AF2641_RS00240	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AF2641_RS00250	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AF2641_RS00250	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AF2641_RS00250	PWY-7766	AF2641_RS00250
AF2641_RS00405	PWY-6910	hydroxymethylpyrimidine salvage
AF2641_RS00405	PWY-7356	thiamin salvage IV (yeast)
AF2641_RS00405	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AF2641_RS00415	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS00415	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS00430	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AF2641_RS00430	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AF2641_RS00430	PWY-6897	thiamin salvage II
AF2641_RS00430	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AF2641_RS00430	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AF2641_RS00430	PWY-7356	thiamin salvage IV (yeast)
AF2641_RS00430	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AF2641_RS00450	PWY-6899	base-degraded thiamin salvage
AF2641_RS00450	PWY-7356	thiamin salvage IV (yeast)
AF2641_RS00510	PWY-6749	CMP-legionaminate biosynthesis I
AF2641_RS00575	PWY-5350	thiosulfate disproportionation III (rhodanese)
AF2641_RS00595	PWY-6004	glycine betaine biosynthesis V (from glycine)
AF2641_RS00605	PWY-6700	queuosine biosynthesis
AF2641_RS00640	PWY-3121	linamarin degradation
AF2641_RS00640	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AF2641_RS00640	PWY-6002	lotaustralin degradation
AF2641_RS00640	PWY-6788	cellulose degradation II (fungi)
AF2641_RS00640	PWY-7091	linustatin bioactivation
AF2641_RS00640	PWY-7092	neolinustatin bioactivation
AF2641_RS00775	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS00960	PWY-5392	reductive TCA cycle II
AF2641_RS00960	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AF2641_RS00960	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS00960	PWY-5913	TCA cycle VI (obligate autotrophs)
AF2641_RS00960	PWY-6728	methylaspartate cycle
AF2641_RS00960	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS00960	PWY-7254	TCA cycle VII (acetate-producers)
AF2641_RS00960	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AF2641_RS01030	PWY-5278	sulfite oxidation III
AF2641_RS01030	PWY-5340	sulfate activation for sulfonation
AF2641_RS01030	PWY-6683	sulfate reduction III (assimilatory)
AF2641_RS01030	PWY-6932	selenate reduction
AF2641_RS01035	PWY-5340	sulfate activation for sulfonation
AF2641_RS01040	PWY-5194	siroheme biosynthesis
AF2641_RS01040	PWY-5196	factor 430 biosynthesis
AF2641_RS01040	PWY-5441	S-methyl-L-methionine cycle
AF2641_RS01040	PWY-702	L-methionine biosynthesis II
AF2641_RS01040	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AF2641_RS01045	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AF2641_RS01050	PWY-5194	siroheme biosynthesis
AF2641_RS01050	PWY-5196	factor 430 biosynthesis
AF2641_RS01050	PWY-5441	S-methyl-L-methionine cycle
AF2641_RS01050	PWY-702	L-methionine biosynthesis II
AF2641_RS01050	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AF2641_RS01260	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS01260	PWY-4521	arsenite oxidation I (respiratory)
AF2641_RS01260	PWY-6692	Fe(II) oxidation
AF2641_RS01260	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS01355	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AF2641_RS01370	PWY-6610	adenine and adenosine salvage IV
AF2641_RS01405	PWY-6853	ethylene biosynthesis II (microbes)
AF2641_RS01440	PWY-6610	adenine and adenosine salvage IV
AF2641_RS01450	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AF2641_RS01450	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AF2641_RS01450	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AF2641_RS01455	PWY-6123	inosine-5'-phosphate biosynthesis I
AF2641_RS01455	PWY-6124	inosine-5'-phosphate biosynthesis II
AF2641_RS01455	PWY-7234	inosine-5'-phosphate biosynthesis III
AF2641_RS01460	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AF2641_RS01460	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AF2641_RS01465	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AF2641_RS01465	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AF2641_RS01465	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AF2641_RS01470	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AF2641_RS01470	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AF2641_RS01470	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AF2641_RS01470	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AF2641_RS01480	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AF2641_RS01480	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AF2641_RS01480	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AF2641_RS01485	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AF2641_RS01485	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AF2641_RS01485	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AF2641_RS01490	PWY-6123	inosine-5'-phosphate biosynthesis I
AF2641_RS01490	PWY-6124	inosine-5'-phosphate biosynthesis II
AF2641_RS01490	PWY-7234	inosine-5'-phosphate biosynthesis III
AF2641_RS01495	PWY-6123	inosine-5'-phosphate biosynthesis I
AF2641_RS01495	PWY-6124	inosine-5'-phosphate biosynthesis II
AF2641_RS01495	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS01495	PWY-7234	inosine-5'-phosphate biosynthesis III
AF2641_RS01505	PWY-6123	inosine-5'-phosphate biosynthesis I
AF2641_RS01505	PWY-7234	inosine-5'-phosphate biosynthesis III
AF2641_RS01535	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS01570	PWY-40	putrescine biosynthesis I
AF2641_RS01570	PWY-6305	putrescine biosynthesis IV
AF2641_RS01580	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS01635	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AF2641_RS01635	PWY-5368	dimorphecolate biosynthesis
AF2641_RS01635	PWY-5995	linoleate biosynthesis I (plants)
AF2641_RS01635	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AF2641_RS01635	PWY-6803	phosphatidylcholine acyl editing
AF2641_RS01635	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AF2641_RS01635	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AF2641_RS01635	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AF2641_RS01635	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AF2641_RS01635	PWY-7470	phosphatidylcholine biosynthesis VII
AF2641_RS01635	PWY-7618	ricinoleate biosynthesis
AF2641_RS01645	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AF2641_RS01645	PWY-5368	dimorphecolate biosynthesis
AF2641_RS01645	PWY-5995	linoleate biosynthesis I (plants)
AF2641_RS01645	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AF2641_RS01645	PWY-6803	phosphatidylcholine acyl editing
AF2641_RS01645	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AF2641_RS01645	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AF2641_RS01645	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AF2641_RS01645	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AF2641_RS01645	PWY-7470	phosphatidylcholine biosynthesis VII
AF2641_RS01645	PWY-7618	ricinoleate biosynthesis
AF2641_RS01760	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AF2641_RS01770	PWY-6012	acyl carrier protein metabolism I
AF2641_RS01770	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AF2641_RS01780	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS01780	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS01785	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS01785	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS01820	PWY-6679	jadomycin biosynthesis
AF2641_RS01820	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS01870	PWY-101	photosynthesis light reactions
AF2641_RS01945	PWY-5667	CDP-diacylglycerol biosynthesis I
AF2641_RS01945	PWY-5981	CDP-diacylglycerol biosynthesis III
AF2641_RS01945	PWY-6453	stigma estolide biosynthesis
AF2641_RS01945	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AF2641_RS01945	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AF2641_RS01945	PWY-7587	oleate biosynthesis III (cyanobacteria)
AF2641_RS01945	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AF2641_RS01945	PWY-7782	AF2641_RS01945
AF2641_RS01970	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AF2641_RS01970	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AF2641_RS01970	PWY-6936	seleno-amino acid biosynthesis
AF2641_RS01970	PWY-702	L-methionine biosynthesis II
AF2641_RS02050	PWY-6749	CMP-legionaminate biosynthesis I
AF2641_RS02055	PWY-6749	CMP-legionaminate biosynthesis I
AF2641_RS02080	PWY-31	canavanine degradation
AF2641_RS02080	PWY-4984	urea cycle
AF2641_RS02080	PWY-6305	putrescine biosynthesis IV
AF2641_RS02080	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AF2641_RS02240	PWY-7799	AF2641_RS02240
AF2641_RS02240	PWY-7800	AF2641_RS02240
AF2641_RS02245	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS02465	PWY-6936	seleno-amino acid biosynthesis
AF2641_RS02465	PWY-7274	D-cycloserine biosynthesis
