locus-tag class description IRT44_RS00045 PF16123 Hydroxyacylglutathione hydrolase C-terminus IRT44_RS00045 PF00753 Metallo-beta-lactamase superfamily IRT44_RS00050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_RS00050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_RS00055 PF01595 Cyclin M transmembrane N-terminal domain IRT44_RS00055 PF03471 Transporter associated domain IRT44_RS00055 PF00571 CBS domain IRT44_RS00060 PF00580 UvrD/REP helicase N-terminal domain IRT44_RS00060 PF13361 UvrD-like helicase C-terminal domain IRT44_RS00090 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS00090 PF00155 Aminotransferase class I and II IRT44_RS00095 PF03591 AzlC protein IRT44_RS00105 PF01584 CheW-like domain IRT44_RS00130 PF01975 Survival protein SurE IRT44_RS00140 PF12793 Sugar transport-related sRNA regulator N-term IRT44_RS00140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS00145 PF07690 Major Facilitator Superfamily IRT44_RS00150 PF00005 ABC transporter IRT44_RS00155 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS00170 PF00571 CBS domain IRT44_RS00170 PF01595 Cyclin M transmembrane N-terminal domain IRT44_RS00170 PF03471 Transporter associated domain IRT44_RS00180 PF08281 Sigma-70, region 4 IRT44_RS00180 PF04542 Sigma-70 region 2 IRT44_RS00190 PF12679 ABC-2 family transporter protein IRT44_RS00205 PF07690 Major Facilitator Superfamily IRT44_RS00210 PF00753 Metallo-beta-lactamase superfamily IRT44_RS00220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IRT44_RS00220 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS00235 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_RS00245 PF07690 Major Facilitator Superfamily IRT44_RS00250 PF05225 helix-turn-helix, Psq domain IRT44_RS00250 PF02810 SEC-C motif IRT44_RS00265 PF01966 HD domain IRT44_RS00265 PF01336 OB-fold nucleic acid binding domain IRT44_RS00290 PF02540 NAD synthase IRT44_RS00295 PF00557 Metallopeptidase family M24 IRT44_RS00315 PF01613 Flavin reductase like domain IRT44_RS00320 PF04209 homogentisate 1,2-dioxygenase IRT44_RS00325 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_RS00330 PF00849 RNA pseudouridylate synthase IRT44_RS00340 PF08534 Redoxin IRT44_RS00355 PF00682 HMGL-like IRT44_RS00355 PF02785 Biotin carboxylase C-terminal domain IRT44_RS00355 PF02436 Conserved carboxylase domain IRT44_RS00355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_RS00355 PF00364 Biotin-requiring enzyme IRT44_RS00355 PF00289 Biotin carboxylase, N-terminal domain IRT44_RS00365 PF09579 Sporulation protein YtfJ (Spore_YtfJ) IRT44_RS00375 PF06725 3D domain IRT44_RS00375 PF01476 LysM domain IRT44_RS00380 PF03734 L,D-transpeptidase catalytic domain IRT44_RS00385 PF07486 Cell Wall Hydrolase IRT44_RS00385 PF01471 Putative peptidoglycan binding domain IRT44_RS00390 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_RS00395 PF07451 Stage V sporulation protein AD (SpoVAD) IRT44_RS00400 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_RS00405 PF04239 Protein of unknown function (DUF421) IRT44_RS00415 PF00269 Small, acid-soluble spore proteins, alpha/beta type IRT44_RS00420 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase IRT44_RS00420 PF04101 Glycosyltransferase family 28 C-terminal domain IRT44_RS00430 PF03741 Integral membrane protein TerC family IRT44_RS00435 PF08447 PAS fold IRT44_RS00435 PF00989 PAS fold IRT44_RS00435 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS00540 PF13333 Integrase core domain IRT44_RS00540 PF00665 Integrase core domain IRT44_RS00540 PF13276 HTH-like domain IRT44_RS00545 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_RS00550 PF02926 THUMP domain IRT44_RS00550 PF02568 Thiamine biosynthesis protein (ThiI) IRT44_RS00555 PF00266 Aminotransferase class-V IRT44_RS00565 PF01678 Diaminopimelate epimerase IRT44_RS00580 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) IRT44_RS00590 PF00106 short chain dehydrogenase IRT44_RS00595 PF07690 Major Facilitator Superfamily IRT44_RS00610 PF06018 CodY GAF-like domain IRT44_RS00610 PF08222 CodY helix-turn-helix domain IRT44_RS00615 PF07070 SpoOM protein IRT44_RS00625 PF14034 Sporulation protein YtrH IRT44_RS00635 PF07690 Major Facilitator Superfamily IRT44_RS00645 PF01966 HD domain IRT44_RS00655 PF05343 M42 glutamyl aminopeptidase IRT44_RS00670 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS00680 PF06160 Septation ring formation regulator, EzrA IRT44_RS00685 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS00695 PF00753 Metallo-beta-lactamase superfamily IRT44_RS00700 PF00990 Diguanylate cyclase, GGDEF domain IRT44_RS00705 PF00300 Histidine phosphatase superfamily (branch 1) IRT44_RS00715 PF00395 S-layer homology domain IRT44_RS00715 PF02903 Alpha amylase, N-terminal ig-like domain IRT44_RS00715 PF00128 Alpha amylase, catalytic domain IRT44_RS00720 PF01479 S4 domain IRT44_RS00720 PF00163 Ribosomal protein S4/S9 N-terminal domain IRT44_RS00730 PF01479 S4 domain IRT44_RS00730 PF00579 tRNA synthetases class I (W and Y) IRT44_RS00735 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS00735 PF00912 Transglycosylase IRT44_RS00740 PF00583 Acetyltransferase (GNAT) family IRT44_RS00745 PF00571 CBS domain IRT44_RS00750 PF00850 Histone deacetylase domain IRT44_RS00755 PF01048 Phosphorylase superfamily IRT44_RS00760 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS00770 PF01817 Chorismate mutase type II IRT44_RS00770 PF00793 DAHP synthetase I family IRT44_RS00775 PF02491 SHS2 domain inserted in FTSA IRT44_RS00780 PF11009 Protein of unknown function (DUF2847) IRT44_RS00800 PF02073 Thermophilic metalloprotease (M29) IRT44_RS00805 PF10400 Virulence activator alpha C-term IRT44_RS00805 PF03551 Transcriptional regulator PadR-like family IRT44_RS00815 PF01638 HxlR-like helix-turn-helix IRT44_RS00820 PF02796 Helix-turn-helix domain of resolvase IRT44_RS00820 PF00239 Resolvase, N terminal domain IRT44_RS00845 PF04454 Encapsulating protein for peroxidase IRT44_RS00850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS00855 PF00155 Aminotransferase class I and II IRT44_RS00865 PF00155 Aminotransferase class I and II IRT44_RS00870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_RS00875 PF00873 AcrB/AcrD/AcrF family IRT44_RS00880 PF01047 MarR family IRT44_RS00885 PF07690 Major Facilitator Superfamily IRT44_RS00890 PF01967 MoaC family IRT44_RS00895 PF02391 MoaE protein IRT44_RS00900 PF00899 ThiF family IRT44_RS00905 PF00330 Aconitase family (aconitate hydratase) IRT44_RS00905 PF00694 Aconitase C-terminal domain IRT44_RS00915 PF01695 IstB-like ATP binding protein IRT44_RS00920 PF02796 Helix-turn-helix domain of resolvase IRT44_RS00920 PF00665 Integrase core domain IRT44_RS00935 PF09339 IclR helix-turn-helix domain IRT44_RS00935 PF01614 Bacterial transcriptional regulator IRT44_RS00940 PF00248 Aldo/keto reductase family IRT44_RS00950 PF08240 Alcohol dehydrogenase GroES-like domain IRT44_RS00950 PF00107 Zinc-binding dehydrogenase IRT44_RS00955 PF03466 LysR substrate binding domain IRT44_RS00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS00960 PF00892 EamA-like transporter family IRT44_RS00970 PF10502 Signal peptidase, peptidase S26 IRT44_RS00980 PF17854 FtsK alpha domain IRT44_RS00980 PF09397 Ftsk gamma domain IRT44_RS00980 PF01580 FtsK/SpoIIIE family IRT44_RS00995 PF01747 ATP-sulfurylase IRT44_RS00995 PF14306 PUA-like domain IRT44_RS01000 PF01507 Phosphoadenosine phosphosulfate reductase family IRT44_RS01005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS01015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IRT44_RS01015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IRT44_RS01025 PF00459 Inositol monophosphatase family IRT44_RS01040 PF00920 Dehydratase family IRT44_RS01045 PF13378 Enolase C-terminal domain-like IRT44_RS01045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IRT44_RS01055 PF02390 Putative methyltransferase IRT44_RS01060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS01065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_RS01085 PF03734 L,D-transpeptidase catalytic domain IRT44_RS01085 PF01476 LysM domain IRT44_RS01095 PF00912 Transglycosylase IRT44_RS01095 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS01100 PF02779 Transketolase, pyrimidine binding domain IRT44_RS01100 PF02780 Transketolase, C-terminal domain IRT44_RS01100 PF00456 Transketolase, thiamine diphosphate binding domain IRT44_RS01110 PF13344 Haloacid dehalogenase-like hydrolase IRT44_RS01110 PF00293 NUDIX domain IRT44_RS01115 PF13426 PAS domain IRT44_RS01115 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS01115 PF00672 HAMP domain IRT44_RS01120 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS01120 PF00072 Response regulator receiver domain IRT44_RS01125 PF09335 SNARE associated Golgi protein IRT44_RS01145 PF07690 Major Facilitator Superfamily IRT44_RS01150 PF16326 ABC transporter C-terminal domain IRT44_RS01150 PF00005 ABC transporter IRT44_RS01150 PF12848 ABC transporter IRT44_RS01170 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_RS01175 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_RS01180 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01185 PF00005 ABC transporter IRT44_RS01195 PF00723 Glycosyl hydrolases family 15 IRT44_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01215 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS01225 PF00459 Inositol monophosphatase family IRT44_RS01235 PF02554 Carbon starvation protein CstA IRT44_RS01235 PF13722 5TM C-terminal transporter carbon starvation CstA IRT44_RS01240 PF04397 LytTr DNA-binding domain IRT44_RS01240 PF00072 Response regulator receiver domain IRT44_RS01245 PF13492 GAF domain IRT44_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS01245 PF06580 Histidine kinase IRT44_RS01245 PF07694 5TMR of 5TMR-LYT IRT44_RS01250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_RS01255 PF08241 Methyltransferase domain IRT44_RS01270 PF17126 RsmF rRNA methyltransferase first C-terminal domain IRT44_RS01270 PF01189 16S rRNA methyltransferase RsmB/F IRT44_RS01270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IRT44_RS01275 PF00271 Helicase conserved C-terminal domain IRT44_RS01275 PF00270 DEAD/DEAH box helicase IRT44_RS01280 PF01546 Peptidase family M20/M25/M40 IRT44_RS01285 PF04607 Region found in RelA / SpoT proteins IRT44_RS01290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS01290 PF08447 PAS fold IRT44_RS01290 PF13426 PAS domain IRT44_RS01305 PF12392 Collagenase IRT44_RS01305 PF01136 Peptidase family U32 IRT44_RS01310 PF06569 Protein of unknown function (DUF1128) IRT44_RS01320 PF05977 Transmembrane secretion effector IRT44_RS01325 PF08502 LeuA allosteric (dimerisation) domain IRT44_RS01325 PF00682 HMGL-like IRT44_RS01335 PF14398 YheC/D like ATP-grasp IRT44_RS01340 PF07687 Peptidase dimerisation domain IRT44_RS01340 PF01546 Peptidase family M20/M25/M40 IRT44_RS01345 PF00186 Dihydrofolate reductase IRT44_RS01350 PF00303 Thymidylate synthase IRT44_RS01365 PF00155 Aminotransferase class I and II IRT44_RS01365 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS01370 PF00313 'Cold-shock' DNA-binding domain IRT44_RS01375 PF00474 Sodium:solute symporter family IRT44_RS01380 PF00155 Aminotransferase class I and II IRT44_RS01380 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS01385 PF00350 Dynamin family IRT44_RS01390 PF00350 Dynamin family IRT44_RS01395 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_RS01400 PF03845 Spore germination protein IRT44_RS01405 PF05504 Spore germination B3/ GerAC like, C-terminal IRT44_RS01415 PF03845 Spore germination protein IRT44_RS01420 PF00403 Heavy-metal-associated domain IRT44_RS01425 PF01022 Bacterial regulatory protein, arsR family IRT44_RS01430 PF07670 Nucleoside recognition IRT44_RS01430 PF02421 Ferrous iron transport protein B IRT44_RS01430 PF04023 FeoA domain IRT44_RS01430 PF07664 Ferrous iron transport protein B C terminus IRT44_RS01430 PF17910 FeoB cytosolic helical domain IRT44_RS01435 PF07664 Ferrous iron transport protein B C terminus IRT44_RS01435 PF17910 FeoB cytosolic helical domain IRT44_RS01435 PF02421 Ferrous iron transport protein B IRT44_RS01435 PF07670 Nucleoside recognition IRT44_RS01440 PF07670 Nucleoside recognition IRT44_RS01440 PF07664 Ferrous iron transport protein B C terminus IRT44_RS01440 PF17910 FeoB cytosolic helical domain IRT44_RS01440 PF02421 Ferrous iron transport protein B IRT44_RS01455 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS01460 PF00005 ABC transporter IRT44_RS01475 PF00465 Iron-containing alcohol dehydrogenase IRT44_RS01480 PF00171 Aldehyde dehydrogenase family IRT44_RS01485 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS01490 PF00860 Permease family IRT44_RS01495 PF00156 Phosphoribosyl transferase domain IRT44_RS01500 PF03193 RsgA GTPase IRT44_RS01520 PF00561 alpha/beta hydrolase fold IRT44_RS01525 PF13416 Bacterial extracellular solute-binding protein IRT44_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01540 PF00005 ABC transporter IRT44_RS01540 PF08402 TOBE domain IRT44_RS01545 PF03551 Transcriptional regulator PadR-like family IRT44_RS01545 PF10400 Virulence activator alpha C-term IRT44_RS01550 PF13407 Periplasmic binding protein domain IRT44_RS01555 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS01560 PF00005 ABC transporter IRT44_RS01565 PF05025 RbsD / FucU transport protein family IRT44_RS01570 PF00294 pfkB family carbohydrate kinase IRT44_RS01575 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS01580 PF02589 LUD domain IRT44_RS01585 PF11870 Domain of unknown function (DUF3390) IRT44_RS01585 PF13183 4Fe-4S dicluster domain IRT44_RS01585 PF02589 LUD domain IRT44_RS01590 PF02754 Cysteine-rich domain IRT44_RS01595 PF07729 FCD domain IRT44_RS01595 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS01600 PF02652 L-lactate permease IRT44_RS01610 PF01979 Amidohydrolase family IRT44_RS01615 PF00583 Acetyltransferase (GNAT) family IRT44_RS01625 PF03060 Nitronate monooxygenase IRT44_RS01630 PF00293 NUDIX domain IRT44_RS01640 PF02585 GlcNAc-PI de-N-acetylase IRT44_RS01645 PF01869 BadF/BadG/BcrA/BcrD ATPase family IRT44_RS01650 PF14698 Argininosuccinate lyase C-terminal IRT44_RS01650 PF00206 Lyase IRT44_RS01655 PF02585 GlcNAc-PI de-N-acetylase IRT44_RS01660 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01665 PF00005 ABC transporter IRT44_RS01665 PF08402 TOBE domain IRT44_RS01675 PF01047 MarR family IRT44_RS01675 PF00480 ROK family IRT44_RS01685 PF02743 Cache domain IRT44_RS01685 PF00672 HAMP domain IRT44_RS01685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS01695 PF06778 Chlorite dismutase IRT44_RS01700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IRT44_RS01705 PF01380 SIS domain IRT44_RS01705 PF01418 Helix-turn-helix domain, rpiR family IRT44_RS01710 PF07457 Protein of unknown function (DUF1516) IRT44_RS01715 PF03477 ATP cone domain IRT44_RS01715 PF02867 Ribonucleotide reductase, barrel domain IRT44_RS01715 PF00317 Ribonucleotide reductase, all-alpha domain IRT44_RS01720 PF00268 Ribonucleotide reductase, small chain IRT44_RS01725 PF00501 AMP-binding enzyme IRT44_RS01725 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS01730 PF01325 Iron dependent repressor, N-terminal DNA binding domain IRT44_RS01730 PF00480 ROK family IRT44_RS01740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_RS01740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_RS01740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_RS01740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_RS01745 PF16363 GDP-mannose 4,6 dehydratase IRT44_RS01750 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IRT44_RS01750 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IRT44_RS01755 PF10509 Galactokinase galactose-binding signature IRT44_RS01755 PF08544 GHMP kinases C terminal IRT44_RS01755 PF00288 GHMP kinases N terminal domain IRT44_RS01765 PF03932 CutC family IRT44_RS01770 PF06508 Queuosine biosynthesis protein QueC IRT44_RS01775 PF01242 6-pyruvoyl tetrahydropterin synthase IRT44_RS01780 PF04055 Radical SAM superfamily IRT44_RS01785 PF14489 QueF-like protein IRT44_RS01795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_RS01795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IRT44_RS01800 PF02954 Bacterial regulatory protein, Fis family IRT44_RS01800 PF13426 PAS domain IRT44_RS01800 PF00158 Sigma-54 interaction domain IRT44_RS01805 PF00171 Aldehyde dehydrogenase family IRT44_RS01815 PF13458 Periplasmic binding protein IRT44_RS01820 PF01476 LysM domain IRT44_RS01820 PF03734 L,D-transpeptidase catalytic domain IRT44_RS01830 PF00005 ABC transporter IRT44_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01840 PF00296 Luciferase-like monooxygenase IRT44_RS01845 PF09084 NMT1/THI5 like IRT44_RS01855 PF01970 Tripartite tricarboxylate transporter TctA family IRT44_RS01865 PF18719 ArlS sensor domain IRT44_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS01865 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS01870 PF00072 Response regulator receiver domain IRT44_RS01870 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS01895 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS01900 PF00005 ABC transporter IRT44_RS01900 PF09383 NIL domain IRT44_RS01905 PF03180 NLPA lipoprotein IRT44_RS01915 PF00174 Oxidoreductase molybdopterin binding domain IRT44_RS01920 PF13380 CoA binding domain IRT44_RS01925 PF00883 Cytosol aminopeptidase family, catalytic domain IRT44_RS01925 PF02789 Cytosol aminopeptidase family, N-terminal domain IRT44_RS01935 PF02681 Divergent PAP2 family IRT44_RS01940 PF01497 Periplasmic binding protein IRT44_RS01945 PF06725 3D domain IRT44_RS01955 PF17302 Family of unknown function (DUF5351) IRT44_RS01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS01970 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS02000 PF01521 Iron-sulphur cluster biosynthesis IRT44_RS02010 PF04055 Radical SAM superfamily IRT44_RS02015 PF07293 Protein of unknown function (DUF1450) IRT44_RS02020 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS02025 PF13333 Integrase core domain IRT44_RS02025 PF13276 HTH-like domain IRT44_RS02025 PF00665 Integrase core domain IRT44_RS02040 PF07315 Protein of unknown function (DUF1462) IRT44_RS02045 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_RS02050 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_RS02055 PF01106 NifU-like domain IRT44_RS02070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_RS02070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_RS02080 PF04608 Phosphatidylglycerophosphatase A IRT44_RS02085 PF13344 Haloacid dehalogenase-like hydrolase IRT44_RS02095 PF01934 Protein of unknown function DUF86 IRT44_RS02105 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IRT44_RS02115 PF06265 Protein of unknown function (DUF1027) IRT44_RS02125 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IRT44_RS02125 PF04055 Radical SAM superfamily IRT44_RS02135 PF00149 Calcineurin-like phosphoesterase IRT44_RS02140 PF01969 Protein of unknown function DUF111 IRT44_RS02150 PF01969 Protein of unknown function DUF111 IRT44_RS02155 PF01551 Peptidase family M23 IRT44_RS02160 PF00171 Aldehyde dehydrogenase family IRT44_RS02165 PF00885 6,7-dimethyl-8-ribityllumazine synthase IRT44_RS02170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IRT44_RS02170 PF00925 GTP cyclohydrolase II IRT44_RS02175 PF00677 Lumazine binding domain IRT44_RS02180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IRT44_RS02180 PF01872 RibD C-terminal domain IRT44_RS02185 PF09560 Sporulation protein YunB (Spo_YunB) IRT44_RS02190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_RS02195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_RS02195 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IRT44_RS02200 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_RS02205 PF00682 HMGL-like IRT44_RS02210 PF02515 CoA-transferase family III IRT44_RS02215 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS02215 PF07729 FCD domain IRT44_RS02220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_RS02225 PF00027 Cyclic nucleotide-binding domain IRT44_RS02225 PF13545 Crp-like helix-turn-helix domain IRT44_RS02230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS02240 PF01544 CorA-like Mg2+ transporter protein IRT44_RS02245 PF11871 Domain of unknown function (DUF3391) IRT44_RS02245 PF01966 HD domain IRT44_RS02250 PF08827 Domain of unknown function (DUF1805) IRT44_RS02260 PF02872 5'-nucleotidase, C-terminal domain IRT44_RS02265 PF01925 Sulfite exporter TauE/SafE IRT44_RS02270 PF01904 Protein of unknown function DUF72 IRT44_RS02280 PF05504 Spore germination B3/ GerAC like, C-terminal IRT44_RS02285 PF03845 Spore germination protein IRT44_RS02290 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_RS02295 PF15975 Flotillin IRT44_RS02295 PF01145 SPFH domain / Band 7 family IRT44_RS02305 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS02305 PF00155 Aminotransferase class I and II IRT44_RS02310 PF00892 EamA-like transporter family IRT44_RS02315 PF05343 M42 glutamyl aminopeptidase IRT44_RS02335 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_RS02335 PF05036 Sporulation related domain IRT44_RS02340 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IRT44_RS02340 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IRT44_RS02365 PF01458 Uncharacterized protein family (UPF0051) IRT44_RS02370 PF01592 NifU-like N terminal domain IRT44_RS02375 PF00266 Aminotransferase class-V IRT44_RS02380 PF01458 Uncharacterized protein family (UPF0051) IRT44_RS02385 PF00005 ABC transporter IRT44_RS02390 PF01293 Phosphoenolpyruvate carboxykinase IRT44_RS02395 PF07687 Peptidase dimerisation domain IRT44_RS02395 PF01546 Peptidase family M20/M25/M40 IRT44_RS02415 PF01597 Glycine cleavage H-protein IRT44_RS02420 PF00578 AhpC/TSA family IRT44_RS02425 PF00578 AhpC/TSA family IRT44_RS02425 PF10417 C-terminal domain of 1-Cys peroxiredoxin IRT44_RS02430 PF00155 Aminotransferase class I and II IRT44_RS02435 PF03960 ArsC family IRT44_RS02450 PF01522 Polysaccharide deacetylase IRT44_RS02455 PF00005 ABC transporter IRT44_RS02470 PF07690 Major Facilitator Superfamily IRT44_RS02475 PF13302 Acetyltransferase (GNAT) domain IRT44_RS02480 PF01008 Initiation factor 2 subunit family IRT44_RS02485 PF01636 Phosphotransferase enzyme family IRT44_RS02490 PF13791 Sigma factor regulator C-terminal IRT44_RS02490 PF13800 Sigma factor regulator N-terminal IRT44_RS02495 PF08281 Sigma-70, region 4 IRT44_RS02495 PF04542 Sigma-70 region 2 IRT44_RS02505 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain IRT44_RS02505 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain IRT44_RS02515 PF00596 Class II Aldolase and Adducin N-terminal domain IRT44_RS02520 PF03079 ARD/ARD' family IRT44_RS02525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_RS02525 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_RS02525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_RS02530 PF02803 Thiolase, C-terminal domain IRT44_RS02530 PF00108 Thiolase, N-terminal domain IRT44_RS02535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IRT44_RS02535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IRT44_RS02535 PF00378 Enoyl-CoA hydratase/isomerase IRT44_RS02550 PF00005 ABC transporter IRT44_RS02560 PF00696 Amino acid kinase family IRT44_RS02560 PF01472 PUA domain IRT44_RS02565 PF00171 Aldehyde dehydrogenase family IRT44_RS02570 PF03807 NADP oxidoreductase coenzyme F420-dependent IRT44_RS02570 PF14748 Pyrroline-5-carboxylate reductase dimerisation IRT44_RS02585 PF07875 Coat F domain IRT44_RS02590 PF00155 Aminotransferase class I and II IRT44_RS02590 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS02595 PF01810 LysE type translocator IRT44_RS02620 PF12832 MFS_1 like family IRT44_RS02630 PF08546 Ketopantoate reductase PanE/ApbA C terminal IRT44_RS02630 PF02558 Ketopantoate reductase PanE/ApbA IRT44_RS02635 PF00120 Glutamine synthetase, catalytic domain IRT44_RS02635 PF03951 Glutamine synthetase, beta-Grasp domain IRT44_RS02640 PF00005 ABC transporter IRT44_RS02650 PF02553 Cobalt transport protein component CbiN IRT44_RS02655 PF01891 Cobalt uptake substrate-specific transmembrane region IRT44_RS02660 PF01180 Dihydroorotate dehydrogenase IRT44_RS02670 PF01695 