AFK25_RS00005 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AFK25_RS00010 SM00480 DNA polymerase III beta subunit AFK25_RS00025 SM00387 Histidine kinase-like ATPases AFK25_RS00025 SM00433 TopoisomeraseII AFK25_RS00030 SM00434 DNA Topoisomerase IV AFK25_RS00035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS00070 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS00070 SM01240 AFK25_RS00070 AFK25_RS00075 SM00936 Penicillin-binding protein 5, C-terminal domain AFK25_RS00120 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00130 SM00493 AFK25_RS00130 AFK25_RS00210 SM00966 SpoVT / AbrB like domain AFK25_RS00225 SM01208 AFK25_RS00225 AFK25_RS00230 SM00493 AFK25_RS00230 AFK25_RS00235 SM00650 Ribosomal RNA adenine dimethylases AFK25_RS00275 SM01400 AFK25_RS00275 AFK25_RS00295 SM00487 DEAD-like helicases superfamily AFK25_RS00295 SM00490 helicase superfamily c-terminal domain AFK25_RS00295 SM00982 AFK25_RS00295 AFK25_RS00295 SM01058 CarD-like/TRCF domain AFK25_RS00300 SM00966 SpoVT / AbrB like domain AFK25_RS00315 SM00363 S4 RNA-binding domain AFK25_RS00335 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS00350 SM00331 Sigma factor PP2C-like phosphatases AFK25_RS00350 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AFK25_RS00360 SM00220 Serine/Threonine protein kinases, catalytic domain AFK25_RS00365 SM00977 TilS substrate C-terminal domain AFK25_RS00375 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00415 SM00905 Dihydroneopterin aldolase AFK25_RS00465 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00465 SM01086 C-terminal, D2-small domain, of ClpB protein AFK25_RS00470 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00475 SM00670 Large family of predicted nucleotide-binding domains AFK25_RS00500 SM00840 AFK25_RS00500 AFK25_RS00505 SM00535 Ribonuclease III family AFK25_RS00510 SM00967 RNA 2'-O ribose methyltransferase substrate binding AFK25_RS00535 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AFK25_RS00535 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AFK25_RS00540 SM00649 Ribosomal protein L11/L12 AFK25_RS00570 SM00663 RNA polymerase I subunit A N-terminus AFK25_RS00590 SM00838 Elongation factor G C-terminus AFK25_RS00590 SM00889 Elongation factor G, domain IV AFK25_RS00600 SM01403 AFK25_RS00600 AFK25_RS00620 SM01382 AFK25_RS00620 AFK25_RS00620 SM01383 AFK25_RS00620 AFK25_RS00635 SM00322 K homology RNA-binding domain AFK25_RS00655 SM01374 AFK25_RS00655 AFK25_RS00660 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AFK25_RS00720 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS00740 SM00662 RNA polymerases D AFK25_RS00750 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00755 SM00382 ATPases associated with a variety of cellular activities AFK25_RS00785 SM00646 AFK25_RS00785 AFK25_RS00800 SM01251 AFK25_RS00800 AFK25_RS00935 SM00342 helix_turn_helix, arabinose operon control protein AFK25_RS00955 SM00387 Histidine kinase-like ATPases AFK25_RS00960 SM00421 helix_turn_helix, Lux Regulon AFK25_RS00960 SM00448 cheY-homologous receiver domain AFK25_RS00975 SM00422 helix_turn_helix, mercury resistance AFK25_RS01015 SM00878 Biotin carboxylase C-terminal domain AFK25_RS01080 SM00487 DEAD-like helicases superfamily AFK25_RS01080 SM00490 helicase superfamily c-terminal domain AFK25_RS01095 SM01005 Alanine racemase, C-terminal domain AFK25_RS01110 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS01110 SM00732 Likely ribonuclease with RNase H fold. AFK25_RS01115 SM00731 SprT homologues. AFK25_RS01220 SM00382 ATPases associated with a variety of cellular activities AFK25_RS01225 SM00881 CoA binding domain AFK25_RS01235 SM00883 Chaperonin 10 Kd subunit AFK25_RS01280 SM01001 AIR carboxylase AFK25_RS01290 SM00998 Adenylosuccinate lyase C-terminus AFK25_RS01305 SM01211 AFK25_RS01305 AFK25_RS01330 SM00798 AICARFT/IMPCHase bienzyme AFK25_RS01330 SM00851 MGS-like domain AFK25_RS01335 SM01209 AFK25_RS01335 AFK25_RS01335 SM01210 AFK25_RS01335 AFK25_RS01370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFK25_RS01370 SM00292 breast cancer carboxy-terminal domain AFK25_RS01370 SM00532 Ligase N family AFK25_RS01410 SM00845 GatB domain AFK25_RS01420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS01420 SM00419 helix_turn_helix, cAMP Regulatory protein AFK25_RS01450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS01470 SM00387 Histidine kinase-like ATPases AFK25_RS01470 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS01475 SM00448 cheY-homologous receiver domain AFK25_RS01475 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS01495 SM00046 Diacylglycerol kinase catalytic domain (presumed) AFK25_RS01505 SM00857 Resolvase, N terminal domain AFK25_RS01515 SM00857 Resolvase, N terminal domain AFK25_RS01535 SM00382 ATPases associated with a variety of cellular activities AFK25_RS01540 SM00857 Resolvase, N terminal domain AFK25_RS01570 SM00382 ATPases associated with a variety of cellular activities AFK25_RS01575 SM00448 cheY-homologous receiver domain AFK25_RS01575 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS01580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS01580 SM00387 Histidine kinase-like ATPases AFK25_RS01580 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS01610 SM00382 ATPases associated with a variety of cellular activities AFK25_RS01620 SM00448 cheY-homologous receiver domain AFK25_RS01620 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS01625 SM00387 Histidine kinase-like ATPases AFK25_RS01625 