AF2641_RS02470	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS02475	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS02480	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS02590	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AF2641_RS02590	PWY-6148	tetrahydromethanopterin biosynthesis
AF2641_RS02590	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AF2641_RS02590	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AF2641_RS02590	PWY-7852	AF2641_RS02590
AF2641_RS02590	PWY-7853	AF2641_RS02590
AF2641_RS02595	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AF2641_RS02595	PWY-6148	tetrahydromethanopterin biosynthesis
AF2641_RS02595	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AF2641_RS02595	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AF2641_RS02600	PWY-6614	tetrahydrofolate biosynthesis
AF2641_RS02610	PWY-5958	acridone alkaloid biosynthesis
AF2641_RS02610	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AF2641_RS02610	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AF2641_RS02615	PWY-5958	acridone alkaloid biosynthesis
AF2641_RS02615	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AF2641_RS02615	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AF2641_RS02620	PWY-6936	seleno-amino acid biosynthesis
AF2641_RS02630	PWY-3961	phosphopantothenate biosynthesis II
AF2641_RS02640	PWY-6599	guanine and guanosine salvage II
AF2641_RS02640	PWY-6609	adenine and adenosine salvage III
AF2641_RS02640	PWY-6610	adenine and adenosine salvage IV
AF2641_RS02640	PWY-6620	guanine and guanosine salvage
AF2641_RS02725	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AF2641_RS02740	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AF2641_RS02740	PWY-5667	CDP-diacylglycerol biosynthesis I
AF2641_RS02740	PWY-6453	stigma estolide biosynthesis
AF2641_RS02740	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AF2641_RS02740	PWY-7587	oleate biosynthesis III (cyanobacteria)
AF2641_RS02760	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS02815	PWY-2201	folate transformations I
AF2641_RS02840	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AF2641_RS02840	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS02840	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS02840	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AF2641_RS02840	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS02840	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS02930	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AF2641_RS02935	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AF2641_RS02940	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AF2641_RS02945	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AF2641_RS02945	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AF2641_RS02950	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AF2641_RS02950	PWY-6596	adenosine nucleotides degradation I
AF2641_RS02950	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS03115	PWY-7805	AF2641_RS03115
AF2641_RS03115	PWY-7807	AF2641_RS03115
AF2641_RS03130	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS03180	PWY-6825	phosphatidylcholine biosynthesis V
AF2641_RS03240	PWY-3162	L-tryptophan degradation V (side chain pathway)
AF2641_RS03240	PWY-5057	L-valine degradation II
AF2641_RS03240	PWY-5076	L-leucine degradation III
AF2641_RS03240	PWY-5078	L-isoleucine degradation II
AF2641_RS03240	PWY-5079	L-phenylalanine degradation III
AF2641_RS03240	PWY-5082	L-methionine degradation III
AF2641_RS03240	PWY-5480	pyruvate fermentation to ethanol I
AF2641_RS03240	PWY-5486	pyruvate fermentation to ethanol II
AF2641_RS03240	PWY-5751	phenylethanol biosynthesis
AF2641_RS03240	PWY-6313	serotonin degradation
AF2641_RS03240	PWY-6333	acetaldehyde biosynthesis I
AF2641_RS03240	PWY-6342	noradrenaline and adrenaline degradation
AF2641_RS03240	PWY-6587	pyruvate fermentation to ethanol III
AF2641_RS03240	PWY-6802	salidroside biosynthesis
AF2641_RS03240	PWY-6871	3-methylbutanol biosynthesis
AF2641_RS03240	PWY-7013	L-1,2-propanediol degradation
AF2641_RS03240	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AF2641_RS03240	PWY-7118	chitin degradation to ethanol
AF2641_RS03240	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AF2641_RS03260	PWY-2721	trehalose degradation III
AF2641_RS03260	PWY-2722	trehalose degradation IV
AF2641_RS03260	PWY-7459	kojibiose degradation
AF2641_RS03270	PWY-5480	pyruvate fermentation to ethanol I
AF2641_RS03270	PWY-5485	pyruvate fermentation to acetate IV
AF2641_RS03270	PWY-5493	reductive monocarboxylic acid cycle
AF2641_RS03315	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS03325	PWY-6556	pyrimidine ribonucleosides salvage II
AF2641_RS03325	PWY-7181	pyrimidine deoxyribonucleosides degradation
AF2641_RS03325	PWY-7193	pyrimidine ribonucleosides salvage I
AF2641_RS03325	PWY-7199	pyrimidine deoxyribonucleosides salvage
AF2641_RS03420	PWY-1281	sulfoacetaldehyde degradation I
AF2641_RS03420	PWY-5482	pyruvate fermentation to acetate II
AF2641_RS03420	PWY-5485	pyruvate fermentation to acetate IV
AF2641_RS03420	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS03420	PWY-6637	sulfolactate degradation II
AF2641_RS03425	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AF2641_RS03475	PWY-40	putrescine biosynthesis I
AF2641_RS03475	PWY-6305	putrescine biosynthesis IV
AF2641_RS03480	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS03480	PWY-4521	arsenite oxidation I (respiratory)
AF2641_RS03480	PWY-6692	Fe(II) oxidation
AF2641_RS03480	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS03510	PWY-1361	benzoyl-CoA degradation I (aerobic)
AF2641_RS03510	PWY-5109	2-methylbutanoate biosynthesis
AF2641_RS03510	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AF2641_RS03510	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AF2641_RS03510	PWY-5177	glutaryl-CoA degradation
AF2641_RS03510	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AF2641_RS03510	PWY-6435	4-hydroxybenzoate biosynthesis V
AF2641_RS03510	PWY-6583	pyruvate fermentation to butanol I
AF2641_RS03510	PWY-6863	pyruvate fermentation to hexanol
AF2641_RS03510	PWY-6883	pyruvate fermentation to butanol II
AF2641_RS03510	PWY-6944	androstenedione degradation
AF2641_RS03510	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AF2641_RS03510	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AF2641_RS03510	PWY-7007	methyl ketone biosynthesis
AF2641_RS03510	PWY-7046	4-coumarate degradation (anaerobic)
AF2641_RS03510	PWY-7094	fatty acid salvage
AF2641_RS03510	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AF2641_RS03510	PWY-735	jasmonic acid biosynthesis
AF2641_RS03510	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AF2641_RS03510	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AF2641_RS03510	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AF2641_RS03510	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AF2641_RS03510	PWY-7726	AF2641_RS03510
AF2641_RS03510	PWY-7778	AF2641_RS03510
AF2641_RS03510	PWY-7779	AF2641_RS03510
AF2641_RS03510	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AF2641_RS03540	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AF2641_RS03540	PWY-7177	UTP and CTP dephosphorylation II
AF2641_RS03540	PWY-7185	UTP and CTP dephosphorylation I
AF2641_RS03555	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS03555	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AF2641_RS03555	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS03555	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS03555	PWY-7385	1,3-propanediol biosynthesis (engineered)
AF2641_RS03560	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AF2641_RS03560	PWY-5723	Rubisco shunt
AF2641_RS03565	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS03565	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS03570	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS03575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS03585	PWY-7199	pyrimidine deoxyribonucleosides salvage
AF2641_RS03635	PWY-1622	formaldehyde assimilation I (serine pathway)
AF2641_RS03635	PWY-181	photorespiration
AF2641_RS03635	PWY-2161	folate polyglutamylation
AF2641_RS03635	PWY-2201	folate transformations I
AF2641_RS03635	PWY-3661	glycine betaine degradation I
AF2641_RS03635	PWY-3661-1	glycine betaine degradation II (mammalian)
AF2641_RS03635	PWY-3841	folate transformations II
AF2641_RS03635	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS03640	PWY-7183	pyrimidine nucleobases salvage I
AF2641_RS03680	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS03690	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS03765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS03765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS03810	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AF2641_RS03810	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AF2641_RS03810	PWY-5989	stearate biosynthesis II (bacteria and plants)
AF2641_RS03810	PWY-5994	palmitate biosynthesis I (animals and fungi)
AF2641_RS03810	PWY-6113	superpathway of mycolate biosynthesis