IstB-like ATP binding protein IRT44_RS02675 PF00665 Integrase core domain IRT44_RS02685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IRT44_RS02685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IRT44_RS02690 PF06018 CodY GAF-like domain IRT44_RS02690 PF17853 GGDEF-like domain IRT44_RS02690 PF13556 PucR C-terminal helix-turn-helix domain IRT44_RS02695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_RS02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS02700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IRT44_RS02700 PF00364 Biotin-requiring enzyme IRT44_RS02700 PF02817 e3 binding domain IRT44_RS02705 PF02780 Transketolase, C-terminal domain IRT44_RS02705 PF02779 Transketolase, pyrimidine binding domain IRT44_RS02710 PF00676 Dehydrogenase E1 component IRT44_RS02715 PF03099 Biotin/lipoate A/B protein ligase family IRT44_RS02720 PF01590 GAF domain IRT44_RS02720 PF00158 Sigma-54 interaction domain IRT44_RS02720 PF02954 Bacterial regulatory protein, Fis family IRT44_RS02725 PF00072 Response regulator receiver domain IRT44_RS02740 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS02740 PF00989 PAS fold IRT44_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS02740 PF08447 PAS fold IRT44_RS02745 PF00326 Prolyl oligopeptidase family IRT44_RS02750 PF00575 S1 RNA binding domain IRT44_RS02760 PF00873 AcrB/AcrD/AcrF family IRT44_RS02770 PF01144 Coenzyme A transferase IRT44_RS02775 PF01144 Coenzyme A transferase IRT44_RS02780 PF12697 Alpha/beta hydrolase family IRT44_RS02795 PF03466 LysR substrate binding domain IRT44_RS02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS02800 PF01810 LysE type translocator IRT44_RS02805 PF01842 ACT domain IRT44_RS02805 PF00551 Formyl transferase IRT44_RS02810 PF08240 Alcohol dehydrogenase GroES-like domain IRT44_RS02810 PF00107 Zinc-binding dehydrogenase IRT44_RS02815 PF00465 Iron-containing alcohol dehydrogenase IRT44_RS02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS02820 PF00989 PAS fold IRT44_RS02820 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS02830 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS02840 PF00005 ABC transporter IRT44_RS02845 PF13533 Biotin-lipoyl like IRT44_RS02850 PF13520 Amino acid permease IRT44_RS02855 PF12705 PD-(D/E)XK nuclease superfamily IRT44_RS02855 PF13361 UvrD-like helicase C-terminal domain IRT44_RS02855 PF00580 UvrD/REP helicase N-terminal domain IRT44_RS02860 PF12705 PD-(D/E)XK nuclease superfamily IRT44_RS02860 PF13361 UvrD-like helicase C-terminal domain IRT44_RS02865 PF13476 AAA domain IRT44_RS02875 PF02628 Cytochrome oxidase assembly protein IRT44_RS02880 PF01040 UbiA prenyltransferase family IRT44_RS02890 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) IRT44_RS02895 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IRT44_RS02900 PF00510 Cytochrome c oxidase subunit III IRT44_RS02905 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_RS02910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IRT44_RS02910 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IRT44_RS02910 PF00034 Cytochrome c IRT44_RS02920 PF07690 Major Facilitator Superfamily IRT44_RS02935 PF01734 Patatin-like phospholipase IRT44_RS02945 PF04055 Radical SAM superfamily IRT44_RS02945 PF13186 Iron-sulfur cluster-binding domain IRT44_RS02950 PF01790 Prolipoprotein diacylglyceryl transferase IRT44_RS02970 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_RS02970 PF17863 AAA lid domain IRT44_RS02985 PF00005 ABC transporter IRT44_RS03000 PF00893 Small Multidrug Resistance protein IRT44_RS03010 PF13302 Acetyltransferase (GNAT) domain IRT44_RS03025 PF13411 MerR HTH family regulatory protein IRT44_RS03025 PF07739 TipAS antibiotic-recognition domain IRT44_RS03030 PF13482 RNase_H superfamily IRT44_RS03035 PF00271 Helicase conserved C-terminal domain IRT44_RS03035 PF00270 DEAD/DEAH box helicase IRT44_RS03035 PF09369 Domain of unknown function (DUF1998) IRT44_RS03040 PF00106 short chain dehydrogenase IRT44_RS03045 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IRT44_RS03050 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS03055 PF00005 ABC transporter IRT44_RS03055 PF00571 CBS domain IRT44_RS03060 PF12802 MarR family IRT44_RS03065 PF00296 Luciferase-like monooxygenase IRT44_RS03070 PF01497 Periplasmic binding protein IRT44_RS03075 PF00005 ABC transporter IRT44_RS03080 PF01032 FecCD transport family IRT44_RS03085 PF01032 FecCD transport family IRT44_RS03090 PF00881 Nitroreductase family IRT44_RS03115 PF00005 ABC transporter IRT44_RS03115 PF02687 FtsX-like permease family IRT44_RS03115 PF12704 MacB-like periplasmic core domain IRT44_RS03120 PF00005 ABC transporter IRT44_RS03125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_RS03130 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS03130 PF00072 Response regulator receiver domain IRT44_RS03135 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS03145 PF02743 Cache domain IRT44_RS03145 PF00672 HAMP domain IRT44_RS03145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS03150 PF16123 Hydroxyacylglutathione hydrolase C-terminus IRT44_RS03150 PF00753 Metallo-beta-lactamase superfamily IRT44_RS03155 PF00394 Multicopper oxidase IRT44_RS03155 PF07731 Multicopper oxidase IRT44_RS03155 PF07732 Multicopper oxidase IRT44_RS03160 PF01494 FAD binding domain IRT44_RS03165 PF01047 MarR family IRT44_RS03200 PF01668 SmpB protein IRT44_RS03205 PF00575 S1 RNA binding domain IRT44_RS03205 PF17876 Cold shock domain IRT44_RS03205 PF00773 RNB domain IRT44_RS03205 PF08206 Ribonuclease B OB domain IRT44_RS03210 PF03840 Preprotein translocase SecG subunit IRT44_RS03215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IRT44_RS03220 PF00005 ABC transporter IRT44_RS03230 PF01497 Periplasmic binding protein IRT44_RS03235 PF01032 FecCD transport family IRT44_RS03240 PF01032 FecCD transport family IRT44_RS03245 PF00005 ABC transporter IRT44_RS03250 PF03952 Enolase, N-terminal domain IRT44_RS03250 PF00113 Enolase, C-terminal TIM barrel domain IRT44_RS03255 PF01676 Metalloenzyme superfamily IRT44_RS03255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IRT44_RS03260 PF00121 Triosephosphate isomerase IRT44_RS03265 PF00162 Phosphoglycerate kinase IRT44_RS03270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IRT44_RS03270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IRT44_RS03275 PF03553 Na+/H+ antiporter family IRT44_RS03280 PF04198 Putative sugar-binding domain IRT44_RS03290 PF04963 Sigma-54 factor, core binding domain IRT44_RS03290 PF00309 Sigma-54 factor, Activator interacting domain (AID) IRT44_RS03290 PF04552 Sigma-54, DNA binding domain IRT44_RS03315 PF08281 Sigma-70, region 4 IRT44_RS03315 PF04542 Sigma-70 region 2 IRT44_RS03330 PF00574 Clp protease IRT44_RS03350 PF00381 PTS HPr component phosphorylation site IRT44_RS03355 PF14527 WhiA LAGLIDADG-like domain IRT44_RS03355 PF02650 WhiA C-terminal HTH domain IRT44_RS03355 PF10298 WhiA N-terminal LAGLIDADG-like domain IRT44_RS03360 PF01933 Uncharacterised protein family UPF0052 IRT44_RS03365 PF03668 P-loop ATPase protein family IRT44_RS03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS03425 PF16868 NMT1-like family IRT44_RS03430 PF02954 Bacterial regulatory protein, Fis family IRT44_RS03430 PF00072 Response regulator receiver domain IRT44_RS03430 PF00158 Sigma-54 interaction domain IRT44_RS03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS03435 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS03435 PF00989 PAS fold IRT44_RS03445 PF01502 Phosphoribosyl-AMP cyclohydrolase IRT44_RS03445 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IRT44_RS03450 PF00977 Histidine biosynthesis protein IRT44_RS03455 PF00977 Histidine biosynthesis protein IRT44_RS03460 PF00117 Glutamine amidotransferase class-I IRT44_RS03465 PF00475 Imidazoleglycerol-phosphate dehydratase IRT44_RS03470 PF00815 Histidinol dehydrogenase IRT44_RS03475 PF01634 ATP phosphoribosyltransferase IRT44_RS03480 PF13393 Histidyl-tRNA synthetase IRT44_RS03485 PF14602 Hexapeptide repeat of succinyl-transferase IRT44_RS03490 PF07475 HPr Serine kinase C-terminal domain IRT44_RS03490 PF02603 HPr Serine kinase N terminus IRT44_RS03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS03495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_RS03505 PF01966 HD domain IRT44_RS03510 PF17755 UvrA DNA-binding domain IRT44_RS03510 PF17760 UvrA interaction domain IRT44_RS03515 PF04851 Type III restriction enzyme, res subunit IRT44_RS03515 PF00271 Helicase conserved C-terminal domain IRT44_RS03515 PF02151 UvrB/uvrC motif IRT44_RS03515 PF17757 UvrB interaction domain IRT44_RS03515 PF12344 Ultra-violet resistance protein B IRT44_RS03520 PF03963 Flagellar hook capping protein - N-terminal region IRT44_RS03530 PF17820 PDZ domain IRT44_RS03535 PF17820 PDZ domain IRT44_RS03535 PF03572 Peptidase family S41 IRT44_RS03535 PF01471 Putative peptidoglycan binding domain IRT44_RS03540 PF01476 LysM domain IRT44_RS03540 PF08525 Opacity-associated protein A N-terminal motif IRT44_RS03540 PF01551 Peptidase family M23 IRT44_RS03545 PF18075 FtsX extracellular domain IRT44_RS03545 PF02687 FtsX-like permease family IRT44_RS03550 PF00005 ABC transporter IRT44_RS03555 PF00465 Iron-containing alcohol dehydrogenase IRT44_RS03560 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS03565 PF14698 Argininosuccinate lyase C-terminal IRT44_RS03565 PF00206 Lyase IRT44_RS03570 PF00764 Arginosuccinate synthase IRT44_RS03580 PF01966 HD domain IRT44_RS03590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IRT44_RS03590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IRT44_RS03595 PF02142 MGS-like domain IRT44_RS03595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IRT44_RS03595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_RS03600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IRT44_RS03600 PF00117 Glutamine amidotransferase class-I IRT44_RS03605 PF00202 Aminotransferase class-III IRT44_RS03610 PF00696 Amino acid kinase family IRT44_RS03615 PF01118 Semialdehyde dehydrogenase, NAD binding domain IRT44_RS03615 PF02774 Semialdehyde dehydrogenase, dimerisation domain IRT44_RS03620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IRT44_RS03640 PF07517 SecA DEAD-like domain IRT44_RS03640 PF01043 SecA preprotein cross-linking domain IRT44_RS03640 PF07516 SecA Wing and Scaffold domain IRT44_RS03645 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus IRT44_RS03645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IRT44_RS03650 PF00313 'Cold-shock' DNA-binding domain IRT44_RS03655 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS03660 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_RS03665 PF13677 Membrane MotB of proton-channel complex MotA/MotB IRT44_RS03665 PF00691 OmpA family IRT44_RS03670 PF01618 MotA/TolQ/ExbB proton channel family IRT44_RS03685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS03700 PF02561 Flagellar protein FliS IRT44_RS03705 PF07196 Flagellin hook IN motif IRT44_RS03705 PF07195 Flagellar hook-associated protein 2 C-terminus IRT44_RS03705 PF02465 Flagellar hook-associated protein 2 N-terminus IRT44_RS03710 PF03646 FlaG protein IRT44_RS03715 PF00535 Glycosyl transferase family 2 IRT44_RS03720 PF00535 Glycosyl transferase family 2 IRT44_RS03720 PF13181 Tetratricopeptide repeat IRT44_RS03725 PF00669 Bacterial flagellin N-terminal helical region IRT44_RS03725 PF00700 Bacterial flagellin C-terminal helical region IRT44_RS03730 PF02599 Global regulator protein family IRT44_RS03735 PF02623 FliW protein IRT44_RS03745 PF00700 Bacterial flagellin C-terminal helical region IRT44_RS03745 PF00669 Bacterial flagellin N-terminal helical region IRT44_RS03750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_RS03750 PF00460 Flagella basal body rod protein IRT44_RS03775 PF04851 Type III restriction enzyme, res subunit IRT44_RS03775 PF00271 Helicase conserved C-terminal domain IRT44_RS03785 PF00072 Response regulator receiver domain IRT44_RS03785 PF00196 Bacterial regulatory proteins, luxR family IRT44_RS03790 PF07730 Histidine kinase IRT44_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS03790 PF05384 Sensor protein DegS IRT44_RS03795 PF14883 Hypothetical glycosyl hydrolase family 13 IRT44_RS03795 PF01522 Polysaccharide deacetylase IRT44_RS03800 PF02773 S-adenosylmethionine synthetase, C-terminal domain IRT44_RS03800 PF02772 S-adenosylmethionine synthetase, central domain IRT44_RS03800 PF00438 S-adenosylmethionine synthetase, N-terminal domain IRT44_RS03810 PF00082 Subtilase family IRT44_RS03810 PF05922 Peptidase inhibitor I9 IRT44_RS03835 PF00248 Aldo/keto reductase family IRT44_RS03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS03840 PF12729 Four helix bundle sensory module for signal transduction IRT44_RS03840 PF00672 HAMP domain IRT44_RS03860 PF03707 Bacterial signalling protein N terminal repeat IRT44_RS03860 PF00563 EAL domain IRT44_RS03860 PF00990 Diguanylate cyclase, GGDEF domain IRT44_RS03875 PF03527 RHS protein IRT44_RS03895 PF14220 Domain of unknown function (DUF4329) IRT44_RS03895 PF03527 RHS protein IRT44_RS03895 PF05593 RHS Repeat IRT44_RS03915 PF03527 RHS protein IRT44_RS03935 PF01695 IstB-like ATP binding protein IRT44_RS03940 PF00665 Integrase core domain IRT44_RS03940 PF02796 Helix-turn-helix domain of resolvase IRT44_RS03950 PF11553 Protein of unknown function (DUF3231) IRT44_RS03960 PF00395 S-layer homology domain IRT44_RS03970 PF09186 Domain of unknown function (DUF1949) IRT44_RS03970 PF01205 Uncharacterized protein family UPF0029 IRT44_RS03980 PF00395 S-layer homology domain IRT44_RS03985 PF00953 Glycosyl transferase family 4 IRT44_RS03990 PF03808 Glycosyl transferase WecB/TagA/CpsF family IRT44_RS03995 PF07977 FabA-like domain IRT44_RS04000 PF01066 CDP-alcohol phosphatidyltransferase IRT44_RS04010 PF00460 Flagella basal body rod protein IRT44_RS04010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_RS04015 PF07196 Flagellin hook IN motif IRT44_RS04015 PF00460 Flagella basal body rod protein IRT44_RS04020 PF00460 Flagella basal body rod protein IRT44_RS04020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_RS04030 PF12116 Stage III sporulation protein D IRT44_RS04035 PF01551 Peptidase family M23 IRT44_RS04040 PF08486 Stage II sporulation protein IRT44_RS04045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_RS04055 PF06612 Protein of unknown function (DUF1146) IRT44_RS04060 PF00361 Proton-conducting membrane transporter IRT44_RS04070 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IRT44_RS04070 PF00361 Proton-conducting membrane transporter IRT44_RS04070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IRT44_RS04075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IRT44_RS04080 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IRT44_RS04085 PF12838 4Fe-4S dicluster domain IRT44_RS04090 PF00146 NADH dehydrogenase IRT44_RS04095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IRT44_RS04100 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IRT44_RS04105 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IRT44_RS04110 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IRT44_RS04120 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IRT44_RS04120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IRT44_RS04125 PF02874 ATP synthase alpha/beta family, beta-barrel domain IRT44_RS04125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_RS04130 PF00231 ATP synthase IRT44_RS04135 PF02874 ATP synthase alpha/beta family, beta-barrel domain IRT44_RS04135 PF00306 ATP synthase alpha/beta chain, C terminal domain IRT44_RS04135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_RS04140 PF00213 ATP synthase delta (OSCP) subunit IRT44_RS04145 PF00430 ATP synthase B/B' CF(0) IRT44_RS04150 PF00137 ATP synthase subunit C IRT44_RS04155 PF00119 ATP synthase A chain IRT44_RS04170 PF00108 Thiolase, N-terminal domain IRT44_RS04170 PF02803 Thiolase, C-terminal domain IRT44_RS04180 PF00561 alpha/beta hydrolase fold IRT44_RS04190 PF04055 Radical SAM superfamily IRT44_RS04190 PF06968 Biotin and Thiamin Synthesis associated domain IRT44_RS04200 PF00202 Aminotransferase class-III IRT44_RS04205 PF00395 S-layer homology domain IRT44_RS04205 PF00963 Cohesin domain IRT44_RS04210 PF02350 UDP-N-acetylglucosamine 2-epimerase IRT44_RS04225 PF13333 Integrase core domain IRT44_RS04225 PF00665 Integrase core domain IRT44_RS04225 PF13276 HTH-like domain IRT44_RS04230 PF00464 Serine hydroxymethyltransferase IRT44_RS04235 PF04260 Protein of unknown function (DUF436) IRT44_RS04240 PF02502 Ribose/Galactose Isomerase IRT44_RS04245 PF01451 Low molecular weight phosphotyrosine protein phosphatase IRT44_RS04250 PF02659 Putative manganese efflux pump IRT44_RS04255 PF01300 Telomere recombination IRT44_RS04255 PF03481 Putative GTP-binding controlling metal-binding IRT44_RS04260 PF09551 Stage II sporulation protein R (spore_II_R) IRT44_RS04265 PF17827 PrmC N-terminal domain IRT44_RS04265 PF05175 Methyltransferase small domain IRT44_RS04270 PF03462 PCRF domain IRT44_RS04270 PF00472 RF-1 domain IRT44_RS04280 PF00265 Thymidine kinase IRT44_RS04285 PF01197 Ribosomal protein L31 IRT44_RS04295 PF01551 Peptidase family M23 IRT44_RS04300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_RS04300 PF07498 Rho termination factor, N-terminal domain IRT44_RS04300 PF07497 Rho termination factor, RNA-binding domain IRT44_RS04305 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IRT44_RS04310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_RS04315 PF00923 Transaldolase/Fructose-6-phosphate aldolase IRT44_RS04320 PF01116 Fructose-bisphosphate aldolase class-II IRT44_RS04325 PF00072 Response regulator receiver domain IRT44_RS04330 PF10997 Alternate to MurJ IRT44_RS04335 PF06418 CTP synthase N-terminus IRT44_RS04335 PF00117 Glutamine amidotransferase class-I IRT44_RS04340 PF05066 HB1, ASXL, restriction endonuclease HTH domain IRT44_RS04345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IRT44_RS04345 PF09125 Cytochrome C oxidase subunit II, transmembrane IRT44_RS04350 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_RS04355 PF02310 B12 binding domain IRT44_RS04355 PF01642 Methylmalonyl-CoA mutase IRT44_RS04360 PF08359 YsiA-like protein, C-terminal region IRT44_RS04360 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS04370 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_RS04370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_RS04370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_RS04375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_RS04375 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_RS04375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_RS04380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IRT44_RS04380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IRT44_RS04385 PF00108 Thiolase, N-terminal domain IRT44_RS04385 PF02803 Thiolase, C-terminal domain IRT44_RS04405 PF13183 4Fe-4S dicluster domain IRT44_RS04405 PF02754 Cysteine-rich domain IRT44_RS04410 PF12544 Lysine-2,3-aminomutase IRT44_RS04415 PF02954 Bacterial regulatory protein, Fis family IRT44_RS04415 PF00158 Sigma-54 interaction domain IRT44_RS04415 PF13426 PAS domain IRT44_RS04440 PF00491 Arginase family IRT44_RS04445 PF17284 Spermidine synthase tetramerisation domain IRT44_RS04450 PF00912 Transglycosylase IRT44_RS04450 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS04460 PF08741 YwhD family IRT44_RS04485 PF00085 Thioredoxin IRT44_RS04495 PF01966 HD domain IRT44_RS04500 PF00873 AcrB/AcrD/AcrF family IRT44_RS04530 PF01695 IstB-like ATP binding protein IRT44_RS04535 PF00665 Integrase core domain IRT44_RS04535 PF02796 Helix-turn-helix domain of resolvase IRT44_RS04545 PF01479 S4 domain IRT44_RS04545 PF00849 RNA pseudouridylate synthase IRT44_RS04560 PF02073 Thermophilic metalloprotease (M29) IRT44_RS04565 PF07690 Major Facilitator Superfamily IRT44_RS04585 PF02926 THUMP domain IRT44_RS04585 PF01170 Putative RNA methylase family UPF0020 IRT44_RS04595 PF04263 Thiamin pyrophosphokinase, catalytic domain IRT44_RS04595 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain IRT44_RS04600 PF03167 Uracil DNA glycosylase superfamily IRT44_RS04605 PF07690 Major Facilitator Superfamily IRT44_RS04610 PF02525 Flavodoxin-like fold IRT44_RS04620 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS04625 PF00749 tRNA synthetases class I (E and Q), catalytic domain IRT44_RS04625 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IRT44_RS04635 PF02743 Cache domain IRT44_RS04635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS04635 PF00672 HAMP domain IRT44_RS04640 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_RS04650 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS04655 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS04660 PF17912 MalK OB fold domain IRT44_RS04660 PF00005 ABC transporter IRT44_RS04665 PF13333 Integrase core domain IRT44_RS04665 PF00665 Integrase core domain IRT44_RS04665 PF13276 HTH-like domain IRT44_RS04675 PF01048 Phosphorylase superfamily IRT44_RS04680 PF00174 Oxidoreductase molybdopterin binding domain IRT44_RS04685 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS04690 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS04695 PF00005 ABC transporter IRT44_RS04700 PF02608 ABC transporter substrate-binding protein PnrA-like IRT44_RS04705 PF00672 HAMP domain IRT44_RS04705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS04725 PF01144 Coenzyme A transferase IRT44_RS04730 PF01144 Coenzyme A transferase IRT44_RS04735 PF00248 Aldo/keto reductase family IRT44_RS04740 PF00296 Luciferase-like monooxygenase IRT44_RS04745 PF07690 Major Facilitator Superfamily IRT44_RS04750 PF01638 HxlR-like helix-turn-helix IRT44_RS04755 PF02954 Bacterial regulatory protein, Fis family IRT44_RS04755 PF00989 PAS fold IRT44_RS04755 PF00158 Sigma-54 interaction domain IRT44_RS04770 PF00005 ABC transporter IRT44_RS04785 PF01235 Sodium:alanine symporter family IRT44_RS04790 PF00381 PTS HPr component phosphorylation site IRT44_RS04795 PF05524 PEP-utilising enzyme, N-terminal IRT44_RS04795 PF00391 PEP-utilising enzyme, mobile domain IRT44_RS04795 PF02896 PEP-utilising enzyme, TIM barrel domain IRT44_RS04800 PF01232 Mannitol dehydrogenase Rossmann domain IRT44_RS04800 PF08125 Mannitol dehydrogenase C-terminal domain IRT44_RS04805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_RS04810 PF05043 Mga helix-turn-helix domain IRT44_RS04810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_RS04810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_RS04810 PF08279 HTH domain IRT44_RS04810 PF00874 PRD domain IRT44_RS04815 PF02378 Phosphotransferase system, EIIC IRT44_RS04815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_RS04820 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_RS04825 PF00398 Ribosomal RNA adenine dimethylase IRT44_RS04830 PF08241 Methyltransferase domain IRT44_RS04835 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_RS04845 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS04845 PF00072 Response regulator receiver domain IRT44_RS04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS04850 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS04850 PF00989 PAS fold IRT44_RS04850 PF00672 HAMP domain IRT44_RS04855 PF10415 Fumarase C C-terminus IRT44_RS04855 PF00206 Lyase IRT44_RS04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS04860 PF18698 Histidine kinase sensor domain IRT44_RS04860 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS04860 PF00989 PAS fold IRT44_RS04860 PF00672 HAMP domain IRT44_RS04870 PF00501 AMP-binding enzyme IRT44_RS04870 PF01553 Acyltransferase IRT44_RS04875 PF07690 Major Facilitator Superfamily IRT44_RS04880 PF01554 MatE IRT44_RS04885 PF08141 Small acid-soluble spore protein H family IRT44_RS04890 PF00664 ABC transporter transmembrane region IRT44_RS04890 PF00005 ABC transporter IRT44_RS04895 PF00664 ABC transporter transmembrane region IRT44_RS04895 PF00005 ABC transporter IRT44_RS04900 PF00005 ABC transporter IRT44_RS04905 PF01032 FecCD transport family IRT44_RS04910 PF01032 FecCD transport family IRT44_RS04925 PF03611 PTS system sugar-specific permease component IRT44_RS04930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_RS04935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_RS04940 