09603b2 157 Pfam PF06271 RDD family 7 148 8.2E-7 T 20-04-2016 IPR010432 RDD APH_RS04450 a694f56cc6cc7917157e27dcc28f8bf4 314 Pfam PF01617 Surface antigen 27 314 3.9E-38 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04450 a694f56cc6cc7917157e27dcc28f8bf4 314 Gene3D G3DSA:2.40.160.20 29 45 4.2E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04450 a694f56cc6cc7917157e27dcc28f8bf4 314 Gene3D G3DSA:2.40.160.20 303 314 4.2E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04450 a694f56cc6cc7917157e27dcc28f8bf4 314 Gene3D G3DSA:2.40.160.20 87 132 4.2E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS02860 37ee730eb01385dc2eb840cb45e6621d 251 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 2 135 1.8E-29 T 20-04-2016 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal APH_RS02860 37ee730eb01385dc2eb840cb45e6621d 251 Pfam PF09356 Phage conserved hypothetical protein BR0599 166 242 6.3E-26 T 20-04-2016 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal APH_RS02860 37ee730eb01385dc2eb840cb45e6621d 251 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 3 242 2.7E-47 T 20-04-2016 IPR011928 Bacteriophage phiJL001, Gp84 APH_RS03990 abf646818e6619d469086d40ca16d682 189 PANTHER PTHR10851 1 189 4.4E-82 T 20-04-2016 APH_RS03990 abf646818e6619d469086d40ca16d682 189 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 158 171 - T 20-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 SUPERFAMILY SSF50475 2 189 7.48E-60 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 1 189 33.241 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 PANTHER PTHR10851:SF0 1 189 4.4E-82 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 Gene3D G3DSA:2.30.110.10 2 189 2.2E-69 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 148 189 6.8E-15 T 20-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 187 3.2E-65 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 PIRSF PIRSF000190 1 189 1.1E-66 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS03990 abf646818e6619d469086d40ca16d682 189 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 17 94 7.6E-20 T 20-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APH_RS02820 08a2b49953dbc0fdbbb5264c10c6e918 146 PANTHER PTHR14021:SF15 2 139 1.1E-20 T 20-04-2016 APH_RS02820 08a2b49953dbc0fdbbb5264c10c6e918 146 SUPERFAMILY SSF46565 4 73 4.19E-11 T 20-04-2016 IPR001623 DnaJ domain APH_RS02820 08a2b49953dbc0fdbbb5264c10c6e918 146 PANTHER PTHR14021 2 139 1.1E-20 T 20-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APH_RS02820 08a2b49953dbc0fdbbb5264c10c6e918 146 Gene3D G3DSA:1.10.287.110 2 73 6.6E-18 T 20-04-2016 IPR001623 DnaJ domain APH_RS02820 08a2b49953dbc0fdbbb5264c10c6e918 146 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 16 92 6.8E-14 T 20-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APH_RS05755 e56e6da7abd7d3368c3464d8babf1e5c 293 SMART SM00248 212 241 79.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS05755 e56e6da7abd7d3368c3464d8babf1e5c 293 SMART SM00248 245 274 0.0017 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APH_RS05755 e56e6da7abd7d3368c3464d8babf1e5c 293 SUPERFAMILY SSF48403 179 281 4.42E-15 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS05755 e56e6da7abd7d3368c3464d8babf1e5c 293 Gene3D G3DSA:1.25.40.20 212 281 1.2E-14 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APH_RS05755 e56e6da7abd7d3368c3464d8babf1e5c 293 Pfam PF13637 Ankyrin repeats (many copies) 216 262 1.5E-9 T 20-04-2016 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 Gene3D G3DSA:2.40.160.20 305 374 3.9E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 Gene3D G3DSA:2.40.160.20 29 45 3.9E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 Gene3D G3DSA:2.40.160.20 87 132 3.9E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 SUPERFAMILY SSF56925 88 119 3.4E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 SUPERFAMILY SSF56925 305 377 3.4E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 SUPERFAMILY SSF56925 27 46 3.4E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05670 9bd1b1921e87c6a24b02694057525900 379 Pfam PF01617 Surface antigen 27 377 4.2E-71 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 398 672 1.9E-21 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 372 2.4E-44 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 PANTHER PTHR33362:SF1 14 344 5.6E-184 T 20-04-2016 APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 PANTHER PTHR33362:SF1 431 730 5.6E-184 T 20-04-2016 APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 25 731 1.2E-172 T 20-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 Pfam PF11874 Domain of