IRT44_RS00020    2069 ..    2091 +  -5.4  -3.51934   CAAGCAGATGAACGA           TGCCCTGTCG GTG CGGCGGGCCG           TGTTTGTCGAGGAGC  56 245
IRT44_RS00055    7245 ..    7274 + -18.7  -3.92542   CTTTGTCTACACGCT       GAAGTGTCCCCTG CCCG CAGGGGGCACTTC        TTCTTTCCGGCTGCC 100 353
IRT44_RS00060   10081 ..   10129 + -11.6  -4.78764   GGCTGAACAGGAAGA GCGCCGTGTCGCC-CACCTCGGA TTGG TCCACGGTGCGGCGGAGCGGTGC TTTTTCCTCGATTTC  95 338
IRT44_RS00080   13239 ..   13258 + -12.2   -5.5074   TGTTTTCAGTCAGAT            GCTGAGAC CCTT GTCTCAGC             TTTTTTGTTGCCTTG 100 501
IRT44_RS00085   13979 ..   14004 + -10.3  -5.00616   TCTCGTTGGACGAGC         TGCGGGAGCCG TAAC CGGCTCCCCCC          TTTTTTACGGACGGA 100 12
IRT44_RS00090 NONE
IRT44_RS00095 NONE
IRT44_RS00100 NONE
IRT44_RS00105   17201 ..   17238 + -16.5  -3.76952   AGGCTTGAAACCAAA   CAACGCCCCTGGTACG AAAAAAG CGTAC-AGGGGCGTTG   TTTAGCTTGCATGCA 100 33
IRT44_RS00145   25111 ..   25138 +  -5.4  -4.28994   CGACAGTGTACGCCG        CC-GGCCGCGGCC GTA GGCGATGGCCAGG        TTTTCCTCGATGGTC  69 498
IRT44_RS00175   31773 ..   31805 +  -3.4  -2.78384   TGATAGAAATGGATG     CGCTGG-ATTGAAAC ATTC GGATCGATACCAGCG      TCTCATAGAGGAAGG  41 15
IRT44_RS00180 NONE
IRT44_RS00185   33859 ..   33890 + -14.6  -4.56914   CCCAGCACCAAAAAA      GGGACACTGCTT CCTCGAAA AAGCAGTGTCCC       TTTTGGTTTCCGTCC 100 62
IRT44_RS00200   37106 ..   37139 +  -5.2  -4.17048   CCCGAGTGCGTACAT     GACGTTCCCCACCA CGATGC TGGTCAGGGGCGTC      TTGTTTTCCGCCCAG  66 380
IRT44_RS00245   47061 ..   47091 + -16.3  -4.82667   CGCACCAAAGCAAAA      TCCCCCATGGG-TG ATTT CAGCCCATGGGGGA       TTTTTCATGTGATGA 100 76
IRT44_RS00280   53738 ..   53772 +  -3.5  -5.47399   GCAAAATAAAAAAAC    AAGACCGGTACCGACA GTTT TGTCGAC-CCGGTCTC     TTTTTTTGACGTTCA  85 67
         map   55866 ..   55896 + -17.6  -4.20516   GGTCTGCAAAGAAAA       GCGGCAGCTCCC CAAGCAA GGGGGCTGCCGC       TTTATTGACTCACGG 100 68
IRT44_RS00335   62552 ..   62572 + -11.1  -3.67597   GTCTACATGCTGAAA            CCCCCTCGT TTG ACGAAGGGG            TTATTGCATAGAACA  82 400
IRT44_RS00355 NONE
IRT44_RS00360   68664 ..   68697 + -15.5    -4.371   TACGCCTGCAATGCA     CAACAGGTATGCC TTTCATGC GGCATACCTGTTG      TTTTCATATGGTCGG 100 81
IRT44_RS00435   80111 ..   80135 + -11.5  -4.29176   ACCACATACAAAAAA          CAGACGGAC ATGTATC GTCCGTCTG          TTTTGCATTGCGTAT  91 221
IRT44_RS00530   87393 ..   87449 + -10.4  -2.96157   CACTCTTAGAGTGCA CCCCTTAAAGTAGACATTGGAAAAACCC CTT GGGATAA-CCGATGT-TACTTTAAGGGG TGAATTTTTTATGGC  70 81
IRT44_RS00535 NONE
IRT44_RS00540   88608 ..   88629 +  -3.5  -5.14477   GAGTACAGGCGTCAG           CATGCGGCC TAAC GGCCGGGGG            TTTTTTAAGTGTCTA  78 14
IRT44_RS00560   92356 ..   92394 +  -8.9    -5.055   TAGCCTTACCTGCCA  GCGTGGAAG-AAGCACGA CTGT TTGTGCCGACTTCCACGC   TTTTTTACGCCTTCG  93 57
IRT44_RS00580   95604 ..   95629 +    -9  -5.33921   AGCACATGGAAAAAA         GACGCATCCC CGGCAC GGGATACGTC          TTTTTTCCTTACTTT 100 113
IRT44_RS00590 NONE
IRT44_RS00600 NONE
IRT44_RS00605  100309 ..  100341 +  -9.9  -4.77757   CAGCCGCAACGAACA     AACACCCGCA-GCG CTGTAA CGCCTGCGGGTGTG      TTTTCCTTTTTGAAG 100 7
IRT44_RS00635 NONE
IRT44_RS00640  105180 ..  105213 + -11.9  -4.57341   AATCGCCCCTCGACA     TAGCGGAAGGAGTGGT TCG ACCACTCCTT-CACTA     TTTTTCGACAACATT 100 23
IRT44_RS00645  106718 ..  106754 +  -9.5  -4.89966   CATTCCGCTATAAAA    CAGCCATGCTGCTTT TCCACTT GGAGCAACATGGCTG    TTTGTTTTTCACTCT 100 28
IRT44_RS00660  109344 ..  109361 +    -7    -3.214   TCTGCGGAGCTGAAC             GGACGA AAGCGC TCGTCC              TCTTGCTGTGGTACA  58 28
IRT44_RS00665  110816 ..  110849 + -16.1  -3.95073   GTATCAAACTCATCA     GCCCTTGTTGTTGCC AGTA GGCAATACCAAGGGC      TTTGTGCATGTGCGG 100 143
IRT44_RS00710 NONE
IRT44_RS00715  123972 ..  123998 +   -15  -3.41708   AGCCAAAAACGCAGC         CGGGGCGGACCC CAT GAGGCCGCCCCG         TTACATTTTCCTTGA  91 67
        rpsD  124862 ..  124883 + -14.5  -5.75342   TTTGATAGAGAAAAA           GAAGTCGGG TTAT CCCGACTTC            TTTTTTTTGCCAAAA 100 43
IRT44_RS00735  130367 ..  130394 + -10.7  -4.36914   GGATAGAGAGGTGAA        CAAGAGATGGT TTTGCT GCCATCTCTTG         TTTTCTAAACCAGGA  89 55
IRT44_RS00740  131040 ..  131056 +  -2.3  -3.53012   CGCTTTCAACACCGC              TATTTCT ATT AGGAGTA              TTTGGAGCGCCAGGA  47 14
IRT44_RS00745  131724 ..  131750 +  -4.4  -2.68434   CCCGGGGAAGGGGGG         GAGGGGCGTT GAGCCGG AACGCTCGTC         TGATCTACTCTGCCG  44 14
IRT44_RS00750  132944 ..  132967 +   -11  -5.17353   GCACCATATGAAAAA          CCGGTCTCTC CCGC GAGAAACCGG           TTTTTTCATGCGTGT 100 80
IRT44_RS00775  139071 ..  139122 + -16.3  -3.66178   GAGTAACCGTCTGCT CT-CACAAAAAAACGGGTGCGGC CCTTACAA GCC-CACCCGTTTTTTTGTGCAG TTTCACATTCGCGGC 100 35
IRT44_RS00795  140919 ..  140939 +  -8.3  -5.31877   GCGTTTCATACGCAC            GCTACCC TGACCAC GGGTAGC            TTTTTTCTCGTCGAT 100 101
IRT44_RS00800  142149 ..  142173 + -11.5  -5.40625   TCGCCGCACAAAAAA          GCGAAGGGA CGCAAAA TCCCTTCGC          TTTTTTATCTGCTCT 100 49
IRT44_RS00810 NONE
IRT44_RS00815  143921 ..  143956 +   -11   -5.1287   GCACCGGCTGTCCGC    GCCCCGCTAAAGTCCC GCCA GGAACGTCGGCGGGGC     TTTTTTGGCTGTCCA 100 47
IRT44_RS00820  145845 ..  145866 +  -7.2  -4.40561   CGCCCCCAACAAAAA           ACCCCGTC TACCGT GACGGGGC            TTGTTTTTCAAAGGC  76 384
IRT44_RS00840 NONE
IRT44_RS00845  148245 ..  148278 + -16.1  -3.95073   GTATCAAACTCATCA     GCCCTTGTTGTTGCC AGTA GGCAATACCAAGGGC      TTTGTGCATGTGCGG 100 163
IRT44_RS00895 NONE
IRT44_RS00900  162851 ..  162884 +  -8.1  -3.78775   CTGCCACCTGCCACC     GCTGGCTTATGCCTGC GCG GCAGGGATC-GCCGGC     TTTCGTGGTCGGCAG  70 69
        acnA  166009 ..  166030 + -14.5  -4.67038   AGCACCCGCATGAAA           CAGGCAAGC GAAT GCTTGCCTG            TTTTCATTTTCAGCG 100 58
IRT44_RS00910 NONE
IRT44_RS00925 NONE
IRT44_RS00930  170261 ..  170282 + -10.2  -5.40072   AAAAGTACAGTTTGA           CAGGCAAG CGAATA CTTGCCTG            TTTTTTTAGAAAAAA 100 371
IRT44_RS00960  176668 ..  176690 +  -9.2  -4.20932   CCGTGCAGCAAAAAA           GACCACCT GACGTCA AGGTGGTC           TTTTCAATACCTATT  79 77
IRT44_RS00985  183633 ..  183661 + -16.1   -5.3671   GCGGATAACGTATGA        CAGGCATGGCG CCGAAAA CGCCATGCCTG        TTTTTTCATTATATT 100 41
IRT44_RS01030  192100 ..  192124 +  -2.6  -3.80855   GTAAAACACCTCTAT          GCCGCCCCGG CGTGC CCAGGGATGC          TTCGTTTTTCGCGGC  50 42
        ilvD  194530 ..  194554 + -17.2  -2.67803   CGGTCCAAAACAACA          CGGGCACCTC ACAAA GAGGTGCCCG          TACGTTTGATCAAGA  95 44
        trmB  197600 ..  197633 + -16.1  -3.95073   GTATCAAACTCATCA     GCCCTTGTTGTTGCC AGTA GGCAATACCAAGGGC      TTTGTGCATGTGCGG 100 174
IRT44_RS01070 NONE
IRT44_RS01075  202537 ..  202562 +  -3.9  -2.87931   TAGTGCTCCGTCTCT         TCATAGCGGAC CTCT GTCAGCGGTGA          TGTGTCGAAGCTGAG  44 180
IRT44_RS01085  204774 ..  204798 + -17.1  -4.14945   ACCGTCGGCAAAAAA          GCGCGCTCCCG CTG CGGGAACGCGC          TTTGCTTATTCTTCC 100 122
IRT44_RS01105  210268 ..  210284 +  -9.4  -3.34344   TCAAAATAAATGAAA              GCGGCT TCTTC AGCCGC              TTCGTTGACAGATGG  69 77
IRT44_RS01110  211077 ..  211106 +    -5  -5.07053   GATGCCGTCTGCCTC       TCGGGCGAGCGTT ACGCC GATGCT-GCCCGG       TTTTTTGCCGTACTT  83 296
IRT44_RS01145  216738 ..  216750 +  -6.2  -3.73122   TCTGTTCACGCTGCA                GCGG CTCCA CCGC                TTTCCGCTTGTTCTC  61 418
IRT44_RS01170  222313 ..  222354 +   -11  -4.89477   AGGTTGGCTTGCCAG GTGGCACGGCCTCTGATTCC GGTC GGAGT-GGAGGTCG-GCCAC TTTTCTTCTTACAGC 100 44
IRT44_RS01175 NONE
IRT44_RS01180 NONE
IRT44_RS01185  224824 ..  224853 + -18.1  -5.26875   TTCAGCAATCAAAAA       GGCTCTGTGTTTT ATGC AAAACACAGAGCC        TTTTTTGGTTGCAGG 100 62
IRT44_RS01215 NONE
IRT44_RS01220  234524 ..  234541 + -11.3  -4.95155   CACCATACAAAAAAA             CCACTGG GGTT CCAGTGG              TTTTTGTCATGTCGC 100 48
IRT44_RS01255  242991 ..  243015 + -15.8   -3.1478   CTGGCTAAGAAAAAA          CAGAGGTGCC CTCGT GGCACCTCTG          TGTTGCTCACCTACT  93 33
IRT44_RS01270  247298 ..  247323 + -12.5  -4.91109   TTGCCGCTTTGCGGG         CCGCCATTGCC TCTT GGCGACGGCGG          TTTTTCTCGTACAAG 100 275
IRT44_RS01300  254629 ..  254683 + -16.5  -3.06796   AGAGAAGGTCTCCAT CGTGTTTGAAGGGCTGGACGCATGA GCTCA TCATGTGCCCGGCCCTTCTGGCATG TTGGATGCGCTGACC 100 1
IRT44_RS01305 NONE
IRT44_RS01310  257703 ..  257743 + -12.8  -4.50627   GCCCTGCTTCCTGAT TGACGACACGCCGTATCCGC AGA GTGG-TACGGCGTGTT-TCA TTTGTTTCCTCGATG 100 139
IRT44_RS01320  260149 ..  260185 +  -4.1  -6.23317   ACTGCACGAAAAAAA    CGAGCCCTCCCGTCGGC ACT GCCTGAGGGAAGACCCG    TTTTTTTGTTTTTAT 100 107
IRT44_RS01365  270974 ..  271006 + -14.2  -3.40299   AGACATGCGCAAAAA     GACGCCAGCTGCTCC CGCG GGAGCAAC-GGCGTC      TTGTACGTCTGCTGG  88 432
        putP  273050 ..  273089 + -13.8  -4.56775   TCCCACTCTATTCAC  T-GGCAGACCGTCAATGCA ACC TGTATTGGCGGTCTGCTTA  TTTTTGCACACGAAT 100 61
IRT44_RS01395 NONE
IRT44_RS01400 NONE
IRT44_RS01405 NONE
IRT44_RS01410 NONE
IRT44_RS01415  282978 ..  283004 +    -5  -3.53563   GAAGTTTGGACAGAT         CGTCGGCCATCA GGG TGATGTCGGCCG         TTTCCAGCGCCGTAT  53 358
IRT44_RS01430 NONE
IRT44_RS01435 NONE
IRT44_RS01440  288371 ..  288398 + -13.5  -3.71913   GCGTAATAACAGCAA        GACCGCC-GGAG ATCTC CTCCTGGCGGTC        TGTTTTGCATCTGAA  90 35
IRT44_RS01510  303306 ..  303320 +  -8.6   -3.1552   GCAGTCTGCTTGTAA               TACAGG GTG CCTGTA               TGTTCATCGATAAAA  60 247
IRT44_RS01545  309890 ..  309904 +  -4.2  -3.54424   GTCCTTGTTGTCAAC               GGCTTC GTG GAACCC               TTTGCCGCGGTCGCG  51 457
IRT44_RS01595  319371 ..  319423 +  -7.2  -5.40072   ACCAAGGAAAACAAA TGAGCAGCGAGCCCTCGGCTCCG-CCT TTTT AGGACGG-G-CGGGGGCTCG-TGC-CG TTTTTTTGCAGCGCC 100 23
IRT44_RS01600  321485 ..  321499 +  -2.8  -3.06501   TGAAAAAAGAGCGAA               GCAG ACTCGTG CTGC               TTCGCTCAGCGTGTA  44 77
IRT44_RS01680  339400 ..  339419 +  -4.2  -4.47551   ACTTCCCGGATCGTA            TGCGTCGT CTCC ACCACGCG             TTTTGTGCCTTCGGT  68 291
IRT44_RS01715 NONE
IRT44_RS01720  350863 ..  350888 +    -9  -4.77896   GTGTCAACCAAAAAA         CCAGCGGG CAGCCAATAT CCCGCTGG          TTTTTCCGTTGCTTA  91 59
        queC NONE
        queD NONE
        queE NONE
        queF  364253 ..  364277 + -14.4   -4.2349   CCCACCTCAAAAAAA          TGCCAGACGA GCCGA TCGTCTGGCA          TTTTGCCTGTAAAAA 100 83
IRT44_RS01805 NONE
IRT44_RS01810  372583 ..  372605 + -15.6  -3.04792   ACCGCTGAATACGCA           GCCCGGATCG CCG TGATCCGGGC           TGTTCGCCATCCTCC  93 33
IRT44_RS01820  374673 ..  374687 +  -5.6   -4.1552   GGCATTTGGCAGTAC               CCCGTC TTG GACGAG               TTTATTCAGCAAATG  66 315
IRT44_RS01935  396765 ..  396804 +    -4  -3.53012   ACGAAAAGAGACGGA  CAGAGTTGTCCCGCACCG GAAA CGGAGCCGGACAGCGACG   TTTCGGGGAGGGAGA  52 41
IRT44_RS01940  397631 ..  397663 + -14.3  -5.19879   CTGTACACAAGCAAA     GGATTTGCCGCCGG CTCACT CCGG-GGCAAATCC      TTTTTGTGTTTCCAA 100 55
IRT44_RS01970  402307 ..  402340 + -11.1  -5.31877   TCCATGGCCAAAAGC     GCCCTGT-CAGCTG TCATCTT CGGCTGGACAGGGC     TTTTTTGTCATCCAT 100 41
IRT44_RS01975  403167 ..  403178 +  -5.8  -5.27335   TTGGCCATTTTTCAC                CTGC TCGT GCAG                 TTTTTCTTTCAGCGC  88 446
IRT44_RS01990  405362 ..  405404 + -14.9  -4.78107   TTAAGTCAAACAAAA GCGTGGCGGTCAAGAACGTG TACA CACGTTCC-GTTCGCCACGC TTTTTCGTGCTGCTG 100 37
        mqnE  408270 ..  408302 + -17.1  -4.66537   CCGTCACCCTCACTG      CAAGCTGACGCCTCT CTT ACGGGCGTCAGCTTG      TTTTGTATTGCCCCG 100 65
IRT44_RS02020  410076 ..  410104 + -14.6  -4.17906   GCCGTTAGGCCGCAT        GCTGACGCCTGT ACTCG ACTGGCGTCAGC        TTATTTAATTTGATT 100 117
IRT44_RS02055  414760 ..  414789 + -12.1  -5.18355   TCTAATCGAGCAAAA       GCCCTTACCGGTT TTAC GGCCGGCAAGGGC        TTTTTACTTTTTCAG 100 36
IRT44_RS02080  418623 ..  418638 +  -3.2  -3.05384   GATGCGCTCCGGTTT              GCCG ACGACTAC CGGC               TTGACTCCGGACGCC  43 230
        glpX NONE
IRT44_RS02110  421927 ..  421954 + -13.5  -4.67353   GGACATGACAGACAA        GGGACG-GCCTG ACCAA CAGGCGCGTCCC        TTTTTCACTGCGTGC 100 45
IRT44_RS02120  424145 ..  424175 + -12.7  -5.43487   CACCCGCTAACGGCA       ACAAACCCCTATG ACTGC CATAGGGGTTTGC       TTTTTTGTCTACTTT 100 31
IRT44_RS02140  429953 ..  429990 + -12.7  -5.08824   TTTGTCTACACGCTG   AAACAGCCTTGCCCGCT TGTC AGCGGACAAGGCTGTCG    TTTTTTCACTAGCGG 100 408
IRT44_RS02155  433148 ..  433168 +    -9  -5.40072   TCTACACGCTGAGAA            GAAGCGGT GAGCG GCCGCTTC            TTTTTTTGACAGCCC 100 372
IRT44_RS02160  434885 ..  434906 + -10.2  -2.94099   TTTGGTGCCGGCCCG           CTCGATCG CCTGCT CGATCGAG            TCTGTCGTCAGCACG  64 134
IRT44_RS02220 NONE
IRT44_RS02225  446372 ..  446406 + -10.8  -4.05446   CTGCGTAAAAACACG     TAGGCACACCATGG AACAGCA CCATAGTGTGCCTG     TTTGTCGTTACAGGC  84 23
