locus-tag class description AF2641_RS00005 PF13361 UvrD-like helicase C-terminal domain AF2641_RS00005 PF12705 PD-(D/E)XK nuclease superfamily AF2641_RS00040 PF00672 HAMP domain AF2641_RS00040 PF02743 Cache domain AF2641_RS00040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS00045 PF00563 EAL domain AF2641_RS00045 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS00045 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS00050 PF00005 ABC transporter AF2641_RS00055 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS00065 PF00501 AMP-binding enzyme AF2641_RS00065 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS00120 PF05593 RHS Repeat AF2641_RS00135 PF05593 RHS Repeat AF2641_RS00145 PF05593 RHS Repeat AF2641_RS00175 PF00571 CBS domain AF2641_RS00175 PF01743 Poly A polymerase head domain AF2641_RS00180 PF00474 Sodium:solute symporter family AF2641_RS00195 PF12706 Beta-lactamase superfamily domain AF2641_RS00200 PF14149 YhfH-like protein AF2641_RS00205 PF00128 Alpha amylase, catalytic domain AF2641_RS00210 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00220 PF01547 Bacterial extracellular solute-binding protein AF2641_RS00225 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS00235 PF17932 Tetracyclin repressor-like, C-terminal domain AF2641_RS00235 PF00440 Bacterial regulatory proteins, tetR family AF2641_RS00240 PF01593 Flavin containing amine oxidoreductase AF2641_RS00245 PF00762 Ferrochelatase AF2641_RS00250 PF01208 Uroporphyrinogen decarboxylase (URO-D) AF2641_RS00255 PF03992 Antibiotic biosynthesis monooxygenase AF2641_RS00260 PF00581 Rhodanese-like domain AF2641_RS00265 PF01546 Peptidase family M20/M25/M40 AF2641_RS00265 PF07687 Peptidase dimerisation domain AF2641_RS00275 PF00005 ABC transporter AF2641_RS00280 PF01230 HIT domain AF2641_RS00285 PF05698 Bacterial trigger factor protein (TF) C-terminus AF2641_RS00290 PF09680 Family of unknown function AF2641_RS00305 PF01047 MarR family AF2641_RS00320 PF17099 Tryptophan transporter TrpP AF2641_RS00325 PF00266 Aminotransferase class-V AF2641_RS00330 PF14147 Sporulation protein YhaL AF2641_RS00335 PF14120 YhzD-like protein AF2641_RS00340 PF04055 Radical SAM superfamily AF2641_RS00350 PF06133 Control of competence regulator ComK, YlbF/YmcA AF2641_RS00355 PF04286 Protein of unknown function (DUF445) AF2641_RS00365 PF13556 PucR C-terminal helix-turn-helix domain AF2641_RS00370 PF17912 MalK OB fold domain AF2641_RS00370 PF03459 TOBE domain AF2641_RS00370 PF00005 ABC transporter AF2641_RS00380 PF00269 Small, acid-soluble spore proteins, alpha/beta type AF2641_RS00385 PF00005 ABC transporter AF2641_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00395 PF00497 Bacterial extracellular solute-binding proteins, family 3 AF2641_RS00400 PF00571 CBS domain AF2641_RS00400 PF01595 Cyclin M transmembrane N-terminal domain AF2641_RS00400 PF03471 Transporter associated domain AF2641_RS00405 PF08543 Phosphomethylpyrimidine kinase AF2641_RS00410 PF00899 ThiF family AF2641_RS00415 PF05690 Thiazole biosynthesis protein ThiG AF2641_RS00420 PF05690 Thiazole biosynthesis protein ThiG AF2641_RS00420 PF02597 ThiS family AF2641_RS00425 PF01266 FAD dependent oxidoreductase AF2641_RS00430 PF02581 Thiamine monophosphate synthase AF2641_RS00435 PF02361 Cobalt transport protein AF2641_RS00440 PF00005 ABC transporter AF2641_RS00445 PF09819 ABC-type cobalt transport system, permease component AF2641_RS00450 PF03070 TENA/THI-4/PQQC family AF2641_RS00455 PF17785 PUA-like domain AF2641_RS00455 PF10672 S-adenosylmethionine-dependent methyltransferase AF2641_RS00465 PF16657 Maltogenic Amylase, C-terminal domain AF2641_RS00465 PF00128 Alpha amylase, catalytic domain AF2641_RS00470 PF07690 Major Facilitator Superfamily AF2641_RS00475 PF01047 MarR family AF2641_RS00480 PF04293 SpoVR like protein AF2641_RS00485 PF01145 SPFH domain / Band 7 family AF2641_RS00485 PF12221 Bacterial membrane protein N terminal AF2641_RS00490 PF01145 SPFH domain / Band 7 family AF2641_RS00495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AF2641_RS00495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AF2641_RS00500 PF14148 YhdB-like protein AF2641_RS00505 PF00106 short chain dehydrogenase AF2641_RS00510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AF2641_RS00510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AF2641_RS00510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AF2641_RS00510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AF2641_RS00515 PF00571 CBS domain AF2641_RS00520 PF02600 Disulfide bond formation protein DsbB AF2641_RS00525 PF00085 Thioredoxin AF2641_RS00535 PF00849 RNA pseudouridylate synthase AF2641_RS00535 PF01479 S4 domain AF2641_RS00540 PF00571 CBS domain AF2641_RS00540 PF03471 Transporter associated domain AF2641_RS00540 PF01595 Cyclin M transmembrane N-terminal domain AF2641_RS00545 PF04298 Putative neutral zinc metallopeptidase AF2641_RS00550 PF00581 Rhodanese-like domain AF2641_RS00550 PF00753 Metallo-beta-lactamase superfamily AF2641_RS00560 PF01925 Sulfite exporter TauE/SafE AF2641_RS00565 PF01206 Sulfurtransferase TusA AF2641_RS00570 PF13686 DsrE/DsrF/DrsH-like family AF2641_RS00575 PF00581 Rhodanese-like domain AF2641_RS00575 PF01206 Sulfurtransferase TusA AF2641_RS00580 PF00581 Rhodanese-like domain AF2641_RS00585 PF04285 Protein of unknown function (DUF444) AF2641_RS00590 PF06798 PrkA serine protein kinase C-terminal domain AF2641_RS00590 PF08298 PrkA AAA domain AF2641_RS00595 PF00588 SpoU rRNA Methylase family AF2641_RS00600 PF12671 Putative amidase domain AF2641_RS00605 PF08331 Domain of unknown function (DUF1730) AF2641_RS00620 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00635 PF13416 Bacterial extracellular solute-binding protein AF2641_RS00640 PF00232 Glycosyl hydrolase family 1 AF2641_RS00740 PF18576 Helix-turn-helix domain AF2641_RS00740 PF14540 Nucleotidyltransferase-like AF2641_RS00745 PF11023 Zinc-ribbon containing domain AF2641_RS00750 PF01475 Ferric uptake regulator family AF2641_RS00755 PF00578 AhpC/TSA family AF2641_RS00760 PF07885 Ion channel AF2641_RS00770 PF00005 ABC transporter AF2641_RS00775 PF00202 Aminotransferase class-III AF2641_RS00780 PF01493 GXGXG motif AF2641_RS00780 PF00310 Glutamine amidotransferases class-II AF2641_RS00780 PF01645 Conserved region in glutamate synthase AF2641_RS00780 PF04898 Glutamate synthase central domain AF2641_RS00785 PF06081 Aromatic acid exporter family member 1 AF2641_RS00790 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00790 PF12911 N-terminal TM domain of oligopeptide transport permease C AF2641_RS00795 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS00800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AF2641_RS00805 PF00005 ABC transporter AF2641_RS00805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AF2641_RS00810 PF00005 ABC transporter AF2641_RS00810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AF2641_RS00815 PF04167 Protein of unknown function (DUF402) AF2641_RS00830 PF00633 Helix-hairpin-helix motif AF2641_RS00830 PF00730 HhH-GPD superfamily base excision DNA repair protein AF2641_RS00830 PF14815 NUDIX domain AF2641_RS00835 PF04307 LexA-binding, inner membrane-associated putative hydrolase AF2641_RS00840 PF08176 Small acid-soluble spore protein K family AF2641_RS00850 PF08838 Protein of unknown function (DUF1811) AF2641_RS00855 PF02652 L-lactate permease AF2641_RS00860 PF00106 short chain dehydrogenase AF2641_RS00865 PF02631 RecX family AF2641_RS00870 PF01370 NAD dependent epimerase/dehydratase family AF2641_RS00870 PF08338 Domain of unknown function (DUF1731) AF2641_RS00875 PF01979 Amidohydrolase family AF2641_RS00895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS00895 PF00672 HAMP domain AF2641_RS00895 PF12729 Four helix bundle sensory module for signal transduction AF2641_RS00900 PF08240 Alcohol dehydrogenase GroES-like domain AF2641_RS00900 PF00107 Zinc-binding dehydrogenase AF2641_RS00925 PF14398 YheC/D like ATP-grasp AF2641_RS00930 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AF2641_RS00940 PF00293 NUDIX domain AF2641_RS00945 PF05958 tRNA (Uracil-5-)-methyltransferase AF2641_RS00945 PF01938 TRAM domain AF2641_RS00950 PF00730 HhH-GPD superfamily base excision DNA repair protein AF2641_RS00955 PF01522 Polysaccharide deacetylase AF2641_RS00960 PF05681 Fumarate hydratase (Fumerase) AF2641_RS00960 PF05683 Fumarase C-terminus AF2641_RS00970 PF04055 Radical SAM superfamily AF2641_RS00970 PF08756 YfkB-like domain AF2641_RS00975 PF14167 YfkD-like protein AF2641_RS00980 PF01699 Sodium/calcium exchanger protein AF2641_RS00985 PF07690 Major Facilitator Superfamily AF2641_RS00995 PF03631 Virulence factor BrkB AF2641_RS01005 PF01451 Low molecular weight phosphotyrosine protein phosphatase AF2641_RS01010 PF06569 Protein of unknown function (DUF1128) AF2641_RS01020 PF01507 Phosphoadenosine phosphosulfate reductase family AF2641_RS01025 PF01384 Phosphate transporter family AF2641_RS01030 PF14306 PUA-like domain AF2641_RS01030 PF01747 ATP-sulfurylase AF2641_RS01040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF2641_RS01045 PF01903 CbiX AF2641_RS01060 PF00708 Acylphosphatase AF2641_RS01070 PF17910 FeoB cytosolic helical domain AF2641_RS01070 PF02421 Ferrous iron transport protein B AF2641_RS01070 PF07664 Ferrous iron transport protein B C terminus AF2641_RS01070 PF07670 Nucleoside recognition AF2641_RS01085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF2641_RS01085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS01090 PF03741 Integral membrane protein TerC family AF2641_RS01095 PF01476 LysM domain AF2641_RS01095 PF00877 NlpC/P60 family AF2641_RS01100 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS01100 PF00563 EAL domain AF2641_RS01100 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS01105 PF00672 HAMP domain AF2641_RS01105 PF02743 Cache domain AF2641_RS01110 PF02898 Nitric oxide synthase, oxygenase domain AF2641_RS01125 PF08281 Sigma-70, region 4 AF2641_RS01125 PF04542 Sigma-70 region 2 AF2641_RS01150 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS01150 PF00989 PAS fold AF2641_RS01150 PF16736 Single Cache-like AF2641_RS01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS01155 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS01155 PF00072 Response regulator receiver domain AF2641_RS01160 PF01061 ABC-2 type transporter AF2641_RS01165 PF00005 ABC transporter AF2641_RS01165 PF13732 Domain of unknown function (DUF4162) AF2641_RS01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS01185 PF13426 PAS domain AF2641_RS01185 PF08447 PAS fold AF2641_RS01195 PF07690 Major Facilitator Superfamily AF2641_RS01200 PF01938 TRAM domain AF2641_RS01200 PF05958 tRNA (Uracil-5-)-methyltransferase AF2641_RS01200 PF02475 Met-10+ like-protein AF2641_RS01205 PF00781 Diacylglycerol kinase catalytic domain AF2641_RS01220 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS01220 PF00072 Response regulator receiver domain AF2641_RS01225 PF00989 PAS fold AF2641_RS01225 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS01225 PF18698 Histidine kinase sensor domain AF2641_RS01225 PF00672 HAMP domain AF2641_RS01235 PF04012 PspA/IM30 family AF2641_RS01250 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AF2641_RS01255 PF00510 Cytochrome c oxidase subunit III AF2641_RS01260 PF00115 Cytochrome C and Quinol oxidase polypeptide I AF2641_RS01265 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AF2641_RS01270 PF00171 Aldehyde dehydrogenase family AF2641_RS01320 PF01609 Transposase DDE domain AF2641_RS01330 PF03591 AzlC protein AF2641_RS01340 PF00072 Response regulator receiver domain AF2641_RS01340 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS01350 PF02637 GatB domain AF2641_RS01350 PF02934 GatB/GatE catalytic domain AF2641_RS01355 PF01425 Amidase AF2641_RS01360 PF02686 Glu-tRNAGln amidotransferase C subunit AF2641_RS01365 PF01235 Sodium:alanine symporter family AF2641_RS01370 PF13382 Adenine deaminase C-terminal domain AF2641_RS01370 PF01979 Amidohydrolase family AF2641_RS01405 PF00171 Aldehyde dehydrogenase family AF2641_RS01410 PF07537 CamS sex pheromone cAM373 precursor AF2641_RS01415 PF00533 BRCA1 C Terminus (BRCT) domain AF2641_RS01415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AF2641_RS01415 PF03120 NAD-dependent DNA ligase OB-fold domain AF2641_RS01415 PF01653 NAD-dependent DNA ligase adenylation domain AF2641_RS01415 PF12826 Helix-hairpin-helix motif AF2641_RS01420 PF00580 UvrD/REP helicase N-terminal domain AF2641_RS01420 PF13361 UvrD-like helicase C-terminal domain AF2641_RS01425 PF01884 PcrB family AF2641_RS01430 PF01371 Trp repressor protein AF2641_RS01435 PF11258 Protein of unknown function (DUF3048) N-terminal domain AF2641_RS01435 PF17479 Protein of unknown function (DUF3048) C-terminal domain AF2641_RS01440 PF01979 Amidohydrolase family AF2641_RS01440 PF13382 Adenine deaminase C-terminal domain AF2641_RS01450 PF02843 Phosphoribosylglycinamide synthetase, C domain AF2641_RS01450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AF2641_RS01450 PF02844 Phosphoribosylglycinamide synthetase, N domain AF2641_RS01455 PF02142 MGS-like domain AF2641_RS01455 PF01808 AICARFT/IMPCHase bienzyme AF2641_RS01460 PF00551 Formyl transferase AF2641_RS01465 PF00586 AIR synthase related protein, N-terminal domain AF2641_RS01465 PF02769 AIR synthase related protein, C-terminal domain AF2641_RS01470 PF00156 Phosphoribosyl transferase domain AF2641_RS01485 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AF2641_RS01490 PF01259 SAICAR synthetase AF2641_RS01495 PF10397 Adenylosuccinate lyase C-terminus AF2641_RS01495 PF00206 Lyase AF2641_RS01500 PF02222 ATP-grasp domain AF2641_RS01500 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AF2641_RS01505 PF00731 AIR carboxylase AF2641_RS01510 PF00011 Hsp20/alpha crystallin family AF2641_RS01530 PF00860 Permease family AF2641_RS01535 PF00117 Glutamine amidotransferase class-I AF2641_RS01535 PF02540 NAD synthase AF2641_RS01535 PF00958 GMP synthase C terminal domain AF2641_RS01545 PF00583 Acetyltransferase (GNAT) family AF2641_RS01545 PF14698 Argininosuccinate lyase C-terminal AF2641_RS01545 PF00206 Lyase AF2641_RS01550 PF07690 Major Facilitator Superfamily AF2641_RS01560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF2641_RS01560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF2641_RS01560 PF00205 Thiamine pyrophosphate enzyme, central domain AF2641_RS01570 PF00491 Arginase family AF2641_RS01575 PF02844 Phosphoribosylglycinamide synthetase, N domain AF2641_RS01575 PF02843 Phosphoribosylglycinamide synthetase, C domain AF2641_RS01575 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AF2641_RS01580 PF01960 ArgJ family AF2641_RS01585 PF00733 Asparagine synthase AF2641_RS01585 PF13537 Glutamine amidotransferase domain AF2641_RS01590 PF01609 Transposase DDE domain AF2641_RS01600 PF00118 TCP-1/cpn60 chaperonin family AF2641_RS01605 PF00166 Chaperonin 10 Kd subunit AF2641_RS01610 PF02517 CPBP intramembrane metalloprotease AF2641_RS01620 PF02629 CoA binding domain AF2641_RS01620 PF06971 Putative DNA-binding protein N-terminus AF2641_RS01625 PF12848 ABC transporter AF2641_RS01625 PF00005 ABC transporter AF2641_RS01625 PF16326 ABC transporter C-terminal domain AF2641_RS01635 PF00814 Glycoprotease family AF2641_RS01640 PF00583 Acetyltransferase (GNAT) family AF2641_RS01645 PF00814 Glycoprotease family AF2641_RS01650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AF2641_RS01695 PF05698 Bacterial trigger factor protein (TF) C-terminus AF2641_RS01695 PF05697 Bacterial trigger factor protein (TF) AF2641_RS01735 PF10263 SprT-like family AF2641_RS01745 PF00575 S1 RNA binding domain AF2641_RS01745 PF17674 HHH domain AF2641_RS01745 PF16921 Tex protein YqgF-like domain AF2641_RS01745 PF09371 Tex-like protein N-terminal domain AF2641_RS01750 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AF2641_RS01755 PF01402 Ribbon-helix-helix protein, copG family AF2641_RS01760 PF01168 Alanine racemase, N-terminal domain AF2641_RS01760 PF00842 Alanine racemase, C-terminal domain AF2641_RS01770 PF01648 4'-phosphopantetheinyl transferase superfamily AF2641_RS01775 PF00271 Helicase conserved C-terminal domain AF2641_RS01775 PF00270 DEAD/DEAH box helicase AF2641_RS01780 PF01225 Mur ligase family, catalytic domain AF2641_RS01780 PF02875 Mur ligase family, glutamate ligase domain AF2641_RS01780 PF08245 Mur ligase middle domain AF2641_RS01785 PF01820 D-ala D-ala ligase N-terminus AF2641_RS01785 PF07478 D-ala D-ala ligase C-terminus AF2641_RS01790 PF03845 Spore germination protein AF2641_RS01795 PF03323 Bacillus/Clostridium GerA spore germination protein AF2641_RS01805 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AF2641_RS01815 PF01522 Polysaccharide deacetylase AF2641_RS01820 PF01039 Carboxyl transferase domain AF2641_RS01825 PF00378 Enoyl-CoA hydratase/isomerase AF2641_RS01830 PF00682 HMGL-like AF2641_RS01835 PF00364 Biotin-requiring enzyme AF2641_RS01840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF2641_RS01840 PF00289 Biotin carboxylase, N-terminal domain AF2641_RS01840 PF02785 Biotin carboxylase C-terminal domain AF2641_RS01845 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS01845 PF00501 AMP-binding enzyme AF2641_RS01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS01850 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF2641_RS01860 PF13722 5TM C-terminal transporter carbon starvation CstA AF2641_RS01860 PF02554 Carbon starvation protein CstA AF2641_RS01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS01875 PF13411 MerR HTH family regulatory protein AF2641_RS01875 PF07739 TipAS antibiotic-recognition domain AF2641_RS01880 PF00196 Bacterial regulatory proteins, luxR family AF2641_RS01880 PF00072 Response regulator receiver domain AF2641_RS01885 PF07730 Histidine kinase AF2641_RS01885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS01910 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AF2641_RS01945 PF01553 Acyltransferase AF2641_RS01955 PF07690 Major Facilitator Superfamily AF2641_RS01960 PF00733 Asparagine synthase AF2641_RS01960 PF13537 Glutamine amidotransferase domain AF2641_RS01970 PF01717 Cobalamin-independent synthase, Catalytic domain AF2641_RS01970 PF08267 Cobalamin-independent synthase, N-terminal domain AF2641_RS02050 PF01380 SIS domain AF2641_RS02055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AF2641_RS02055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AF2641_RS02055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AF2641_RS02055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AF2641_RS02060 PF07949 YbbR-like protein AF2641_RS02065 PF02457 DisA bacterial checkpoint controller nucleotide-binding AF2641_RS02070 PF13490 Putative zinc-finger AF2641_RS02075 PF08281 Sigma-70, region 4 AF2641_RS02075 PF04542 Sigma-70 region 2 AF2641_RS02080 PF00491 Arginase family AF2641_RS02150 PF01522 Polysaccharide deacetylase AF2641_RS02155 PF14089 KinB-signalling pathway activation in sporulation AF2641_RS02160 PF17898 Spore germination GerD central core domain AF2641_RS02165 PF10609 NUBPL iron-transfer P-loop NTPase AF2641_RS02170 PF01520 N-acetylmuramoyl-L-alanine amidase AF2641_RS02180 PF00380 Ribosomal protein S9/S16 AF2641_RS02185 PF00572 Ribosomal protein L13 AF2641_RS02190 PF01416 tRNA pseudouridine synthase AF2641_RS02195 PF02361 Cobalt transport protein AF2641_RS02200 PF00005 ABC transporter AF2641_RS02205 PF00005 ABC transporter AF2641_RS02210 PF01196 Ribosomal protein L17 AF2641_RS02215 PF01000 RNA polymerase Rpb3/RpoA insert domain AF2641_RS02215 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AF2641_RS02215 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AF2641_RS02220 PF00411 Ribosomal protein S11 AF2641_RS02225 PF00416 Ribosomal protein S13/S18 AF2641_RS02230 PF00444 Ribosomal protein L36 AF2641_RS02235 PF01176 Translation initiation factor 1A / IF-1 AF2641_RS02240 PF00557 Metallopeptidase family M24 AF2641_RS02245 PF05191 Adenylate kinase, active site lid AF2641_RS02250 PF00344 SecY translocase AF2641_RS02255 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AF2641_RS02260 PF00327 Ribosomal protein L30p/L7e AF2641_RS02265 PF00333 Ribosomal protein S5, N-terminal domain AF2641_RS02265 PF03719 Ribosomal protein S5, C-terminal domain AF2641_RS02270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AF2641_RS02275 PF00347 Ribosomal protein L6 AF2641_RS02280 PF00410 Ribosomal protein S8 AF2641_RS02285 PF00253 Ribosomal protein S14p/S29e AF2641_RS02290 PF00281 Ribosomal protein L5 AF2641_RS02290 PF00673 ribosomal L5P family C-terminus AF2641_RS02295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AF2641_RS02295 PF00467 KOW motif