unknown function (DUF3394) 679 854 2.8E-34 T 20-04-2016 IPR021814 Protein of unknown function DUF3394 APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 PANTHER PTHR33362 14 344 5.6E-184 T 20-04-2016 APH_RS00665 0bad3eedfcbe218a9be2e415867f8144 859 PANTHER PTHR33362 431 730 5.6E-184 T 20-04-2016 APH_RS05320 720d92299749b11ea230697ca823416c 397 Pfam PF01617 Surface antigen 39 393 6.1E-74 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05320 720d92299749b11ea230697ca823416c 397 Gene3D G3DSA:2.40.160.20 99 144 6.5E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05320 720d92299749b11ea230697ca823416c 397 Gene3D G3DSA:2.40.160.20 308 377 6.5E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05320 720d92299749b11ea230697ca823416c 397 Gene3D G3DSA:2.40.160.20 41 57 6.5E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05320 720d92299749b11ea230697ca823416c 397 SUPERFAMILY SSF56925 100 131 3.4E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05320 720d92299749b11ea230697ca823416c 397 SUPERFAMILY SSF56925 308 381 3.4E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05320 720d92299749b11ea230697ca823416c 397 SUPERFAMILY SSF56925 39 58 3.4E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01485 b7fb98aa7d8cabeff326c00ac2a2271a 85 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 79 2.6E-12 T 20-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 APH_RS04360 380b7f93c69904c44b121706c89930af 204 SUPERFAMILY SSF53098 18 190 3.36E-48 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS04360 380b7f93c69904c44b121706c89930af 204 Gene3D G3DSA:3.30.420.10 18 184 3.1E-20 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS04360 380b7f93c69904c44b121706c89930af 204 PANTHER PTHR12124 19 183 3.0E-72 T 20-04-2016 APH_RS04360 380b7f93c69904c44b121706c89930af 204 SMART SM00474 1 168 2.6E-34 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_RS04360 380b7f93c69904c44b121706c89930af 204 Pfam PF01612 3'-5' exonuclease 19 168 2.0E-36 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_RS04360 380b7f93c69904c44b121706c89930af 204 PANTHER PTHR12124:SF48 19 183 3.0E-72 T 20-04-2016 APH_RS05895 5064e42428e02652833c50e89d043778 128 Gene3D G3DSA:2.40.160.20 59 114 3.6E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05895 5064e42428e02652833c50e89d043778 128 Pfam PF01617 Surface antigen 47 119 2.8E-18 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS01155 ea5508d59cca4bdb7d6bc11684eda3c2 122 SUPERFAMILY SSF102829 5 85 3.79E-9 T 20-04-2016 IPR007838 Cell division protein ZapA-like APH_RS01155 ea5508d59cca4bdb7d6bc11684eda3c2 122 Pfam PF05164 Cell division protein ZapA 5 92 5.7E-10 T 20-04-2016 IPR007838 Cell division protein ZapA-like APH_RS00425 d125b78fecb374c314c4a4f05d154d09 73 SUPERFAMILY SSF143800 1 72 1.92E-11 T 20-04-2016 APH_RS00425 d125b78fecb374c314c4a4f05d154d09 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 72 1.3E-10 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS00425 d125b78fecb374c314c4a4f05d154d09 73 Pfam PF01197 Ribosomal protein L31 1 71 1.4E-13 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 SUPERFAMILY SSF161098 8 258 2.43E-30 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 SUPERFAMILY SSF161098 283 529 2.24E-34 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 PANTHER PTHR30183 4 534 4.7E-125 T 20-04-2016 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 525 6.0E-8 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 252 1.9E-6 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 Gene3D G3DSA:1.10.3720.10 7 261 1.5E-23 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 Gene3D G3DSA:1.10.3720.10 289 530 8.4E-29 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS04150 125d89e9e23d2cbb442c2f10ab94d0fb 543 PANTHER PTHR30183:SF2 4 534 4.7E-125 T 20-04-2016 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PANTHER PTHR22773:SF40 1 371 1.3E-132 T 20-04-2016 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 51 75 1.8E-42 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 21 40 1.8E-42 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 264 290 1.8E-42 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 124 148 1.8E-42 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 212 231 1.8E-42 T 20-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 Pfam PF00361 Proton-conducting membrane transporter 19 306 1.4E-61 T 20-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 PANTHER PTHR22773 1 371 1.3E-132 T 20-04-2016 APH_RS01945 5f4c90aa7db7aa9a063dd3039852fadf 382 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 1 371 4.2E-127 T 20-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 