AF2641_RS03810	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AF2641_RS03810	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AF2641_RS03810	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS03810	PWY-7663	gondoate biosynthesis (anaerobic)
AF2641_RS03810	PWY-7664	oleate biosynthesis IV (anaerobic)
AF2641_RS03810	PWY-7858	AF2641_RS03810
AF2641_RS03810	PWYG-321	mycolate biosynthesis
AF2641_RS03845	PWY-3801	sucrose degradation II (sucrose synthase)
AF2641_RS03845	PWY-6527	stachyose degradation
AF2641_RS03845	PWY-7238	sucrose biosynthesis II
AF2641_RS03845	PWY-7343	UDP-glucose biosynthesis
AF2641_RS03845	PWY-7817	AF2641_RS03845
AF2641_RS03855	PWY-5481	pyruvate fermentation to lactate
AF2641_RS03855	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AF2641_RS03855	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS03860	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AF2641_RS03860	PWY-5739	GDP-D-perosamine biosynthesis
AF2641_RS03860	PWY-5740	GDP-L-colitose biosynthesis
AF2641_RS03860	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AF2641_RS03860	PWY-7573	GDP-mycosamine biosynthesis
AF2641_RS03890	PWY-6936	seleno-amino acid biosynthesis
AF2641_RS03890	PWY-7274	D-cycloserine biosynthesis
AF2641_RS03930	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AF2641_RS03930	PWY-622	starch biosynthesis
AF2641_RS03935	PWY-5659	GDP-mannose biosynthesis
AF2641_RS03935	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AF2641_RS03945	PWY-6749	CMP-legionaminate biosynthesis I
AF2641_RS03955	PWY-3861	mannitol degradation II
AF2641_RS03955	PWY-3881	mannitol biosynthesis
AF2641_RS03955	PWY-5659	GDP-mannose biosynthesis
AF2641_RS03955	PWY-6992	1,5-anhydrofructose degradation
AF2641_RS03955	PWY-7456	mannan degradation
AF2641_RS03955	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AF2641_RS03955	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AF2641_RS03995	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AF2641_RS03995	PWY-7820	AF2641_RS03995
AF2641_RS04000	PWY-3821	galactose degradation III
AF2641_RS04000	PWY-6317	galactose degradation I (Leloir pathway)
AF2641_RS04000	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AF2641_RS04000	PWY-6527	stachyose degradation
AF2641_RS04000	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AF2641_RS04000	PWY-7344	UDP-D-galactose biosynthesis
AF2641_RS04065	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AF2641_RS04065	PWY-622	starch biosynthesis
AF2641_RS04065	PWY-7815	AF2641_RS04065
AF2641_RS04065	PWY-7816	AF2641_RS04065
AF2641_RS04065	PWY-7819	AF2641_RS04065
AF2641_RS04100	PWY-2941	L-lysine biosynthesis II
AF2641_RS04100	PWY-2942	L-lysine biosynthesis III
AF2641_RS04100	PWY-5097	L-lysine biosynthesis VI
AF2641_RS04100	PWY-6559	spermidine biosynthesis II
AF2641_RS04100	PWY-6562	norspermidine biosynthesis
AF2641_RS04100	PWY-7153	grixazone biosynthesis
AF2641_RS04225	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AF2641_RS04225	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AF2641_RS04225	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AF2641_RS04485	PWY-7805	AF2641_RS04485
AF2641_RS04485	PWY-7807	AF2641_RS04485
AF2641_RS04595	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS04595	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS04595	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS04595	PWY-7003	glycerol degradation to butanol
AF2641_RS04600	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS04600	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS04600	PWY-6886	1-butanol autotrophic biosynthesis
AF2641_RS04600	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS04600	PWY-7003	glycerol degradation to butanol
AF2641_RS04605	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS04605	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS04605	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS04605	PWY-7003	glycerol degradation to butanol
AF2641_RS04610	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS04610	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AF2641_RS04610	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS04610	PWY-5723	Rubisco shunt
AF2641_RS04610	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS04610	PWY-6886	1-butanol autotrophic biosynthesis
AF2641_RS04610	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS04610	PWY-7003	glycerol degradation to butanol
AF2641_RS04610	PWY-7124	ethylene biosynthesis V (engineered)
AF2641_RS04610	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AF2641_RS04615	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS04615	PWY-1622	formaldehyde assimilation I (serine pathway)
AF2641_RS04615	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AF2641_RS04615	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS04615	PWY-5723	Rubisco shunt
AF2641_RS04615	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS04615	PWY-6886	1-butanol autotrophic biosynthesis
AF2641_RS04615	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS04615	PWY-7003	glycerol degradation to butanol
AF2641_RS04615	PWY-7124	ethylene biosynthesis V (engineered)
AF2641_RS04615	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AF2641_RS04775	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AF2641_RS04775	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AF2641_RS04785	PWY-1361	benzoyl-CoA degradation I (aerobic)
AF2641_RS04785	PWY-5109	2-methylbutanoate biosynthesis
AF2641_RS04785	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AF2641_RS04785	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AF2641_RS04785	PWY-5177	glutaryl-CoA degradation
AF2641_RS04785	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AF2641_RS04785	PWY-6435	4-hydroxybenzoate biosynthesis V
AF2641_RS04785	PWY-6583	pyruvate fermentation to butanol I
AF2641_RS04785	PWY-6863	pyruvate fermentation to hexanol
AF2641_RS04785	PWY-6883	pyruvate fermentation to butanol II
AF2641_RS04785	PWY-6944	androstenedione degradation
AF2641_RS04785	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AF2641_RS04785	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AF2641_RS04785	PWY-7007	methyl ketone biosynthesis
AF2641_RS04785	PWY-7046	4-coumarate degradation (anaerobic)
AF2641_RS04785	PWY-7094	fatty acid salvage
AF2641_RS04785	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AF2641_RS04785	PWY-735	jasmonic acid biosynthesis
AF2641_RS04785	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AF2641_RS04785	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AF2641_RS04785	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AF2641_RS04785	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AF2641_RS04785	PWY-7726	AF2641_RS04785
AF2641_RS04785	PWY-7778	AF2641_RS04785
AF2641_RS04785	PWY-7779	AF2641_RS04785
AF2641_RS04785	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AF2641_RS04875	PWY-6823	molybdenum cofactor biosynthesis
AF2641_RS04875	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS04875	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS04875	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AF2641_RS05085	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AF2641_RS05085	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AF2641_RS05150	PWY-702	L-methionine biosynthesis II
AF2641_RS05180	PWY-2941	L-lysine biosynthesis II
AF2641_RS05180	PWY-5097	L-lysine biosynthesis VI
AF2641_RS05195	PWY-101	photosynthesis light reactions
AF2641_RS05240	PWY-6854	ethylene biosynthesis III (microbes)
AF2641_RS05275	PWY-3801	sucrose degradation II (sucrose synthase)
AF2641_RS05275	PWY-5054	sorbitol biosynthesis I
AF2641_RS05275	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AF2641_RS05275	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AF2641_RS05275	PWY-5659	GDP-mannose biosynthesis
AF2641_RS05275	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS05275	PWY-621	sucrose degradation III (sucrose invertase)
AF2641_RS05275	PWY-622	starch biosynthesis
AF2641_RS05275	PWY-6981	chitin biosynthesis
AF2641_RS05275	PWY-6992	1,5-anhydrofructose degradation
AF2641_RS05275	PWY-7238	sucrose biosynthesis II
AF2641_RS05275	PWY-7347	sucrose biosynthesis III
AF2641_RS05275	PWY-7385	1,3-propanediol biosynthesis (engineered)
AF2641_RS05590	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AF2641_RS05590	PWY-622	starch biosynthesis
AF2641_RS05595	PWY-622	starch biosynthesis
AF2641_RS05605	PWY-622	starch biosynthesis
AF2641_RS05610	PWY-5941	glycogen degradation II (eukaryotic)
AF2641_RS05610	PWY-6731	starch degradation III
AF2641_RS05610	PWY-6737	starch degradation V
AF2641_RS05610	PWY-7238	sucrose biosynthesis II
AF2641_RS05620	PWY-5839	menaquinol-7 biosynthesis
AF2641_RS05620	PWY-5851	demethylmenaquinol-9 biosynthesis
AF2641_RS05620	PWY-5852	demethylmenaquinol-8 biosynthesis I
AF2641_RS05620	PWY-5853	demethylmenaquinol-6 biosynthesis I
AF2641_RS05620	PWY-5890	menaquinol-10 biosynthesis
AF2641_RS05620	PWY-5891	menaquinol-11 biosynthesis
AF2641_RS05620	PWY-5892	menaquinol-12 biosynthesis