PF06039 Malate:quinone oxidoreductase (Mqo) IRT44_RS04965 PF07690 Major Facilitator Superfamily IRT44_RS04970 PF07690 Major Facilitator Superfamily IRT44_RS04975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IRT44_RS04975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_RS04980 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS05015 PF02796 Helix-turn-helix domain of resolvase IRT44_RS05015 PF00665 Integrase core domain IRT44_RS05020 PF01695 IstB-like ATP binding protein IRT44_RS05035 PF08279 HTH domain IRT44_RS05035 PF13280 WYL domain IRT44_RS05045 PF08281 Sigma-70, region 4 IRT44_RS05045 PF12680 SnoaL-like domain IRT44_RS05045 PF04542 Sigma-70 region 2 IRT44_RS05050 PF02590 Predicted SPOUT methyltransferase IRT44_RS05060 PF13091 PLD-like domain IRT44_RS05060 PF13396 Phospholipase_D-nuclease N-terminal IRT44_RS05065 PF13180 PDZ domain IRT44_RS05075 PF00753 Metallo-beta-lactamase superfamily IRT44_RS05080 PF09648 YycH protein IRT44_RS05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS05090 PF00672 HAMP domain IRT44_RS05090 PF13426 PAS domain IRT44_RS05090 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS05095 PF00072 Response regulator receiver domain IRT44_RS05095 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS05100 PF01551 Peptidase family M23 IRT44_RS05100 PF10145 Phage-related minor tail protein IRT44_RS05100 PF01464 Transglycosylase SLT domain IRT44_RS05115 PF00709 Adenylosuccinate synthetase IRT44_RS05125 PF01281 Ribosomal protein L9, N-terminal domain IRT44_RS05125 PF03948 Ribosomal protein L9, C-terminal domain IRT44_RS05130 PF02272 DHHA1 domain IRT44_RS05130 PF01368 DHH family IRT44_RS05140 PF01084 Ribosomal protein S18 IRT44_RS05145 PF00436 Single-strand binding protein family IRT44_RS05150 PF01250 Ribosomal protein S6 IRT44_RS05155 PF01926 50S ribosome-binding GTPase IRT44_RS05155 PF06071 Protein of unknown function (DUF933) IRT44_RS05160 PF01432 Peptidase family M3 IRT44_RS05160 PF08439 Oligopeptidase F IRT44_RS05170 PF06107 Bacterial protein of unknown function (DUF951) IRT44_RS05175 PF00924 Mechanosensitive ion channel IRT44_RS05185 PF06866 Protein of unknown function (DUF1256) IRT44_RS05190 PF00781 Diacylglycerol kinase catalytic domain IRT44_RS05195 PF01022 Bacterial regulatory protein, arsR family IRT44_RS05200 PF00892 EamA-like transporter family IRT44_RS05210 PF03358 NADPH-dependent FMN reductase IRT44_RS05220 PF04474 Protein of unknown function (DUF554) IRT44_RS05225 PF00266 Aminotransferase class-V IRT44_RS05230 PF17762 HTH domain found in ParB protein IRT44_RS05230 PF02195 ParB-like nuclease domain IRT44_RS05235 PF13614 AAA domain IRT44_RS05240 PF02195 ParB-like nuclease domain IRT44_RS05240 PF17762 HTH domain found in ParB protein IRT44_RS05245 PF02308 MgtC family IRT44_RS05250 PF02527 rRNA small subunit methyltransferase G IRT44_RS05255 PF01134 Glucose inhibited division protein A IRT44_RS05255 PF13932 GidA associated domain IRT44_RS05260 PF01926 50S ribosome-binding GTPase IRT44_RS05260 PF12631 MnmE helical domain IRT44_RS05260 PF10396 GTP-binding protein TrmE N-terminus IRT44_RS05270 PF14804 Jag N-terminus IRT44_RS05270 PF01424 R3H domain IRT44_RS05275 PF02096 60Kd inner membrane protein IRT44_RS05280 PF01809 Putative membrane protein insertion efficiency factor IRT44_RS05285 PF00825 Ribonuclease P IRT44_RS05290 PF00468 Ribosomal protein L34 IRT44_RS05300 PF00712 DNA polymerase III beta subunit, N-terminal domain IRT44_RS05300 PF02768 DNA polymerase III beta subunit, C-terminal domain IRT44_RS05300 PF02767 DNA polymerase III beta subunit, central domain IRT44_RS05310 PF02463 RecF/RecN/SMC N terminal domain IRT44_RS05315 PF04025 Domain of unknown function (DUF370) IRT44_RS05320 PF00204 DNA gyrase B IRT44_RS05320 PF00986 DNA gyrase B subunit, carboxyl terminus IRT44_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS05320 PF01751 Toprim domain IRT44_RS05325 PF07690 Major Facilitator Superfamily IRT44_RS05335 PF03989 DNA gyrase C-terminal domain, beta-propeller IRT44_RS05335 PF00521 DNA gyrase/topoisomerase IV, subunit A IRT44_RS05340 PF00072 Response regulator receiver domain IRT44_RS05360 PF14175 YaaC-like Protein IRT44_RS05365 PF00478 IMP dehydrogenase / GMP reductase domain IRT44_RS05365 PF00571 CBS domain IRT44_RS05375 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_RS05375 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_RS05380 PF01680 SOR/SNZ family IRT44_RS05385 PF01174 SNO glutamine amidotransferase family IRT44_RS05390 PF02403 Seryl-tRNA synthetase N-terminal domain IRT44_RS05390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_RS05400 PF01274 Malate synthase IRT44_RS05405 PF00463 Isocitrate lyase family IRT44_RS05440 PF01522 Polysaccharide deacetylase IRT44_RS05450 PF01638 HxlR-like helix-turn-helix IRT44_RS05480 PF02378 Phosphotransferase system, EIIC IRT44_RS05480 PF00367 phosphotransferase system, EIIB IRT44_RS05485 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IRT44_RS05490 PF00874 PRD domain IRT44_RS05490 PF03123 CAT RNA binding domain IRT44_RS05500 PF05163 DinB family IRT44_RS05505 PF00881 Nitroreductase family IRT44_RS05510 PF14437 MafB19-like deaminase IRT44_RS05515 PF01479 S4 domain IRT44_RS05515 PF00849 RNA pseudouridylate synthase IRT44_RS05535 PF00970 Oxidoreductase FAD-binding domain IRT44_RS05535 PF00042 Globin IRT44_RS05535 PF00175 Oxidoreductase NAD-binding domain IRT44_RS05540 PF01966 HD domain IRT44_RS05550 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS05550 PF00989 PAS fold IRT44_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS05560 PF02575 YbaB/EbfC DNA-binding family IRT44_RS05565 PF13662 Toprim domain IRT44_RS05565 PF02132 RecR protein IRT44_RS05580 PF07441 SigmaK-factor processing regulatory protein BofA IRT44_RS05600 PF01276 Orn/Lys/Arg decarboxylase, major domain IRT44_RS05600 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IRT44_RS05605 PF02223 Thymidylate kinase IRT44_RS05610 PF06153 Cyclic-di-AMP receptor IRT44_RS05615 PF03885 Protein of unknown function (DUF327) IRT44_RS05620 PF09115 DNA polymerase III, delta subunit, C terminal IRT44_RS05625 PF04468 PSP1 C-terminal conserved region IRT44_RS05630 PF06156 Initiation control protein YabA IRT44_RS05635 PF05175 Methyltransferase small domain IRT44_RS05640 PF01541 GIY-YIG catalytic domain IRT44_RS05645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS05650 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IRT44_RS05650 PF18277 AbrB C-terminal domain IRT44_RS05655 PF08264 Anticodon-binding domain of tRNA IRT44_RS05655 PF01588 Putative tRNA binding domain IRT44_RS05655 PF09334 tRNA synthetases class I (M) IRT44_RS05660 PF01026 TatD related DNase IRT44_RS05670 PF06725 3D domain IRT44_RS05670 PF03990 G5-linked-Ubiquitin-like domain IRT44_RS05670 PF07501 G5 domain IRT44_RS05675 PF13331 Domain of unknown function (DUF4093) IRT44_RS05675 PF13662 Toprim domain IRT44_RS05680 PF00398 Ribosomal RNA adenine dimethylase IRT44_RS05685 PF06257 Biofilm formation stimulator VEG IRT44_RS05690 PF00269 Small, acid-soluble spore proteins, alpha/beta type IRT44_RS05700 PF00288 GHMP kinases N terminal domain IRT44_RS05700 PF08544 GHMP kinases C terminal IRT44_RS05705 PF00156 Phosphoribosyl transferase domain IRT44_RS05705 PF09182 Bacterial purine repressor, N-terminal IRT44_RS05710 PF01042 Endoribonuclease L-PSP IRT44_RS05715 PF04026 SpoVG IRT44_RS05720 PF02492 CobW/HypB/UreG, nucleotide-binding domain IRT44_RS05720 PF07683 Cobalamin synthesis protein cobW C-terminal domain IRT44_RS05725 PF12804 MobA-like NTP transferase domain IRT44_RS05725 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_RS05730 PF14572 Phosphoribosyl synthetase-associated domain IRT44_RS05730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IRT44_RS05735 PF01386 Ribosomal L25p family IRT44_RS05735 PF14693 Ribosomal protein TL5, C-terminal domain IRT44_RS05740 PF01195 Peptidyl-tRNA hydrolase IRT44_RS05750 PF00270 DEAD/DEAH box helicase IRT44_RS05750 PF02559 CarD-like/TRCF domain IRT44_RS05750 PF03461 TRCF domain IRT44_RS05750 PF17757 UvrB interaction domain IRT44_RS05750 PF00271 Helicase conserved C-terminal domain IRT44_RS05755 PF05698 Bacterial trigger factor protein (TF) C-terminus IRT44_RS05760 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IRT44_RS05760 PF15714 Stage V sporulation protein T C-terminal, transcription factor IRT44_RS05765 PF01943 Polysaccharide biosynthesis protein IRT44_RS05765 PF14667 Polysaccharide biosynthesis C-terminal domain IRT44_RS05770 PF03819 MazG nucleotide pyrophosphohydrolase domain IRT44_RS05770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS05775 PF01479 S4 domain IRT44_RS05790 PF07873 YabP family IRT44_RS05805 PF00575 S1 RNA binding domain IRT44_RS05810 PF07228 Stage II sporulation protein E (SpoIIE) IRT44_RS05815 PF00092 von Willebrand factor type A domain IRT44_RS05820 PF00069 Protein kinase domain IRT44_RS05830 PF06738 Putative threonine/serine exporter IRT44_RS05830 PF12821 Threonine/Serine exporter, ThrE IRT44_RS05835 PF01171 PP-loop family IRT44_RS05835 PF09179 TilS substrate binding domain IRT44_RS05835 PF11734 TilS substrate C-terminal domain IRT44_RS05840 PF00156 Phosphoribosyl transferase domain IRT44_RS05845 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS05845 PF06480 FtsH Extracellular IRT44_RS05845 PF01434 Peptidase family M41 IRT44_RS05845 PF17862 AAA+ lid domain IRT44_RS05865 PF02445 Quinolinate synthetase A protein IRT44_RS05875 PF01297 Zinc-uptake complex component A periplasmic IRT44_RS05880 PF00005 ABC transporter IRT44_RS05885 PF00950 ABC 3 transport family IRT44_RS05890 PF01475 Ferric uptake regulator family IRT44_RS05895 PF02910 Fumarate reductase flavoprotein C-term IRT44_RS05895 PF00890 FAD binding domain IRT44_RS05900 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IRT44_RS05900 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IRT44_RS05905 PF03309 Type III pantothenate kinase IRT44_RS05935 PF01343 Peptidase family S49 IRT44_RS05955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_RS05960 PF00437 Type II/IV secretion system protein IRT44_RS06070 PF03979 Sigma-70 factor, region 1.1 IRT44_RS06070 PF04542 Sigma-70 region 2 IRT44_RS06070 PF00140 Sigma-70 factor, region 1.2 IRT44_RS06070 PF04539 Sigma-70 region 3 IRT44_RS06070 PF04545 Sigma-70, region 4 IRT44_RS06075 PF01430 Hsp33 protein IRT44_RS06080 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_RS06090 PF00117 Glutamine amidotransferase class-I IRT44_RS06100 PF02416 mttA/Hcf106 family IRT44_RS06105 PF01063 Amino-transferase class IV IRT44_RS06110 PF00809 Pterin binding enzyme IRT44_RS06115 PF02152 Dihydroneopterin aldolase IRT44_RS06120 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IRT44_RS06125 PF01381 Helix-turn-helix IRT44_RS06125 PF08671 Anti-repressor SinI IRT44_RS06130 PF01207 Dihydrouridine synthase (Dus) IRT44_RS06135 PF01272 Transcription elongation factor, GreA/GreB, C-term IRT44_RS06135 PF03449 Transcription elongation factor, N-terminal IRT44_RS06140 PF00152 tRNA synthetases class II (D, K and N) IRT44_RS06140 PF01336 OB-fold nucleic acid binding domain IRT44_RS06170 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase IRT44_RS06170 PF04101 Glycosyltransferase family 28 C-terminal domain IRT44_RS06175 PF13419 Haloacid dehalogenase-like hydrolase IRT44_RS06180 PF17727 CtsR C-terminal dimerization domain IRT44_RS06180 PF05848 CtsR N-terminal HTH domain IRT44_RS06185 PF02151 UvrB/uvrC motif IRT44_RS06190 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain IRT44_RS06195 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS06195 PF07724 AAA domain (Cdc48 subfamily) IRT44_RS06195 PF17871 AAA lid domain IRT44_RS06195 PF02861 Clp amino terminal domain, pathogenicity island component IRT44_RS06195 PF10431 C-terminal, D2-small domain, of ClpB protein IRT44_RS06200 PF18073 Rubredoxin metal binding domain IRT44_RS06210 PF01066 CDP-alcohol phosphatidyltransferase IRT44_RS06225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IRT44_RS06230 PF02542 YgbB family IRT44_RS06235 PF00749 tRNA synthetases class I (E and Q), catalytic domain IRT44_RS06240 PF06426 Serine acetyltransferase, N-terminal IRT44_RS06240 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_RS06245 PF01406 tRNA synthetases class I (C) catalytic domain IRT44_RS06245 PF09190 DALR domain IRT44_RS06250 PF00636 Ribonuclease III domain IRT44_RS06255 PF00588 SpoU rRNA Methylase family IRT44_RS06255 PF08032 RNA 2'-O ribose methyltransferase substrate binding IRT44_RS06260 PF05991 YacP-like NYN domain IRT44_RS06265 PF04542 Sigma-70 region 2 IRT44_RS06265 PF08281 Sigma-70, region 4 IRT44_RS06270 PF00471 Ribosomal protein L33 IRT44_RS06275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IRT44_RS06280 PF00467 KOW motif IRT44_RS06280 PF02357 Transcription termination factor nusG IRT44_RS06285 PF03946 Ribosomal protein L11, N-terminal domain IRT44_RS06285 PF00298 Ribosomal protein L11, RNA binding domain IRT44_RS06290 PF00687 Ribosomal protein L1p/L10e family IRT44_RS06295 PF00466 Ribosomal protein L10 IRT44_RS06300 PF16320 Ribosomal protein L7/L12 dimerisation domain IRT44_RS06300 PF00542 Ribosomal protein L7/L12 C-terminal domain IRT44_RS06305 PF05175 Methyltransferase small domain IRT44_RS06310 PF00562 RNA polymerase Rpb2, domain 6 IRT44_RS06310 PF10385 RNA polymerase beta subunit external 1 domain IRT44_RS06310 PF04565 RNA polymerase Rpb2, domain 3 IRT44_RS06310 PF04561 RNA polymerase Rpb2, domain 2 IRT44_RS06310 PF04560 RNA polymerase Rpb2, domain 7 IRT44_RS06310 PF04563 RNA polymerase beta subunit IRT44_RS06315 PF04997 RNA polymerase Rpb1, domain 1 IRT44_RS06315 PF05000 RNA polymerase Rpb1, domain 4 IRT44_RS06315 PF04998 RNA polymerase Rpb1, domain 5 IRT44_RS06315 PF04983 RNA polymerase Rpb1, domain 3 IRT44_RS06315 PF00623 RNA polymerase Rpb1, domain 2 IRT44_RS06320 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family IRT44_RS06325 PF00164 Ribosomal protein S12/S23 IRT44_RS06330 PF00177 Ribosomal protein S7p/S5e IRT44_RS06335 PF00679 Elongation factor G C-terminus IRT44_RS06335 PF03144 Elongation factor Tu domain 2 IRT44_RS06335 PF00009 Elongation factor Tu GTP binding domain IRT44_RS06335 PF14492 Elongation Factor G, domain II IRT44_RS06335 PF03764 Elongation factor G, domain IV IRT44_RS06340 PF03143 Elongation factor Tu C-terminal domain IRT44_RS06340 PF03144 Elongation factor Tu domain 2 IRT44_RS06340 PF00009 Elongation factor Tu GTP binding domain IRT44_RS06355 PF00338 Ribosomal protein S10p/S20e IRT44_RS06360 PF00297 Ribosomal protein L3 IRT44_RS06365 PF00573 Ribosomal protein L4/L1 family IRT44_RS06370 PF00276 Ribosomal protein L23 IRT44_RS06375 PF03947 Ribosomal Proteins L2, C-terminal domain IRT44_RS06375 PF00181 Ribosomal Proteins L2, RNA binding domain IRT44_RS06380 PF00203 Ribosomal protein S19 IRT44_RS06385 PF00237 Ribosomal protein L22p/L17e IRT44_RS06390 PF00189 Ribosomal protein S3, C-terminal domain IRT44_RS06390 PF07650 KH domain IRT44_RS06395 PF00252 Ribosomal protein L16p/L10e IRT44_RS06400 PF00831 Ribosomal L29 protein IRT44_RS06405 PF00366 Ribosomal protein S17 IRT44_RS06410 PF00238 Ribosomal protein L14p/L23e IRT44_RS06415 PF00467 KOW motif IRT44_RS06415 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IRT44_RS06420 PF00673 ribosomal L5P family C-terminus IRT44_RS06420 PF00281 Ribosomal protein L5 IRT44_RS06425 PF00253 Ribosomal protein S14p/S29e IRT44_RS06430 PF00410 Ribosomal protein S8 IRT44_RS06435 PF00347 Ribosomal protein L6 IRT44_RS06440 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IRT44_RS06445 PF00333 Ribosomal protein S5, N-terminal domain IRT44_RS06445 PF03719 Ribosomal protein S5, C-terminal domain IRT44_RS06450 PF00327 Ribosomal protein L30p/L7e IRT44_RS06455 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IRT44_RS06460 PF00344 SecY translocase IRT44_RS06465 PF05191 Adenylate kinase, active site lid IRT44_RS06470 PF00557 Metallopeptidase family M24 IRT44_RS06475 PF01176 Translation initiation factor 1A / IF-1 IRT44_RS06480 PF00444 Ribosomal protein L36 IRT44_RS06485 PF00416 Ribosomal protein S13/S18 IRT44_RS06490 PF00411 Ribosomal protein S11 IRT44_RS06495 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IRT44_RS06495 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IRT44_RS06495 PF01000 RNA polymerase Rpb3/RpoA insert domain IRT44_RS06500 PF01196 Ribosomal protein L17 IRT44_RS06505 PF00005 ABC transporter IRT44_RS06510 PF00005 ABC transporter IRT44_RS06515 PF02361 Cobalt transport protein IRT44_RS06520 PF01416 tRNA pseudouridine synthase IRT44_RS06525 PF00572 Ribosomal protein L13 IRT44_RS06530 PF00380 Ribosomal protein S9/S16 IRT44_RS06535 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_RS06540 PF10609 NUBPL iron-transfer P-loop NTPase IRT44_RS06555 PF01522 Polysaccharide deacetylase IRT44_RS06645 PF00491 Arginase family IRT44_RS06655 PF04542 Sigma-70 region 2 IRT44_RS06655 PF08281 Sigma-70, region 4 IRT44_RS06660 PF13490 Putative zinc-finger IRT44_RS06665 PF02457 DisA bacterial checkpoint controller nucleotide-binding IRT44_RS06675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_RS06675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_RS06675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_RS06675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_RS06680 PF01380 SIS domain IRT44_RS06685 PF11208 Protein of unknown function (DUF2992) IRT44_RS06695 PF01695 IstB-like ATP binding protein IRT44_RS06700 PF02796 Helix-turn-helix domain of resolvase IRT44_RS06700 PF00665 Integrase core domain IRT44_RS06710 PF08240 Alcohol dehydrogenase GroES-like domain IRT44_RS06710 PF00107 Zinc-binding dehydrogenase IRT44_RS06715 PF01638 HxlR-like helix-turn-helix IRT44_RS06720 PF04127 DNA / pantothenate metabolism flavoprotein IRT44_RS06720 PF02441 Flavoprotein IRT44_RS06730 PF01032 FecCD transport family IRT44_RS06735 PF01032 FecCD transport family IRT44_RS06740 PF00005 ABC transporter IRT44_RS06750 PF01872 RibD C-terminal domain IRT44_RS06755 PF07690 Major Facilitator Superfamily IRT44_RS06765 PF03466 LysR substrate binding domain IRT44_RS06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS06770 PF16916 Dimerisation domain of Zinc Transporter IRT44_RS06770 PF01545 Cation efflux family IRT44_RS06800 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS06800 PF00072 Response regulator receiver domain IRT44_RS06805 PF00672 HAMP domain IRT44_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS06805 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS06820 PF04397 LytTr DNA-binding domain IRT44_RS06820 PF00072 Response regulator receiver domain IRT44_RS06825 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IRT44_RS06825 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IRT44_RS06835 PF02678 Pirin IRT44_RS06835 PF17954 Quercetinase C-terminal cupin domain IRT44_RS06840 PF07681 DoxX IRT44_RS06845 PF02525 Flavodoxin-like fold IRT44_RS06850 PF01047 MarR family IRT44_RS06860 PF00294 pfkB family carbohydrate kinase IRT44_RS06865 PF04227 Indigoidine synthase A like protein IRT44_RS06870 PF00403 Heavy-metal-associated domain IRT44_RS06880 PF00403 Heavy-metal-associated domain IRT44_RS06895 PF00072 Response regulator receiver domain IRT44_RS06895 PF12833 Helix-turn-helix domain IRT44_RS06900 PF06580 Histidine kinase IRT44_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS06900 PF00672 HAMP domain IRT44_RS06900 PF02743 Cache domain IRT44_RS06910 PF07702 UTRA domain IRT44_RS06910 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS06915 PF02378 Phosphotransferase system, EIIC IRT44_RS06915 PF00367 phosphotransferase system, EIIB IRT44_RS06920 PF16657 Maltogenic Amylase, C-terminal domain IRT44_RS06920 PF00128 Alpha amylase, catalytic domain IRT44_RS06930 PF13407 Periplasmic binding protein domain IRT44_RS06935 PF00005 ABC transporter IRT44_RS06945 PF02659 Putative manganese efflux pump IRT44_RS06950 PF00690 Cation transporter/ATPase, N-terminus IRT44_RS06950 PF00689 Cation transporting ATPase, C-terminus IRT44_RS06955 PF09560 Sporulation protein YunB (Spo_YunB) IRT44_RS06960 PF07833 Copper amine oxidase N-terminal domain IRT44_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS06975 PF07730 Histidine kinase IRT44_RS06980 PF00196 Bacterial regulatory proteins, luxR family IRT44_RS06980 PF00072 Response regulator receiver domain IRT44_RS06990 PF09125 Cytochrome C oxidase subunit II, transmembrane IRT44_RS06990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IRT44_RS06995 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_RS07005 PF00881 Nitroreductase family IRT44_RS07010 PF16736 Single Cache-like IRT44_RS07010 PF00989 PAS fold IRT44_RS07010 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS07015 PF00072 Response regulator receiver domain IRT44_RS07015 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS07030 PF02447 GntP family permease IRT44_RS07035 PF02595 Glycerate kinase family IRT44_RS07040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS07040 PF00672 HAMP domain IRT44_RS07040 PF02743 Cache domain IRT44_RS07050 PF05651 Putative sugar diacid recognition IRT44_RS07050 PF17853 GGDEF-like domain IRT44_RS07050 PF13556 PucR C-terminal helix-turn-helix domain IRT44_RS07055 PF00471 Ribosomal protein L33 IRT44_RS07060 PF00999 Sodium/hydrogen exchanger family IRT44_RS07065 PF07827 KNTase C-terminal domain IRT44_RS07085 PF01037 Lrp/AsnC ligand binding domain IRT44_RS07090 PF12706 Beta-lactamase superfamily domain IRT44_RS07095 PF00082 Subtilase family IRT44_RS07110 PF00574 Clp protease IRT44_RS07145 PF03466 LysR substrate binding domain IRT44_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS07150 PF00285 Citrate synthase, C-terminal domain IRT44_RS07155 PF00455 DeoR C terminal sensor domain IRT44_RS07155 PF08220 DeoR-like helix-turn-helix domain IRT44_RS07160 PF00294 pfkB family carbohydrate kinase IRT44_RS07165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_RS07165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_RS07170 PF00381 PTS HPr component phosphorylation site IRT44_RS07185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IRT44_RS07195 PF10055 Uncharacterized small protein (DUF2292) IRT44_RS07220 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_RS07220 PF17863 AAA lid domain IRT44_RS07230 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_RS07235 PF00581 Rhodanese-like domain IRT44_RS07235 PF01206 Sulfurtransferase TusA IRT44_RS07240 PF02630 SCO1/SenC IRT44_RS07250 PF17770 Ribonuclease J C-terminal domain IRT44_RS07250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IRT44_RS07250 PF00753 Metallo-beta-lactamase superfamily IRT44_RS07255 PF06491 Disulphide isomerase IRT44_RS07260 PF00248 Aldo/keto reductase family IRT44_RS07265 PF00891 O-methyltransferase domain IRT44_RS07270 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_RS07275 PF09383 NIL domain IRT44_RS07275 PF00005 ABC transporter IRT44_RS07280 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07285 PF03180 NLPA lipoprotein IRT44_RS07290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS07305 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_RS07305 PF08239 Bacterial SH3 domain IRT44_RS07315 PF12849 PBP superfamily domain IRT44_RS07320 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07330 PF00005 ABC transporter IRT44_RS07335 PF00005 ABC transporter IRT44_RS07340 PF02040 Arsenical pump membrane protein IRT44_RS07355 PF05199 GMC oxidoreductase IRT44_RS07355 PF00732 GMC oxidoreductase IRT44_RS07360 PF01022 Bacterial regulatory protein, arsR family IRT44_RS07375 PF01648 4'-phosphopantetheinyl transferase superfamily IRT44_RS07390 PF00842 Alanine racemase, C-terminal domain IRT44_RS07390 PF01168 Alanine racemase, N-terminal domain IRT44_RS07395 PF01402 Ribbon-helix-helix protein, copG family IRT44_RS07400 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IRT44_RS07405 PF13581 Histidine kinase-like ATPase domain IRT44_RS07410 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain IRT44_RS07410 PF07228 Stage II sporulation protein E (SpoIIE) IRT44_RS07415 PF01740 STAS domain IRT44_RS07420 PF13581 Histidine kinase-like ATPase domain IRT44_RS07425 PF04542 Sigma-70 region 2 IRT44_RS07425 PF04545 Sigma-70, region 4 IRT44_RS07425 PF04539 Sigma-70 region 