AF2641_RS02300 PF00238 Ribosomal protein L14p/L23e AF2641_RS02305 PF00366 Ribosomal protein S17 AF2641_RS02310 PF00831 Ribosomal L29 protein AF2641_RS02315 PF00252 Ribosomal protein L16p/L10e AF2641_RS02320 PF07650 KH domain AF2641_RS02320 PF00189 Ribosomal protein S3, C-terminal domain AF2641_RS02325 PF00237 Ribosomal protein L22p/L17e AF2641_RS02330 PF00203 Ribosomal protein S19 AF2641_RS02335 PF03947 Ribosomal Proteins L2, C-terminal domain AF2641_RS02335 PF00181 Ribosomal Proteins L2, RNA binding domain AF2641_RS02340 PF00276 Ribosomal protein L23 AF2641_RS02345 PF00573 Ribosomal protein L4/L1 family AF2641_RS02350 PF00297 Ribosomal protein L3 AF2641_RS02355 PF00338 Ribosomal protein S10p/S20e AF2641_RS02365 PF03143 Elongation factor Tu C-terminal domain AF2641_RS02365 PF03144 Elongation factor Tu domain 2 AF2641_RS02365 PF00009 Elongation factor Tu GTP binding domain AF2641_RS02370 PF03144 Elongation factor Tu domain 2 AF2641_RS02370 PF00679 Elongation factor G C-terminus AF2641_RS02370 PF00009 Elongation factor Tu GTP binding domain AF2641_RS02370 PF14492 Elongation Factor G, domain II AF2641_RS02370 PF03764 Elongation factor G, domain IV AF2641_RS02375 PF00177 Ribosomal protein S7p/S5e AF2641_RS02380 PF00164 Ribosomal protein S12/S23 AF2641_RS02385 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AF2641_RS02390 PF00623 RNA polymerase Rpb1, domain 2 AF2641_RS02390 PF04998 RNA polymerase Rpb1, domain 5 AF2641_RS02390 PF05000 RNA polymerase Rpb1, domain 4 AF2641_RS02390 PF04983 RNA polymerase Rpb1, domain 3 AF2641_RS02390 PF04997 RNA polymerase Rpb1, domain 1 AF2641_RS02395 PF04560 RNA polymerase Rpb2, domain 7 AF2641_RS02395 PF04561 RNA polymerase Rpb2, domain 2 AF2641_RS02395 PF04565 RNA polymerase Rpb2, domain 3 AF2641_RS02395 PF04563 RNA polymerase beta subunit AF2641_RS02395 PF10385 RNA polymerase beta subunit external 1 domain AF2641_RS02395 PF00562 RNA polymerase Rpb2, domain 6 AF2641_RS02400 PF05175 Methyltransferase small domain AF2641_RS02405 PF16320 Ribosomal protein L7/L12 dimerisation domain AF2641_RS02405 PF00542 Ribosomal protein L7/L12 C-terminal domain AF2641_RS02410 PF00466 Ribosomal protein L10 AF2641_RS02415 PF00687 Ribosomal protein L1p/L10e family AF2641_RS02420 PF03946 Ribosomal protein L11, N-terminal domain AF2641_RS02420 PF00298 Ribosomal protein L11, RNA binding domain AF2641_RS02425 PF00467 KOW motif AF2641_RS02425 PF02357 Transcription termination factor nusG AF2641_RS02430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AF2641_RS02435 PF00471 Ribosomal protein L33 AF2641_RS02440 PF08281 Sigma-70, region 4 AF2641_RS02440 PF04542 Sigma-70 region 2 AF2641_RS02445 PF05991 YacP-like NYN domain AF2641_RS02450 PF00588 SpoU rRNA Methylase family AF2641_RS02450 PF08032 RNA 2'-O ribose methyltransferase substrate binding AF2641_RS02455 PF00636 Ribonuclease III domain AF2641_RS02460 PF09190 DALR domain AF2641_RS02460 PF01406 tRNA synthetases class I (C) catalytic domain AF2641_RS02465 PF06426 Serine acetyltransferase, N-terminal AF2641_RS02465 PF00132 Bacterial transferase hexapeptide (six repeats) AF2641_RS02470 PF00749 tRNA synthetases class I (E and Q), catalytic domain AF2641_RS02475 PF02542 YgbB family AF2641_RS02480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AF2641_RS02490 PF18073 Rubredoxin metal binding domain AF2641_RS02495 PF10431 C-terminal, D2-small domain, of ClpB protein AF2641_RS02495 PF02861 Clp amino terminal domain, pathogenicity island component AF2641_RS02495 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS02495 PF07724 AAA domain (Cdc48 subfamily) AF2641_RS02495 PF17871 AAA lid domain AF2641_RS02500 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AF2641_RS02505 PF02151 UvrB/uvrC motif AF2641_RS02510 PF17727 CtsR C-terminal dimerization domain AF2641_RS02510 PF05848 CtsR N-terminal HTH domain AF2641_RS02555 PF05698 Bacterial trigger factor protein (TF) C-terminus AF2641_RS02555 PF05697 Bacterial trigger factor protein (TF) AF2641_RS02580 PF00152 tRNA synthetases class II (D, K and N) AF2641_RS02580 PF01336 OB-fold nucleic acid binding domain AF2641_RS02585 PF01207 Dihydrouridine synthase (Dus) AF2641_RS02590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AF2641_RS02595 PF02152 Dihydroneopterin aldolase AF2641_RS02600 PF00809 Pterin binding enzyme AF2641_RS02605 PF01063 Amino-transferase class IV AF2641_RS02610 PF00117 Glutamine amidotransferase class-I AF2641_RS02615 PF04715 Anthranilate synthase component I, N terminal region AF2641_RS02615 PF00425 chorismate binding enzyme AF2641_RS02620 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS02625 PF01430 Hsp33 protein AF2641_RS02630 PF03309 Type III pantothenate kinase AF2641_RS02635 PF17862 AAA+ lid domain AF2641_RS02635 PF01434 Peptidase family M41 AF2641_RS02635 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS02635 PF06480 FtsH Extracellular AF2641_RS02640 PF00156 Phosphoribosyl transferase domain AF2641_RS02645 PF01171 PP-loop family AF2641_RS02645 PF11734 TilS substrate C-terminal domain AF2641_RS02645 PF09179 TilS substrate binding domain AF2641_RS02650 PF00069 Protein kinase domain AF2641_RS02655 PF00092 von Willebrand factor type A domain AF2641_RS02660 PF07228 Stage II sporulation protein E (SpoIIE) AF2641_RS02675 PF00575 S1 RNA binding domain AF2641_RS02685 PF09578 Spore cortex protein YabQ (Spore_YabQ) AF2641_RS02690 PF07873 YabP family AF2641_RS02695 PF01479 S4 domain AF2641_RS02700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF2641_RS02700 PF03819 MazG nucleotide pyrophosphohydrolase domain AF2641_RS02705 PF01943 Polysaccharide biosynthesis protein AF2641_RS02705 PF14667 Polysaccharide biosynthesis C-terminal domain AF2641_RS02710 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AF2641_RS02710 PF15714 Stage V sporulation protein T C-terminal, transcription factor AF2641_RS02715 PF02559 CarD-like/TRCF domain AF2641_RS02715 PF00270 DEAD/DEAH box helicase AF2641_RS02715 PF00271 Helicase conserved C-terminal domain AF2641_RS02715 PF03461 TRCF domain AF2641_RS02715 PF17757 UvrB interaction domain AF2641_RS02720 PF10955 Protein of unknown function (DUF2757) AF2641_RS02725 PF01195 Peptidyl-tRNA hydrolase AF2641_RS02730 PF01386 Ribosomal L25p family AF2641_RS02730 PF14693 Ribosomal protein TL5, C-terminal domain AF2641_RS02735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AF2641_RS02735 PF14572 Phosphoribosyl synthetase-associated domain AF2641_RS02740 PF00132 Bacterial transferase hexapeptide (six repeats) AF2641_RS02740 PF00483 Nucleotidyl transferase AF2641_RS02745 PF04026 SpoVG AF2641_RS02750 PF01042 Endoribonuclease L-PSP AF2641_RS02755 PF09182 Bacterial purine repressor, N-terminal AF2641_RS02755 PF00156 Phosphoribosyl transferase domain AF2641_RS02760 PF00288 GHMP kinases N terminal domain AF2641_RS02760 PF08544 GHMP kinases C terminal AF2641_RS02765 PF06257 Biofilm formation stimulator VEG AF2641_RS02770 PF05582 YabG peptidase U57 AF2641_RS02775 PF00398 Ribosomal RNA adenine dimethylase AF2641_RS02780 PF13662 Toprim domain AF2641_RS02780 PF13331 Domain of unknown function (DUF4093) AF2641_RS02785 PF06725 3D domain AF2641_RS02785 PF03990 G5-linked-Ubiquitin-like domain AF2641_RS02785 PF07501 G5 domain AF2641_RS02790 PF01609 Transposase DDE domain AF2641_RS02795 PF07501 G5 domain AF2641_RS02795 PF06725 3D domain AF2641_RS02795 PF03990 G5-linked-Ubiquitin-like domain AF2641_RS02800 PF01026 TatD related DNase AF2641_RS02805 PF09334 tRNA synthetases class I (M) AF2641_RS02805 PF08264 Anticodon-binding domain of tRNA AF2641_RS02805 PF01588 Putative tRNA binding domain AF2641_RS02810 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AF2641_RS02810 PF18277 AbrB C-terminal domain AF2641_RS02815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AF2641_RS02820 PF05175 Methyltransferase small domain AF2641_RS02825 PF06156 Initiation control protein YabA AF2641_RS02830 PF04468 PSP1 C-terminal conserved region AF2641_RS02835 PF09115 DNA polymerase III, delta subunit, C terminal AF2641_RS02840 PF02223 Thymidylate kinase AF2641_RS02845 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AF2641_RS02845 PF01276 Orn/Lys/Arg decarboxylase, major domain AF2641_RS02850 PF10764 Inhibitor of sigma-G Gin AF2641_RS02880 PF07441 SigmaK-factor processing regulatory protein BofA AF2641_RS02885 PF10704 Protein of unknown function (DUF2508) AF2641_RS02890 PF02132 RecR protein AF2641_RS02890 PF13662 Toprim domain AF2641_RS02895 PF02575 YbaB/EbfC DNA-binding family AF2641_RS02900 PF12169 DNA polymerase III subunits gamma and tau domain III AF2641_RS02910 PF14437 MafB19-like deaminase AF2641_RS02915 PF01712 Deoxynucleoside kinase AF2641_RS02920 PF01712 Deoxynucleoside kinase AF2641_RS02930 PF02403 Seryl-tRNA synthetase N-terminal domain AF2641_RS02930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF2641_RS02935 PF01174 SNO glutamine amidotransferase family AF2641_RS02940 PF01680 SOR/SNZ family AF2641_RS02945 PF00768 D-alanyl-D-alanine carboxypeptidase AF2641_RS02945 PF07943 Penicillin-binding protein 5, C-terminal domain AF2641_RS02950 PF00478 IMP dehydrogenase / GMP reductase domain AF2641_RS02950 PF00571 CBS domain AF2641_RS02955 PF14175 YaaC-like Protein AF2641_RS02985 PF00072 Response regulator receiver domain AF2641_RS02990 PF03989 DNA gyrase C-terminal domain, beta-propeller AF2641_RS02990 PF00521 DNA gyrase/topoisomerase IV, subunit A AF2641_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS02995 PF00986 DNA gyrase B subunit, carboxyl terminus AF2641_RS02995 PF01751 Toprim domain AF2641_RS02995 PF00204 DNA gyrase B AF2641_RS03000 PF02463 RecF/RecN/SMC N terminal domain AF2641_RS03010 PF02767 DNA polymerase III beta subunit, central domain AF2641_RS03010 PF00712 DNA polymerase III beta subunit, N-terminal domain AF2641_RS03010 PF02768 DNA polymerase III beta subunit, C-terminal domain AF2641_RS03015 PF00308 Bacterial dnaA protein AF2641_RS03015 PF08299 Bacterial dnaA protein helix-turn-helix AF2641_RS03015 PF11638 DnaA N-terminal domain AF2641_RS03020 PF00468 Ribosomal protein L34 AF2641_RS03025 PF00825 Ribonuclease P AF2641_RS03030 PF02096 60Kd inner membrane protein AF2641_RS03035 PF01424 R3H domain AF2641_RS03035 PF14804 Jag N-terminus AF2641_RS03040 PF01926 50S ribosome-binding GTPase AF2641_RS03040 PF12631 MnmE helical domain AF2641_RS03040 PF10396 GTP-binding protein TrmE N-terminus AF2641_RS03045 PF01134 Glucose inhibited division protein A AF2641_RS03045 PF13932 GidA associated domain AF2641_RS03050 PF02527 rRNA small subunit methyltransferase G AF2641_RS03055 PF17762 HTH domain found in ParB protein AF2641_RS03055 PF02195 ParB-like nuclease domain AF2641_RS03060 PF13614 AAA domain AF2641_RS03065 PF17762 HTH domain found in ParB protein AF2641_RS03065 PF02195 ParB-like nuclease domain AF2641_RS03070 PF04474 Protein of unknown function (DUF554) AF2641_RS03080 PF00924 Mechanosensitive ion channel AF2641_RS03085 PF06107 Bacterial protein of unknown function (DUF951) AF2641_RS03090 PF01926 50S ribosome-binding GTPase AF2641_RS03090 PF06071 Protein of unknown function (DUF933) AF2641_RS03095 PF01250 Ribosomal protein S6 AF2641_RS03100 PF00436 Single-strand binding protein family AF2641_RS03105 PF01084 Ribosomal protein S18 AF2641_RS03110 PF09991 Predicted membrane protein (DUF2232) AF2641_RS03115 PF01368 DHH family AF2641_RS03115 PF02272 DHHA1 domain AF2641_RS03120 PF01281 Ribosomal protein L9, N-terminal domain AF2641_RS03120 PF03948 Ribosomal protein L9, C-terminal domain AF2641_RS03125 PF00772 DnaB-like helicase N terminal domain AF2641_RS03125 PF03796 DnaB-like helicase C terminal domain AF2641_RS03130 PF00709 Adenylosuccinate synthetase AF2641_RS03145 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS03145 PF00072 Response regulator receiver domain AF2641_RS03150 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS03150 PF13426 PAS domain AF2641_RS03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS03150 PF00672 HAMP domain AF2641_RS03160 PF09648 YycH protein AF2641_RS03165 PF00753 Metallo-beta-lactamase superfamily AF2641_RS03170 PF13180 PDZ domain AF2641_RS03180 PF02590 Predicted SPOUT methyltransferase AF2641_RS03185 PF00854 POT family AF2641_RS03190 PF13416 Bacterial extracellular solute-binding protein AF2641_RS03195 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS03205 PF08402 TOBE domain AF2641_RS03205 PF00005 ABC transporter AF2641_RS03215 PF03845 Spore germination protein AF2641_RS03220 PF03323 Bacillus/Clostridium GerA spore germination protein AF2641_RS03225 PF01266 FAD dependent oxidoreductase AF2641_RS03225 PF00355 Rieske [2Fe-2S] domain AF2641_RS03240 PF00171 Aldehyde dehydrogenase family AF2641_RS03240 PF00465 Iron-containing alcohol dehydrogenase AF2641_RS03250 PF04073 Aminoacyl-tRNA editing domain AF2641_RS03255 PF00588 SpoU rRNA Methylase family AF2641_RS03255 PF12105 SpoU, rRNA methylase, C-terminal AF2641_RS03260 PF13419 Haloacid dehalogenase-like hydrolase AF2641_RS03265 PF04055 Radical SAM superfamily AF2641_RS03270 PF01228 Glycine radical AF2641_RS03270 PF02901 Pyruvate formate lyase-like AF2641_RS03275 PF00497 Bacterial extracellular solute-binding proteins, family 3 AF2641_RS03280 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS03285 PF00005 ABC transporter AF2641_RS03290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AF2641_RS03290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AF2641_RS03295 PF13556 PucR C-terminal helix-turn-helix domain AF2641_RS03295 PF17853 GGDEF-like domain AF2641_RS03295 PF06018 CodY GAF-like domain AF2641_RS03300 PF00294 pfkB family carbohydrate kinase AF2641_RS03305 PF04198 Putative sugar-binding domain AF2641_RS03310 PF01773 Na+ dependent nucleoside transporter N-terminus AF2641_RS03310 PF07662 Na+ dependent nucleoside transporter C-terminus AF2641_RS03315 PF01791 DeoC/LacD family aldolase AF2641_RS03325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AF2641_RS03335 PF07282 Putative transposase DNA-binding domain AF2641_RS03335 PF01385 Probable transposase AF2641_RS03335 PF12323 Helix-turn-helix domain AF2641_RS03340 PF07690 Major Facilitator Superfamily AF2641_RS03345 PF00535 Glycosyl transferase family 2 AF2641_RS03355 PF00578 AhpC/TSA family AF2641_RS03355 PF10417 C-terminal domain of 1-Cys peroxiredoxin AF2641_RS03360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS03360 PF13192 Thioredoxin domain AF2641_RS03365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF2641_RS03365 PF03129 Anticodon binding domain AF2641_RS03370 PF03167 Uracil DNA glycosylase superfamily AF2641_RS03380 PF00999 Sodium/hydrogen exchanger family AF2641_RS03380 PF02254 TrkA-N domain AF2641_RS03385 PF00128 Alpha amylase, catalytic domain AF2641_RS03390 PF17261 Family of unknown function (DUF5327) AF2641_RS03395 PF04241 Protein of unknown function (DUF423) AF2641_RS03400 PF09671 Spore coat protein (Spore_GerQ) AF2641_RS03405 PF07486 Cell Wall Hydrolase AF2641_RS03410 PF06778 Chlorite dismutase AF2641_RS03415 PF09335 SNARE associated Golgi protein AF2641_RS03420 PF01515 Phosphate acetyl/butaryl transferase AF2641_RS03425 PF03099 Biotin/lipoate A/B protein ligase family AF2641_RS03435 PF07293 Protein of unknown function (DUF1450) AF2641_RS03440 PF01966 HD domain AF2641_RS03450 PF01361 Tautomerase enzyme AF2641_RS03455 PF02163 Peptidase family M50 AF2641_RS03460 PF08741 YwhD family AF2641_RS03465 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS03465 PF00912 Transglycosylase AF2641_RS03470 PF17284 Spermidine synthase tetramerisation domain AF2641_RS03475 PF00491 Arginase family AF2641_RS03490 PF03485 Arginyl tRNA synthetase N terminal domain AF2641_RS03490 PF05746 DALR anticodon binding domain AF2641_RS03490 PF00750 tRNA synthetases class I (R) AF2641_RS03495 PF13091 PLD-like domain AF2641_RS03500 PF13183 4Fe-4S dicluster domain AF2641_RS03500 PF02754 Cysteine-rich domain AF2641_RS03505 PF00108 Thiolase, N-terminal domain AF2641_RS03505 PF02803 Thiolase, C-terminal domain AF2641_RS03510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF2641_RS03510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF2641_RS03515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF2641_RS03515 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS03515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS03520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS03520 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS03520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF2641_RS03530 PF02310 B12 binding domain AF2641_RS03530 PF01642 Methylmalonyl-CoA mutase AF2641_RS03535 PF05066 HB1, ASXL, restriction endonuclease HTH domain AF2641_RS03540 PF00117 Glutamine amidotransferase class-I AF2641_RS03540 PF06418 CTP synthase N-terminus AF2641_RS03545 PF10740 Domain of unknown function (DUF2529) AF2641_RS03550 PF00072 Response regulator receiver domain AF2641_RS03555 PF01116 Fructose-bisphosphate aldolase class-II AF2641_RS03560 PF00923 Transaldolase/Fructose-6-phosphate aldolase AF2641_RS03565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AF2641_RS03570 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AF2641_RS03575 PF07497 Rho termination factor, RNA-binding domain AF2641_RS03575 PF07498 Rho termination factor, N-terminal domain AF2641_RS03575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AF2641_RS03580 PF01197 Ribosomal protein L31 AF2641_RS03585 PF00265 Thymidine kinase AF2641_RS03590 PF03462 PCRF domain AF2641_RS03590 PF00472 RF-1 domain AF2641_RS03595 PF17827 PrmC N-terminal domain AF2641_RS03595 PF13847 Methyltransferase domain AF2641_RS03600 PF09551 Stage II sporulation protein R (spore_II_R) AF2641_RS03605 PF01300 Telomere recombination AF2641_RS03605 PF03481 Putative GTP-binding controlling metal-binding AF2641_RS03610 PF02659 Putative manganese efflux pump AF2641_RS03615 PF01451 Low molecular weight phosphotyrosine protein phosphatase AF2641_RS03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS03620 PF00672 HAMP domain AF2641_RS03620 PF02743 Cache domain AF2641_RS03625 PF02502 Ribose/Galactose Isomerase AF2641_RS03630 PF04260 Protein of unknown function (DUF436) AF2641_RS03635 PF00464 Serine hydroxymethyltransferase AF2641_RS03645 PF02350 UDP-N-acetylglucosamine 2-epimerase AF2641_RS03655 PF03899 ATP synthase I chain AF2641_RS03660 PF00119 ATP synthase A chain AF2641_RS03665 PF00137 ATP synthase subunit C AF2641_RS03670 PF00430 ATP synthase B/B' CF(0) AF2641_RS03675 PF00213 ATP synthase delta (OSCP) subunit AF2641_RS03680 PF02874 ATP synthase alpha/beta family, beta-barrel domain AF2641_RS03680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AF2641_RS03680 PF00306 ATP synthase alpha/beta chain, C terminal domain AF2641_RS03685 PF00231 ATP synthase AF2641_RS03690 PF02874 ATP synthase alpha/beta family, beta-barrel domain AF2641_RS03690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AF2641_RS03695 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AF2641_RS03695 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AF2641_RS03700 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AF2641_RS03705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AF2641_RS03710 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AF2641_RS03715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AF2641_RS03720 PF00146 NADH dehydrogenase AF2641_RS03725 PF00037 4Fe-4S binding domain AF2641_RS03730 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AF2641_RS03735 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AF2641_RS03740 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AF2641_RS03740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AF2641_RS03740 PF00361 Proton-conducting membrane transporter AF2641_RS03745 PF00361 Proton-conducting membrane transporter AF2641_RS03750 PF00361 Proton-conducting membrane transporter AF2641_RS03755 PF06612 Protein of unknown function (DUF1146) AF2641_RS03765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AF2641_RS03770 PF08486 Stage II sporulation protein AF2641_RS03775 PF01551 Peptidase family M23 AF2641_RS03780 PF12116 Stage III sporulation protein D AF2641_RS03790 PF07282 Putative transposase DNA-binding domain AF2641_RS03790 PF01385 Probable transposase AF2641_RS03790 PF12323 Helix-turn-helix domain AF2641_RS03795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AF2641_RS03795 PF00460 Flagella basal body rod protein AF2641_RS03800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AF2641_RS03800 PF00460 Flagella basal body rod protein AF2641_RS03810 PF07977 FabA-like domain AF2641_RS03825 PF02706 Chain length determinant protein AF2641_RS03825 PF13807 G-rich domain on putative tyrosine kinase AF2641_RS03830 PF13614 AAA domain AF2641_RS03845 PF00483 Nucleotidyl