APH_RS01260 45fe9ec7943c7ae797a4c430f3afca60 68 Pfam PF00831 Ribosomal L29 protein 6 59 1.6E-11 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01260 45fe9ec7943c7ae797a4c430f3afca60 68 Gene3D G3DSA:1.10.287.310 4 63 4.6E-12 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01260 45fe9ec7943c7ae797a4c430f3afca60 68 SUPERFAMILY SSF46561 4 63 1.24E-12 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01260 45fe9ec7943c7ae797a4c430f3afca60 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 11.358 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01260 45fe9ec7943c7ae797a4c430f3afca60 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 59 2.1E-11 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_RS01245 ebba153262e21c6c7457993230947046 112 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 12 107 1.8E-30 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APH_RS01245 ebba153262e21c6c7457993230947046 112 SUPERFAMILY SSF54843 4 111 2.75E-34 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APH_RS01245 ebba153262e21c6c7457993230947046 112 PANTHER PTHR13501 5 109 2.4E-30 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APH_RS01245 ebba153262e21c6c7457993230947046 112 Gene3D G3DSA:3.90.470.10 7 111 8.2E-33 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APH_RS01245 ebba153262e21c6c7457993230947046 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 23.112 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APH_RS01245 ebba153262e21c6c7457993230947046 112 Pfam PF00237 Ribosomal protein L22p/L17e 12 108 1.2E-26 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 246 18.312 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 PANTHER PTHR30371:SF0 5 246 7.9E-82 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 161 189 1.92E-38 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.92E-38 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.92E-38 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.92E-38 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 ProSitePatterns PS01218 TatC family signature. 161 180 - T 20-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 233 1.6E-63 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 PANTHER PTHR30371 5 246 7.9E-82 T 20-04-2016 APH_RS01970 35bd9fb560b25f791c1d9699db5a695c 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 228 3.7E-65 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_RS05295 76c2e70b555411424761b0d72a53ad5a 147 PIRSF PIRSF004638 1 147 2.1E-42 T 20-04-2016 IPR005265 Uncharacterised protein family UPF0093 APH_RS05295 76c2e70b555411424761b0d72a53ad5a 147 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 146 1.2E-47 T 20-04-2016 IPR005265 Uncharacterised protein family UPF0093 APH_RS05295 76c2e70b555411424761b0d72a53ad5a 147 PANTHER PTHR40255 6 146 2.7E-33 T 20-04-2016 APH_RS01495 398e21e1eee12fe3ef58845d50f11965 188 PANTHER PTHR33932:SF1 6 187 4.6E-26 T 20-04-2016 APH_RS01495 398e21e1eee12fe3ef58845d50f11965 188 Pfam PF13244 Domain of unknown function (DUF4040) 14 78 8.5E-16 T 20-04-2016 IPR025383 Domain of unknown function DUF4040 APH_RS01495 398e21e1eee12fe3ef58845d50f11965 188 PANTHER PTHR33932 6 187 4.6E-26 T 20-04-2016 APH_RS01665 3d46bf5f150c65bb11304c944dafac4e 324 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 9 288 4.8E-95 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APH_RS01665 3d46bf5f150c65bb11304c944dafac4e 324 PANTHER PTHR30426 8 312 5.2E-137 T 20-04-2016 APH_RS01665 3d46bf5f150c65bb11304c944dafac4e 324 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 8 292 36.014 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APH_RS01665 3d46bf5f150c65bb11304c944dafac4e 324 Pfam PF02401 LytB protein 10 287 3.9E-89 T 20-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APH_RS02465 51d871f097bb22a98af932e2ac94091a 100 Gene3D G3DSA:3.30.70.830 1 96 1.8E-33 T 20-04-2016 APH_RS02465 51d871f097bb22a98af932e2ac94091a 100 SUPERFAMILY SSF54913 2 94 7.78E-31 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APH_RS02465 51d871f097bb22a98af932e2ac94091a 100 PANTHER PTHR23419 2 99 4.8E-29 T 20-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APH_RS02465 51d871f097bb22a98af932e2ac94091a 100 Pfam PF03091 CutA1 divalent ion tolerance protein 2 92 1.6E-29 T 20-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APH_RS00140 844c24fe2f4a8c35bcc8fd1409a407de 152 Pfam PF01617 Surface antigen 75 149 1.5E-18 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00140 844c24fe2f4a8c35bcc8fd1409a407de 152 Gene3D G3DSA:2.40.160.20 94 149 1.2E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PANTHER