3 IRT44_RS07430 PF17674 HHH domain IRT44_RS07430 PF16921 Tex protein YqgF-like domain IRT44_RS07430 PF09371 Tex-like protein N-terminal domain IRT44_RS07430 PF00575 S1 RNA binding domain IRT44_RS07445 PF10263 SprT-like family IRT44_RS07445 PF17283 SprT-like zinc ribbon domain IRT44_RS07450 PF00586 AIR synthase related protein, N-terminal domain IRT44_RS07450 PF02769 AIR synthase related protein, C-terminal domain IRT44_RS07455 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IRT44_RS07460 PF00814 Glycoprotease family IRT44_RS07465 PF00583 Acetyltransferase (GNAT) family IRT44_RS07470 PF00814 Glycoprotease family IRT44_RS07480 PF16326 ABC transporter C-terminal domain IRT44_RS07480 PF12848 ABC transporter IRT44_RS07480 PF00005 ABC transporter IRT44_RS07485 PF01812 5-formyltetrahydrofolate cyclo-ligase family IRT44_RS07490 PF00994 Probable molybdopterin binding domain IRT44_RS07490 PF01967 MoaC family IRT44_RS07495 PF02464 Competence-damaged protein IRT44_RS07495 PF00994 Probable molybdopterin binding domain IRT44_RS07505 PF00902 Sec-independent protein translocase protein (TatC) IRT44_RS07515 PF13276 HTH-like domain IRT44_RS07515 PF13333 Integrase core domain IRT44_RS07515 PF00665 Integrase core domain IRT44_RS07525 PF00188 Cysteine-rich secretory protein family IRT44_RS07530 PF00166 Chaperonin 10 Kd subunit IRT44_RS07535 PF00118 TCP-1/cpn60 chaperonin family IRT44_RS07540 PF13416 Bacterial extracellular solute-binding protein IRT44_RS07545 PF14785 Maltose transport system permease protein MalF P2 domain IRT44_RS07545 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07685 PF17863 AAA lid domain IRT44_RS07685 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_RS07695 PF01841 Transglutaminase-like superfamily IRT44_RS07695 PF13559 Domain of unknown function (DUF4129) IRT44_RS07695 PF11992 Domain of unknown function (DUF3488) IRT44_RS07700 PF02540 NAD synthase IRT44_RS07700 PF00117 Glutamine amidotransferase class-I IRT44_RS07700 PF00958 GMP synthase C terminal domain IRT44_RS07705 PF00860 Permease family IRT44_RS07710 PF00731 AIR carboxylase IRT44_RS07715 PF02222 ATP-grasp domain IRT44_RS07715 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IRT44_RS07720 PF10397 Adenylosuccinate lyase C-terminus IRT44_RS07720 PF00206 Lyase IRT44_RS07730 PF00665 Integrase core domain IRT44_RS07730 PF13333 Integrase core domain IRT44_RS07730 PF13276 HTH-like domain IRT44_RS07735 PF01695 IstB-like ATP binding protein IRT44_RS07750 PF00005 ABC transporter IRT44_RS07755 PF00005 ABC transporter IRT44_RS07760 PF07291 Methylamine utilisation protein MauE IRT44_RS07770 PF00005 ABC transporter IRT44_RS07785 PF00072 Response regulator receiver domain IRT44_RS07785 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS07795 PF00005 ABC transporter IRT44_RS07800 PF02687 FtsX-like permease family IRT44_RS07810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS07815 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07820 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS07825 PF00005 ABC transporter IRT44_RS07825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS07830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS07830 PF00005 ABC transporter IRT44_RS07835 PF02417 Chromate transporter IRT44_RS07840 PF02417 Chromate transporter IRT44_RS07850 PF01478 Type IV leader peptidase family IRT44_RS07850 PF06750 Bacterial Peptidase A24 N-terminal domain IRT44_RS07860 PF00072 Response regulator receiver domain IRT44_RS07860 PF00158 Sigma-54 interaction domain IRT44_RS07860 PF02954 Bacterial regulatory protein, Fis family IRT44_RS07865 PF00437 Type II/IV secretion system protein IRT44_RS07870 PF00482 Type II secretion system (T2SS), protein F IRT44_RS07885 PF00092 von Willebrand factor type A domain IRT44_RS07890 PF00092 von Willebrand factor type A domain IRT44_RS07895 PF00092 von Willebrand factor type A domain IRT44_RS07920 PF00092 von Willebrand factor type A domain IRT44_RS07935 PF00092 von Willebrand factor type A domain IRT44_RS07945 PF02073 Thermophilic metalloprotease (M29) IRT44_RS07950 PF00465 Iron-containing alcohol dehydrogenase IRT44_RS07960 PF01259 SAICAR synthetase IRT44_RS07965 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase IRT44_RS07975 PF02769 AIR synthase related protein, C-terminal domain IRT44_RS07975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IRT44_RS07975 PF00586 AIR synthase related protein, N-terminal domain IRT44_RS07980 PF00156 Phosphoribosyl transferase domain IRT44_RS07985 PF02769 AIR synthase related protein, C-terminal domain IRT44_RS07985 PF00586 AIR synthase related protein, N-terminal domain IRT44_RS07990 PF00551 Formyl transferase IRT44_RS08005 PF02142 MGS-like domain IRT44_RS08005 PF01808 AICARFT/IMPCHase bienzyme IRT44_RS08010 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IRT44_RS08010 PF02844 Phosphoribosylglycinamide synthetase, N domain IRT44_RS08010 PF02843 Phosphoribosylglycinamide synthetase, C domain IRT44_RS08025 PF13382 Adenine deaminase C-terminal domain IRT44_RS08025 PF01979 Amidohydrolase family IRT44_RS08030 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS08035 PF11862 Domain of unknown function (DUF3382) IRT44_RS08035 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS08040 PF12399 Branched-chain amino acid ATP-binding cassette transporter IRT44_RS08040 PF00005 ABC transporter IRT44_RS08045 PF00005 ABC transporter IRT44_RS08065 PF07690 Major Facilitator Superfamily IRT44_RS08070 PF13411 MerR HTH family regulatory protein IRT44_RS08075 PF01614 Bacterial transcriptional regulator IRT44_RS08075 PF09339 IclR helix-turn-helix domain IRT44_RS08085 PF00005 ABC transporter IRT44_RS08085 PF08402 TOBE domain IRT44_RS08090 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS08100 PF07687 Peptidase dimerisation domain IRT44_RS08100 PF01546 Peptidase family M20/M25/M40 IRT44_RS08105 PF13458 Periplasmic binding protein IRT44_RS08110 PF00672 HAMP domain IRT44_RS08110 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS08115 PF00072 Response regulator receiver domain IRT44_RS08115 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS08120 PF11258 Protein of unknown function (DUF3048) N-terminal domain IRT44_RS08120 PF17479 Protein of unknown function (DUF3048) C-terminal domain IRT44_RS08125 PF01371 Trp repressor protein IRT44_RS08130 PF01884 PcrB family IRT44_RS08140 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_RS08150 PF13361 UvrD-like helicase C-terminal domain IRT44_RS08150 PF00580 UvrD/REP helicase N-terminal domain IRT44_RS08155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IRT44_RS08155 PF12826 Helix-hairpin-helix motif IRT44_RS08155 PF03120 NAD-dependent DNA ligase OB-fold domain IRT44_RS08155 PF01653 NAD-dependent DNA ligase adenylation domain IRT44_RS08155 PF00533 BRCA1 C Terminus (BRCT) domain IRT44_RS08170 PF00171 Aldehyde dehydrogenase family IRT44_RS08175 PF00563 EAL domain IRT44_RS08175 PF00990 Diguanylate cyclase, GGDEF domain IRT44_RS08175 PF03707 Bacterial signalling protein N terminal repeat IRT44_RS08180 PF02666 Phosphatidylserine decarboxylase IRT44_RS08185 PF02686 Glu-tRNAGln amidotransferase C subunit IRT44_RS08190 PF01425 Amidase IRT44_RS08195 PF02934 GatB/GatE catalytic domain IRT44_RS08195 PF02637 GatB domain IRT44_RS08210 PF00005 ABC transporter IRT44_RS08215 PF12679 ABC-2 family transporter protein IRT44_RS08220 PF00480 ROK family IRT44_RS08225 PF00781 Diacylglycerol kinase catalytic domain IRT44_RS08230 PF01938 TRAM domain IRT44_RS08230 PF05958 tRNA (Uracil-5-)-methyltransferase IRT44_RS08240 PF00872 Transposase, Mutator family IRT44_RS08255 PF01695 IstB-like ATP binding protein IRT44_RS08260 PF00665 Integrase core domain IRT44_RS08260 PF02796 Helix-turn-helix domain of resolvase IRT44_RS08275 PF00378 Enoyl-CoA hydratase/isomerase IRT44_RS08280 PF13302 Acetyltransferase (GNAT) domain IRT44_RS08290 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS08295 PF05853 beta-keto acid cleavage enzyme IRT44_RS08300 PF08546 Ketopantoate reductase PanE/ApbA C terminal IRT44_RS08300 PF02558 Ketopantoate reductase PanE/ApbA IRT44_RS08305 PF02447 GntP family permease IRT44_RS08315 PF08818 Domain of unknown function (DU1801) IRT44_RS08325 PF08818 Domain of unknown function (DU1801) IRT44_RS08335 PF02311 AraC-like ligand binding domain IRT44_RS08335 PF12833 Helix-turn-helix domain IRT44_RS08340 PF13458 Periplasmic binding protein IRT44_RS08345 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS08350 PF11862 Domain of unknown function (DUF3382) IRT44_RS08350 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS08355 PF12399 Branched-chain amino acid ATP-binding cassette transporter IRT44_RS08355 PF00005 ABC transporter IRT44_RS08360 PF00005 ABC transporter IRT44_RS08365 PF00491 Arginase family IRT44_RS08370 PF17392 Urocanase C-terminal domain IRT44_RS08370 PF17391 Urocanase N-terminal domain IRT44_RS08370 PF01175 Urocanase Rossmann-like domain IRT44_RS08375 PF01979 Amidohydrolase family IRT44_RS08380 PF01497 Periplasmic binding protein IRT44_RS08380 PF12833 Helix-turn-helix domain IRT44_RS08385 PF01497 Periplasmic binding protein IRT44_RS08390 PF00756 Putative esterase IRT44_RS08395 PF00106 short chain dehydrogenase IRT44_RS08400 PF00425 chorismate binding enzyme IRT44_RS08405 PF00501 AMP-binding enzyme IRT44_RS08405 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS08410 PF00857 Isochorismatase family IRT44_RS08410 PF00550 Phosphopantetheine attachment site IRT44_RS08415 PF00975 Thioesterase domain IRT44_RS08415 PF00550 Phosphopantetheine attachment site IRT44_RS08415 PF00668 Condensation domain IRT44_RS08415 PF00501 AMP-binding enzyme IRT44_RS08415 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS08420 PF03621 MbtH-like protein IRT44_RS08425 PF01648 4'-phosphopantetheinyl transferase superfamily IRT44_RS08435 PF00474 Sodium:solute symporter family IRT44_RS08440 PF00491 Arginase family IRT44_RS08445 PF00202 Aminotransferase class-III IRT44_RS08450 PF00158 Sigma-54 interaction domain IRT44_RS08455 PF07486 Cell Wall Hydrolase IRT44_RS08475 PF03965 Penicillinase repressor IRT44_RS08480 PF01435 Peptidase family M48 IRT44_RS08485 PF07681 DoxX IRT44_RS08490 PF00753 Metallo-beta-lactamase superfamily IRT44_RS08500 PF00375 Sodium:dicarboxylate symporter family IRT44_RS08505 PF04204 Homoserine O-succinyltransferase IRT44_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS08510 PF03466 LysR substrate binding domain IRT44_RS08515 PF03788 LrgA family IRT44_RS08520 PF04172 LrgB-like family IRT44_RS08530 PF01266 FAD dependent oxidoreductase IRT44_RS08535 PF00011 Hsp20/alpha crystallin family IRT44_RS08545 PF02535 ZIP Zinc transporter IRT44_RS08550 PF01618 MotA/TolQ/ExbB proton channel family IRT44_RS08555 PF00691 OmpA family IRT44_RS08555 PF13677 Membrane MotB of proton-channel complex MotA/MotB IRT44_RS08560 PF01638 HxlR-like helix-turn-helix IRT44_RS08565 PF01965 DJ-1/PfpI family IRT44_RS08580 PF02796 Helix-turn-helix domain of resolvase IRT44_RS08580 PF00665 Integrase core domain IRT44_RS08585 PF01695 IstB-like ATP binding protein IRT44_RS08600 PF01451 Low molecular weight phosphotyrosine protein phosphatase IRT44_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS08605 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS08605 PF00989 PAS fold IRT44_RS08610 PF00158 Sigma-54 interaction domain IRT44_RS08610 PF00072 Response regulator receiver domain IRT44_RS08610 PF02954 Bacterial regulatory protein, Fis family IRT44_RS08615 PF02667 Short chain fatty acid transporter IRT44_RS08620 PF00571 CBS domain IRT44_RS08620 PF01595 Cyclin M transmembrane N-terminal domain IRT44_RS08620 PF03471 Transporter associated domain IRT44_RS08660 PF02687 FtsX-like permease family IRT44_RS08660 PF12704 MacB-like periplasmic core domain IRT44_RS08665 PF00005 ABC transporter IRT44_RS08670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_RS08675 PF00342 Phosphoglucose isomerase IRT44_RS08680 PF12728 Helix-turn-helix domain IRT44_RS08685 PF01266 FAD dependent oxidoreductase IRT44_RS08695 PF08868 YugN-like family IRT44_RS08700 PF00293 NUDIX domain IRT44_RS08705 PF01513 ATP-NAD kinase IRT44_RS08715 PF04851 Type III restriction enzyme, res subunit IRT44_RS08715 PF00929 Exonuclease IRT44_RS08715 PF13307 Helicase C-terminal domain IRT44_RS08725 PF00909 Ammonium Transporter Family IRT44_RS08740 PF01751 Toprim domain IRT44_RS08750 PF02673 Bacitracin resistance protein BacA IRT44_RS08755 PF13509 S1 domain IRT44_RS08755 PF17783 CvfB-like winged helix domain IRT44_RS08775 PF16868 NMT1-like family IRT44_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS08785 PF00072 Response regulator receiver domain IRT44_RS08785 PF08664 YcbB domain IRT44_RS08790 PF10776 Protein of unknown function (DUF2600) IRT44_RS08815 PF07995 Glucose / Sorbosone dehydrogenase IRT44_RS08820 PF00158 Sigma-54 interaction domain IRT44_RS08820 PF00072 Response regulator receiver domain IRT44_RS08820 PF02954 Bacterial regulatory protein, Fis family IRT44_RS08825 PF01619 Proline dehydrogenase IRT44_RS08830 PF00730 HhH-GPD superfamily base excision DNA repair protein IRT44_RS08835 PF05525 Branched-chain amino acid transport protein IRT44_RS08840 PF00892 EamA-like transporter family IRT44_RS08855 PF17284 Spermidine synthase tetramerisation domain IRT44_RS08860 PF00005 ABC transporter IRT44_RS08870 PF00072 Response regulator receiver domain IRT44_RS08870 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS08875 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS08880 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_RS08880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_RS08895 PF02638 Glycosyl hydrolase-like 10 IRT44_RS08900 PF01048 Phosphorylase superfamily IRT44_RS08905 PF02621 Menaquinone biosynthesis IRT44_RS08915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_RS08935 PF05958 tRNA (Uracil-5-)-methyltransferase IRT44_RS08935 PF01938 TRAM domain IRT44_RS08945 PF00585 C-terminal regulatory domain of Threonine dehydratase IRT44_RS08945 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_RS08955 PF02073 Thermophilic metalloprotease (M29) IRT44_RS08965 PF02632 BioY family IRT44_RS08970 PF00067 Cytochrome P450 IRT44_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS08975 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS08975 PF00989 PAS fold IRT44_RS08975 PF16736 Single Cache-like IRT44_RS08980 PF00072 Response regulator receiver domain IRT44_RS08980 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS08985 PF00877 NlpC/P60 family IRT44_RS08995 PF04012 PspA/IM30 family IRT44_RS09000 PF00398 Ribosomal RNA adenine dimethylase IRT44_RS09005 PF09922 Cell wall-active antibiotics response 4TMS YvqF IRT44_RS09010 PF00672 HAMP domain IRT44_RS09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS09010 PF07730 Histidine kinase IRT44_RS09015 PF00072 Response regulator receiver domain IRT44_RS09015 PF00196 Bacterial regulatory proteins, luxR family IRT44_RS09025 PF00149 Calcineurin-like phosphoesterase IRT44_RS09040 PF01925 Sulfite exporter TauE/SafE IRT44_RS09045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IRT44_RS09045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IRT44_RS09050 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IRT44_RS09055 PF04307 LexA-binding, inner membrane-associated putative hydrolase IRT44_RS09065 PF00633 Helix-hairpin-helix motif IRT44_RS09065 PF00730 HhH-GPD superfamily base excision DNA repair protein IRT44_RS09065 PF14815 NUDIX domain IRT44_RS09090 PF00583 Acetyltransferase (GNAT) family IRT44_RS09095 PF04167 Protein of unknown function (DUF402) IRT44_RS09100 PF00664 ABC transporter transmembrane region IRT44_RS09100 PF00005 ABC transporter IRT44_RS09105 PF07690 Major Facilitator Superfamily IRT44_RS09110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IRT44_RS09110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_RS09115 PF04298 Putative neutral zinc metallopeptidase IRT44_RS09120 PF00310 Glutamine amidotransferases class-II IRT44_RS09120 PF04898 Glutamate synthase central domain IRT44_RS09120 PF01645 Conserved region in glutamate synthase IRT44_RS09120 PF01493 GXGXG motif IRT44_RS09130 PF00202 Aminotransferase class-III IRT44_RS09135 PF00005 ABC transporter IRT44_RS09155 PF17418 Sporulation delaying protein SdpA IRT44_RS09170 PF12822 ECF transporter, substrate-specific component IRT44_RS09175 PF03129 Anticodon binding domain IRT44_RS09175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_RS09175 PF09180 Prolyl-tRNA synthetase, C-terminal IRT44_RS09180 PF13419 Haloacid dehalogenase-like hydrolase IRT44_RS09190 PF00578 AhpC/TSA family IRT44_RS09195 PF05343 M42 glutamyl aminopeptidase IRT44_RS09205 PF01923 Cobalamin adenosyltransferase IRT44_RS09215 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IRT44_RS09220 PF00730 HhH-GPD superfamily base excision DNA repair protein IRT44_RS09220 PF00633 Helix-hairpin-helix motif IRT44_RS09220 PF10576 Iron-sulfur binding domain of endonuclease III IRT44_RS09225 PF01475 Ferric uptake regulator family IRT44_RS09230 PF00704 Glycosyl hydrolases family 18 IRT44_RS09235 PF11023 Zinc-ribbon containing domain IRT44_RS09325 PF01814 Hemerythrin HHE cation binding domain IRT44_RS09325 PF04405 Domain of Unknown function (DUF542) IRT44_RS09330 PF14256 YwiC-like protein IRT44_RS09335 PF01814 Hemerythrin HHE cation binding domain IRT44_RS09335 PF04405 Domain of Unknown function (DUF542) IRT44_RS09340 PF04343 Protein of unknown function, DUF488 IRT44_RS09345 PF00027 Cyclic nucleotide-binding domain IRT44_RS09345 PF00325 Bacterial regulatory proteins, crp family IRT44_RS09355 PF14710 Respiratory nitrate reductase alpha N-terminal IRT44_RS09355 PF01568 Molydopterin dinucleotide binding domain IRT44_RS09355 PF00384 Molybdopterin oxidoreductase IRT44_RS09360 PF13247 4Fe-4S dicluster domain IRT44_RS09360 PF14711 Respiratory nitrate reductase beta C-terminal IRT44_RS09365 PF02613 Nitrate reductase delta subunit IRT44_RS09370 PF02665 Nitrate reductase gamma subunit IRT44_RS09375 PF07690 Major Facilitator Superfamily IRT44_RS09385 PF04055 Radical SAM superfamily IRT44_RS09385 PF13186 Iron-sulfur cluster-binding domain IRT44_RS09390 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_RS09395 PF00994 Probable molybdopterin binding domain IRT44_RS09395 PF03453 MoeA N-terminal region (domain I and II) IRT44_RS09395 PF03454 MoeA C-terminal region (domain IV) IRT44_RS09400 PF00860 Permease family IRT44_RS09410 PF00075 RNase H IRT44_RS09415 PF08331 Domain of unknown function (DUF1730) IRT44_RS09420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IRT44_RS09420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IRT44_RS09425 PF12671 Putative amidase domain IRT44_RS09430 PF00588 SpoU rRNA Methylase family IRT44_RS09435 PF13419 Haloacid dehalogenase-like hydrolase IRT44_RS09440 PF06798 PrkA serine protein kinase C-terminal domain IRT44_RS09440 PF08298 PrkA AAA domain IRT44_RS09445 PF04285 Protein of unknown function (DUF444) IRT44_RS09455 PF00483 Nucleotidyl transferase IRT44_RS09460 PF13439 Glycosyltransferase Family 4 IRT44_RS09460 PF00534 Glycosyl transferases group 1 IRT44_RS09470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_RS09470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_RS09470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_RS09470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_RS09475 PF01238 Phosphomannose isomerase type I IRT44_RS09485 PF00072 Response regulator receiver domain IRT44_RS09485 PF04397 LytTr DNA-binding domain IRT44_RS09490 PF00072 Response regulator receiver domain IRT44_RS09490 PF01966 HD domain IRT44_RS09495 PF16363 GDP-mannose 4,6 dehydratase IRT44_RS09535 PF01037 Lrp/AsnC ligand binding domain IRT44_RS09540 PF00155 Aminotransferase class I and II IRT44_RS09545 PF00324 Amino acid permease IRT44_RS09555 PF08402 TOBE domain IRT44_RS09555 PF00005 ABC transporter IRT44_RS09560 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS09565 PF13344 Haloacid dehalogenase-like hydrolase IRT44_RS09570 PF04309 Glycerol-3-phosphate responsive antiterminator IRT44_RS09575 PF01266 FAD dependent oxidoreductase IRT44_RS09575 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IRT44_RS09585 PF00561 alpha/beta hydrolase fold IRT44_RS09600 PF01695 IstB-like ATP binding protein IRT44_RS09605 PF02796 Helix-turn-helix domain of resolvase IRT44_RS09605 PF00665 Integrase core domain IRT44_RS09620 PF00171 Aldehyde dehydrogenase family IRT44_RS09625 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IRT44_RS09625 PF08666 SAF domain IRT44_RS09630 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IRT44_RS09630 PF08666 SAF domain IRT44_RS09635 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_RS09685 PF10960 BhlA holin family IRT44_RS09695 PF00210 Ferritin-like domain IRT44_RS09700 PF12804 MobA-like NTP transferase domain IRT44_RS09705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS09710 PF02634 FdhD/NarQ family IRT44_RS09715 PF07690 Major Facilitator Superfamily IRT44_RS09720 PF10057 Uncharacterized conserved protein (DUF2294) IRT44_RS09725 PF03453 MoeA N-terminal region (domain I and II) IRT44_RS09725 PF00994 Probable molybdopterin binding domain IRT44_RS09725 PF03454 MoeA C-terminal region (domain IV) IRT44_RS09730 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IRT44_RS09740 PF02673 Bacitracin resistance protein BacA IRT44_RS09745 PF07681 DoxX IRT44_RS09760 PF04241 Protein of unknown function (DUF423) IRT44_RS09770 PF04293 SpoVR like protein IRT44_RS09775 PF07690 Major Facilitator Superfamily IRT44_RS09780 PF07690 Major Facilitator Superfamily IRT44_RS09790 PF07690 Major Facilitator Superfamily IRT44_RS09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS09795 PF03466 LysR substrate binding domain IRT44_RS09805 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IRT44_RS09810 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_RS09815 PF00510 Cytochrome c oxidase subunit III IRT44_RS09825 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS09830 PF07690 Major Facilitator Superfamily IRT44_RS09840 PF12557 Cob(I)alamin adenosyltransferase N terminal IRT44_RS09840 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IRT44_RS09845 PF00155 Aminotransferase class I and II IRT44_RS09850 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IRT44_RS09855 PF02654 Cobalamin-5-phosphate synthase IRT44_RS09865 PF03186 CobD/Cbib protein IRT44_RS09870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IRT44_RS09870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS09875 PF01903 CbiX IRT44_RS09880 PF02571 Precorrin-6x reductase CbiJ/CobK IRT44_RS09885 PF02570 Precorrin-8X methylmutase IRT44_RS09890 PF01888 CbiD IRT44_RS09895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS09900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS09905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS09910 PF11760 Cobalamin synthesis G N-terminal IRT44_RS09910 PF01890 Cobalamin synthesis G C-terminus IRT44_RS09910 PF11761 Cobalamin biosynthesis central region IRT44_RS09915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_RS09915 PF07685 CobB/CobQ-like glutamine amidotransferase domain IRT44_RS09920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_RS09920 PF07685 CobB/CobQ-like glutamine amidotransferase domain IRT44_RS09925 PF02277 Phosphoribosyltransferase IRT44_RS09930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS09935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_RS09935 PF10414 Sirohaem synthase dimerisation region IRT44_RS09935 PF14824 Sirohaem biosynthesis protein central IRT44_RS09940 PF00072 Response regulator receiver domain IRT44_RS09940 PF02954 Bacterial regulatory protein, Fis family IRT44_RS09940 PF00158 Sigma-54 interaction domain IRT44_RS09945 PF03812 2-keto-3-deoxygluconate permease IRT44_RS09950 PF07005 Sugar-binding N-terminal domain IRT44_RS09950 PF17042 Nucleotide-binding C-terminal domain IRT44_RS09970 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_RS09980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_RS09985 PF07729 FCD domain IRT44_RS09985 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS09990 PF00549 CoA-ligase IRT44_RS09990 PF08442 ATP-grasp domain IRT44_RS09995 PF02629 CoA binding domain IRT44_RS09995 PF00549 