transferase AF2641_RS03850 PF02397 Bacterial sugar transferase AF2641_RS03855 PF01370 NAD dependent epimerase/dehydratase family AF2641_RS03860 PF16363 GDP-mannose 4,6 dehydratase AF2641_RS03870 PF00535 Glycosyl transferase family 2 AF2641_RS03875 PF00132 Bacterial transferase hexapeptide (six repeats) AF2641_RS03885 PF00535 Glycosyl transferase family 2 AF2641_RS03890 PF00132 Bacterial transferase hexapeptide (six repeats) AF2641_RS03900 PF01609 Transposase DDE domain AF2641_RS03905 PF00534 Glycosyl transferases group 1 AF2641_RS03905 PF09318 Glycosyl transferase 1 domain A AF2641_RS03925 PF13439 Glycosyltransferase Family 4 AF2641_RS03925 PF00534 Glycosyl transferases group 1 AF2641_RS03930 PF03808 Glycosyl transferase WecB/TagA/CpsF family AF2641_RS03935 PF01050 Mannose-6-phosphate isomerase AF2641_RS03935 PF00483 Nucleotidyl transferase AF2641_RS03945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AF2641_RS03945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AF2641_RS03945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AF2641_RS03945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AF2641_RS03950 PF02378 Phosphotransferase system, EIIC AF2641_RS03950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AF2641_RS03950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AF2641_RS03955 PF01238 Phosphomannose isomerase type I AF2641_RS03960 PF00480 ROK family AF2641_RS03985 PF09154 Domain of unknown function (DUF1939) AF2641_RS03985 PF00128 Alpha amylase, catalytic domain AF2641_RS03995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AF2641_RS03995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AF2641_RS03995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AF2641_RS04000 PF16363 GDP-mannose 4,6 dehydratase AF2641_RS04005 PF00873 AcrB/AcrD/AcrF family AF2641_RS04010 PF00176 SNF2 family N-terminal domain AF2641_RS04010 PF00271 Helicase conserved C-terminal domain AF2641_RS04010 PF12419 SNF2 Helicase protein AF2641_RS04020 PF02661 Fic/DOC family AF2641_RS04020 PF13784 Fic/DOC family N-terminal AF2641_RS04035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AF2641_RS04035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AF2641_RS04040 PF13509 S1 domain AF2641_RS04040 PF17783 CvfB-like winged helix domain AF2641_RS04045 PF05225 helix-turn-helix, Psq domain AF2641_RS04045 PF02810 SEC-C motif AF2641_RS04055 PF00963 Cohesin domain AF2641_RS04055 PF00395 S-layer homology domain AF2641_RS04065 PF03808 Glycosyl transferase WecB/TagA/CpsF family AF2641_RS04070 PF14667 Polysaccharide biosynthesis C-terminal domain AF2641_RS04070 PF01943 Polysaccharide biosynthesis protein AF2641_RS04085 PF02743 Cache domain AF2641_RS04085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS04085 PF00672 HAMP domain AF2641_RS04090 PF06338 ComK protein AF2641_RS04100 PF00696 Amino acid kinase family AF2641_RS04100 PF13840 ACT domain AF2641_RS04110 PF04203 Sortase domain AF2641_RS04115 PF14183 YwpF-like protein AF2641_RS04125 PF01381 Helix-turn-helix AF2641_RS04140 PF07516 SecA Wing and Scaffold domain AF2641_RS04140 PF01043 SecA preprotein cross-linking domain AF2641_RS04140 PF07517 SecA DEAD-like domain AF2641_RS04145 PF05922 Peptidase inhibitor I9 AF2641_RS04145 PF00082 Subtilase family AF2641_RS04150 PF00395 S-layer homology domain AF2641_RS04155 PF01476 LysM domain AF2641_RS04155 PF00877 NlpC/P60 family AF2641_RS04160 PF00395 S-layer homology domain AF2641_RS04170 PF00128 Alpha amylase, catalytic domain AF2641_RS04170 PF00395 S-layer homology domain AF2641_RS04170 PF02903 Alpha amylase, N-terminal ig-like domain AF2641_RS04175 PF00082 Subtilase family AF2641_RS04175 PF02225 PA domain AF2641_RS04175 PF00746 LPXTG cell wall anchor motif AF2641_RS04175 PF06280 Fn3-like domain AF2641_RS04180 PF00128 Alpha amylase, catalytic domain AF2641_RS04180 PF02903 Alpha amylase, N-terminal ig-like domain AF2641_RS04180 PF00395 S-layer homology domain AF2641_RS04190 PF07833 Copper amine oxidase N-terminal domain AF2641_RS04195 PF00149 Calcineurin-like phosphoesterase AF2641_RS04195 PF02872 5'-nucleotidase, C-terminal domain AF2641_RS04200 PF00082 Subtilase family AF2641_RS04205 PF00395 S-layer homology domain AF2641_RS04205 PF01520 N-acetylmuramoyl-L-alanine amidase AF2641_RS04210 PF00395 S-layer homology domain AF2641_RS04210 PF00963 Cohesin domain AF2641_RS04215 PF08486 Stage II sporulation protein AF2641_RS04215 PF04122 Putative cell wall binding repeat 2 AF2641_RS04225 PF00953 Glycosyl transferase family 4 AF2641_RS04230 PF03816 Cell envelope-related transcriptional attenuator domain AF2641_RS04235 PF01205 Uncharacterized protein family UPF0029 AF2641_RS04235 PF09186 Domain of unknown function (DUF1949) AF2641_RS04240 PF07730 Histidine kinase AF2641_RS04240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS04240 PF05384 Sensor protein DegS AF2641_RS04245 PF00072 Response regulator receiver domain AF2641_RS04245 PF00196 Bacterial regulatory proteins, luxR family AF2641_RS04255 PF02645 Uncharacterised protein, DegV family COG1307 AF2641_RS04275 PF01312 FlhB HrpN YscU SpaS Family AF2641_RS04285 PF00669 Bacterial flagellin N-terminal helical region AF2641_RS04285 PF00700 Bacterial flagellin C-terminal helical region AF2641_RS04285 PF00700 Bacterial flagellin C-terminal helical region AF2641_RS04285 PF00669 Bacterial flagellin N-terminal helical region AF2641_RS04290 PF03885 Protein of unknown function (DUF327) AF2641_RS04310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AF2641_RS04310 PF00460 Flagella basal body rod protein AF2641_RS04315 PF00700 Bacterial flagellin C-terminal helical region AF2641_RS04315 PF00669 Bacterial flagellin N-terminal helical region AF2641_RS04325 PF02623 FliW protein AF2641_RS04330 PF02599 Global regulator protein family AF2641_RS04340 PF00669 Bacterial flagellin N-terminal helical region AF2641_RS04340 PF00700 Bacterial flagellin C-terminal helical region AF2641_RS04345 PF00669 Bacterial flagellin N-terminal helical region AF2641_RS04345 PF00700 Bacterial flagellin C-terminal helical region AF2641_RS04350 PF03646 FlaG protein AF2641_RS04355 PF02465 Flagellar hook-associated protein 2 N-terminus AF2641_RS04355 PF07196 Flagellin hook IN motif AF2641_RS04355 PF07195 Flagellar hook-associated protein 2 C-terminus AF2641_RS04360 PF02561 Flagellar protein FliS AF2641_RS04375 PF01966 HD domain AF2641_RS04375 PF11871 Domain of unknown function (DUF3391) AF2641_RS04380 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AF2641_RS04380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AF2641_RS04390 PF01043 SecA preprotein cross-linking domain AF2641_RS04390 PF07517 SecA DEAD-like domain AF2641_RS04390 PF02810 SEC-C motif AF2641_RS04390 PF07516 SecA Wing and Scaffold domain AF2641_RS04400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AF2641_RS04400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AF2641_RS04405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AF2641_RS04410 PF00005 ABC transporter AF2641_RS04415 PF18075 FtsX extracellular domain AF2641_RS04415 PF02687 FtsX-like permease family AF2641_RS04420 PF01551 Peptidase family M23 AF2641_RS04420 PF08525 Opacity-associated protein A N-terminal motif AF2641_RS04420 PF01476 LysM domain AF2641_RS04425 PF03572 Peptidase family S41 AF2641_RS04425 PF17820 PDZ domain AF2641_RS04425 PF01471 Putative peptidoglycan binding domain AF2641_RS04430 PF13411 MerR HTH family regulatory protein AF2641_RS04435 PF17820 PDZ domain AF2641_RS04440 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) AF2641_RS04445 PF17757 UvrB interaction domain AF2641_RS04445 PF12344 Ultra-violet resistance protein B AF2641_RS04445 PF02151 UvrB/uvrC motif AF2641_RS04445 PF04851 Type III restriction enzyme, res subunit AF2641_RS04445 PF00271 Helicase conserved C-terminal domain AF2641_RS04450 PF00005 ABC transporter AF2641_RS04450 PF17755 UvrA DNA-binding domain AF2641_RS04450 PF17760 UvrA interaction domain AF2641_RS04465 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AF2641_RS04475 PF01790 Prolipoprotein diacylglyceryl transferase AF2641_RS04480 PF07670 Nucleoside recognition AF2641_RS04485 PF13419 Haloacid dehalogenase-like hydrolase AF2641_RS04490 PF14602 Hexapeptide repeat of succinyl-transferase AF2641_RS04495 PF13393 Histidyl-tRNA synthetase AF2641_RS04500 PF01634 ATP phosphoribosyltransferase AF2641_RS04510 PF00475 Imidazoleglycerol-phosphate dehydratase AF2641_RS04515 PF00117 Glutamine amidotransferase class-I AF2641_RS04520 PF00977 Histidine biosynthesis protein AF2641_RS04525 PF00977 Histidine biosynthesis protein AF2641_RS04530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AF2641_RS04530 PF01502 Phosphoribosyl-AMP cyclohydrolase AF2641_RS04540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS04545 PF00293 NUDIX domain AF2641_RS04550 PF03668 P-loop ATPase protein family AF2641_RS04555 PF01933 Uncharacterised protein family UPF0052 AF2641_RS04560 PF10298 WhiA N-terminal LAGLIDADG-like domain AF2641_RS04560 PF14527 WhiA LAGLIDADG-like domain AF2641_RS04560 PF02650 WhiA C-terminal HTH domain AF2641_RS04565 PF00381 PTS HPr component phosphorylation site AF2641_RS04570 PF00574 Clp protease AF2641_RS04580 PF04552 Sigma-54, DNA binding domain AF2641_RS04580 PF00309 Sigma-54 factor, Activator interacting domain (AID) AF2641_RS04580 PF04963 Sigma-54 factor, core binding domain AF2641_RS04590 PF04198 Putative sugar-binding domain AF2641_RS04595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AF2641_RS04595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AF2641_RS04600 PF00162 Phosphoglycerate kinase AF2641_RS04605 PF00121 Triosephosphate isomerase AF2641_RS04610 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AF2641_RS04610 PF01676 Metalloenzyme superfamily AF2641_RS04615 PF00113 Enolase, C-terminal TIM barrel domain AF2641_RS04615 PF03952 Enolase, N-terminal domain AF2641_RS04635 PF05593 RHS Repeat AF2641_RS04675 PF05593 RHS Repeat AF2641_RS04680 PF05593 RHS Repeat AF2641_RS04690 PF05593 RHS Repeat AF2641_RS04700 PF05593 RHS Repeat AF2641_RS04715 PF05593 RHS Repeat AF2641_RS04730 PF03840 Preprotein translocase SecG subunit AF2641_RS04735 PF12146 Serine aminopeptidase, S33 AF2641_RS04740 PF17876 Cold shock domain AF2641_RS04740 PF00575 S1 RNA binding domain AF2641_RS04740 PF08206 Ribonuclease B OB domain AF2641_RS04740 PF00773 RNB domain AF2641_RS04745 PF01668 SmpB protein AF2641_RS04765 PF07875 Coat F domain AF2641_RS04775 PF01619 Proline dehydrogenase AF2641_RS04780 PF14115 YuzL-like protein AF2641_RS04785 PF00378 Enoyl-CoA hydratase/isomerase AF2641_RS04785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF2641_RS04785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF2641_RS04790 PF00108 Thiolase, N-terminal domain AF2641_RS04790 PF02803 Thiolase, C-terminal domain AF2641_RS04795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS04795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF2641_RS04795 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS04800 PF03960 ArsC family AF2641_RS04805 PF01597 Glycine cleavage H-protein AF2641_RS04815 PF01751 Toprim domain AF2641_RS04820 PF00085 Thioredoxin AF2641_RS04830 PF01053 Cys/Met metabolism PLP-dependent enzyme AF2641_RS04845 PF09383 NIL domain AF2641_RS04845 PF00005 ABC transporter AF2641_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS04855 PF03180 NLPA lipoprotein AF2641_RS04860 PF02627 Carboxymuconolactone decarboxylase family AF2641_RS04865 PF00005 ABC transporter AF2641_RS04870 PF01458 Uncharacterized protein family (UPF0051) AF2641_RS04875 PF00266 Aminotransferase class-V AF2641_RS04880 PF01592 NifU-like N terminal domain AF2641_RS04885 PF01458 Uncharacterized protein family (UPF0051) AF2641_RS04890 PF02899 Phage integrase, N-terminal SAM-like domain AF2641_RS04890 PF00589 Phage integrase family AF2641_RS04925 PF01695 IstB-like ATP binding protein AF2641_RS04935 PF01695 IstB-like ATP binding protein AF2641_RS04945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AF2641_RS04965 PF00872 Transposase, Mutator family AF2641_RS04970 PF00579 tRNA synthetases class I (W and Y) AF2641_RS04975 PF07690 Major Facilitator Superfamily AF2641_RS05000 PF04738 Lantibiotic dehydratase, N terminus AF2641_RS05000 PF14028 Lantibiotic biosynthesis dehydratase C-term AF2641_RS05005 PF02899 Phage integrase, N-terminal SAM-like domain AF2641_RS05005 PF00589 Phage integrase family AF2641_RS05035 PF00005 ABC transporter AF2641_RS05045 PF01904 Protein of unknown function DUF72 AF2641_RS05050 PF01925 Sulfite exporter TauE/SafE AF2641_RS05055 PF02872 5'-nucleotidase, C-terminal domain AF2641_RS05060 PF08827 Domain of unknown function (DUF1805) AF2641_RS05065 PF09560 Sporulation protein YunB (Spo_YunB) AF2641_RS05070 PF00209 Sodium:neurotransmitter symporter family AF2641_RS05080 PF01551 Peptidase family M23 AF2641_RS05085 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AF2641_RS05085 PF04055 Radical SAM superfamily AF2641_RS05090 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AF2641_RS05095 PF06265 Protein of unknown function (DUF1027) AF2641_RS05110 PF01934 Protein of unknown function DUF86 AF2641_RS05120 PF13344 Haloacid dehalogenase-like hydrolase AF2641_RS05125 PF04608 Phosphatidylglycerophosphatase A AF2641_RS05135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AF2641_RS05135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AF2641_RS05140 PF01842 ACT domain AF2641_RS05140 PF00742 Homoserine dehydrogenase AF2641_RS05140 PF03447 Homoserine dehydrogenase, NAD binding domain AF2641_RS05145 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS05150 PF00288 GHMP kinases N terminal domain AF2641_RS05150 PF08544 GHMP kinases C terminal AF2641_RS05155 PF01106 NifU-like domain AF2641_RS05160 PF07315 Protein of unknown function (DUF1462) AF2641_RS05165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS05170 PF07293 Protein of unknown function (DUF1450) AF2641_RS05180 PF01678 Diaminopimelate epimerase AF2641_RS05185 PF01521 Iron-sulphur cluster biosynthesis AF2641_RS05190 PF06305 Lipopolysaccharide assembly protein A domain AF2641_RS05195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS05205 PF14068 Putative membrane protein AF2641_RS05210 PF06725 3D domain AF2641_RS05215 PF02632 BioY family AF2641_RS05225 PF03600 Citrate transporter AF2641_RS05240 PF00080 Copper/zinc superoxide dismutase (SODC) AF2641_RS05245 PF01037 Lrp/AsnC ligand binding domain AF2641_RS05250 PF00155 Aminotransferase class I and II AF2641_RS05260 PF00575 S1 RNA binding domain AF2641_RS05265 PF04070 Domain of unknown function (DUF378) AF2641_RS05270 PF00465 Iron-containing alcohol dehydrogenase AF2641_RS05275 PF00342 Phosphoglucose isomerase AF2641_RS05280 PF08868 YugN-like family AF2641_RS05285 PF07885 Ion channel AF2641_RS05285 PF02254 TrkA-N domain AF2641_RS05290 PF08141 Small acid-soluble spore protein H family AF2641_RS05340 PF14867 Lantibiotic alpha AF2641_RS05345 PF00005 ABC transporter AF2641_RS05345 PF03412 Peptidase C39 family AF2641_RS05345 PF00664 ABC transporter transmembrane region AF2641_RS05400 PF00005 ABC transporter AF2641_RS05405 PF01610 Transposase AF2641_RS05405 PF13542 Helix-turn-helix domain of transposase family ISL3 AF2641_RS05405 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AF2641_RS05430 PF13411 MerR HTH family regulatory protein AF2641_RS05435 PF00571 CBS domain AF2641_RS05435 PF01595 Cyclin M transmembrane N-terminal domain AF2641_RS05435 PF03471 Transporter associated domain AF2641_RS05440 PF01022 Bacterial regulatory protein, arsR family AF2641_RS05445 PF00072 Response regulator receiver domain AF2641_RS05450 PF02308 MgtC family AF2641_RS05505 PF05697 Bacterial trigger factor protein (TF) AF2641_RS05505 PF05698 Bacterial trigger factor protein (TF) C-terminus AF2641_RS05585 PF16916 Dimerisation domain of Zinc Transporter AF2641_RS05585 PF01545 Cation efflux family AF2641_RS05590 PF00128 Alpha amylase, catalytic domain AF2641_RS05590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AF2641_RS05590 PF02806 Alpha amylase, C-terminal all-beta domain AF2641_RS05595 PF00483 Nucleotidyl transferase AF2641_RS05600 PF00483 Nucleotidyl transferase AF2641_RS05605 PF08323 Starch synthase catalytic domain AF2641_RS05605 PF00534 Glycosyl transferases group 1 AF2641_RS05610 PF00343 Carbohydrate phosphorylase AF2641_RS05615 PF01258 Prokaryotic dksA/traR C4-type zinc finger AF2641_RS05620 PF01040 UbiA prenyltransferase family AF2641_RS05625 PF00425 chorismate binding enzyme AF2641_RS05630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF2641_RS05630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF2641_RS05630 PF16582 Middle domain of thiamine pyrophosphate AF2641_RS05635 PF00561 alpha/beta hydrolase fold AF2641_RS05640 PF00378 Enoyl-CoA hydratase/isomerase AF2641_RS05645 PF00501 AMP-binding enzyme AF2641_RS05645 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS05650 PF02322 Cytochrome bd terminal oxidase subunit II AF2641_RS05655 PF01654 Cytochrome bd terminal oxidase subunit I AF2641_RS05660 PF07561 Domain of Unknown Function (DUF1540) AF2641_RS05675 PF00268 Ribonucleotide reductase, small chain AF2641_RS05680 PF00258 Flavodoxin AF2641_RS05685 PF01385 Probable transposase AF2641_RS05685 PF07282 Putative transposase DNA-binding domain AF2641_RS05685 PF12323 Helix-turn-helix domain AF2641_RS05690 PF02867 Ribonucleotide reductase, barrel domain AF2641_RS05690 PF00317 Ribonucleotide reductase, all-alpha domain AF2641_RS05690 PF03477 ATP cone domain AF2641_RS05695 PF02322 Cytochrome bd terminal oxidase subunit II AF2641_RS05700 PF01654 Cytochrome bd terminal oxidase subunit I AF2641_RS05705 PF01297 Zinc-uptake complex component A periplasmic AF2641_RS05705 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AF2641_RS05710 PF02492 CobW/HypB/UreG, nucleotide-binding domain AF2641_RS05710 PF07683 Cobalamin synthesis protein cobW C-terminal domain AF2641_RS05715 PF01809 Putative membrane protein insertion efficiency factor AF2641_RS05720 PF02664 S-Ribosylhomocysteinase (LuxS) AF2641_RS05730 PF00210 Ferritin-like domain AF2641_RS05740 PF00293 NUDIX domain AF2641_RS05745 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS05750 PF00005 ABC transporter AF2641_RS05760 PF10763 Protein of unknown function (DUF2584) AF2641_RS05770 PF00005 ABC transporter AF2641_RS05775 PF02361 Cobalt transport protein AF2641_RS05795 PF00438 S-adenosylmethionine synthetase, N-terminal domain AF2641_RS05795 PF02772 S-adenosylmethionine synthetase, central domain AF2641_RS05795 PF02773 S-adenosylmethionine synthetase, C-terminal domain AF2641_RS05800 PF01569 PAP2 superfamily AF2641_RS05805 PF00132 Bacterial transferase hexapeptide (six repeats) AF2641_RS05810 PF12146 Serine aminopeptidase, S33 AF2641_RS05815 PF10776 Protein of unknown function (DUF2600) AF2641_RS05825 PF06962 Putative rRNA methylase AF2641_RS05830 PF16199 Radical_SAM C-terminal domain AF2641_RS05830 PF04055 Radical SAM superfamily AF2641_RS05835 PF10732 Protein of unknown function (DUF2524) AF2641_RS05845 PF08264 Anticodon-binding domain of tRNA AF2641_RS05845 PF00133 tRNA synthetases class I (I, L, M and V) AF2641_RS05845 PF13603 Leucyl-tRNA synthetase, Domain 2 AF2641_RS05845 PF09334 tRNA synthetases class I (M) AF2641_RS05850 PF00581 Rhodanese-like domain AF2641_RS05860 PF01943 Polysaccharide biosynthesis protein AF2641_RS05860 PF14667 Polysaccharide biosynthesis C-terminal domain AF2641_RS05870 PF00849 RNA pseudouridylate synthase AF2641_RS05870 PF01479 S4 domain AF2641_RS05875 PF08220 DeoR-like helix-turn-helix domain AF2641_RS05880 PF01546 Peptidase family M20/M25/M40 AF2641_RS05885 PF12832 MFS_1 like family AF2641_RS05890 PF02834 LigT like Phosphoesterase AF2641_RS05895 PF03788 LrgA family AF2641_RS05900 PF04172 LrgB-like family AF2641_RS05910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AF2641_RS05910 PF00128 Alpha amylase, catalytic domain AF2641_RS05910 PF17999 Pullulanase N1-terminal domain AF2641_RS05915 PF01636 Phosphotransferase enzyme family AF2641_RS05920 PF14165 YtzH-like protein AF2641_RS05925 PF02390 Putative methyltransferase AF2641_RS05930 PF00753 Metallo-beta-lactamase superfamily AF2641_RS05940 PF05343 M42 glutamyl aminopeptidase AF2641_RS05945 PF01931 Protein of unknown function DUF84 AF2641_RS05950 PF00085 Thioredoxin AF2641_RS05955 PF07285 Protein of unknown function (DUF1444) AF2641_RS05960 PF14794 Domain of unknown function (DUF4479) AF2641_RS05960 PF01588 Putative tRNA binding domain AF2641_RS05965 PF01580 FtsK/SpoIIIE family AF2641_RS05965 PF09397 Ftsk gamma domain AF2641_RS05965 PF17854 FtsK alpha domain AF2641_RS05965 PF09397 Ftsk gamma domain AF2641_RS05965 PF17854 FtsK alpha domain AF2641_RS05965 PF01580 FtsK/SpoIIIE family AF2641_RS05975 