YYU_RS00005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YYU_RS00005 SM00475 5'-3' exonuclease YYU_RS00005 SM00482 DNA polymerase A domain YYU_RS00020 SM00382 ATPases associated with a variety of cellular activities YYU_RS00075 SM00271 DnaJ molecular chaperone homology domain YYU_RS00085 SM01207 YYU_RS00085 YYU_RS00105 SM01091 Transporter associated domain YYU_RS00190 SM00382 ATPases associated with a variety of cellular activities YYU_RS00195 SM00919 Malic enzyme, NAD binding domain YYU_RS00195 SM01274 YYU_RS00195 YYU_RS00300 SM00357 Cold shock protein domain YYU_RS00300 SM00382 ATPases associated with a variety of cellular activities YYU_RS00300 SM00959 Rho termination factor, N-terminal domain YYU_RS00310 SM00271 DnaJ molecular chaperone homology domain YYU_RS00315 SM00932 Scaffold protein Nfu/NifU N terminal YYU_RS00420 SM00116 Domain in cystathionine beta-synthase and other proteins. YYU_RS00420 SM01240 YYU_RS00420 YYU_RS00440 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YYU_RS00460 SM00978 YYU_RS00460 YYU_RS00510 SM00487 DEAD-like helicases superfamily YYU_RS00510 SM00490 helicase superfamily c-terminal domain YYU_RS00510 SM00982 YYU_RS00510 YYU_RS00510 SM01058 CarD-like/TRCF domain YYU_RS00585 SM00865 Tubulin/FtsZ family, C-terminal domain YYU_RS00615 SM00357 Cold shock protein domain YYU_RS00620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YYU_RS00620 SM00387 Histidine kinase-like ATPases YYU_RS00620 SM00388 His Kinase A (phosphoacceptor) domain YYU_RS00625 SM00474 3'-5' exonuclease YYU_RS00630 SM00292 breast cancer carboxy-terminal domain YYU_RS00630 SM00532 Ligase N family YYU_RS00670 SM00072 Guanylate kinase homologues. YYU_RS00705 SM01219 YYU_RS00705 YYU_RS00710 SM00382 ATPases associated with a variety of cellular activities YYU_RS00755 SM00382 ATPases associated with a variety of cellular activities YYU_RS00770 SM00072 Guanylate kinase homologues. YYU_RS00850 SM00749 bacterial OsmY and nodulation domain YYU_RS00865 SM00382 ATPases associated with a variety of cellular activities YYU_RS00865 SM00448 cheY-homologous receiver domain YYU_RS00955 SM00729 Elongator protein 3, MiaB family, Radical SAM YYU_RS00955 SM00876 Biotin and Thiamin Synthesis associated domain YYU_RS00980 SM01228 YYU_RS00980 YYU_RS00985 SM01211 YYU_RS00985 YYU_RS01035 SM00382 ATPases associated with a variety of cellular activities YYU_RS01035 SM01086 C-terminal, D2-small domain, of ClpB protein YYU_RS01060 SM00883 Chaperonin 10 Kd subunit YYU_RS01095 SM00851 MGS-like domain YYU_RS01095 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YYU_RS01105 SM00382 ATPases associated with a variety of cellular activities YYU_RS01110 SM00829 Enoylreductase YYU_RS01125 SM00244 prohibitin homologues YYU_RS01180 SM00316 Ribosomal protein S1-like RNA-binding domain YYU_RS01190 SM00967 RNA 2'-O ribose methyltransferase substrate binding YYU_RS01210 SM01403 YYU_RS01210 YYU_RS01230 SM01382 YYU_RS01230 YYU_RS01230 SM01383 YYU_RS01230 YYU_RS01245 SM00322 K homology RNA-binding domain YYU_RS01265 SM01374 YYU_RS01265 YYU_RS01270 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YYU_RS01330 SM00662 RNA polymerases D YYU_RS01340 SM00873 B3/4 domain YYU_RS01340 SM00874 tRNA synthetase B5 domain YYU_RS01340 SM00896 Ferredoxin-fold anticodon binding domain YYU_RS01365 SM00903 Flavin reductase like domain YYU_RS01370 SM00382 ATPases associated with a variety of cellular activities YYU_RS01420 SM00861 Transketolase, pyrimidine binding domain YYU_RS01450 SM00732 Likely ribonuclease with RNase H fold. YYU_RS01455 SM00788 Adenylosuccinate synthetase YYU_RS01475 SM00861 Transketolase, pyrimidine binding domain YYU_RS01525 SM00382 ATPases associated with a variety of cellular activities YYU_RS01525 SM00962 SRP54-type protein, GTPase domain YYU_RS01525 SM00963 SRP54-type protein, helical bundle domain YYU_RS01565 SM00487 DEAD-like helicases superfamily YYU_RS01565 SM00490 helicase superfamily c-terminal domain YYU_RS01585 SM00878 Biotin carboxylase C-terminal domain YYU_RS01600 SM00729 Elongator protein 3, MiaB family, Radical SAM YYU_RS01625 SM00382 ATPases associated