AF2641_RS05620	PWY-5895	menaquinol-13 biosynthesis
AF2641_RS05625	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AF2641_RS05625	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AF2641_RS05625	PWY-5958	acridone alkaloid biosynthesis
AF2641_RS05625	PWY-6406	salicylate biosynthesis I
AF2641_RS05625	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AF2641_RS05625	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AF2641_RS05630	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AF2641_RS05635	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AF2641_RS05640	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AF2641_RS05645	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AF2641_RS05675	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AF2641_RS05675	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS05675	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS05675	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS05675	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS05675	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS05675	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS05675	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AF2641_RS05690	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AF2641_RS05690	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS05690	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS05690	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS05690	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS05690	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS05690	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS05690	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AF2641_RS05720	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AF2641_RS05720	PWY-6153	autoinducer AI-2 biosynthesis I
AF2641_RS05720	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AF2641_RS05740	PWY-6502	oxidized GTP and dGTP detoxification
AF2641_RS05795	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AF2641_RS05795	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AF2641_RS05815	PWY-5773	gossypol biosynthesis
AF2641_RS05815	PWY-5828	lacinilene C biosynthesis
AF2641_RS05970	PWY-5381	pyridine nucleotide cycling (plants)
AF2641_RS05975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS05975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS06005	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AF2641_RS06005	PWY-3461	L-tyrosine biosynthesis II
AF2641_RS06005	PWY-3462	L-phenylalanine biosynthesis II
AF2641_RS06005	PWY-6120	L-tyrosine biosynthesis III
AF2641_RS06005	PWY-6164	3-dehydroquinate biosynthesis I
AF2641_RS06005	PWY-6627	salinosporamide A biosynthesis
AF2641_RS06005	PWY-7626	bacilysin biosynthesis
AF2641_RS06005	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AF2641_RS06080	PWY-6823	molybdenum cofactor biosynthesis
AF2641_RS06080	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS06080	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS06080	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AF2641_RS06135	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AF2641_RS06135	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AF2641_RS06135	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AF2641_RS06160	PWY-5482	pyruvate fermentation to acetate II
AF2641_RS06160	PWY-5485	pyruvate fermentation to acetate IV
AF2641_RS06160	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS06170	PWY-4983	L-citrulline-nitric oxide cycle
AF2641_RS06170	PWY-4984	urea cycle
AF2641_RS06170	PWY-5	canavanine biosynthesis
AF2641_RS06170	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS06170	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS06175	PWY-4983	L-citrulline-nitric oxide cycle
AF2641_RS06175	PWY-4984	urea cycle
AF2641_RS06175	PWY-5	canavanine biosynthesis
AF2641_RS06175	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS06175	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS06190	PWY-7799	AF2641_RS06190
AF2641_RS06190	PWY-7800	AF2641_RS06190
AF2641_RS06200	PWY-1281	sulfoacetaldehyde degradation I
AF2641_RS06200	PWY-5482	pyruvate fermentation to acetate II
AF2641_RS06200	PWY-5485	pyruvate fermentation to acetate IV
AF2641_RS06200	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS06200	PWY-6637	sulfolactate degradation II
AF2641_RS06210	PWY-7805	AF2641_RS06210
AF2641_RS06210	PWY-7807	AF2641_RS06210
AF2641_RS06240	PWY-6679	jadomycin biosynthesis
AF2641_RS06240	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS06245	PWY-6679	jadomycin biosynthesis
AF2641_RS06245	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS06250	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS06250	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AF2641_RS06250	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS06250	PWY-7385	1,3-propanediol biosynthesis (engineered)
AF2641_RS06255	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS06255	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AF2641_RS06255	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS06255	PWY-5723	Rubisco shunt
AF2641_RS06255	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS06255	PWY-6886	1-butanol autotrophic biosynthesis
AF2641_RS06255	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS06255	PWY-7003	glycerol degradation to butanol
AF2641_RS06255	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AF2641_RS06255	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AF2641_RS06280	PWY-5913	TCA cycle VI (obligate autotrophs)
AF2641_RS06280	PWY-6549	L-glutamine biosynthesis III
AF2641_RS06280	PWY-6728	methylaspartate cycle
AF2641_RS06280	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS06280	PWY-7124	ethylene biosynthesis V (engineered)
AF2641_RS06280	PWY-7254	TCA cycle VII (acetate-producers)
AF2641_RS06280	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AF2641_RS06285	PWY-1622	formaldehyde assimilation I (serine pathway)
AF2641_RS06285	PWY-5392	reductive TCA cycle II
AF2641_RS06285	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AF2641_RS06285	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS06285	PWY-5913	TCA cycle VI (obligate autotrophs)
AF2641_RS06285	PWY-6728	methylaspartate cycle
AF2641_RS06285	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS06285	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AF2641_RS06285	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AF2641_RS06320	PWY-7851	AF2641_RS06320
AF2641_RS06325	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS06325	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS06325	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS06325	PWY-7003	glycerol degradation to butanol
AF2641_RS06330	PWY-6834	spermidine biosynthesis III
AF2641_RS06405	PWY-6527	stachyose degradation
AF2641_RS06410	PWY-3821	galactose degradation III
AF2641_RS06410	PWY-6317	galactose degradation I (Leloir pathway)
AF2641_RS06410	PWY-6527	stachyose degradation
AF2641_RS06415	PWY-3821	galactose degradation III
AF2641_RS06415	PWY-6317	galactose degradation I (Leloir pathway)
AF2641_RS06415	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AF2641_RS06415	PWY-6527	stachyose degradation
AF2641_RS06415	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AF2641_RS06415	PWY-7344	UDP-D-galactose biosynthesis
AF2641_RS06420	PWY-6317	galactose degradation I (Leloir pathway)
AF2641_RS06420	PWY-6527	stachyose degradation
AF2641_RS06425	PWY-6807	xyloglucan degradation II (exoglucanase)
AF2641_RS06435	PWY-6317	galactose degradation I (Leloir pathway)
AF2641_RS06745	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS06745	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AF2641_RS06745	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AF2641_RS06745	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS06745	PWY-6728	methylaspartate cycle
AF2641_RS06745	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS06745	PWY-7254	TCA cycle VII (acetate-producers)
AF2641_RS06745	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS06750	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS06750	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AF2641_RS06750	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AF2641_RS06750	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS06750	PWY-6728	methylaspartate cycle
AF2641_RS06750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS06750	PWY-7254	TCA cycle VII (acetate-producers)
AF2641_RS06750	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS06765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS06765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS06795	PWY-5057	L-valine degradation II
AF2641_RS06795	PWY-5076	L-leucine degradation III
AF2641_RS06795	PWY-5078	L-isoleucine degradation II
AF2641_RS06795	PWY-5101	L-isoleucine biosynthesis II
AF2641_RS06795	PWY-5103	L-isoleucine biosynthesis III
AF2641_RS06795	PWY-5104	L-isoleucine biosynthesis IV
AF2641_RS06795	PWY-5108	L-isoleucine biosynthesis V