CoA-ligase IRT44_RS10005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IRT44_RS10010 PF02910 Fumarate reductase flavoprotein C-term IRT44_RS10010 PF00890 FAD binding domain IRT44_RS10015 PF13183 4Fe-4S dicluster domain IRT44_RS10015 PF13085 2Fe-2S iron-sulfur cluster binding domain IRT44_RS10020 PF05681 Fumarate hydratase (Fumerase) IRT44_RS10030 PF03328 HpcH/HpaI aldolase/citrate lyase family IRT44_RS10035 PF00893 Small Multidrug Resistance protein IRT44_RS10040 PF00893 Small Multidrug Resistance protein IRT44_RS10045 PF03099 Biotin/lipoate A/B protein ligase family IRT44_RS10045 PF10437 Bacterial lipoate protein ligase C-terminus IRT44_RS10050 PF00375 Sodium:dicarboxylate symporter family IRT44_RS10055 PF02885 Glycosyl transferase family, helical bundle domain IRT44_RS10055 PF00591 Glycosyl transferase family, a/b domain IRT44_RS10060 PF08327 Activator of Hsp90 ATPase homolog 1-like protein IRT44_RS10065 PF01022 Bacterial regulatory protein, arsR family IRT44_RS10070 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_RS10075 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_RS10075 PF17203 Single cache domain 3 IRT44_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS10080 PF00072 Response regulator receiver domain IRT44_RS10080 PF08279 HTH domain IRT44_RS10085 PF17676 LD-carboxypeptidase C-terminal domain IRT44_RS10085 PF02016 LD-carboxypeptidase N-terminal domain IRT44_RS10090 PF00210 Ferritin-like domain IRT44_RS10095 PF00485 Phosphoribulokinase / Uridine kinase family IRT44_RS10100 PF04463 Protein of unknown function (DUF523) IRT44_RS10105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IRT44_RS10105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_RS10110 PF01380 SIS domain IRT44_RS10110 PF01418 Helix-turn-helix domain, rpiR family IRT44_RS10115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IRT44_RS10115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IRT44_RS10120 PF02447 GntP family permease IRT44_RS10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS10125 PF03466 LysR substrate binding domain IRT44_RS10130 PF00860 Permease family IRT44_RS10155 PF00579 tRNA synthetases class I (W and Y) IRT44_RS10165 PF01546 Peptidase family M20/M25/M40 IRT44_RS10165 PF07687 Peptidase dimerisation domain IRT44_RS10170 PF11755 Protein of unknown function (DUF3311) IRT44_RS10175 PF00474 Sodium:solute symporter family IRT44_RS10195 PF01979 Amidohydrolase family IRT44_RS10200 PF00872 Transposase, Mutator family IRT44_RS10205 PF02796 Helix-turn-helix domain of resolvase IRT44_RS10205 PF00665 Integrase core domain IRT44_RS10210 PF01695 IstB-like ATP binding protein IRT44_RS10215 PF01380 SIS domain IRT44_RS10215 PF01418 Helix-turn-helix domain, rpiR family IRT44_RS10220 PF00144 Beta-lactamase IRT44_RS10225 PF01547 Bacterial extracellular solute-binding protein IRT44_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS10235 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS10240 PF01869 BadF/BadG/BcrA/BcrD ATPase family IRT44_RS10255 PF00990 Diguanylate cyclase, GGDEF domain IRT44_RS10255 PF07694 5TMR of 5TMR-LYT IRT44_RS10260 PF03553 Na+/H+ antiporter family IRT44_RS10280 PF01547 Bacterial extracellular solute-binding protein IRT44_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS10295 PF10518 TAT (twin-arginine translocation) pathway signal sequence IRT44_RS10295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_RS10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS10335 PF10417 C-terminal domain of 1-Cys peroxiredoxin IRT44_RS10335 PF00578 AhpC/TSA family IRT44_RS10355 PF14398 YheC/D like ATP-grasp IRT44_RS10360 PF14398 YheC/D like ATP-grasp IRT44_RS10365 PF14398 YheC/D like ATP-grasp IRT44_RS10370 PF04286 Protein of unknown function (DUF445) IRT44_RS10375 PF03061 Thioesterase superfamily IRT44_RS10375 PF00571 CBS domain IRT44_RS10375 PF07085 DRTGG domain IRT44_RS10375 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS10380 PF01022 Bacterial regulatory protein, arsR family IRT44_RS10395 PF01336 OB-fold nucleic acid binding domain IRT44_RS10395 PF02811 PHP domain IRT44_RS10395 PF14579 Helix-hairpin-helix motif IRT44_RS10395 PF07733 Bacterial DNA polymerase III alpha NTPase domain IRT44_RS10395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IRT44_RS10400 PF00390 Malic enzyme, N-terminal domain IRT44_RS10400 PF03949 Malic enzyme, NAD binding domain IRT44_RS10405 PF07729 FCD domain IRT44_RS10405 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS10415 PF01039 Carboxyl transferase domain IRT44_RS10415 PF17848 Acetyl-coA carboxylase zinc finger domain IRT44_RS10420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IRT44_RS10425 PF00365 Phosphofructokinase IRT44_RS10430 PF00391 PEP-utilising enzyme, mobile domain IRT44_RS10430 PF00224 Pyruvate kinase, barrel domain IRT44_RS10430 PF02887 Pyruvate kinase, alpha/beta domain IRT44_RS10435 PF02867 Ribonucleotide reductase, barrel domain IRT44_RS10435 PF17975 Ribonucleotide reductase alpha domain IRT44_RS10440 PF03061 Thioesterase superfamily IRT44_RS10445 PF04186 FxsA cytoplasmic membrane protein IRT44_RS10450 PF01594 AI-2E family transporter IRT44_RS10460 PF00180 Isocitrate/isopropylmalate dehydrogenase IRT44_RS10465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IRT44_RS10465 PF00056 lactate/malate dehydrogenase, NAD binding domain IRT44_RS10470 PF00072 Response regulator receiver domain IRT44_RS10470 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS10475 PF00989 PAS fold IRT44_RS10475 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS10475 PF16736 Single Cache-like IRT44_RS10480 PF01895 PhoU domain IRT44_RS10490 PF04294 VanW like protein IRT44_RS10495 PF01047 MarR family IRT44_RS10505 PF13533 Biotin-lipoyl like IRT44_RS10510 PF07690 Major Facilitator Superfamily IRT44_RS10530 PF04748 Divergent polysaccharide deacetylase IRT44_RS10535 PF01367 5'-3' exonuclease, C-terminal SAM fold IRT44_RS10535 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IRT44_RS10535 PF00476 DNA polymerase family A IRT44_RS10540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IRT44_RS10540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IRT44_RS10540 PF06827 Zinc finger found in FPG and IleRS IRT44_RS10545 PF01121 Dephospho-CoA kinase IRT44_RS10550 PF10145 Phage-related minor tail protein IRT44_RS10550 PF01464 Transglycosylase SLT domain IRT44_RS10550 PF01551 Peptidase family M23 IRT44_RS10555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IRT44_RS10555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IRT44_RS10565 PF01966 HD domain IRT44_RS10565 PF11871 Domain of unknown function (DUF3391) IRT44_RS10570 PF03477 ATP cone domain IRT44_RS10580 PF01695 IstB-like ATP binding protein IRT44_RS10580 PF07319 Primosomal protein DnaI N-terminus IRT44_RS10600 PF01695 IstB-like ATP binding protein IRT44_RS10605 PF00665 Integrase core domain IRT44_RS10605 PF02796 Helix-turn-helix domain of resolvase IRT44_RS10625 PF13538 UvrD-like helicase C-terminal domain IRT44_RS10635 PF00881 Nitroreductase family IRT44_RS10645 PF03702 Anhydro-N-acetylmuramic acid kinase IRT44_RS10650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS10655 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS10660 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS10660 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_RS10665 PF00144 Beta-lactamase IRT44_RS10670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS10670 PF00005 ABC transporter IRT44_RS10675 PF00005 ABC transporter IRT44_RS10675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS10690 PF02754 Cysteine-rich domain IRT44_RS10690 PF13183 4Fe-4S dicluster domain IRT44_RS10695 PF00375 Sodium:dicarboxylate symporter family IRT44_RS10710 PF09671 Spore coat protein (Spore_GerQ) IRT44_RS10715 PF07486 Cell Wall Hydrolase IRT44_RS10735 PF04055 Radical SAM superfamily IRT44_RS10745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IRT44_RS10745 PF02824 TGS domain IRT44_RS10745 PF03129 Anticodon binding domain IRT44_RS10745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_RS10750 PF06463 Molybdenum Cofactor Synthesis C IRT44_RS10750 PF04055 Radical SAM superfamily IRT44_RS10755 PF00707 Translation initiation factor IF-3, C-terminal domain IRT44_RS10755 PF05198 Translation initiation factor IF-3, N-terminal domain IRT44_RS10760 PF01632 Ribosomal protein L35 IRT44_RS10765 PF00453 Ribosomal protein L20 IRT44_RS10770 PF01507 Phosphoadenosine phosphosulfate reductase family IRT44_RS10775 PF01747 ATP-sulfurylase IRT44_RS10775 PF14306 PUA-like domain IRT44_RS10780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IRT44_RS10780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_RS10780 PF00205 Thiamine pyrophosphate enzyme, central domain IRT44_RS10785 PF01842 ACT domain IRT44_RS10785 PF10369 Small subunit of acetolactate synthase IRT44_RS10790 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IRT44_RS10790 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IRT44_RS10795 PF00682 HMGL-like IRT44_RS10795 PF08502 LeuA allosteric (dimerisation) domain IRT44_RS10800 PF00180 Isocitrate/isopropylmalate dehydrogenase IRT44_RS10815 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_RS10815 PF05036 Sporulation related domain IRT44_RS10820 PF00994 Probable molybdopterin binding domain IRT44_RS10825 PF00919 Uncharacterized protein family UPF0004 IRT44_RS10825 PF01938 TRAM domain IRT44_RS10825 PF04055 Radical SAM superfamily IRT44_RS10830 PF09335 SNARE associated Golgi protein IRT44_RS10835 PF06961 Protein of unknown function (DUF1294) IRT44_RS10840 PF14098 Small, acid-soluble spore protein I IRT44_RS10845 PF02080 TrkA-C domain IRT44_RS10845 PF02254 TrkA-N domain IRT44_RS10850 PF00588 SpoU rRNA Methylase family IRT44_RS10850 PF08032 RNA 2'-O ribose methyltransferase substrate binding IRT44_RS10855 PF01409 tRNA synthetases class II core domain (F) IRT44_RS10855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IRT44_RS10865 PF05164 Cell division protein ZapA IRT44_RS10870 PF02540 NAD synthase IRT44_RS10875 PF00731 AIR carboxylase IRT44_RS10885 PF00488 MutS domain V IRT44_RS10885 PF01713 Smr domain IRT44_RS10890 PF03994 Domain of Unknown Function (DUF350) IRT44_RS10900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_RS10900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_RS10900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_RS10905 PF03600 Citrate transporter IRT44_RS10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS10910 PF00989 PAS fold IRT44_RS10910 PF17203 Single cache domain 3 IRT44_RS10910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_RS10915 PF00072 Response regulator receiver domain IRT44_RS10925 PF04951 D-aminopeptidase IRT44_RS10930 PF00534 Glycosyl transferases group 1 IRT44_RS10955 PF03023 Lipid II flippase MurJ IRT44_RS10965 PF01943 Polysaccharide biosynthesis protein IRT44_RS10965 PF14667 Polysaccharide biosynthesis C-terminal domain IRT44_RS10970 PF01209 ubiE/COQ5 methyltransferase family IRT44_RS10985 PF02803 Thiolase, C-terminal domain IRT44_RS10985 PF00108 Thiolase, N-terminal domain IRT44_RS10990 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_RS10995 PF00501 AMP-binding enzyme IRT44_RS10995 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS11000 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS11000 PF08359 YsiA-like protein, C-terminal region IRT44_RS11005 PF00378 Enoyl-CoA hydratase/isomerase IRT44_RS11010 PF01012 Electron transfer flavoprotein domain IRT44_RS11015 PF00766 Electron transfer flavoprotein FAD-binding domain IRT44_RS11015 PF01012 Electron transfer flavoprotein domain IRT44_RS11025 PF00085 Thioredoxin IRT44_RS11030 PF02151 UvrB/uvrC motif IRT44_RS11030 PF01541 GIY-YIG catalytic domain IRT44_RS11030 PF08459 UvrC Helix-hairpin-helix N-terminal IRT44_RS11035 PF01177 Asp/Glu/Hydantoin racemase IRT44_RS11040 PF13840 ACT domain IRT44_RS11040 PF00696 Amino acid kinase family IRT44_RS11050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IRT44_RS11055 PF02910 Fumarate reductase flavoprotein C-term IRT44_RS11055 PF00890 FAD binding domain IRT44_RS11060 PF13183 4Fe-4S dicluster domain IRT44_RS11060 PF13085 2Fe-2S iron-sulfur cluster binding domain IRT44_RS11065 PF07690 Major Facilitator Superfamily IRT44_RS11070 PF01047 MarR family IRT44_RS11080 PF06280 Fn3-like domain IRT44_RS11080 PF00746 LPXTG cell wall anchor motif IRT44_RS11080 PF02225 PA domain IRT44_RS11080 PF00082 Subtilase family IRT44_RS11090 PF13690 Chemotaxis phosphatase CheX IRT44_RS11100 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS11105 PF00196 Bacterial regulatory proteins, luxR family IRT44_RS11110 PF00158 Sigma-54 interaction domain IRT44_RS11110 PF00989 PAS fold IRT44_RS11110 PF02954 Bacterial regulatory protein, Fis family IRT44_RS11115 PF00202 Aminotransferase class-III IRT44_RS11120 PF00171 Aldehyde dehydrogenase family IRT44_RS11125 PF00324 Amino acid permease IRT44_RS11140 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_RS11145 PF08279 HTH domain IRT44_RS11145 PF05043 Mga helix-turn-helix domain IRT44_RS11145 PF00874 PRD domain IRT44_RS11145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_RS11150 PF01979 Amidohydrolase family IRT44_RS11180 PF03841 L-seryl-tRNA selenium transferase IRT44_RS11190 PF00381 PTS HPr component phosphorylation site IRT44_RS11195 PF01235 Sodium:alanine symporter family IRT44_RS11200 PF01012 Electron transfer flavoprotein domain IRT44_RS11205 PF00766 Electron transfer flavoprotein FAD-binding domain IRT44_RS11205 PF01012 Electron transfer flavoprotein domain IRT44_RS11240 PF00535 Glycosyl transferase family 2 IRT44_RS11255 PF07098 Protein of unknown function (DUF1360) IRT44_RS11260 PF00535 Glycosyl transferase family 2 IRT44_RS11270 PF01050 Mannose-6-phosphate isomerase IRT44_RS11270 PF00483 Nucleotidyl transferase IRT44_RS11275 PF01370 NAD dependent epimerase/dehydratase family IRT44_RS11285 PF00535 Glycosyl transferase family 2 IRT44_RS11300 PF00535 Glycosyl transferase family 2 IRT44_RS11320 PF13439 Glycosyltransferase Family 4 IRT44_RS11320 PF00534 Glycosyl transferases group 1 IRT44_RS11325 PF16363 GDP-mannose 4,6 dehydratase IRT44_RS11335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS11340 PF00989 PAS fold IRT44_RS11340 PF02954 Bacterial regulatory protein, Fis family IRT44_RS11340 PF00158 Sigma-54 interaction domain IRT44_RS11345 PF01546 Peptidase family M20/M25/M40 IRT44_RS11350 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS11355 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_RS11355 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS11360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS11360 PF00005 ABC transporter IRT44_RS11370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IRT44_RS11370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IRT44_RS11375 PF01177 Asp/Glu/Hydantoin racemase IRT44_RS11380 PF10646 Sporulation and spore germination IRT44_RS11390 PF01138 3' exoribonuclease family, domain 1 IRT44_RS11390 PF03725 3' exoribonuclease family, domain 2 IRT44_RS11400 PF12850 Calcineurin-like phosphoesterase superfamily domain IRT44_RS11405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IRT44_RS11405 PF05698 Bacterial trigger factor protein (TF) C-terminus IRT44_RS11405 PF05697 Bacterial trigger factor protein (TF) IRT44_RS11410 PF00574 Clp protease IRT44_RS11415 PF06689 ClpX C4-type zinc finger IRT44_RS11415 PF10431 C-terminal, D2-small domain, of ClpB protein IRT44_RS11415 PF07724 AAA domain (Cdc48 subfamily) IRT44_RS11420 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS11420 PF05362 Lon protease (S16) C-terminal proteolytic domain IRT44_RS11425 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS11425 PF02190 ATP-dependent protease La (LON) substrate-binding domain IRT44_RS11425 PF05362 Lon protease (S16) C-terminal proteolytic domain IRT44_RS11430 PF01926 50S ribosome-binding GTPase IRT44_RS11435 PF07555 beta-N-acetylglucosaminidase IRT44_RS11435 PF02838 Glycosyl hydrolase family 20, domain 2 IRT44_RS11435 PF00041 Fibronectin type III domain IRT44_RS11435 PF00754 F5/8 type C domain IRT44_RS11435 PF00963 Cohesin domain IRT44_RS11445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS11445 PF00672 HAMP domain IRT44_RS11445 PF02743 Cache domain IRT44_RS11450 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IRT44_RS11450 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IRT44_RS11450 PF01488 Shikimate / quinate 5-dehydrogenase IRT44_RS11455 PF01578 Cytochrome C assembly protein IRT44_RS11460 PF03900 Porphobilinogen deaminase, C-terminal domain IRT44_RS11460 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IRT44_RS11470 PF00490 Delta-aminolevulinic acid dehydratase IRT44_RS11475 PF00202 Aminotransferase class-III IRT44_RS11480 PF13333 Integrase core domain IRT44_RS11480 PF00665 Integrase core domain IRT44_RS11480 PF13276 HTH-like domain IRT44_RS11500 PF00561 alpha/beta hydrolase fold IRT44_RS11505 PF02872 5'-nucleotidase, C-terminal domain IRT44_RS11505 PF00149 Calcineurin-like phosphoesterase IRT44_RS11525 PF01208 Uroporphyrinogen decarboxylase (URO-D) IRT44_RS11530 PF00762 Ferrochelatase IRT44_RS11535 PF01593 Flavin containing amine oxidoreductase IRT44_RS11540 PF01476 LysM domain IRT44_RS11560 PF13426 PAS domain IRT44_RS11560 PF07228 Stage II sporulation protein E (SpoIIE) IRT44_RS11575 PF08264 Anticodon-binding domain of tRNA IRT44_RS11575 PF10458 Valyl tRNA synthetase tRNA binding arm IRT44_RS11575 PF00133 tRNA synthetases class I (I, L, M and V) IRT44_RS11580 PF02875 Mur ligase family, glutamate ligase domain IRT44_RS11580 PF08245 Mur ligase middle domain IRT44_RS11585 PF08245 Mur ligase middle domain IRT44_RS11585 PF02875 Mur ligase family, glutamate ligase domain IRT44_RS11585 PF01225 Mur ligase family, catalytic domain IRT44_RS11590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IRT44_RS11590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IRT44_RS11595 PF00999 Sodium/hydrogen exchanger family IRT44_RS11600 PF02080 TrkA-C domain IRT44_RS11625 PF02545 Maf-like protein IRT44_RS11630 PF04002 RadC-like JAB domain IRT44_RS11640 PF04085 rod shape-determining protein MreC IRT44_RS11645 PF04093 rod shape-determining protein MreD IRT44_RS11650 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS11650 PF03717 Penicillin-binding Protein dimerisation domain IRT44_RS11655 PF03775 Septum formation inhibitor MinC, C-terminal domain IRT44_RS11660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_RS11665 PF01098 Cell cycle protein IRT44_RS11670 PF00313 'Cold-shock' DNA-binding domain IRT44_RS11680 PF02163 Peptidase family M50 IRT44_RS11685 PF10150 Ribonuclease E/G family IRT44_RS11685 PF00575 S1 RNA binding domain IRT44_RS11690 PF00829 Ribosomal prokaryotic L21 protein IRT44_RS11695 PF04327 Cysteine protease Prp IRT44_RS11700 PF01016 Ribosomal L27 protein IRT44_RS11710 PF01926 50S ribosome-binding GTPase IRT44_RS11710 PF01018 GTP1/OBG IRT44_RS11710 PF09269 Domain of unknown function (DUF1967) IRT44_RS11730 PF00742 Homoserine dehydrogenase IRT44_RS11730 PF01842 ACT domain IRT44_RS11730 PF03447 Homoserine dehydrogenase, NAD binding domain IRT44_RS11735 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_RS11740 PF08544 GHMP kinases C terminal IRT44_RS11740 PF00288 GHMP kinases N terminal domain IRT44_RS11745 PF01842 ACT domain IRT44_RS11745 PF00800 Prephenate dehydratase IRT44_RS11765 PF00149 Calcineurin-like phosphoesterase IRT44_RS11765 PF02872 5'-nucleotidase, C-terminal domain IRT44_RS11785 PF02075 Crossover junction endodeoxyribonuclease RuvC IRT44_RS11790 PF01330 RuvA N terminal domain IRT44_RS11790 PF07499 RuvA, C-terminal domain IRT44_RS11795 PF05496 Holliday junction DNA helicase RuvB P-loop domain IRT44_RS11795 PF05491 RuvB C-terminal winged helix domain IRT44_RS11795 PF17864 RuvB AAA lid domain IRT44_RS11800 PF11146 Protein of unknown function (DUF2905) IRT44_RS11810 PF08486 Stage II sporulation protein IRT44_RS11815 PF02547 Queuosine biosynthesis protein IRT44_RS11820 PF01702 Queuine tRNA-ribosyltransferase IRT44_RS11825 PF02699 Preprotein translocase subunit IRT44_RS11835 PF01544 CorA-like Mg2+ transporter protein IRT44_RS11840 PF04239 Protein of unknown function (DUF421) IRT44_RS11845 PF01943 Polysaccharide biosynthesis protein IRT44_RS11845 PF14667 Polysaccharide biosynthesis C-terminal domain IRT44_RS11855 PF02355 Protein export membrane protein IRT44_RS11855 PF07549 SecD/SecF GG Motif IRT44_RS11860 PF02355 Protein export membrane protein IRT44_RS11860 PF07549 SecD/SecF GG Motif IRT44_RS11865 PF01545 Cation efflux family IRT44_RS11865 PF16916 Dimerisation domain of Zinc Transporter IRT44_RS11870 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IRT44_RS11870 PF17768 RecJ OB domain IRT44_RS11870 PF01368 DHH family IRT44_RS11870 PF02272 DHHA1 domain IRT44_RS11875 PF00156 Phosphoribosyl transferase domain IRT44_RS11880 PF02824 TGS domain IRT44_RS11880 PF13291 ACT domain IRT44_RS11880 PF04607 Region found in RelA / SpoT proteins IRT44_RS11885 PF02580 D-Tyr-tRNA(Tyr) deacylase IRT44_RS11895 PF12697 Alpha/beta hydrolase family IRT44_RS11900 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS11900 PF08361 MAATS-type transcriptional repressor, C-terminal region IRT44_RS11905 PF08239 Bacterial SH3 domain IRT44_RS11905 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_RS11915 PF04055 Radical SAM superfamily IRT44_RS11920 PF03129 Anticodon binding domain IRT44_RS11920 PF13393 Histidyl-tRNA synthetase IRT44_RS11925 PF00152 tRNA synthetases class II (D, K and N) IRT44_RS11925 PF01336 OB-fold nucleic acid binding domain IRT44_RS11925 PF02938 GAD domain IRT44_RS11935 PF00899 ThiF family IRT44_RS11945 PF08220 DeoR-like helix-turn-helix domain IRT44_RS11945 PF00455 DeoR C terminal sensor domain IRT44_RS11950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_RS11950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IRT44_RS11955 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS11955 PF16193 AAA C-terminal domain IRT44_RS11955 PF12002 MgsA AAA+ ATPase C terminal IRT44_RS11965 PF02082 Transcriptional regulator IRT44_RS11970 PF00266 Aminotransferase class-V IRT44_RS11975 PF14490 Helix-hairpin-helix containing domain IRT44_RS11975 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain IRT44_RS11975 PF13538 UvrD-like helicase C-terminal domain IRT44_RS11995 PF03741 Integral membrane protein TerC family IRT44_RS12000 PF01594 AI-2E family transporter IRT44_RS12005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IRT44_RS12005 PF02272 DHHA1 domain IRT44_RS12005 PF01411 tRNA synthetases class II (A) IRT44_RS12010 PF06135 IreB regulatory phosphoprotein IRT44_RS12015 PF03652 Holliday junction resolvase IRT44_RS12020 PF06949 Protein of unknown function (DUF1292) IRT44_RS12025 PF02618 YceG-like family IRT44_RS12030 PF01596 O-methyltransferase IRT44_RS12040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS12045 PF03717 Penicillin-binding Protein dimerisation domain IRT44_RS12045 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS12055 PF00072 Response regulator receiver domain IRT44_RS12060 PF00455 DeoR C terminal sensor domain IRT44_RS12060 PF08220 DeoR-like helix-turn-helix domain IRT44_RS12065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IRT44_RS12065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IRT44_RS12070 PF00294 pfkB family carbohydrate kinase IRT44_RS12075 PF00005 ABC transporter IRT44_RS12080 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS12085 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS12105 PF13333 Integrase core domain IRT44_RS12105 PF00665 Integrase core domain IRT44_RS12105 PF13276 HTH-like domain IRT44_RS12115 PF04542 Sigma-70 region 2 IRT44_RS12115 PF04545 Sigma-70, region 4 IRT44_RS12120 PF09339 IclR helix-turn-helix domain IRT44_RS12120 PF01614 Bacterial transcriptional regulator IRT44_RS12125 PF07508 Recombinase IRT44_RS12125 PF00239 Resolvase, N terminal domain IRT44_RS12125 PF13408 Recombinase zinc beta ribbon domain IRT44_RS12130 PF04542 Sigma-70 region 2 IRT44_RS12130 PF04545 Sigma-70, region 4 IRT44_RS12135 PF00239 Resolvase, N terminal domain IRT44_RS12135 PF13408 Recombinase zinc beta ribbon domain IRT44_RS12135 PF07508 Recombinase IRT44_RS12145 PF00005 ABC transporter IRT44_RS12155 PF00005 