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS01650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS01655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS01660 SM00052 Putative diguanylate phosphodiesterase AFK25_RS01660 SM00267 diguanylate cyclase AFK25_RS01675 SM00450 Rhodanese Homology Domain AFK25_RS01685 SM00899 AFK25_RS01685 AFK25_RS01755 SM00226 Low molecular weight phosphatase family AFK25_RS01810 SM00478 endonuclease III AFK25_RS01825 SM00487 DEAD-like helicases superfamily AFK25_RS01825 SM00490 helicase superfamily c-terminal domain AFK25_RS01835 SM00100 Cyclic nucleotide-monophosphate binding domain AFK25_RS01835 SM00419 helix_turn_helix, cAMP Regulatory protein AFK25_RS01845 SM00829 Enoylreductase AFK25_RS01850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS01850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS01880 SM00822 AFK25_RS01880 AFK25_RS01905 SM00478 endonuclease III AFK25_RS01925 SM00382 ATPases associated with a variety of cellular activities AFK25_RS01930 SM00382 ATPases associated with a variety of cellular activities AFK25_RS01965 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02140 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02170 SM00347 helix_turn_helix multiple antibiotic resistance protein AFK25_RS02190 SM00873 B3/4 domain AFK25_RS02195 SM00567 E-Z type HEAT repeats AFK25_RS02210 SM00763 PrkA AAA domain AFK25_RS02220 SM00857 Resolvase, N terminal domain AFK25_RS02250 SM00530 Helix-turn-helix XRE-family like proteins AFK25_RS02255 SM00530 Helix-turn-helix XRE-family like proteins AFK25_RS02330 SM01040 BRO family, N-terminal domain AFK25_RS02500 SM00257 Lysin motif AFK25_RS02500 SM00644 AFK25_RS02500 AFK25_RS02520 SM00530 Helix-turn-helix XRE-family like proteins AFK25_RS02535 SM00450 Rhodanese Homology Domain AFK25_RS02540 SM00450 Rhodanese Homology Domain AFK25_RS02565 SM00450 Rhodanese Homology Domain AFK25_RS02565 SM00849 Metallo-beta-lactamase superfamily AFK25_RS02575 SM01091 Transporter associated domain AFK25_RS02600 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS02625 SM00244 prohibitin homologues AFK25_RS02630 SM00244 prohibitin homologues AFK25_RS02640 SM00347 helix_turn_helix multiple antibiotic resistance protein AFK25_RS02640 SM00529 Helix-turn-helix diphteria tox regulatory element AFK25_RS02650 SM00642 Alpha-amylase domain AFK25_RS02660 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AFK25_RS02675 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02715 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS02715 SM01091 Transporter associated domain AFK25_RS02720 SM00062 Bacterial periplasmic substrate-binding proteins AFK25_RS02720 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AFK25_RS02730 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02745 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02775 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS02805 SM00347 helix_turn_helix multiple antibiotic resistance protein AFK25_RS02835 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02850 SM00450 Rhodanese Homology Domain AFK25_RS02885 SM00354 helix_turn _helix lactose operon repressor AFK25_RS02905 SM00642 Alpha-amylase domain AFK25_RS02910 SM00849 Metallo-beta-lactamase superfamily AFK25_RS02930 SM00100 Cyclic nucleotide-monophosphate binding domain AFK25_RS02930 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS02935 SM00479 AFK25_RS02935 AFK25_RS02965 SM00382 ATPases associated with a variety of cellular activities AFK25_RS02970 SM00052 Putative diguanylate phosphodiesterase AFK25_RS02970 SM00091 PAS domain AFK25_RS02970 SM00267 diguanylate cyclase AFK25_RS02975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS02980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS02985 SM00052 Putative diguanylate phosphodiesterase AFK25_RS03105 SM00052 Putative diguanylate phosphodiesterase AFK25_RS03105 SM00091 PAS domain AFK25_RS03105 SM00267 diguanylate cyclase AFK25_RS03140 SM00563 Phosphate acyltransferases AFK25_RS03160 SM00342 helix_turn_helix, arabinose operon control protein AFK25_RS03165 SM00642 Alpha-amylase domain AFK25_RS03185 SM00642 Alpha-amylase domain AFK25_RS03195 SM00354 helix_turn _helix lactose operon repressor AFK25_RS03220 SM00382 ATPases associated with a variety of cellular activities AFK25_RS03295 SM01018 B12 binding domain AFK25_RS03315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS03315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS03345 SM00100 Cyclic nucleotide-monophosphate binding domain AFK25_RS03345 SM00419 helix_turn_helix, cAMP Regulatory protein AFK25_RS03350 SM00859 Semialdehyde dehydrogenase, NAD binding domain AFK25_RS03370 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AFK25_RS03375 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFK25_RS03390 SM00382 ATPases associated with a variety of cellular activities AFK25_RS03390 SM01086 C-terminal, D2-small domain, of ClpB protein AFK25_RS03415 SM00825 Beta-ketoacyl synthase AFK25_RS03460 SM00382 ATPases associated with a variety of cellular activities AFK25_RS03465 SM00382 ATPases associated with a variety of cellular activities AFK25_RS03480 SM00155 Phospholipase D. Active site motifs. AFK25_RS03515 SM01118 AFK25_RS03515 AFK25_RS03525 SM00954 Region found in RelA / SpoT proteins AFK25_RS03560 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS03560 SM00924 MgtE intracellular N domain AFK25_RS03585 SM00984 UDP binding domain AFK25_RS03690 SM01321 AFK25_RS03690 AFK25_RS03750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS03885 SM01126 AFK25_RS03885 