PTHR10755 2 273 6.1E-114 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PIRSF PIRSF000166 1 274 4.1E-108 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 Pfam PF01218 Coproporphyrinogen III oxidase 9 273 2.0E-96 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 Gene3D G3DSA:3.40.1500.10 3 273 7.2E-107 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 SUPERFAMILY SSF102886 3 273 4.19E-107 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 231 258 5.3E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 259 274 5.3E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 160 189 5.3E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 35 51 5.3E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS01870 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 123 145 5.3E-43 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APH_RS03940 c848d31abc3861b41a0890feea5b2e7a 366 Pfam PF01594 Domain of unknown function DUF20 10 352 2.4E-43 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APH_RS03940 c848d31abc3861b41a0890feea5b2e7a 366 PANTHER PTHR21716 4 350 8.7E-47 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APH_RS04835 b04feef350c3c6468b32580c3fb1f4fc 122 PANTHER PTHR30009:SF0 41 116 1.4E-14 T 20-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_RS04835 b04feef350c3c6468b32580c3fb1f4fc 122 PANTHER PTHR30009 41 116 1.4E-14 T 20-04-2016 APH_RS03955 c3c74d239adc349929c52d4c0642278d 109 SUPERFAMILY SSF81343 3 102 1.72E-17 T 20-04-2016 APH_RS03955 c3c74d239adc349929c52d4c0642278d 109 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 4 102 1.3E-22 T 20-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 APH_RS03955 c3c74d239adc349929c52d4c0642278d 109 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 94 1.1E-9 T 20-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APH_RS03955 c3c74d239adc349929c52d4c0642278d 109 Gene3D G3DSA:1.20.1300.10 5 103 2.7E-17 T 20-04-2016 APH_RS00220 ef7e9163e1114470fd23b2bd8460ba9c 101 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 21 97 5.9E-14 T 20-04-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 APH_RS01175 42667476d9449671598fb66002924058 97 Gene3D G3DSA:4.10.520.10 3 87 1.2E-11 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APH_RS01175 42667476d9449671598fb66002924058 97 SUPERFAMILY SSF47729 3 86 5.59E-12 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APH_RS01175 42667476d9449671598fb66002924058 97 Pfam PF00216 Bacterial DNA-binding protein 3 86 1.1E-9 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 SUPERFAMILY SSF161098 174 399 5.36E-33 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 Pfam PF11812 Domain of unknown function (DUF3333) 21 132 5.3E-14 T 20-04-2016 IPR024573 Domain of unknown function DUF3333 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 PANTHER PTHR30425 157 414 6.1E-72 T 20-04-2016 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 PANTHER PTHR30425 21 58 6.1E-72 T 20-04-2016 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 212 411 6.6E-20 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 PANTHER PTHR30425:SF2 157 414 6.1E-72 T 20-04-2016 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 PANTHER PTHR30425:SF2 21 58 6.1E-72 T 20-04-2016 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 172 410 4.5E-61 T 20-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APH_RS01615 a06feadc42e11062dd0f5e1cfeb881cf 415 Gene3D G3DSA:1.10.3720.10 179 410 5.7E-43 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APH_RS01560 582aa77da39eebb5b4ae87c367725659 230 SUPERFAMILY SSF69618 2 229 1.44E-35 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS01560 582aa77da39eebb5b4ae87c367725659 230 Pfam PF02602 Uroporphyrinogen-III synthase HemD 16 225 8.8E-32 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APH_RS01560 582aa77da39eebb5b4ae87c367725659 230 Gene3D G3DSA:3.40.50.10090 132 229 1.7E-9 T 20-04-2016 APH_RS01560 582aa77da39eebb5b4ae87c367725659 230 Gene3D G3DSA:3.40.50.10090 29 131 4.1E-14 T 20-04-2016 APH_RS01795 57afd2bc03ec4e85a359e04c3b9bc740 545 SUPERFAMILY SSF56935 78 190 2.75E-7 T 20-04-2016 APH_RS01795 57afd2bc03ec4e85a359e04c3b9bc740 545 SUPERFAMILY SSF56935 229 258 2.75E-7 T 20-04-2016 APH_RS01795 57afd2bc03ec4e85a359e04c3b9bc740 545 SUPERFAMILY SSF56935 305 493 2.75E-7 T 20-04-2016 APH_RS05400 6cffb2d5c285f052e80b83c39320849a 206 SUPERFAMILY SSF56925 130 201 8.11E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05400 6cffb2d5c285f052e80b83c39320849a 206 Pfam PF01617 Surface antigen 93 201 6.2E-32 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05400 6cffb2d5c285f052e80b83c39320849a 206 Gene3D