IRT44_RS02235 NONE
        corA  449313 ..  449332 +   -10  -4.77036   AGGTCGTATTCGTAC            GGCGACGCC ACC GGC-TCGCC            TTTTTCGTCGTAGAG  95 109
IRT44_RS02275  455432 ..  455442 +  -3.2  -3.11768   TGTCAAAGGAAGCGC                 CCAG ACA TTGG                 TATTCGATCATCTCC  43 341
IRT44_RS02310  464632 ..  464643 +  -5.8  -3.61398   ATCGACTGGACCGCC                GCTG CATC CAGC                 TTCTTCAGAAGGGCG  55 119
IRT44_RS02450  492464 ..  492508 + -16.1  -4.36596   TGTCCCGATAAAAAT GA-AAAACCCAGGAATGTTG ATTTTC CAGCATTCCTGGGTTTTGTC TTTGTTAGTTATCGG 100 186
IRT44_RS02500  502286 ..  502302 + -10.1   -5.4505   ACGACAACCGCCTCC              CCTCCTC CAT GGGGAGG              TTTTTTGTTGGAACA 100 336
IRT44_RS02505 NONE
IRT44_RS02510 NONE
IRT44_RS02515 NONE
IRT44_RS02520  505509 ..  505535 + -18.1  -3.33151   AAAACGAAAAACAAC         GAAGCCGAGGG ACATC CCCTCGGCTTC         TGTTCATTTCACCCG 100 45
        proB NONE
IRT44_RS02565 NONE
        proC NONE
IRT44_RS02575  520660 ..  520699 + -11.4  -4.21922   ATACGCAACGGCTTC  GCCGGTTTGCTGACTGTC ATTT GACACGAGGCAAACCGGC   TTTCATTTTGCCTGC  91 66
IRT44_RS02580 NONE
IRT44_RS02585  521494 ..  521523 + -16.6  -3.34517   ATTTGTCTTCAGTCT       GAAGGGACATCC GACAAG GGATGTCCCTTC        TGTTTGCAGACAAGT 100 65
IRT44_RS02595  523825 ..  523843 +  -8.1  -3.78018   CCAGGAAGCAAGAAA             GGGGAGC ACGTG GCTTCCC             TTTCAATCGTTTTTG  70 47
IRT44_RS02605 NONE
IRT44_RS02610  526271 ..  526303 + -18.5  -5.03314   TCAATGACAGCAAAA      GCCCTGATCCCGACA TCA TGTTGGGAGCAGGGC      TTTTTTCGCGCTCGG 100 34
IRT44_RS02615  527030 ..  527049 +  -2.7  -3.63744   GATGGCAAGCGCGGT            CACCTGC AAGGAA GCGGGCG             TGTTTTCCCGCACGA  51 243
        glnA  531799 ..  531821 + -17.8  -2.80589   CAGAAGCAACAAAAA           GACCGAGGCA TTG TGCCTCGGTC           TCAGTTTGTTTGCAG 100 101
IRT44_RS02735 NONE
IRT44_RS02740  554905 ..  554925 + -10.4  -3.14132   CCTCCCGATCCAGCC           GCGC-GCCC TCGA GGGCAGCGC            TTAATCCCGGGCAAC  71 1
IRT44_RS02770 NONE
IRT44_RS02775  563271 ..  563303 + -14.1  -5.68438   CCGTGTGAAAACAAA      CCGGCCTCGTCCCTT CTC AAAGGACGGAGCCGG      TTTTTTGTTTGGTGC 100 50
IRT44_RS02780  564243 ..  564272 +  -6.3  -3.18582   CCCGCCCGGACCAGG       CGGCCGCCATC GCCAGCAG GAAGGCGGCAG        TTCCTGCGTACAGTC  55 194
IRT44_RS02795  566449 ..  566470 +  -3.1  -2.76815   GAGTCGCCGTCGTCC           CAATCAA AAAAAGAA TTGATTG            ATTATTAAAAAGAGT  41 52
IRT44_RS02800  567578 ..  567609 +  -9.5  -4.07568   CAGTTTGTCTTCAGT      CTGAGAGCCCTTCC ATTTA GGAAGGGCTC-CAC      TTTTACGGAAACACG  80 408
IRT44_RS02815 NONE
IRT44_RS02820  572819 ..  572831 +  -3.3  -5.25799   CGTTGACGACGAAGT                GGAGG TTA CGTCC                TTTTTCTCTTATTTT  80 35
IRT44_RS03010  623202 ..  623219 +  -6.9  -2.60032   AATCTACCATCGTTC             CCAGGCC GGAA GGCCTGC              ACTTTTTACAACCAA  52 100
IRT44_RS03015 NONE
IRT44_RS03020  624293 ..  624322 +  -9.4  -5.12617   CCCCAAAATAAAAAA       TGGGCGGAAAACC GATAA GGTTT-CCGTCCA       TTTTTTGGCTACTTG 100 63
IRT44_RS03060  633881 ..  633918 + -13.4  -4.00526   GCTTATCGCACAAAA   GCACCCGCGCTGCTGC GATCTG GCAGCAATACGGGTGC    TTTCATTGTGCCCTT  93 55
IRT44_RS03130 NONE
IRT44_RS03135  652146 ..  652198 + -10.8  -4.56597   ATACACAAACAACAA ACAAGGGTCCATCA-CCT-TGCTG ACACACG CAGCACAGGCTGATGGACCCTCGC TTTTTCCAGCACGAC  91 52
IRT44_RS03165  662560 ..  662576 +    -5  -4.02022   AAAGAGAAAAAATGA              GACCGG ATGAG CCGGAC              TTTGTCCTCCTTGGA  62 429
IRT44_RS03175  663616 ..  663635 +  -6.4  -3.22886   TAATTATAAGAAGGA            GGGG-CTCG AAG TGAGGCCCC            TATCTTCTATGCCCT  55 38
IRT44_RS03180  664953 ..  664964 +  -5.8  -3.01712   TCTCTTTCAGATTGT                CGCA ATGC TGCG                 TATTAAAAGAAAAAG  52 436
IRT44_RS03190  667080 ..  667109 + -10.7  -4.91109   GAACGTCTATTGTAC       AGACCGTAGGTGT AGCA GCACCTGCGGTCC        TTTTTATGATGCACA 100 107
IRT44_RS03215  672385 ..  672404 + -13.6  -4.64846   AGCCGCGGCGTTACA            CACCGGAG ACAT CTCCGGTG             TTTTCTCATTTCTCG 100 51
IRT44_RS03220  673551 ..  673565 +  -3.4  -3.92373   ATCGGCAATGCGATG               CTGGTC AGC GGCCTG               TTTCTCAGTCACATG  54 403
IRT44_RS03235 NONE
IRT44_RS03240 NONE
IRT44_RS03245  678105 ..  678131 + -19.6  -5.15969   AAACGAACAAAAAAA         GGTGCTTTCCCT CAG AGGGAAAGCACC         TTTTTTGCGTTGCCG 100 68
IRT44_RS03300  688789 ..  688817 + -17.5   -5.1287   GCAATCAGCTATAAA        CGCGATTCTCTGC CAG GCAGAGGGTCGCG        TTTTTTACGTGTACA 100 47
IRT44_RS03310 NONE
IRT44_RS03315 NONE
IRT44_RS03320 NONE
IRT44_RS03325 NONE
        clpP  694220 ..  694242 + -16.3  -4.94972   CCCCTCGAAGCACGA           CACCCGGCC AGCAA GGCCGGGTG           TTTTTACTTCTCCTC 100 64
IRT44_RS03495 NONE
IRT44_RS03500  726049 ..  726077 +   -19  -5.27477   GTTCATATACAGAAG        CAGGTCCACTCG CTGCA CGAGTGGACCTG        TTTTTTCATTCGCGT 100 172
IRT44_RS03520  732829 ..  732861 + -19.2  -3.85909   ACAAGACAAAAAAAA      CAGCCGTACCGGCC GAACA GGCTGGTGCGGCTG      TTTGACTTTCGCTGG 100 60
IRT44_RS03555  742623 ..  742656 + -16.1  -3.95073   GTATCAAACTCATCA     GCCCTTGTTGTTGCC AGTA GGCAATACCAAGGGC      TTTGTGCATGTGCGG 100 155
IRT44_RS03675  769860 ..  769887 + -11.4  -5.36441   GGGTTTAACCCGGGA        CATGGCAGGCTGT CGG ACAGCCTGCT-TG        TTTTTTGTATACACG 100 33
IRT44_RS03930  827765 ..  827794 +  -3.4   -5.5604   TATTTTGACCCACCA       TCGCCGGTTTAG AATTGA CCCACCCGGCGA        TTTTTTGTTGGTTAG  86 33
IRT44_RS03945  830127 ..  830137 +  -3.2  -3.21276   CGGTAACAATAACAG                 TGGG TTA CCTA                 TGTTGTCAGGAGAAC  46 96
IRT44_RS03950  831021 ..  831067 + -11.8  -4.25658   TAGCAATAAGGATAA GAGA-AAAGCCCCG-GTGGACTC TACT GAG-CCACACGGGGCTTTCTCGC TTCTTTTACTCGGAT  95 332
IRT44_RS03970 NONE
IRT44_RS03975  841149 ..  841179 + -21.4  -4.09805   TGGACGACAAAAACA       GAAGCTGAAGAGGA AAT TCCTCTTCAGCTTC       TTTCATTGTTACTGC 100 18
IRT44_RS04220 NONE
IRT44_RS04225  891452 ..  891507 + -17.8  -2.90639   CCATGCGCCACGGAC TTTGTCTACATGCTGAGACCCCG-GAG TTA TTCACGGGGTCTCAGATTGAAGACAAA CTGTTTATTTAGTAA 100 407
IRT44_RS04330  910987 ..  911016 + -13.5  -5.65927   AATCCTGGACAAAAA       GACGCACCACCGG AGAT CCGAAGGTGCGTC        TTTTTTGTTTGGGTA 100 145
IRT44_RS04345 NONE
IRT44_RS04350  916066 ..  916114 + -10.9  -4.74706   TGACAGCGGAACGAA AAAAGGCCCGCCTTGCGGAAGCA GCC TGCTTTCGCACAGCGGGCATTCG TTTTTACATATTGCG 100 94
IRT44_RS04395  926932 ..  926955 +   -14  -3.55444   CGGGACTATAACAAA          GAAGCACCAT ATAC ATGGTGCTTC           TTTCCAAACTACAGA  89 30
IRT44_RS04425  933884 ..  933911 + -12.8  -5.07567   GCAGCTATTGTACAA        GGCTGCAGATGT TCCC GCATCTGTAGCC         TTTTTTACCATATGC 100 105
IRT44_RS04450  940167 ..  940194 +  -4.8  -4.17309   ACGAAACTGCCGGGG        ACAGCCCTCT TTTCCGTC AGGGGGCTGA         TTCTTCTTTGTCGTC  63 71
IRT44_RS04520 NONE
IRT44_RS04525  959100 ..  959129 +  -3.4   -5.5604   TATTTTGACCCACCA       TCGCCGGTTTAG AATTGA CCCACCCGGCGA        TTTTTTGTTGGTTAG  86 366
IRT44_RS04540  962554 ..  962589 +  -6.1  -4.07568   TGATGCTCCCTTCCC    GCAGCAGCCGGTCAGC CAGTA GATGACCG-TAGCTGC    TTTTGGCGAGCAAAA  66 518
IRT44_RS04565  968334 ..  968356 +  -6.3  -3.47617   TGTCAACAAAGAAGA           GTCTCCC GTCTTATTA GGGAGAC           TTATACATTTAGACT  57 243
IRT44_RS04595  976662 ..  976673 +  -5.8  -4.08767   CACTGAGTTGAGCAG                CAGG ACCC CCTG                 TTTTGCCCAGCTAAC  64 387
         ggt  984854 ..  984887 + -19.7  -2.76046   GGGATATTGATTCAC     TCCAGACTGCCGGGA GCAT TCCCGGCAGTCTGAA      TGCTGTTACGCTTCA 100 31
IRT44_RS04635  986945 ..  986964 +  -6.4  -5.14563   TAAGCACAACAAAAA            GGCACCCGT TTT GCGG-TGCC            TTTTTTGCTGCCGGC  86 38
IRT44_RS04710 1002688 .. 1002724 +  -9.3  -3.05384   TTTTTCTCCGGGAAA    ACAACCAGGCTGCCGAC GAT GTCGACAGCCTGAATGA    TTGCCTGGCACCCGG  65 51
IRT44_RS04750 1010565 .. 1010601 +  -3.8  -5.01042   AGAAATAAGAAAAAA   GCAGAGGTGTCGGAA AACAGGCG TTCCCG-ACCTCTGC    TTTTTAATTTGCCTT  74 33
        glpQ 1028690 .. 1028728 +  -4.1  -5.36441   GGGTTTATTTGTGCT  GTACCTTTATTCATTC CCGATTAC GAATGAATGA-GGTGC   TTTTTTGTGTCCAAA  82 291
IRT44_RS04825 NONE
IRT44_RS04830 1030509 .. 1030537 + -18.2  -5.14563   CATGTGATAAAGAAA        CGGCCCGGATGG CACGA TCATCCGGGCCG        TTTTTTCATACAAAA 100 48
IRT44_RS04845 NONE
IRT44_RS04850 1034637 .. 1034663 +  -9.4  -3.50555   TTCAAAAGGCGTAAC         GAAGGGGGCA CCTGGAA TGCCCCCTGC         TTGCTATTCTTTCGG  70 27
IRT44_RS04860 NONE
IRT44_RS04865 1038290 .. 1038309 +  -7.2  -5.40072   AGGTGTTATGACCAG            GTACCAAT GAAA GTTGGTAC             TTTTTTTGCCGGGGC 100 63
IRT44_RS04870 NONE
        lplT 1041711 .. 1041749 + -22.6  -3.08813   GCCCGGGCCTGTGAT   GAAAGAAGCCGTGACGCG CTT CGTGTCACGGCTTCTTGC   TGTGTTGAACTGCCG 100 27
IRT44_RS04885 1043502 .. 1043518 +    -8  -5.02074   GAAACGATCAAGAAA              CCTCCT GATAA AGGAGG              TTTTTTACACCGTGC  90 46
IRT44_RS04915 NONE
IRT44_RS04920 1051518 .. 1051559 + -12.3  -4.42619   CAGCAGAATGGAAAA CCCCTTCCCGCCGTACG TTCGCTTC CATACGGTGGAAAGGGG  TTTTGTCAAATCTTA  95 48
IRT44_RS05010 NONE
        istA NONE
        istB NONE
IRT44_RS05025 1073811 .. 1073836 +  -6.8  -3.26596   GTCATTTTAAAAGGC         ATGGCCATCC TTTATT GGATGGCCGC          TTGCATTGCTTTCGC  58 61
IRT44_RS05070 1081685 .. 1081699 +  -2.1  -4.11216   CCACTTTCAGTCCCC              GC-TCC TCCA GGACGC               TTTTCACCGTGAGCC  59 140
IRT44_RS05105 1089441 .. 1089469 + -11.7  -3.23335   TATAACGCAAATGAA        GCCACCTTCCC TCTCATT GGGCAGGTGGC        TGTATGTTTATACGC  79 44
        yjcZ 1101982 .. 1102012 + -10.4  -4.02108   ATTGACCAAACGAAA       GAGGATGCAACCTG TGA CGCGTCGCATCCTC       TTTCCTTGTGCTCGC  84 185
        yyaC 1104430 .. 1104458 +  -7.6  -4.90906   ATTCTGATAAAAAAA       GACTTGT-TTCCT TACG GGGAATACAAGTC        TTTTTGCTGTTATGA  87 55
IRT44_RS05200 NONE
IRT44_RS05205 NONE
IRT44_RS05210 NONE
IRT44_RS05215 1108829 .. 1108858 + -13.7  -2.83921   TTCGTTGCAAAAAAA       CCGTCAGGGATATG TTT CGT-TCCCTGACGG       TCCTCTATTTGTGGT  79 58
        dnaN 1127215 .. 1127225 +  -5.4  -3.34398   CCTGCCGGTCCGGAC                 CTAC TAG GTAG                 TATTTGGAAAAGGAA  54 19
        yaaA NONE
        recF NONE
IRT44_RS05315 NONE
        gyrB 1130902 .. 1130923 + -10.1   -5.7946   TAGCAAACCGAAAAA           GCTTGTCCC AAAT GGGGCAGGC            TTTTTTTGTTGGGCA 100 102
IRT44_RS05325 1132214 .. 1132239 +  -8.9  -5.40072   CATTCCCATCTGCAA         CCCGGTTCGTC CTGA GATGGTCCGGG          TTTTTTTGCAAGCAC 100 11
IRT44_RS05330 NONE
        gyrA 1135500 .. 1135532 +  -9.3  -5.72254   CAGATTGGATAGATG     GGAAGGTTGTTCCA CTATGC TGGAAC-GCCTTCC      TTTTTTCTTATTTCG 100 49
IRT44_RS05340 1137108 .. 1137131 + -15.4  -3.88029   TTGTCTTCAGTCAAG          GAGGAACGGA GAGA TCCGTTCCTC           TGTTTTGTATAGCGT  95 385
IRT44_RS05345 1139090 .. 1139103 +  -6.7  -2.72471   TAAAAGTAAAGATTG               GCACA TTCA TGTGC                GTTGTCTGGTGACGA  53 107
         rrf 1139222 .. 1139246 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS05355 1142277 .. 1142308 + -15.3  -5.08255   TCAGGGAATGAGGTA      CAGCCTTCTCAAC CATGTC GTTGGGAAGGCTG       TTTTGTTTTCCCCCT 100 76
        guaB 1144995 .. 1145019 + -15.8  -4.96848   TTCACGATTGTGAAA          TGCACCCCCT ACAGC AGGGGGTGCA          TTTTTCTGTGCAAAC 100 61
IRT44_RS05370 1145330 .. 1145340 +  -3.2  -4.86133   GAAGCGTTCATAACC                 TTGC ACC GCGA                 TTTTTCGTCTATATA  70 28
IRT44_RS05375 1146819 .. 1146834 +  -2.6  -3.53298   GGCAAATAAGTGGTT              GTGTCGA AAA TC-ACAC              TTCGTTTACAATGGT  47 32
        pdxS NONE
        pdxT 1148424 .. 1148445 + -10.1  -5.60993   CACTCACACAAAAAA           CCGGTACCG CACG TGGTGCCGG            TTTTTTTGTCAACCG 100 46
        serS 1150182 .. 1150214 + -14.2  -5.71712   TCAGCATAGAAAAAA     CCGGCTCTCACGTCC ATTT GGATG-GGGAGCCGG      TTTTTTTATGTAACA 100 62
IRT44_RS05395 NONE
        aceB NONE
        aceA NONE
IRT44_RS05410 1153673 .. 1153688 +    -9  -6.23317   CCATTCCATGAAAAA              CCTTGG GAAT CCAAGG               TTTTTTTCTTTTTAT 100 38
IRT44_RS05415 1154456 .. 1154476 +  -5.4  -3.08278   ATAGGCAGGAGCATA           GG-GGATGC AGCA GCGTCCTCC            TCCTTTATGTGCTCT  51 42
IRT44_RS05420 NONE
IRT44_RS05425 1155846 .. 1155872 +   -16  -3.69354   TGATAACAAACGAAA         GCTGGGTATACT CTC GGTATACCCAGC         TTTCAGATTATAACC 100 67
IRT44_RS05450 1159241 .. 1159263 + -13.4  -3.02166   GGACTTACGAACAAA           GCGCCGGACA TTG TGTACGGCGC           TGATTTGCTTGGAAA  80 43
IRT44_RS05465 NONE
IRT44_RS05470 1160997 .. 1161035 +  -8.7  -3.49182   GTGCCGTGAGAAAAA   GCGGTTTCCCCAAACGG ACGAG CCCACGGGGGAAACCGC   TTCGTTGTGCTGTCT  69 32
IRT44_RS05505 NONE