AFK25_RS03920 SM00487 DEAD-like helicases superfamily AFK25_RS03940 SM00422 helix_turn_helix, mercury resistance AFK25_RS04015 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04020 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS04040 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04045 SM00567 E-Z type HEAT repeats AFK25_RS04045 SM00932 Scaffold protein Nfu/NifU N terminal AFK25_RS04055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS04080 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04080 SM00930 AFK25_RS04080 AFK25_RS04105 SM00822 AFK25_RS04105 AFK25_RS04115 SM00091 PAS domain AFK25_RS04115 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04125 SM00966 SpoVT / AbrB like domain AFK25_RS04150 SM00219 Tyrosine kinase, catalytic domain AFK25_RS04155 SM00530 Helix-turn-helix XRE-family like proteins AFK25_RS04160 SM00870 AFK25_RS04160 AFK25_RS04170 SM00919 Malic enzyme, NAD binding domain AFK25_RS04170 SM01274 AFK25_RS04170 AFK25_RS04175 SM00387 Histidine kinase-like ATPases AFK25_RS04175 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04215 SM00387 Histidine kinase-like ATPases AFK25_RS04215 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS04255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS04260 SM00354 helix_turn _helix lactose operon repressor AFK25_RS04305 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS04315 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFK25_RS04315 SM00895 AFK25_RS04315 AFK25_RS04335 SM00091 PAS domain AFK25_RS04335 SM00387 Histidine kinase-like ATPases AFK25_RS04335 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS04350 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04390 SM01007 Class II Aldolase and Adducin N-terminal domain AFK25_RS04410 SM00387 Histidine kinase-like ATPases AFK25_RS04410 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04425 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04440 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04440 SM01086 C-terminal, D2-small domain, of ClpB protein AFK25_RS04445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AFK25_RS04445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS04450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS04450 SM00387 Histidine kinase-like ATPases AFK25_RS04450 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04455 SM00448 cheY-homologous receiver domain AFK25_RS04455 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS04480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS04540 SM00387 Histidine kinase-like ATPases AFK25_RS04540 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS04610 SM00257 Lysin motif AFK25_RS04620 SM01061 CAT RNA binding domain AFK25_RS04645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS04645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS04665 SM00914 AFK25_RS04665 AFK25_RS04675 SM00387 Histidine kinase-like ATPases AFK25_RS04675 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04690 SM00260 Two component signalling adaptor domain AFK25_RS04690 SM00448 cheY-homologous receiver domain AFK25_RS04695 SM00267 diguanylate cyclase AFK25_RS04695 SM00448 cheY-homologous receiver domain AFK25_RS04715 SM00448 cheY-homologous receiver domain AFK25_RS04720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AFK25_RS04720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS04720 SM00387 Histidine kinase-like ATPases AFK25_RS04720 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS04720 SM00448 cheY-homologous receiver domain AFK25_RS04740 SM00052 Putative diguanylate phosphodiesterase AFK25_RS04740 SM00267 diguanylate cyclase AFK25_RS04780 SM00052 Putative diguanylate phosphodiesterase AFK25_RS04820 SM00849 Metallo-beta-lactamase superfamily AFK25_RS04845 SM00861 Transketolase, pyrimidine binding domain AFK25_RS04900 SM00382 ATPases associated with a variety of cellular activities AFK25_RS04925 SM00838 Elongation factor G C-terminus AFK25_RS04960 SM00670 Large family of predicted nucleotide-binding domains AFK25_RS04980 SM00878 Biotin carboxylase C-terminal domain AFK25_RS05055 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS05120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFK25_RS05175 SM00740 AFK25_RS05175 AFK25_RS05180 SM00740 AFK25_RS05180 AFK25_RS05235 SM00842 Cell division protein FtsA AFK25_RS05240 SM00864 Tubulin/FtsZ family, GTPase domain AFK25_RS05240 SM00865 Tubulin/FtsZ family, C-terminal domain AFK25_RS05285 SM00363 S4 RNA-binding domain AFK25_RS05305 SM00363 S4 RNA-binding domain AFK25_RS05330 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AFK25_RS05335 SM00851 MGS-like domain AFK25_RS05335 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AFK25_RS05350 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AFK25_RS05370 SM00831 Cation transporter/ATPase, N-terminus AFK25_RS05380 SM00072 Guanylate kinase homologues. AFK25_RS05385 SM01409 AFK25_RS05385 AFK25_RS05395 SM00487 DEAD-like helicases superfamily AFK25_RS05395 SM00490 helicase superfamily c-terminal domain AFK25_RS05420 SM00331 Sigma factor PP2C-like phosphatases AFK25_RS05420 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AFK25_RS05425 SM00220 Serine/Threonine protein kinases, catalytic domain AFK25_RS05425 SM00740 AFK25_RS05425 AFK25_RS05440 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AFK25_RS05460 SM01120 AFK25_RS05460 AFK25_RS05460 SM01121 AFK25_RS05460 AFK25_RS05475 SM00487 DEAD-like helicases superfamily AFK25_RS05475 SM00490 helicase superfamily c-terminal domain AFK25_RS05490 