AF2641_RS06795	PWY-7767	AF2641_RS06795
AF2641_RS06800	PWY-5101	L-isoleucine biosynthesis II
AF2641_RS06800	PWY-5103	L-isoleucine biosynthesis III
AF2641_RS06800	PWY-5104	L-isoleucine biosynthesis IV
AF2641_RS06800	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AF2641_RS06800	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AF2641_RS06800	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AF2641_RS06800	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AF2641_RS06805	PWY-5101	L-isoleucine biosynthesis II
AF2641_RS06805	PWY-5103	L-isoleucine biosynthesis III
AF2641_RS06805	PWY-5104	L-isoleucine biosynthesis IV
AF2641_RS06805	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AF2641_RS06805	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AF2641_RS06805	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AF2641_RS06805	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AF2641_RS06810	PWY-5103	L-isoleucine biosynthesis III
AF2641_RS06810	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AF2641_RS06815	PWY-6871	3-methylbutanol biosynthesis
AF2641_RS06820	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AF2641_RS06870	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS06880	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS06880	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AF2641_RS06885	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS06885	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AF2641_RS06890	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS06890	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AF2641_RS06895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS06920	PWY-2161	folate polyglutamylation
AF2641_RS07090	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AF2641_RS07100	PWY-6823	molybdenum cofactor biosynthesis
AF2641_RS07100	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS07100	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS07100	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AF2641_RS07105	PWY-5316	nicotine biosynthesis
AF2641_RS07105	PWY-7342	superpathway of nicotine biosynthesis
AF2641_RS07110	PWY-5316	nicotine biosynthesis
AF2641_RS07110	PWY-5381	pyridine nucleotide cycling (plants)
AF2641_RS07110	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AF2641_RS07110	PWY-7342	superpathway of nicotine biosynthesis
AF2641_RS07115	PWY-5316	nicotine biosynthesis
AF2641_RS07115	PWY-7342	superpathway of nicotine biosynthesis
AF2641_RS07165	PWY-6700	queuosine biosynthesis
AF2641_RS07170	PWY-6700	queuosine biosynthesis
AF2641_RS07210	PWY-7805	AF2641_RS07210
AF2641_RS07210	PWY-7807	AF2641_RS07210
AF2641_RS07215	PWY-6605	adenine and adenosine salvage II
AF2641_RS07215	PWY-6610	adenine and adenosine salvage IV
AF2641_RS07215	PWY-7805	AF2641_RS07215
AF2641_RS07215	PWY-7807	AF2641_RS07215
AF2641_RS07275	PWY-6823	molybdenum cofactor biosynthesis
AF2641_RS07275	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS07275	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS07275	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AF2641_RS07355	PWY-7193	pyrimidine ribonucleosides salvage I
AF2641_RS07385	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AF2641_RS07385	PWY-6153	autoinducer AI-2 biosynthesis I
AF2641_RS07385	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AF2641_RS07390	PWY-6936	seleno-amino acid biosynthesis
AF2641_RS07475	PWY-5669	phosphatidylethanolamine biosynthesis I
AF2641_RS07480	PWY-5669	phosphatidylethanolamine biosynthesis I
AF2641_RS07500	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AF2641_RS07510	PWY-5381	pyridine nucleotide cycling (plants)
AF2641_RS07510	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AF2641_RS07510	PWY-7761	AF2641_RS07510
AF2641_RS07530	PWY-3341	L-proline biosynthesis III
AF2641_RS07530	PWY-4981	L-proline biosynthesis II (from arginine)
AF2641_RS07530	PWY-6344	L-ornithine degradation II (Stickland reaction)
AF2641_RS07540	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS07620	PWY-2201	folate transformations I
AF2641_RS07675	PWY-7039	phosphatidate metabolism, as a signaling molecule
AF2641_RS07675	PWY-7817	AF2641_RS07675
AF2641_RS07735	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS07815	PWY-6854	ethylene biosynthesis III (microbes)
AF2641_RS07865	PWY-6749	CMP-legionaminate biosynthesis I
AF2641_RS07880	PWY-5481	pyruvate fermentation to lactate
AF2641_RS07880	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS07910	PWY-2722	trehalose degradation IV
AF2641_RS07910	PWY-2723	trehalose degradation V
AF2641_RS07910	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AF2641_RS07910	PWY-5661	GDP-glucose biosynthesis
AF2641_RS07910	PWY-621	sucrose degradation III (sucrose invertase)
AF2641_RS07910	PWY-7238	sucrose biosynthesis II
AF2641_RS07910	PWY-7385	1,3-propanediol biosynthesis (engineered)
AF2641_RS07990	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AF2641_RS08030	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AF2641_RS08030	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AF2641_RS08035	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AF2641_RS08035	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS08035	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS08035	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS08035	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08035	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08035	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS08035	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AF2641_RS08040	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AF2641_RS08040	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS08040	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS08040	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS08040	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08040	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08040	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS08040	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AF2641_RS08075	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AF2641_RS08075	PWY-6416	quinate degradation II
AF2641_RS08075	PWY-6707	gallate biosynthesis
AF2641_RS08080	PWY-7799	AF2641_RS08080
AF2641_RS08080	PWY-7800	AF2641_RS08080
AF2641_RS08165	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AF2641_RS08165	PWY-2201	folate transformations I
AF2641_RS08165	PWY-3841	folate transformations II
AF2641_RS08165	PWY-5030	L-histidine degradation III
AF2641_RS08165	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS08165	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AF2641_RS08185	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS08185	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS08185	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS08230	PWY-2941	L-lysine biosynthesis II
AF2641_RS08230	PWY-2942	L-lysine biosynthesis III
AF2641_RS08230	PWY-5097	L-lysine biosynthesis VI
AF2641_RS08235	PWY-1281	sulfoacetaldehyde degradation I
AF2641_RS08235	PWY-5482	pyruvate fermentation to acetate II
AF2641_RS08235	PWY-5485	pyruvate fermentation to acetate IV
AF2641_RS08235	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS08235	PWY-6637	sulfolactate degradation II
AF2641_RS08245	PWY-5482	pyruvate fermentation to acetate II
AF2641_RS08245	PWY-5485	pyruvate fermentation to acetate IV
AF2641_RS08245	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS08250	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AF2641_RS08250	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AF2641_RS08270	PWY-5743	3-hydroxypropanoate cycle
AF2641_RS08270	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AF2641_RS08270	PWY-6728	methylaspartate cycle
AF2641_RS08270	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AF2641_RS08270	PWY-7854	AF2641_RS08270
AF2641_RS08295	PWY-5741	ethylmalonyl-CoA pathway
AF2641_RS08295	PWY-5743	3-hydroxypropanoate cycle
AF2641_RS08295	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AF2641_RS08295	PWY-6728	methylaspartate cycle
AF2641_RS08295	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AF2641_RS08295	PWY-7854	AF2641_RS08295
AF2641_RS08300	PWY-6679	jadomycin biosynthesis
AF2641_RS08300	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS08325	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AF2641_RS08325	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AF2641_RS08325	PWY-7717	AF2641_RS08325
AF2641_RS08325	PWY-7733	AF2641_RS08325
AF2641_RS08325	PWY-7734	AF2641_RS08325
AF2641_RS08325	PWY-7765	AF2641_RS08325
AF2641_RS08330	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AF2641_RS08370	PWY-3341	L-proline biosynthesis III
AF2641_RS08370	PWY-4981	L-proline biosynthesis II (from arginine)
AF2641_RS08370	PWY-6344	L-ornithine degradation II (Stickland reaction)
AF2641_RS08445	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS08450	PWY-4202	arsenate detoxification I (glutaredoxin)
AF2641_RS08450	PWY-5532	adenosine nucleotides degradation IV