        tadA 1167961 .. 1167987 + -10.9  -3.83568   CTGCGGATGAAAAAA         CAGCCCGGT CAGGATTAA ACCGGGCTG         TTCTTCTGGATATGG  82 8
IRT44_RS05520 1168961 .. 1168985 + -16.5  -5.04222   CAAATCGTACGCAAA          GCACAGGTTGG CAG CCAGCCTGTGC          TTTTTGATTTACTTG 100 43
        hmpA 1171506 .. 1171526 + -14.1  -5.24989   ATATGATCGCCAAAA            TCCTCCGTA TTT TACGGAGGA            TTTTTTGCTGTGTGA 100 45
IRT44_RS05540 1173455 .. 1173491 +  -9.3  -2.54919   CGGGCATGAAGTGCA    GAAAGCGGCAGCCCACG TCA CGTGAGGGGACGCTTTC    CTGTTATGGATGGCT  61 1
         ffs 1173836 .. 1173860 + -14.4  -5.59655   TCGAAGAACATCAAG          TGGCCTGTTC ATGAG GAACAGGCCA          TTTTTTGTTGATTTC 100 46
IRT44_RS05550 1175468 .. 1175490 +  -8.4  -4.99043   GGTTATCCGGCCCGG           CGTCCCGT CATCCGT ACGGGGCG           TTTTCTTTGTAAGAG  90 45
IRT44_RS05560 NONE
        recR 1178237 .. 1178253 + -10.1  -5.56264   GTAGGACAAGAAAAA              GACGGGG ACT CCCTGTC              TTTTTTGTGTTTGCA 100 37
IRT44_RS05570 1179286 .. 1179296 +  -3.2  -2.94144   TCAACAATCTGACCG                 GTGT GCT GCAC                 TACTTTCACTGAAGG  42 3
IRT44_RS05575 NONE
IRT44_RS05580 1179857 .. 1179869 +  -4.7  -3.84246   TCAGTCAGCAAAAAG                GCGAC ACT GCCGC                TTTCGTACTTGACCC  59 52
IRT44_RS05590 NONE
IRT44_RS05595 1182033 .. 1182053 +  -8.3  -4.87318   CACGTTCGGCCAAAA            GGCATCG ACACCCC CGATGCC            TTTTTCCGTTTTGCG  87 42
IRT44_RS05600 NONE
         tmk 1184237 .. 1184251 +  -5.6   -2.9348   TGAAGAGGCGCTGGC               TGCGCT GGA GGCGCG               TCTGTAAGGTTTAGG  49 4
IRT44_RS05610 1184738 .. 1184751 +  -3.8  -4.60889   TTCTAGGCGTCAGAT               GGAG AGCCCC CTCC                TTTTTCAGCCTGCTT  68 35
IRT44_RS05615 NONE
        holB NONE
IRT44_RS05625 1187051 .. 1187066 +  -4.6  -3.64703   GCTCGATGAGATTGT              CGTAGG TCAT CCGACG               TTTGACTGACGAGAG  54 1
        yabA 1187514 .. 1187539 +  -9.7  -4.56597   ACGGCCTGTACCGAA         GCGACCTG-AGC ATT GCGGCAGGTCGC         TTTTTGCAGACAACG  90 49
IRT44_RS05635 NONE
IRT44_RS05640 NONE
        rsmI 1189897 .. 1189918 + -17.3   -5.2197   TCTTCAGTCTAAAAA           GGCCGGGGA GTCA TCCCCGGCC            TTTTTCGTTTTTATG 100 413
        metG NONE
IRT44_RS05660 1193838 .. 1193876 + -10.3    -5.055   ATTATTATGACAAAA  GCCCTTCTGTGAACGCGC ATCA GCGCAT-CGCAAAAGGGC   TTTTTTGCCAATTCC 100 55
IRT44_RS05670 1195344 .. 1195365 + -14.5  -3.83347   ACACAAGCCTTAATG           GACAGGAGC CTGC GCTCCTGTC            TTCTGTTTGCCGTCT  93 28
        rnmV NONE
        rsmA 1196951 .. 1196972 + -15.9  -4.13748   ATCGACCATGAGGAA           CGCCCCTTG GATA CAAGGGGCG            TTTGGTATTTTTGGG 100 30
IRT44_RS05685 1197472 .. 1197506 +  -5.7  -5.67967   TTCGTATTACTTTTG     TACAGCAGTAGGGCC CTGGC GGCTCTGCTGTTTTG     TTTTTTTCTCCTGCT 100 15
IRT44_RS05690 1197849 .. 1197864 + -11.8  -3.76778   TAAACTCGTTGACAG              GCCGGG GAAA CCCGGC               TTCTTCCTGCGTTTT  85 38
IRT44_RS05695 1199264 .. 1199302 +  -3.1  -2.79796   CCGGAAAACAGCGAT  AGGCTTTTCTTCCGT-CC AACT GGCACGGCAGAGAACCCC   TGTGCTACAATAAGA  41 24
        ispE NONE
        purR NONE
IRT44_RS05710 1201537 .. 1201566 + -10.8  -5.07107   GTGTAGAATAATCAA       AAAGTCCGACAC CAGGCC GTGTCGGACTTG        TTTTTTGCGCATTTG 100 50
       spoVG 1202008 .. 1202032 + -13.6  -4.44667   CAAGTCCAGCAAAAA          GCACCCGGTC TCGAC GACTGGGTGC          TTTGTTCTTGCCGAA 100 43
        glmU NONE
IRT44_RS05730 1205782 .. 1205835 +  -9.8  -5.60993   GACGATTGAAATACG CCTCCGCTGGACAAGCTAGGGAGA AGGAAGAA TCTG-CTAGCT-GTCCAGAGGAGG TTTTTTTGTGGAAAC 100 54
IRT44_RS05735 1206667 .. 1206684 + -10.5  -5.38047   TTGTCTTCAGTCTGT             GCCCCGG ATGT TCGGGGC              TTTTTTATGTAGGTG 100 226
         pth 1207440 .. 1207455 +  -5.4  -2.99471   GCCTGGGGGTGTATT              GCGAGT GAGC ATTCGC               TATGTCTGCCGCTGC  49 137
IRT44_RS05745 1207754 .. 1207776 + -10.6  -4.19746   GCTTGCAAGGACAAG           GCCTTGGCTT CTT GAGCTAAGGC           TTCTTTTCGCATGAC  88 105
         mfd 1211353 .. 1211378 +  -6.2  -4.07568   ACACCAGTACGGAAA        GCACCG-TCTCC TGAG GGAGAACGG-GC         TTTTCGGGAAGGGAG  66 12
IRT44_RS05755 1212518 .. 1212537 + -12.2  -5.50313   ACGTCTTCAGTCTGA            CAGGGAAC TCAG GTTCCCTG             TTTTTTCGTTTTCTC 100 82
       spoVT 1213287 .. 1213307 + -11.1  -6.60575   CAGTAACACGTCAAA            CAGCCTCGT GCG GCGGGGCTG            TTTTTTTTTTTACGT 100 35
IRT44_RS05765 1215038 .. 1215056 +  -5.2  -2.52464   GCTGCTGGAACGGAT             TGGTCTGC TGC GCGGACAA             TGAGTTGAGAAGGAA  47 4
        mazG NONE
IRT44_RS05775 1216863 .. 1216882 +  -8.6  -5.35224   GAAAAGGAAGAAGAG            GACTACCT CAGA GGGTAGTC             TTTTCTTTTTCTAAC 100 8
IRT44_RS05780 1217720 .. 1217736 +  -2.2  -3.88137   GGAGAAAGCGGTTCG              CAGGGA TTTGT TACCTG              TTTGTAACGACTTCT  53 106
IRT44_RS05785 1219859 .. 1219882 + -16.8  -3.36273   ACACGAAAGCACGCT          GCCCCGTTTC CGCG GAAACGGGGC           TTAGTGTTGGGGCAG 100 43
        yabP NONE
        yabQ NONE
IRT44_RS05800 NONE
IRT44_RS05805 1221721 .. 1221745 +  -7.2  -5.97575   CGAATCACCTGTCAG          CCGACGTT GACCGCCAA AACGTCGG          TTTTTTTTGTCCCTT 100 162
      spoIIE NONE
IRT44_RS05815 NONE
IRT44_RS05820 NONE
IRT44_RS05825 NONE
IRT44_RS05830 NONE
        tilS NONE
         hpt NONE
        ftsH 1231264 .. 1231282 + -11.7  -4.21922   GAACCGAAGGCATAA             GGAGCGC CGAGA GCGCTCC             TTTCCTTTTCCATAC  95 26
IRT44_RS05850 1232181 .. 1232204 + -11.8   -5.1861   GAATATATTATATTG          GACCAATTCC TATG GGAGTTGGTC           TTTTTTCCTGATGAA 100 51
IRT44_RS05855 1232954 .. 1232975 +  -5.1  -4.66537   GAACGGAATGAAAAA           GTGCAGG AGCGGCAG CCTGCGC            TTTTCTATTAGCAAA  73 209
IRT44_RS05860 NONE
        nadA 1234934 .. 1234968 + -18.6  -4.93365   GCAAACAGGAAAAAA     CCTGCACCCGTGTGCA CGA TGCGCGAGGGTGCAGG     TTTTTGCTTGTGGGG 100 53
IRT44_RS05875 NONE
IRT44_RS05880 NONE
IRT44_RS05885 NONE
IRT44_RS05890 1239019 .. 1239044 +  -9.7  -5.42198   AACGCATGAGCGAAA         CATGCTGCCTG AAAA TGGGCGGCATG          TTTTCTTTTTTGCCG 100 108
        nadB NONE
        nadC NONE
IRT44_RS05905 1242514 .. 1242554 +   -15   -3.9712   CGTGCGCAGTGGAAA GAGAAA-GCCGCAGC-TTCT TCA GGAATGCTGCGGCTTTTCTC TTTCTAGTAAAATAG 100 63
IRT44_RS05910 1243554 .. 1243589 +  -3.4  -4.54727   TTAGACTAAATTTTT   GGGGA-GGCTGTGATG AGCGCG CGT-ACAGCTTTCCCC    TTTTCCTTTAGGAAG  64 32
IRT44_RS05915 NONE
IRT44_RS05920 NONE
IRT44_RS05925 NONE
IRT44_RS05930 NONE
        sppA NONE
IRT44_RS05940 1249176 .. 1249195 +    -5  -3.42605   TTAACGGTCCGTTTC            CACTCG CTTATGTT CGAGTG             TCTCTTTTGCATGCA  54 80
IRT44_RS05945 1250024 .. 1250045 + -15.9  -5.63504   TTGTCCCCCGTCTGT           GCCGCTCCA CACC TGGAGCGGC            TTTTTTTGTCCCGTT 100 65
IRT44_RS05950 NONE
IRT44_RS05955 NONE
IRT44_RS05960 NONE
IRT44_RS05965 NONE
IRT44_RS05970 1255568 .. 1255578 +  -8.2  -3.48115   CTGTAATTTTTTTTT                 GCGG TGC CCGC                 TGTCTTTTGTCAGAG  65 35
IRT44_RS05975 NONE
IRT44_RS05980 NONE
IRT44_RS05985 NONE
IRT44_RS05990 NONE
IRT44_RS05995 1257926 .. 1257937 +  -3.6  -3.44672   CCGTAAAATTTATTT                GCGT CCAT GCGC                 TGTCTTTTCATACGG  50 35
IRT44_RS06000 1258352 .. 1258370 +  -6.8  -2.90496   GCGGATCATCCCCCA             TTTTTCCG ATA TGGAAAAA             TAATTTGACGAAGCG  54 4
IRT44_RS06005 NONE
IRT44_RS06010 NONE
IRT44_RS06015 NONE
IRT44_RS06020 NONE
IRT44_RS06025 NONE
IRT44_RS06030 NONE
IRT44_RS06035 NONE
IRT44_RS06040 1265262 .. 1265279 +  -2.1  -2.62263   TCATGTTTTCGGCAG             TTTG-TCA ACC TGATCAAA             TCATGTAAGGAGAGT  39 60
IRT44_RS06045 1265617 .. 1265661 + -10.1  -3.09516   AACAGGAAAGGGTGT ACAGGTCAGCGA-CGTTCAG CTTTCA TTGAACGATCGCTGACCGGC TTAGATGGTCAAGAC  68 140
IRT44_RS06050 NONE
IRT44_RS06055 NONE
IRT44_RS06060 NONE
IRT44_RS06065 1267372 .. 1267393 + -11.6  -4.96848   GACGTTTTTCTCCAA           GCATCCCG TCGTTT CGGGATGC            TTTTTGTGTAAAGCA 100 68
IRT44_RS06070 1268556 .. 1268576 +  -3.9  -5.75342   ATAAAGAATACGCAT            CCCCCTC CGTTTGC GAGGGGA            TTTTTTTTGCAGACA  93 53
        hslO 1269673 .. 1269705 +  -3.4  -4.09739   TGTAAACCAGGGTAC     CGCTCGTCGACCG CCTTTACC CGGT-GGCGATCG      TTTTGGAACGATTGC  56 36
        cysK 1270806 .. 1270824 + -10.2  -4.35958   TTGGACCAAATGAAA             CGTCGGCT TGC GGCCGGCG             TTCTTTATTTCATGC  89 55
        pabA 1273050 .. 1273070 + -10.4   -5.4833   AACGATAATGTGAAA            GCGCCTGA TGCAC TCGGGCGC            TTTTTTATTCAATAG 100 39
IRT44_RS06095 NONE
        tatA 1275093 .. 1275117 +  -7.8  -5.86976   CATCCGGCAGAAAAA          GGCGGTGCGT CCCGT GCGTACTGCC          TTTTTTCTTTTGTAG 100 55
        pabC NONE
        folP 1277334 .. 1277345 +  -5.8  -3.09505   GGACGCGATGTGCAA                GGGA GGCC TCCC                 TGTTGGATAAAATCT  53 4
        folB NONE
        folK NONE
IRT44_RS06125 NONE
        dusB 1279599 .. 1279620 + -11.6  -3.70902   ATTATCAGGACTCAA           GCTGCCAG TTCACC CTGGCAGC            TTTCCCTATGAAGCC  82 88
        greA 1280225 .. 1280262 +  -4.8  -2.78032   ACTTGTAATTCAGTA   CCACAAGGCGTACCTT AGAAAA AGGGTACGCCGTATCG    CTATTTTCCGCACGC  45 33
        lysS 1281843 .. 1281880 + -10.6  -5.53288   CTCGCGACTAGAGAC   CAGAAAAACCGTCCGG GAAGTG CCGGGCGGTTTTTCCA    TTTTTTTCACTTGCA 100 30
IRT44_RS06145 1283724 .. 1283738 +  -4.2  -2.73124   GTGCGGATGGATCAC               CTCCTT TCT ACGGAG               CTTTGGCAAGTCAAC  45 19
IRT44_RS06150 NONE
IRT44_RS06155 1284099 .. 1284115 +  -8.1   -2.8499   TTGATAGCAAGACGG              CTAATGT GGT ACATTAG              TGCTTGCTGTTGAGT  59 61
         rrf 1284253 .. 1284277 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS06165 1287350 .. 1287374 +   -13   -5.2696   TCAGGGAATGACGGT          CCCCTTAACT CAAGC AGTTAAGGGG          TTTTTTGCATTTTGC 100 75
IRT44_RS06170 NONE
IRT44_RS06175 1289735 .. 1289765 + -10.5  -5.22258   TGTCTTCAGTCTGAA       ACCATCCCTAAAC CTTCC GTTTGGGGATGGC       TTTTGTTTTGGTTTC 100 377
IRT44_RS06180 NONE
IRT44_RS06185 NONE
IRT44_RS06190 NONE
IRT44_RS06195 1294569 .. 1294594 +  -9.8  -5.60993   AATTCAATAAGGAAA         GAATGCCTCC AAAACA GGAGGTATTC          TTTTTTTGTGCACCC 100 39
        radA 1296277 .. 1296287 +  -2.4   -3.3761   TCATAGTTAGTGAAG                 ACGC CAA GCGA                 ATTTTGTTCGCCAAC  46 279
        pssA 1298033 .. 1298050 +  -8.4  -5.80364   GACTGCCGAAAAAAA             CCCGCT CGCAAA AGCGGG              TTTTTTTGTTGAAGT 100 110
        ispD NONE
        ispF 1301123 .. 1301158 +    -7  -2.76823   TCAGTGATGCAGACC    CGGAAACATGGGC AACGCAGTCCA GCCC-TGTTTCCG    CCTTTTTTACACCTT  53 65
        gltX 1302935 .. 1302974 + -17.8  -5.61881   GAACCGCGGTTAACA  CCGTCTCTGCCTCCTTCG TACG CGAAGGCGGCCGGGGCGG   TTTTTCTTTTTCCAA 100 297
        cysE NONE
        cysS NONE
IRT44_RS06250 NONE
        rlmB NONE
IRT44_RS06260 NONE
        sigH 1307499 .. 1307526 + -10.8  -5.88565   TATCTGGAAGGACGA        GAGATTCATCTGT GAT ACAGA-GAATCTC        TTTTTTTATTCTGGA 100 11
        rpmG NONE
        secE 1308166 .. 1308179 +  -8.1  -3.39327   AAGCCTAGGAGGGAC               GGACG GAAA CGTCC                TTGTGGATATGGAAA  65 47
        nusG 1308734 .. 1308764 +  -6.2  -5.08255   GATTAGGAATGATCT       TGAAAAGTATCGCG TGA TGTGGTACATTTCA       TTTTGTTTTAAAAAT  86 35
        rplK 1309418 .. 1309444 + -10.1  -3.52113   TAATGGTGCAGTTGT         GAGGGGGTACA GGTAA TGTGCCCCCCC         TGTTTGTGGGAGGAT  74 38
        rplA 1310359 .. 1310382 + -13.2  -4.31587   GACGATAGAACATTA          TGCCCTCGTG TGTC TACGAGGGCA           TTCTTCTTTTTCGAG 100 204
        rplJ NONE
        rplL 1311410 .. 1311432 + -15.6  -4.53303   TCCGAAACGGAAACA           TCCCCTTGCC TGC GGCAGGGGGA           TTTTCTGTACACATG 100 48
IRT44_RS06305 1312250 .. 1312281 +  -2.4  -5.58522   AAAATAGAGTTTCTC      TGGGTTAAAAATGGT GTT ACTGCTTT-AACCCA      TTTTTATTTTGTGTG  84 197
        rpoB 1315877 .. 1315890 +  -3.7  -2.95521   AGATTCCGGTACAAA               GGGAG GTAA CGCCC                TGTGATTGATGTGAA  45 40
        rpoC 1319535 .. 1319560 + -16.9  -4.06419   CCGTGACGCAAGAAA         GGTGCCCTTCC GCTC GGGAGGGCACC          TTGTTTATCAAAAAA 100 42
IRT44_RS06320 1319932 .. 1319969 +  -6.3  -4.32857   AGAGTGGTTAACGAT   GTTTTTGTTGGCGATCC CTGT GGGTTGCTTGCAAAGAC    TTTCTATTTGACCCA  71 30
        rpsL NONE
        rpsG 1321017 .. 1321039 +   -12  -3.07013   TGGTAGTATCCAAAG           CGGGTGTCCG CTT TGGATACCCG           TATATTCCCACACTC  77 35
        fusA 1323189 .. 1323229 +  -2.6  -4.17556   TCTTGAAACGAGAAA  GGTTTACAATATTGAGGG GACAA CCGTTGATAGGGTAAACC  TTTCTTCACCCTATA  57 59
         tuf 1324486 .. 1324507 + -15.9  -5.38497   CCACTCACAAACAAA           CCCGACAGC GTAG GCTGTCGGG            TTTTTTCATTTACCT 100 43