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AFK25_RS05495 SM00822 AFK25_RS05495 AFK25_RS05505 SM00358 Double-stranded RNA binding motif AFK25_RS05505 SM00535 Ribonuclease III family AFK25_RS05510 SM00968 SMC proteins Flexible Hinge Domain AFK25_RS05515 SM00382 ATPases associated with a variety of cellular activities AFK25_RS05515 SM00962 SRP54-type protein, GTPase domain AFK25_RS05515 SM00963 SRP54-type protein, helical bundle domain AFK25_RS05525 SM00382 ATPases associated with a variety of cellular activities AFK25_RS05525 SM00962 SRP54-type protein, GTPase domain AFK25_RS05525 SM00963 SRP54-type protein, helical bundle domain AFK25_RS05590 SM00881 CoA binding domain AFK25_RS05600 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AFK25_RS05600 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AFK25_RS05600 SM00493 AFK25_RS05600 AFK25_RS05620 SM00382 ATPases associated with a variety of cellular activities AFK25_RS05620 SM01086 C-terminal, D2-small domain, of ClpB protein AFK25_RS05660 SM00382 ATPases associated with a variety of cellular activities AFK25_RS05710 SM00448 cheY-homologous receiver domain AFK25_RS05745 SM00382 ATPases associated with a variety of cellular activities AFK25_RS05745 SM00962 SRP54-type protein, GTPase domain AFK25_RS05755 SM00448 cheY-homologous receiver domain AFK25_RS05760 SM00073 Histidine Phosphotransfer domain AFK25_RS05760 SM00260 Two component signalling adaptor domain AFK25_RS05760 SM00387 Histidine kinase-like ATPases AFK25_RS05760 SM01231 AFK25_RS05760 AFK25_RS05765 SM00260 Two component signalling adaptor domain AFK25_RS05835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFK25_RS05845 SM00479 AFK25_RS05845 AFK25_RS05845 SM00481 DNA polymerase alpha chain like domain AFK25_RS05855 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS05855 SM00322 K homology RNA-binding domain AFK25_RS05890 SM00904 Riboflavin kinase AFK25_RS05895 SM01387 AFK25_RS05895 AFK25_RS05900 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS05900 SM00322 K homology RNA-binding domain AFK25_RS05920 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AFK25_RS05930 SM00859 Semialdehyde dehydrogenase, NAD binding domain AFK25_RS05940 SM01130 AFK25_RS05940 AFK25_RS05945 SM00849 Metallo-beta-lactamase superfamily AFK25_RS05960 SM00382 ATPases associated with a variety of cellular activities AFK25_RS05960 SM00843 AFK25_RS05960 AFK25_RS05965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFK25_RS05965 SM00866 AFK25_RS05965 AFK25_RS05975 SM00382 ATPases associated with a variety of cellular activities AFK25_RS06015 SM00854 Bacterial capsule synthesis protein PGA_cap AFK25_RS06045 SM00347 helix_turn_helix multiple antibiotic resistance protein AFK25_RS06055 SM00487 DEAD-like helicases superfamily AFK25_RS06055 SM00490 helicase superfamily c-terminal domain AFK25_RS06105 SM00950 AFK25_RS06105 AFK25_RS06130 SM00346 helix_turn_helix isocitrate lyase regulation AFK25_RS06135 SM00796 Allophanate hydrolase subunit 1 AFK25_RS06140 SM00797 Allophanate hydrolase subunit 2 AFK25_RS06155 SM01321 AFK25_RS06155 AFK25_RS06165 SM00567 E-Z type HEAT repeats AFK25_RS06165 SM00932 Scaffold protein Nfu/NifU N terminal AFK25_RS06180 SM00382 ATPases associated with a variety of cellular activities AFK25_RS06225 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFK25_RS06255 SM00966 SpoVT / AbrB like domain AFK25_RS06350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS06390 SM00354 helix_turn _helix lactose operon repressor AFK25_RS06405 SM00347 helix_turn_helix multiple antibiotic resistance protein AFK25_RS06415 SM00257 Lysin motif AFK25_RS06420 SM00382 ATPases associated with a variety of cellular activities AFK25_RS06440 SM00346 helix_turn_helix isocitrate lyase regulation AFK25_RS06480 SM00387 Histidine kinase-like ATPases AFK25_RS06480 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS06485 SM00448 cheY-homologous receiver domain AFK25_RS06490 SM00387 Histidine kinase-like ATPases AFK25_RS06505 SM00062 Bacterial periplasmic substrate-binding proteins AFK25_RS06505 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AFK25_RS06510 SM00382 ATPases associated with a variety of cellular activities AFK25_RS06540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS06625 SM00045 Diacylglycerol kinase accessory domain (presumed) AFK25_RS06625 SM00046 Diacylglycerol kinase catalytic domain (presumed) AFK25_RS06640 SM00422 helix_turn_helix, mercury resistance AFK25_RS06655 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AFK25_RS06655 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AFK25_RS06655 SM00493 AFK25_RS06655 AFK25_RS06660 SM00450 Rhodanese Homology Domain AFK25_RS06705 SM00852 Probable molybdopterin binding domain AFK25_RS06710 SM00382 ATPases associated with a variety of cellular activities AFK25_RS06715 SM00322 K homology RNA-binding domain AFK25_RS06715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS06750 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS06765 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AFK25_RS06765 SM00534 ATPase domain of DNA mismatch repair MUTS family AFK25_RS06770 SM00853 MutL C terminal dimerisation domain AFK25_RS06770 SM01340 AFK25_RS06770 AFK25_RS06785 SM00382 ATPases associated with a variety of cellular activities AFK25_RS06835 SM00422 helix_turn_helix, mercury resistance AFK25_RS06840 SM01230 AFK25_RS06840 AFK25_RS06850 SM00257 Lysin motif AFK25_RS06855 SM00857 Resolvase, N terminal domain AFK25_RS06865 SM00861 Transketolase, pyrimidine binding domain AFK25_RS06880 SM00448 