ABC transporter IRT44_RS12160 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS12165 PF04542 Sigma-70 region 2 IRT44_RS12165 PF04545 Sigma-70, region 4 IRT44_RS12180 PF03641 Possible lysine decarboxylase IRT44_RS12195 PF01272 Transcription elongation factor, GreA/GreB, C-term IRT44_RS12195 PF03449 Transcription elongation factor, N-terminal IRT44_RS12205 PF00085 Thioredoxin IRT44_RS12210 PF02600 Disulfide bond formation protein DsbB IRT44_RS12215 PF00149 Calcineurin-like phosphoesterase IRT44_RS12220 PF02146 Sir2 family IRT44_RS12245 PF00005 ABC transporter IRT44_RS12245 PF16326 ABC transporter C-terminal domain IRT44_RS12245 PF12848 ABC transporter IRT44_RS12250 PF01063 Amino-transferase class IV IRT44_RS12255 PF03576 Peptidase family S58 IRT44_RS12265 PF13769 Virulence factor IRT44_RS12265 PF08712 Scaffold protein Nfu/NifU N terminal IRT44_RS12270 PF01593 Flavin containing amine oxidoreductase IRT44_RS12280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS12285 PF07722 Peptidase C26 IRT44_RS12290 PF11798 IMS family HHH motif IRT44_RS12290 PF00817 impB/mucB/samB family IRT44_RS12290 PF11799 impB/mucB/samB family C-terminal domain IRT44_RS12300 PF01926 50S ribosome-binding GTPase IRT44_RS12305 PF01488 Shikimate / quinate 5-dehydrogenase IRT44_RS12305 PF08501 Shikimate dehydrogenase substrate binding domain IRT44_RS12305 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IRT44_RS12310 PF01985 CRS1 / YhbY (CRM) domain IRT44_RS12315 PF01467 Cytidylyltransferase-like IRT44_RS12320 PF01966 HD domain IRT44_RS12330 PF13649 Methyltransferase domain IRT44_RS12335 PF08264 Anticodon-binding domain of tRNA IRT44_RS12335 PF00133 tRNA synthetases class I (I, L, M and V) IRT44_RS12335 PF13603 Leucyl-tRNA synthetase, Domain 2 IRT44_RS12335 PF09334 tRNA synthetases class I (M) IRT44_RS12340 PF03807 NADP oxidoreductase coenzyme F420-dependent IRT44_RS12340 PF14748 Pyrroline-5-carboxylate reductase dimerisation IRT44_RS12345 PF10531 SLBB domain IRT44_RS12350 PF00733 Asparagine synthase IRT44_RS12350 PF13537 Glutamine amidotransferase domain IRT44_RS12355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IRT44_RS12360 PF13567 Domain of unknown function (DUF4131) IRT44_RS12360 PF00753 Metallo-beta-lactamase superfamily IRT44_RS12360 PF03772 Competence protein IRT44_RS12365 PF08281 Sigma-70, region 4 IRT44_RS12365 PF04542 Sigma-70 region 2 IRT44_RS12380 PF01649 Ribosomal protein S20 IRT44_RS12385 PF03418 Germination protease IRT44_RS12390 PF07454 Stage II sporulation protein P (SpoIIP) IRT44_RS12400 PF00005 ABC transporter IRT44_RS12400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS12405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS12405 PF00005 ABC transporter IRT44_RS12410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS12415 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS12420 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_RS12420 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS12425 PF00557 Metallopeptidase family M24 IRT44_RS12425 PF01321 Creatinase/Prolidase N-terminal domain IRT44_RS12435 PF08281 Sigma-70, region 4 IRT44_RS12435 PF04542 Sigma-70 region 2 IRT44_RS12445 PF03144 Elongation factor Tu domain 2 IRT44_RS12445 PF06421 GTP-binding protein LepA C-terminus IRT44_RS12445 PF00009 Elongation factor Tu GTP binding domain IRT44_RS12445 PF00679 Elongation factor G C-terminus IRT44_RS12450 PF06969 HemN C-terminal domain IRT44_RS12450 PF04055 Radical SAM superfamily IRT44_RS12455 PF01628 HrcA protein C terminal domain IRT44_RS12455 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IRT44_RS12460 PF01025 GrpE IRT44_RS12465 PF00012 Hsp70 protein IRT44_RS12470 PF00226 DnaJ domain IRT44_RS12470 PF01556 DnaJ C terminal domain IRT44_RS12470 PF00684 DnaJ central domain IRT44_RS12480 PF04452 RNA methyltransferase IRT44_RS12485 PF04055 Radical SAM superfamily IRT44_RS12485 PF01938 TRAM domain IRT44_RS12485 PF00919 Uncharacterized protein family UPF0004 IRT44_RS12495 PF01791 DeoC/LacD family aldolase IRT44_RS12500 PF03788 LrgA family IRT44_RS12505 PF04172 LrgB-like family IRT44_RS12510 PF02690 Na+/Pi-cotransporter IRT44_RS12515 PF10672 S-adenosylmethionine-dependent methyltransferase IRT44_RS12515 PF17785 PUA-like domain IRT44_RS12530 PF01820 D-ala D-ala ligase N-terminus IRT44_RS12530 PF07478 D-ala D-ala ligase C-terminus IRT44_RS12535 PF08245 Mur ligase middle domain IRT44_RS12535 PF02875 Mur ligase family, glutamate ligase domain IRT44_RS12535 PF01225 Mur ligase family, catalytic domain IRT44_RS12540 PF01165 Ribosomal protein S21 IRT44_RS12545 PF09424 Yqey-like protein IRT44_RS12550 PF01972 Serine dehydrogenase proteinase IRT44_RS12550 PF01957 NfeD-like C-terminal, partner-binding IRT44_RS12555 PF12127 SigmaW regulon antibacterial IRT44_RS12570 PF07873 YabP family IRT44_RS12575 PF06898 Putative stage IV sporulation protein YqfD IRT44_RS12580 PF02562 PhoH-like protein IRT44_RS12585 PF02130 Uncharacterized protein family UPF0054 IRT44_RS12595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IRT44_RS12600 PF01926 50S ribosome-binding GTPase IRT44_RS12600 PF07650 KH domain IRT44_RS12610 PF02565 Recombination protein O C terminal IRT44_RS12610 PF11967 Recombination protein O N terminal IRT44_RS12615 PF02091 Glycyl-tRNA synthetase alpha subunit IRT44_RS12620 PF05746 DALR anticodon binding domain IRT44_RS12620 PF02092 Glycyl-tRNA synthetase beta subunit IRT44_RS12625 PF08279 HTH domain IRT44_RS12625 PF00571 CBS domain IRT44_RS12630 PF03618 Kinase/pyrophosphorylase IRT44_RS12635 PF01807 CHC2 zinc finger IRT44_RS12635 PF08275 DNA primase catalytic core, N-terminal domain IRT44_RS12635 PF10410 DnaB-helicase binding domain of primase IRT44_RS12640 PF03979 Sigma-70 factor, region 1.1 IRT44_RS12640 PF00140 Sigma-70 factor, region 1.2 IRT44_RS12640 PF04542 Sigma-70 region 2 IRT44_RS12640 PF04539 Sigma-70 region 3 IRT44_RS12640 PF04545 Sigma-70, region 4 IRT44_RS12655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_RS12655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_RS12655 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_RS12660 PF04816 tRNA (adenine(22)-N(1))-methyltransferase IRT44_RS12665 PF01784 NIF3 (NGG1p interacting factor 3) IRT44_RS12675 PF17820 PDZ domain IRT44_RS12675 PF03572 Peptidase family S41 IRT44_RS12675 PF01471 Putative peptidoglycan binding domain IRT44_RS12685 PF00665 Integrase core domain IRT44_RS12685 PF13276 HTH-like domain IRT44_RS12685 PF13333 Integrase core domain IRT44_RS12695 PF03372 Endonuclease/Exonuclease/phosphatase family IRT44_RS12760 PF04055 Radical SAM superfamily IRT44_RS12760 PF16199 Radical_SAM C-terminal domain IRT44_RS12765 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_RS12770 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_RS12780 PF00583 Acetyltransferase (GNAT) family IRT44_RS12790 PF00202 Aminotransferase class-III IRT44_RS12795 PF01144 Coenzyme A transferase IRT44_RS12800 PF01144 Coenzyme A transferase IRT44_RS12805 PF07687 Peptidase dimerisation domain IRT44_RS12805 PF01546 Peptidase family M20/M25/M40 IRT44_RS12810 PF00171 Aldehyde dehydrogenase family IRT44_RS12830 PF01695 IstB-like ATP binding protein IRT44_RS12835 PF02796 Helix-turn-helix domain of resolvase IRT44_RS12835 PF00665 Integrase core domain IRT44_RS12855 PF00501 AMP-binding enzyme IRT44_RS12855 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS12865 PF07075 Protein of unknown function (DUF1343) IRT44_RS12875 PF17932 Tetracyclin repressor-like, C-terminal domain IRT44_RS12875 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS12880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_RS12895 PF02525 Flavodoxin-like fold IRT44_RS12900 PF00082 Subtilase family IRT44_RS12910 PF03459 TOBE domain IRT44_RS12910 PF17912 MalK OB fold domain IRT44_RS12910 PF00005 ABC transporter IRT44_RS12915 PF13556 PucR C-terminal helix-turn-helix domain IRT44_RS12920 PF00149 Calcineurin-like phosphoesterase IRT44_RS12925 PF00501 AMP-binding enzyme IRT44_RS12925 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS12930 PF01545 Cation efflux family IRT44_RS12930 PF16916 Dimerisation domain of Zinc Transporter IRT44_RS12945 PF00072 Response regulator receiver domain IRT44_RS12945 PF00196 Bacterial regulatory proteins, luxR family IRT44_RS12950 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IRT44_RS12950 PF07730 Histidine kinase IRT44_RS12950 PF00672 HAMP domain IRT44_RS12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS12955 PF08543 Phosphomethylpyrimidine kinase IRT44_RS12965 PF04542 Sigma-70 region 2 IRT44_RS12965 PF08281 Sigma-70, region 4 IRT44_RS12975 PF01712 Deoxynucleoside kinase IRT44_RS12980 PF01712 Deoxynucleoside kinase IRT44_RS12985 PF13649 Methyltransferase domain IRT44_RS12990 PF01329 Pterin 4 alpha carbinolamine dehydratase IRT44_RS13000 PF03061 Thioesterase superfamily IRT44_RS13005 PF04134 Protein of unknown function, DUF393 IRT44_RS13025 PF00171 Aldehyde dehydrogenase family IRT44_RS13030 PF00120 Glutamine synthetase, catalytic domain IRT44_RS13075 PF00005 ABC transporter IRT44_RS13095 PF00884 Sulfatase IRT44_RS13100 PF05681 Fumarate hydratase (Fumerase) IRT44_RS13100 PF05683 Fumarase C-terminus IRT44_RS13105 PF01476 LysM domain IRT44_RS13105 PF01551 Peptidase family M23 IRT44_RS13110 PF00795 Carbon-nitrogen hydrolase IRT44_RS13130 PF04055 Radical SAM superfamily IRT44_RS13130 PF08756 YfkB-like domain IRT44_RS13140 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_RS13145 PF01521 Iron-sulphur cluster biosynthesis IRT44_RS13160 PF13537 Glutamine amidotransferase domain IRT44_RS13160 PF00733 Asparagine synthase IRT44_RS13165 PF06580 Histidine kinase IRT44_RS13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS13165 PF07694 5TMR of 5TMR-LYT IRT44_RS13170 PF04397 LytTr DNA-binding domain IRT44_RS13170 PF00072 Response regulator receiver domain IRT44_RS13175 PF04341 Protein of unknown function, DUF485 IRT44_RS13180 PF00474 Sodium:solute symporter family IRT44_RS13185 PF00474 Sodium:solute symporter family IRT44_RS13190 PF01261 Xylose isomerase-like TIM barrel IRT44_RS13200 PF03485 Arginyl tRNA synthetase N terminal domain IRT44_RS13200 PF05746 DALR anticodon binding domain IRT44_RS13200 PF00750 tRNA synthetases class I (R) IRT44_RS13215 PF00809 Pterin binding enzyme IRT44_RS13215 PF02607 B12 binding domain IRT44_RS13215 PF02310 B12 binding domain IRT44_RS13215 PF02574 Homocysteine S-methyltransferase IRT44_RS13215 PF02965 Vitamin B12 dependent methionine synthase, activation domain IRT44_RS13220 PF02219 Methylenetetrahydrofolate reductase IRT44_RS13220 PF02574 Homocysteine S-methyltransferase IRT44_RS13225 PF03167 Uracil DNA glycosylase superfamily IRT44_RS13230 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IRT44_RS13235 PF03144 Elongation factor Tu domain 2 IRT44_RS13235 PF16658 Class II release factor RF3, C-terminal domain IRT44_RS13235 PF00009 Elongation factor Tu GTP binding domain IRT44_RS13250 PF00581 Rhodanese-like domain IRT44_RS13280 PF05193 Peptidase M16 inactive domain IRT44_RS13280 PF00675 Insulinase (Peptidase family M16) IRT44_RS13285 PF00005 ABC transporter IRT44_RS13305 PF04397 LytTr DNA-binding domain IRT44_RS13305 PF00072 Response regulator receiver domain IRT44_RS13315 PF11084 Protein of unknown function (DUF2621) IRT44_RS13335 PF02796 Helix-turn-helix domain of resolvase IRT44_RS13335 PF00239 Resolvase, N terminal domain IRT44_RS13345 PF05675 Protein of unknown function (DUF817) IRT44_RS13350 PF13443 Cro/C1-type HTH DNA-binding domain IRT44_RS13355 PF11188 Protein of unknown function (DUF2975) IRT44_RS13370 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS13375 PF00005 ABC transporter IRT44_RS13385 PF12706 Beta-lactamase superfamily domain IRT44_RS13405 PF00082 Subtilase family IRT44_RS13415 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IRT44_RS13420 PF03466 LysR substrate binding domain IRT44_RS13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS13425 PF07690 Major Facilitator Superfamily IRT44_RS13430 PF00324 Amino acid permease IRT44_RS13435 PF00158 Sigma-54 interaction domain IRT44_RS13435 PF13426 PAS domain IRT44_RS13435 PF02954 Bacterial regulatory protein, Fis family IRT44_RS13440 PF00202 Aminotransferase class-III IRT44_RS13445 PF08970 Sporulation inhibitor A IRT44_RS13455 PF01546 Peptidase family M20/M25/M40 IRT44_RS13455 PF07687 Peptidase dimerisation domain IRT44_RS13460 PF03806 AbgT putative transporter family IRT44_RS13465 PF00155 Aminotransferase class I and II IRT44_RS13470 PF07408 Protein of unknown function (DUF1507) IRT44_RS13475 PF00209 Sodium:neurotransmitter symporter family IRT44_RS13485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_RS13490 PF01699 Sodium/calcium exchanger protein IRT44_RS13500 PF07486 Cell Wall Hydrolase IRT44_RS13500 PF01471 Putative peptidoglycan binding domain IRT44_RS13505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_RS13505 PF00205 Thiamine pyrophosphate enzyme, central domain IRT44_RS13505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IRT44_RS13515 PF01098 Cell cycle protein IRT44_RS13520 PF08868 YugN-like family IRT44_RS13525 PF00571 CBS domain IRT44_RS13530 PF13649 Methyltransferase domain IRT44_RS13535 PF00565 Staphylococcal nuclease homologue IRT44_RS13555 PF06133 Control of competence regulator ComK, YlbF/YmcA IRT44_RS13565 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) IRT44_RS13570 PF03746 LamB/YcsF family IRT44_RS13575 PF00005 ABC transporter IRT44_RS13575 PF03459 TOBE domain IRT44_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS13590 PF12728 Helix-turn-helix domain IRT44_RS13590 PF12727 PBP superfamily domain IRT44_RS13600 PF01202 Shikimate kinase IRT44_RS13605 PF14038 YqzE-like protein IRT44_RS13610 PF03698 Uncharacterised protein family (UPF0180) IRT44_RS13625 PF00271 Helicase conserved C-terminal domain IRT44_RS13625 PF00176 SNF2 family N-terminal domain IRT44_RS13630 PF01571 Aminomethyltransferase folate-binding domain IRT44_RS13630 PF08669 Glycine cleavage T-protein C-terminal barrel domain IRT44_RS13635 PF02347 Glycine cleavage system P-protein IRT44_RS13640 PF02347 Glycine cleavage system P-protein IRT44_RS13645 PF04072 Leucine carboxyl methyltransferase IRT44_RS13650 PF03099 Biotin/lipoate A/B protein ligase family IRT44_RS13655 PF01047 MarR family IRT44_RS13660 PF07690 Major Facilitator Superfamily IRT44_RS13665 PF01063 Amino-transferase class IV IRT44_RS13675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS13675 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS13675 PF00989 PAS fold IRT44_RS13675 PF13188 PAS domain IRT44_RS13675 PF13426 PAS domain IRT44_RS13685 PF03358 NADPH-dependent FMN reductase IRT44_RS13690 PF01325 Iron dependent repressor, N-terminal DNA binding domain IRT44_RS13690 PF02742 Iron dependent repressor, metal binding and dimerisation domain IRT44_RS13695 PF01734 Patatin-like phospholipase IRT44_RS13705 PF07136 Protein of unknown function (DUF1385) IRT44_RS13715 PF01220 Dehydroquinase class II IRT44_RS13720 PF01321 Creatinase/Prolidase N-terminal domain IRT44_RS13720 PF00557 Metallopeptidase family M24 IRT44_RS13725 PF08207 Elongation factor P (EF-P) KOW-like domain IRT44_RS13725 PF09285 Elongation factor P, C-terminal IRT44_RS13725 PF01132 Elongation factor P (EF-P) OB domain IRT44_RS13730 PF04284 Protein of unknown function (DUF441) IRT44_RS13735 PF04029 2-phosphosulpholactate phosphatase IRT44_RS13740 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) IRT44_RS13745 PF10942 Protein of unknown function (DUF2619) IRT44_RS13760 PF09548 Stage III sporulation protein AB (spore_III_AB) IRT44_RS13770 PF06686 Stage III sporulation protein AC/AD protein family IRT44_RS13775 PF09546 Stage III sporulation protein AE (spore_III_AE) IRT44_RS13780 PF09581 Stage III sporulation protein AF (Spore_III_AF) IRT44_RS13790 PF12685 SpoIIIAH-like protein IRT44_RS13795 PF00364 Biotin-requiring enzyme IRT44_RS13800 PF02785 Biotin carboxylase C-terminal domain IRT44_RS13800 PF00289 Biotin carboxylase, N-terminal domain IRT44_RS13800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_RS13805 PF03780 Asp23 family, cell envelope-related function IRT44_RS13820 PF01029 NusB family IRT44_RS13825 PF00814 Glycoprotease family IRT44_RS13830 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IRT44_RS13830 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IRT44_RS13835 PF13742 OB-fold nucleic acid binding domain IRT44_RS13835 PF02601 Exonuclease VII, large subunit IRT44_RS13845 PF00348 Polyprenyl synthetase IRT44_RS13850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IRT44_RS13850 PF02779 Transketolase, pyrimidine binding domain IRT44_RS13850 PF02780 Transketolase, C-terminal domain IRT44_RS13855 PF01479 S4 domain IRT44_RS13855 PF01728 FtsJ-like methyltransferase IRT44_RS13860 PF01513 ATP-NAD kinase IRT44_RS13865 PF01316 Arginine repressor, DNA binding domain IRT44_RS13865 PF02863 Arginine repressor, C-terminal domain IRT44_RS13870 PF13476 AAA domain IRT44_RS13875 PF17820 PDZ domain IRT44_RS13875 PF05580 SpoIVB peptidase S55 IRT44_RS13880 PF08769 Sporulation initiation factor Spo0A C terminal IRT44_RS13880 PF00072 Response regulator receiver domain IRT44_RS13885 PF13581 Histidine kinase-like ATPase domain IRT44_RS13890 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS13895 PF00484 Carbonic anhydrase IRT44_RS13900 PF10518 TAT (twin-arginine translocation) pathway signal sequence IRT44_RS13900 PF00149 Calcineurin-like phosphoesterase IRT44_RS13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS13905 PF03466 LysR substrate binding domain IRT44_RS13935 PF00535 Glycosyl transferase family 2 IRT44_RS13950 PF00158 Sigma-54 interaction domain IRT44_RS13950 PF02954 Bacterial regulatory protein, Fis family IRT44_RS13950 PF00989 PAS fold IRT44_RS13955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IRT44_RS13955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IRT44_RS13960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_RS13960 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS13965 PF00676 Dehydrogenase E1 component IRT44_RS13970 PF02780 Transketolase, C-terminal domain IRT44_RS13970 PF02779 Transketolase, pyrimidine binding domain IRT44_RS13975 PF02817 e3 binding domain IRT44_RS13975 PF00364 Biotin-requiring enzyme IRT44_RS13975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IRT44_RS13985 PF01642 Methylmalonyl-CoA mutase IRT44_RS13985 PF02310 B12 binding domain IRT44_RS13995 PF01039 Carboxyl transferase domain IRT44_RS14000 PF07687 Peptidase dimerisation domain IRT44_RS14000 PF01546 Peptidase family M20/M25/M40 IRT44_RS14010 PF00293 NUDIX domain IRT44_RS14020 PF01944 Stage II sporulation protein M IRT44_RS14025 PF01475 Ferric uptake regulator family IRT44_RS14030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IRT44_RS14030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IRT44_RS14040 PF00589 Phage integrase family IRT44_RS14040 PF02899 Phage integrase, N-terminal SAM-like domain IRT44_RS14045 PF01676 Metalloenzyme superfamily IRT44_RS14050 PF01048 Phosphorylase superfamily IRT44_RS14055 PF02885 Glycosyl transferase family, helical bundle domain IRT44_RS14055 PF00591 Glycosyl transferase family, a/b domain IRT44_RS14055 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IRT44_RS14065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_RS14070 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS14075 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS14075 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_RS14080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS14080 PF00005 ABC transporter IRT44_RS14085 PF00005 ABC transporter IRT44_RS14085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_RS14090 PF02743 Cache domain IRT44_RS14090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS14090 PF00672 HAMP domain IRT44_RS14095 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_RS14095 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_RS14100 PF01740 STAS domain IRT44_RS14105 PF13581 Histidine kinase-like ATPase domain IRT44_RS14110 PF04539 Sigma-70 region 3 IRT44_RS14110 PF04545 Sigma-70, region 4 IRT44_RS14110 PF04542 Sigma-70 region 2 IRT44_RS14115 PF12164 Stage V sporulation protein AA IRT44_RS14120 PF13782 Stage V sporulation protein AB IRT44_RS14125 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_RS14130 PF07451 Stage V sporulation protein AD (SpoVAD) IRT44_RS14135 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_RS14140 PF14097 Stage V sporulation protein AE1 IRT44_RS14145 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_RS14150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IRT44_RS14150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IRT44_RS14155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IRT44_RS14160 PF02163 Peptidase family M50 IRT44_RS14165 PF02616 Segregation and condensation protein ScpA IRT44_RS14170 PF04079 Segregation and condensation complex subunit ScpB IRT44_RS14175 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_RS14175 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_RS14180 PF07670 Nucleoside recognition IRT44_RS14185 PF07670 Nucleoside recognition IRT44_RS14190 PF00849 RNA pseudouridylate synthase IRT44_RS14190 PF01479 S4 domain IRT44_RS14195 PF00578 AhpC/TSA family IRT44_RS14200 PF05140 ResB-like family IRT44_RS14205 PF01578 Cytochrome C assembly protein IRT44_RS14210 PF00072 Response regulator receiver domain IRT44_RS14210 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS14215 PF18698 Histidine kinase sensor domain IRT44_RS14215 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS14215 PF00989 PAS fold IRT44_RS14215 PF00672 HAMP domain IRT44_RS14220 PF13419 Haloacid dehalogenase-like hydrolase IRT44_RS14225 PF03600 Citrate transporter IRT44_RS14230 PF01842 ACT domain IRT44_RS14230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_RS14230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_RS14235 PF00266 Aminotransferase class-V IRT44_RS14240 PF00719 Inorganic pyrophosphatase IRT44_RS14255 PF14493 Helix-turn-helix domain IRT44_RS14260 PF00270 DEAD/DEAH box helicase IRT44_RS14260 PF00271 Helicase conserved C-terminal domain IRT44_RS14285 PF05389 Negative regulator of genetic competence (MecA) IRT44_RS14290 PF02585 GlcNAc-PI de-N-acetylase IRT44_RS14295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IRT44_RS14295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IRT44_RS14300 PF00710 Asparaginase, N-terminal IRT44_RS14300 PF17763 Glutaminase/Asparaginase C-terminal domain IRT44_RS14305 PF13367 PrsW family intramembrane metalloprotease IRT44_RS14330 PF02224 Cytidylate kinase IRT44_RS14335 PF01553 Acyltransferase IRT44_RS14340 PF00575 S1 RNA binding domain IRT44_RS14345 PF01070 FMN-dependent dehydrogenase IRT44_RS14355 PF14045 YIEGIA protein IRT44_RS14365 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IRT44_RS14365 PF01926 50S ribosome-binding GTPase IRT44_RS14370 PF02660 Glycerol-3-phosphate acyltransferase IRT44_RS14375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IRT44_RS14375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IRT44_RS14410 PF09547 Stage IV sporulation protein A (spore_IV_A) IRT44_RS14415 PF00216 Bacterial DNA-binding protein IRT44_RS14420 PF01227 GTP cyclohydrolase I IRT44_RS14435 PF01464 Transglycosylase SLT domain IRT44_RS14440 PF02081 Tryptophan RNA-binding attenuator protein IRT44_RS14450 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 IRT44_RS14455 PF01209 ubiE/COQ5 methyltransferase family IRT44_RS14460 PF01040 UbiA prenyltransferase family IRT44_RS14465 PF02441 Flavoprotein IRT44_RS14475 PF00348 Polyprenyl synthetase IRT44_RS14480 PF00334 Nucleoside diphosphate kinase IRT44_RS14485 PF01739 CheR methyltransferase, SAM binding domain IRT44_RS14485 PF03705 CheR methyltransferase, all-alpha domain IRT44_RS14495 PF01264 Chorismate synthase IRT44_RS14500 PF01761 3-dehydroquinate synthase IRT44_RS14505 PF07736 Chorismate mutase type I IRT44_RS14510 PF00425 chorismate binding enzyme IRT44_RS14510 PF04715 Anthranilate synthase component I, N terminal region IRT44_RS14515 PF00591 Glycosyl transferase family, a/b domain IRT44_RS14515 PF02885 Glycosyl transferase family, helical bundle domain IRT44_RS14520 PF00218 Indole-3-glycerol phosphate synthase