with a variety of cellular activities YYU_RS01670 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YYU_RS01720 SM00564 beta-propeller repeat YYU_RS01820 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YYU_RS01820 SM01232 YYU_RS01820 YYU_RS01840 SM00382 ATPases associated with a variety of cellular activities YYU_RS01845 SM00937 YYU_RS01845 YYU_RS01905 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YYU_RS01965 SM00316 Ribosomal protein S1-like RNA-binding domain YYU_RS01965 SM00322 K homology RNA-binding domain YYU_RS01990 SM00382 ATPases associated with a variety of cellular activities YYU_RS01990 SM01086 C-terminal, D2-small domain, of ClpB protein YYU_RS01995 SM00838 Elongation factor G C-terminus YYU_RS02050 SM00937 YYU_RS02050 YYU_RS02060 SM00845 GatB domain YYU_RS02080 SM00382 ATPases associated with a variety of cellular activities YYU_RS02080 SM00760 Bacterial dnaA protein helix-turn-helix domain YYU_RS02095 SM00937 YYU_RS02095 YYU_RS02150 SM00382 ATPases associated with a variety of cellular activities YYU_RS02160 SM00116 Domain in cystathionine beta-synthase and other proteins. YYU_RS02160 SM00924 MgtE intracellular N domain YYU_RS02220 SM01409 YYU_RS02220 YYU_RS02260 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YYU_RS02345 SM00841 Elongation factor P, C-terminal YYU_RS02345 SM01185 YYU_RS02345 YYU_RS02355 SM00363 S4 RNA-binding domain YYU_RS02360 SM00267 diguanylate cyclase YYU_RS02360 SM00448 cheY-homologous receiver domain YYU_RS02385 SM00840 YYU_RS02385 YYU_RS02420 SM00400 zinc finger YYU_RS02420 SM00493 YYU_RS02420 YYU_RS02425 SM00534 ATPase domain of DNA mismatch repair MUTS family YYU_RS02460 SM00387 Histidine kinase-like ATPases YYU_RS02460 SM00388 His Kinase A (phosphoacceptor) domain YYU_RS02460 SM00448 cheY-homologous receiver domain YYU_RS02500 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YYU_RS02500 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YYU_RS02500 SM00493 YYU_RS02500 YYU_RS02590 SM00650 Ribosomal RNA adenine dimethylases YYU_RS02620 SM00905 Dihydroneopterin aldolase YYU_RS02780 SM00822 YYU_RS02780 YYU_RS02885 SM01192 YYU_RS02885 YYU_RS02885 SM01193 YYU_RS02885 YYU_RS02910 SM00836 DALR anticodon binding domain YYU_RS02910 SM01016 Arginyl tRNA synthetase N terminal dom YYU_RS02935 SM00248 ankyrin repeats YYU_RS02945 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YYU_RS02955 SM00387 Histidine kinase-like ATPases YYU_RS02955 SM00433 TopoisomeraseII YYU_RS03000 SM00479 YYU_RS03000 YYU_RS03045 SM00248 ankyrin repeats YYU_RS03085 SM00382 ATPases associated with a variety of cellular activities YYU_RS03110 SM00838 Elongation factor G C-terminus YYU_RS03120 SM00316 Ribosomal protein S1-like RNA-binding domain YYU_RS03120 SM00322 K homology RNA-binding domain YYU_RS03125 SM01387 YYU_RS03125 YYU_RS03175 SM00382 ATPases associated with a variety of cellular activities YYU_RS03180 SM00411 bacterial (prokaryotic) histone like domain YYU_RS03400 SM01004 Delta-aminolevulinic acid dehydratase YYU_RS03420 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YYU_RS03420 SM00534 ATPase domain of DNA mismatch repair MUTS family YYU_RS03440 SM00861 Transketolase, pyrimidine binding domain YYU_RS03450 SM00998 Adenylosuccinate lyase C-terminus YYU_RS03490 SM00729 Elongator protein 3, MiaB family, Radical SAM YYU_RS03515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YYU_RS03515 SM00465 GIY-YIG type nucleases (URI domain) YYU_RS03520 SM00387 Histidine kinase-like ATPases YYU_RS03540 SM00478 endonuclease III YYU_RS03540 SM00525 YYU_RS03540 YYU_RS03545 SM00434 DNA Topoisomerase IV YYU_RS03665 SM00248 ankyrin repeats YYU_RS03675 SM00825 Beta-ketoacyl synthase YYU_RS03710 SM00853 MutL C terminal dimerisation domain YYU_RS03710 SM01340 YYU_RS03710 YYU_RS03730 SM00387 Histidine kinase-like ATPases YYU_RS03730 SM00388 His Kinase A (phosphoacceptor) domain YYU_RS03765 SM01091 Transporter associated domain YYU_RS03780 SM00450 Rhodanese Homology Domain YYU_RS03805 SM00382 ATPases associated with a variety of cellular activities YYU_RS03805 SM00464 Found in ATP-dependent protease La (LON) YYU_RS03810 