AF2641_RS08450	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AF2641_RS08450	PWY-6608	guanosine nucleotides degradation III
AF2641_RS08450	PWY-6609	adenine and adenosine salvage III
AF2641_RS08450	PWY-6611	adenine and adenosine salvage V
AF2641_RS08450	PWY-6620	guanine and guanosine salvage
AF2641_RS08450	PWY-6627	salinosporamide A biosynthesis
AF2641_RS08450	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AF2641_RS08450	PWY-7179	purine deoxyribonucleosides degradation I
AF2641_RS08450	PWY-7179-1	purine deoxyribonucleosides degradation
AF2641_RS08455	PWY-7181	pyrimidine deoxyribonucleosides degradation
AF2641_RS08460	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AF2641_RS08460	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AF2641_RS08515	PWY-2941	L-lysine biosynthesis II
AF2641_RS08515	PWY-2942	L-lysine biosynthesis III
AF2641_RS08515	PWY-5097	L-lysine biosynthesis VI
AF2641_RS08530	PWY-5525	D-glucuronate degradation I
AF2641_RS08535	PWY-6167	flavin biosynthesis II (archaea)
AF2641_RS08535	PWY-6168	flavin biosynthesis III (fungi)
AF2641_RS08535	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS08540	PWY-6167	flavin biosynthesis II (archaea)
AF2641_RS08540	PWY-6168	flavin biosynthesis III (fungi)
AF2641_RS08540	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AF2641_RS08545	PWY-6167	flavin biosynthesis II (archaea)
AF2641_RS08545	PWY-6168	flavin biosynthesis III (fungi)
AF2641_RS08610	PWY-6854	ethylene biosynthesis III (microbes)
AF2641_RS08685	PWY-5443	aminopropanol phosphate biosynthesis I
AF2641_RS08690	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AF2641_RS08690	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AF2641_RS08690	PWY-6269	adenosylcobalamin salvage from cobinamide II
AF2641_RS08695	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AF2641_RS08695	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AF2641_RS08695	PWY-6269	adenosylcobalamin salvage from cobinamide II
AF2641_RS08705	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AF2641_RS08705	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AF2641_RS08705	PWY-6269	adenosylcobalamin salvage from cobinamide II
AF2641_RS08710	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AF2641_RS08710	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AF2641_RS08710	PWY-6268	adenosylcobalamin salvage from cobalamin
AF2641_RS08710	PWY-6269	adenosylcobalamin salvage from cobinamide II
AF2641_RS08740	PWY-7805	AF2641_RS08740
AF2641_RS08740	PWY-7807	AF2641_RS08740
AF2641_RS08825	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AF2641_RS08860	PWY-7205	CMP phosphorylation
AF2641_RS08875	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AF2641_RS08875	PWY-6174	mevalonate pathway II (archaea)
AF2641_RS08875	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AF2641_RS08875	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AF2641_RS08875	PWY-7102	bisabolene biosynthesis
AF2641_RS08875	PWY-7391	isoprene biosynthesis II (engineered)
AF2641_RS08875	PWY-7524	mevalonate pathway III (archaea)
AF2641_RS08875	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS08875	PWY-922	mevalonate pathway I
AF2641_RS08905	PWY-5667	CDP-diacylglycerol biosynthesis I
AF2641_RS08905	PWY-5981	CDP-diacylglycerol biosynthesis III
AF2641_RS08930	PWY-5663	tetrahydrobiopterin biosynthesis I
AF2641_RS08930	PWY-5664	tetrahydrobiopterin biosynthesis II
AF2641_RS08930	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AF2641_RS08930	PWY-6703	preQ<sub>0</sub> biosynthesis
AF2641_RS08930	PWY-6983	tetrahydrobiopterin biosynthesis III
AF2641_RS08930	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AF2641_RS08930	PWY-7852	AF2641_RS08930
AF2641_RS08940	PWY-5807	heptaprenyl diphosphate biosynthesis
AF2641_RS08945	PWY-5839	menaquinol-7 biosynthesis
AF2641_RS08945	PWY-5844	menaquinol-9 biosynthesis
AF2641_RS08945	PWY-5849	menaquinol-6 biosynthesis
AF2641_RS08945	PWY-5890	menaquinol-10 biosynthesis
AF2641_RS08945	PWY-5891	menaquinol-11 biosynthesis
AF2641_RS08945	PWY-5892	menaquinol-12 biosynthesis
AF2641_RS08945	PWY-5895	menaquinol-13 biosynthesis
AF2641_RS08950	PWY-5807	heptaprenyl diphosphate biosynthesis
AF2641_RS08955	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AF2641_RS08955	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AF2641_RS08955	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS08955	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08955	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AF2641_RS08955	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS08955	PWY-7205	CMP phosphorylation
AF2641_RS08955	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS08955	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08955	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS08955	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS08955	PWY-7224	purine deoxyribonucleosides salvage
AF2641_RS08955	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS08955	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AF2641_RS08965	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AF2641_RS08970	PWY-6164	3-dehydroquinate biosynthesis I
AF2641_RS08975	PWY-3461	L-tyrosine biosynthesis II
AF2641_RS08975	PWY-3462	L-phenylalanine biosynthesis II
AF2641_RS08975	PWY-6120	L-tyrosine biosynthesis III
AF2641_RS08975	PWY-6627	salinosporamide A biosynthesis
AF2641_RS08975	PWY-7626	bacilysin biosynthesis
AF2641_RS08980	PWY-5958	acridone alkaloid biosynthesis
AF2641_RS08980	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AF2641_RS08980	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AF2641_RS09015	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AF2641_RS09020	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AF2641_RS09075	PWY-2941	L-lysine biosynthesis II
AF2641_RS09075	PWY-2942	L-lysine biosynthesis III
AF2641_RS09075	PWY-5097	L-lysine biosynthesis VI
AF2641_RS09105	PWY-6654	phosphopantothenate biosynthesis III
AF2641_RS09115	PWY-5155	&beta;-alanine biosynthesis III
AF2641_RS09205	PWY-4261	glycerol degradation I
AF2641_RS09205	PWY-6118	glycerol-3-phosphate shuttle
AF2641_RS09205	PWY-6952	glycerophosphodiester degradation
AF2641_RS09275	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AF2641_RS09275	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AF2641_RS09275	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AF2641_RS09285	PWY-2201	folate transformations I
AF2641_RS09285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AF2641_RS09290	PWY-6834	spermidine biosynthesis III
AF2641_RS09375	PWY-6823	molybdenum cofactor biosynthesis
AF2641_RS09375	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS09375	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS09375	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AF2641_RS09450	PWY-5506	methanol oxidation to formaldehyde IV
AF2641_RS09455	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AF2641_RS09630	PWY-5101	L-isoleucine biosynthesis II
AF2641_RS09630	PWY-5103	L-isoleucine biosynthesis III
AF2641_RS09630	PWY-5104	L-isoleucine biosynthesis IV
AF2641_RS09630	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AF2641_RS09760	PWY-3341	L-proline biosynthesis III
AF2641_RS09760	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AF2641_RS09765	PWY-3341	L-proline biosynthesis III
AF2641_RS09765	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AF2641_RS09795	PWY-5132	humulone biosynthesis
AF2641_RS09795	PWY-5133	cohumulone biosynthesis
AF2641_RS09795	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AF2641_RS09795	PWY-7118	chitin degradation to ethanol
AF2641_RS09795	PWY-7857	AF2641_RS09795
AF2641_RS09980	PWY-1042	glycolysis IV (plant cytosol)
AF2641_RS09980	PWY-1622	formaldehyde assimilation I (serine pathway)
AF2641_RS09980	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AF2641_RS09980	PWY-5484	glycolysis II (from fructose 6-phosphate)
AF2641_RS09980	PWY-5723	Rubisco shunt
AF2641_RS09980	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AF2641_RS09980	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS09980	PWY-6886	1-butanol autotrophic biosynthesis
AF2641_RS09980	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS09980	PWY-7003	glycerol degradation to butanol
AF2641_RS09980	PWY-7124	ethylene biosynthesis V (engineered)
AF2641_RS09980	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AF2641_RS10135	PWY-6897	thiamin salvage II
AF2641_RS10135	PWY-7356	thiamin salvage IV (yeast)
AF2641_RS10135	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AF2641_RS10140	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AF2641_RS10140	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AF2641_RS10140	PWY-6897	thiamin salvage II
AF2641_RS10140	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AF2641_RS10140	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AF2641_RS10140	PWY-7356	thiamin salvage IV (yeast)
AF2641_RS10140	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AF2641_RS10195	PWY-6825	phosphatidylcholine biosynthesis V