PF08245 Mur ligase middle domain AF2641_RS05975 PF02875 Mur ligase family, glutamate ligase domain AF2641_RS05975 PF01225 Mur ligase family, catalytic domain AF2641_RS05980 PF11009 Protein of unknown function (DUF2847) AF2641_RS05990 PF06103 Bacterial protein of unknown function (DUF948) AF2641_RS05995 PF02073 Thermophilic metalloprotease (M29) AF2641_RS06000 PF02491 SHS2 domain inserted in FTSA AF2641_RS06005 PF00793 DAHP synthetase I family AF2641_RS06005 PF01817 Chorismate mutase type II AF2641_RS06010 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS06015 PF01609 Transposase DDE domain AF2641_RS06020 PF00850 Histone deacetylase domain AF2641_RS06025 PF00571 CBS domain AF2641_RS06030 PF00583 Acetyltransferase (GNAT) family AF2641_RS06035 PF00501 AMP-binding enzyme AF2641_RS06035 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS06040 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS06040 PF00912 Transglycosylase AF2641_RS06045 PF00579 tRNA synthetases class I (W and Y) AF2641_RS06045 PF01479 S4 domain AF2641_RS06050 PF00163 Ribosomal protein S4/S9 N-terminal domain AF2641_RS06050 PF01479 S4 domain AF2641_RS06055 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS06060 PF13185 GAF domain AF2641_RS06065 PF02811 PHP domain AF2641_RS06070 PF06160 Septation ring formation regulator, EzrA AF2641_RS06075 PF05525 Branched-chain amino acid transport protein AF2641_RS06080 PF00266 Aminotransferase class-V AF2641_RS06085 PF02568 Thiamine biosynthesis protein (ThiI) AF2641_RS06085 PF02926 THUMP domain AF2641_RS06090 PF00269 Small, acid-soluble spore proteins, alpha/beta type AF2641_RS06095 PF00501 AMP-binding enzyme AF2641_RS06095 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS06100 PF12399 Branched-chain amino acid ATP-binding cassette transporter AF2641_RS06100 PF00005 ABC transporter AF2641_RS06105 PF00501 AMP-binding enzyme AF2641_RS06110 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS06120 PF13458 Periplasmic binding protein AF2641_RS06125 PF00005 ABC transporter AF2641_RS06135 PF01513 ATP-NAD kinase AF2641_RS06145 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AF2641_RS06150 PF08534 Redoxin AF2641_RS06155 PF02384 N-6 DNA Methylase AF2641_RS06160 PF00871 Acetokinase family AF2641_RS06170 PF00764 Arginosuccinate synthase AF2641_RS06175 PF00206 Lyase AF2641_RS06175 PF14698 Argininosuccinate lyase C-terminal AF2641_RS06190 PF01321 Creatinase/Prolidase N-terminal domain AF2641_RS06190 PF00557 Metallopeptidase family M24 AF2641_RS06200 PF07085 DRTGG domain AF2641_RS06200 PF03061 Thioesterase superfamily AF2641_RS06200 PF00571 CBS domain AF2641_RS06200 PF00392 Bacterial regulatory proteins, gntR family AF2641_RS06205 PF14007 YtpI-like protein AF2641_RS06210 PF01368 DHH family AF2641_RS06210 PF02272 DHHA1 domain AF2641_RS06220 PF14034 Sporulation protein YtrH AF2641_RS06225 PF07733 Bacterial DNA polymerase III alpha NTPase domain AF2641_RS06225 PF01336 OB-fold nucleic acid binding domain AF2641_RS06225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AF2641_RS06225 PF14579 Helix-hairpin-helix motif AF2641_RS06225 PF02811 PHP domain AF2641_RS06230 PF00390 Malic enzyme, N-terminal domain AF2641_RS06230 PF03949 Malic enzyme, NAD binding domain AF2641_RS06235 PF00392 Bacterial regulatory proteins, gntR family AF2641_RS06235 PF07729 FCD domain AF2641_RS06240 PF17848 Acetyl-coA carboxylase zinc finger domain AF2641_RS06240 PF01039 Carboxyl transferase domain AF2641_RS06245 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AF2641_RS06250 PF00365 Phosphofructokinase AF2641_RS06255 PF00391 PEP-utilising enzyme, mobile domain AF2641_RS06255 PF00224 Pyruvate kinase, barrel domain AF2641_RS06255 PF02887 Pyruvate kinase, alpha/beta domain AF2641_RS06260 PF04186 FxsA cytoplasmic membrane protein AF2641_RS06265 PF01594 AI-2E family transporter AF2641_RS06270 PF04284 Protein of unknown function (DUF441) AF2641_RS06275 PF00285 Citrate synthase, C-terminal domain AF2641_RS06280 PF00180 Isocitrate/isopropylmalate dehydrogenase AF2641_RS06285 PF00056 lactate/malate dehydrogenase, NAD binding domain AF2641_RS06285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AF2641_RS06295 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS06295 PF00072 Response regulator receiver domain AF2641_RS06300 PF00989 PAS fold AF2641_RS06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS06300 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS06300 PF16736 Single Cache-like AF2641_RS06305 PF01367 5'-3' exonuclease, C-terminal SAM fold AF2641_RS06305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AF2641_RS06305 PF00476 DNA polymerase family A AF2641_RS06310 PF06827 Zinc finger found in FPG and IleRS AF2641_RS06310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AF2641_RS06310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AF2641_RS06315 PF02659 Putative manganese efflux pump AF2641_RS06320 PF01121 Dephospho-CoA kinase AF2641_RS06325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AF2641_RS06325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AF2641_RS06330 PF02675 S-adenosylmethionine decarboxylase AF2641_RS06340 PF03477 ATP cone domain AF2641_RS06345 PF07261 Replication initiation and membrane attachment AF2641_RS06350 PF07319 Primosomal protein DnaI N-terminus AF2641_RS06350 PF01695 IstB-like ATP binding protein AF2641_RS06355 PF08812 YtxC-like family AF2641_RS06360 PF02824 TGS domain AF2641_RS06360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF2641_RS06360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AF2641_RS06360 PF03129 Anticodon binding domain AF2641_RS06365 PF00707 Translation initiation factor IF-3, C-terminal domain AF2641_RS06365 PF05198 Translation initiation factor IF-3, N-terminal domain AF2641_RS06370 PF01632 Ribosomal protein L35 AF2641_RS06375 PF00453 Ribosomal protein L20 AF2641_RS06385 PF05343 M42 glutamyl aminopeptidase AF2641_RS06390 PF13416 Bacterial extracellular solute-binding protein AF2641_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS06405 PF16875 Glycosyl hydrolase family 36 N-terminal domain AF2641_RS06405 PF16874 Glycosyl hydrolase family 36 C-terminal domain AF2641_RS06410 PF10509 Galactokinase galactose-binding signature AF2641_RS06410 PF08544 GHMP kinases C terminal AF2641_RS06410 PF00288 GHMP kinases N terminal domain AF2641_RS06415 PF16363 GDP-mannose 4,6 dehydratase AF2641_RS06420 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AF2641_RS06420 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AF2641_RS06425 PF02449 Beta-galactosidase AF2641_RS06425 PF08532 Beta-galactosidase trimerisation domain AF2641_RS06425 PF08533 Beta-galactosidase C-terminal domain AF2641_RS06430 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS06435 PF01263 Aldose 1-epimerase AF2641_RS06440 PF14098 Small, acid-soluble spore protein I AF2641_RS06445 PF01625 Peptide methionine sulfoxide reductase AF2641_RS06450 PF00588 SpoU rRNA Methylase family AF2641_RS06450 PF08032 RNA 2'-O ribose methyltransferase substrate binding AF2641_RS06455 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AF2641_RS06455 PF01409 tRNA synthetases class II core domain (F) AF2641_RS06460 PF03483 B3/4 domain AF2641_RS06460 PF03147 Ferredoxin-fold anticodon binding domain AF2641_RS06460 PF01588 Putative tRNA binding domain AF2641_RS06460 PF03484 tRNA synthetase B5 domain AF2641_RS06460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AF2641_RS06480 PF05593 RHS Repeat AF2641_RS06490 PF05593 RHS Repeat AF2641_RS06525 PF07730 Histidine kinase AF2641_RS06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS06530 PF00072 Response regulator receiver domain AF2641_RS06530 PF00196 Bacterial regulatory proteins, luxR family AF2641_RS06565 PF00664 ABC transporter transmembrane region AF2641_RS06565 PF00005 ABC transporter AF2641_RS06570 PF00005 ABC transporter AF2641_RS06580 PF01609 Transposase DDE domain AF2641_RS06600 PF12679 ABC-2 family transporter protein AF2641_RS06615 PF03176 MMPL family AF2641_RS06630 PF05164 Cell division protein ZapA AF2641_RS06635 PF02674 Colicin V production protein AF2641_RS06640 PF14716 Helix-hairpin-helix domain AF2641_RS06640 PF14791 DNA polymerase beta thumb AF2641_RS06640 PF02811 PHP domain AF2641_RS06645 PF01713 Smr domain AF2641_RS06645 PF00488 MutS domain V AF2641_RS06650 PF03994 Domain of Unknown Function (DUF350) AF2641_RS06660 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS06660 PF00501 AMP-binding enzyme AF2641_RS06665 PF08359 YsiA-like protein, C-terminal region AF2641_RS06665 PF00440 Bacterial regulatory proteins, tetR family AF2641_RS06670 PF00378 Enoyl-CoA hydratase/isomerase AF2641_RS06675 PF01012 Electron transfer flavoprotein domain AF2641_RS06680 PF00766 Electron transfer flavoprotein FAD-binding domain AF2641_RS06680 PF01012 Electron transfer flavoprotein domain AF2641_RS06685 PF00085 Thioredoxin AF2641_RS06695 PF16363 GDP-mannose 4,6 dehydratase AF2641_RS06710 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AF2641_RS06710 PF00535 Glycosyl transferase family 2 AF2641_RS06730 PF08459 UvrC Helix-hairpin-helix N-terminal AF2641_RS06730 PF01541 GIY-YIG catalytic domain AF2641_RS06730 PF02151 UvrB/uvrC motif AF2641_RS06735 PF10702 Protein of unknown function (DUF2507) AF2641_RS06740 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AF2641_RS06745 PF00890 FAD binding domain AF2641_RS06745 PF02910 Fumarate reductase flavoprotein C-term AF2641_RS06750 PF13085 2Fe-2S iron-sulfur cluster binding domain AF2641_RS06750 PF13183 4Fe-4S dicluster domain AF2641_RS06755 PF03061 Thioesterase superfamily AF2641_RS06760 PF00196 Bacterial regulatory proteins, luxR family AF2641_RS06765 PF01177 Asp/Glu/Hydantoin racemase AF2641_RS06770 PF10646 Sporulation and spore germination AF2641_RS06775 PF03725 3' exoribonuclease family, domain 2 AF2641_RS06775 PF01138 3' exoribonuclease family, domain 1 AF2641_RS06780 PF01725 Ham1 family AF2641_RS06785 PF12850 Calcineurin-like phosphoesterase superfamily domain AF2641_RS06795 PF01063 Amino-transferase class IV AF2641_RS06800 PF00205 Thiamine pyrophosphate enzyme, central domain AF2641_RS06800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF2641_RS06800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF2641_RS06805 PF10369 Small subunit of acetolactate synthase AF2641_RS06805 PF01842 ACT domain AF2641_RS06810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AF2641_RS06810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AF2641_RS06815 PF00682 HMGL-like AF2641_RS06815 PF08502 LeuA allosteric (dimerisation) domain AF2641_RS06820 PF00180 Isocitrate/isopropylmalate dehydrogenase AF2641_RS06825 PF00330 Aconitase family (aconitate hydratase) AF2641_RS06830 PF00694 Aconitase C-terminal domain AF2641_RS06840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AF2641_RS06840 PF05698 Bacterial trigger factor protein (TF) C-terminus AF2641_RS06840 PF05697 Bacterial trigger factor protein (TF) AF2641_RS06845 PF06689 ClpX C4-type zinc finger AF2641_RS06845 PF10431 C-terminal, D2-small domain, of ClpB protein AF2641_RS06845 PF07724 AAA domain (Cdc48 subfamily) AF2641_RS06850 PF05362 Lon protease (S16) C-terminal proteolytic domain AF2641_RS06850 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS06855 PF02190 ATP-dependent protease La (LON) substrate-binding domain AF2641_RS06855 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS06855 PF05362 Lon protease (S16) C-terminal proteolytic domain AF2641_RS06860 PF01926 50S ribosome-binding GTPase AF2641_RS06870 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AF2641_RS06870 PF01488 Shikimate / quinate 5-dehydrogenase AF2641_RS06870 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AF2641_RS06875 PF01578 Cytochrome C assembly protein AF2641_RS06880 PF03900 Porphobilinogen deaminase, C-terminal domain AF2641_RS06880 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AF2641_RS06885 PF02602 Uroporphyrinogen-III synthase HemD AF2641_RS06890 PF00490 Delta-aminolevulinic acid dehydratase AF2641_RS06895 PF00202 Aminotransferase class-III AF2641_RS06900 PF01476 LysM domain AF2641_RS06900 PF01476 LysM domain AF2641_RS06915 PF00133 tRNA synthetases class I (I, L, M and V) AF2641_RS06915 PF08264 Anticodon-binding domain of tRNA AF2641_RS06915 PF10458 Valyl tRNA synthetase tRNA binding arm AF2641_RS06920 PF02875 Mur ligase family, glutamate ligase domain AF2641_RS06920 PF08245 Mur ligase middle domain AF2641_RS06965 PF00437 Type II/IV secretion system protein AF2641_RS06965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AF2641_RS06970 PF00437 Type II/IV secretion system protein AF2641_RS06975 PF00482 Type II secretion system (T2SS), protein F AF2641_RS06980 PF00114 Pilin (bacterial filament) AF2641_RS06980 PF07963 Prokaryotic N-terminal methylation motif AF2641_RS06985 PF06750 Bacterial Peptidase A24 N-terminal domain AF2641_RS06985 PF01478 Type IV leader peptidase family AF2641_RS07015 PF02545 Maf-like protein AF2641_RS07020 PF04002 RadC-like JAB domain AF2641_RS07030 PF04085 rod shape-determining protein MreC AF2641_RS07040 PF03775 Septum formation inhibitor MinC, C-terminal domain AF2641_RS07045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AF2641_RS07050 PF01551 Peptidase family M23 AF2641_RS07055 PF02163 Peptidase family M50 AF2641_RS07060 PF00829 Ribosomal prokaryotic L21 protein AF2641_RS07065 PF04327 Cysteine protease Prp AF2641_RS07070 PF01016 Ribosomal L27 protein AF2641_RS07075 PF14682 Sporulation initiation phospho-transferase B, C-terminal AF2641_RS07075 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AF2641_RS07080 PF09269 Domain of unknown function (DUF1967) AF2641_RS07080 PF01926 50S ribosome-binding GTPase AF2641_RS07080 PF01018 GTP1/OBG AF2641_RS07085 PF01842 ACT domain AF2641_RS07090 PF01842 ACT domain AF2641_RS07090 PF00800 Prephenate dehydratase AF2641_RS07095 PF02829 3H domain AF2641_RS07095 PF08279 HTH domain AF2641_RS07100 PF00266 Aminotransferase class-V AF2641_RS07105 PF02910 Fumarate reductase flavoprotein C-term AF2641_RS07105 PF00890 FAD binding domain AF2641_RS07110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AF2641_RS07110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AF2641_RS07115 PF02445 Quinolinate synthetase A protein AF2641_RS07120 PF01476 LysM domain AF2641_RS07125 PF02540 NAD synthase AF2641_RS07130 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AF2641_RS07135 PF01709 Transcriptional regulator AF2641_RS07140 PF08955 BofC C-terminal domain AF2641_RS07140 PF08977 Bypass of Forespore C, N terminal AF2641_RS07145 PF01330 RuvA N terminal domain AF2641_RS07145 PF07499 RuvA, C-terminal domain AF2641_RS07150 PF05491 RuvB C-terminal winged helix domain AF2641_RS07150 PF05496 Holliday junction DNA helicase RuvB P-loop domain AF2641_RS07150 PF17864 RuvB AAA lid domain AF2641_RS07155 PF12323 Helix-turn-helix domain AF2641_RS07155 PF01385 Probable transposase AF2641_RS07155 PF07282 Putative transposase DNA-binding domain AF2641_RS07160 PF11146 Protein of unknown function (DUF2905) AF2641_RS07165 PF02547 Queuosine biosynthesis protein AF2641_RS07170 PF01702 Queuine tRNA-ribosyltransferase AF2641_RS07175 PF02699 Preprotein translocase subunit AF2641_RS07180 PF12670 Protein of unknown function (DUF3792) AF2641_RS07185 PF04239 Protein of unknown function (DUF421) AF2641_RS07190 PF14667 Polysaccharide biosynthesis C-terminal domain AF2641_RS07190 PF01943 Polysaccharide biosynthesis protein AF2641_RS07195 PF13797 Post-transcriptional regulator AF2641_RS07200 PF07549 SecD/SecF GG Motif AF2641_RS07200 PF02355 Protein export membrane protein AF2641_RS07205 PF16916 Dimerisation domain of Zinc Transporter AF2641_RS07205 PF01545 Cation efflux family AF2641_RS07210 PF01368 DHH family AF2641_RS07210 PF02272 DHHA1 domain AF2641_RS07210 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AF2641_RS07210 PF17768 RecJ OB domain AF2641_RS07215 PF00156 Phosphoribosyl transferase domain AF2641_RS07220 PF02824 TGS domain AF2641_RS07220 PF04607 Region found in RelA / SpoT proteins AF2641_RS07220 PF13291 ACT domain AF2641_RS07225 PF02580 D-Tyr-tRNA(Tyr) deacylase AF2641_RS07230 PF08239 Bacterial SH3 domain AF2641_RS07230 PF01520 N-acetylmuramoyl-L-alanine amidase AF2641_RS07235 PF03129 Anticodon binding domain AF2641_RS07235 PF13393 Histidyl-tRNA synthetase AF2641_RS07240 PF02938 GAD domain AF2641_RS07240 PF01336 OB-fold nucleic acid binding domain AF2641_RS07240 PF00152 tRNA synthetases class II (D, K and N) AF2641_RS07250 PF00899 ThiF family AF2641_RS07255 PF00873 AcrB/AcrD/AcrF family AF2641_RS07260 PF00440 Bacterial regulatory proteins, tetR family AF2641_RS07265 PF05496 Holliday junction DNA helicase RuvB P-loop domain AF2641_RS07265 PF12002 MgsA AAA+ ATPase C terminal AF2641_RS07265 PF16193 AAA C-terminal domain AF2641_RS07270 PF02082 Transcriptional regulator AF2641_RS07275 PF00266 Aminotransferase class-V AF2641_RS07290 PF14490 Helix-hairpin-helix containing domain AF2641_RS07290 PF13538 UvrD-like helicase C-terminal domain AF2641_RS07290 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AF2641_RS07295 PF01609 Transposase DDE domain AF2641_RS07305 PF13056 Protein of unknown function (DUF3918) AF2641_RS07310 PF01594 AI-2E family transporter AF2641_RS07315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AF2641_RS07315 PF01411 tRNA synthetases class II (A) AF2641_RS07315 PF02272 DHHA1 domain AF2641_RS07320 PF06135 IreB regulatory phosphoprotein AF2641_RS07325 PF03652 Holliday junction resolvase AF2641_RS07330 PF06949 Protein of unknown function (DUF1292) AF2641_RS07335 PF02618 YceG-like family AF2641_RS07345 PF01136 Peptidase family U32 AF2641_RS07350 PF16325 Peptidase family U32 C-terminal domain AF2641_RS07350 PF01136 Peptidase family U32 AF2641_RS07355 PF00485 Phosphoribulokinase / Uridine kinase family AF2641_RS07360 PF03449 Transcription elongation factor, N-terminal AF2641_RS07360 PF01272 Transcription elongation factor, GreA/GreB, C-term AF2641_RS07365 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS07365 PF03717 Penicillin-binding Protein dimerisation domain AF2641_RS07370 PF07423 Domain of unknown function (DUF1510) AF2641_RS07375 PF10750 Protein of unknown function (DUF2536) AF2641_RS07380 PF13649 Methyltransferase domain AF2641_RS07385 PF01048 Phosphorylase superfamily AF2641_RS07390 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS07395 PF01053 Cys/Met metabolism PLP-dependent enzyme AF2641_RS07405 PF00565 Staphylococcal nuclease homologue AF2641_RS07430 PF00270 DEAD/DEAH box helicase AF2641_RS07430 PF18395 Cas3 C-terminal domain AF2641_RS07430 PF18019 HD domain AF2641_RS07440 PF01867 CRISPR associated protein Cas1 AF2641_RS07445 PF09827 CRISPR associated protein Cas2 AF2641_RS07455 PF04545 Sigma-70, region 4 AF2641_RS07455 PF04542 Sigma-70 region 2 AF2641_RS07460 PF02386 Cation transport protein AF2641_RS07465 PF13677 Membrane MotB of proton-channel complex MotA/MotB AF2641_RS07465 PF00691 OmpA family AF2641_RS07470 PF01618 MotA/TolQ/ExbB proton channel family AF2641_RS07475 PF01066 CDP-alcohol phosphatidyltransferase AF2641_RS07480 PF02666 Phosphatidylserine decarboxylase AF2641_RS07485 PF08970 Sporulation inhibitor A AF2641_RS07495 PF01926 50S ribosome-binding GTPase AF2641_RS07500 PF01488 Shikimate / quinate 5-dehydrogenase AF2641_RS07500 PF08501 Shikimate dehydrogenase substrate binding domain AF2641_RS07500 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AF2641_RS07505 PF01985 CRS1 / YhbY (CRM) domain AF2641_RS07510 PF01467 Cytidylyltransferase-like AF2641_RS07515 PF01966 HD domain AF2641_RS07525 PF13649 Methyltransferase domain AF2641_RS07530 PF14748 Pyrroline-5-carboxylate reductase dimerisation AF2641_RS07530 PF03807 NADP oxidoreductase coenzyme F420-dependent AF2641_RS07535 PF10531 SLBB domain AF2641_RS07540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AF2641_RS07545 PF03772 Competence protein AF2641_RS07545 PF13567 Domain of unknown function (DUF4131) AF2641_RS07545 PF00753 Metallo-beta-lactamase superfamily AF2641_RS07550 PF14141 YqzM-like protein AF2641_RS07555 PF06144 DNA polymerase III, delta subunit AF2641_RS07560 PF00027 Cyclic nucleotide-binding domain AF2641_RS07560 PF13545 Crp-like helix-turn-helix domain AF2641_RS07565 PF01649 Ribosomal protein S20 AF2641_RS07570 PF03418 Germination protease AF2641_RS07575 PF07454 Stage II sporulation protein P (SpoIIP) AF2641_RS07585 PF03144 Elongation factor Tu domain 2 AF2641_RS07585 PF00009 Elongation factor Tu GTP binding domain AF2641_RS07585 PF00679 Elongation factor G C-terminus AF2641_RS07585 PF06421 GTP-binding protein LepA C-terminus AF2641_RS07590 PF06969 HemN C-terminal domain AF2641_RS07590 PF04055 Radical SAM superfamily AF2641_RS07595 PF01628 