SM00382 ATPases associated with a variety of cellular activities YYU_RS03810 SM00994 ClpX C4-type zinc finger YYU_RS03810 SM01086 C-terminal, D2-small domain, of ClpB protein YYU_RS03875 SM00382 ATPases associated with a variety of cellular activities YYU_RS03890 SM00382 ATPases associated with a variety of cellular activities YYU_RS03900 SM00493 YYU_RS03900 YYU_RS03905 SM00363 S4 RNA-binding domain YYU_RS03905 SM01390 YYU_RS03905 YYU_RS03960 SM00481 DNA polymerase alpha chain like domain YYU_RS04040 SM00663 RNA polymerase I subunit A N-terminus YYU_RS04065 SM00649 Ribosomal protein L11/L12 YYU_RS04070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YYU_RS04090 SM00838 Elongation factor G C-terminus YYU_RS04090 SM00889 Elongation factor G, domain IV YYU_RS04105 SM00849 Metallo-beta-lactamase superfamily YYU_RS04165 SM00881 CoA binding domain YYU_RS04180 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YYU_RS04190 SM01230 YYU_RS04190 YYU_RS04195 SM00849 Metallo-beta-lactamase superfamily YYU_RS04235 SM00357 Cold shock protein domain YYU_RS04235 SM00382 ATPases associated with a variety of cellular activities YYU_RS04235 SM00959 Rho termination factor, N-terminal domain YYU_RS04245 SM00382 ATPases associated with a variety of cellular activities YYU_RS04245 SM01086 C-terminal, D2-small domain, of ClpB protein YYU_RS04310 SM01209 YYU_RS04310 YYU_RS04310 SM01210 YYU_RS04310 YYU_RS04315 SM01323 YYU_RS04315 YYU_RS04335 SM00480 DNA polymerase III beta subunit YYU_RS04340 SM00474 3'-5' exonuclease YYU_RS04345 SM00448 cheY-homologous receiver domain YYU_RS04345 SM00862 Transcriptional regulatory protein, C terminal YYU_RS04350 SM00530 Helix-turn-helix XRE-family like proteins YYU_RS04400 SM01400 YYU_RS04400 YYU_RS04550 SM00244 prohibitin homologues YYU_RS04555 SM00244 prohibitin homologues YYU_RS04560 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YYU_RS04565 SM00358 Double-stranded RNA binding motif YYU_RS04565 SM00535 Ribonuclease III family YYU_RS04625 SM00904 Riboflavin kinase YYU_RS04640 SM00842 Cell division protein FtsA YYU_RS04650 SM01329 YYU_RS04650 YYU_RS04700 SM00957 SecA DEAD-like domain YYU_RS04700 SM00958 SecA preprotein cross-linking domain YYU_RS04705 SM00382 ATPases associated with a variety of cellular activities YYU_RS04725 SM00842 Cell division protein FtsA YYU_RS04820 SM00798 AICARFT/IMPCHase bienzyme YYU_RS04820 SM00851 MGS-like domain YYU_RS04830 SM00935 Outer membrane protein (OmpH-like) YYU_RS04840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YYU_RS04855 SM00936 Penicillin-binding protein 5, C-terminal domain YYU_RS04870 SM00562 YYU_RS04870 YYU_RS04875 SM00530 Helix-turn-helix XRE-family like proteins YYU_RS04915 SM00382 ATPases associated with a variety of cellular activities YYU_RS04915 SM00962 SRP54-type protein, GTPase domain YYU_RS04915 SM00963 SRP54-type protein, helical bundle domain YYU_RS05000 SM01230 YYU_RS05000 YYU_RS05045 SM01133 YYU_RS05045 YYU_RS05065 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YYU_RS05135 SM01001 AIR carboxylase YYU_RS05145 SM00411 bacterial (prokaryotic) histone like domain YYU_RS05185 SM00864 Tubulin/FtsZ family, GTPase domain YYU_RS05185 SM00865 Tubulin/FtsZ family, C-terminal domain YYU_RS05210 SM00487 DEAD-like helicases superfamily YYU_RS05210 SM00490 helicase superfamily c-terminal domain YYU_RS05255 SM00861 Transketolase, pyrimidine binding domain YYU_RS05300 SM00028 Tetratricopeptide repeats YYU_RS05430 SM00859 Semialdehyde dehydrogenase, NAD binding domain YYU_RS05440 SM00382 ATPases associated with a variety of cellular activities YYU_RS05445 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YYU_RS05465 SM00382 ATPases associated with a variety of cellular activities YYU_RS05505 SM00487 DEAD-like helicases superfamily YYU_RS05505 SM00490 helicase superfamily c-terminal domain YYU_RS05520 SM00986 Uracil DNA glycosylase superfamily YYU_RS05520 SM00987 UreE urease accessory protein, C-terminal domain YYU_RS05530 SM00563 Phosphate acyltransferases YYU_RS05715 SM00248 ankyrin repeats YYU_RS05745 SM01323 YYU_RS05745 YYU_RS05825 SM00843 YYU_RS05825