        rpsJ 1325979 .. 1325993 +  -2.1  -3.01712   GTAGTAAATGTGATA              C-ACGC GCGG GCGTTG               TCTTAACGAACGCGA  41 42
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN 1331214 .. 1331229 +  -5.4  -3.57651   TTCATGAAGATCATC              TCTCTG GCTC CAGAGG               TTATCTAATCTGAAC  56 2
        rplX NONE
        rplE NONE
IRT44_RS06425 1332390 .. 1332404 +  -2.1  -2.87963   CTGGTAATTTGAAAC               GGGAA GGAGG TTCTC               TCTCATGGTTATGAC  41 34
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
IRT44_RS06465 NONE
         map 1337735 .. 1337756 +  -4.4  -3.18199   CTATGAGATTTTAAC           GC-GGGCGT AGCCG ATGCCCAGC           TTCGCTTCGGAATTG  48 16
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 1339118 .. 1339166 + -17.5  -4.08064   CAAACGGTAAACCGC CGGGGAAATTCCTGAGTGGGCTG GAT CAGCCCACCCAAGAATTTCGACG TTTTGAAGGAGGGTT 100 111
IRT44_RS06495 1340171 .. 1340188 +  -7.7  -3.64103   CCGTCCTCACGGGTA             TTCCCTC TGGA GAGGGGA              TTTCAGATCTGGCTC  64 64
        rplQ 1340635 .. 1340680 +  -2.5  -5.92399   ATTGATTGTGAAAAA GGGTGGGGA-CAGACTCTGGTC TTA GGCTGGACTCTGATTCATGCCC TTTTTTCTTTTCTTG  95 49
IRT44_RS06505 NONE
IRT44_RS06510 NONE
IRT44_RS06515 NONE
        truA 1344012 .. 1344030 +    -3  -3.15236   GCGATTTTCCAGCCG             TTGGGGAG GAA CTCCGCAC             TTGACTCTGCCTTTC  44 70
        rplM NONE
        rpsI 1345107 .. 1345132 + -13.3  -4.13748   GTTTCAAGGATTATT         GCCCTTGGCCA GTAT TGGTCAGGGGC          TTTCCTATTTTTCCG 100 49
        cwlD 1345990 .. 1346004 +  -6.4  -2.87468   GCGCCCGCAAACGTG               TCCAGC CCT GTTGGA               TATGCTATAATGGAC  52 43
IRT44_RS06540 1347204 .. 1347228 +  -9.3  -4.87893   AAGGGAAAACATAAA          GGTGGGCTC TTGATCC GAGCTCACC          TTTTTCCTTAGGATT  91 39
IRT44_RS06550 1348559 .. 1348581 + -14.9  -5.32565   TGGTAAAACGGGAAA           GCTGACCGC TGTCT GCGGTCAGC           TTTTTTCCTTACTTG 100 21
IRT44_RS06560 1350139 .. 1350174 + -23.6  -3.28712   ACGCAATAGCGATGG    CAAATGCCCTCTGATC AGCG GATCAGAGGGCATTTG     TTGTGGGACCGGGGC 100 32
IRT44_RS06565 1350571 .. 1350587 +  -2.2  -2.69257   CGCAGAAGTTCACAA              CAGGAA TATTT TACCTG              ATAATTTTTTTGAAA  39 8
IRT44_RS06570 1352379 .. 1352392 +  -3.7  -3.64703   GCTGTTCAGTTTTGA               GGGAG CATA CCCCC                TTTGGATAAAAGAGG  52 72
IRT44_RS06575 NONE
IRT44_RS06580 1352699 .. 1352715 +  -8.1   -2.8499   TTGATAGCAAGACGG              CTAATGT GGT ACATTAG              TGCTTGCTGTTGAGT  59 61
         rrf 1352853 .. 1352877 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS06590 1355889 .. 1355911 +  -2.7  -2.51133   CCATGCATGTCCAGT           TTTGAAGGC GCGAA GTCTTCAAC           GTTCCTCGGTAGCTC  40 58
IRT44_RS06595 NONE
IRT44_RS06600 NONE
IRT44_RS06605 1356171 .. 1356221 +  -3.2    -3.224   TATAATGAAGTGGGT CCCTGCAAAGCATAGGGAATGT ACTTTCA ACCATCCCGAAACTTTGTAGGG TGTTGTGGAGGCTTA  46 41
IRT44_RS06610 NONE
IRT44_RS06615 NONE
IRT44_RS06620 1356514 .. 1356530 +  -2.2  -3.15249   ACCCCAGCCATTTCC              ATGAGC CATTA GCTCAG              TTGGTAGAGCATCTG  42 31
IRT44_RS06625 NONE
IRT44_RS06630 1356742 .. 1356753 +  -2.2  -3.97368   ATGTGTGAGGTTAGG                CGTG AGAA CATG                 TTTCTCACTTCCCCC  55 50
IRT44_RS06635 NONE
IRT44_RS06640 1357014 .. 1357038 + -11.4  -5.71712   TTCCATCGTGTAAAA          CGGGCAGCCG CTTAT CGGTTGCTCG          TTTTTTTCTGTACGC 100 40
        rocF 1358122 .. 1358146 + -11.4  -5.27938   GCTGTAAGAAAAGAA          GCGAGGGACC CGTGA GTTCCCTCGC          TTTTTGTTTCCGCAT 100 34
        sigW 1359061 .. 1359074 +  -4.5  -3.01726   GGTCGAGAAGCCTTG               CGCAG CAAG TTGCG                ATTTATGTAGGAAAG  47 2
IRT44_RS06660 1359754 .. 1359775 +  -8.7  -4.56597   GTATAGTTACATGCA           GCACGGC AAAAAGCA GCCGTGC            TTTTTCCGCAGGAGA  86 54
        cdaA NONE
IRT44_RS06670 NONE
        glmM 1363363 .. 1363373 +  -5.4  -4.80882   GTCGTGGCTGCGAAA                 CTGT GAT ACAG                 TTTTTCATGTGCCAT  76 106
        glmS 1365619 .. 1365670 + -15.3  -4.07687   AAAATAAATCATGTC CACGAAGCCGAACGGTG-TCAGGG TACAC CCCTGATCACGGTTCGGCTTCATC TTTTGAAAACGGGCT 100 70
IRT44_RS06685 1366348 .. 1366382 + -13.7  -4.17878   CCTTAGTTTTTTAAG     CAGCCAGTTGCCGAT ATTGA ATCGGTGACTGGTTG     TTTAGTTTCATTTGA 100 80
IRT44_RS06715 1371264 .. 1371283 +   -10  -4.90906   AGAAGCAGTTGCAAG            GGACCTGA GAAA TCGGGTCC             TTTTTGGTGTTCTAG 100 58
IRT44_RS06720 1372827 .. 1372874 +  -6.3  -5.27335   CAGGAAATTGTCCAG GAAGCCGAGCGTGGCAGCAGAG AGCTG CCTTGAT-CCATGCTGGGCTTC TTTTTCTTTACGGGA  90 419
IRT44_RS06725 NONE
IRT44_RS06730 NONE
IRT44_RS06735 NONE
IRT44_RS06740 1377201 .. 1377241 +  -6.6  -4.66535   ATGCCGGACAGACGC  AAAGAGCCTCCACCCGCC GCAAA GACGGGAGGAGGCTCACA  TTTATTTTGCAGATT  79 190
IRT44_RS06750 1379103 .. 1379119 +  -2.2  -3.53012   ATGGTAACCAGAGAG             GCTG-CC AACG GGACGGC              TTTCAGCCCGCCGCC  47 327
IRT44_RS06770 1383253 .. 1383289 +  -6.7  -5.22943   TTCCGAGCGTCCGCA    GACTCTCCACTATTT CCCAAAC GAATGGTGGAGAGTA    TTTTTTAAATTTACT 100 48
IRT44_RS06775 NONE
IRT44_RS06780 1385356 .. 1385369 +  -6.7  -2.72471   TAAAAGTAAAGATTG               GCACA TTCA TGTGC                GTTGTCTGGTGACGA  53 107
         rrf 1385488 .. 1385512 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS06790 1388596 .. 1388630 + -15.8  -5.47431   GAACGTAAACGAAAA     CCTCGTCTCTTTTTCG CAA CGGGAAAGAGGCGGGG     TTTTTTGTGTGTTGA 100 85
IRT44_RS06795 1389658 .. 1389684 +  -4.5  -4.73614   ACCATAACGCGAATA        GCTGTCTCTTCCT GCA AGG--GAGGCAGC        TTTCTTTTGCTCCTA  70 34
IRT44_RS06800 NONE
IRT44_RS06805 1392212 .. 1392231 +  -4.2  -2.64739   GTTCATGGTTTTTTC            CCACTTCG CTCA CGGAATGG             CTATCTTTTCCCGTT  44 87
IRT44_RS06810 1392699 .. 1392716 + -11.3  -5.79595   TATCCATATATGTCA             GGACGGT TTTT ACCGTCC              TTTTTTGTTTTGGCG 100 98
IRT44_RS06820 1395240 .. 1395260 +  -3.9  -5.26316   GGGCCTGTCGTTGGG            CGCCGTTGA TGT TCAGGGGTG            TTTTTTCTGGCCTGC  82 56
IRT44_RS06825 1396874 .. 1396902 + -16.8  -4.39696   TGCTCGATATGACAA       CGGTCTCCTCCCG CTGA CGGG-GGAGACCG        TTTGTTCGTTTCGAG 100 9
IRT44_RS06860 NONE
IRT44_RS06865 1403397 .. 1403422 +  -8.2  -5.40072   CAGCGGCCGCCATTG         TGCGCTGTCC AAAAAC GGACGGCGCC          TTTTTTTGGCAGAAG 100 56
IRT44_RS06870 NONE
IRT44_RS06875 NONE
        copZ NONE
IRT44_RS06885 NONE
IRT44_RS06890 1408355 .. 1408384 + -14.3  -5.27779   GTAATTACAGTGCGC       CCACCGTTTCCCT TTCC GGGGAGGCGGTGG        TTTTTTCGTGTTGGC 100 37
IRT44_RS06895 NONE
IRT44_RS06900 NONE
IRT44_RS06905 NONE
        treR 1413804 .. 1413841 + -16.7  -3.06483   TTTTGCACATGCTTA   CTTGTTTAAACAAGTAT TGAC GTACTTGTTTAAACAAG    TGTATGATTTGAATG 100 51
        treP 1415311 .. 1415364 + -11.9  -3.28791   AAAAGAGAGAGATGG TGAGCA-TAGCAACCGATCTGCAGGG GGT TTTGGCAGATTGGTTGCTATTGCCCA TTATGGAAAAGGAGT  79 43
        treC NONE
IRT44_RS06925 1418163 .. 1418181 +  -2.4  -6.48081   ATTGCCTGTGTGACT            GCGGGAG GAACGG CTCC-GC             TTTTTTTTTTGTCGA 100 207
        mglB 1419375 .. 1419400 + -14.1  -3.77666   TCTCTGCCGGTGCCC         GAAGGCTTGGC AATC GCCAAGTCTTC          TTTACATTCCATATA  93 44
IRT44_RS06935 1421121 .. 1421155 +  -3.5  -3.99324   ACATTTTGCTGCAGT    CTTC-CACCC-GGGCAA TCA TTGCCCTGGGCGCGGCG    TTTGTGCTGATCACG  59 186
        ytaF 1422758 .. 1422786 + -13.9  -5.24129   AGTCCGGGAGATACA        CCCCGTCCTTC CCAAAAT GGAGGACGGGG        TTTTTTATGGCGAAA 100 39
IRT44_RS19320 NONE
IRT44_RS06950 1425807 .. 1425824 +  -8.4  -3.06991   TGGCGCCGACGGGGC             CGTCGC CTGATC GCGACG              CTTTTGGCCGTGATG  62 95
        yunB 1426639 .. 1426663 +  -3.6  -2.60508   GAGGGTTTTTGAAAT          GGCTCTCTTT TTTTC AAAGAGACTC          CGTTTTTACACAATG  43 192
IRT44_RS06960 1428111 .. 1428134 +  -8.8   -4.9725   CGGAATGGAAAAGAA          CCGGGATGGC ACCT GCTGTCCTGG           TTTTTCTGTAAGAAT  93 95
IRT44_RS06970 NONE
IRT44_RS06975 NONE
IRT44_RS06980 1432013 .. 1432031 + -11.7  -5.26119   TGAATAGAGAAGACA             GACGGCG CATAC CGCCGTC             TTTTCTTTTTGGCCA 100 34
IRT44_RS06985 NONE
IRT44_RS06990 NONE
IRT44_RS06995 1434534 .. 1434572 + -12.6  -4.90471   TTGGCACATGAAACA  GGGACGGTTCACGCAGCG TATTC TGCT-CG-GAACCGTCCC  TTTTATGTTTTCGAT 100 51
IRT44_RS07005 1436193 .. 1436231 + -21.1  -3.68244   CAGGCGAAAACGAAC  AAGCCGGCAGCCCG-TCC ACGT GGAGCGGGCTGCCGGCTA   TTTGCCGTTCGTGGT 100 58
IRT44_RS07025 1441040 .. 1441082 + -19.5  -3.29461   GGCTGTGTCTGCAAA CGAACATCCCTCTCTT-TCC TGCG GGAGAAGAGAGGGATGTTTG TTGTGGCAAAGATTA 100 58
        rpmG 1446240 .. 1446259 +   -15  -3.53343   TGACCAAAAAAATTG            GCCGGGAC TGCT GTCCCGGC             TTTCGGCGGCGGATT  91 56
IRT44_RS07065 1448746 .. 1448756 +  -3.2  -4.65895   GGGTGGAGCGTGTTT                 TTCG ATG CGAG                 TTTTTCCATGCCGGG  66 106
IRT44_RS07075 1449596 .. 1449622 + -12.3   -4.4767   CGACAGTTAGAAAAA         CCCTGGCCG TTTGCCGTT CGGCCAGGG         TTTTGTCATACATGC 100 120
IRT44_RS07090 1451612 .. 1451633 + -10.9  -5.63236   TGCGGTTTGACAAAA           CACTCCCTT GAAG AGGGGAGTG            TTTTTGTTTTTGGAT 100 15
IRT44_RS07095 1453139 .. 1453167 + -17.5   -5.4505   TCAACAGGCAGGACT        CCCCGGCACAG TATAAGT CTGTGCCGGGG        TTTTTTGTTCAGCAG 100 95
IRT44_RS07100 NONE
IRT44_RS07105 NONE
        clpP 1455000 .. 1455018 +    -3  -4.09685   GTATCCGTTCGGGAG             GGGAATCC GGC GGTTTACC             TTTTGCCGGATCAGC  58 177
IRT44_RS07145 1461908 .. 1461919 +    -3  -2.70932   TCCCTTATCGTTTTT                GTAT CGAT ATAC                 TGATTACAAAGAGAA  40 115
IRT44_RS07150 1463115 .. 1463140 + -11.9  -4.19735   TTTGCGCTTTTGACG         GGAGCAG-CCCT GTG GGGGTCTGCTCC         TTTCATTTTGGGCAG  95 65
IRT44_RS07155 NONE
        pfkB NONE
IRT44_RS07165 NONE
IRT44_RS07170 1467255 .. 1467283 +   -14  -4.12942   CAGACCGCCTAAAAA       CTCCCTCTTCTGC AAGC GCAGA-GAGGGAG        TTTTGACACATTTGC 100 79
IRT44_RS07180 1470040 .. 1470066 + -16.7  -3.93166   GACGACCAGCAAACT         GGAACTCTCCC GTATA GGGAGAGTTCC         TTGCTTTTTTGGGGA 100 118
IRT44_RS07185 1471398 .. 1471425 + -11.4  -5.75342   CCGACTAGACCACTA        GAGGTTTTTCCC CAAA GGGAGAAATCTC         TTTTTTTTCAGCCGG 100 197
IRT44_RS07190 NONE
IRT44_RS07195 1472159 .. 1472181 +  -8.4  -5.52347   AGCGAATCTTCATGG           GGCACGGG ACAGAAA CCCGTGTC           TTTTTTCATTTTCTT 100 63
IRT44_RS07200 1473378 .. 1473392 +  -3.5  -3.54653   GCGTCTCGTTTTGGA               GCGGA CATCA TTCGC               TTCTGTGCTGGGCGT  52 356
IRT44_RS07225 1478766 .. 1478790 + -16.5  -3.72576   CCTGCAATAGAAAAA          CAGCGAAGGGG AAC TCCCTTCGCTG          TTTGATGCAAACGAA 100 105
IRT44_RS07235 NONE
IRT44_RS07240 1481749 .. 1481759 +  -8.2  -3.43328   CCTGACGTGTTCAGT                 CCCG GGG CGGG                 TTCATCTGTTTCATG  65 102
IRT44_RS07250 1484145 .. 1484160 +  -7.6  -2.72829   GTGAAAGTGTCGGAA              CCCATT CTCC AATGGG               CTTTCACGGGATATA  56 55
IRT44_RS07255 1484666 .. 1484691 + -14.1  -3.40309   ACATCGAACATGAGG         CAAGACGCTCCG CTG CGG-GCGTCTTG         TTCTGCGTGGTTGTA  88 40
IRT44_RS07260 1485727 .. 1485753 + -18.2  -4.10744   AACCGCGGAGACAAA         CGCTCTTTTCCA AAA TGGAAAAGAGCG         TTATTATTTGAATGA 100 51
IRT44_RS07265 1486920 .. 1486953 +  -8.2   -5.4505   GCCCAATGTTTGTGA     TGACACCTCATCCGC GTGTA GCAGG-GAGGTGTCA     TTTTTTATTCAAGCA 100 77
IRT44_RS07270 1488351 .. 1488383 + -20.9  -3.12351   GATCGGATATCGATG      CAAACCCCTTTTTCA TGC TGAAAAAGGGGTTTG      TTCCGTATAGGGAGG 100 297
IRT44_RS07275 NONE
IRT44_RS07280 NONE
IRT44_RS07285 1490994 .. 1491017 + -16.8  -5.56264   CCGTCCCTCCTCTGA          CGCCCGAATC GGCT GATTCGGGCG           TTTTTTATGTTTGCC 100 43
IRT44_RS07290 1492813 .. 1492836 +   -14   -4.8487   AATAAGGGCAAAACC          GAGAAGCACA TGCG TGTGCTTCTC           TTCTTTTTTTCATCC 100 36
IRT44_RS07295 NONE
IRT44_RS07300 1493678 .. 1493705 +  -8.4  -5.26316   GCTGGGGCAAACGTT        GAGGCGTTCTCT TCCA AGGAAGCGCCTC         TTTTTTGTCAACTAA 100 24
IRT44_RS07305 NONE
IRT44_RS07310 1496150 .. 1496175 + -13.4  -5.88565   GCCAATAATGAAAAA         CGACATGTCC AATATC GGACATGTCG          TTTTTTTGTTATGGA 100 33
IRT44_RS07315 1497254 .. 1497298 + -10.9  -3.75295   TGGACAGACAATCGG CA-GCAGAATGAGGGGTGGG GGGGCA CTTGCCCCTCATTTTGCGTG TTTCGCTGATTTATA  80 41
        pstC NONE
        pstA NONE
        pstB 1499993 .. 1500038 +  -2.5  -3.06183   AACGGAAGATTATAT CA-GCGGCCGTTTCGGCTGA ATCTCCC TCTGTCGAATTGCCCGCATG TTGAATGCGACTAGC  42 7
        pstB 1500922 .. 1500945 +    -6  -4.86133   ATCGTAATATAAGAA          GAGCG-GCCTT TTT GAGGTTCGCTC          TTTTTCATGTATGTG  78 50
IRT44_RS07340 1502323 .. 1502346 + -14.6  -5.89921   AAACGGGTCGCTCAT          GGTCAGCCTG TGGA CAGGCTGGCC           TTTTTTTGTTGTGCT 100 39