HrcA protein C terminal domain AF2641_RS07600 PF01025 GrpE AF2641_RS07605 PF00012 Hsp70 protein AF2641_RS07610 PF00226 DnaJ domain AF2641_RS07610 PF00684 DnaJ central domain AF2641_RS07610 PF01556 DnaJ C terminal domain AF2641_RS07620 PF04452 RNA methyltransferase AF2641_RS07625 PF04055 Radical SAM superfamily AF2641_RS07625 PF00919 Uncharacterized protein family UPF0004 AF2641_RS07625 PF01938 TRAM domain AF2641_RS07630 PF01165 Ribosomal protein S21 AF2641_RS07635 PF09424 Yqey-like protein AF2641_RS07640 PF01957 NfeD-like C-terminal, partner-binding AF2641_RS07640 PF01972 Serine dehydrogenase proteinase AF2641_RS07645 PF12127 SigmaW regulon antibacterial AF2641_RS07655 PF07873 YabP family AF2641_RS07660 PF06898 Putative stage IV sporulation protein YqfD AF2641_RS07665 PF02562 PhoH-like protein AF2641_RS07670 PF02130 Uncharacterized protein family UPF0054 AF2641_RS07675 PF01219 Prokaryotic diacylglycerol kinase AF2641_RS07680 PF01926 50S ribosome-binding GTPase AF2641_RS07680 PF07650 KH domain AF2641_RS07685 PF14006 YqzL-like protein AF2641_RS07690 PF02565 Recombination protein O C terminal AF2641_RS07690 PF11967 Recombination protein O N terminal AF2641_RS07695 PF08279 HTH domain AF2641_RS07695 PF00571 CBS domain AF2641_RS07700 PF03618 Kinase/pyrophosphorylase AF2641_RS07705 PF08275 DNA primase catalytic core, N-terminal domain AF2641_RS07705 PF10410 DnaB-helicase binding domain of primase AF2641_RS07705 PF01807 CHC2 zinc finger AF2641_RS07710 PF04545 Sigma-70, region 4 AF2641_RS07710 PF04539 Sigma-70 region 3 AF2641_RS07710 PF04542 Sigma-70 region 2 AF2641_RS07710 PF00140 Sigma-70 factor, region 1.2 AF2641_RS07710 PF03979 Sigma-70 factor, region 1.1 AF2641_RS07720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AF2641_RS07725 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AF2641_RS07730 PF01784 NIF3 (NGG1p interacting factor 3) AF2641_RS07735 PF02401 LytB protein AF2641_RS07745 PF00271 Helicase conserved C-terminal domain AF2641_RS07745 PF00270 DEAD/DEAH box helicase AF2641_RS07750 PF01261 Xylose isomerase-like TIM barrel AF2641_RS07760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AF2641_RS07760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AF2641_RS07765 PF00005 ABC transporter AF2641_RS07770 PF00950 ABC 3 transport family AF2641_RS07775 PF01475 Ferric uptake regulator family AF2641_RS07790 PF04551 GcpE protein AF2641_RS07800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS07800 PF02743 Cache domain AF2641_RS07800 PF00672 HAMP domain AF2641_RS07805 PF06691 Protein of unknown function (DUF1189) AF2641_RS07815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AF2641_RS07815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AF2641_RS07820 PF07690 Major Facilitator Superfamily AF2641_RS07825 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS07825 PF03717 Penicillin-binding Protein dimerisation domain AF2641_RS07830 PF12849 PBP superfamily domain AF2641_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS07845 PF00005 ABC transporter AF2641_RS07850 PF01895 PhoU domain AF2641_RS07865 PF00483 Nucleotidyl transferase AF2641_RS07870 PF00471 Ribosomal protein L33 AF2641_RS07875 PF01812 5-formyltetrahydrofolate cyclo-ligase family AF2641_RS07880 PF00056 lactate/malate dehydrogenase, NAD binding domain AF2641_RS07880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AF2641_RS07890 PF01694 Rhomboid family AF2641_RS07900 PF03323 Bacillus/Clostridium GerA spore germination protein AF2641_RS07905 PF06014 Bacterial protein of unknown function (DUF910) AF2641_RS07910 PF00480 ROK family AF2641_RS07915 PF00884 Sulfatase AF2641_RS07920 PF01476 LysM domain AF2641_RS07920 PF00246 Zinc carboxypeptidase AF2641_RS07930 PF00753 Metallo-beta-lactamase superfamily AF2641_RS07940 PF11117 Protein of unknown function (DUF2626) AF2641_RS07950 PF03960 ArsC family AF2641_RS07955 PF00437 Type II/IV secretion system protein AF2641_RS07960 PF00482 Type II secretion system (T2SS), protein F AF2641_RS07965 PF07963 Prokaryotic N-terminal methylation motif AF2641_RS07970 PF07963 Prokaryotic N-terminal methylation motif AF2641_RS07990 PF01202 Shikimate kinase AF2641_RS07995 PF14038 YqzE-like protein AF2641_RS08000 PF11079 Bacterial protein YqhG of unknown function AF2641_RS08005 PF00271 Helicase conserved C-terminal domain AF2641_RS08005 PF00176 SNF2 family N-terminal domain AF2641_RS08010 PF08669 Glycine cleavage T-protein C-terminal barrel domain AF2641_RS08010 PF01571 Aminomethyltransferase folate-binding domain AF2641_RS08015 PF02347 Glycine cleavage system P-protein AF2641_RS08020 PF02347 Glycine cleavage system P-protein AF2641_RS08025 PF00581 Rhodanese-like domain AF2641_RS08030 PF03099 Biotin/lipoate A/B protein ligase family AF2641_RS08035 PF02867 Ribonucleotide reductase, barrel domain AF2641_RS08035 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AF2641_RS08040 PF03477 ATP cone domain AF2641_RS08040 PF02867 Ribonucleotide reductase, barrel domain AF2641_RS08040 PF00317 Ribonucleotide reductase, all-alpha domain AF2641_RS08050 PF01325 Iron dependent repressor, N-terminal DNA binding domain AF2641_RS08050 PF02742 Iron dependent repressor, metal binding and dimerisation domain AF2641_RS08055 PF01734 Patatin-like phospholipase AF2641_RS08065 PF07136 Protein of unknown function (DUF1385) AF2641_RS08070 PF11085 Conserved membrane protein YqhR AF2641_RS08075 PF01220 Dehydroquinase class II AF2641_RS08080 PF00557 Metallopeptidase family M24 AF2641_RS08080 PF01321 Creatinase/Prolidase N-terminal domain AF2641_RS08085 PF08207 Elongation factor P (EF-P) KOW-like domain AF2641_RS08085 PF01132 Elongation factor P (EF-P) OB domain AF2641_RS08085 PF09285 Elongation factor P, C-terminal AF2641_RS08100 PF10942 Protein of unknown function (DUF2619) AF2641_RS08110 PF09548 Stage III sporulation protein AB (spore_III_AB) AF2641_RS08115 PF06686 Stage III sporulation protein AC/AD protein family AF2641_RS08120 PF06686 Stage III sporulation protein AC/AD protein family AF2641_RS08125 PF09546 Stage III sporulation protein AE (spore_III_AE) AF2641_RS08130 PF09581 Stage III sporulation protein AF (Spore_III_AF) AF2641_RS08140 PF12685 SpoIIIAH-like protein AF2641_RS08145 PF00364 Biotin-requiring enzyme AF2641_RS08150 PF02785 Biotin carboxylase C-terminal domain AF2641_RS08150 PF00289 Biotin carboxylase, N-terminal domain AF2641_RS08150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF2641_RS08155 PF03780 Asp23 family, cell envelope-related function AF2641_RS08160 PF01029 NusB family AF2641_RS08165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AF2641_RS08165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AF2641_RS08170 PF02601 Exonuclease VII, large subunit AF2641_RS08170 PF13742 OB-fold nucleic acid binding domain AF2641_RS08175 PF02609 Exonuclease VII small subunit AF2641_RS08180 PF00348 Polyprenyl synthetase AF2641_RS08185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AF2641_RS08185 PF02780 Transketolase, C-terminal domain AF2641_RS08185 PF02779 Transketolase, pyrimidine binding domain AF2641_RS08190 PF01728 FtsJ-like methyltransferase AF2641_RS08190 PF01479 S4 domain AF2641_RS08195 PF02863 Arginine repressor, C-terminal domain AF2641_RS08195 PF01316 Arginine repressor, DNA binding domain AF2641_RS08200 PF13476 AAA domain AF2641_RS08205 PF05580 SpoIVB peptidase S55 AF2641_RS08205 PF17820 PDZ domain AF2641_RS08210 PF08769 Sporulation initiation factor Spo0A C terminal AF2641_RS08210 PF00072 Response regulator receiver domain AF2641_RS08215 PF14174 YycC-like protein AF2641_RS08220 PF03009 Glycerophosphoryl diester phosphodiesterase family AF2641_RS08225 PF11118 Protein of unknown function (DUF2627) AF2641_RS08230 PF00989 PAS fold AF2641_RS08230 PF02954 Bacterial regulatory protein, Fis family AF2641_RS08230 PF00158 Sigma-54 interaction domain AF2641_RS08235 PF01515 Phosphate acetyl/butaryl transferase AF2641_RS08240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AF2641_RS08240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AF2641_RS08245 PF00871 Acetokinase family AF2641_RS08250 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS08250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF2641_RS08255 PF00676 Dehydrogenase E1 component AF2641_RS08260 PF02779 Transketolase, pyrimidine binding domain AF2641_RS08260 PF02780 Transketolase, C-terminal domain AF2641_RS08265 PF02817 e3 binding domain AF2641_RS08265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AF2641_RS08265 PF00364 Biotin-requiring enzyme AF2641_RS08270 PF01642 Methylmalonyl-CoA mutase AF2641_RS08275 PF02310 B12 binding domain AF2641_RS08275 PF01642 Methylmalonyl-CoA mutase AF2641_RS08285 PF11728 Putative aromatic acid exporter C-terminal domain AF2641_RS08285 PF06081 Aromatic acid exporter family member 1 AF2641_RS08290 PF03734 L,D-transpeptidase catalytic domain AF2641_RS08300 PF01039 Carboxyl transferase domain AF2641_RS08310 PF07687 Peptidase dimerisation domain AF2641_RS08310 PF01546 Peptidase family M20/M25/M40 AF2641_RS08315 PF01584 CheW-like domain AF2641_RS08320 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AF2641_RS08320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AF2641_RS08325 PF04199 Putative cyclase AF2641_RS08330 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AF2641_RS08330 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AF2641_RS08335 PF12706 Beta-lactamase superfamily domain AF2641_RS08335 PF00753 Metallo-beta-lactamase superfamily AF2641_RS08365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AF2641_RS08370 PF03807 NADP oxidoreductase coenzyme F420-dependent AF2641_RS08370 PF14748 Pyrroline-5-carboxylate reductase dimerisation AF2641_RS08375 PF00753 Metallo-beta-lactamase superfamily AF2641_RS08380 PF00106 short chain dehydrogenase AF2641_RS08385 PF01521 Iron-sulphur cluster biosynthesis AF2641_RS08395 PF10827 Protein of unknown function (DUF2552) AF2641_RS08405 PF00248 Aldo/keto reductase family AF2641_RS08410 PF00293 NUDIX domain AF2641_RS08415 PF01944 Stage II sporulation protein M AF2641_RS08425 PF01385 Probable transposase AF2641_RS08425 PF12323 Helix-turn-helix domain AF2641_RS08425 PF07282 Putative transposase DNA-binding domain AF2641_RS08430 PF01475 Ferric uptake regulator family AF2641_RS08435 PF14004 Protein of unknown function (DUF4227) AF2641_RS08440 PF02899 Phage integrase, N-terminal SAM-like domain AF2641_RS08440 PF00589 Phage integrase family AF2641_RS08445 PF01676 Metalloenzyme superfamily AF2641_RS08450 PF01048 Phosphorylase superfamily AF2641_RS08455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AF2641_RS08455 PF02885 Glycosyl transferase family, helical bundle domain AF2641_RS08455 PF00591 Glycosyl transferase family, a/b domain AF2641_RS08460 PF00768 D-alanyl-D-alanine carboxypeptidase AF2641_RS08460 PF07943 Penicillin-binding protein 5, C-terminal domain AF2641_RS08465 PF01740 STAS domain AF2641_RS08470 PF13581 Histidine kinase-like ATPase domain AF2641_RS08475 PF04545 Sigma-70, region 4 AF2641_RS08475 PF04539 Sigma-70 region 3 AF2641_RS08475 PF04542 Sigma-70 region 2 AF2641_RS08480 PF12164 Stage V sporulation protein AA AF2641_RS08485 PF13782 Stage V sporulation protein AB AF2641_RS08495 PF07451 Stage V sporulation protein AD (SpoVAD) AF2641_RS08500 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AF2641_RS08505 PF14097 Stage V sporulation protein AE1 AF2641_RS08510 PF03323 Bacillus/Clostridium GerA spore germination protein AF2641_RS08515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AF2641_RS08515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AF2641_RS08520 PF06207 Protein of unknown function (DUF1002) AF2641_RS08525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AF2641_RS08530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AF2641_RS08530 PF01872 RibD C-terminal domain AF2641_RS08535 PF00677 Lumazine binding domain AF2641_RS08540 PF00925 GTP cyclohydrolase II AF2641_RS08540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AF2641_RS08545 PF00885 6,7-dimethyl-8-ribityllumazine synthase AF2641_RS08555 PF03745 Domain of unknown function (DUF309) AF2641_RS08560 PF02616 Segregation and condensation protein ScpA AF2641_RS08565 PF04079 Segregation and condensation complex subunit ScpB AF2641_RS08585 PF18603 L-amino acid ligase C-terminal domain 2 AF2641_RS08585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF2641_RS08590 PF01820 D-ala D-ala ligase N-terminus AF2641_RS08590 PF07478 D-ala D-ala ligase C-terminus AF2641_RS08595 PF01022 Bacterial regulatory protein, arsR family AF2641_RS08610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AF2641_RS08610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AF2641_RS08615 PF00768 D-alanyl-D-alanine carboxypeptidase AF2641_RS08615 PF07943 Penicillin-binding protein 5, C-terminal domain AF2641_RS08620 PF07670 Nucleoside recognition AF2641_RS08625 PF07670 Nucleoside recognition AF2641_RS08635 PF01479 S4 domain AF2641_RS08635 PF00849 RNA pseudouridylate synthase AF2641_RS08640 PF00578 AhpC/TSA family AF2641_RS08645 PF05140 ResB-like family AF2641_RS08650 PF01578 Cytochrome C assembly protein AF2641_RS08655 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS08655 PF00072 Response regulator receiver domain AF2641_RS08660 PF00672 HAMP domain AF2641_RS08660 PF18698 Histidine kinase sensor domain AF2641_RS08660 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS08660 PF00989 PAS fold AF2641_RS08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS08665 PF01497 Periplasmic binding protein AF2641_RS08670 PF01032 FecCD transport family AF2641_RS08675 PF00005 ABC transporter AF2641_RS08680 PF03186 CobD/Cbib protein AF2641_RS08685 PF00155 Aminotransferase class I and II AF2641_RS08695 PF02654 Cobalamin-5-phosphate synthase AF2641_RS08710 PF01923 Cobalamin adenosyltransferase AF2641_RS08730 PF02811 PHP domain AF2641_RS08735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AF2641_RS08735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AF2641_RS08735 PF01842 ACT domain AF2641_RS08740 PF00719 Inorganic pyrophosphatase AF2641_RS08750 PF14493 Helix-turn-helix domain AF2641_RS08755 PF00270 DEAD/DEAH box helicase AF2641_RS08755 PF00271 Helicase conserved C-terminal domain AF2641_RS08760 PF02517 CPBP intramembrane metalloprotease AF2641_RS08770 PF10864 Protein of unknown function (DUF2663) AF2641_RS08775 PF05067 Manganese containing catalase AF2641_RS08780 PF12652 CotJB protein AF2641_RS08785 PF11007 Spore coat associated protein JA (CotJA) AF2641_RS08795 PF00149 Calcineurin-like phosphoesterase AF2641_RS08800 PF13411 MerR HTH family regulatory protein AF2641_RS08805 PF05389 Negative regulator of genetic competence (MecA) AF2641_RS08810 PF02585 GlcNAc-PI de-N-acetylase AF2641_RS08815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AF2641_RS08815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AF2641_RS08830 PF00202 Aminotransferase class-III AF2641_RS08835 PF14620 YpeB sporulation AF2641_RS08835 PF03413 Peptidase propeptide and YPEB domain AF2641_RS08840 PF07486 Cell Wall Hydrolase AF2641_RS08840 PF01471 Putative peptidoglycan binding domain AF2641_RS08845 PF13367 PrsW family intramembrane metalloprotease AF2641_RS08850 PF12945 Flagellar protein YcgR AF2641_RS08850 PF07238 PilZ domain AF2641_RS08860 PF02224 Cytidylate kinase AF2641_RS08865 PF01553 Acyltransferase AF2641_RS08870 PF00575 S1 RNA binding domain AF2641_RS08875 PF01070 FMN-dependent dehydrogenase AF2641_RS08880 PF14140 YpzI-like protein AF2641_RS08890 PF14045 YIEGIA protein AF2641_RS08900 PF01926 50S ribosome-binding GTPase AF2641_RS08900 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AF2641_RS08905 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AF2641_RS08905 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AF2641_RS08910 PF10966 Protein of unknown function (DUF2768) AF2641_RS08920 PF09547 Stage IV sporulation protein A (spore_IV_A) AF2641_RS08925 PF00216 Bacterial DNA-binding protein AF2641_RS08930 PF01227 GTP cyclohydrolase I AF2641_RS08935 PF02081 Tryptophan RNA-binding attenuator protein AF2641_RS08940 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AF2641_RS08945 PF01209 ubiE/COQ5 methyltransferase family AF2641_RS08950 PF00348 Polyprenyl synthetase AF2641_RS08955 PF00334 Nucleoside diphosphate kinase AF2641_RS08960 PF03705 CheR methyltransferase, all-alpha domain AF2641_RS08960 PF01739 CheR methyltransferase, SAM binding domain AF2641_RS08965 PF01264 Chorismate synthase AF2641_RS08970 PF01761 3-dehydroquinate synthase AF2641_RS08975 PF07736 Chorismate mutase type I AF2641_RS08980 PF04715 Anthranilate synthase component I, N terminal region AF2641_RS08980 PF00425 chorismate binding enzyme AF2641_RS08985 PF00591 Glycosyl transferase family, a/b domain AF2641_RS08985 PF02885 Glycosyl transferase family, helical bundle domain AF2641_RS08990 PF00218 Indole-3-glycerol phosphate synthase AF2641_RS08995 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AF2641_RS09000 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS09005 PF00290 Tryptophan synthase alpha chain AF2641_RS09010 PF00155 Aminotransferase class I and II AF2641_RS09015 PF01842 ACT domain AF2641_RS09015 PF02153 Prephenate dehydrogenase AF2641_RS09020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AF2641_RS09030 PF08858 IDEAL domain AF2641_RS09030 PF08864 UPF0302 domain AF2641_RS09035 PF10673 Protein of unknown function (DUF2487) AF2641_RS09040 PF00355 Rieske [2Fe-2S] domain AF2641_RS09045 PF00033 Cytochrome b/b6/petB AF2641_RS09050 PF00032 Cytochrome b(C-terminal)/b6/petD AF2641_RS09050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AF2641_RS09055 PF07187 Protein of unknown function (DUF1405) AF2641_RS09060 PF09577 Sporulation protein YpjB (SpoYpjB) AF2641_RS09065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AF2641_RS09065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AF2641_RS09070 PF03819 MazG nucleotide pyrophosphohydrolase domain AF2641_RS09075 PF01113 Dihydrodipicolinate reductase, N-terminus AF2641_RS09075 PF05173 Dihydrodipicolinate reductase, C-terminus AF2641_RS09080 PF02142 MGS-like domain AF2641_RS09085 PF02585 GlcNAc-PI de-N-acetylase AF2641_RS09090 PF00534 Glycosyl transferases group 1 AF2641_RS09090 PF13439 Glycosyltransferase Family 4 AF2641_RS09095 PF01743 Poly A polymerase head domain AF2641_RS09095 PF12627 Probable RNA and SrmB- binding site of polymerase A AF2641_RS09095 PF13735 tRNA nucleotidyltransferase domain 2 putative AF2641_RS09100 PF08279 HTH domain AF2641_RS09100 PF02237 Biotin protein ligase C terminal domain AF2641_RS09100 PF03099 Biotin/lipoate A/B protein ligase family AF2641_RS09105 PF02548 Ketopantoate hydroxymethyltransferase AF2641_RS09110 PF02569 Pantoate-beta-alanine ligase AF2641_RS09115 PF02261 Aspartate decarboxylase AF2641_RS09120 PF00929 Exonuclease AF2641_RS09120 PF13307 Helicase C-terminal domain AF2641_RS09120 PF04851 Type III restriction enzyme, res subunit AF2641_RS09130 PF14084 Protein of unknown function (DUF4264) AF2641_RS09140 PF00155 Aminotransferase class I and II AF2641_RS09145 PF00152 tRNA synthetases class II (D, K and N) AF2641_RS09145 PF01336 OB-fold nucleic acid binding domain AF2641_RS09150 PF07261 Replication initiation and membrane attachment AF2641_RS09155 PF10576 Iron-sulfur binding domain of endonuclease III AF2641_RS09155 PF00633 Helix-hairpin-helix motif AF2641_RS09155 PF00730 HhH-GPD superfamily base excision DNA repair protein AF2641_RS09165 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS09165 PF00912 Transglycosylase AF2641_RS09170 PF03838 Recombination protein U AF2641_RS09205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AF2641_RS09205 PF01266 FAD dependent oxidoreductase AF2641_RS09210 PF12787 EcsC protein family AF2641_RS09215 PF00011 Hsp20/alpha crystallin family AF2641_RS09230 PF07694 5TMR of 5TMR-LYT AF2641_RS09230 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS09235 PF02073 Thermophilic metalloprotease (M29) AF2641_RS09245 PF02595 Glycerate kinase family AF2641_RS09250 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS09250 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS09250 PF00563 EAL domain AF2641_RS09255 PF00005 ABC transporter AF2641_RS09260 PF01497 Periplasmic binding protein AF2641_RS09265 PF01032 FecCD transport family AF2641_RS09270 PF01032 FecCD transport family AF2641_RS09275 PF00155 Aminotransferase class I and II AF2641_RS09280 PF00561 alpha/beta hydrolase fold AF2641_RS09285 PF13847 Methyltransferase domain AF2641_RS09290 PF02675 S-adenosylmethionine decarboxylase AF2641_RS09295 PF00999 Sodium/hydrogen exchanger family AF2641_RS09295 PF02080 TrkA-C domain AF2641_RS09295 PF02254 TrkA-N domain AF2641_RS09310 