IRT44_RS14525 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IRT44_RS14530 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_RS14535 PF00290 Tryptophan synthase alpha chain IRT44_RS14540 PF00155 Aminotransferase class I and II IRT44_RS14550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_RS14555 PF01979 Amidohydrolase family IRT44_RS14560 PF08281 Sigma-70, region 4 IRT44_RS14560 PF04542 Sigma-70 region 2 IRT44_RS14590 PF00355 Rieske [2Fe-2S] domain IRT44_RS14595 PF00033 Cytochrome b/b6/petB IRT44_RS14600 PF00032 Cytochrome b(C-terminal)/b6/petD IRT44_RS14600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IRT44_RS14615 PF01645 Conserved region in glutamate synthase IRT44_RS14620 PF09844 Uncharacterized conserved protein (COG2071) IRT44_RS14625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_RS14625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_RS14630 PF03819 MazG nucleotide pyrophosphohydrolase domain IRT44_RS14635 PF01113 Dihydrodipicolinate reductase, N-terminus IRT44_RS14635 PF05173 Dihydrodipicolinate reductase, C-terminus IRT44_RS14640 PF02142 MGS-like domain IRT44_RS14645 PF02585 GlcNAc-PI de-N-acetylase IRT44_RS14650 PF13439 Glycosyltransferase Family 4 IRT44_RS14650 PF00534 Glycosyl transferases group 1 IRT44_RS14655 PF01743 Poly A polymerase head domain IRT44_RS14655 PF12627 Probable RNA and SrmB- binding site of polymerase A IRT44_RS14655 PF13735 tRNA nucleotidyltransferase domain 2 putative IRT44_RS14660 PF02237 Biotin protein ligase C terminal domain IRT44_RS14660 PF08279 HTH domain IRT44_RS14660 PF03099 Biotin/lipoate A/B protein ligase family IRT44_RS14665 PF02548 Ketopantoate hydroxymethyltransferase IRT44_RS14670 PF02569 Pantoate-beta-alanine ligase IRT44_RS14675 PF02261 Aspartate decarboxylase IRT44_RS14685 PF04851 Type III restriction enzyme, res subunit IRT44_RS14685 PF00929 Exonuclease IRT44_RS14685 PF13307 Helicase C-terminal domain IRT44_RS14695 PF02629 CoA binding domain IRT44_RS14695 PF06971 Putative DNA-binding protein N-terminus IRT44_RS14700 PF01979 Amidohydrolase family IRT44_RS14725 PF01434 Peptidase family M41 IRT44_RS14725 PF06480 FtsH Extracellular IRT44_RS14725 PF17862 AAA+ lid domain IRT44_RS14725 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS14735 PF00152 tRNA synthetases class II (D, K and N) IRT44_RS14735 PF01336 OB-fold nucleic acid binding domain IRT44_RS14740 PF07261 Replication initiation and membrane attachment IRT44_RS14750 PF00534 Glycosyl transferases group 1 IRT44_RS14755 PF00483 Nucleotidyl transferase IRT44_RS14760 PF00535 Glycosyl transferase family 2 IRT44_RS14765 PF00534 Glycosyl transferases group 1 IRT44_RS14765 PF13439 Glycosyltransferase Family 4 IRT44_RS14770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_RS14770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_RS14770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_RS14775 PF08439 Oligopeptidase F IRT44_RS14775 PF01432 Peptidase family M3 IRT44_RS14780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_RS14785 PF00873 AcrB/AcrD/AcrF family IRT44_RS14795 PF04461 Protein of unknown function (DUF520) IRT44_RS14805 PF13193 AMP-binding enzyme C-terminal domain IRT44_RS14805 PF00501 AMP-binding enzyme IRT44_RS14810 PF00694 Aconitase C-terminal domain IRT44_RS14815 PF00330 Aconitase family (aconitate hydratase) IRT44_RS14820 PF03466 LysR substrate binding domain IRT44_RS14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS14825 PF00085 Thioredoxin IRT44_RS14830 PF01479 S4 domain IRT44_RS14830 PF00849 RNA pseudouridylate synthase IRT44_RS14835 PF14398 YheC/D like ATP-grasp IRT44_RS14855 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS14855 PF00072 Response regulator receiver domain IRT44_RS14860 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS14860 PF16736 Single Cache-like IRT44_RS14860 PF00989 PAS fold IRT44_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS14865 PF17773 UPF0176 acylphosphatase like domain IRT44_RS14865 PF12368 Rhodanase C-terminal IRT44_RS14865 PF00581 Rhodanese-like domain IRT44_RS14890 PF00692 dUTPase IRT44_RS14895 PF03473 MOSC domain IRT44_RS14895 PF03475 3-alpha domain IRT44_RS14905 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS14910 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS14915 PF00005 ABC transporter IRT44_RS14915 PF17850 CysA C-terminal regulatory domain IRT44_RS14915 PF12857 TOBE-like domain IRT44_RS14920 PF12848 ABC transporter IRT44_RS14920 PF00005 ABC transporter IRT44_RS14925 PF13556 PucR C-terminal helix-turn-helix domain IRT44_RS14925 PF07905 Purine catabolism regulatory protein-like family IRT44_RS14925 PF17853 GGDEF-like domain IRT44_RS14930 PF11755 Protein of unknown function (DUF3311) IRT44_RS14935 PF00474 Sodium:solute symporter family IRT44_RS14940 PF07969 Amidohydrolase family IRT44_RS14950 PF00795 Carbon-nitrogen hydrolase IRT44_RS14950 PF00583 Acetyltransferase (GNAT) family IRT44_RS14970 PF02954 Bacterial regulatory protein, Fis family IRT44_RS14970 PF00989 PAS fold IRT44_RS14970 PF00158 Sigma-54 interaction domain IRT44_RS14975 PF00180 Isocitrate/isopropylmalate dehydrogenase IRT44_RS14980 PF00171 Aldehyde dehydrogenase family IRT44_RS14990 PF00005 ABC transporter IRT44_RS14995 PF00005 ABC transporter IRT44_RS15000 PF02361 Cobalt transport protein IRT44_RS15005 PF12822 ECF transporter, substrate-specific component IRT44_RS15010 PF07687 Peptidase dimerisation domain IRT44_RS15010 PF01546 Peptidase family M20/M25/M40 IRT44_RS15015 PF07690 Major Facilitator Superfamily IRT44_RS15020 PF01432 Peptidase family M3 IRT44_RS15020 PF08439 Oligopeptidase F IRT44_RS15040 PF00535 Glycosyl transferase family 2 IRT44_RS15045 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS15045 PF00072 Response regulator receiver domain IRT44_RS15050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_RS15050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_RS15050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_RS15060 PF00877 NlpC/P60 family IRT44_RS15060 PF01476 LysM domain IRT44_RS15090 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_RS15095 PF00877 NlpC/P60 family IRT44_RS15105 PF13495 Phage integrase, N-terminal SAM-like domain IRT44_RS15105 PF00589 Phage integrase family IRT44_RS15110 PF00155 Aminotransferase class I and II IRT44_RS15115 PF01370 NAD dependent epimerase/dehydratase family IRT44_RS15120 PF00395 S-layer homology domain IRT44_RS15130 PF01230 HIT domain IRT44_RS15135 PF00037 4Fe-4S binding domain IRT44_RS15135 PF00384 Molybdopterin oxidoreductase IRT44_RS15135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IRT44_RS15135 PF01568 Molydopterin dinucleotide binding domain IRT44_RS15135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IRT44_RS15140 PF07849 Protein of unknown function (DUF1641) IRT44_RS15145 PF10057 Uncharacterized conserved protein (DUF2294) IRT44_RS15150 PF07075 Protein of unknown function (DUF1343) IRT44_RS15155 PF00144 Beta-lactamase IRT44_RS15160 PF00933 Glycosyl hydrolase family 3 N terminal domain IRT44_RS15160 PF01915 Glycosyl hydrolase family 3 C-terminal domain IRT44_RS15170 PF13840 ACT domain IRT44_RS15170 PF00696 Amino acid kinase family IRT44_RS15175 PF07690 Major Facilitator Superfamily IRT44_RS15185 PF01048 Phosphorylase superfamily IRT44_RS15200 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_RS15200 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_RS15205 PF04607 Region found in RelA / SpoT proteins IRT44_RS15215 PF00269 Small, acid-soluble spore proteins, alpha/beta type IRT44_RS15220 PF01367 5'-3' exonuclease, C-terminal SAM fold IRT44_RS15220 PF00476 DNA polymerase family A IRT44_RS15220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IRT44_RS15230 PF07728 AAA domain (dynein-related subfamily) IRT44_RS15230 PF17868 AAA lid domain IRT44_RS15230 PF12592 Protein of unknown function (DUF3763) IRT44_RS15260 PF00324 Amino acid permease IRT44_RS15280 PF00188 Cysteine-rich secretory protein family IRT44_RS15285 PF01327 Polypeptide deformylase IRT44_RS15300 PF01047 MarR family IRT44_RS15310 PF04235 Protein of unknown function (DUF418) IRT44_RS15315 PF05525 Branched-chain amino acid transport protein IRT44_RS15325 PF00860 Permease family IRT44_RS15330 PF07286 Protein of unknown function (DUF1445) IRT44_RS15340 PF03746 LamB/YcsF family IRT44_RS15345 PF02626 Carboxyltransferase domain, subdomain A and B IRT44_RS15350 PF02682 Carboxyltransferase domain, subdomain C and D IRT44_RS15360 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IRT44_RS15365 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IRT44_RS15370 PF13439 Glycosyltransferase Family 4 IRT44_RS15370 PF00534 Glycosyl transferases group 1 IRT44_RS15375 PF09084 NMT1/THI5 like IRT44_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS15385 PF00005 ABC transporter IRT44_RS15390 PF03070 TENA/THI-4/PQQC family IRT44_RS15395 PF07687 Peptidase dimerisation domain IRT44_RS15395 PF01546 Peptidase family M20/M25/M40 IRT44_RS15400 PF05690 Thiazole biosynthesis protein ThiG IRT44_RS15405 PF02597 ThiS family IRT44_RS15415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IRT44_RS15415 PF01411 tRNA synthetases class II (A) IRT44_RS15415 PF02272 DHHA1 domain IRT44_RS15425 PF00704 Glycosyl hydrolases family 18 IRT44_RS15425 PF01476 LysM domain IRT44_RS15435 PF00171 Aldehyde dehydrogenase family IRT44_RS15465 PF00963 Cohesin domain IRT44_RS15465 PF00395 S-layer homology domain IRT44_RS15490 PF00465 Iron-containing alcohol dehydrogenase IRT44_RS15540 PF09587 Bacterial capsule synthesis protein PGA_cap IRT44_RS15545 PF00578 AhpC/TSA family IRT44_RS15550 PF02683 Cytochrome C biogenesis protein transmembrane region IRT44_RS15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS15555 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS15555 PF00989 PAS fold IRT44_RS15560 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IRT44_RS15570 PF02581 Thiamine monophosphate synthase IRT44_RS15575 PF02581 Thiamine monophosphate synthase IRT44_RS15595 PF01970 Tripartite tricarboxylate transporter TctA family IRT44_RS15605 PF03401 Tripartite tricarboxylate transporter family receptor IRT44_RS15610 PF12431 Transcriptional regulator IRT44_RS15610 PF00072 Response regulator receiver domain IRT44_RS15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS15615 PF00989 PAS fold IRT44_RS15615 PF17203 Single cache domain 3 IRT44_RS15615 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_RS15620 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IRT44_RS15625 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IRT44_RS15630 PF00672 HAMP domain IRT44_RS15630 PF12729 Four helix bundle sensory module for signal transduction IRT44_RS15630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS15645 PF00795 Carbon-nitrogen hydrolase IRT44_RS15650 PF01979 Amidohydrolase family IRT44_RS15655 PF01180 Dihydroorotate dehydrogenase IRT44_RS15660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IRT44_RS15660 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS15680 PF12833 Helix-turn-helix domain IRT44_RS15680 PF06445 GyrI-like small molecule binding domain IRT44_RS15685 PF00202 Aminotransferase class-III IRT44_RS15690 PF00171 Aldehyde dehydrogenase family IRT44_RS15705 PF00082 Subtilase family IRT44_RS15710 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS15710 PF17866 AAA lid domain IRT44_RS15725 PF03989 DNA gyrase C-terminal domain, beta-propeller IRT44_RS15725 PF00521 DNA gyrase/topoisomerase IV, subunit A IRT44_RS15730 PF01751 Toprim domain IRT44_RS15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS15730 PF00986 DNA gyrase B subunit, carboxyl terminus IRT44_RS15730 PF00204 DNA gyrase B IRT44_RS15735 PF01709 Transcriptional regulator IRT44_RS15740 PF00899 ThiF family IRT44_RS15760 PF00989 PAS fold IRT44_RS15760 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS15760 PF13426 PAS domain IRT44_RS15760 PF13188 PAS domain IRT44_RS15765 PF08338 Domain of unknown function (DUF1731) IRT44_RS15765 PF01370 NAD dependent epimerase/dehydratase family IRT44_RS15780 PF00005 ABC transporter IRT44_RS15800 PF04542 Sigma-70 region 2 IRT44_RS15800 PF08281 Sigma-70, region 4 IRT44_RS15805 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_RS15810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IRT44_RS15815 PF07486 Cell Wall Hydrolase IRT44_RS15815 PF01471 Putative peptidoglycan binding domain IRT44_RS15825 PF04284 Protein of unknown function (DUF441) IRT44_RS15840 PF10720 Protein of unknown function (DUF2515) IRT44_RS15850 PF07285 Protein of unknown function (DUF1444) IRT44_RS15855 PF13037 Domain of unknown function (DUF3898) IRT44_RS15855 PF13039 Protein of unknown function (DUF3900) IRT44_RS15860 PF00069 Protein kinase domain IRT44_RS15870 PF00271 Helicase conserved C-terminal domain IRT44_RS15870 PF00270 DEAD/DEAH box helicase IRT44_RS15880 PF12708 Pectate lyase superfamily protein IRT44_RS15880 PF09992 Phosphodiester glycosidase IRT44_RS15905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_RS15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS15910 PF02817 e3 binding domain IRT44_RS15910 PF00364 Biotin-requiring enzyme IRT44_RS15910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IRT44_RS15915 PF02779 Transketolase, pyrimidine binding domain IRT44_RS15915 PF02780 Transketolase, C-terminal domain IRT44_RS15920 PF00676 Dehydrogenase E1 component IRT44_RS15935 PF13520 Amino acid permease IRT44_RS15945 PF01521 Iron-sulphur cluster biosynthesis IRT44_RS15950 PF13538 UvrD-like helicase C-terminal domain IRT44_RS15955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IRT44_RS15960 PF05979 Bacterial protein of unknown function (DUF896) IRT44_RS15970 PF00717 Peptidase S24-like IRT44_RS15970 PF01726 LexA DNA binding domain IRT44_RS15990 PF03951 Glutamine synthetase, beta-Grasp domain IRT44_RS15990 PF00120 Glutamine synthetase, catalytic domain IRT44_RS15995 PF13411 MerR HTH family regulatory protein IRT44_RS16000 PF06838 Methionine gamma-lyase IRT44_RS16005 PF16360 GTP-binding GTPase Middle Region IRT44_RS16005 PF13167 GTP-binding GTPase N-terminal IRT44_RS16005 PF01926 50S ribosome-binding GTPase IRT44_RS16010 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS16010 PF17866 AAA lid domain IRT44_RS16020 PF17209 Hfq protein IRT44_RS16030 PF04445 Putative SAM-dependent methyltransferase IRT44_RS16035 PF08676 MutL C terminal dimerisation domain IRT44_RS16035 PF01119 DNA mismatch repair protein, C-terminal domain IRT44_RS16040 PF01624 MutS domain I IRT44_RS16040 PF05192 MutS domain III IRT44_RS16040 PF05190 MutS family domain IV IRT44_RS16040 PF00488 MutS domain V IRT44_RS16050 PF10628 Outer spore coat protein E (CotE) IRT44_RS16055 PF06133 Control of competence regulator ComK, YlbF/YmcA IRT44_RS16060 PF00919 Uncharacterized protein family UPF0004 IRT44_RS16060 PF01938 TRAM domain IRT44_RS16060 PF04055 Radical SAM superfamily IRT44_RS16065 PF00395 S-layer homology domain IRT44_RS16065 PF00963 Cohesin domain IRT44_RS16070 PF03099 Biotin/lipoate A/B protein ligase family IRT44_RS16090 PF06962 Putative rRNA methylase IRT44_RS16095 PF12706 Beta-lactamase superfamily domain IRT44_RS16105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_RS16110 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IRT44_RS16110 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IRT44_RS16110 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IRT44_RS16115 PF01244 Membrane dipeptidase (Peptidase family M19) IRT44_RS16120 PF04232 Stage V sporulation protein S (SpoVS) IRT44_RS16125 PF13277 YmdB-like protein IRT44_RS16130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS16135 PF00013 KH domain IRT44_RS16135 PF12072 Domain of unknown function (DUF3552) IRT44_RS16135 PF01966 HD domain IRT44_RS16140 PF02631 RecX family IRT44_RS16145 PF00154 recA bacterial DNA recombination protein IRT44_RS16150 PF00270 DEAD/DEAH box helicase IRT44_RS16150 PF00271 Helicase conserved C-terminal domain IRT44_RS16155 PF02464 Competence-damaged protein IRT44_RS16155 PF18146 Damage-inducible protein CinA KH domain IRT44_RS16155 PF00994 Probable molybdopterin binding domain IRT44_RS16160 PF01066 CDP-alcohol phosphatidyltransferase IRT44_RS16165 PF00919 Uncharacterized protein family UPF0004 IRT44_RS16165 PF18693 TRAM domain IRT44_RS16165 PF04055 Radical SAM superfamily IRT44_RS16170 PF13464 Domain of unknown function (DUF4115) IRT44_RS16175 PF11868 Protein of unknown function (DUF3388) IRT44_RS16180 PF11588 Protein of unknown function (DUF3243) IRT44_RS16190 PF00675 Insulinase (Peptidase family M16) IRT44_RS16190 PF05193 Peptidase M16 inactive domain IRT44_RS16195 PF05193 Peptidase M16 inactive domain IRT44_RS16205 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS16210 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS16215 PF00005 ABC transporter IRT44_RS16220 PF02608 ABC transporter substrate-binding protein PnrA-like IRT44_RS16225 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS16225 PF07702 UTRA domain IRT44_RS16240 PF00574 Clp protease IRT44_RS16250 PF00753 Metallo-beta-lactamase superfamily IRT44_RS16250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IRT44_RS16250 PF17770 Ribonuclease J C-terminal domain IRT44_RS16255 PF00701 Dihydrodipicolinate synthetase family IRT44_RS16260 PF00696 Amino acid kinase family IRT44_RS16260 PF13840 ACT domain IRT44_RS16265 PF01118 Semialdehyde dehydrogenase, NAD binding domain IRT44_RS16265 PF02774 Semialdehyde dehydrogenase, dimerisation domain IRT44_RS16270 PF02441 Flavoprotein IRT44_RS16275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IRT44_RS16275 PF16924 Dipicolinate synthase subunit A N-terminal domain IRT44_RS16280 PF05239 PRC-barrel domain IRT44_RS16285 PF00675 Insulinase (Peptidase family M16) IRT44_RS16285 PF05193 Peptidase M16 inactive domain IRT44_RS16290 PF01522 Polysaccharide deacetylase IRT44_RS16295 PF00013 KH domain IRT44_RS16295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IRT44_RS16295 PF01138 3' exoribonuclease family, domain 1 IRT44_RS16295 PF03725 3' exoribonuclease family, domain 2 IRT44_RS16295 PF00575 S1 RNA binding domain IRT44_RS16300 PF00312 Ribosomal protein S15 IRT44_RS16305 PF06574 FAD synthetase IRT44_RS16305 PF01687 Riboflavin kinase IRT44_RS16310 PF16198 tRNA pseudouridylate synthase B C-terminal domain IRT44_RS16310 PF01509 TruB family pseudouridylate synthase (N terminal domain) IRT44_RS16315 PF01368 DHH family IRT44_RS16315 PF02272 DHHA1 domain IRT44_RS16320 PF02033 Ribosome-binding factor A IRT44_RS16330 PF00009 Elongation factor Tu GTP binding domain IRT44_RS16330 PF11987 Translation-initiation factor 2 IRT44_RS16330 PF04760 Translation initiation factor IF-2, N-terminal region IRT44_RS16335 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family IRT44_RS16340 PF04296 Protein of unknown function (DUF448) IRT44_RS16345 PF00575 S1 RNA binding domain IRT44_RS16345 PF08529 NusA N-terminal domain IRT44_RS16345 PF13184 NusA-like KH domain IRT44_RS16350 PF02576 RimP N-terminal domain IRT44_RS16350 PF17384 RimP C-terminal SH3 domain IRT44_RS16355 PF14480 DNA polymerase III polC-type N-terminus I IRT44_RS16355 PF07733 Bacterial DNA polymerase III alpha NTPase domain IRT44_RS16355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IRT44_RS16355 PF14579 Helix-hairpin-helix motif IRT44_RS16355 PF00929 Exonuclease IRT44_RS16355 PF11490 DNA polymerase III polC-type N-terminus II IRT44_RS16355 PF02811 PHP domain IRT44_RS16360 PF03129 Anticodon binding domain IRT44_RS16360 PF04073 Aminoacyl-tRNA editing domain IRT44_RS16360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_RS16365 PF04551 GcpE protein IRT44_RS16370 PF02163 Peptidase family M50 IRT44_RS16370 PF13180 PDZ domain IRT44_RS16375 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IRT44_RS16375 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IRT44_RS16375 PF13288 DXP reductoisomerase C-terminal domain IRT44_RS16385 PF01255 Putative undecaprenyl diphosphate synthase IRT44_RS16390 PF01765 Ribosome recycling factor IRT44_RS16395 PF00696 Amino acid kinase family IRT44_RS16400 PF00889 Elongation factor TS IRT44_RS16405 PF00318 Ribosomal protein S2 IRT44_RS16430 PF04542 Sigma-70 region 2 IRT44_RS16430 PF04539 Sigma-70 region 3 IRT44_RS16430 PF04545 Sigma-70, region 4 IRT44_RS16440 PF03975 CheD chemotactic sensory transduction IRT44_RS16445 PF04509 CheC-like family IRT44_RS16450 PF01584 CheW-like domain IRT44_RS16455 PF01584 CheW-like domain IRT44_RS16455 PF02895 Signal transducing histidine kinase, homodimeric domain IRT44_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS16455 PF01627 Hpt domain IRT44_RS16455 PF07194 P2 response regulator binding domain IRT44_RS16460 PF01339 CheB methylesterase IRT44_RS16460 PF00072 Response regulator receiver domain IRT44_RS16465 PF10609 NUBPL iron-transfer P-loop NTPase IRT44_RS16470 PF00448 SRP54-type protein, GTPase domain IRT44_RS16475 PF00771 FHIPEP family IRT44_RS16480 PF01312 FlhB HrpN YscU SpaS Family IRT44_RS16485 PF01311 Bacterial export proteins, family 1 IRT44_RS16490 PF01313 Bacterial export proteins, family 3 IRT44_RS16500 PF04347 Flagellar biosynthesis protein, FliO IRT44_RS16505 PF00072 Response regulator receiver domain IRT44_RS16510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IRT44_RS16510 PF04509 CheC-like family IRT44_RS16515 PF02154 Flagellar motor switch protein FliM IRT44_RS16515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IRT44_RS16530 PF00460 Flagella basal body rod protein IRT44_RS16530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_RS16550 PF02050 Flagellar FliJ protein IRT44_RS16555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_RS16555 PF02874 ATP synthase alpha/beta family, beta-barrel domain IRT44_RS16555 PF18269 T3SS EscN ATPase C-terminal domain IRT44_RS16565 PF14842 FliG N-terminal domain IRT44_RS16565 PF14841 FliG middle domain IRT44_RS16565 PF01706 FliG C-terminal domain IRT44_RS16570 PF01514 Secretory protein of YscJ/FliF family IRT44_RS16570 PF08345 Flagellar M-ring protein C-terminal IRT44_RS16575 PF02049 Flagellar hook-basal body complex protein FliE IRT44_RS16580 PF00460 Flagella basal body rod protein IRT44_RS16580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_RS16585 PF00460 Flagella basal body rod protein IRT44_RS16590 PF08222 CodY helix-turn-helix domain IRT44_RS16590 PF06018 CodY GAF-like domain IRT44_RS16595 PF07724 AAA domain (Cdc48 subfamily) IRT44_RS16595 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_RS16595 PF10431 C-terminal, D2-small domain, of ClpB protein IRT44_RS16600 PF00227 Proteasome subunit IRT44_RS16605 PF02899 Phage integrase, N-terminal SAM-like domain IRT44_RS16605 PF00589 Phage integrase family IRT44_RS16610 PF01134 Glucose inhibited division protein A IRT44_RS16615 PF01131 DNA topoisomerase IRT44_RS16615 PF01751 Toprim domain IRT44_RS16615 PF01396 Topoisomerase DNA binding C4 zinc finger IRT44_RS16620 PF02481 DNA recombination-mediator protein A IRT44_RS16620 PF17782 DprA winged helix domain IRT44_RS16625 PF02629 CoA binding domain IRT44_RS16625 PF00549 CoA-ligase IRT44_RS16630 PF08442 ATP-grasp domain IRT44_RS16630 PF00549 CoA-ligase IRT44_RS16640 PF01906 Putative heavy-metal-binding IRT44_RS16650 PF01380 SIS domain IRT44_RS16650 PF01418 Helix-turn-helix domain, rpiR family IRT44_RS16660 PF13171 Protein of unknown function (DUF4004) IRT44_RS16680 PF09339 IclR helix-turn-helix domain IRT44_RS16680 PF01614 Bacterial transcriptional regulator IRT44_RS16695 PF00294 pfkB family carbohydrate kinase IRT44_RS16705 PF00920 Dehydratase family IRT44_RS16710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IRT44_RS16710 PF13378 Enolase C-terminal domain-like IRT44_RS16720 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_RS16725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_RS16725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_RS16725 PF01842 ACT domain IRT44_RS16730 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_RS16735 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IRT44_RS16740 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_RS16745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_RS16745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_RS16750 PF07690 Major Facilitator Superfamily IRT44_RS16755 PF01256 Carbohydrate