IRT44_RS07345 NONE
IRT44_RS07350 NONE
IRT44_RS07355 NONE
IRT44_RS07360 1505998 .. 1506023 +   -12  -5.48825   TGTCTTCAGTCTGAA         GCGTTGAATC AAGAGA GATTCAACGC          TTTTTTTAACTGCTC 100 492
IRT44_RS07370 1506662 .. 1506681 + -12.1  -5.14819   TAACAGGAACAATCA            CCCCCGC TTTTTT GCGGGGG             TTTGTTTTTTGATTT 100 38
        acpS 1507348 .. 1507363 +    -4  -3.89614   ATTTCCCAGGAAATA              GACAGGG GTG CCCT-TC              TTTGTCGAAATTAGC  57 215
IRT44_RS07380 1508442 .. 1508459 + -12.7  -5.35459   GTAAATAATCAATCG             GGACGGC ATTC GCCGTCC              TTTTTTGTCGTGTAT 100 33
IRT44_RS07385 NONE
         alr NONE
IRT44_RS07395 NONE
IRT44_RS07400 1511151 .. 1511169 +  -9.6  -5.58454   CTCAGACAGCAAAAA             CCACTTGT GCA GCAAGTGG             TTTTTTTGCTGTCGG 100 55
IRT44_RS07405 NONE
IRT44_RS07410 NONE
IRT44_RS07415 NONE
        rsbW NONE
        sigB 1514326 .. 1514346 + -13.3  -5.15634   TAACGCAAACGACGG            CGGAGGTGG AGA TCACCTCCG            TTTTTTGGTCCGATG 100 38
IRT44_RS07430 1516882 .. 1516900 + -10.2  -2.78679   GTTCAAAAACTCAAG             CTGCGCCT GCA GGGCGCGG             ATTTCCGTGAGCAGG  63 321
IRT44_RS07445 1517889 .. 1517909 +  -3.9  -4.21194   GTGGAAAAAGGAGCG            TTCGCGGTG GCG CACGACGAA            TTTTCGCTCATCCGC  61 138
        thiL NONE
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD 1521645 .. 1521676 + -14.5  -5.52384   CCTATCGTGATAAAA      GAGGGCTTGCGGA AGTGAC TCCGCAGGCTCTC       TTTTTTTCATAGGGA 100 31
IRT44_RS07475 1524968 .. 1524993 + -12.5  -4.33907   TCGATCTCCTCCAGC         CGGCGCTGACG CTGA CGTTCGCGCCG          TTTTGCCTCTTTGTC  93 350
IRT44_RS07485 1527493 .. 1527509 +  -3.6  -4.55721   ATCCGCGCTGAGTGG              ATGCCG GTCTG CGGCAA              TTTTGTGTCAGGTTT  66 30
IRT44_RS07490 NONE
IRT44_RS07495 NONE
        tatC 1530328 .. 1530384 + -10.4  -2.96157   CGAAATTAGAGTGCA CCCCTTAAAGTAGACATTGGAAAAACCC CTT GGGATAA-CCGATGT-TACTTTAAGGGG TGAATTTTTTATGGC  70 60
IRT44_RS07510 NONE
IRT44_RS07515 1531543 .. 1531564 +  -3.5  -5.14477   GAGTACAGGCGTCAG           CATGCGGCC TAAC GGCCGGGGG            TTTTTTAAGTGTCTA  78 14
IRT44_RS07520 1532288 .. 1532307 + -13.6  -3.81414   AAAAAAGGGCAAACG            GGACGGGA GAAC TCCCGTCC             TTATTGCTTGAGCGT  90 75
       groES NONE
        groL 1535877 .. 1535902 + -14.1  -6.04953   ATACCGATTCAACAC         GAGAGGCAGAC AGCA GTCTGTCTCTC          TTTTTTTATTTGTAT 100 50
IRT44_RS07540 1537399 .. 1537437 + -12.6  -4.56775   TAAAAACAATTCAAG  CAGAGGTACAGTCAGGC CGGAGC GCTTGGCTGTACC-CTG   TTTTTCGGGAGGGGT 100 53
IRT44_RS07545 NONE
IRT44_RS07550 NONE
IRT44_RS07555 1540041 .. 1540071 +    -4  -5.54192   ACGGGTTGTGCCGGT      AGGAAGGCTTCGC TCTCTT GC-AGGCCTTCCA       TTTTTTTCACTTGCT  88 24
IRT44_RS07560 1541881 .. 1541895 +  -4.2  -2.73124   GTGCGGATGGATCAC               CTCCTT TCT ACGGAG               CTTTGGCAAGTCGAC  45 19
IRT44_RS07565 NONE
IRT44_RS07570 1542256 .. 1542272 +  -8.1   -2.8499   TTGATAGCAAGACGG              CTAATGT GGT ACATTAG              TGCTTGCTGTTGAGT  59 61
         rrf 1542410 .. 1542434 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS07580 1545483 .. 1545510 +  -3.6   -3.2794   AAAAAAAGATATTGA        CTTACTG-ATCAA GTT TTGGTATAGTAAG        TTAATGTCGGTGCAA  48 94
IRT44_RS07585 1547162 .. 1547176 +  -4.2  -2.73124   GTGCGGATGGATCAC               CTCCTT TCT ACGGAG               CTTTGGCAAGTCGAC  45 19
IRT44_RS07590 NONE
IRT44_RS07595 1547537 .. 1547553 +  -8.1   -2.8499   TTGATAGCAAGACGG              CTAATGT GGT ACATTAG              TGCTTGCTGTTGAGT  59 61
         rrf 1547691 .. 1547715 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS07605 1550729 .. 1550751 +  -2.7  -2.51133   CCATGCATGTCCAGT           TTTGAAGGC GCGAA GTCTTCAAC           GTTCCTCGGTAGCTC  40 59
IRT44_RS07610 NONE
IRT44_RS07615 NONE
IRT44_RS07620 NONE
IRT44_RS07625 NONE
IRT44_RS07630 1551204 .. 1551219 +  -2.4  -3.06796   TCGAATCCCCTACGG              GTCACC ATAT GGAGGC               TTAGCTCAGCTGGGA  42 19
IRT44_RS07635 NONE
IRT44_RS07640 NONE
IRT44_RS07645 NONE
IRT44_RS07650 1551595 .. 1551607 +  -3.4  -4.13014   TCCCGAACCACCATT                TCCT TTCAT AGGA                TTTTGCCGGTGTAGC  59 28
IRT44_RS07655 NONE
IRT44_RS07660 1551780 .. 1551796 +  -2.2  -3.15249   ACCCCAGCCATTTTC              ATGAGC CATTA GCTCAG              TTGGTAGAGCATCTG  42 31
IRT44_RS07665 NONE
IRT44_RS07670 1552028 .. 1552048 +  -5.4  -4.17657   ATAGCAGATCGGGAA            GGTTTGCG AATCG TGCAAGCC            TTTTACACTGTGATG  66 40
IRT44_RS07675 1552234 .. 1552261 +  -2.1  -3.32023   CCGCTCCATTATTTC       TG-CTCTCTGTAC GTGC GT-CGGAGAGACA        TCTTGCTTATGTGCC  44 33
IRT44_RS07680 1552371 .. 1552391 + -10.5  -5.71712   GCATATCGAACCGCA            GAGTAGGAG AAC TTCCTACTC            TTTTTTTCTATAAGC 100 48
IRT44_RS07685 NONE
IRT44_RS07690 NONE
IRT44_RS07695 1557138 .. 1557183 + -11.3  -5.40072   ACAAGTGTACACAAA CTGGGACTCT-GCCTCCGCGT CGGTAA AC-CGGAGGCGACAGTCCCGG TTTTTTTGGGGCCGG 100 180
        guaA 1559051 .. 1559077 + -10.1  -4.98531   GTGTGTTTTGTTCGG         AGTCGAGGCGT TGTTT GCGCCTCGACC         TTTTTCATTTGCCGC 100 259
IRT44_RS07705 1560504 .. 1560530 + -10.9  -5.47218   AAACAGCATCACAAA        GACTGTCGGCGC CTCG GCGC-GGCAGTC         TTTTTTTGCGTGAGA 100 41
        purE NONE
        purK NONE
        purB 1563761 .. 1563817 + -10.4  -2.96157   CAGGAATAGAGTGCA CCCCTTAAAGTAGACATTGGAAAAACCC CTT GGGATAA-CCGATGT-TACTTTAAGGGG TGAATTTTTTATGGC  70 73
IRT44_RS07725 NONE
IRT44_RS07730 1565002 .. 1565028 +  -5.9  -2.52742   GTTGGTTAGGTGGTA        GAGGG--GGAGCC GTA GGCTCCAGTCCTC        ATCTTCTCACGAAGT  49 25
IRT44_RS07745 1568341 .. 1568366 +  -6.1  -3.21726   TGTGGCAAAGAGGAA         AGTGGTGGATG ATCG CATCCGTCACA          TTAAGTATTGTAAAC  55 67
IRT44_RS07750 NONE
IRT44_RS07755 NONE
IRT44_RS07760 1570648 .. 1570661 +  -6.7  -2.55544   CAAAACGAATCAAGA               GCTTC CGGA GAAGC                TAGCTTAACTCATGC  52 9
IRT44_RS07765 NONE
IRT44_RS07770 NONE
IRT44_RS07775 1576168 .. 1576185 +  -8.5  -3.66844   CTGGCCCGTTTCCCA             CCTTACA AAAA TGTAAGG              TTCTTGAAATGTAAC  70 117
IRT44_RS07780 1576807 .. 1576829 +  -9.9   -4.8048   ATAGGAACCCCCCGA          GGGATGGACG ACAG CG-CCATCCC           TTTTTCGTGTGCCCG 100 37
IRT44_RS07785 NONE
IRT44_RS07790 NONE
IRT44_RS07795 NONE
IRT44_RS07800 1581441 .. 1581477 + -20.2  -4.44667   AAAGCGATCTGCGCA    GATCCCGCGCGGCAGG AGGCC CCTGCTGCCCGGGATC    TTTGTTGTTGGAGAA 100 46
IRT44_RS07805 1582110 .. 1582143 + -10.3  -3.13403   CGCTTTATTCGTTAA     AGACAATCGTTCCTG GCAG CAGGAACGGTTGCCA      TATTCATGCAACCCA  71 26
IRT44_RS07810 NONE
IRT44_RS07815 NONE
IRT44_RS07820 NONE
IRT44_RS07825 1586534 .. 1586548 +  -2.7  -3.04144   GCAGAAGGGAGGCAT               GAGGC ATGAA GCCGC               TGTTGGAAGTAAAAG  44 17
IRT44_RS07830 NONE
IRT44_RS07835 1588117 .. 1588137 +  -2.4  -3.24563   GGCGGCAAGGAGGGG            GCGGCATG ATTTA CCTGCAGC            TGTTCTGGGCGTTTT  44 17
IRT44_RS07840 NONE
IRT44_RS07845 1590359 .. 1590386 + -15.8  -6.11644   TGGAGCGATAACAAA        GCCAAAAGAACA GCAT TGTTCTTTTGGC         TTTTTTTTTCGATAC 100 94
IRT44_RS07850 1591220 .. 1591231 +  -3.6  -2.78384   TTCTGTTGTACATGG                CGGC AGCA GCTG                 TCTGATCCACCCGAG  44 9
IRT44_RS07855 NONE
IRT44_RS07860 NONE
IRT44_RS07865 NONE
IRT44_RS07870 NONE
IRT44_RS07875 1596576 .. 1596586 +  -4.6  -3.95073   ACATGGCCTTTAAAG                 GGGG TGA TCCC                 TTTCTCAGTCTGGCA  59 50
IRT44_RS07880 1596903 .. 1596931 +  -8.2  -3.28684   AGATCAGTCGGTGAA        GATGCAGGCG ACATCTTCA TGCCTGCATC        TTGCTATACATAATT  64 42
IRT44_RS07885 1598519 .. 1598532 +  -2.3  -3.81689   GCGTCACATTTTGAA               GCGGA CATA TCCAC                TTTAGTGCTGGTCTT  53 133
IRT44_RS07890 NONE
IRT44_RS07895 NONE
IRT44_RS07900 1603122 .. 1603152 +  -3.9  -4.64144   ACGTCAGTTTTCTGG      CTGCGC-TGGCCGG AGCC CCGGTCGTGTCCAG       TTTTTACAACTTATT  68 298
IRT44_RS07905 NONE
IRT44_RS07910 NONE
IRT44_RS07915 1604336 .. 1604351 +  -6.1  -2.64416   GATCCCAAAACGTCA              GGTGC CCCCAC GCACC               ATTCTGCTGCGGATC  50 217
IRT44_RS07920 NONE
IRT44_RS07925 NONE
IRT44_RS07930 NONE
IRT44_RS07935 NONE
IRT44_RS07940 1609432 .. 1609457 + -19.1  -3.25015   TTTGTCTAACGCTGA         GACCGCAGGTG CAAA CACCTGCGGTC          TTCATCATGCTTACA 100 479
IRT44_RS07955 1612881 .. 1612896 + -10.4  -5.12916   TTGTCTTTAGTCTGA              GTCCGG GAAT CCGGAC               TTTTCTTCTTTTCTG 100 466
IRT44_RS07960 NONE
        purS NONE
        purQ NONE
        purL NONE
        purF NONE
        purM NONE
        purN 1620131 .. 1620169 + -19.6  -5.99154   TGGAGAAATAACAGC   GGCCCTCTGCGACGGG TGTGATT CCCGTGGCGGAGGGCC   TTTTTTTGTTTCGTG 100 30
IRT44_RS08000 1621999 .. 1622042 +  -5.3  -5.40072   GACGTGTAATGCAAA CGAAGCGCAGTCTCG-CGTGC CTTG GCACGATTCGGCTGCG-TTCG TTTTTTTGGGAGGAA  91 40
        purH NONE
        purD 1625069 .. 1625101 +   -10  -4.57882   TGTATGGCAAAAAAA     GGGAGAT-CCGTC CGGTTATT GACGGTATCTCCC      TTTCTTCTTGTTCGC  90 60
IRT44_RS08025 1628154 .. 1628176 +  -9.9  -4.32857   GCCTCTTTCAACCCG          GGGCG-ACAC TCAG GTGTGCGCCC           TTTCTGTTTGAGGAG  87 523
IRT44_RS08030 NONE
IRT44_RS08035 NONE
IRT44_RS08040 NONE
IRT44_RS08045 1632159 .. 1632188 + -20.9  -5.24129   TGCATAGAAGTGAAG       CACCGATGGAGTC TAAT GACTCCATCGGTG        TTTTTTGTAACGAAA 100 34
IRT44_RS08050 1632962 .. 1632988 + -11.6  -3.35679   AGCATGGTATCAGGC         GGCCAGCCAG GTGAATA CTGGTTGGCC         TTGTCGGTGGAGGAG  77 39
IRT44_RS08055 NONE
IRT44_RS08060 1634129 .. 1634162 +  -6.6  -4.61482   AAGAGCGTGTAAAAA     AAGGCGAGCTTGCG CATCAA TGCAGGCTCGCCAG      TTGTTTTTTGCCGGC  79 49
IRT44_RS08080 1638034 .. 1638046 +  -3.4  -2.73364   AGGAAAGTAGGTGTC                CCTT TGAGC AAGG                TAATTGACGTCGAAC  41 31
IRT44_RS08085 NONE
IRT44_RS08090 NONE
IRT44_RS08095 NONE
IRT44_RS08100 1642240 .. 1642258 +  -7.3  -4.45544   CATCACCTGTTCGCG             CGTCGGC TTTTT GCCGCCG             TTTTCCTTGATCGCC  76 342
IRT44_RS08120 NONE
IRT44_RS08125 NONE
IRT44_RS08130 1647918 .. 1647939 + -13.1  -3.89215   AGCGGTAAGGGAAAA           GGAGACTCA TTGA TGAGTCTCC            TTTCAGTTTGTAGAC  87 33
        pcrA NONE
        ligA NONE
IRT44_RS08160 1656107 .. 1656117 +  -4.6  -3.36515   CAGGCGAGAAACAAG                 GGCG TTA TGCC                 TGTTTGCAAATACAA  52 46
IRT44_RS08165 1657274 .. 1657306 +   -12  -3.95435   TATGAAAATGAAAAA     GCCGGTTTTCCCGCG TATA CG-GGGATGACCGGC      TTCTGTTTTCGCAAG  86 83
        pruA 1659117 .. 1659139 + -16.3  -4.77036   CAACGAGACGACAAA           GGCTGCCCC CATAC GGGGCAGCC           TTTTTGCTGCTCCAG 100 42
         asd 1661227 .. 1661254 + -16.4  -4.49352   AGTGAATGCTAAACG        CAAGCCCGAGAG CACG CTCTCGGGTTTG         TTTGTCTTTTCATAT 100 47
        gatC 1661682 .. 1661698 +    -3  -3.34517   ATACAGGAGAAGGGA             G-GACAC CATT GTGTCGC              TGTTTGACAAGCGAT  47 49
        gatA NONE
        gatB 1664623 .. 1664654 +   -16  -5.06414   CAGACGGACAAAACA      GGGACACGCTTTCTC ATT GAGG-AGCGTGTCCC      TTTTTGTTGCGCGGG 100 45
IRT44_RS08205 1666327 .. 1666347 +    -9   -5.3689   AACACGTTGGATTAT            CCCTTGCG TAACT TGCAAGGG            TTTTCTTTTATTTGT 100 15
IRT44_RS08210 NONE
IRT44_RS08215 1668400 .. 1668411 +  -7.2   -3.1247   GATATTGACGCCGGG                CGGC GGAT GCCG                 TTCAATGTCGGCAGT  59 48
IRT44_RS08225 1670573 .. 1670591 +  -4.4  -4.70659   TGACGCGGTCAAAGG             CGGCGGGG AAC CCCTTCTG             TTTTTCAGTATGAAA  70 66
        rlmD 1672156 .. 1672166 +  -6.8  -3.89131   TGTGGATAAGCCTTT                 GCAG AAC CTGC                 TTTAATACTTGTTCA  67 119
IRT44_RS08265 NONE
IRT44_RS08270 1681653 .. 1681674 +  -6.6   -5.7946   TTATTAAAAAGCAAA           GCC-CTCCT TTTTT AGGAGAGGC           TTTTTTTGTTAGAGC 100 11
IRT44_RS08275 1682889 .. 1682907 +  -3.8  -2.57795   TGGGATGATGCCATC             TATGCAGT AAA GCTGCATC             TGGGTTCGTAATGAG  43 58
IRT44_RS08280 1683619 .. 1683637 +  -4.6  -2.98282   GAAAAGGGGATATTA             TCAGAAAA ACC TTTGCTGA             TGTATAATCATTGAT  47 159
IRT44_RS08285 1684398 .. 1684450 +  -9.2  -5.22039   TATCCGCACTTACGC GACAACTCGAAGCACGTGCAGGGGG ATTT CCCCGTGAGTGT-CTTCTGGTTGTC TTTTTTGGGTTTGAA 100 71
IRT44_RS08290 1685993 .. 1686024 +  -9.7  -5.73339   TGTCTTCAGTCTTAA      CCATTTTC-CTTTC TTGGT GAAAGTGAAAATGG      TTTTTTTGTGGTTGT 100 369
IRT44_RS08295 NONE
IRT44_RS08300 NONE
IRT44_RS08305 NONE
        fabG 1690493 .. 1690525 + -15.7  -4.54821   TGAAAAGCTATGAGG      GGATTGAACTTTGCC TCG GGCGAAGCTCAATCC      TTTTCTCGTTGGGCT 100 42
IRT44_RS08315 NONE
IRT44_RS08320 1692254 .. 1692264 +  -3.2  -3.57406   CTGCCAGTTGGTCGA                 CGTT TAT GACG                 TATTTCTGCTGAACA  49 100