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS09310 PF00072 Response regulator receiver domain AF2641_RS09315 PF18719 ArlS sensor domain AF2641_RS09315 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS09320 PF13411 MerR HTH family regulatory protein AF2641_RS09320 PF00145 C-5 cytosine-specific DNA methylase AF2641_RS09325 PF00106 short chain dehydrogenase AF2641_RS09340 PF12323 Helix-turn-helix domain AF2641_RS09340 PF01385 Probable transposase AF2641_RS09340 PF07282 Putative transposase DNA-binding domain AF2641_RS09375 PF00266 Aminotransferase class-V AF2641_RS09430 PF07687 Peptidase dimerisation domain AF2641_RS09430 PF01546 Peptidase family M20/M25/M40 AF2641_RS09450 PF00141 Peroxidase AF2641_RS09455 PF02673 Bacitracin resistance protein BacA AF2641_RS09460 PF00248 Aldo/keto reductase family AF2641_RS09465 PF01522 Polysaccharide deacetylase AF2641_RS09480 PF08244 Glycosyl hydrolases family 32 C terminal AF2641_RS09480 PF00251 Glycosyl hydrolases family 32 N-terminal domain AF2641_RS09510 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS09510 PF00672 HAMP domain AF2641_RS09510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS09515 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS09515 PF00072 Response regulator receiver domain AF2641_RS09530 PF02583 Metal-sensitive transcriptional repressor AF2641_RS09535 PF00403 Heavy-metal-associated domain AF2641_RS09540 PF00403 Heavy-metal-associated domain AF2641_RS09565 PF00403 Heavy-metal-associated domain AF2641_RS09570 PF07732 Multicopper oxidase AF2641_RS09570 PF07731 Multicopper oxidase AF2641_RS09570 PF00394 Multicopper oxidase AF2641_RS09575 PF00733 Asparagine synthase AF2641_RS09575 PF13537 Glutamine amidotransferase domain AF2641_RS09590 PF03441 FAD binding domain of DNA photolyase AF2641_RS09590 PF00875 DNA photolyase AF2641_RS09595 PF00171 Aldehyde dehydrogenase family AF2641_RS09605 PF04138 GtrA-like protein AF2641_RS09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AF2641_RS09610 PF03466 LysR substrate binding domain AF2641_RS09615 PF01493 GXGXG motif AF2641_RS09615 PF04898 Glutamate synthase central domain AF2641_RS09615 PF00310 Glutamine amidotransferases class-II AF2641_RS09615 PF01645 Conserved region in glutamate synthase AF2641_RS09620 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AF2641_RS09620 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS09630 PF00920 Dehydratase family AF2641_RS09640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS09640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF2641_RS09640 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS09645 PF02515 CoA-transferase family III AF2641_RS09650 PF00202 Aminotransferase class-III AF2641_RS09655 PF00171 Aldehyde dehydrogenase family AF2641_RS09660 PF13520 Amino acid permease AF2641_RS09665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AF2641_RS09665 PF00205 Thiamine pyrophosphate enzyme, central domain AF2641_RS09665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF2641_RS09670 PF00171 Aldehyde dehydrogenase family AF2641_RS09675 PF03435 Saccharopine dehydrogenase NADP binding domain AF2641_RS09675 PF16653 Saccharopine dehydrogenase C-terminal domain AF2641_RS09680 PF01012 Electron transfer flavoprotein domain AF2641_RS09685 PF01012 Electron transfer flavoprotein domain AF2641_RS09685 PF00766 Electron transfer flavoprotein FAD-binding domain AF2641_RS09710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AF2641_RS09710 PF01367 5'-3' exonuclease, C-terminal SAM fold AF2641_RS09720 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AF2641_RS09725 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AF2641_RS09725 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AF2641_RS09730 PF00082 Subtilase family AF2641_RS09745 PF13610 DDE domain AF2641_RS09755 PF01367 5'-3' exonuclease, C-terminal SAM fold AF2641_RS09755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AF2641_RS09760 PF00171 Aldehyde dehydrogenase family AF2641_RS09765 PF01472 PUA domain AF2641_RS09765 PF00696 Amino acid kinase family AF2641_RS09775 PF00005 ABC transporter AF2641_RS09775 PF13732 Domain of unknown function (DUF4162) AF2641_RS09795 PF00501 AMP-binding enzyme AF2641_RS09795 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS09800 PF00376 MerR family regulatory protein AF2641_RS09800 PF09278 MerR, DNA binding AF2641_RS09805 PF00501 AMP-binding enzyme AF2641_RS09805 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS09810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS09810 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS09810 PF18158 Adaptive response protein AidB N-terminal domain AF2641_RS09815 PF03006 Haemolysin-III related AF2641_RS09835 PF07670 Nucleoside recognition AF2641_RS09845 PF13520 Amino acid permease AF2641_RS09850 PF01297 Zinc-uptake complex component A periplasmic AF2641_RS09855 PF00005 ABC transporter AF2641_RS09860 PF00950 ABC 3 transport family AF2641_RS09865 PF00950 ABC 3 transport family AF2641_RS09870 PF07690 Major Facilitator Superfamily AF2641_RS09885 PF05816 Toxic anion resistance protein (TelA) AF2641_RS09895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS09895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF2641_RS09905 PF07690 Major Facilitator Superfamily AF2641_RS09910 PF02386 Cation transport protein AF2641_RS09920 PF17202 Single cache domain 3 AF2641_RS09920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS09920 PF00672 HAMP domain AF2641_RS09930 PF02743 Cache domain AF2641_RS09930 PF00672 HAMP domain AF2641_RS09930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS09930 PF06580 Histidine kinase AF2641_RS09935 PF04397 LytTr DNA-binding domain AF2641_RS09935 PF00072 Response regulator receiver domain AF2641_RS09940 PF13407 Periplasmic binding protein domain AF2641_RS09945 PF00005 ABC transporter AF2641_RS09950 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS09955 PF13458 Periplasmic binding protein AF2641_RS09960 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS09965 PF11862 Domain of unknown function (DUF3382) AF2641_RS09965 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS09970 PF00005 ABC transporter AF2641_RS09970 PF12399 Branched-chain amino acid ATP-binding cassette transporter AF2641_RS09975 PF00005 ABC transporter AF2641_RS09980 PF13378 Enolase C-terminal domain-like AF2641_RS09980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AF2641_RS09990 PF07293 Protein of unknown function (DUF1450) AF2641_RS10015 PF00583 Acetyltransferase (GNAT) family AF2641_RS10020 PF00583 Acetyltransferase (GNAT) family AF2641_RS10020 PF00795 Carbon-nitrogen hydrolase AF2641_RS10025 PF00255 Glutathione peroxidase AF2641_RS10030 PF01636 Phosphotransferase enzyme family AF2641_RS10035 PF13439 Glycosyltransferase Family 4 AF2641_RS10035 PF00534 Glycosyl transferases group 1 AF2641_RS10045 PF00664 ABC transporter transmembrane region AF2641_RS10045 PF00005 ABC transporter AF2641_RS10050 PF00005 ABC transporter AF2641_RS10050 PF00664 ABC transporter transmembrane region AF2641_RS10055 PF12706 Beta-lactamase superfamily domain AF2641_RS10070 PF00909 Ammonium Transporter Family AF2641_RS10080 PF00929 Exonuclease AF2641_RS10080 PF04851 Type III restriction enzyme, res subunit AF2641_RS10080 PF13307 Helicase C-terminal domain AF2641_RS10085 PF01022 Bacterial regulatory protein, arsR family AF2641_RS10090 PF00403 Heavy-metal-associated domain AF2641_RS10095 PF00563 EAL domain AF2641_RS10095 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS10095 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS10115 PF00005 ABC transporter AF2641_RS10120 PF00300 Histidine phosphatase superfamily (branch 1) AF2641_RS10125 PF05901 Excalibur calcium-binding domain AF2641_RS10125 PF00565 Staphylococcal nuclease homologue AF2641_RS10130 PF03063 Prismane/CO dehydrogenase family AF2641_RS10135 PF02110 Hydroxyethylthiazole kinase family AF2641_RS10140 PF02581 Thiamine monophosphate synthase AF2641_RS10145 PF00378 Enoyl-CoA hydratase/isomerase AF2641_RS10150 PF13426 PAS domain AF2641_RS10150 PF07228 Stage II sporulation protein E (SpoIIE) AF2641_RS10170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS10175 PF11122 Inner spore coat protein D AF2641_RS10180 PF05103 DivIVA protein AF2641_RS10190 PF00563 EAL domain AF2641_RS10190 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS10190 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS10195 PF02926 THUMP domain AF2641_RS10195 PF01170 Putative RNA methylase family UPF0020 AF2641_RS10200 PF13307 Helicase C-terminal domain AF2641_RS10205 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AF2641_RS10210 PF00115 Cytochrome C and Quinol oxidase polypeptide I AF2641_RS10215 PF09125 Cytochrome C oxidase subunit II, transmembrane AF2641_RS10215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AF2641_RS10235 PF00195 Chalcone and stilbene synthases, N-terminal domain AF2641_RS10235 PF02797 Chalcone and stilbene synthases, C-terminal domain AF2641_RS10240 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AF2641_RS10245 PF00350 Dynamin family AF2641_RS10250 PF10752 Protein of unknown function (DUF2533) AF2641_RS10260 PF00578 AhpC/TSA family AF2641_RS10265 PF13040 Fur-regulated basic protein B AF2641_RS10270 PF08177 Small acid-soluble spore protein N family AF2641_RS10280 PF03061 Thioesterase superfamily AF2641_RS10285 PF01521 Iron-sulphur cluster biosynthesis AF2641_RS10300 PF01494 FAD binding domain AF2641_RS10305 PF06968 Biotin and Thiamin Synthesis associated domain AF2641_RS10305 PF04055 Radical SAM superfamily AF2641_RS10315 PF14162 YozD-like protein AF2641_RS10320 PF07070 SpoOM protein AF2641_RS10325 PF14191 YodL-like AF2641_RS10335 PF01048 Phosphorylase superfamily AF2641_RS10340 PF02557 D-alanyl-D-alanine carboxypeptidase AF2641_RS10350 PF13726 Na+-H+ antiporter family AF2641_RS10350 PF03553 Na+/H+ antiporter family AF2641_RS10355 PF01545 Cation efflux family AF2641_RS10355 PF16916 Dimerisation domain of Zinc Transporter AF2641_RS10360 PF00892 EamA-like transporter family AF2641_RS10375 PF01554 MatE AF2641_RS10380 PF01235 Sodium:alanine symporter family AF2641_RS10385 PF00989 PAS fold AF2641_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS10385 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS10390 PF10842 Protein of unknown function (DUF2642) AF2641_RS10395 PF05067 Manganese containing catalase AF2641_RS10400 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS10400 PF13291 ACT domain AF2641_RS10420 PF00392 Bacterial regulatory proteins, gntR family AF2641_RS10425 PF00005 ABC transporter AF2641_RS10435 PF12392 Collagenase AF2641_RS10435 PF01136 Peptidase family U32 AF2641_RS10445 PF00313 'Cold-shock' DNA-binding domain AF2641_RS10450 PF00120 Glutamine synthetase, catalytic domain AF2641_RS10450 PF03951 Glutamine synthetase, beta-Grasp domain AF2641_RS10460 PF00005 ABC transporter AF2641_RS10465 PF12679 ABC-2 family transporter protein AF2641_RS10470 PF00293 NUDIX domain AF2641_RS10485 PF01693 Caulimovirus viroplasmin AF2641_RS10490 PF07683 Cobalamin synthesis protein cobW C-terminal domain AF2641_RS10490 PF02492 CobW/HypB/UreG, nucleotide-binding domain AF2641_RS10495 PF01022 Bacterial regulatory protein, arsR family AF2641_RS10500 PF02040 Arsenical pump membrane protein AF2641_RS10505 PF01451 Low molecular weight phosphotyrosine protein phosphatase AF2641_RS10515 PF00005 ABC transporter AF2641_RS10515 PF00664 ABC transporter transmembrane region AF2641_RS10525 PF00005 ABC transporter AF2641_RS10545 PF13411 MerR HTH family regulatory protein AF2641_RS10560 PF00403 Heavy-metal-associated domain AF2641_RS10565 PF00403 Heavy-metal-associated domain AF2641_RS10565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF2641_RS10565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS10570 PF01751 Toprim domain AF2641_RS10570 PF01131 DNA topoisomerase AF2641_RS10585 PF01235 Sodium:alanine symporter family AF2641_RS10590 PF00092 von Willebrand factor type A domain AF2641_RS10595 PF07728 AAA domain (dynein-related subfamily) AF2641_RS10600 PF02583 Metal-sensitive transcriptional repressor AF2641_RS10605 PF02334 Replication terminator protein AF2641_RS10610 PF00551 Formyl transferase AF2641_RS10610 PF01842 ACT domain AF2641_RS10615 PF01226 Formate/nitrite transporter AF2641_RS10620 PF17284 Spermidine synthase tetramerisation domain AF2641_RS10625 PF00471 Ribosomal protein L33 AF2641_RS10630 PF07702 UTRA domain AF2641_RS10630 PF00392 Bacterial regulatory proteins, gntR family AF2641_RS10635 PF16657 Maltogenic Amylase, C-terminal domain AF2641_RS10635 PF00128 Alpha amylase, catalytic domain AF2641_RS10640 PF02378 Phosphotransferase system, EIIC AF2641_RS10640 PF00367 phosphotransferase system, EIIB AF2641_RS10650 PF03989 DNA gyrase C-terminal domain, beta-propeller AF2641_RS10650 PF00521 DNA gyrase/topoisomerase IV, subunit A AF2641_RS10655 PF00986 DNA gyrase B subunit, carboxyl terminus AF2641_RS10655 PF00204 DNA gyrase B AF2641_RS10655 PF01751 Toprim domain AF2641_RS10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS10660 PF13380 CoA binding domain AF2641_RS10665 PF02660 Glycerol-3-phosphate acyltransferase AF2641_RS10670 PF01189 16S rRNA methyltransferase RsmB/F AF2641_RS10670 PF17126 RsmF rRNA methyltransferase first C-terminal domain AF2641_RS10670 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AF2641_RS10680 PF13472 GDSL-like Lipase/Acylhydrolase family AF2641_RS10685 PF02630 SCO1/SenC AF2641_RS10690 PF02645 Uncharacterised protein, DegV family COG1307 AF2641_RS10695 PF10751 Protein of unknown function (DUF2535) AF2641_RS10700 PF00585 C-terminal regulatory domain of Threonine dehydratase AF2641_RS10700 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS10705 PF00186 Dihydrofolate reductase AF2641_RS10710 PF00303 Thymidylate synthase AF2641_RS10715 PF00586 AIR synthase related protein, N-terminal domain AF2641_RS10715 PF02769 AIR synthase related protein, C-terminal domain AF2641_RS10720 PF01924 Hydrogenase formation hypA family AF2641_RS10725 PF01455 HupF/HypC family AF2641_RS10730 PF00708 Acylphosphatase AF2641_RS10730 PF17788 HypF Kae1-like domain AF2641_RS10730 PF01300 Telomere recombination AF2641_RS10730 PF07503 HypF finger AF2641_RS10735 PF02492 CobW/HypB/UreG, nucleotide-binding domain AF2641_RS10740 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AF2641_RS10750 PF01750 Hydrogenase maturation protease AF2641_RS10755 PF01292 Prokaryotic cytochrome b561 AF2641_RS10760 PF00374 Nickel-dependent hydrogenase AF2641_RS10765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AF2641_RS10765 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AF2641_RS10770 PF00902 Sec-independent protein translocase protein (TatC) AF2641_RS10775 PF02416 mttA/Hcf106 family AF2641_RS10785 PF00375 Sodium:dicarboxylate symporter family AF2641_RS10795 PF04445 Putative SAM-dependent methyltransferase AF2641_RS10800 PF06491 Disulphide isomerase AF2641_RS10805 PF04204 Homoserine O-succinyltransferase AF2641_RS10810 PF07690 Major Facilitator Superfamily AF2641_RS10820 PF01209 ubiE/COQ5 methyltransferase family AF2641_RS10825 PF03737 Aldolase/RraA AF2641_RS10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS10840 PF08447 PAS fold AF2641_RS10840 PF13426 PAS domain AF2641_RS10845 PF02602 Uroporphyrinogen-III synthase HemD AF2641_RS10850 PF13426 PAS domain AF2641_RS10850 PF00989 PAS fold AF2641_RS10850 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS10850 PF13188 PAS domain AF2641_RS10855 PF00258 Flavodoxin AF2641_RS10860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AF2641_RS10860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AF2641_RS10865 PF00294 pfkB family carbohydrate kinase AF2641_RS10880 PF01966 HD domain AF2641_RS10880 PF00072 Response regulator receiver domain AF2641_RS10885 PF17248 Family of unknown function (DUF5317) AF2641_RS10890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AF2641_RS10890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AF2641_RS10895 PF04309 Glycerol-3-phosphate responsive antiterminator AF2641_RS10900 PF01894 Uncharacterised protein family UPF0047 AF2641_RS10910 PF00313 'Cold-shock' DNA-binding domain AF2641_RS10930 PF02592 Putative vitamin uptake transporter AF2641_RS10940 PF02681 Divergent PAP2 family AF2641_RS10950 PF00330 Aconitase family (aconitate hydratase) AF2641_RS10950 PF00694 Aconitase C-terminal domain AF2641_RS10965 PF08179 Small acid-soluble spore protein P family AF2641_RS10970 PF11084 Protein of unknown function (DUF2621) AF2641_RS10975 PF07301 Protein of unknown function (DUF1453) AF2641_RS10980 PF00072 Response regulator receiver domain AF2641_RS10985 PF02683 Cytochrome C biogenesis protein transmembrane region AF2641_RS10990 PF03672 Uncharacterised protein family (UPF0154) AF2641_RS10995 PF02779 Transketolase, pyrimidine binding domain AF2641_RS10995 PF00456 Transketolase, thiamine diphosphate binding domain AF2641_RS10995 PF02780 Transketolase, C-terminal domain AF2641_RS11000 PF05979 Bacterial protein of unknown function (DUF896) AF2641_RS11005 PF00239 Resolvase, N terminal domain AF2641_RS11010 PF01476 LysM domain AF2641_RS11015 PF00717 Peptidase S24-like AF2641_RS11015 PF01726 LexA DNA binding domain AF2641_RS11020 PF03951 Glutamine synthetase, beta-Grasp domain AF2641_RS11020 PF00120 Glutamine synthetase, catalytic domain AF2641_RS11025 PF13411 MerR HTH family regulatory protein AF2641_RS11030 PF06838 Methionine gamma-lyase AF2641_RS11035 PF16360 GTP-binding GTPase Middle Region AF2641_RS11035 PF01926 50S ribosome-binding GTPase AF2641_RS11035 PF13167 GTP-binding GTPase N-terminal AF2641_RS11040 PF03458 UPF0126 domain AF2641_RS11045 PF02803 Thiolase, C-terminal domain AF2641_RS11045 PF00108 Thiolase, N-terminal domain AF2641_RS11050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF2641_RS11050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF2641_RS11055 PF00501 AMP-binding enzyme AF2641_RS11055 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS11065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AF2641_RS11065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AF2641_RS11065 PF02770 Acyl-CoA dehydrogenase, middle domain AF2641_RS11070 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS11070 PF00501 AMP-binding enzyme AF2641_RS11075 PF17866 AAA lid domain AF2641_RS11075 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS11080 PF17209 Hfq protein AF2641_RS11090 PF08676 MutL C terminal dimerisation domain AF2641_RS11090 PF01119 DNA mismatch repair protein, C-terminal domain AF2641_RS11095 PF05192 MutS domain III AF2641_RS11095 PF05190 MutS family domain IV AF2641_RS11095 PF05188 MutS domain II AF2641_RS11095 PF01624 MutS domain I AF2641_RS11095 PF00488 MutS domain V AF2641_RS11100 PF10628 Outer spore coat protein E (CotE) AF2641_RS11105 PF06133 Control of competence regulator ComK, YlbF/YmcA AF2641_RS11110 PF04055 Radical SAM superfamily AF2641_RS11110 PF01938 TRAM domain AF2641_RS11110 PF00919 Uncharacterized protein family UPF0004 AF2641_RS11115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AF2641_RS11120 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AF2641_RS11120 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AF2641_RS11120 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AF2641_RS11125 PF01244 Membrane dipeptidase (Peptidase family M19) AF2641_RS11130 PF04232 Stage V sporulation protein S (SpoVS) AF2641_RS11135 PF13277 YmdB-like protein AF2641_RS11140 PF01966 HD domain AF2641_RS11140 PF12072 Domain of unknown function (DUF3552) AF2641_RS11140 PF00013 KH domain AF2641_RS11145 PF00154 recA bacterial DNA recombination protein AF2641_RS11150 PF00994 Probable molybdopterin binding domain AF2641_RS11150 PF18146 Damage-inducible protein CinA KH domain AF2641_RS11150 PF02464 Competence-damaged protein AF2641_RS11155 PF01066 CDP-alcohol phosphatidyltransferase AF2641_RS11160 PF13464 Domain of unknown function (DUF4115) AF2641_RS11165 PF11868 Protein of unknown function (DUF3388) AF2641_RS11170 PF11588 Protein of unknown function (DUF3243) AF2641_RS11180 PF00675 Insulinase (Peptidase family M16) AF2641_RS11180 PF05193 Peptidase M16 inactive domain AF2641_RS11185 PF05193 Peptidase M16 inactive domain AF2641_RS11190 PF00291 Pyridoxal-phosphate dependent enzyme AF2641_RS11195 PF00581 Rhodanese-like domain AF2641_RS11200 PF01396 Topoisomerase DNA binding C4 zinc finger AF2641_RS11200 PF13342 C-terminal repeat of topoisomerase AF2641_RS11200 PF01751 Toprim domain AF2641_RS11200 PF01131 DNA topoisomerase AF2641_RS11205 PF02096 60Kd inner membrane protein AF2641_RS11215 PF00781 Diacylglycerol kinase catalytic domain AF2641_RS11220 PF10057 Uncharacterized conserved protein (DUF2294) AF2641_RS11235 PF01266 