G3DSA:2.40.160.20 113 199 6.1E-8 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05660 4913b2a6d727dbef95a27c7b0d47a54c 180 Gene3D G3DSA:2.40.160.20 120 165 1.6E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05660 4913b2a6d727dbef95a27c7b0d47a54c 180 Pfam PF01617 Surface antigen 91 178 1.2E-20 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00365 4d467208825ff8750a914c17bf9dd327 307 Pfam PF03547 Membrane transport protein 6 124 2.0E-6 T 20-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APH_RS03910 850eeacb80acfb2f7928f086470811de 56 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 44 5.3E-17 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APH_RS03910 850eeacb80acfb2f7928f086470811de 56 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 51 17.144 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APH_RS03910 850eeacb80acfb2f7928f086470811de 56 Pfam PF02416 mttA/Hcf106 family 3 44 5.5E-12 T 20-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APH_RS05440 73e175b6d244da756b99208e37f3a8ae 412 Gene3D G3DSA:1.25.40.10 117 344 2.5E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS05440 73e175b6d244da756b99208e37f3a8ae 412 SUPERFAMILY SSF48452 115 143 4.56E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS05440 73e175b6d244da756b99208e37f3a8ae 412 SUPERFAMILY SSF48452 220 343 4.56E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APH_RS05260 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 SUPERFAMILY SSF51735 1 254 2.98E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05260 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 PANTHER PTHR12126 2 283 8.4E-58 T 20-04-2016 APH_RS05260 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 Gene3D G3DSA:3.40.50.720 1 223 3.4E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APH_RS05260 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 PANTHER PTHR12126:SF1 2 283 8.4E-58 T 20-04-2016 APH_RS05260 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 201 1.2E-15 T 20-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APH_RS00945 3e68a596cc2e6cabd700b168665a39b4 104 SUPERFAMILY SSF51126 17 100 9.42E-5 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APH_RS04275 c74a6abd762b0cfb486b6f2a3530c830 270 Gene3D G3DSA:2.40.160.20 188 251 1.7E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04275 c74a6abd762b0cfb486b6f2a3530c830 270 Pfam PF01617 Surface antigen 175 258 1.3E-19 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS02330 af035869cb364c3dccb42221283eefc0 103 SUPERFAMILY SSF53706 1 83 1.52E-6 T 20-04-2016 APH_RS02330 af035869cb364c3dccb42221283eefc0 103 Pfam PF00384 Molybdopterin oxidoreductase 1 70 7.2E-8 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APH_RS00255 33ac532af12c71a454b2b05f5b969081 427 Pfam PF00083 Sugar (and other) transporter 11 215 1.1E-19 T 20-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APH_RS00255 33ac532af12c71a454b2b05f5b969081 427 Gene3D G3DSA:1.20.1250.20 7 207 1.0E-14 T 20-04-2016 APH_RS00255 33ac532af12c71a454b2b05f5b969081 427 Gene3D G3DSA:1.20.1250.20 231 416 8.8E-18 T 20-04-2016 APH_RS00255 33ac532af12c71a454b2b05f5b969081 427 SUPERFAMILY SSF103473 7 414 7.59E-54 T 20-04-2016 IPR020846 Major facilitator superfamily domain APH_RS00255 33ac532af12c71a454b2b05f5b969081 427 PANTHER PTHR23508:SF1 8 412 3.7E-106 T 20-04-2016 APH_RS00255 33ac532af12c71a454b2b05f5b969081 427 PANTHER PTHR23508 8 412 3.7E-106 T 20-04-2016 APH_RS04500 1e48049cd44a026c1130b2681fed2fda 797 SUPERFAMILY SSF52540 428 748 3.93E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_RS04500 1e48049cd44a026c1130b2681fed2fda 797 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 209 396 5.5E-15 T 20-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 APH_RS03395 16024609b5b9158a15095a3b1af01440 425 Pfam PF00083 Sugar (and other) transporter 17 223 2.7E-14 T 20-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APH_RS03395 16024609b5b9158a15095a3b1af01440 425 SUPERFAMILY SSF103473 15 416 8.24E-34 T 20-04-2016 IPR020846 Major facilitator superfamily domain APH_RS03395 16024609b5b9158a15095a3b1af01440 425 Gene3D G3DSA:1.20.1250.20 59 219 3.5E-10 T 20-04-2016 APH_RS03395 16024609b5b9158a15095a3b1af01440 425 PANTHER PTHR23508 15 419 4.4E-52 T 20-04-2016 APH_RS04845 93e0d359e890ff34e68ccf9ab449d204 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 72 1.1E-15 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_RS04845 93e0d359e890ff34e68ccf9ab449d204 181 PANTHER PTHR14269 6 176 7.9E-40 T 20-04-2016 APH_RS04845 93e0d359e890ff34e68ccf9ab449d204 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 175 4.9E-45 T 