IRT44_RS08325 1692769 .. 1692780 +    -3  -3.28712   ACGGAATAAGGTCAT                TCAA GGAA TTGA                 TTGTCGAAAAGACGA  46 58
IRT44_RS08330 1693527 .. 1693555 + -17.5  -3.15544   CTGCAAACAAACCAA        CCCCCGTGTGACA GAA TGTCGTACGGGGG        TTGGTGACGGTGGAG 100 97
IRT44_RS08335 1695011 .. 1695026 +  -2.5  -3.28791   GTAAGACTCAGATAA              TTCGC AGTAGG GCGAG               TTGTCGGAAAACAAT  44 107
IRT44_RS08340 1696269 .. 1696291 +  -6.2  -5.60993   GGTGTGATATGCAGG           TGAGGATCGC CCG GTGGTCCTCC           TTTTTTTCTCACAAC 100 68
IRT44_RS08345 NONE
IRT44_RS08350 NONE
IRT44_RS08355 NONE
IRT44_RS08360 NONE
IRT44_RS08365 NONE
        hutU 1702379 .. 1702408 + -18.7  -3.05384   AACGCGAAAAAAGCG       GCATCCCGAGGGA GTTT TTCCTCGGGATGC        TTCCATGGAGGAGAG 100 66
        hutI 1704101 .. 1704125 +  -8.6  -5.21709   TTGTCTTCAGTCTGA          GGCACGGA AACAGTTGC TCCGTGCC          TTTTTTGCTGTCCAG  93 411
IRT44_RS08380 1705483 .. 1705501 + -10.4  -3.28712   CGGCATCATCTATAA             TCATTCTC GGT GAGAATGA             TTATCACAAGAGGAG  73 42
IRT44_RS08385 NONE
IRT44_RS08390 1707570 .. 1707601 +  -4.4  -2.70932   GAAATAACGAGGCCA      TGCGGCGCGT GACGAGTGGAGA GTGCGCCGCA       TCATTGCAGCCCCGA  44 34
IRT44_RS08395 NONE
        dhbC NONE
IRT44_RS08405 NONE
IRT44_RS08410 NONE
IRT44_RS08415 NONE
IRT44_RS08420 1720207 .. 1720229 +  -9.9  -3.78026   TTATCTACACACTGA          GCCGG-TTGC CAAG GCAATCCGGC           TGTTTTGCATTTCCC  77 516
IRT44_RS08430 1722267 .. 1722305 + -18.4   -2.6062   CGCCCGGAAAACAAG  GAGGCTGACATC-TCCG GATGCA CGGAGGATGTCAGCCTC   ATATTCTCTCGTGGC 100 57
IRT44_RS08455 1728444 .. 1728466 + -12.7  -3.15999   TTAAAAAAACCAAAA           CCGGGCAGC AAAAC GCTGTCCGG           TTCAGTCTGTAAACA  79 37
IRT44_RS08465 1730022 .. 1730032 +  -4.6  -4.58303   AAGGCTGGATTGCTG                 GGGT CAG GCCC                 TTTTCTCCTGTTTCA  68 71
IRT44_RS08470 1730567 .. 1730593 +  -3.6  -3.92659   ATTGAATCGTAAGCG         GAGAGGGCAGGG GAA CTTCGTCCTTTC         TTTCGCTTTTGGAAA  57 57
IRT44_RS08475 NONE
IRT44_RS08480 NONE
IRT44_RS08485 1732748 .. 1732766 + -11.7  -5.06414   TTGTCTACACACTGA             GGAGGGG GGATG CCCCTCC             TTTTTCTTGCGCGGC 100 375
IRT44_RS08500 1735794 .. 1735818 +  -7.1  -4.72272   CGAACATGGCATCTG          CCCCTGACC CGCTGGT GGTTGGGGG          TTTTTGCTGCACAAA  79 87
        metA 1736886 .. 1736904 +  -8.1  -5.04249   GCCGGAAGACGCCAA             CCATCCG GACTG CGGGTGG             TTTCTTTTTTGGGGG  90 42
IRT44_RS08510 NONE
IRT44_RS08515 NONE
IRT44_RS08520 1739142 .. 1739160 +  -5.2  -2.75183   ATCCGCAGCAGAGAT             GGGGGTGA TAT TCACCGTC             TCGTTGCATAGACAT  48 65
IRT44_RS08525 1740054 .. 1740078 + -14.3  -3.41341   CTGTCTGCACGCTGA          GCCTCGCCC CTGACTT GGGCGAGGC          TGTTTGCGTGCAATT  88 41
IRT44_RS08540 1743354 .. 1743375 + -15.9  -3.91897   TTGTCTACACGCTGA           CAGCGCCGT TATT ACGGCGCTG            TTTCTGCCTGCAAGC 100 394
IRT44_RS08545 1744219 .. 1744233 +  -2.1  -3.16068   TCGGGCTGACCCAGT               GGTTT GCCTA AAGCC               GTTTTGCGTTAGCGG  42 15
        motA NONE
        motB 1745984 .. 1746009 +  -9.8  -5.02476   ATAAGCAAAGGCAAA         GGGATAG-CGC GACAA GCGTCTATCCC         TTTTTTGACACCTCT 100 37
IRT44_RS08565 1747130 .. 1747163 +  -9.6  -5.31275   TGATAGACACGCAGG     AGAAAGGACAGCGT CAAAAC ACGCTGTCCTGTCC      TTTTTTGTGATGAGC 100 38
IRT44_RS08570 1747557 .. 1747569 +  -4.9  -2.56596   CTTTCTGAAAAGTGG                TAGAA GAA TTCTA                TAAATTGCTACAAAA  44 23
        istA NONE
        istB 1750998 .. 1751015 +  -3.5  -3.55122   CCACTGGTCCGATGG             CTGT-AGA ATA TCTGACAG             TTCCTTTCCCTCGTA  49 344
        atoS NONE
IRT44_RS08610 1755959 .. 1755974 +  -5.4  -3.28924   GCAAAAAGTAGTCAA              TGATGC GCAA GCATCG               TTATGAAAGCGCATA  53 109
IRT44_RS08615 1757472 .. 1757500 + -16.8  -3.70417   TGTCCCCATGAAAAA        GCCGGCATCTGT CACAT GCAGATGCCGGC        TTTCGGTCGTATGCT 100 84
IRT44_RS08645 NONE
IRT44_RS08650 NONE
IRT44_RS08655 1762045 .. 1762073 + -11.7  -5.46657   GCCGTTGGGCAGCAA        GCTGACGCCTGTA CGC TGCAGGCGTTTGC        TTTTTTGTTGAGCTG 100 101
IRT44_RS08675 NONE
IRT44_RS08680 1767493 .. 1767521 + -17.5  -4.72386   TGCGGATGTGCATCG        GCCCACCTTTCCT GCC GGGGAAGGTGGGC        TTTTTGCATGCTTTC 100 230
        thiO NONE
IRT44_RS08690 1769815 .. 1769844 +   -10  -4.87318   TAACACCAGCACGAA       GCCT-CTGCCGGG CTGTA TCCGGCGGGAGGC       TTTTTCCATTTTCAC 100 44
IRT44_RS08695 1770691 .. 1770710 + -12.1  -5.03314   GTCTTCAGTCTGTAA            CGGGCCC AGAATA GGGCCCG             TTTTTTGCGAATAAC 100 385
IRT44_RS08700 1771314 .. 1771332 +  -6.6  -3.28261   GGTAGCCCGCGTCGG             CATCCCGG CCA CCGGAGTG             TTCCTGTAACATTGT  58 36
IRT44_RS08705 NONE
IRT44_RS08710 1772949 .. 1772976 + -15.6  -5.00642   AGAACCATGACGGAA        GGCTGTCCGACA AGAC TGACGGACAGCC         TTTTTATCTGAGTTC 100 31
IRT44_RS08740 NONE
IRT44_RS08745 1777793 .. 1777810 + -14.1  -4.11346   ACATAAAGTGAAAGA             GCCGGCG GCAG CGCCGGC              TTATTGTTTGGCTAT 100 30
IRT44_RS08755 1779739 .. 1779768 +  -9.9  -2.87344   TGATTCGCAAGTAAA       AAGACGGGTCCCT AAAC AGGGGCCCGTCAG        TGTGTAGACGAAGTC  67 27
IRT44_RS08760 1780709 .. 1780749 +  -9.8  -5.49729   CGTGATAAAAAAATG TAGCTCTCCGACTTGGCCC GTCT GGGATAAGA-GGAGAGCTA  TTTTTTTGACTGCTT 100 148
IRT44_RS08780 NONE
IRT44_RS08785 1786805 .. 1786820 +  -4.7  -4.09243   CCATGCCTGGTGGCA              GAAGG TGTTCC CCTTC               TTTTCGGAAGGTGTG  61 87
IRT44_RS08790 1788233 .. 1788252 +  -2.9   -4.9792   ACGATCGCGTGAGTC            TTT-CCGG AAAAG CCGGCAAA            TTTTTGTGTGAAGTG  73 281
IRT44_RS08800 1788913 .. 1788933 +  -6.2  -5.84432   ATAGCGGAATGCAAA            TTGGTTCT GACAG GGAACCAA            TTTTTTTCTGTTCTG 100 37
IRT44_RS08815 1791130 .. 1791153 +  -9.6  -4.85782   TTGTCTTCAGTCTGA          TGCCCAATCG TTTA TGATTGGGCG           TTTCTTTTTGCAGCA 100 409
IRT44_RS08825 1794088 .. 1794123 + -16.9  -5.00616   AAGAAGCCGCCAAAC    GATCCTCGCCTGCCC CGCGTT GGGCGGGCGAGGATG     TTTTTTCCCACAGGC 100 39
IRT44_RS08830 1795198 .. 1795213 + -10.4  -5.73339   AAGATCAGAACGCAT              GACGCC TCTG GGCGTC               TTTTTTTGTCATTAT 100 24
        brnQ 1796690 .. 1796712 + -15.6  -3.89607   CAGGAAACAACAAGC           GGCACACCCT AAT GGGGTGTGCC           TTCGTTTTTCTCGTA 100 14
IRT44_RS08845 1798494 .. 1798545 +  -3.2  -5.40072   TCAGCCTGACAACAA TGGCCTCTCCATTTTACCCGTTTT TCTTCT ACAATGGGTAAGATGG-G-GGCTG TTTTTTTGCGCACAA  83 53
IRT44_RS08850 NONE
        speE 1800245 .. 1800265 + -15.5  -3.29096   ATAAAGCAAACGTTA            GGAGAGGGA TAA TCCCTCTCC            TTCGTCATTCCTCGA  95 14
IRT44_RS08870 NONE
IRT44_RS08875 1804630 .. 1804656 + -10.1  -4.62336   GCAAAAAGCGAAAAA         CGTGCTTCCTC TGCAC GAGGCGGCACG         TTTTTCCAGTCGAAT 100 126
IRT44_RS08885 NONE
IRT44_RS08890 1806926 .. 1806967 + -11.7  -4.58283   CGCCGTTCCCGTCAA AAAACAAGGATCGTTGCGGG ATG TCCGCA-CGATCCTTGTTGA TTTTTCCGCAAGTTG 100 53
IRT44_RS08900 NONE
IRT44_RS08905 1810298 .. 1810311 +  -5.9  -5.50499   TGAGACGCAAAAAAG               GGGCT ATTA GGCCC                TTTTTTTGCGTCTGG  95 57
IRT44_RS08925 1813479 .. 1813493 +  -8.5  -3.27498   ACGCGACGCGGGCAG               GGGGC AAACA GCCCC               TTGGTATCAGGTGTG  64 371
IRT44_RS08940 1815516 .. 1815526 +  -8.2  -5.63517   AACCAAGTGGGGACG                 GCGG ACC CCGC                 TTTTTTATTTGGCGG 100 53
        ilvA NONE
IRT44_RS08950 1817667 .. 1817682 +  -7.5  -5.74122   AGTGCAGGGAAGACA              GCCGC AGCCGG GCGGC               TTTTTTTGTCTGCTC 100 113
IRT44_RS08960 1819733 .. 1819749 +  -2.1  -2.91383   CGATCGGGAATGGAA              AGCGCGA GCC TCCCGCC              TGTCTGCCTGACGAT  41 47
IRT44_RS08965 1820447 .. 1820474 + -10.6  -5.42259   TTCGTAAACAGAAGA        GAGACCGCCTGA TAAT TCAGGCGGTTTG         TTTTTTTGACGCTGC 100 34
IRT44_RS08970 1822197 .. 1822207 +  -4.6   -3.6849   TGGGCAGACCCAGGC                 CGGT GCC GCCG                 TTGTTCCGGTTGCGT  56 307
IRT44_RS08990 NONE
IRT44_RS08995 1826700 .. 1826720 + -12.6  -4.13767   AGAATTGAACCTAAG            GCAGCCTG GGAAA CAGGCTGC            TTTTCCCCTAGAGGA 100 67
IRT44_RS09000 NONE
        liaF NONE
IRT44_RS09010 NONE
IRT44_RS09015 1830103 .. 1830135 +  -2.8  -4.58563   ATAATGAACAGAAAA     GCATCCCGATTCA CCTAAGAA TGG-TTGGGATGC      TTATTTTTGTAATTG  64 134
IRT44_RS09025 1832192 .. 1832219 +  -2.7  -3.64236   TACCGGTGCACCTGT       GGTT-CGCGCCGG AATG CCG-CGGGTAACC        TTTCAACCTTTCGAT  49 41
IRT44_RS09030 NONE
IRT44_RS09035 1832755 .. 1832774 +  -9.3   -5.1244   ATGAAAAATGAAAAA            GCTTGGC CGATGC GCCAAGC             TTTTTGTATTGGTCC 100 30
IRT44_RS09045 1834424 .. 1834449 + -12.6  -5.15969   TCCGTGAATGAATGA         GGCATGCCGT TTTTGT GCGGCATGCC          TTTTTTACGTTGGCG 100 54
IRT44_RS09050 1835489 .. 1835512 + -13.8  -4.65916   AAGGTATGCAAAAAA          GCGCCTGCCC CTCA GGGCACGCGC           TTTTATTACGGTCAA 100 61
IRT44_RS09060 NONE
        mutY 1838108 .. 1838126 +   -16  -5.03314   TGGAAACGATCAAAA             GCGACCGG TGA CCGGTCGC             TTTTTTGCAGGTGAA 100 15
        fabL 1840299 .. 1840330 +  -2.2  -4.20025   CGCTGCTGACCTAAG      TCCGTTTGGGCCG TTTGGGC CGGGCCGA-CGGG      TTTGTATTCCCAATT  57 27
IRT44_RS09090 1840820 .. 1840831 +    -3  -2.56661   CAAAAATATGTTACA                CTTT CCAA AAAG                 CTCTCTTCTTAAGTT  40 2
IRT44_RS09095 1841434 .. 1841461 + -13.5  -4.18044   GATGACGAGGTATGA        TCCCTTTCCCG AACGGC CGGGAGAGGGA         TTTCCTTGTTTGTCG 100 26
IRT44_RS09100 1843377 .. 1843389 +  -4.8  -2.83403   GGCCGCGAGGAGACG                GCGA GGCAG TCGC                GTTTCCTCGCACCGG  45 70
IRT44_RS09105 1844845 .. 1844858 +  -8.1  -3.14132   GCCGATTCGGCCAAC               GGCGT GGAG ACGCC                TTCCTCGCGGGCGAG  57 240
IRT44_RS09135 NONE
IRT44_RS09140 NONE
IRT44_RS09145 1855827 .. 1855854 + -11.2  -4.63218   GTGTGCGCAAATACA        GAGGAGCGGGGT CGTG ACCCCGCTCCAG         TTTTGTTGCCAAAGC 100 9
IRT44_RS09155 NONE
IRT44_RS09160 NONE
IRT44_RS09165 1859539 .. 1859564 + -10.5  -5.33405   GTCCGCGTTCGCAAG         CCCTGAGGA GAAGTCAG TCCTCAGGG          TTTTTGTTTGGTGAA 100 456
IRT44_RS09170 1860505 .. 1860529 +   -15   -4.8743   GTACCGCGGGTAATT          CCCCCGTCCC TAATT GGGATGGGGG          TTTATTTATTTTAGA 100 260
        proS 1862130 .. 1862149 +  -9.2  -4.99035   AACAGGTAATCCGGT            TCGGGCTG GAAG CAGCCCGC             TTTTTGTGTGACTGG 100 132
         bcp NONE
IRT44_RS09195 NONE
IRT44_RS09200 NONE
IRT44_RS09205 1866740 .. 1866778 +  -8.2  -3.05498   TCTGTCGCCGGATCA  GTC-G-CCGGCCGCTC AGTGAACAG GAGCGGCCGGTCCGGC  TATATGTCTGAACTG  62 125
IRT44_RS09210 1867920 .. 1867932 +  -9.1  -3.05343   TACCGGGCAATTCCT                TCCCG AAA CGGGA                TCTTGGGCGTATCAA  65 91
         nth 1869740 .. 1869760 + -12.7  -3.76952   AATTCTAATCAATCA            CAAACAAGC AAC GCTTGTTTG            TTTGGCTTGCATAAG  85 124
        perR 1870254 .. 1870295 +   -11   -5.5353   TGCGCCCCGGAACAA CACCTTCTGCTTCAACCGG CTGTT CCTGTTGGAG-AGAGGGTG TTTTTTGTTGGTGTA 100 51
IRT44_RS09230 1872271 .. 1872300 +  -9.4  -5.64421   TGACCAAGGAAAAAA      TCCACCTTGC-GCC AATC GGCTGCA-GGTGGA       TTTTTTGTTTCCCGT 100 84
IRT44_RS09240 NONE
IRT44_RS09245 1875563 .. 1875576 +  -6.7  -2.72471   CAAAAGTAAAGATTG               GCACA TTCA TGTGC                GTTGTCTGGTGACGA  53 107
         rrf 1875695 .. 1875719 +  -7.8  -3.45366   AGTAGGACGTTGCCA         G-GCGGCTGCC TGAC GGCAGCAGCAC          TTCGTTCCTTGAAAA  62 23
IRT44_RS09255 1878733 .. 1878755 +  -2.7  -2.51133   CCATGCATATCCAGT           TTTGAAGGC GCGAA GTCTTCAAC           GTTCCTCGGTAGCTC  40 58
IRT44_RS09260 NONE
IRT44_RS09265 NONE
IRT44_RS09270 NONE
IRT44_RS09275 NONE
IRT44_RS09280 NONE
IRT44_RS09285 NONE
IRT44_RS09290 NONE
IRT44_RS09295 NONE
IRT44_RS09300 NONE
IRT44_RS09305 NONE
IRT44_RS09310 NONE
IRT44_RS09315 NONE
IRT44_RS09320 1880015 .. 1880045 + -17.8  -5.08824   TTACATAACGAAACA       GCTCTTAAGATGCG AAC CGTATCTTAAGAGC       TTTTTTGCGTGCAGC 100 41
         ric NONE
IRT44_RS09330 NONE
IRT44_RS09335 1882761 .. 1882780 +  -7.8  -3.19656   ACCAGAATGCGTACG            CCGTCTTC CGGA GAGGGCGG             TTCGTAAATGCGTTT  59 422
IRT44_RS09350 1884380 .. 1884407 + -14.2  -4.98758   GTAGCTGGGGAAAAA        GCGGACTTCTTC GTAC GGAGGAGTCCGC         TTTTTGTCGATTTTT 100 103
IRT44_RS09355 NONE
        narH NONE
        narJ NONE
        narI NONE
IRT44_RS09375 1892611 .. 1892636 + -14.8   -4.4891   CGTCTTCAGTCTGAA         GCCCCGAAAC CATCGC GTTTCGGGGC          TTTTCTGGTCCTGGG 100 80
IRT44_RS09385 NONE
IRT44_RS09390 1897093 .. 1897126 + -11.8  -3.34962   ATATAGCGAAACCGA     CTGGACGCGGCGG AATGGATAG CCGCCG-GTCCAG     TTCTGCGGTATGACA  80 35