AF2641_RS10210	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS10210	PWY-4521	arsenite oxidation I (respiratory)
AF2641_RS10210	PWY-6692	Fe(II) oxidation
AF2641_RS10210	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS10220	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS10220	PWY-4521	arsenite oxidation I (respiratory)
AF2641_RS10220	PWY-6692	Fe(II) oxidation
AF2641_RS10220	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS10235	PWY-5135	xanthohumol biosynthesis
AF2641_RS10235	PWY-6316	aromatic polyketides biosynthesis
AF2641_RS10235	PWY-6787	flavonoid biosynthesis (in equisetum)
AF2641_RS10235	PWY-7397	naringenin biosynthesis (engineered)
AF2641_RS10305	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AF2641_RS10335	PWY-4202	arsenate detoxification I (glutaredoxin)
AF2641_RS10335	PWY-5532	adenosine nucleotides degradation IV
AF2641_RS10335	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AF2641_RS10335	PWY-6608	guanosine nucleotides degradation III
AF2641_RS10335	PWY-6609	adenine and adenosine salvage III
AF2641_RS10335	PWY-6611	adenine and adenosine salvage V
AF2641_RS10335	PWY-6620	guanine and guanosine salvage
AF2641_RS10335	PWY-6627	salinosporamide A biosynthesis
AF2641_RS10335	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AF2641_RS10335	PWY-7179	purine deoxyribonucleosides degradation I
AF2641_RS10335	PWY-7179-1	purine deoxyribonucleosides degradation
AF2641_RS10450	PWY-381	nitrate reduction II (assimilatory)
AF2641_RS10450	PWY-5675	nitrate reduction V (assimilatory)
AF2641_RS10450	PWY-6549	L-glutamine biosynthesis III
AF2641_RS10450	PWY-6963	ammonia assimilation cycle I
AF2641_RS10450	PWY-6964	ammonia assimilation cycle II
AF2641_RS10610	PWY-2201	folate transformations I
AF2641_RS10610	PWY-5497	purine nucleobases degradation II (anaerobic)
AF2641_RS10640	PWY-6619	adenine and adenosine salvage VI
AF2641_RS10670	PWY-6825	phosphatidylcholine biosynthesis V
AF2641_RS10705	PWY-3841	folate transformations II
AF2641_RS10705	PWY-6614	tetrahydrofolate biosynthesis
AF2641_RS10710	PWY-3841	folate transformations II
AF2641_RS10710	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AF2641_RS10710	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AF2641_RS10710	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AF2641_RS10710	PWY-7199	pyrimidine deoxyribonucleosides salvage
AF2641_RS10710	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AF2641_RS10845	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AF2641_RS10845	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AF2641_RS10860	PWY-6619	adenine and adenosine salvage VI
AF2641_RS10890	PWY-4261	glycerol degradation I
AF2641_RS10995	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AF2641_RS10995	PWY-5723	Rubisco shunt
AF2641_RS10995	PWY-6891	thiazole biosynthesis II (Bacillus)
AF2641_RS10995	PWY-6892	thiazole biosynthesis I (E. coli)
AF2641_RS10995	PWY-6901	superpathway of glucose and xylose degradation
AF2641_RS10995	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS11020	PWY-381	nitrate reduction II (assimilatory)
AF2641_RS11020	PWY-5675	nitrate reduction V (assimilatory)
AF2641_RS11020	PWY-6549	L-glutamine biosynthesis III
AF2641_RS11020	PWY-6963	ammonia assimilation cycle I
AF2641_RS11020	PWY-6964	ammonia assimilation cycle II
AF2641_RS11050	PWY-1361	benzoyl-CoA degradation I (aerobic)
AF2641_RS11050	PWY-5109	2-methylbutanoate biosynthesis
AF2641_RS11050	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AF2641_RS11050	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AF2641_RS11050	PWY-5177	glutaryl-CoA degradation
AF2641_RS11050	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AF2641_RS11050	PWY-6435	4-hydroxybenzoate biosynthesis V
AF2641_RS11050	PWY-6583	pyruvate fermentation to butanol I
AF2641_RS11050	PWY-6863	pyruvate fermentation to hexanol
AF2641_RS11050	PWY-6883	pyruvate fermentation to butanol II
AF2641_RS11050	PWY-6944	androstenedione degradation
AF2641_RS11050	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AF2641_RS11050	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AF2641_RS11050	PWY-7007	methyl ketone biosynthesis
AF2641_RS11050	PWY-7046	4-coumarate degradation (anaerobic)
AF2641_RS11050	PWY-7094	fatty acid salvage
AF2641_RS11050	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AF2641_RS11050	PWY-735	jasmonic acid biosynthesis
AF2641_RS11050	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AF2641_RS11050	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AF2641_RS11050	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AF2641_RS11050	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AF2641_RS11050	PWY-7726	AF2641_RS11050
AF2641_RS11050	PWY-7778	AF2641_RS11050
AF2641_RS11050	PWY-7779	AF2641_RS11050
AF2641_RS11050	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AF2641_RS11085	PWY-2781	<i>cis</i>-zeatin biosynthesis
AF2641_RS11120	PWY-5392	reductive TCA cycle II
AF2641_RS11120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS11125	PWY-7533	gliotoxin biosynthesis
AF2641_RS11155	PWY-5269	cardiolipin biosynthesis II
AF2641_RS11155	PWY-5668	cardiolipin biosynthesis I
AF2641_RS11155	PWY-7817	AF2641_RS11155
AF2641_RS11190	PWY-6936	seleno-amino acid biosynthesis
AF2641_RS11195	PWY-5350	thiosulfate disproportionation III (rhodanese)
AF2641_RS11215	PWY-7039	phosphatidate metabolism, as a signaling molecule
AF2641_RS11215	PWY-7817	AF2641_RS11215
AF2641_RS11245	PWY-6349	CDP-archaeol biosynthesis
AF2641_RS11245	PWY-7294	xylose degradation IV
AF2641_RS11245	PWY-7295	L-arabinose degradation IV
AF2641_RS11300	PWY-6531	mannitol cycle
AF2641_RS11315	PWY-5723	Rubisco shunt
AF2641_RS11335	PWY-6728	methylaspartate cycle
AF2641_RS11335	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS11335	PWY-7118	chitin degradation to ethanol
AF2641_RS11335	PWY-7294	xylose degradation IV
AF2641_RS11335	PWY-7295	L-arabinose degradation IV
AF2641_RS11335	PWY-7854	AF2641_RS11335
AF2641_RS11400	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AF2641_RS11400	PWY-2161	folate polyglutamylation
AF2641_RS11400	PWY-2201	folate transformations I
AF2641_RS11400	PWY-3841	folate transformations II
AF2641_RS11430	PWY-6683	sulfate reduction III (assimilatory)
AF2641_RS11435	PWY-6683	sulfate reduction III (assimilatory)
AF2641_RS11575	PWY-7254	TCA cycle VII (acetate-producers)
AF2641_RS11635	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AF2641_RS11635	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AF2641_RS11640	PWY-6853	ethylene biosynthesis II (microbes)
AF2641_RS11695	PWY-2941	L-lysine biosynthesis II
AF2641_RS11695	PWY-2942	L-lysine biosynthesis III
AF2641_RS11695	PWY-5097	L-lysine biosynthesis VI
AF2641_RS11700	PWY-2941	L-lysine biosynthesis II
AF2641_RS11700	PWY-2942	L-lysine biosynthesis III
AF2641_RS11700	PWY-5097	L-lysine biosynthesis VI
AF2641_RS11700	PWY-6559	spermidine biosynthesis II
AF2641_RS11700	PWY-6562	norspermidine biosynthesis
AF2641_RS11700	PWY-7153	grixazone biosynthesis
AF2641_RS11705	PWY-2941	L-lysine biosynthesis II
AF2641_RS11705	PWY-2942	L-lysine biosynthesis III
AF2641_RS11705	PWY-5097	L-lysine biosynthesis VI
AF2641_RS11705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS11705	PWY-6559	spermidine biosynthesis II
AF2641_RS11705	PWY-6562	norspermidine biosynthesis
AF2641_RS11705	PWY-7153	grixazone biosynthesis
AF2641_RS11705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS11715	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AF2641_RS11745	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AF2641_RS11745	PWY-6167	flavin biosynthesis II (archaea)
AF2641_RS11745	PWY-6168	flavin biosynthesis III (fungi)
AF2641_RS11745	PWY-7863	AF2641_RS11745
AF2641_RS11805	PWY-7294	xylose degradation IV
AF2641_RS11805	PWY-7295	L-arabinose degradation IV
AF2641_RS11805	PWY-7560	methylerythritol phosphate pathway II
AF2641_RS11810	PWY-5667	CDP-diacylglycerol biosynthesis I
AF2641_RS11810	PWY-5981	CDP-diacylglycerol biosynthesis III
AF2641_RS11810	PWY-7817	AF2641_RS11810
AF2641_RS11980	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS12050	PWY-5392	reductive TCA cycle II
AF2641_RS12050	PWY-5537	pyruvate fermentation to acetate V
AF2641_RS12050	PWY-5538	pyruvate fermentation to acetate VI
AF2641_RS12050	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS12050	PWY-5913	TCA cycle VI (obligate autotrophs)
AF2641_RS12050	PWY-6728	methylaspartate cycle
AF2641_RS12050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS12050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AF2641_RS12055	PWY-5392	reductive TCA cycle II
AF2641_RS12055	PWY-5537	pyruvate fermentation to acetate V
AF2641_RS12055	PWY-5538	pyruvate fermentation to acetate VI
AF2641_RS12055	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS12055	PWY-5913	TCA cycle VI (obligate autotrophs)
AF2641_RS12055	PWY-6728	methylaspartate cycle
AF2641_RS12055	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS12055	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AF2641_RS12090	PWY-6829	tRNA methylation (yeast)