20-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APH_RS04845 93e0d359e890ff34e68ccf9ab449d204 181 PIRSF PIRSF000847 1 181 9.5E-44 T 20-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APH_RS04845 93e0d359e890ff34e68ccf9ab449d204 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_RS01935 e83fde6a6e3a490a3f59fd97ac9f1305 108 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 9 108 17.954 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APH_RS01935 e83fde6a6e3a490a3f59fd97ac9f1305 108 PANTHER PTHR11434 10 107 3.0E-34 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APH_RS01935 e83fde6a6e3a490a3f59fd97ac9f1305 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 14 100 1.2E-21 T 20-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APH_RS00430 b827fc217624bb687574ef2aa2cea2ef 171 Pfam PF04860 Phage portal protein 21 171 1.4E-28 T 20-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APH_RS03440 0cdae82fde5b11f6c5e188d4daaf7d22 443 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 26 389 1.7E-85 T 20-04-2016 IPR006444 Phage major capsid protein, HK97 APH_RS03440 0cdae82fde5b11f6c5e188d4daaf7d22 443 SUPERFAMILY SSF56563 109 390 9.68E-61 T 20-04-2016 APH_RS03440 0cdae82fde5b11f6c5e188d4daaf7d22 443 Pfam PF05065 Phage capsid family 115 388 1.2E-73 T 20-04-2016 IPR024455 Phage capsid APH_RS05705 0bb5b80a420557ed3916fbe313c5fde0 255 Pfam PF01617 Surface antigen 7 255 4.9E-21 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00670 4dd72c1b0b2b18d28dd342da3be3921d 199 Pfam PF02674 Colicin V production protein 3 152 5.1E-27 T 20-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APH_RS05835 93cc47e5b7292db7c09c412421e505ed 220 PANTHER PTHR35562:SF2 104 217 5.5E-20 T 20-04-2016 APH_RS05835 93cc47e5b7292db7c09c412421e505ed 220 Pfam PF01713 Smr domain 123 206 8.0E-18 T 20-04-2016 IPR002625 Smr domain APH_RS05835 93cc47e5b7292db7c09c412421e505ed 220 PANTHER PTHR35562 104 217 5.5E-20 T 20-04-2016 APH_RS05835 93cc47e5b7292db7c09c412421e505ed 220 SUPERFAMILY SSF160443 120 206 2.75E-15 T 20-04-2016 IPR002625 Smr domain APH_RS00900 5aa4b0d59708d6b28a9fffe8e10078a2 295 Pfam PF00990 Diguanylate cyclase, GGDEF domain 199 288 1.2E-5 T 20-04-2016 IPR000160 GGDEF domain APH_RS00900 5aa4b0d59708d6b28a9fffe8e10078a2 295 Gene3D G3DSA:3.30.70.270 201 289 6.8E-8 T 20-04-2016 APH_RS00900 5aa4b0d59708d6b28a9fffe8e10078a2 295 SUPERFAMILY SSF55073 199 289 6.75E-8 T 20-04-2016 IPR029787 Nucleotide cyclase APH_RS04505 47d61543220ed16f4c821c76eeb0a15d 123 Pfam PF04956 TrbC/VIRB2 family 15 101 1.4E-16 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS01890 a733accdc2dd667fc55ae9c9a32a90bd 431 PANTHER PTHR30563 20 424 6.9E-85 T 20-04-2016 APH_RS01890 a733accdc2dd667fc55ae9c9a32a90bd 431 Pfam PF02646 RmuC family 123 422 2.3E-92 T 20-04-2016 IPR003798 DNA recombination RmuC APH_RS05725 5ba4a393b44684edaa5297ead817f004 280 Pfam PF03524 Conjugal transfer protein 38 277 1.8E-53 T 20-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APH_RS05725 5ba4a393b44684edaa5297ead817f004 280 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 12 278 4.2E-74 T 20-04-2016 IPR014148 P-type conjugative transfer protein VirB9 APH_RS04510 42f845eb06c945f5adf8491180c7e43e 119 Pfam PF04956 TrbC/VIRB2 family 3 99 1.3E-16 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS05325 a30a9b1f613cdc7f9788ad1f94c98a49 303 Gene3D G3DSA:2.40.160.20 181 303 2.0E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05325 a30a9b1f613cdc7f9788ad1f94c98a49 303 SUPERFAMILY SSF56925 181 303 9.42E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05325 a30a9b1f613cdc7f9788ad1f94c98a49 303 Pfam PF01617 Surface antigen 144 303 8.8E-52 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05815 417c8d5be044cc36443a0fcee19f0e5e 106 Pfam PF01617 Surface antigen 70 100 3.1E-6 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00525 c9860188901510a6708aac970c637d83 171 Pfam PF01765 Ribosome recycling factor 10 170 9.5E-49 T 20-04-2016 IPR023584 Ribosome recycling factor domain APH_RS00525 c9860188901510a6708aac970c637d83 171 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 170 4.1E-51 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APH_RS00525 c9860188901510a6708aac970c637d83 171 PANTHER PTHR20982 1 171 6.6E-55 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APH_RS00525 c9860188901510a6708aac970c637d83 171 SUPERFAMILY SSF55194 1 170 9.55E-54 T 20-04-2016 IPR023584 Ribosome recycling factor domain APH_RS00525 c9860188901510a6708aac970c637d83 171 Gene3D G3DSA:1.10.132.20 54 170 3.6E-35 T 20-04-2016 IPR023584 Ribosome recycling factor domain APH_RS00605 0c8caedbd4aef29308a54cbce4417a15 89 Gene3D