IRT44_RS09395 1898453 .. 1898483 + -11.9  -4.85599   ATGGACGATCAAAAA      CGGCG-GCCATCAC ATCC GTGATGACTCGCCG       TTTTTGTGCACTCAG 100 46
IRT44_RS09400 1900292 .. 1900302 +  -6.8  -5.28942   ACGGCCGCTCTGCGT                 GACG GAC CGTC                 TTTTTGTTTGGCATG 100 24
        rnhA NONE
        queG NONE
IRT44_RS09420 1903784 .. 1903805 + -13.7   -5.1861   TTGTCTTCAGTCTGA           GCTGTCCGG TAAT CCGGGCAGC            TTTTTTCATGCTCCC 100 364
IRT44_RS09425 1904909 .. 1904937 +  -8.2  -3.32993   GCATGTGAGTCAACA       GAGGCGG--CCTCT ATG GGAGGAACCGCCTC       TTGCTGTCTGGATGC  64 33
        trmL NONE
IRT44_RS09435 1906419 .. 1906445 +   -13  -5.75342   CACACGAATACAGCC         GACCGTCACTGT GAT GCAGCGACGGTC         TTTTTTTTGCCAAAA 100 51
IRT44_RS09440 1908885 .. 1908904 +   -10  -2.52464   CTGAACAGATAACGT            GCTCGCGGG GCA CCCG-GAGC            TGGCTTGCCAGGGAA  64 29
        yhbH 1910135 .. 1910153 +   -16  -5.15381   TGAGTGCAGAGGAAA             CCGGACGG GTA CCGTCCGG             TTTTTTGCGTCTGTT 100 38
IRT44_RS09455 NONE
IRT44_RS09460 NONE
IRT44_RS09465 NONE
IRT44_RS09470 NONE
        manA 1917400 .. 1917416 +    -8  -5.31158   CGCGAGCGATGCAAA              GACCCT GGCAA AGGGTC              TTTTTCATTTTTTTC 100 54
IRT44_RS09480 1918035 .. 1918074 + -14.2  -3.05066   CTGGCGGAGGCCAGC  TGAAAACGGGCGGCCTGT CTTT GCGGGCCGCCCGTGATCG   TGTTCAGAAATTGTT  86 45
IRT44_RS09485 NONE
IRT44_RS09490 1920230 .. 1920245 +    -4  -3.08371   AACGAACGTAATTGT              CAATTG TTGT CGATTG               TCTATTGGAGGTGTC  46 469
IRT44_RS09495 NONE
IRT44_RS09500 NONE
IRT44_RS09505 NONE
        pelF NONE
        pelG NONE
IRT44_RS09520 NONE
IRT44_RS09525 NONE
IRT44_RS09530 1931561 .. 1931615 +  -8.8  -5.46657   GGTACCGCGATTCCG TCGCCTCAGCAATCGAATCTTTGGGAC GAAT GTTCCGG-G-TTCGGTTGC-GGGGCGA TTTTTTGTTGGAGTA 100 397
IRT44_RS09535 NONE
IRT44_RS09540 1933360 .. 1933378 + -17.4   -3.8377   TCGTAAAAAGGGAAA             GGCCGGGG GTT CCCCGGCC             TTTGCTATACCGATT 100 35
IRT44_RS09550 NONE
IRT44_RS09555 NONE
IRT44_RS09560 NONE
IRT44_RS09565 NONE
IRT44_RS09570 1941071 .. 1941124 + -11.1  -5.14563   AAGAGAACAGGAGAA CCCCCTTGAAAGG-ACAGCTTGTC TGATGAC GGCAGGCTGCACTTTTCACGGGGG TTTTTTCATGAAACA 100 95
IRT44_RS09575 1942949 .. 1942973 + -11.5  -3.47184   AGATGAAAGTGTAAA          GCCGTTGAC AAAGCAG GTCAACGGC          TATTTGACTTCAGTT  77 77
IRT44_RS09585 1946078 .. 1946111 +  -8.9  -4.10552   GGGAAATAAAAAAGA     GGGAGGAAAATAGCT TGGC AGTTCATTTCCTCCC      TTTACTTTAGTAAAA  77 49
IRT44_RS09590 1946540 .. 1946557 +  -4.1  -4.30793   TCGCAATATATACCC             CATGCAG AGTG CTGGATG              TTATTTGTTATGTCG  64 120
IRT44_RS09610 NONE
IRT44_RS09615 1949928 .. 1949951 + -10.3   -3.4174   GGCAGAAAAATAAAA          GGGGAAGCT GAAAGA GGCTTCCCC           TTGGCTTGTTTTTAT  75 15
IRT44_RS09635 1954746 .. 1954760 +  -2.8  -4.68645   CAAGGTTTTTGATTT               TCCAGA AAA TCTGTA               TTTTACTTTTCCGTC  69 518
IRT44_RS09670 NONE
IRT44_RS09675 1960977 .. 1961001 +  -9.3  -4.12532   GTAAGGAATATGCAA          GGCCGGGAA CTGATGC TTCTCGGCC          TTTCTCTATACGAAA  79 164
IRT44_RS09685 NONE
IRT44_RS09690 1962585 .. 1962612 + -11.4  -4.88067   CAACAGCCGCAAAAA        GGGCGTT-GTGTT TCA AGCACGAACGCCC        TTTTTGTGCATGGGT 100 41
IRT44_RS09700 1963919 .. 1963937 +  -7.3  -2.71497   CAAGCAATAGGAAAA             ACCCCGG CAAAA CCGGGGG             GTTCCTTTACGGTGC  56 65
        ltrA 1966138 .. 1966172 + -10.6  -2.79915   CTTAGCAGCGTCTGC     TCCGGCGTGCACAGCG CGG CATTGTGCACGCCGCC     TGTGCTGCGGTGGAT  63 395
IRT44_RS09715 NONE
IRT44_RS09720 1968803 .. 1968861 +  -4.9  -4.93296   AGCGCCCCTGCCTGA GACAACCAC-CGTGGA-CATTCTCTGTC CGATGA GA-AGGGACTGGTTCATGGGTGGTTGTC TTTTTGTCGTCCTGC  76 118
IRT44_RS09725 NONE
        mobB 1970861 .. 1970882 + -10.2  -5.26875   TTGTCTGCATGCTGA           GCAACCTG ACATTG CAGGTTGC            TTTTTTCGTTGAAAG 100 173
IRT44_RS09735 1972943 .. 1972973 + -10.3  -4.82901   GCGGCGTGAGGGTAA       CCCTTGCCGGTGT CTCAA GCTCCGGCGGGGG       TTTTTATGGGACGAA 100 137
IRT44_RS09740 1974016 .. 1974046 +  -9.1   -5.7946   GGACAAGCGTAAAAA       GCAGTCGGGAA CAATTGGGT TTTCCGACTGC       TTTTTTTGTTGGCGG 100 83
IRT44_RS09745 1974527 .. 1974541 + -11.4  -5.53991   TTTTCGCCCAAAAAA               CCGCTG ATT CAGCGG               TTTTTTTCGTGCATC 100 19
IRT44_RS09765 1976226 .. 1976256 + -13.4  -2.71364   CGGTGCAGACAGCGG       CAAAGACGTCCC GGCAAAA GGGGCGTCTTTG       TCATTGGCCAGCTCA  79 50
IRT44_RS09770 1977858 .. 1977903 +   -17  -3.56594   CCGCGGCTTACAAAA GCAATGCCCCAAAC-CCCCTG ATCAG CAGGGAAGTTTGGGGCTTTGC TTTGCCACAATTTCC 100 94
IRT44_RS09785 1980175 .. 1980202 +   -15  -4.83615   AAAGCACATAAAAAA        GAGAAGGCATTC TCAA GGATGCCTTCTC         TTTTTATGCGCGGTG 100 94
IRT44_RS09795 NONE
IRT44_RS09800 1983154 .. 1983184 + -13.4   -5.7946   AGAATTTGGGTGAAA       GCCCTCTCAAGA CGAGCGA TCTTGAGGGGGC       TTTTTTTCTTGAAAA 100 86
        coxB NONE
IRT44_RS09810 NONE
        cyoC NONE
        cyoD 1987407 .. 1987432 + -14.1   -5.7946   CGAAACGAGGCGAAA         CCTCTTGGGCT ATCA AGCTCAAGAGG          TTTTTTTGTTGAGAC 100 56
IRT44_RS09825 1988127 .. 1988156 +  -7.2  -5.04249   TTGAAATTTCCATAT       CCTTCTCTCC GTATAGACCA GGAGGGAAGG        TTTATTTTTTCCGGG  87 47
IRT44_RS09830 1989775 .. 1989820 + -11.3  -5.28176   AACTAAAAGGCGAAC ACAGCCCT-CGTGCA-CCGGA ATGATC TCCGGCTGCATGCAGGGCTGC TTTTTTGTGCGTGGA 100 40
IRT44_RS09835 1990855 .. 1990891 + -13.1  -5.62045   TGGACGTCGTGTCGA    CGCTTTGCTTCCTTTGG TTT TCGAGGAAAGCAAAGCG    TTTTTTATTGTATCT 100 384
        cobO 1991549 .. 1991589 +  -6.7  -2.70932   TGGGGGTGGAGTATT  GATGACCGCCGTGTTGGAG GTG TTCGGTCACGGCGGCGATC  TGGTTACGGCGGCGG  52 24
        cobD NONE
IRT44_RS09850 NONE
        cobS NONE
IRT44_RS09860 1994574 .. 1994588 +  -9.2  -2.71712   GCAGCTTGTGAGCCC               TGCCGC AGA GCGGCG               ATTTGCGGGAAAAAA  62 30
        cbiB 1995633 .. 1995649 +  -9.3  -3.28712   CGATTTCGGTGAGCA              CGGGCCC ATA GGGACCG              TTATGGAAAGGAGGC  67 15
        cobJ NONE
IRT44_RS09875 NONE
        cobK 1999170 .. 1999191 + -13.7  -3.53012   GGGATAAACAGCCCC           G-GGCCCCGG GAT CCGGGGCCGC           TTTCGCGGGACGGGC  86 34
IRT44_RS09885 NONE
IRT44_RS09890 NONE
        cbiE NONE
        cobI NONE
        cobM NONE
IRT44_RS09910 NONE
IRT44_RS09915 NONE
IRT44_RS09920 NONE
        cobT NONE
        cobA NONE
IRT44_RS09935 2010228 .. 2010261 +   -14  -4.77757   TGAATGAAATCTCGT     GAACCGGAA-GCCCG GACAA CGGGTGTTCCGGTTC     TTTTGCTTTTTCCGG 100 38
IRT44_RS09940 2012184 .. 2012218 +  -7.5  -4.32046   CTTTGATTCGTCTTA    CAATGACTA-TTGAAA ACGA TTTCAAATAGTTATTG     TTTCATTTTTAAACA  76 64
IRT44_RS09945 2013239 .. 2013275 +  -8.6  -3.09516   AGCTATCGAGAAGAA   G-GGAGGGTCCCGCGGC AGGC GGCTCGGGACGCTCCGC    TTCGATCGTCAGACG  62 43
IRT44_RS09950 2014996 .. 2015008 +  -4.7  -3.78329   GGTATCCGCCCAGGC                CGGGG ACG CCGCG                TTTCGCTTCCTGGAA  56 302
IRT44_RS09960 2017376 .. 2017391 +  -5.4  -5.14563   CTGGTGGTCCTGGCT              TGGCTA CATG TAGCCG               TTTTTTAATGAAAGC  83 13
IRT44_RS09965 2018091 .. 2018109 +  -3.8   -3.1647   GGGGAAAGCAGGTCG             TCCGCGAA AAT TTTTCGGA             ATTTTCAGTATTAAC  46 86
IRT44_RS09970 2019239 .. 2019249 +  -8.2  -2.52464   GGGGCACCGTTTCCG                 CCGG GGA CCGG                 TGCCTTGGGGGAACC  58 70
IRT44_RS09975 NONE
IRT44_RS09980 NONE
IRT44_RS09985 2021820 .. 2021848 +  -4.7  -3.78189   ACCGAGCGATACATG       TGTGG-GGATTG TTTTTT CAATCCTTCACA        ATTTTTCTTTGCATT  56 40
IRT44_RS09990 NONE
IRT44_RS09995 NONE
IRT44_RS10000 NONE
IRT44_RS10005 NONE
        sdhA NONE
        sdhB NONE
IRT44_RS10020 2029423 .. 2029438 +  -3.2  -2.62184   AACTGCCACGCCAGC              CGGC ACAAGGAA GCCG               TACTGTGAAACGGAG  40 2
IRT44_RS10025 NONE
IRT44_RS10030 2031062 .. 2031097 +    -9  -5.15634   ACGGAGGGATAAAAG    CCCGGGAGATATCGTTG TGC TGGCGATACC-CCCGGG    TTTTTTGCTGCGCTG 100 157
IRT44_RS10035 NONE
IRT44_RS10040 2031854 .. 2031875 +  -7.2   -2.6063   GGCGCCGGTGATAAT           GGCGTCCG ACACAC CGGGTGCC            TGCATTATGGCTGCC  55 72
IRT44_RS10045 2033368 .. 2033402 + -15.9  -2.71144   AACCGTTTGTCTTCA    GT-CTGAAACCTCCCG AAAA CGGGAGGTTTCAGTGC     TGATTGAACGCAGTG  86 355
IRT44_RS10060 2036781 .. 2036810 +  -3.5  -2.60992   AGTATGTCGAGGGCT       GACATGGCTGCGGC GCC GTC-CAGACATGAC       GTCTTTCAGGCAATT  43 24
IRT44_RS10065 2037215 .. 2037252 + -14.9  -5.24129   AAGAGAGTGCATGAA   GACAGTCCAAGACGGTG CTTT CCCCGTTTTGGCCTGTC    TTTTTTGTCGGGGAA 100 76
IRT44_RS10075 NONE
IRT44_RS10080 2040726 .. 2040736 +  -3.2  -4.08767   AACCGGTACGTGCTG                 GTGT GAC GCAC                 TTTTCAAAAAATGGC  56 20
IRT44_RS10085 2041760 .. 2041773 +  -2.3  -3.25823   CCAATCAGGCGTACT               TGCGG AAGG CCGGA                TTGCTGTCAGGGACG  44 46
IRT44_RS10090 2042382 .. 2042415 +  -8.2  -5.40072   GGCGGCCGTGAAAAA    TCCCCCC-TCGGCTCT GATA AG-GCCAAAGGGGGGA     TTTTTTTCGCCAAAC 100 30
        coaA 2043513 .. 2043523 +  -4.6  -2.79915   GGTCCAGAGCGTCAA                 GCTG CGC CGGC                 TGTAATCCGGTGAAT  45 10
IRT44_RS10100 2044197 .. 2044231 + -18.6  -4.85894   GCCGGCGAAACCATG     CAAACAGGCCCGAGGT GCT ACCTCGGGCCTGGCTG     TTTTCTATTTCGTTT 100 146
IRT44_RS10110 2046282 .. 2046313 +  -4.6    -3.727   ACTTTTTGAAATAAA      TTTTTTTCTCATGT ATTA ACAAAAGAAAAAAA       TTTCGATATAATCAC  56 95
        gntK NONE
IRT44_RS10120 2049316 .. 2049340 + -15.8  -6.00086   GGAAGCACCGTGCGC          CATCCCCCAC TGCGC GTGGGGGATG          TTTTTTTTGTGGTCT 100 69
IRT44_RS10130 2051812 .. 2051827 +    -9   -3.6959   CGTGACAACCTGCTT              TTGCCG TGTT CGGCAA               TTTCCATGCTCCTCT  73 142
IRT44_RS10135 2052458 .. 2052476 +  -8.1  -5.63103   AAATAGCAAGCAAAA            CCGC-CCG AAAA CGGAGCGG             TTTTTTTGCTTCCGG 100 97
IRT44_RS10140 NONE
IRT44_RS10145 2054224 .. 2054257 + -18.9  -3.06696   TCGGATGCCAGAAAC     GTCACCCCCACCGGG AAGC TCCGGTGTGGGTGAC      TGTGTTAGCGGACAG 100 181
IRT44_RS10160 2057965 .. 2057979 +  -5.6   -2.6472   AACACAAATAAGTCC               CCAGGC GCT GGCTGG               TACTATCCCATCTTC  47 30
IRT44_RS10165 2059526 .. 2059542 +  -5.2  -3.10464   GAGAGGTAAGGGTCC              CATGAA GGTGA TTCATG              TATTGGCGTTGCTGC  51 165
IRT44_RS10170 NONE
IRT44_RS10175 2061186 .. 2061202 +  -4.3  -2.77236   TCGGCGACAAAAACG              CGCATGC CGC GTAAGCG              ATTTGACATGGCTTT  45 12
IRT44_RS10180 2062042 .. 2062073 +  -7.3  -5.72622   AAACAGGCAGACACA      GCCGTTCCTCCC TTTCAAACC GGGAGG-GCGGC      TTTTTTGTTTGTACC 100 96
IRT44_RS10185 NONE
IRT44_RS10190 2063344 .. 2063379 + -16.2  -4.67353   GTGGCACATACGAAA    CACAAGCCGTGCTCCC AATG GGGAACACGGCTTGTA     TTTTTGCGTCCGTGC 100 93
IRT44_RS10200 2066475 .. 2066506 +   -11  -5.75538   CCGATTTCATTTGTA      ACA-GGTTGTCGAGA ATT TCTCGACAACCATGA      TTTTTGTTTTTTAGC 100 134
        istA NONE
        istB 2069143 .. 2069165 +  -4.2  -3.58565   AGTGTTGCCCCTTTC          CAACGGACA TTTTTT TG-CCGTTG           TTGTAATATTGTTTA  54 389
IRT44_RS10215 NONE
IRT44_RS10220 NONE
IRT44_RS10225 NONE
IRT44_RS10230 NONE
IRT44_RS10235 NONE
IRT44_RS10240 2075507 .. 2075517 +  -6.8   -4.4078   CCGCCCTGGAAGCAG                 GAGG GCG CCTC                 TTTTACTTCGGCGCC  74 196
IRT44_RS10250 NONE
IRT44_RS10255 2078184 .. 2078194 +  -3.2  -3.14132   ATTCAACCGTTGATA                 CGTG CAG CATG                 TTGGTGAAAAACGCG  43 116
IRT44_RS10265 2081256 .. 2081273 +  -5.5   -4.0896   CCCGCAGTCGGGGGA             CG-GGTGC TGA GCGCCGCG             TTTTGGCGGGAGTTT  63 501
IRT44_RS10275 2083345 .. 2083390 +    -4  -3.14132   GAATGGGGCTTGGAC CTGGATGAG-C-GGTCCACCGT CCTG ACGGCAGACCCGGCTCATCCGA TTGGTAACGGAAAAA  46 146
IRT44_RS10280 NONE
IRT44_RS10285 2085715 .. 2085725 +  -5.4  -2.75481   GGAGTGAAAGGAGGC                 GTTC CAT GAAC                 TACTTCCGATTGAAA  48 52
IRT44_RS10290 NONE
IRT44_RS10295 NONE
IRT44_RS10300 NONE
IRT44_RS10305 NONE
IRT44_RS10310 2092427 .. 2092458 + -18.1  -2.52795   ATAGGAGAGAAAAAA      CACAAGCCCGGGC GGGACA GCTCGGGCTTGTG       TGCGTTGGGGAGATT 100 45
IRT44_RS10325 NONE
IRT44_RS10330 NONE
IRT44_RS10335 NONE
IRT44_RS10340 2095773 .. 2095800 + -14.2   -4.8048   ATCAACACGAAAAAA        CGTGACCG-CCCG TTT TGGGACGGTCACG        TTTTTCATGTAAGCC 100 72
IRT44_RS10370 2103382 .. 2103401 +  -7.9  -6.06723   ATATACTTTCTGCCG            GAGTAGC CGCAAA GCTACTC             TTTTTTTTTACCCGG 100 155
IRT44_RS10375 2104890 .. 2104920 + -11.9   -4.7629   ATTACACACAAAAAA      GGTCGTCCGGACGGC AGT GCCG-C-GGACGGCC      TTTTTGGCTTGCTGA 100 64
IRT44_RS10380 2106062 .. 2106072 +  -6.8  -5.15969   GGCTCGGCCCCTGAC                 GGCT ACG AGCC                 TTTTTTCAGTTCCGC  91 207