AF2641_RS12090	PWY-7285	methylwyosine biosynthesis
AF2641_RS12090	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AF2641_RS12145	PWY-5367	petroselinate biosynthesis
AF2641_RS12145	PWY-5515	L-arabinose degradation II
AF2641_RS12145	PWY-5525	D-glucuronate degradation I
AF2641_RS12145	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AF2641_RS12145	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AF2641_RS12145	PWY-5989	stearate biosynthesis II (bacteria and plants)
AF2641_RS12145	PWY-5994	palmitate biosynthesis I (animals and fungi)
AF2641_RS12145	PWY-6113	superpathway of mycolate biosynthesis
AF2641_RS12145	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AF2641_RS12145	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AF2641_RS12145	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS12145	PWY-7663	gondoate biosynthesis (anaerobic)
AF2641_RS12145	PWY-7664	oleate biosynthesis IV (anaerobic)
AF2641_RS12145	PWY-7858	AF2641_RS12145
AF2641_RS12145	PWYG-321	mycolate biosynthesis
AF2641_RS12150	PWY-4381	fatty acid biosynthesis initiation I
AF2641_RS12150	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AF2641_RS12150	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AF2641_RS12200	PWY-6898	thiamin salvage III
AF2641_RS12200	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AF2641_RS12200	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AF2641_RS12200	PWY-7356	thiamin salvage IV (yeast)
AF2641_RS12205	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AF2641_RS12205	PWY-5723	Rubisco shunt
AF2641_RS12225	PWY-2201	folate transformations I
AF2641_RS12230	PWY-6825	phosphatidylcholine biosynthesis V
AF2641_RS12250	PWY-7851	AF2641_RS12250
AF2641_RS12260	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AF2641_RS12325	PWY-5686	UMP biosynthesis
AF2641_RS12325	PWY-7790	AF2641_RS12325
AF2641_RS12325	PWY-7791	AF2641_RS12325
AF2641_RS12330	PWY-5686	UMP biosynthesis
AF2641_RS12330	PWY-7790	AF2641_RS12330
AF2641_RS12330	PWY-7791	AF2641_RS12330
AF2641_RS12345	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS12345	PWY-5686	UMP biosynthesis
AF2641_RS12345	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS12345	PWY-7790	AF2641_RS12345
AF2641_RS12345	PWY-7791	AF2641_RS12345
AF2641_RS12350	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS12350	PWY-5686	UMP biosynthesis
AF2641_RS12350	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS12350	PWY-7790	AF2641_RS12350
AF2641_RS12350	PWY-7791	AF2641_RS12350
AF2641_RS12355	PWY-5686	UMP biosynthesis
AF2641_RS12355	PWY-7790	AF2641_RS12355
AF2641_RS12355	PWY-7791	AF2641_RS12355
AF2641_RS12360	PWY-5686	UMP biosynthesis
AF2641_RS12360	PWY-7790	AF2641_RS12360
AF2641_RS12360	PWY-7791	AF2641_RS12360
AF2641_RS12370	PWY-7183	pyrimidine nucleobases salvage I
AF2641_RS12415	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AF2641_RS12475	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS12475	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS12480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AF2641_RS12480	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AF2641_RS12480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AF2641_RS12480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AF2641_RS12490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AF2641_RS12490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AF2641_RS12495	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AF2641_RS12495	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AF2641_RS12495	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AF2641_RS12520	PWY-2201	folate transformations I
AF2641_RS12535	PWY-6654	phosphopantothenate biosynthesis III
AF2641_RS12535	PWY-7862	AF2641_RS12535
AF2641_RS12580	PWY-7851	AF2641_RS12580
AF2641_RS12660	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS12660	PWY-4521	arsenite oxidation I (respiratory)
AF2641_RS12660	PWY-6692	Fe(II) oxidation
AF2641_RS12660	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS12670	PWY-3781	aerobic respiration I (cytochrome c)
AF2641_RS12670	PWY-4521	arsenite oxidation I (respiratory)
AF2641_RS12670	PWY-6692	Fe(II) oxidation
AF2641_RS12670	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AF2641_RS12690	PWY-5750	itaconate biosynthesis
AF2641_RS12690	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AF2641_RS12690	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AF2641_RS12720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AF2641_RS12720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AF2641_RS12765	PWY-723	alkylnitronates degradation
AF2641_RS12795	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AF2641_RS12795	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AF2641_RS12850	PWY-2941	L-lysine biosynthesis II
AF2641_RS12855	PWY-2941	L-lysine biosynthesis II
AF2641_RS13185	PWY-6703	preQ<sub>0</sub> biosynthesis
AF2641_RS13195	PWY-6703	preQ<sub>0</sub> biosynthesis
AF2641_RS13295	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS13295	PWY-5389	3-methylthiopropanoate biosynthesis
AF2641_RS13300	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS13300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AF2641_RS13300	PWY-6416	quinate degradation II
AF2641_RS13300	PWY-6707	gallate biosynthesis
AF2641_RS13305	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS13310	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS13310	PWY-5532	adenosine nucleotides degradation IV
AF2641_RS13310	PWY-5723	Rubisco shunt
AF2641_RS13325	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
AF2641_RS13330	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AF2641_RS13330	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AF2641_RS13440	PWY-2721	trehalose degradation III
AF2641_RS13440	PWY-2722	trehalose degradation IV
AF2641_RS13440	PWY-7459	kojibiose degradation
AF2641_RS13545	PWY-4261	glycerol degradation I
AF2641_RS13555	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AF2641_RS13570	PWY-5392	reductive TCA cycle II
AF2641_RS13570	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AF2641_RS13570	PWY-5690	TCA cycle II (plants and fungi)
AF2641_RS13570	PWY-5913	TCA cycle VI (obligate autotrophs)
AF2641_RS13570	PWY-6728	methylaspartate cycle
AF2641_RS13570	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AF2641_RS13570	PWY-7254	TCA cycle VII (acetate-producers)
AF2641_RS13570	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AF2641_RS13645	PWY-6938	NADH repair
AF2641_RS14085	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AF2641_RS14085	PWY-7820	AF2641_RS14085
AF2641_RS14115	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AF2641_RS14115	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AF2641_RS14115	PWY-5989	stearate biosynthesis II (bacteria and plants)
AF2641_RS14115	PWY-6113	superpathway of mycolate biosynthesis
AF2641_RS14115	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AF2641_RS14115	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AF2641_RS14115	PWY-7663	gondoate biosynthesis (anaerobic)
AF2641_RS14115	PWY-7664	oleate biosynthesis IV (anaerobic)
AF2641_RS14115	PWY-7858	AF2641_RS14115
AF2641_RS14115	PWYG-321	mycolate biosynthesis
AF2641_RS14150	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AF2641_RS14150	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AF2641_RS14150	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AF2641_RS14275	PWY-4381	fatty acid biosynthesis initiation I
AF2641_RS14305	PWY-4981	L-proline biosynthesis II (from arginine)
AF2641_RS14305	PWY-4984	urea cycle
AF2641_RS14305	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS14310	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS14310	PWY-5686	UMP biosynthesis
AF2641_RS14310	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS14310	PWY-7790	AF2641_RS14310
AF2641_RS14310	PWY-7791	AF2641_RS14310
AF2641_RS14315	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS14315	PWY-5686	UMP biosynthesis
AF2641_RS14315	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS14315	PWY-7790	AF2641_RS14315
AF2641_RS14315	PWY-7791	AF2641_RS14315
AF2641_RS14325	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS14325	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS14330	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS14335	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AF2641_RS14335	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AF2641_RS14395	PWY-2201	folate transformations I
AF2641_RS14395	PWY-3841	folate transformations II
AF2641_RS14400	PWY-2201	folate transformations I
AF2641_RS14400	PWY-3841	folate transformations II
AF2641_RS14505	PWY-3341	L-proline biosynthesis III
AF2641_RS14505	PWY-4981	L-proline biosynthesis II (from arginine)
AF2641_RS14505	PWY-6344	L-ornithine degradation II (Stickland reaction)
AF2641_RS14505	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AF2641_RS14600	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