cheY-homologous receiver domain AFK25_RS06950 SM00357 Cold shock protein domain AFK25_RS06980 SM00267 diguanylate cyclase AFK25_RS06980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS06985 SM00420 helix_turn_helix, Deoxyribose operon repressor AFK25_RS06985 SM01134 AFK25_RS06985 AFK25_RS07005 SM00387 Histidine kinase-like ATPases AFK25_RS07005 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS07015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS07015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS07185 SM01207 AFK25_RS07185 AFK25_RS07190 SM00881 CoA binding domain AFK25_RS07195 SM00387 Histidine kinase-like ATPases AFK25_RS07195 SM00433 TopoisomeraseII AFK25_RS07200 SM00434 DNA Topoisomerase IV AFK25_RS07215 SM00642 Alpha-amylase domain AFK25_RS07220 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFK25_RS07220 SM00866 AFK25_RS07220 AFK25_RS07255 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07260 SM00327 von Willebrand factor (vWF) type A domain AFK25_RS07285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AFK25_RS07285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AFK25_RS07285 SM00493 AFK25_RS07285 AFK25_RS07315 SM00100 Cyclic nucleotide-monophosphate binding domain AFK25_RS07315 SM00419 helix_turn_helix, cAMP Regulatory protein AFK25_RS07335 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07375 SM00422 helix_turn_helix, mercury resistance AFK25_RS07390 SM00487 DEAD-like helicases superfamily AFK25_RS07390 SM00490 helicase superfamily c-terminal domain AFK25_RS07405 SM00822 AFK25_RS07405 AFK25_RS07420 SM00226 Low molecular weight phosphatase family AFK25_RS07430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS07435 SM00833 Cobalamin synthesis protein cobW C-terminal domain AFK25_RS07450 SM00849 Metallo-beta-lactamase superfamily AFK25_RS07465 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07475 SM01230 AFK25_RS07475 AFK25_RS07480 SM00357 Cold shock protein domain AFK25_RS07500 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFK25_RS07540 SM00091 PAS domain AFK25_RS07540 SM00387 Histidine kinase-like ATPases AFK25_RS07540 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS07605 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS07605 SM00876 Biotin and Thiamin Synthesis associated domain AFK25_RS07700 SM00491 AFK25_RS07700 AFK25_RS07705 SM00981 AFK25_RS07705 AFK25_RS07710 SM00052 Putative diguanylate phosphodiesterase AFK25_RS07710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AFK25_RS07710 SM00091 PAS domain AFK25_RS07710 SM00267 diguanylate cyclase AFK25_RS07725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS07745 SM00331 Sigma factor PP2C-like phosphatases AFK25_RS07745 SM00448 cheY-homologous receiver domain AFK25_RS07770 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07785 SM00318 Staphylococcal nuclease homologues AFK25_RS07790 SM00855 Phosphoglycerate mutase family AFK25_RS07795 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07810 SM00710 Parallel beta-helix repeats AFK25_RS07810 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AFK25_RS07815 SM00052 Putative diguanylate phosphodiesterase AFK25_RS07815 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AFK25_RS07815 SM00091 PAS domain AFK25_RS07815 SM00267 diguanylate cyclase AFK25_RS07825 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS07830 SM00479 AFK25_RS07830 AFK25_RS07870 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07875 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07925 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AFK25_RS07935 SM00382 ATPases associated with a variety of cellular activities AFK25_RS07945 SM00342 helix_turn_helix, arabinose operon control protein AFK25_RS07945 SM00448 cheY-homologous receiver domain AFK25_RS07950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS07950 SM00387 Histidine kinase-like ATPases AFK25_RS07960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS07960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS07975 SM00450 Rhodanese Homology Domain AFK25_RS07980 SM00450 Rhodanese Homology Domain AFK25_RS08025 SM00382 ATPases associated with a variety of cellular activities AFK25_RS08085 SM00422 helix_turn_helix, mercury resistance AFK25_RS08095 SM01245 AFK25_RS08095 AFK25_RS08110 SM00382 ATPases associated with a variety of cellular activities AFK25_RS08120 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AFK25_RS08135 SM00382 ATPases associated with a variety of cellular activities AFK25_RS08165 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AFK25_RS08165 SM00475 5'-3' exonuclease AFK25_RS08245 SM00893 Electron transfer flavoprotein domain AFK25_RS08250 SM00893 Electron transfer flavoprotein domain AFK25_RS08320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS08330 SM00871 Bacterial transcription activator, effector binding domain AFK25_RS08405 SM00448 cheY-homologous receiver domain AFK25_RS08405 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS08410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS08410 SM00387 Histidine kinase-like ATPases AFK25_RS08410 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS08430 SM00640 Glycosyl hydrolases family 32 AFK25_RS08455 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS08460 SM01266 AFK25_RS08460 AFK25_RS08515 SM00028 Tetratricopeptide repeats AFK25_RS08535 SM00487 DEAD-like helicases superfamily AFK25_RS08535 SM00490 helicase superfamily c-terminal domain AFK25_RS08600 SM00382 ATPases associated with a variety of cellular activities