G3DSA:2.40.50.140 11 86 2.8E-25 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00605 0c8caedbd4aef29308a54cbce4417a15 89 SMART SM00357 12 87 5.9E-16 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APH_RS00605 0c8caedbd4aef29308a54cbce4417a15 89 SUPERFAMILY SSF50249 10 86 6.37E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APH_RS00605 0c8caedbd4aef29308a54cbce4417a15 89 PIRSF PIRSF002599 7 89 1.3E-16 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 APH_RS00605 0c8caedbd4aef29308a54cbce4417a15 89 Pfam PF00313 'Cold-shock' DNA-binding domain 12 32 6.9E-6 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APH_RS00605 0c8caedbd4aef29308a54cbce4417a15 89 Pfam PF00313 'Cold-shock' DNA-binding domain 42 85 2.7E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APH_RS02625 eeed3f60b0d94c65aa96ccadc8a449cd 201 Pfam PF06271 RDD family 35 184 5.9E-21 T 20-04-2016 IPR010432 RDD APH_RS05830 9cc0f4ed53b0cd37a8575882b5f7c383 2339 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 298 496 5.7E-14 T 20-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_RS04975 ccb0ed38f177ec4732b675b2ae301749 403 Pfam PF08886 Glutamate-cysteine ligase 8 388 5.3E-140 T 20-04-2016 IPR011718 Glutamate--cysteine ligase GshA APH_RS04975 ccb0ed38f177ec4732b675b2ae301749 403 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 10 388 1.6E-115 T 20-04-2016 IPR011718 Glutamate--cysteine ligase GshA APH_RS02855 9c670e64f12069a97c94373d2f5d924b 135 Pfam PF03918 Cytochrome C biogenesis protein 17 131 3.5E-26 T 20-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family APH_RS03190 4361d629ba091ea12b95feed5106f36e 91 SMART SM00411 1 90 9.6E-5 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_RS03190 4361d629ba091ea12b95feed5106f36e 91 SUPERFAMILY SSF47729 1 90 2.06E-18 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APH_RS03190 4361d629ba091ea12b95feed5106f36e 91 Gene3D G3DSA:4.10.520.10 1 90 1.2E-17 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APH_RS03190 4361d629ba091ea12b95feed5106f36e 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.8E-19 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_RS00350 fe23be79c4838fc3b4d83eac4c83032c 393 SUPERFAMILY SSF109998 26 179 2.9E-18 T 20-04-2016 IPR027304 Trigger factor/SurA domain APH_RS00965 f977f149a90e0866ccb1cf46dc9477f0 151 Pfam PF07310 PAS domain 10 145 1.7E-16 T 20-04-2016 IPR009922 Protein of unknown function DUF1457 APH_RS03805 18efa7dc620704939ca95f9afb7494fd 165 PANTHER PTHR24023 4 160 2.7E-29 T 20-04-2016 APH_RS03805 18efa7dc620704939ca95f9afb7494fd 165 Pfam PF01391 Collagen triple helix repeat (20 copies) 7 60 1.8E-9 T 20-04-2016 IPR008160 Collagen triple helix repeat APH_RS03805 18efa7dc620704939ca95f9afb7494fd 165 Pfam PF01391 Collagen triple helix repeat (20 copies) 66 104 4.9E-9 T 20-04-2016 IPR008160 Collagen triple helix repeat APH_RS03805 18efa7dc620704939ca95f9afb7494fd 165 Pfam PF01391 Collagen triple helix repeat (20 copies) 104 158 2.7E-9 T 20-04-2016 IPR008160 Collagen triple helix repeat APH_RS03805 18efa7dc620704939ca95f9afb7494fd 165 PANTHER PTHR24023:SF588 4 160 2.7E-29 T 20-04-2016 APH_RS04480 476bd90c8850c225ad18c1ff0c875103 95 SUPERFAMILY SSF56925 10 87 1.96E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04480 476bd90c8850c225ad18c1ff0c875103 95 Gene3D G3DSA:2.40.160.20 12 87 6.3E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04480 476bd90c8850c225ad18c1ff0c875103 95 Pfam PF01617 Surface antigen 7 87 2.6E-26 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05735 b40f2099af4bb9dfa672ddd9ac689793 271 Pfam PF01617 Surface antigen 3 94 3.1E-21 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS00490 38a36f41b57a192ada1978cbfd7062d3 67 PANTHER PTHR21499 5 66 1.1E-15 T 20-04-2016 APH_RS00490 38a36f41b57a192ada1978cbfd7062d3 67 PANTHER PTHR21499:SF20 5 66 1.1E-15 T 20-04-2016 APH_RS00490 38a36f41b57a192ada1978cbfd7062d3 67 Gene3D G3DSA:3.40.1160.10 4 65 6.8E-12 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS00490 38a36f41b57a192ada1978cbfd7062d3 67 SUPERFAMILY SSF53633 5 63 1.57E-11 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APH_RS04015 81cddfa403be33d548ea529f5103e3a4 188 Pfam PF01899 Na+/H+ ion antiporter subunit 31 168 1.5E-18 T 20-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 APH_RS01895 76710465ea6b490e0cf8a10834beb087 231 SUPERFAMILY SSF54427 93 228 3.33E-6 T 20-04-2016 IPR032710 NTF2-like domain APH_RS01895 76710465ea6b490e0cf8a10834beb087 231 Pfam PF04335 VirB8 protein 19 209 5.3E-6 T 20-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 APH_RS04515 76f9220d8d769e03d631ed63d2a0f079 124 Pfam PF04956 TrbC/VIRB2 family 