kinase IRT44_RS16755 PF03853 YjeF-related protein N-terminus IRT44_RS16760 PF01223 DNA/RNA non-specific endonuclease IRT44_RS16785 PF03992 Antibiotic biosynthesis monooxygenase IRT44_RS16790 PF00756 Putative esterase IRT44_RS16795 PF01032 FecCD transport family IRT44_RS16800 PF01032 FecCD transport family IRT44_RS16805 PF01497 Periplasmic binding protein IRT44_RS16810 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_RS16825 PF13386 Cytochrome C biogenesis protein transmembrane region IRT44_RS16830 PF00384 Molybdopterin oxidoreductase IRT44_RS16830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IRT44_RS16830 PF01568 Molydopterin dinucleotide binding domain IRT44_RS16835 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_RS16840 PF02652 L-lactate permease IRT44_RS16850 PF02754 Cysteine-rich domain IRT44_RS16850 PF13183 4Fe-4S dicluster domain IRT44_RS16855 PF01565 FAD binding domain IRT44_RS16855 PF02913 FAD linked oxidases, C-terminal domain IRT44_RS16860 PF07729 FCD domain IRT44_RS16860 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS16865 PF01274 Malate synthase IRT44_RS16890 PF01266 FAD dependent oxidoreductase IRT44_RS16945 PF01523 Putative modulator of DNA gyrase IRT44_RS16950 PF01523 Putative modulator of DNA gyrase IRT44_RS16960 PF03358 NADPH-dependent FMN reductase IRT44_RS16980 PF06445 GyrI-like small molecule binding domain IRT44_RS16980 PF12833 Helix-turn-helix domain IRT44_RS16985 PF07883 Cupin domain IRT44_RS16990 PF04199 Putative cyclase IRT44_RS16995 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IRT44_RS16995 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IRT44_RS17000 PF01645 Conserved region in glutamate synthase IRT44_RS17000 PF13187 4Fe-4S dicluster domain IRT44_RS17005 PF00005 ABC transporter IRT44_RS17030 PF01810 LysE type translocator IRT44_RS17040 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS17040 PF00155 Aminotransferase class I and II IRT44_RS17050 PF00005 ABC transporter IRT44_RS17050 PF00005 ABC transporter IRT44_RS17050 PF16326 ABC transporter C-terminal domain IRT44_RS17050 PF16326 ABC transporter C-terminal domain IRT44_RS17050 PF12848 ABC transporter IRT44_RS17050 PF12848 ABC transporter IRT44_RS17055 PF02557 D-alanyl-D-alanine carboxypeptidase IRT44_RS17060 PF01427 D-ala-D-ala dipeptidase IRT44_RS17065 PF01820 D-ala D-ala ligase N-terminus IRT44_RS17065 PF07478 D-ala D-ala ligase C-terminus IRT44_RS17070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_RS17070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS17075 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS17080 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS17080 PF00072 Response regulator receiver domain IRT44_RS17090 PF13520 Amino acid permease IRT44_RS17095 PF12833 Helix-turn-helix domain IRT44_RS17095 PF02805 Metal binding domain of Ada IRT44_RS17105 PF00872 Transposase, Mutator family IRT44_RS17110 PF01966 HD domain IRT44_RS17110 PF13286 Phosphohydrolase-associated domain IRT44_RS17135 PF02586 SOS response associated peptidase (SRAP) IRT44_RS17140 PF00557 Metallopeptidase family M24 IRT44_RS17145 PF00294 pfkB family carbohydrate kinase IRT44_RS17150 PF00251 Glycosyl hydrolases family 32 N-terminal domain IRT44_RS17150 PF08244 Glycosyl hydrolases family 32 C terminal IRT44_RS17155 PF00367 phosphotransferase system, EIIB IRT44_RS17155 PF02378 Phosphotransferase system, EIIC IRT44_RS17160 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS17160 PF13407 Periplasmic binding protein domain IRT44_RS17165 PF00850 Histone deacetylase domain IRT44_RS17170 PF07690 Major Facilitator Superfamily IRT44_RS17175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IRT44_RS17175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IRT44_RS17190 PF00202 Aminotransferase class-III IRT44_RS17195 PF17329 Family of unknown function (DUF5367) IRT44_RS17200 PF00440 Bacterial regulatory proteins, tetR family IRT44_RS17235 PF00583 Acetyltransferase (GNAT) family IRT44_RS17245 PF12833 Helix-turn-helix domain IRT44_RS17245 PF06445 GyrI-like small molecule binding domain IRT44_RS17250 PF07732 Multicopper oxidase IRT44_RS17250 PF07731 Multicopper oxidase IRT44_RS17250 PF00394 Multicopper oxidase IRT44_RS17255 PF00672 HAMP domain IRT44_RS17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_RS17255 PF00512 His Kinase A (phospho-acceptor) domain IRT44_RS17260 PF00486 Transcriptional regulatory protein, C terminal IRT44_RS17260 PF00072 Response regulator receiver domain IRT44_RS17265 PF07690 Major Facilitator Superfamily IRT44_RS17275 PF01757 Acyltransferase family IRT44_RS17280 PF01757 Acyltransferase family IRT44_RS17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS17285 PF03466 LysR substrate binding domain IRT44_RS17295 PF01695 IstB-like ATP binding protein IRT44_RS17300 PF00665 Integrase core domain IRT44_RS17300 PF02796 Helix-turn-helix domain of resolvase IRT44_RS17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_RS17310 PF03466 LysR substrate binding domain IRT44_RS17315 PF02423 Ornithine cyclodeaminase/mu-crystallin family IRT44_RS17320 PF00155 Aminotransferase class I and II IRT44_RS17325 PF02583 Metal-sensitive transcriptional repressor IRT44_RS17330 PF13686 DsrE/DsrF/DrsH-like family IRT44_RS17335 PF01206 Sulfurtransferase TusA IRT44_RS17340 PF00753 Metallo-beta-lactamase superfamily IRT44_RS17340 PF00581 Rhodanese-like domain IRT44_RS17345 PF00581 Rhodanese-like domain IRT44_RS17345 PF01206 Sulfurtransferase TusA IRT44_RS17350 PF01925 Sulfite exporter TauE/SafE IRT44_RS17380 PF01883 Iron-sulfur cluster assembly protein IRT44_RS17385 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_RS17390 PF00325 Bacterial regulatory proteins, crp family IRT44_RS17390 PF00027 Cyclic nucleotide-binding domain IRT44_RS17400 PF04343 Protein of unknown function, DUF488 IRT44_RS17410 PF01078 Magnesium chelatase, subunit ChlI IRT44_RS17410 PF13335 Magnesium chelatase, subunit ChlI C-terminal IRT44_RS17415 PF02021 Uncharacterised protein family UPF0102 IRT44_RS17420 PF01312 FlhB HrpN YscU SpaS Family IRT44_RS17430 PF01351 Ribonuclease HII IRT44_RS17435 PF01926 50S ribosome-binding GTPase IRT44_RS17440 PF10502 Signal peptidase, peptidase S26 IRT44_RS17445 PF01245 Ribosomal protein L19 IRT44_RS17450 PF01746 tRNA (Guanine-1)-methyltransferase IRT44_RS17455 PF05239 PRC-barrel domain IRT44_RS17455 PF01782 RimM N-terminal domain IRT44_RS17460 PF11068 YlqD protein IRT44_RS17470 PF00886 Ribosomal protein S16 IRT44_RS17475 PF00448 SRP54-type protein, GTPase domain IRT44_RS17475 PF02881 SRP54-type protein, helical bundle domain IRT44_RS17475 PF02978 Signal peptide binding domain IRT44_RS17480 PF04297 Putative helix-turn-helix protein, YlxM / p13 like IRT44_RS17500 PF00005 ABC transporter IRT44_RS17525 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_RS17530 PF00448 SRP54-type protein, GTPase domain IRT44_RS17530 PF02881 SRP54-type protein, helical bundle domain IRT44_RS17535 PF06470 SMC proteins Flexible Hinge Domain IRT44_RS17535 PF02463 RecF/RecN/SMC N terminal domain IRT44_RS17540 PF00120 Glutamine synthetase, catalytic domain IRT44_RS17545 PF00324 Amino acid permease IRT44_RS17555 PF00158 Sigma-54 interaction domain IRT44_RS17555 PF13426 PAS domain IRT44_RS17555 PF02954 Bacterial regulatory protein, Fis family IRT44_RS17560 PF14622 Ribonuclease-III-like IRT44_RS17560 PF00035 Double-stranded RNA binding motif IRT44_RS17565 PF02801 Beta-ketoacyl synthase, C-terminal domain IRT44_RS17565 PF00109 Beta-ketoacyl synthase, N-terminal domain IRT44_RS17570 PF00550 Phosphopantetheine attachment site IRT44_RS17580 PF00698 Acyl transferase domain IRT44_RS17585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IRT44_RS17585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IRT44_RS17590 PF02504 Fatty acid synthesis protein IRT44_RS17595 PF03061 Thioesterase superfamily IRT44_RS17600 PF01783 Ribosomal L32p protein family IRT44_RS17610 PF05362 Lon protease (S16) C-terminal proteolytic domain IRT44_RS17610 PF13180 PDZ domain IRT44_RS17615 PF01734 Patatin-like phospholipase IRT44_RS17620 PF07670 Nucleoside recognition IRT44_RS17625 PF01467 Cytidylyltransferase-like IRT44_RS17640 PF13302 Acetyltransferase (GNAT) domain IRT44_RS17650 PF02735 Ku70/Ku80 beta-barrel domain IRT44_RS17665 PF01545 Cation efflux family IRT44_RS17665 PF16916 Dimerisation domain of Zinc Transporter IRT44_RS17670 PF13667 ThiC-associated domain IRT44_RS17670 PF01964 Radical SAM ThiC family IRT44_RS17680 PF04679 ATP dependent DNA ligase C terminal region IRT44_RS17680 PF01068 ATP dependent DNA ligase domain IRT44_RS17695 PF05504 Spore germination B3/ GerAC like, C-terminal IRT44_RS17700 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_RS17705 PF04679 ATP dependent DNA ligase C terminal region IRT44_RS17705 PF01068 ATP dependent DNA ligase domain IRT44_RS17705 PF13298 DNA polymerase Ligase (LigD) IRT44_RS17710 PF01790 Prolipoprotein diacylglyceryl transferase IRT44_RS17720 PF07836 DmpG-like communication domain IRT44_RS17720 PF00682 HMGL-like IRT44_RS17725 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation IRT44_RS17725 PF01118 Semialdehyde dehydrogenase, NAD binding domain IRT44_RS17730 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_RS17735 PF00171 Aldehyde dehydrogenase family IRT44_RS17740 PF01042 Endoribonuclease L-PSP IRT44_RS17750 PF06052 3-hydroxyanthranilic acid dioxygenase IRT44_RS17755 PF01361 Tautomerase enzyme IRT44_RS17760 PF03358 NADPH-dependent FMN reductase IRT44_RS17765 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal IRT44_RS17765 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal IRT44_RS17775 PF00672 HAMP domain IRT44_RS17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_RS17775 PF02743 Cache domain IRT44_RS17795 PF01384 Phosphate transporter family IRT44_RS17805 PF08448 PAS fold IRT44_RS17805 PF00990 Diguanylate cyclase, GGDEF domain IRT44_RS17810 PF07690 Major Facilitator Superfamily IRT44_RS17815 PF00195 Chalcone and stilbene synthases, N-terminal domain IRT44_RS17815 PF02797 Chalcone and stilbene synthases, C-terminal domain IRT44_RS17820 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family IRT44_RS17835 PF01047 MarR family IRT44_RS17840 PF10502 Signal peptidase, peptidase S26 IRT44_RS17855 PF08281 Sigma-70, region 4 IRT44_RS17855 PF04542 Sigma-70 region 2 IRT44_RS17860 PF02557 D-alanyl-D-alanine carboxypeptidase IRT44_RS17870 PF12708 Pectate lyase superfamily protein IRT44_RS17870 PF09992 Phosphodiester glycosidase IRT44_RS17895 PF17863 AAA lid domain IRT44_RS17895 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_RS17920 PF00534 Glycosyl transferases group 1 IRT44_RS17920 PF13439 Glycosyltransferase Family 4 IRT44_RS17925 PF01636 Phosphotransferase enzyme family IRT44_RS17935 PF01370 NAD dependent epimerase/dehydratase family IRT44_RS17950 PF11007 Spore coat associated protein JA (CotJA) IRT44_RS17955 PF05067 Manganese containing catalase IRT44_RS17980 PF00817 impB/mucB/samB family IRT44_RS17980 PF11799 impB/mucB/samB family C-terminal domain IRT44_RS17995 PF00270 DEAD/DEAH box helicase IRT44_RS17995 PF00271 Helicase conserved C-terminal domain IRT44_RS17995 PF17191 RecG wedge domain IRT44_RS18000 PF03313 Serine dehydratase alpha chain IRT44_RS18005 PF01842 ACT domain IRT44_RS18005 PF03315 Serine dehydratase beta chain IRT44_RS18010 PF02645 Uncharacterised protein, DegV family COG1307 IRT44_RS18015 PF13684 Dihydroxyacetone kinase family IRT44_RS18015 PF02734 DAK2 domain IRT44_RS18020 PF03780 Asp23 family, cell envelope-related function IRT44_RS18025 PF00830 Ribosomal L28 family IRT44_RS18030 PF08183 Stage V sporulation protein family IRT44_RS18035 PF09515 Thiamine transporter protein (Thia_YuaJ) IRT44_RS18040 PF00005 ABC transporter IRT44_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_RS18050 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_RS18055 PF01546 Peptidase family M20/M25/M40 IRT44_RS18055 PF07687 Peptidase dimerisation domain IRT44_RS18065 PF00834 Ribulose-phosphate 3 epimerase family IRT44_RS18070 PF03193 RsgA GTPase IRT44_RS18070 PF16745 RsgA N-terminal domain IRT44_RS18075 PF00069 Protein kinase domain IRT44_RS18075 PF03793 PASTA domain IRT44_RS18085 PF04055 Radical SAM superfamily IRT44_RS18090 PF01029 NusB family IRT44_RS18090 PF01189 16S rRNA methyltransferase RsmB/F IRT44_RS18095 PF00551 Formyl transferase IRT44_RS18095 PF02911 Formyl transferase, C-terminal domain IRT44_RS18100 PF01327 Polypeptide deformylase IRT44_RS18105 PF17764 3′ DNA-binding domain (3′BD) IRT44_RS18105 PF00271 Helicase conserved C-terminal domain IRT44_RS18105 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IRT44_RS18105 PF04851 Type III restriction enzyme, res subunit IRT44_RS18105 PF18074 Primosomal protein N C-terminal domain IRT44_RS18110 PF04127 DNA / pantothenate metabolism flavoprotein IRT44_RS18110 PF02441 Flavoprotein IRT44_RS18115 PF01192 RNA polymerase Rpb6 IRT44_RS18120 PF00625 Guanylate kinase IRT44_RS18125 PF04025 Domain of unknown function (DUF370) IRT44_RS18130 PF08340 Domain of unknown function (DUF1732) IRT44_RS18130 PF03755 YicC-like family, N-terminal region IRT44_RS18135 PF05670 NFACT protein RNA binding domain IRT44_RS18160 PF00378 Enoyl-CoA hydratase/isomerase IRT44_RS18165 PF02515 CoA-transferase family III IRT44_RS18185 PF07729 FCD domain IRT44_RS18185 PF00392 Bacterial regulatory proteins, gntR family IRT44_RS18200 PF03745 Domain of unknown function (DUF309) IRT44_RS18215 PF07301 Protein of unknown function (DUF1453) IRT44_RS18220 PF13520 Amino acid permease IRT44_RS18230 PF02423 Ornithine cyclodeaminase/mu-crystallin family IRT44_RS18235 PF07690 Major Facilitator Superfamily IRT44_RS18235 PF00083 Sugar (and other) transporter IRT44_RS18240 PF00857 Isochorismatase family IRT44_RS18245 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IRT44_RS18245 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain IRT44_RS18245 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IRT44_RS18250 PF01266 FAD dependent oxidoreductase IRT44_RS18250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IRT44_RS18255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IRT44_RS18255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IRT44_RS18260 PF00230 Major intrinsic protein IRT44_RS18265 PF04309 Glycerol-3-phosphate responsive antiterminator IRT44_RS18270 PF03447 Homoserine dehydrogenase, NAD binding domain IRT44_RS18270 PF00742 Homoserine dehydrogenase IRT44_RS18270 PF01842 ACT domain IRT44_RS18280 PF00156 Phosphoribosyl transferase domain IRT44_RS18285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IRT44_RS18290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_RS18290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IRT44_RS18290 PF02142 MGS-like domain IRT44_RS18295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IRT44_RS18295 PF00117 Glutamine amidotransferase class-I IRT44_RS18300 PF01979 Amidohydrolase family IRT44_RS18305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IRT44_RS18305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IRT44_RS18310 PF00860 Permease family IRT44_RS18315 PF00156 Phosphoribosyl transferase domain IRT44_RS18325 PF00849 RNA pseudouridylate synthase IRT44_RS18325 PF01479 S4 domain IRT44_RS18330 PF01252 Signal peptidase (SPase) II IRT44_RS18340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_RS18340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_RS18340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_RS18340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_RS18350 PF00483 Nucleotidyl transferase IRT44_RS18355 PF13439 Glycosyltransferase Family 4 IRT44_RS18355 PF00534 Glycosyl transferases group 1 IRT44_RS18370 PF05067 Manganese containing catalase IRT44_RS18375 PF12652 CotJB protein IRT44_RS18400 PF04012 PspA/IM30 family IRT44_RS18405 PF13342 C-terminal repeat of topoisomerase IRT44_RS18405 PF01751 Toprim domain IRT44_RS18405 PF01131 DNA topoisomerase IRT44_RS18405 PF01396 Topoisomerase DNA binding C4 zinc finger IRT44_RS18425 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_RS18430 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_RS18435 PF00293 NUDIX domain IRT44_RS18440 PF07690 Major Facilitator Superfamily IRT44_RS18445 PF13378 Enolase C-terminal domain-like IRT44_RS18445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IRT44_RS18450 PF01258 Prokaryotic dksA/traR C4-type zinc finger IRT44_RS18455 PF00133 tRNA synthetases class I (I, L, M and V) IRT44_RS18455 PF08264 Anticodon-binding domain of tRNA IRT44_RS18460 PF05103 DivIVA protein IRT44_RS18465 PF17774 Putative RNA-binding domain in YlmH IRT44_RS18465 PF01479 S4 domain IRT44_RS18470 PF02325 YGGT family IRT44_RS18475 PF04472 Cell division protein SepF IRT44_RS18480 PF01168 Alanine racemase, N-terminal domain IRT44_RS18485 PF02578 Multi-copper polyphenol oxidoreductase laccase IRT44_RS18490 PF05239 PRC-barrel domain IRT44_RS18495 PF04539 Sigma-70 region 3 IRT44_RS18495 PF04542 Sigma-70 region 2 IRT44_RS18495 PF04545 Sigma-70, region 4 IRT44_RS18500 PF04542 Sigma-70 region 2 IRT44_RS18500 PF04545 Sigma-70, region 4 IRT44_RS18505 PF03419 Sporulation factor SpoIIGA IRT44_RS18510 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IRT44_RS18515 PF00005 ABC transporter IRT44_RS18520 PF01032 FecCD transport family IRT44_RS18525 PF01497 Periplasmic binding protein IRT44_RS18540 PF13333 Integrase core domain IRT44_RS18540 PF00665 Integrase core domain IRT44_RS18540 PF13276 HTH-like domain IRT44_RS18545 PF00091 Tubulin/FtsZ family, GTPase domain IRT44_RS18545 PF12327 FtsZ family, C-terminal domain IRT44_RS18550 PF02491 SHS2 domain inserted in FTSA IRT44_RS18555 PF06947 Protein of unknown function (DUF1290) IRT44_RS18565 PF05949 Bacterial protein of unknown function (DUF881) IRT44_RS18570 PF03799 Cell division protein FtsQ IRT44_RS18570 PF08478 POTRA domain, FtsQ-type IRT44_RS18575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_RS18580 PF01565 FAD binding domain IRT44_RS18580 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IRT44_RS18590 PF01098 Cell cycle protein IRT44_RS18595 PF02875 Mur ligase family, glutamate ligase domain IRT44_RS18595 PF08245 Mur ligase middle domain IRT44_RS18600 PF00953 Glycosyl transferase family 4 IRT44_RS18605 PF08245 Mur ligase middle domain IRT44_RS18605 PF02875 Mur ligase family, glutamate ligase domain IRT44_RS18605 PF01225 Mur ligase family, catalytic domain IRT44_RS18610 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS18610 PF03717 Penicillin-binding Protein dimerisation domain IRT44_RS18610 PF03793 PASTA domain IRT44_RS18615 PF03793 PASTA domain IRT44_RS18615 PF00905 Penicillin binding protein transpeptidase domain IRT44_RS18615 PF03717 Penicillin-binding Protein dimerisation domain IRT44_RS18625 PF01795 MraW methylase family IRT44_RS18630 PF02381 MraZ protein, putative antitoxin-like IRT44_RS18635 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IRT44_RS18635 PF05221 S-adenosyl-L-homocysteine hydrolase IRT44_RS18640 PF10079 Bacillithiol biosynthesis BshC IRT44_RS18645 PF01381 Helix-turn-helix IRT44_RS18655 PF02558 Ketopantoate reductase PanE/ApbA IRT44_RS18655 PF08546 Ketopantoate reductase PanE/ApbA C terminal IRT44_RS18660 PF01039 Carboxyl transferase domain IRT44_RS18665 PF00378 Enoyl-CoA hydratase/isomerase IRT44_RS18670 PF00682 HMGL-like IRT44_RS18675 PF00364 Biotin-requiring enzyme IRT44_RS18680 PF02785 Biotin carboxylase C-terminal domain IRT44_RS18680 PF00289 Biotin carboxylase, N-terminal domain IRT44_RS18680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_RS18685 PF00583 Acetyltransferase (GNAT) family IRT44_RS18695 PF00378 Enoyl-CoA hydratase/isomerase IRT44_RS18700 PF03960 ArsC family IRT44_RS18710 PF11117 Protein of unknown function (DUF2626) IRT44_RS18725 PF00753 Metallo-beta-lactamase superfamily IRT44_RS18750 PF13276 HTH-like domain IRT44_RS18750 PF00665 Integrase core domain IRT44_RS18760 PF13638 PIN domain IRT44_RS18760 PF02562 PhoH-like protein IRT44_RS18765 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) IRT44_RS18770 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_RS18775 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_RS18805 PF01261 Xylose isomerase-like TIM barrel IRT44_RS18815 PF03144 Elongation factor Tu domain 2 IRT44_RS18815 PF00009 Elongation factor Tu GTP binding domain IRT44_RS18815 PF14492 Elongation Factor G, domain II IRT44_RS18815 PF00679 Elongation factor G C-terminus IRT44_RS18820 PF02675 S-adenosylmethionine decarboxylase IRT44_RS18845 PF06335 Protein of unknown function (DUF1054) IRT44_RS18850 PF03060 Nitronate monooxygenase IRT44_RS18855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IRT44_RS18855 PF01276 Orn/Lys/Arg decarboxylase, major domain IRT44_RS18870 PF12146 Serine aminopeptidase, S33 IRT44_RS18900 PF01546 Peptidase family M20/M25/M40 IRT44_RS18900 PF07687 Peptidase dimerisation domain IRT44_RS18905 PF00202 Aminotransferase class-III IRT44_RS18910 PF14602 Hexapeptide repeat of succinyl-transferase IRT44_RS18910 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_RS18910 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal IRT44_RS18915 PF00258 Flavodoxin IRT44_RS18925 PF12787 EcsC protein family IRT44_RS18945 PF01209 ubiE/COQ5 methyltransferase family IRT44_RS18950 PF13533 Biotin-lipoyl like IRT44_RS18955 PF12704 MacB-like periplasmic core domain IRT44_RS18955 PF02687 FtsX-like permease family IRT44_RS18955 PF00005 ABC transporter IRT44_RS18960 PF12704 MacB-like periplasmic core domain IRT44_RS18960 PF02687 FtsX-like permease family IRT44_RS18960 PF00005 ABC transporter IRT44_RS18970 PF08543 Phosphomethylpyrimidine kinase IRT44_RS18975 PF00892 EamA-like transporter family IRT44_RS19040 PF02110 Hydroxyethylthiazole kinase family IRT44_RS19045 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_RS19045 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_RS19050 PF00294 pfkB family carbohydrate kinase IRT44_RS19055 PF04962 KduI/IolB family IRT44_RS19060 PF01261 Xylose isomerase-like TIM barrel IRT44_RS19065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_RS19065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IRT44_RS19065 PF00205 Thiamine pyrophosphate enzyme, central domain IRT44_RS19070 PF02653 Branched-chain amino acid transport system / permease component IRT44_RS19075 PF00005 ABC transporter IRT44_RS19080 PF13407 Periplasmic binding protein domain IRT44_RS19085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_RS19085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IRT44_RS19090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IRT44_RS19090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_RS19095 PF00356 Bacterial regulatory proteins, lacI family IRT44_RS19100 PF04892 VanZ like family IRT44_RS19105 PF03551 Transcriptional regulator PadR-like family IRT44_RS19110 PF02796 Helix-turn-helix domain of resolvase IRT44_RS19110 PF00665 Integrase core domain IRT44_RS19115 PF01695 IstB-like ATP binding protein IRT44_RS19130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_RS19135 PF00271 Helicase conserved C-terminal domain IRT44_RS19135 PF04851 Type III restriction enzyme, res subunit IRT44_RS19145 PF01230 HIT domain IRT44_RS19150 PF00535 Glycosyl transferase family 2 IRT44_RS19160 PF16363 GDP-mannose 4,6 dehydratase IRT44_RS19185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_RS19185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_RS19185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_RS19195 PF08000 Bacterial PH domain IRT44_RS19205 PF02463 RecF/RecN/SMC N terminal domain IRT44_RS19225 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_RS19240 PF04608 Phosphatidylglycerophosphatase A IRT44_RS19260 PF13673 Acetyltransferase (GNAT) domain IRT44_RS19265 PF02811 PHP domain IRT44_RS19275 PF16123 Hydroxyacylglutathione hydrolase C-terminus IRT44_RS19275 PF00753 Metallo-beta-lactamase superfamily IRT44_RS19280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_RS19280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_RS19285 PF01595 Cyclin M transmembrane N-terminal domain IRT44_RS19285 PF03471 Transporter associated domain IRT44_RS19285 PF00571 CBS domain IRT44_RS19335 PF06144 DNA polymerase III, delta subunit IRT44_RS19340 PF06144 DNA polymerase III, delta subunit