AFK25_RS08605 SM00052 Putative diguanylate phosphodiesterase AFK25_RS08605 SM00267 diguanylate cyclase AFK25_RS08610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS08630 SM00267 diguanylate cyclase AFK25_RS08695 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFK25_RS08695 SM00478 endonuclease III AFK25_RS08695 SM00525 AFK25_RS08695 AFK25_RS08745 SM00479 AFK25_RS08745 AFK25_RS08745 SM00487 DEAD-like helicases superfamily AFK25_RS08745 SM00491 AFK25_RS08745 AFK25_RS08785 SM00851 MGS-like domain AFK25_RS08835 SM00914 AFK25_RS08835 AFK25_RS08840 SM00028 Tetratricopeptide repeats AFK25_RS08905 SM00138 Methyltransferase, chemotaxis proteins AFK25_RS08910 SM00562 AFK25_RS08910 AFK25_RS08940 SM00411 bacterial (prokaryotic) histone like domain AFK25_RS08985 SM01240 AFK25_RS08985 AFK25_RS08990 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS08995 SM00563 Phosphate acyltransferases AFK25_RS09045 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AFK25_RS09060 SM00422 helix_turn_helix, mercury resistance AFK25_RS09095 SM00257 Lysin motif AFK25_RS09105 SM00487 DEAD-like helicases superfamily AFK25_RS09105 SM00490 helicase superfamily c-terminal domain AFK25_RS09155 SM00855 Phosphoglycerate mutase family AFK25_RS09180 SM00382 ATPases associated with a variety of cellular activities AFK25_RS09195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS09195 SM00387 Histidine kinase-like ATPases AFK25_RS09195 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS09200 SM00448 cheY-homologous receiver domain AFK25_RS09200 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS09220 SM00363 S4 RNA-binding domain AFK25_RS09260 SM00422 helix_turn_helix, mercury resistance AFK25_RS09260 SM00857 Resolvase, N terminal domain AFK25_RS09265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS09390 SM00387 Histidine kinase-like ATPases AFK25_RS09400 SM00936 Penicillin-binding protein 5, C-terminal domain AFK25_RS09405 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AFK25_RS09475 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AFK25_RS09485 SM00100 Cyclic nucleotide-monophosphate binding domain AFK25_RS09485 SM00419 helix_turn_helix, cAMP Regulatory protein AFK25_RS09515 SM00852 Probable molybdopterin binding domain AFK25_RS09525 SM00852 Probable molybdopterin binding domain AFK25_RS09530 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS09535 SM00382 ATPases associated with a variety of cellular activities AFK25_RS09585 SM00382 ATPases associated with a variety of cellular activities AFK25_RS09615 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS09620 SM00704 CDGSH-type zinc finger. Function unknown. AFK25_RS09640 SM00849 Metallo-beta-lactamase superfamily AFK25_RS09675 SM01350 AFK25_RS09675 AFK25_RS09680 SM00260 Two component signalling adaptor domain AFK25_RS09730 SM00861 Transketolase, pyrimidine binding domain AFK25_RS09750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AFK25_RS09760 SM00091 PAS domain AFK25_RS09760 SM00382 ATPases associated with a variety of cellular activities AFK25_RS09775 SM00448 cheY-homologous receiver domain AFK25_RS09780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFK25_RS09795 SM00363 S4 RNA-binding domain AFK25_RS09800 SM00861 Transketolase, pyrimidine binding domain AFK25_RS09835 SM00878 Biotin carboxylase C-terminal domain AFK25_RS09880 SM00382 ATPases associated with a variety of cellular activities AFK25_RS09890 SM00841 Elongation factor P, C-terminal AFK25_RS09890 SM01185 AFK25_RS09890 AFK25_RS09925 SM00529 Helix-turn-helix diphteria tox regulatory element AFK25_RS09945 SM00450 Rhodanese Homology Domain AFK25_RS09965 SM00487 DEAD-like helicases superfamily AFK25_RS09965 SM00490 helicase superfamily c-terminal domain AFK25_RS10015 SM00382 ATPases associated with a variety of cellular activities AFK25_RS10025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AFK25_RS10040 SM00849 Metallo-beta-lactamase superfamily AFK25_RS10050 SM00631 AFK25_RS10050 AFK25_RS10080 SM00028 Tetratricopeptide repeats AFK25_RS10125 SM00382 ATPases associated with a variety of cellular activities AFK25_RS10170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS10170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS10205 SM00382 ATPases associated with a variety of cellular activities AFK25_RS10220 SM00518 AP endonuclease family 2 AFK25_RS10225 SM00487 DEAD-like helicases superfamily AFK25_RS10225 SM00490 helicase superfamily c-terminal domain AFK25_RS10265 SM00400 zinc finger AFK25_RS10265 SM00493 AFK25_RS10265 AFK25_RS10275 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS10340 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS10355 SM00271 DnaJ molecular chaperone homology domain AFK25_RS10375 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS10380 SM00838 Elongation factor G C-terminus AFK25_RS10405 SM00100 Cyclic nucleotide-monophosphate binding domain AFK25_RS10405 SM00419 helix_turn_helix, cAMP Regulatory protein AFK25_RS10420 SM00849 Metallo-beta-lactamase superfamily AFK25_RS10430 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFK25_RS10450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS10460 SM01103 AFK25_RS10460 AFK25_RS10535 SM00487 DEAD-like helicases superfamily AFK25_RS10535 SM00490 helicase superfamily c-terminal domain AFK25_RS10560 SM00382 ATPases associated with a variety of cellular activities AFK25_RS10575 SM00318 Staphylococcal nuclease homologues AFK25_RS10655 SM00732 Likely ribonuclease with RNase H fold. AFK25_RS10665 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AFK25_RS10685 