4 99 2.3E-16 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS05330 8be999562349aaae65bc46b3e898cc3c 262 Pfam PF01617 Surface antigen 3 261 1.6E-24 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 Gene3D G3DSA:2.40.160.20 29 45 3.2E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 Gene3D G3DSA:2.40.160.20 87 134 3.2E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 Gene3D G3DSA:2.40.160.20 308 378 3.2E-19 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 Pfam PF01617 Surface antigen 27 416 5.2E-78 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 SUPERFAMILY SSF56925 308 417 3.92E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 SUPERFAMILY SSF56925 88 119 3.92E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS04890 18d09b34e696e3953022a6dd5a4a1f46 433 SUPERFAMILY SSF56925 27 46 3.92E-15 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05240 86145393c7f4109e3b33b3ad1286b541 76 Gene3D G3DSA:3.30.420.10 8 61 1.5E-4 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APH_RS02845 65a932f55f0b5bc85c855757bbd2cbc8 879 SUPERFAMILY SSF51445 446 490 6.19E-6 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APH_RS02845 65a932f55f0b5bc85c855757bbd2cbc8 879 SUPERFAMILY SSF51445 536 633 6.19E-6 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APH_RS02845 65a932f55f0b5bc85c855757bbd2cbc8 879 Pfam PF13550 Putative phage tail protein 700 848 5.0E-18 T 20-04-2016 IPR032876 Tip attachment protein J APH_RS02845 65a932f55f0b5bc85c855757bbd2cbc8 879 Pfam PF13547 GTA TIM-barrel-like domain 391 637 1.3E-31 T 20-04-2016 IPR025195 GTA TIM-barrel-like domain APH_RS04045 790c692803c08aac672144f37a538f50 147 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 7 128 1.0E-28 T 20-04-2016 IPR020143 Uncharacterised protein family, RP436 APH_RS04270 06eabf7bc277c8d02a448097206777fd 76 Pfam PF01617 Surface antigen 1 59 1.2E-12 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS01655 3769c3b81e0afe00a10b35a4b622c578 206 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 10 204 4.1E-63 T 20-04-2016 IPR011740 Protein of unknown function DUF2460 APH_RS01655 3769c3b81e0afe00a10b35a4b622c578 206 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 9 204 1.8E-56 T 20-04-2016 IPR011740 Protein of unknown function DUF2460 APH_RS02505 231563f1371d23e7da7c848e92019c36 164 SUPERFAMILY SSF118215 1 162 2.75E-10 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APH_RS03900 54d2011d7661346e8bf996fb1d6393dd 178 Pfam PF11412 Disulphide bond corrector protein DsbC 44 154 4.9E-13 T 20-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APH_RS04570 e719eadd4f019df8a42be31ca544cc82 123 Pfam PF04956 TrbC/VIRB2 family 5 95 6.7E-17 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS00650 a59a682fc8fa264c14122da848bb38a1 67 Pfam PF01617 Surface antigen 1 67 1.5E-19 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05825 439d1d60e82fd8717aa8f3acbb5489a8 1477 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 827 1022 1.5E-18 T 20-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_RS01435 6ebbba338e88aa5aadd3d1422171525d 315 SUPERFAMILY SSF54534 223 286 2.16E-6 T 20-04-2016 APH_RS01435 6ebbba338e88aa5aadd3d1422171525d 315 Gene3D G3DSA:3.10.50.40 227 285 4.1E-6 T 20-04-2016 APH_RS04530 947aa0c7a2dd2d1797d382fafb0b3713 120 Pfam PF04956 TrbC/VIRB2 family 3 100 1.6E-17 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS04520 4c9a1bf320521fd7b1fb9ed54122ee36 119 Pfam PF04956 TrbC/VIRB2 family 3 100 3.5E-17 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS04540 25d3a1603577605db6a217937721675f 116 Pfam PF04956 TrbC/VIRB2 family 7 101 6.1E-16 T 20-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_RS05020 e657632364d550e990f71242bd6c840a 313 Pfam PF01617 Surface antigen 27 311 7.4E-32 T 20-04-2016 IPR002566 Surface antigen msp4 APH_RS05020 e657632364d550e990f71242bd6c840a 313 Gene3D G3DSA:2.40.160.20 29 45 1.1E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS05020 e657632364d550e990f71242bd6c840a 313 Gene3D G3DSA:2.40.160.20 87 127 1.1E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APH_RS01635 867552284eed534246dda6d4f5580866 846 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 556 663 3.8E-10 T 20-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_RS03775 88cb7a0acc0123ea7a75621fe299ac92 92 Pfam PF02325 YGGT family 10 85 1.6E-12 T 20-04-2016 IPR003425 CCB3/YggT GO:0016020 APH_RS01790 eee2517e270b2fc6121c91f849ae7edf 567 Gene3D G3DSA:2.40.160.10 209 258 1.4E-7 T 20-04-2016 IPR023614 Porin domain APH_RS01790 eee2517e270b2fc6121c91f849ae7edf 567 Gene3D G3DSA:2.40.160.10 336 494 1.4E-7 T 20-04-2016 IPR023614 Porin domain