FAD dependent oxidoreductase AF2641_RS11245 PF13685 Iron-containing alcohol dehydrogenase AF2641_RS11260 PF01979 Amidohydrolase family AF2641_RS11265 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AF2641_RS11275 PF00989 PAS fold AF2641_RS11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS11275 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS11290 PF01022 Bacterial regulatory protein, arsR family AF2641_RS11300 PF08125 Mannitol dehydrogenase C-terminal domain AF2641_RS11300 PF01232 Mannitol dehydrogenase Rossmann domain AF2641_RS11305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AF2641_RS11310 PF08279 HTH domain AF2641_RS11310 PF05043 Mga helix-turn-helix domain AF2641_RS11310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AF2641_RS11310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AF2641_RS11310 PF00874 PRD domain AF2641_RS11315 PF02378 Phosphotransferase system, EIIC AF2641_RS11315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AF2641_RS11320 PF00188 Cysteine-rich secretory protein family AF2641_RS11330 PF09339 IclR helix-turn-helix domain AF2641_RS11330 PF01614 Bacterial transcriptional regulator AF2641_RS11335 PF01274 Malate synthase AF2641_RS11340 PF00440 Bacterial regulatory proteins, tetR family AF2641_RS11340 PF13977 BetI-type transcriptional repressor, C-terminal AF2641_RS11350 PF00005 ABC transporter AF2641_RS11350 PF13732 Domain of unknown function (DUF4162) AF2641_RS11365 PF07486 Cell Wall Hydrolase AF2641_RS11370 PF04405 Domain of Unknown function (DUF542) AF2641_RS11370 PF01814 Hemerythrin HHE cation binding domain AF2641_RS11375 PF01047 MarR family AF2641_RS11380 PF07681 DoxX AF2641_RS11385 PF02678 Pirin AF2641_RS11385 PF17954 Quercetinase C-terminal cupin domain AF2641_RS11390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AF2641_RS11390 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS11395 PF07690 Major Facilitator Superfamily AF2641_RS11400 PF01268 Formate--tetrahydrofolate ligase AF2641_RS11405 PF00248 Aldo/keto reductase family AF2641_RS11410 PF10086 YhfC intramembrane metalloprotease AF2641_RS11415 PF07853 Protein of unknown function (DUF1648) AF2641_RS11415 PF13630 SdpI/YhfL protein family AF2641_RS11420 PF01022 Bacterial regulatory protein, arsR family AF2641_RS11425 PF01906 Putative heavy-metal-binding AF2641_RS11430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AF2641_RS11430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AF2641_RS11435 PF00175 Oxidoreductase NAD-binding domain AF2641_RS11435 PF00667 FAD binding domain AF2641_RS11435 PF00258 Flavodoxin AF2641_RS11440 PF03466 LysR substrate binding domain AF2641_RS11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AF2641_RS11450 PF02146 Sir2 family AF2641_RS11460 PF00171 Aldehyde dehydrogenase family AF2641_RS11470 PF00753 Metallo-beta-lactamase superfamily AF2641_RS11470 PF16123 Hydroxyacylglutathione hydrolase C-terminus AF2641_RS11485 PF13614 AAA domain AF2641_RS11495 PF00578 AhpC/TSA family AF2641_RS11500 PF04134 Protein of unknown function, DUF393 AF2641_RS11515 PF13769 Virulence factor AF2641_RS11515 PF08712 Scaffold protein Nfu/NifU N terminal AF2641_RS11545 PF00005 ABC transporter AF2641_RS11575 PF06039 Malate:quinone oxidoreductase (Mqo) AF2641_RS11600 PF01740 STAS domain AF2641_RS11600 PF00916 Sulfate permease family AF2641_RS11610 PF00582 Universal stress protein family AF2641_RS11615 PF09587 Bacterial capsule synthesis protein PGA_cap AF2641_RS11620 PF02447 GntP family permease AF2641_RS11625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS11625 PF00672 HAMP domain AF2641_RS11625 PF12729 Four helix bundle sensory module for signal transduction AF2641_RS11630 PF00474 Sodium:solute symporter family AF2641_RS11635 PF01619 Proline dehydrogenase AF2641_RS11640 PF00171 Aldehyde dehydrogenase family AF2641_RS11645 PF13556 PucR C-terminal helix-turn-helix domain AF2641_RS11645 PF17853 GGDEF-like domain AF2641_RS11650 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS11655 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS11660 PF00005 ABC transporter AF2641_RS11665 PF02608 ABC transporter substrate-binding protein PnrA-like AF2641_RS11670 PF07702 UTRA domain AF2641_RS11670 PF00392 Bacterial regulatory proteins, gntR family AF2641_RS11675 PF01580 FtsK/SpoIIIE family AF2641_RS11675 PF17854 FtsK alpha domain AF2641_RS11675 PF09397 Ftsk gamma domain AF2641_RS11685 PF00574 Clp protease AF2641_RS11690 PF00753 Metallo-beta-lactamase superfamily AF2641_RS11690 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AF2641_RS11690 PF17770 Ribonuclease J C-terminal domain AF2641_RS11695 PF00701 Dihydrodipicolinate synthetase family AF2641_RS11700 PF13840 ACT domain AF2641_RS11700 PF00696 Amino acid kinase family AF2641_RS11705 PF02774 Semialdehyde dehydrogenase, dimerisation domain AF2641_RS11705 PF01118 Semialdehyde dehydrogenase, NAD binding domain AF2641_RS11710 PF02441 Flavoprotein AF2641_RS11715 PF16924 Dipicolinate synthase subunit A N-terminal domain AF2641_RS11715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AF2641_RS11720 PF05239 PRC-barrel domain AF2641_RS11725 PF00675 Insulinase (Peptidase family M16) AF2641_RS11725 PF05193 Peptidase M16 inactive domain AF2641_RS11730 PF01522 Polysaccharide deacetylase AF2641_RS11735 PF01138 3' exoribonuclease family, domain 1 AF2641_RS11735 PF00013 KH domain AF2641_RS11735 PF00575 S1 RNA binding domain AF2641_RS11735 PF03725 3' exoribonuclease family, domain 2 AF2641_RS11735 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AF2641_RS11740 PF00312 Ribosomal protein S15 AF2641_RS11745 PF06574 FAD synthetase AF2641_RS11745 PF01687 Riboflavin kinase AF2641_RS11750 PF01509 TruB family pseudouridylate synthase (N terminal domain) AF2641_RS11750 PF16198 tRNA pseudouridylate synthase B C-terminal domain AF2641_RS11755 PF02033 Ribosome-binding factor A AF2641_RS11760 PF04456 Protein of unknown function (DUF503) AF2641_RS11765 PF04760 Translation initiation factor IF-2, N-terminal region AF2641_RS11765 PF00009 Elongation factor Tu GTP binding domain AF2641_RS11765 PF11987 Translation-initiation factor 2 AF2641_RS11770 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AF2641_RS11775 PF04296 Protein of unknown function (DUF448) AF2641_RS11780 PF00575 S1 RNA binding domain AF2641_RS11780 PF08529 NusA N-terminal domain AF2641_RS11780 PF13184 NusA-like KH domain AF2641_RS11785 PF17384 RimP C-terminal SH3 domain AF2641_RS11785 PF02576 RimP N-terminal domain AF2641_RS11795 PF03129 Anticodon binding domain AF2641_RS11795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AF2641_RS11795 PF04073 Aminoacyl-tRNA editing domain AF2641_RS11800 PF13180 PDZ domain AF2641_RS11800 PF02163 Peptidase family M50 AF2641_RS11805 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AF2641_RS11805 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AF2641_RS11805 PF13288 DXP reductoisomerase C-terminal domain AF2641_RS11815 PF01255 Putative undecaprenyl diphosphate synthase AF2641_RS11820 PF01765 Ribosome recycling factor AF2641_RS11825 PF00696 Amino acid kinase family AF2641_RS11830 PF00889 Elongation factor TS AF2641_RS11835 PF00318 Ribosomal protein S2 AF2641_RS11850 PF04539 Sigma-70 region 3 AF2641_RS11850 PF04545 Sigma-70, region 4 AF2641_RS11850 PF04542 Sigma-70 region 2 AF2641_RS11860 PF03975 CheD chemotactic sensory transduction AF2641_RS11865 PF04509 CheC-like family AF2641_RS11870 PF01584 CheW-like domain AF2641_RS11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS11875 PF02895 Signal transducing histidine kinase, homodimeric domain AF2641_RS11875 PF01627 Hpt domain AF2641_RS11875 PF07194 P2 response regulator binding domain AF2641_RS11875 PF01584 CheW-like domain AF2641_RS11880 PF01339 CheB methylesterase AF2641_RS11880 PF00072 Response regulator receiver domain AF2641_RS11885 PF10609 NUBPL iron-transfer P-loop NTPase AF2641_RS11890 PF00448 SRP54-type protein, GTPase domain AF2641_RS11895 PF00771 FHIPEP family AF2641_RS11900 PF01312 FlhB HrpN YscU SpaS Family AF2641_RS11905 PF01311 Bacterial export proteins, family 1 AF2641_RS11910 PF01313 Bacterial export proteins, family 3 AF2641_RS11915 PF00813 FliP family AF2641_RS11920 PF04347 Flagellar biosynthesis protein, FliO AF2641_RS11925 PF00072 Response regulator receiver domain AF2641_RS11930 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AF2641_RS11930 PF04509 CheC-like family AF2641_RS11935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AF2641_RS11935 PF02154 Flagellar motor switch protein FliM AF2641_RS11940 PF03748 Flagellar basal body-associated protein FliL AF2641_RS11945 PF06289 Flagellar and Swarming motility proteins AF2641_RS11950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AF2641_RS11950 PF00460 Flagella basal body rod protein AF2641_RS11960 PF03963 Flagellar hook capping protein - N-terminal region AF2641_RS11965 PF02120 Flagellar hook-length control protein FliK AF2641_RS11975 PF02050 Flagellar FliJ protein AF2641_RS11980 PF18269 T3SS EscN ATPase C-terminal domain AF2641_RS11980 PF02874 ATP synthase alpha/beta family, beta-barrel domain AF2641_RS11980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AF2641_RS11985 PF02108 Flagellar assembly protein FliH AF2641_RS11990 PF14842 FliG N-terminal domain AF2641_RS11990 PF01706 FliG C-terminal domain AF2641_RS11990 PF14841 FliG middle domain AF2641_RS11995 PF01514 Secretory protein of YscJ/FliF family AF2641_RS11995 PF08345 Flagellar M-ring protein C-terminal AF2641_RS12000 PF02049 Flagellar hook-basal body complex protein FliE AF2641_RS12005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AF2641_RS12005 PF00460 Flagella basal body rod protein AF2641_RS12010 PF00460 Flagella basal body rod protein AF2641_RS12015 PF06018 CodY GAF-like domain AF2641_RS12015 PF08222 CodY helix-turn-helix domain AF2641_RS12020 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS12020 PF10431 C-terminal, D2-small domain, of ClpB protein AF2641_RS12020 PF07724 AAA domain (Cdc48 subfamily) AF2641_RS12025 PF00227 Proteasome subunit AF2641_RS12030 PF02899 Phage integrase, N-terminal SAM-like domain AF2641_RS12030 PF00589 Phage integrase family AF2641_RS12035 PF01134 Glucose inhibited division protein A AF2641_RS12040 PF01131 DNA topoisomerase AF2641_RS12040 PF01751 Toprim domain AF2641_RS12040 PF01396 Topoisomerase DNA binding C4 zinc finger AF2641_RS12045 PF02481 DNA recombination-mediator protein A AF2641_RS12050 PF02629 CoA binding domain AF2641_RS12050 PF00549 CoA-ligase AF2641_RS12055 PF08442 ATP-grasp domain AF2641_RS12055 PF00549 CoA-ligase AF2641_RS12060 PF01312 FlhB HrpN YscU SpaS Family AF2641_RS12070 PF01351 Ribonuclease HII AF2641_RS12075 PF01926 50S ribosome-binding GTPase AF2641_RS12080 PF10502 Signal peptidase, peptidase S26 AF2641_RS12085 PF01245 Ribosomal protein L19 AF2641_RS12090 PF01746 tRNA (Guanine-1)-methyltransferase AF2641_RS12095 PF05239 PRC-barrel domain AF2641_RS12095 PF01782 RimM N-terminal domain AF2641_RS12100 PF11068 YlqD protein AF2641_RS12110 PF00886 Ribosomal protein S16 AF2641_RS12115 PF02978 Signal peptide binding domain AF2641_RS12115 PF02881 SRP54-type protein, helical bundle domain AF2641_RS12115 PF00448 SRP54-type protein, GTPase domain AF2641_RS12120 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AF2641_RS12125 PF00448 SRP54-type protein, GTPase domain AF2641_RS12125 PF02881 SRP54-type protein, helical bundle domain AF2641_RS12130 PF06470 SMC proteins Flexible Hinge Domain AF2641_RS12130 PF02463 RecF/RecN/SMC N terminal domain AF2641_RS12135 PF14622 Ribonuclease-III-like AF2641_RS12135 PF00035 Double-stranded RNA binding motif AF2641_RS12140 PF00550 Phosphopantetheine attachment site AF2641_RS12150 PF00698 Acyl transferase domain AF2641_RS12155 PF02504 Fatty acid synthesis protein AF2641_RS12160 PF08279 HTH domain AF2641_RS12160 PF01575 MaoC like domain AF2641_RS12165 PF17191 RecG wedge domain AF2641_RS12165 PF00271 Helicase conserved C-terminal domain AF2641_RS12165 PF00270 DEAD/DEAH box helicase AF2641_RS12170 PF03313 Serine dehydratase alpha chain AF2641_RS12175 PF01842 ACT domain AF2641_RS12175 PF03315 Serine dehydratase beta chain AF2641_RS12180 PF02734 DAK2 domain AF2641_RS12180 PF13684 Dihydroxyacetone kinase family AF2641_RS12185 PF03780 Asp23 family, cell envelope-related function AF2641_RS12190 PF00830 Ribosomal L28 family AF2641_RS12195 PF08183 Stage V sporulation protein family AF2641_RS12200 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AF2641_RS12200 PF04263 Thiamin pyrophosphokinase, catalytic domain AF2641_RS12205 PF00834 Ribulose-phosphate 3 epimerase family AF2641_RS12210 PF03193 RsgA GTPase AF2641_RS12210 PF16745 RsgA N-terminal domain AF2641_RS12215 PF00069 Protein kinase domain AF2641_RS12215 PF03793 PASTA domain AF2641_RS12225 PF04055 Radical SAM superfamily AF2641_RS12230 PF01189 16S rRNA methyltransferase RsmB/F AF2641_RS12230 PF01029 NusB family AF2641_RS12235 PF02911 Formyl transferase, C-terminal domain AF2641_RS12235 PF00551 Formyl transferase AF2641_RS12240 PF01327 Polypeptide deformylase AF2641_RS12245 PF18074 Primosomal protein N C-terminal domain AF2641_RS12245 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AF2641_RS12245 PF17764 3′ DNA-binding domain (3′BD) AF2641_RS12245 PF04851 Type III restriction enzyme, res subunit AF2641_RS12245 PF00271 Helicase conserved C-terminal domain AF2641_RS12250 PF02441 Flavoprotein AF2641_RS12250 PF04127 DNA / pantothenate metabolism flavoprotein AF2641_RS12255 PF01192 RNA polymerase Rpb6 AF2641_RS12260 PF00625 Guanylate kinase AF2641_RS12265 PF03755 YicC-like family, N-terminal region AF2641_RS12265 PF08340 Domain of unknown function (DUF1732) AF2641_RS12270 PF00690 Cation transporter/ATPase, N-terminus AF2641_RS12270 PF00689 Cation transporting ATPase, C-terminus AF2641_RS12275 PF05670 NFACT protein RNA binding domain AF2641_RS12305 PF00350 Dynamin family AF2641_RS12325 PF00156 Phosphoribosyl transferase domain AF2641_RS12330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AF2641_RS12335 PF01180 Dihydroorotate dehydrogenase AF2641_RS12340 PF00175 Oxidoreductase NAD-binding domain AF2641_RS12340 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AF2641_RS12345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AF2641_RS12345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF2641_RS12345 PF02142 MGS-like domain AF2641_RS12350 PF00117 Glutamine amidotransferase class-I AF2641_RS12350 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AF2641_RS12355 PF01979 Amidohydrolase family AF2641_RS12360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AF2641_RS12360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AF2641_RS12365 PF00860 Permease family AF2641_RS12370 PF00156 Phosphoribosyl transferase domain AF2641_RS12375 PF00849 RNA pseudouridylate synthase AF2641_RS12375 PF01479 S4 domain AF2641_RS12380 PF01252 Signal peptidase (SPase) II AF2641_RS12390 PF06827 Zinc finger found in FPG and IleRS AF2641_RS12390 PF00133 tRNA synthetases class I (I, L, M and V) AF2641_RS12390 PF08264 Anticodon-binding domain of tRNA AF2641_RS12395 PF05103 DivIVA protein AF2641_RS12400 PF01479 S4 domain AF2641_RS12400 PF17774 Putative RNA-binding domain in YlmH AF2641_RS12405 PF02325 YGGT family AF2641_RS12410 PF04472 Cell division protein SepF AF2641_RS12415 PF01168 Alanine racemase, N-terminal domain AF2641_RS12420 PF02578 Multi-copper polyphenol oxidoreductase laccase AF2641_RS12425 PF05239 PRC-barrel domain AF2641_RS12430 PF04542 Sigma-70 region 2 AF2641_RS12430 PF04539 Sigma-70 region 3 AF2641_RS12430 PF04545 Sigma-70, region 4 AF2641_RS12435 PF04545 Sigma-70, region 4 AF2641_RS12435 PF04542 Sigma-70 region 2 AF2641_RS12440 PF03419 Sporulation factor SpoIIGA AF2641_RS12445 PF12327 FtsZ family, C-terminal domain AF2641_RS12445 PF00091 Tubulin/FtsZ family, GTPase domain AF2641_RS12450 PF02491 SHS2 domain inserted in FTSA AF2641_RS12455 PF06947 Protein of unknown function (DUF1290) AF2641_RS12460 PF05949 Bacterial protein of unknown function (DUF881) AF2641_RS12465 PF05949 Bacterial protein of unknown function (DUF881) AF2641_RS12470 PF08478 POTRA domain, FtsQ-type AF2641_RS12475 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AF2641_RS12475 PF01565 FAD binding domain AF2641_RS12480 PF03033 Glycosyltransferase family 28 N-terminal domain AF2641_RS12480 PF04101 Glycosyltransferase family 28 C-terminal domain AF2641_RS12485 PF01098 Cell cycle protein AF2641_RS12490 PF02875 Mur ligase family, glutamate ligase domain AF2641_RS12490 PF08245 Mur ligase middle domain AF2641_RS12495 PF00953 Glycosyl transferase family 4 AF2641_RS12495 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AF2641_RS12500 PF08245 Mur ligase middle domain AF2641_RS12500 PF01225 Mur ligase family, catalytic domain AF2641_RS12500 PF02875 Mur ligase family, glutamate ligase domain AF2641_RS12505 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS12505 PF03717 Penicillin-binding Protein dimerisation domain AF2641_RS12505 PF03793 PASTA domain AF2641_RS12510 PF03793 PASTA domain AF2641_RS12510 PF03717 Penicillin-binding Protein dimerisation domain AF2641_RS12510 PF00905 Penicillin binding protein transpeptidase domain AF2641_RS12515 PF04977 Septum formation initiator AF2641_RS12520 PF01795 MraW methylase family AF2641_RS12525 PF10079 Bacillithiol biosynthesis BshC AF2641_RS12535 PF08546 Ketopantoate reductase PanE/ApbA C terminal AF2641_RS12535 PF02558 Ketopantoate reductase PanE/ApbA AF2641_RS12545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AF2641_RS12545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AF2641_RS12545 PF00378 Enoyl-CoA hydratase/isomerase AF2641_RS12550 PF01783 Ribosomal L32p protein family AF2641_RS12555 PF02620 Large ribosomal RNA subunit accumulation protein YceD AF2641_RS12560 PF05636 HIGH Nucleotidyl Transferase AF2641_RS12565 PF13180 PDZ domain AF2641_RS12565 PF05362 Lon protease (S16) C-terminal proteolytic domain AF2641_RS12570 PF01734 Patatin-like phospholipase AF2641_RS12575 PF07670 Nucleoside recognition AF2641_RS12580 PF01467 Cytidylyltransferase-like AF2641_RS12600 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AF2641_RS12605 PF06133 Control of competence regulator ComK, YlbF/YmcA AF2641_RS12615 PF14003 YlbE-like protein AF2641_RS12620 PF14071 Putative coat protein AF2641_RS12625 PF14504 CAP-associated N-terminal AF2641_RS12625 PF00188 Cysteine-rich secretory protein family AF2641_RS12630 PF00571 CBS domain AF2641_RS12635 PF08868 YugN-like family AF2641_RS12645 PF01594 AI-2E family transporter AF2641_RS12655 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AF2641_RS12660 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AF2641_RS12665 PF00510 Cytochrome c oxidase subunit III AF2641_RS12670 PF00115 Cytochrome C and Quinol oxidase polypeptide I AF2641_RS12675 PF00034 Cytochrome c AF2641_RS12675 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AF2641_RS12675 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AF2641_RS12680 PF01040 UbiA prenyltransferase family AF2641_RS12685 PF02628 Cytochrome oxidase assembly protein AF2641_RS12690 PF00364 Biotin-requiring enzyme AF2641_RS12690 PF00289 Biotin carboxylase, N-terminal domain AF2641_RS12690 PF02785 Biotin carboxylase C-terminal domain AF2641_RS12690 PF02436 Conserved carboxylase domain AF2641_RS12690 PF00682 HMGL-like AF2641_RS12690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF2641_RS12695 PF01098 Cell cycle protein AF2641_RS12700 PF07408 Protein of unknown function (DUF1507) AF2641_RS12710 PF13638 PIN domain AF2641_RS12710 PF02562 PhoH-like protein AF2641_RS12715 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AF2641_RS12735 PF14036 YlaH-like protein AF2641_RS12740 PF00679 Elongation factor G C-terminus AF2641_RS12740 PF03144 Elongation factor Tu domain 2 AF2641_RS12740 PF14492 Elongation Factor G, domain II AF2641_RS12740 PF00009 Elongation factor Tu GTP binding domain AF2641_RS12750 PF00459 Inositol monophosphatase family AF2641_RS12760 PF05256 Uncharacterised protein family (UPF0223) AF2641_RS12765 PF03060 Nitronate monooxygenase AF2641_RS12770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AF2641_RS12770 PF01276 Orn/Lys/Arg decarboxylase, major domain AF2641_RS12795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AF2641_RS12795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AF2641_RS12800 PF00364 Biotin-requiring enzyme AF2641_RS12800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AF2641_RS12800 PF02817 e3 binding domain AF2641_RS12805 PF02779 Transketolase, pyrimidine binding domain AF2641_RS12805 PF02780 Transketolase, C-terminal domain AF2641_RS12810 PF00676 Dehydrogenase E1 component AF2641_RS12815 PF01327 Polypeptide deformylase AF2641_RS12825 