SM00028 Tetratricopeptide repeats AFK25_RS10685 SM00671 Sel1-like repeats. AFK25_RS10705 SM00382 ATPases associated with a variety of cellular activities AFK25_RS10735 SM00287 Bacterial SH3 domain homologues AFK25_RS10735 SM00646 AFK25_RS10735 AFK25_RS10750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS10750 SM00954 Region found in RelA / SpoT proteins AFK25_RS10795 SM01323 AFK25_RS10795 AFK25_RS10815 SM00382 ATPases associated with a variety of cellular activities AFK25_RS10820 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AFK25_RS10850 SM00257 Lysin motif AFK25_RS10895 SM01317 AFK25_RS10895 AFK25_RS11000 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11005 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11010 SM01208 AFK25_RS11010 AFK25_RS11040 SM00248 ankyrin repeats AFK25_RS11045 SM00635 Bacterial Ig-like domain 2 AFK25_RS11070 SM00257 Lysin motif AFK25_RS11080 SM01004 Delta-aminolevulinic acid dehydratase AFK25_RS11115 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11115 SM00464 Found in ATP-dependent protease La (LON) AFK25_RS11120 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11125 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11125 SM00994 ClpX C4-type zinc finger AFK25_RS11125 SM01086 C-terminal, D2-small domain, of ClpB protein AFK25_RS11150 SM01329 AFK25_RS11150 AFK25_RS11155 SM00917 LeuA allosteric (dimerisation) domain AFK25_RS11200 SM00909 Sporulation and spore germination AFK25_RS11210 SM00421 helix_turn_helix, Lux Regulon AFK25_RS11240 SM00465 GIY-YIG type nucleases (URI domain) AFK25_RS11290 SM00893 Electron transfer flavoprotein domain AFK25_RS11295 SM00893 Electron transfer flavoprotein domain AFK25_RS11320 SM00463 Small MutS-related domain AFK25_RS11320 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AFK25_RS11320 SM00534 ATPase domain of DNA mismatch repair MUTS family AFK25_RS11325 SM00481 DNA polymerase alpha chain like domain AFK25_RS11325 SM00483 DNA polymerase X family AFK25_RS11345 SM00347 helix_turn_helix multiple antibiotic resistance protein AFK25_RS11350 SM00873 B3/4 domain AFK25_RS11350 SM00874 tRNA synthetase B5 domain AFK25_RS11350 SM00896 Ferredoxin-fold anticodon binding domain AFK25_RS11360 SM00967 RNA 2'-O ribose methyltransferase substrate binding AFK25_RS11410 SM00342 helix_turn_helix, arabinose operon control protein AFK25_RS11410 SM00448 cheY-homologous receiver domain AFK25_RS11415 SM00387 Histidine kinase-like ATPases AFK25_RS11440 SM00354 helix_turn _helix lactose operon repressor AFK25_RS11510 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AFK25_RS11520 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11545 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFK25_RS11560 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AFK25_RS11560 SM01232 AFK25_RS11560 AFK25_RS11565 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AFK25_RS11565 SM00474 3'-5' exonuclease AFK25_RS11565 SM00475 5'-3' exonuclease AFK25_RS11565 SM00482 DNA polymerase A domain AFK25_RS11570 SM00091 PAS domain AFK25_RS11570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS11570 SM00387 Histidine kinase-like ATPases AFK25_RS11570 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS11575 SM00448 cheY-homologous receiver domain AFK25_RS11575 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS11590 SM01329 AFK25_RS11590 AFK25_RS11635 SM00345 helix_turn_helix gluconate operon transcriptional repressor AFK25_RS11640 SM00919 Malic enzyme, NAD binding domain AFK25_RS11640 SM01274 AFK25_RS11640 AFK25_RS11645 SM00481 DNA polymerase alpha chain like domain AFK25_RS11670 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS11675 SM00849 Metallo-beta-lactamase superfamily AFK25_RS11745 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11770 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11785 SM00981 AFK25_RS11785 AFK25_RS11810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AFK25_RS11815 SM00267 diguanylate cyclase AFK25_RS11820 SM00363 S4 RNA-binding domain AFK25_RS11820 SM01390 AFK25_RS11820 AFK25_RS11825 SM00363 S4 RNA-binding domain AFK25_RS11845 SM00116 Domain in cystathionine beta-synthase and other proteins. AFK25_RS11855 SM00354 helix_turn _helix lactose operon repressor AFK25_RS11860 SM00830 Chorismate mutase type II AFK25_RS11865 SM00842 Cell division protein FtsA AFK25_RS11900 SM00382 ATPases associated with a variety of cellular activities AFK25_RS11900 SM00843 AFK25_RS11900 AFK25_RS11935 SM00849 Metallo-beta-lactamase superfamily AFK25_RS11955 SM00642 Alpha-amylase domain AFK25_RS11960 SM00052 Putative diguanylate phosphodiesterase AFK25_RS11995 SM00420 helix_turn_helix, Deoxyribose operon repressor AFK25_RS12000 SM00363 S4 RNA-binding domain AFK25_RS12020 SM00450 Rhodanese Homology Domain AFK25_RS12035 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS12065 SM00014 Acid phosphatase homologues AFK25_RS12105 SM00257 Lysin motif AFK25_RS12105 SM00644 AFK25_RS12105 AFK25_RS12105 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AFK25_RS12120 SM00382 ATPases associated with a variety of cellular activities AFK25_RS12140 SM00382 ATPases associated with a variety of cellular activities AFK25_RS12170 SM01234 AFK25_RS12170 AFK25_RS12175 SM00833 Cobalamin synthesis protein cobW C-terminal domain AFK25_RS12295 SM00642 Alpha-amylase domain AFK25_RS12440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS12480 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS12485 SM00530 Helix-turn-helix XRE-family like