PF07288 Protein of unknown function (DUF1447) AF2641_RS12830 PF00753 Metallo-beta-lactamase superfamily AF2641_RS12830 PF17770 Ribonuclease J C-terminal domain AF2641_RS12830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AF2641_RS12840 PF02254 TrkA-N domain AF2641_RS12840 PF02080 TrkA-C domain AF2641_RS12845 PF00578 AhpC/TSA family AF2641_RS12850 PF07687 Peptidase dimerisation domain AF2641_RS12850 PF01546 Peptidase family M20/M25/M40 AF2641_RS12855 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AF2641_RS12855 PF14602 Hexapeptide repeat of succinyl-transferase AF2641_RS12855 PF00132 Bacterial transferase hexapeptide (six repeats) AF2641_RS12865 PF08796 Protein of unknown function (DUF1797) AF2641_RS12875 PF00563 EAL domain AF2641_RS12875 PF10388 EAL-domain associated signalling protein domain AF2641_RS12885 PF10518 TAT (twin-arginine translocation) pathway signal sequence AF2641_RS12885 PF00149 Calcineurin-like phosphoesterase AF2641_RS12890 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AF2641_RS12895 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AF2641_RS12900 PF02503 Polyphosphate kinase middle domain AF2641_RS12900 PF13089 Polyphosphate kinase N-terminal domain AF2641_RS12900 PF17941 Polyphosphate kinase C-terminal domain 1 AF2641_RS12900 PF13090 Polyphosphate kinase C-terminal domain 2 AF2641_RS12905 PF02541 Ppx/GppA phosphatase family AF2641_RS12910 PF14177 YkyB-like protein AF2641_RS12915 PF00563 EAL domain AF2641_RS12915 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS12915 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS12920 PF05504 Spore germination B3/ GerAC like, C-terminal AF2641_RS12925 PF03845 Spore germination protein AF2641_RS12930 PF03323 Bacillus/Clostridium GerA spore germination protein AF2641_RS12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS12935 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS12935 PF16736 Single Cache-like AF2641_RS12935 PF00989 PAS fold AF2641_RS12940 PF00072 Response regulator receiver domain AF2641_RS12940 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS12950 PF00535 Glycosyl transferase family 2 AF2641_RS12960 PF00072 Response regulator receiver domain AF2641_RS12960 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS12965 PF00072 Response regulator receiver domain AF2641_RS12965 PF01584 CheW-like domain AF2641_RS12980 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS12990 PF08858 IDEAL domain AF2641_RS12990 PF08864 UPF0302 domain AF2641_RS12995 PF00155 Aminotransferase class I and II AF2641_RS13000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AF2641_RS13000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AF2641_RS13010 PF00106 short chain dehydrogenase AF2641_RS13015 PF00072 Response regulator receiver domain AF2641_RS13015 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13025 PF02743 Cache domain AF2641_RS13025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS13025 PF00672 HAMP domain AF2641_RS13030 PF02896 PEP-utilising enzyme, TIM barrel domain AF2641_RS13030 PF00391 PEP-utilising enzyme, mobile domain AF2641_RS13030 PF05524 PEP-utilising enzyme, N-terminal AF2641_RS13035 PF00381 PTS HPr component phosphorylation site AF2641_RS13040 PF00367 phosphotransferase system, EIIB AF2641_RS13040 PF02378 Phosphotransferase system, EIIC AF2641_RS13040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AF2641_RS13045 PF00874 PRD domain AF2641_RS13045 PF03123 CAT RNA binding domain AF2641_RS13055 PF01476 LysM domain AF2641_RS13055 PF05257 CHAP domain AF2641_RS13065 PF00561 alpha/beta hydrolase fold AF2641_RS13070 PF03334 Na+/H+ antiporter subunit AF2641_RS13075 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AF2641_RS13080 PF01899 Na+/H+ ion antiporter subunit AF2641_RS13085 PF00361 Proton-conducting membrane transporter AF2641_RS13090 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AF2641_RS13095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AF2641_RS13100 PF00361 Proton-conducting membrane transporter AF2641_RS13100 PF13244 Domain of unknown function (DUF4040) AF2641_RS13100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AF2641_RS13105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS13125 PF01638 HxlR-like helix-turn-helix AF2641_RS13130 PF00881 Nitroreductase family AF2641_RS13135 PF00989 PAS fold AF2641_RS13135 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13140 PF14166 YueH-like protein AF2641_RS13160 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AF2641_RS13165 PF13460 NAD(P)H-binding AF2641_RS13180 PF14489 QueF-like protein AF2641_RS13185 PF04055 Radical SAM superfamily AF2641_RS13190 PF01242 6-pyruvoyl tetrahydropterin synthase AF2641_RS13195 PF06508 Queuosine biosynthesis protein QueC AF2641_RS13200 PF01895 PhoU domain AF2641_RS13210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS13210 PF00672 HAMP domain AF2641_RS13225 PF13115 YtkA-like AF2641_RS13235 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS13235 PF00072 Response regulator receiver domain AF2641_RS13240 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS13240 PF18698 Histidine kinase sensor domain AF2641_RS13240 PF00672 HAMP domain AF2641_RS13240 PF00989 PAS fold AF2641_RS13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13245 PF08447 PAS fold AF2641_RS13245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS13245 PF13426 PAS domain AF2641_RS13250 PF10431 C-terminal, D2-small domain, of ClpB protein AF2641_RS13250 PF17871 AAA lid domain AF2641_RS13250 PF07724 AAA domain (Cdc48 subfamily) AF2641_RS13250 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS13255 PF00440 Bacterial regulatory proteins, tetR family AF2641_RS13265 PF00005 ABC transporter AF2641_RS13270 PF13520 Amino acid permease AF2641_RS13285 PF02743 Cache domain AF2641_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13285 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS13290 PF02535 ZIP Zinc transporter AF2641_RS13295 PF03079 ARD/ARD' family AF2641_RS13300 PF00596 Class II Aldolase and Adducin N-terminal domain AF2641_RS13310 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AF2641_RS13310 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AF2641_RS13315 PF00155 Aminotransferase class I and II AF2641_RS13320 PF00795 Carbon-nitrogen hydrolase AF2641_RS13325 PF01636 Phosphotransferase enzyme family AF2641_RS13330 PF01008 Initiation factor 2 subunit family AF2641_RS13335 PF13407 Periplasmic binding protein domain AF2641_RS13340 PF00005 ABC transporter AF2641_RS13345 PF02653 Branched-chain amino acid transport system / permease component AF2641_RS13350 PF00672 HAMP domain AF2641_RS13350 PF12729 Four helix bundle sensory module for signal transduction AF2641_RS13350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS13355 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS13355 PF00989 PAS fold AF2641_RS13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13355 PF13188 PAS domain AF2641_RS13355 PF13426 PAS domain AF2641_RS13360 PF02589 LUD domain AF2641_RS13365 PF02589 LUD domain AF2641_RS13365 PF11870 Domain of unknown function (DUF3390) AF2641_RS13365 PF13183 4Fe-4S dicluster domain AF2641_RS13370 PF02754 Cysteine-rich domain AF2641_RS13375 PF07729 FCD domain AF2641_RS13375 PF00392 Bacterial regulatory proteins, gntR family AF2641_RS13380 PF02652 L-lactate permease AF2641_RS13390 PF07282 Putative transposase DNA-binding domain AF2641_RS13390 PF01385 Probable transposase AF2641_RS13390 PF12323 Helix-turn-helix domain AF2641_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS13440 PF13419 Haloacid dehalogenase-like hydrolase AF2641_RS13445 PF03636 Glycosyl hydrolase family 65, N-terminal domain AF2641_RS13445 PF03632 Glycosyl hydrolase family 65 central catalytic domain AF2641_RS13445 PF03633 Glycosyl hydrolase family 65, C-terminal domain AF2641_RS13450 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS13460 PF00672 HAMP domain AF2641_RS13460 PF02743 Cache domain AF2641_RS13460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS13465 PF13556 PucR C-terminal helix-turn-helix domain AF2641_RS13465 PF17853 GGDEF-like domain AF2641_RS13465 PF05651 Putative sugar diacid recognition AF2641_RS13470 PF02913 FAD linked oxidases, C-terminal domain AF2641_RS13470 PF01565 FAD binding domain AF2641_RS13475 PF02754 Cysteine-rich domain AF2641_RS13475 PF13183 4Fe-4S dicluster domain AF2641_RS13485 PF00210 Ferritin-like domain AF2641_RS13490 PF03741 Integral membrane protein TerC family AF2641_RS13495 PF13520 Amino acid permease AF2641_RS13500 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS13500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13505 PF07690 Major Facilitator Superfamily AF2641_RS13510 PF00535 Glycosyl transferase family 2 AF2641_RS13520 PF00398 Ribosomal RNA adenine dimethylase AF2641_RS13525 PF02525 Flavodoxin-like fold AF2641_RS13540 PF02447 GntP family permease AF2641_RS13545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AF2641_RS13545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AF2641_RS13550 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS13555 PF01168 Alanine racemase, N-terminal domain AF2641_RS13565 PF00390 Malic enzyme, N-terminal domain AF2641_RS13565 PF03949 Malic enzyme, NAD binding domain AF2641_RS13570 PF10415 Fumarase C C-terminus AF2641_RS13570 PF00206 Lyase AF2641_RS13575 PF00710 Asparaginase, N-terminal AF2641_RS13575 PF17763 Glutaminase/Asparaginase C-terminal domain AF2641_RS13580 PF01381 Helix-turn-helix AF2641_RS13585 PF00069 Protein kinase domain AF2641_RS13600 PF00892 EamA-like transporter family AF2641_RS13605 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AF2641_RS13610 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AF2641_RS13615 PF05726 Pirin C-terminal cupin domain AF2641_RS13615 PF02678 Pirin AF2641_RS13620 PF00293 NUDIX domain AF2641_RS13625 PF00664 ABC transporter transmembrane region AF2641_RS13625 PF00005 ABC transporter AF2641_RS13630 PF00005 ABC transporter AF2641_RS13630 PF00664 ABC transporter transmembrane region AF2641_RS13635 PF13276 HTH-like domain AF2641_RS13635 PF13333 Integrase core domain AF2641_RS13635 PF00665 Integrase core domain AF2641_RS13645 PF01256 Carbohydrate kinase AF2641_RS13645 PF03853 YjeF-related protein N-terminus AF2641_RS13650 PF00403 Heavy-metal-associated domain AF2641_RS13655 PF01022 Bacterial regulatory protein, arsR family AF2641_RS13665 PF01790 Prolipoprotein diacylglyceryl transferase AF2641_RS13670 PF13537 Glutamine amidotransferase domain AF2641_RS13670 PF00733 Asparagine synthase AF2641_RS13675 PF13529 Peptidase_C39 like family AF2641_RS13680 PF10518 TAT (twin-arginine translocation) pathway signal sequence AF2641_RS13680 PF07732 Multicopper oxidase AF2641_RS13680 PF07731 Multicopper oxidase AF2641_RS13680 PF00394 Multicopper oxidase AF2641_RS13685 PF00403 Heavy-metal-associated domain AF2641_RS13690 PF00403 Heavy-metal-associated domain AF2641_RS13695 PF02583 Metal-sensitive transcriptional repressor AF2641_RS13700 PF02683 Cytochrome C biogenesis protein transmembrane region AF2641_RS13705 PF00578 AhpC/TSA family AF2641_RS13730 PF00072 Response regulator receiver domain AF2641_RS13730 PF00486 Transcriptional regulatory protein, C terminal AF2641_RS13735 PF00672 HAMP domain AF2641_RS13735 PF00512 His Kinase A (phospho-acceptor) domain AF2641_RS13735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AF2641_RS13790 PF01609 Transposase DDE domain AF2641_RS13835 PF01609 Transposase DDE domain AF2641_RS13845 PF01048 Phosphorylase superfamily AF2641_RS13870 PF13791 Sigma factor regulator C-terminal AF2641_RS13870 PF13800 Sigma factor regulator N-terminal AF2641_RS13875 PF08281 Sigma-70, region 4 AF2641_RS13875 PF04542 Sigma-70 region 2 AF2641_RS13895 PF00145 C-5 cytosine-specific DNA methylase AF2641_RS13925 PF14659 Phage integrase, N-terminal SAM-like domain AF2641_RS13925 PF00589 Phage integrase family AF2641_RS13940 PF01966 HD domain AF2641_RS13945 PF01053 Cys/Met metabolism PLP-dependent enzyme AF2641_RS13950 PF01053 Cys/Met metabolism PLP-dependent enzyme AF2641_RS13955 PF07883 Cupin domain AF2641_RS13960 PF01741 Large-conductance mechanosensitive channel, MscL AF2641_RS13965 PF04608 Phosphatidylglycerophosphatase A AF2641_RS13970 PF00756 Putative esterase AF2641_RS13980 PF13673 Acetyltransferase (GNAT) domain AF2641_RS13985 PF04239 Protein of unknown function (DUF421) AF2641_RS13990 PF00580 UvrD/REP helicase N-terminal domain AF2641_RS13990 PF13361 UvrD-like helicase C-terminal domain AF2641_RS13995 PF14069 Stage VI sporulation protein F AF2641_RS14000 PF09680 Family of unknown function AF2641_RS14010 PF00085 Thioredoxin AF2641_RS14015 PF04239 Protein of unknown function (DUF421) AF2641_RS14025 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AF2641_RS14030 PF07451 Stage V sporulation protein AD (SpoVAD) AF2641_RS14035 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AF2641_RS14045 PF01609 Transposase DDE domain AF2641_RS14075 PF07098 Protein of unknown function (DUF1360) AF2641_RS14085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AF2641_RS14085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AF2641_RS14085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AF2641_RS14090 PF01370 NAD dependent epimerase/dehydratase family AF2641_RS14095 PF13439 Glycosyltransferase Family 4 AF2641_RS14095 PF00534 Glycosyl transferases group 1 AF2641_RS14110 PF07690 Major Facilitator Superfamily AF2641_RS14120 PF01769 Divalent cation transporter AF2641_RS14120 PF03448 MgtE intracellular N domain AF2641_RS14120 PF00571 CBS domain AF2641_RS14125 PF01098 Cell cycle protein AF2641_RS14130 PF12671 Putative amidase domain AF2641_RS14140 PF00149 Calcineurin-like phosphoesterase AF2641_RS14145 PF00849 RNA pseudouridylate synthase AF2641_RS14150 PF01513 ATP-NAD kinase AF2641_RS14155 PF04607 Region found in RelA / SpoT proteins AF2641_RS14165 PF01928 CYTH domain AF2641_RS14170 PF01464 Transglycosylase SLT domain AF2641_RS14175 PF01152 Bacterial-like globin AF2641_RS14185 PF08439 Oligopeptidase F AF2641_RS14185 PF01432 Peptidase family M3 AF2641_RS14195 PF05389 Negative regulator of genetic competence (MecA) AF2641_RS14200 PF13396 Phospholipase_D-nuclease N-terminal AF2641_RS14200 PF13091 PLD-like domain AF2641_RS14205 PF03960 ArsC family AF2641_RS14215 PF00005 ABC transporter AF2641_RS14215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AF2641_RS14220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AF2641_RS14220 PF00005 ABC transporter AF2641_RS14225 PF12911 N-terminal TM domain of oligopeptide transport permease C AF2641_RS14225 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS14230 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS14235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AF2641_RS14250 PF00579 tRNA synthetases class I (W and Y) AF2641_RS14255 PF12227 Protein of unknown function (DUF3603) AF2641_RS14265 PF10026 Predicted Zn-dependent protease (DUF2268) AF2641_RS14270 PF02801 Beta-ketoacyl synthase, C-terminal domain AF2641_RS14270 PF00109 Beta-ketoacyl synthase, N-terminal domain AF2641_RS14275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AF2641_RS14275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AF2641_RS14280 PF02608 ABC transporter substrate-binding protein PnrA-like AF2641_RS14295 PF07724 AAA domain (Cdc48 subfamily) AF2641_RS14295 PF02861 Clp amino terminal domain, pathogenicity island component AF2641_RS14295 PF17871 AAA lid domain AF2641_RS14295 PF10431 C-terminal, D2-small domain, of ClpB protein AF2641_RS14295 PF00004 ATPase family associated with various cellular activities (AAA) AF2641_RS14300 PF14168 YjzC-like protein AF2641_RS14305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AF2641_RS14305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AF2641_RS14310 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AF2641_RS14310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AF2641_RS14315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AF2641_RS14315 PF00117 Glutamine amidotransferase class-I AF2641_RS14320 PF00202 Aminotransferase class-III AF2641_RS14325 PF00696 Amino acid kinase family AF2641_RS14330 PF01960 ArgJ family AF2641_RS14335 PF02774 Semialdehyde dehydrogenase, dimerisation domain AF2641_RS14335 PF01118 Semialdehyde dehydrogenase, NAD binding domain AF2641_RS14340 PF00325 Bacterial regulatory proteins, crp family AF2641_RS14340 PF00027 Cyclic nucleotide-binding domain AF2641_RS14350 PF00326 Prolyl oligopeptidase family AF2641_RS14365 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AF2641_RS14365 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AF2641_RS14370 PF02645 Uncharacterised protein, DegV family COG1307 AF2641_RS14380 PF00672 HAMP domain AF2641_RS14380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS14380 PF02743 Cache domain AF2641_RS14385 PF02608 ABC transporter substrate-binding protein PnrA-like AF2641_RS14390 PF04461 Protein of unknown function (DUF520) AF2641_RS14395 PF02219 Methylenetetrahydrofolate reductase AF2641_RS14395 PF02574 Homocysteine S-methyltransferase AF2641_RS14400 PF02965 Vitamin B12 dependent methionine synthase, activation domain AF2641_RS14400 PF02607 B12 binding domain AF2641_RS14400 PF02310 B12 binding domain AF2641_RS14400 PF00809 Pterin binding enzyme AF2641_RS14400 PF02574 Homocysteine S-methyltransferase AF2641_RS14405 PF00356 Bacterial regulatory proteins, lacI family AF2641_RS14410 PF01055 Glycosyl hydrolases family 31 AF2641_RS14410 PF13802 Galactose mutarotase-like AF2641_RS14410 PF17137 Domain of unknown function (DUF5110) AF2641_RS14410 PF16338 Domain of unknown function (DUF4968) AF2641_RS14415 PF00128 Alpha amylase, catalytic domain AF2641_RS14415 PF03423 Carbohydrate binding domain (family 25) AF2641_RS14415 PF01373 Glycosyl hydrolase family 14 AF2641_RS14420 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS14425 PF00528 Binding-protein-dependent transport system inner membrane component AF2641_RS14430 PF13416 Bacterial extracellular solute-binding protein AF2641_RS14435 PF16657 Maltogenic Amylase, C-terminal domain AF2641_RS14435 PF02903 Alpha amylase, N-terminal ig-like domain AF2641_RS14435 PF00128 Alpha amylase, catalytic domain AF2641_RS14440 PF12833 Helix-turn-helix domain AF2641_RS14440 PF02311 AraC-like ligand binding domain AF2641_RS14445 PF01554 MatE AF2641_RS14450 PF01593 Flavin containing amine oxidoreductase AF2641_RS14455 PF00535 Glycosyl transferase family 2 AF2641_RS14475 PF01593 Flavin containing amine oxidoreductase AF2641_RS14480 PF01593 Flavin containing amine oxidoreductase AF2641_RS14485 PF00733 Asparagine synthase AF2641_RS14485 PF13537 Glutamine amidotransferase domain AF2641_RS14495 PF00563 EAL domain AF2641_RS14495 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS14495 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS14500 PF07457 Protein of unknown function (DUF1516) AF2641_RS14505 PF00202 Aminotransferase class-III AF2641_RS14510 PF01557 Fumarylacetoacetate (FAA) hydrolase family AF2641_RS14515 PF09388 Spo0E like sporulation regulatory protein AF2641_RS14520 PF04235 Protein of unknown function (DUF418) AF2641_RS14525 PF13193 AMP-binding enzyme C-terminal domain AF2641_RS14525 PF00501 AMP-binding enzyme AF2641_RS14535 PF10676 Spore germination protein gerPA/gerPF AF2641_RS14540 PF10803 Spore germination GerPB AF2641_RS14545 PF10737 Spore germination protein GerPC AF2641_RS14560 PF10676 Spore germination protein gerPA/gerPF AF2641_RS14570 PF13476 AAA domain AF2641_RS14575 PF12320 Type 5 capsule protein repressor C-terminal domain AF2641_RS14575 PF00149 Calcineurin-like phosphoesterase AF2641_RS14580 PF12705 PD-(D/E)XK nuclease superfamily AF2641_RS14580 PF00580 UvrD/REP helicase N-terminal domain AF2641_RS14580 PF13361 UvrD-like helicase C-terminal domain AF2641_RS14585 PF13361 UvrD-like helicase C-terminal domain AF2641_RS14585 PF12705 PD-(D/E)XK nuclease superfamily AF2641_RS14590 PF09335 SNARE associated Golgi protein AF2641_RS14595 PF06338 ComK protein AF2641_RS14600 PF00463 Isocitrate lyase family AF2641_RS14605 PF16491 CAAX prenyl protease N-terminal, five membrane helices AF2641_RS14605 PF01435 Peptidase family M48 AF2641_RS14610 PF02630 SCO1/SenC AF2641_RS14615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS14615 PF00672 HAMP domain AF2641_RS14620 PF02743 Cache domain AF2641_RS14620 PF00672 HAMP domain AF2641_RS14620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AF2641_RS14625 PF00563 EAL domain AF2641_RS14625 PF00990 Diguanylate cyclase, GGDEF domain AF2641_RS14625 PF03707 Bacterial signalling protein N terminal repeat AF2641_RS14635 PF02653 Branched-chain amino acid transport system / permease component