proteins AFK25_RS12495 SM00344 helix_turn_helix ASNC type AFK25_RS12660 SM00729 Elongator protein 3, MiaB family, Radical SAM AFK25_RS12720 SM00382 ATPases associated with a variety of cellular activities AFK25_RS12740 SM00382 ATPases associated with a variety of cellular activities AFK25_RS12740 SM00930 AFK25_RS12740 AFK25_RS12760 SM00493 AFK25_RS12760 AFK25_RS12825 SM00382 ATPases associated with a variety of cellular activities AFK25_RS12845 SM00316 Ribosomal protein S1-like RNA-binding domain AFK25_RS12845 SM00357 Cold shock protein domain AFK25_RS12845 SM00955 AFK25_RS12845 AFK25_RS12875 SM01192 AFK25_RS12875 AFK25_RS12875 SM01193 AFK25_RS12875 AFK25_RS12895 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AFK25_RS12955 SM00028 Tetratricopeptide repeats AFK25_RS13040 SM00382 ATPases associated with a variety of cellular activities AFK25_RS13045 SM00487 DEAD-like helicases superfamily AFK25_RS13045 SM00490 helicase superfamily c-terminal domain AFK25_RS13055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFK25_RS13065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFK25_RS13065 SM00245 tail specific protease AFK25_RS13080 SM00382 ATPases associated with a variety of cellular activities AFK25_RS13105 SM00937 AFK25_RS13105 AFK25_RS13110 SM00957 SecA DEAD-like domain AFK25_RS13110 SM00958 SecA preprotein cross-linking domain AFK25_RS13150 SM00858 AFK25_RS13150 AFK25_RS13265 SM00487 DEAD-like helicases superfamily AFK25_RS13265 SM00490 helicase superfamily c-terminal domain AFK25_RS13275 SM00421 helix_turn_helix, Lux Regulon AFK25_RS13275 SM00448 cheY-homologous receiver domain AFK25_RS13280 SM00387 Histidine kinase-like ATPases AFK25_RS13315 SM00287 Bacterial SH3 domain homologues AFK25_RS13315 SM00646 AFK25_RS13315 AFK25_RS13335 SM00060 Fibronectin type 3 domain AFK25_RS13335 SM00632 AFK25_RS13335 AFK25_RS13335 SM00642 Alpha-amylase domain AFK25_RS13335 SM01065 Starch binding domain AFK25_RS13355 SM00382 ATPases associated with a variety of cellular activities AFK25_RS13405 SM00387 Histidine kinase-like ATPases AFK25_RS13410 SM00421 helix_turn_helix, Lux Regulon AFK25_RS13410 SM00448 cheY-homologous receiver domain AFK25_RS13490 SM00957 SecA DEAD-like domain AFK25_RS13490 SM00958 SecA preprotein cross-linking domain AFK25_RS13505 SM00530 Helix-turn-helix XRE-family like proteins AFK25_RS13550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS13550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS13605 SM00487 DEAD-like helicases superfamily AFK25_RS13605 SM00490 helicase superfamily c-terminal domain AFK25_RS13625 SM00984 UDP binding domain AFK25_RS13645 SM00354 helix_turn _helix lactose operon repressor AFK25_RS13655 SM00382 ATPases associated with a variety of cellular activities AFK25_RS13810 SM00382 ATPases associated with a variety of cellular activities AFK25_RS13880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AFK25_RS13880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS13885 SM00226 Low molecular weight phosphatase family AFK25_RS13910 SM00937 AFK25_RS13910 AFK25_RS13925 SM00357 Cold shock protein domain AFK25_RS13925 SM00382 ATPases associated with a variety of cellular activities AFK25_RS13925 SM00959 Rho termination factor, N-terminal domain AFK25_RS13950 SM00448 cheY-homologous receiver domain AFK25_RS14005 SM00155 Phospholipase D. Active site motifs. AFK25_RS14010 SM00836 DALR anticodon binding domain AFK25_RS14010 SM01016 Arginyl tRNA synthetase N terminal dom AFK25_RS14060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AFK25_RS14125 SM00642 Alpha-amylase domain AFK25_RS14140 SM00986 Uracil DNA glycosylase superfamily AFK25_RS14140 SM00987 UreE urease accessory protein, C-terminal domain AFK25_RS14185 SM01133 AFK25_RS14185 AFK25_RS14200 SM00640 Glycosyl hydrolases family 32 AFK25_RS14215 SM01061 CAT RNA binding domain AFK25_RS14230 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AFK25_RS14230 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AFK25_RS14235 SM00382 ATPases associated with a variety of cellular activities AFK25_RS14245 SM00062 Bacterial periplasmic substrate-binding proteins AFK25_RS14245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AFK25_RS14290 SM00382 ATPases associated with a variety of cellular activities AFK25_RS14310 SM00382 ATPases associated with a variety of cellular activities AFK25_RS14340 SM00387 Histidine kinase-like ATPases AFK25_RS14345 SM00421 helix_turn_helix, Lux Regulon AFK25_RS14345 SM00448 cheY-homologous receiver domain AFK25_RS14350 SM00382 ATPases associated with a variety of cellular activities AFK25_RS14405 SM00382 ATPases associated with a variety of cellular activities AFK25_RS14435 SM00857 Resolvase, N terminal domain AFK25_RS14440 SM00885 D5 N terminal like AFK25_RS14490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AFK25_RS14495 SM00849 Metallo-beta-lactamase superfamily AFK25_RS14510 SM00091 PAS domain AFK25_RS14510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AFK25_RS14510 SM00387 Histidine kinase-like ATPases AFK25_RS14510 SM00388 His Kinase A (phosphoacceptor) domain AFK25_RS14515 SM00448 cheY-homologous receiver domain AFK25_RS14515 SM00862 Transcriptional regulatory protein, C terminal AFK25_RS14530 SM00788 Adenylosuccinate synthetase AFK25_RS14545 SM00267 diguanylate cyclase AFK25_RS14595 SM00470 ParB-like nuclease domain AFK25_RS14605 SM00470 ParB-like nuclease domain AFK25_RS14615 SM01228 AFK25_RS14615 AFK25_RS14625 SM00393 Putative single-stranded nucleic acids-binding domain AFK25_RS14625 SM01245 AFK25_RS14625