IRT44_RS10390 2106715 .. 2106740 + -12.6  -3.66148   CGTCTATTGTGCGAT         GACCGGAGCG CGGCAA CGCTTCGGTC          TCTTTCATTTGATTC  85 108
IRT44_RS10395 2110327 .. 2110349 +    -7  -4.66264   ATTGCCAGTAAACTG           GGGAGGAT GAACCAA GTCCTCCC           TTTTTCGCCGTTTTC  79 16
IRT44_RS10400 2111769 .. 2111798 +  -9.9  -2.72344   AAACAACGAAGAACA       CCCTCCCAACCGT GTGC GCGGTCAGGAGGG        TGCTTCGCCGTAGAC  65 56
IRT44_RS10405 2112503 .. 2112523 +  -5.3  -2.56273   GGAAAACAGCAAGCT            CTAGTCGTG CGT CCCGCCTAG            TCCGTTCCCTCTGCT  47 22
IRT44_RS10410 NONE
        accD NONE
        accA 2114670 .. 2114695 + -14.1  -5.59502   ACAGATTGGTGCCTA         CGCCTCCTTCTG ATC CAGA-GGAGGCG         TTTTTTGCTTTTTTC 100 13
        pfkA 2115876 .. 2115896 +  -4.6   -3.0782   ATCAGTTGGCGCGCA            CGCTGTCC ATTTA GTACGGCG            TATATTGACAGCTTG  48 12
         pyk 2117777 .. 2117810 + -12.5  -5.07652   ATATGCCTCATCGTT     CTGCCCTGTCCAT ACTGCACG GTGGACAGGGCGG      TTTTCTTTTCGGGCA 100 116
        nrdJ 2120336 .. 2120370 + -12.3  -5.64274   TTACAGCAACCAAAA    CCGGAGAAGAAACGAA CTGC TTCGTT-CTTCGCCGG     TTTTTTTGTCCGTCC 100 51
IRT44_RS10440 2120886 .. 2120911 +  -4.7  -3.58565   GCTCAGTACGAAGGA         GGA-GCGTAGCA TGC TGTTTCGCATCC         TTGTGGTCTTGTTTG  54 17
        fxsA 2121319 .. 2121335 +  -5.1  -4.67011   AGGACACGAAAAAAA              GGAGG AATGGCG CCTCC              TTTTTACGTGCCCTT  73 50
         icd 2125396 .. 2125410 +  -2.9  -2.70932   GAGACGATCACCGGC               TTTTG CACTT CAAAA               TAATTGGAGGCGAAC  40 63
         mdh 2126440 .. 2126473 + -13.3  -5.00616   AACAAGCCCTCAAGA     T-GCCTGAGCTCGGTA TTG TACCGGGCTCAGGTTA     TTTTTTGCAGACAAA 100 97
IRT44_RS10470 NONE
IRT44_RS10475 2129108 .. 2129129 + -12.3  -5.27335   AAGGATCATCGTAAA           GCGAGAGTC GCAG GGCTCTCGC            TTTTTCTTTGGCCGC 100 27
        phoU 2129913 .. 2129936 + -12.4  -5.42259   GTAACGCCCATCATA          CCGGGCAGTC CGCG GGCTGTCCGG           TTTTTTTACGGCTGC 100 37
IRT44_RS10485 2131172 .. 2131220 +  -6.9  -3.80745   CCCGTGCGCATGAAA CCCGTTCGG-CTGCTCATACT ATGCGGAGG AG-GTGAGCAGTCCGGATGGG TTTCCCTGTTGTGTT  64 54
IRT44_RS10490 2132495 .. 2132516 + -10.9  -5.27335   TGGCTTCAGTCCGGA           CAGCACC-CG TTG CGAGGTGCTG           TTTTTGTTTGGGCCG 100 381
IRT44_RS10495 NONE
IRT44_RS10500 NONE
IRT44_RS10505 NONE
IRT44_RS10510 2136560 .. 2136580 + -12.6  -4.79667   AAGAGCAGCAAAAAG            CAGCAGCC TGAGC GGCTGCTG            TTTTTGCTGGATTTT 100 15
IRT44_RS10525 2138042 .. 2138054 +  -9.1  -3.84451   GGGCGGTCTTTCATG                CGCTG GCA CAGCG                TTTCCATTTGGCGGG  72 166
        polA NONE
        mutM NONE
        coaE NONE
IRT44_RS10550 2143912 .. 2143939 + -14.2  -4.51097   TTGTCTTCAGTCAGA        GCTGCTTTCTCC TTTG GGGGAAAGCGGC         TTTTGTCGTGCTTGC 100 397
IRT44_RS10555 2145186 .. 2145216 + -11.1  -5.12707   TAAACAGGCAACAAC      CCCCCTGGGAC-CC TTGC GGTGGTCCAGGGGG       TTTTTTGCGATTTCG 100 49
IRT44_RS10560 2146402 .. 2146438 +  -7.2   -3.8969   GAAGAAAGAAGAAGA   CCCCGCCCGGCGCAGTGT CAG GCACAGC-CA-GGCGGGG   TTATTATGTGACTCA  69 68
        nrdR 2148232 .. 2148258 +   -13  -3.80862   ATAATCAATCGGGTA         GACGCCCTTGCG ATG TGCAAGAGCGTC         TTTCCTGCTGCCTTT  85 61
IRT44_RS10575 NONE
        dnaI 2150957 .. 2150972 +  -4.6  -4.30809   TTGCTGCATGATCTG              CCGGCT GAAC AGCAGG               TTTTCATACGTGTTG  67 226
IRT44_RS10590 2151757 .. 2151774 + -11.3  -5.38549   ATACGATGAAGGAAA             CCCTTGG GAAA CCAAGGG              TTTTTGTTATTTCCA 100 40
IRT44_RS10595 2152756 .. 2152796 + -10.7  -4.87626   ATTTGATTATTTAAT  AAATAAGGAAAGGTGGATA CCA TGTTTACCTTTCCTTATTG  TTTTTGGTATTAGGA 100 56
IRT44_RS10620 2157932 .. 2157954 + -10.6  -3.89614   AGCATCTATGAAAAA           CGGAGACG ATTCACG CGTCTCCG           TTTGCTCTATCGCTT  82 143
IRT44_RS10625 2161019 .. 2161036 +  -2.7  -3.53012   CTTGAGGACACGGGA             TTGGTCA TTTT TGACGAA              TTTCACGAGCGCAGC  49 509
IRT44_RS10645 2166612 .. 2166622 +  -3.2  -2.55309   GCCAAACGGGCGGTC                 GTCT TGG GGAC                 CATTTGTTATTAAAC  40 2
IRT44_RS10650 2168222 .. 2168251 + -10.1  -3.37493   ACAGGAAACGCCTGG       GAAGCCGGGGAG CAGCCGT CTCCCC-GCTTC       TTCGTCTCTTAAGGA  72 42
IRT44_RS10655 NONE
IRT44_RS10660 NONE
IRT44_RS10665 NONE
IRT44_RS10670 NONE
IRT44_RS10675 NONE
IRT44_RS10680 2173656 .. 2173667 +  -7.2  -3.28712   AGTTGGCGGCGGAAG                CGGG CATC CCCG                 TTGTCACGCGGGGAG  61 237
IRT44_RS10690 2176251 .. 2176282 + -20.2   -4.2349   GAAAACCAGAACAAA      GCGGTCTGATCGGC ACGC GCCGAACAGACCGC       TTTTGCATGTCCGGC 100 93
        gltP 2177880 .. 2177910 + -16.9  -5.14563   CGTAACACCTTACAA       GCCTCCCGCAGGA ATCGA TGCTGCGGGAGGC       TTTTTTGGTGCACAC 100 36
IRT44_RS10700 2178526 .. 2178543 +  -9.8   -3.7331   TGTCTACACGCTGAA             GCGCCG GTTTTG CGGCGC              TCTTTTCCTGCACGT  77 389
IRT44_RS10705 2179087 .. 2179107 + -11.2  -3.32844   GTAAACAGAACACAA            CCTCATCC CTGGC GGATGAGG            TTGTGCGGTGGAGCA  76 37
IRT44_RS10725 2181989 .. 2181999 +  -3.2  -2.78891   GATGCACCATCCGAT                 CCGA CAA TTGG                 TCATTAAGTTCCAAT  41 8
IRT44_RS10730 2182311 .. 2182334 + -13.2  -5.80817   TGAATAGTGTTGGCG          CAACCTTGCC AATA GGCAGGGTTG           TTTTTTTGTGTTACG 100 34
        mqnC 2183508 .. 2183538 + -20.6  -4.36914   CCGATCCGACACAAA       CAAACACGGAGCCG TGA CGGCTTCGTGTTTG       TTTTATGCAAGCGGC 100 41
IRT44_RS10740 2184843 .. 2184865 +   -12  -5.75538   ACCACGGGTAAGAAA           CACTCGTCCC TTT GGGATGGGTG           TTTTTATTTTTTCCA 100 311
        thrS 2186897 .. 2186922 +  -6.7  -3.13867   TAGATAAAGTCCGTT         GCGCATGGGTG ATAG CACCCGCTCGC          TCTCTTGATCCATGC  56 86
        moaA 2188327 .. 2188352 + -13.3   -5.2204   TTGCTAGGTGAGATA         TGTGCGGGCGC GTCA GCGTTCGCACA          TTTTTGTTCCTTCTC 100 224
        infC NONE
        rpmI NONE
        rplT 2189616 .. 2189635 +   -10    -5.626   GCTGCGCACGACAAA            GCATCCGA GCAA TCGGGTGC             TTTTTTTATGCGCTG 100 49
IRT44_RS10770 NONE
         sat 2191895 .. 2191914 +  -9.2  -5.52023   CTTCTGAGGCAGCGG            GTCCGGGG ATTT TCCCGGGC             TTTTTTCTTCGTCCT 100 58
        ilvB NONE
        ilvN NONE
        ilvC NONE
IRT44_RS10795 NONE
        leuB 2198628 .. 2198667 + -23.8  -4.66833   AGTACCGCAAAAAGA  CCCTGAGTCTTCGTCCGA CGGA TTGGACGGAGACTCAGGG   TTTTTCCGATTGGCA 100 47
IRT44_RS10805 2200299 .. 2200331 + -15.1  -3.68359   TACCTTTTCTTGAAA      CATGCAGCCTTTT CATGAGC AAAAGGCTGCATG      TTCTGCTTTTGAAGG  95 53
IRT44_RS10810 2201480 .. 2201490 +  -6.8  -2.75844   GCGTAGTCTATCCGA                 GACG ATT CGTC                 GTTTCGAATAGAAAA  53 35
IRT44_RS10815 2202275 .. 2202307 + -13.5   -3.9941   TAATAACACAGCAGG      GGCACCGTACAAC GTCACTG GTTGGACGGTGCC      TTTCATTGTGCCCCG  93 38
IRT44_RS10820 2203031 .. 2203045 +  -9.2  -3.69069   CCAGGATCTTCATTT               GCCGCT GCC GGCGGC               TTGTGTTACGGTTAC  73 60
IRT44_RS10825 NONE
IRT44_RS10830 NONE
IRT44_RS10835 2206120 .. 2206140 +  -8.9  -4.25104   ACTGGTGAGAGAAGC            CGCTCCTGC TAA GCAGGGGGG            TTTTCGTCCAACAGG  79 44
IRT44_RS10845 NONE
        rlmB 2208552 .. 2208572 +  -8.2  -5.36364   TACCGCGAGTAACAG            CTCGTCCC TTTTC GGGGCGGG            TTTTTCTATTTTTCG 100 439
        pheS 2210050 .. 2210082 +  -3.2  -3.06696   TGCACATCAAGAAGT      CCAAGCTGCGCGGC GTGGA GTCGCACGGCATGA      TCTGTTCGGCCAAGG  44 371
        zapA 2212521 .. 2212541 +    -9  -4.21936   CGAATCACATAAAAA            GAGGGGCA GTGTA TGCCTCTC            TTTTCCCATTGTCGC  79 42
        larE NONE
        larB 2214229 .. 2214254 + -14.8  -3.05463   CAACCGTAATAAAAA         GAGCCAACCC GACAAG GGGTTGGCTC          TTCGCTCACGGACGT  89 32
IRT44_RS10885 NONE
IRT44_RS10890 NONE
IRT44_RS10895 2218222 .. 2218243 +  -3.6  -3.56092   GAATTGACGCAAAAA           GG-CCACGC TGACC GCGCGGACC           TTTACCAGATAATGG  52 190
IRT44_RS10900 2219592 .. 2219609 + -11.3  -5.09259   CTGACGAACGACAAA             GTCCCCA AACC TGGGGAC              TTTTGTTTTGGGCTG 100 37
IRT44_RS10905 2221185 .. 2221205 + -11.2  -4.37991   AATCGCACGAACGGA            TAGAGGCC CCCTT GGCCTCTA            TTTTCACTGTTTTTG  91 62
IRT44_RS10910 NONE
IRT44_RS10915 NONE
IRT44_RS10920 2224683 .. 2224711 + -13.8  -3.36273   GTGAAACGGCAAACA        GGCAGGCGCGCT GAGGA AGCGTGCCCGCC        TTGCTGTTGGGGGAA  84 12
IRT44_RS10935 2228996 .. 2229054 + -13.6  -2.57132   ACACTCAATAAAAAA CAGTTTGTCTTCAGTCTGAGAG-G-CGA TGAAT TTGACTCTTTCAGAATGAAGACAAACTG ATTGTACCGAAGGAG  78 365
        murJ 2234906 .. 2234930 + -14.3  -4.17089   ACAGCCGGGCTTCGT          CAGCCGGATCG TAC CGATCCGGCTC          TTTTACCAGTTTGAG 100 152
IRT44_RS10965 2238063 .. 2238105 + -20.7   -4.6645   GCGGCATGAAAACAA GGGCTGTACCGTAAACGGA ACACC TCCGATTACGGCACAGCCC TTTTCTCTGTCTGTC 100 51
IRT44_RS10980 NONE
IRT44_RS10985 2242769 .. 2242806 + -12.1  -3.85698   GGTCAACAATGGAAG   CAGGACCCCATCAAT-CT CTT AGCACAGATGGGGTCCTG   TTTGTCAAAGGGAGG  86 75
IRT44_RS10990 2243818 .. 2243867 +  -2.1   -5.0133   TGATCCCTTGACCAC GGGC-ACTGGTTTCCTGC-CCGG CATTGA TCGGAGCAGGAAAGCGCCCGCCC TTTTTTGCAAAAATC  70 30
IRT44_RS10995 2245938 .. 2245955 +  -7.1  -4.32201   ATTACACTGTAAACA             TGAATGA ATAA TCATTCA              TTTTGCATTGATTCG  74 253
IRT44_RS11000 2246638 .. 2246660 +  -5.5  -3.21912   AAACGTGAAGACTGA           GCGTTCGCT CAGAT GGCGGATGC           TTCATGACTTGACGC  53 85
IRT44_RS11005 NONE
IRT44_RS11010 NONE
IRT44_RS11015 2249270 .. 2249291 + -15.1  -5.24129   GCGAGCGGTACGGAA           CGGCGCCCT GGAC GGGGCGCCG            TTTTTTGTACGGGAA 100 41
IRT44_RS11020 2249733 .. 2249745 +  -5.5  -2.62292   CTAACGGGGAAAGCG                CGGCA AAG TGTCG                TCCGTTGTAGTCATT  47 129
        trxA 2250204 .. 2250230 + -13.1  -5.60993   GGGCGGGGGCCGTCA         TCAGCATCTGC ACTGC GCGGATGCTGA         TTTTTTTATGCCAGC 100 77
        uvrC 2252173 .. 2252203 + -10.4  -5.14477   CGAAACAGACAAAAA       GGCTGACGCCTG ACGGGAG CGGGCATCAGCC       TTTTTTACGTGTGTC 100 13
IRT44_RS11040 2254823 .. 2254853 + -19.2  -4.81212   GGAACACACATGCTG       TCCCCCTTTTTTCG CCG CGGAAAAAGGGGGA       TTTTCTTCTGGTGGG 100 60
IRT44_RS11050 2256430 .. 2256440 +  -3.2  -3.14211   TCATTCTGTAGGGAT                 TGGG GGA CTCA                 TTCATGGCAAAAGGT  44 30
        sdhA NONE
        sdhB 2258993 .. 2259028 + -20.6  -3.72141   GGGGATGACAGACAA    CAGGCGTGCAAACCGT TACT GTGGTTTGCACGCCTG     TTTGCATGTCGGTAT 100 49
IRT44_RS11080 2265090 .. 2265108 +  -8.9  -5.08824   GGAAAGGCGGATAAA             GGATGTC CGGGT GACATCC             TTTTTTCGCTGAAAG 100 27
IRT44_RS11085 2265576 .. 2265587 +    -3  -2.83915   TCCTGTAATCCAGGA                CTAA AGTA TTAG                 GATTTTTTATGCAAA  41 22
IRT44_RS11090 2266145 .. 2266171 +  -9.3  -4.57569   GGTGAAATAGGCAGA         AGGCGTGCGGC AGGAG GCGGCACGCCA         TTTTTACGGCGCTCG  86 31
IRT44_RS11095 NONE
IRT44_RS11100 NONE
IRT44_RS11105 2268586 .. 2268611 +  -8.3   -6.3578   ACCCGGCCTCCCTTT         TCTTCCCTTGC GAAT GGAAGGGAGGA          TTTTTTTTTTGGAAT 100 50
IRT44_RS11110 2270508 .. 2270533 + -12.7  -5.47159   AAGCAGGAGACAAAA         CCTTAGCCCGGT ATC ACCGG-CTAAGG         TTTTTTGTCTTGCAA 100 20
        gabT NONE
IRT44_RS11120 2273544 .. 2273573 + -12.9  -4.84311   TTCATAGCAGAGGTT       GAGCCGATGCCTG CATG CAGGTATCGGCTG        TTTTGTTCTGTGGGG 100 57
IRT44_RS11130 2276464 .. 2276496 +  -5.6  -4.32482   GAGCTGAATGAAAGG     GGCTG-TCCCGTG AAAAATGG CAGGGGAACAGCC      TTTTGCATTGTAAAT  69 34
IRT44_RS11135 2277783 .. 2277822 + -12.9  -5.02074   GTCGAATGGAAAAAA  GCTCAGCTTTCCGACGGC TCGAT GCAG-CGGAAGGCTGGGC  TTTTTTGCAAACTAG 100 49
        cysK 2278882 .. 2278920 + -16.3  -3.05294   TTTGAATAAGGGGCA  TGTTAATGAGGCCGTCCT GTAG GGGACGGC-TCATTAACA   TGTTAGAGAGTTTCG 100 32
IRT44_RS11145 NONE
IRT44_RS11150 NONE
IRT44_RS11155 NONE
IRT44_RS11160 NONE
IRT44_RS11165 2283238 .. 2283253 +    -4  -2.78891   GAAACAGGGGGAACG              TTCATG GTGA CATGGA               TGATTGCGTTGAAAT  44 44
IRT44_RS11170 NONE
IRT44_RS11175 NONE
IRT44_RS11180 NONE
IRT44_RS11185 NONE
IRT44_RS11190 2286934 .. 2286947 +  -2.3  -3.36273   GCCAGCTTTCGTTTC               GCGGT GCAG GCTGC                TTCCTGTTCCCAAAA  46 75
IRT44_RS11200 NONE
IRT44_RS11205 NONE
IRT44_RS11210 NONE
IRT44_RS11215 NONE
IRT44_RS11220 NONE
IRT44_RS11245 NONE
IRT44_RS11250 NONE
IRT44_RS11255 2299501 .. 2299517 +  -2.9   -4.3739   CGAAAAGATGGCCAC              GTCGTTT TTC AACCGGC              TTTTGTCAAGCGGTA  64 188
IRT44_RS11270 NONE
IRT44_RS11275 NONE
IRT44_RS11280 2305341 .. 2305371 + -17.7  -3.21182   TGGAAAAGGAAAAAA      CGGGGTGCTT-GCC ATTG GGCCAAGCACCCCG       TGTCTATTATTCCTT 100 50
IRT44_RS11300 NONE
IRT44_RS11305 2310605 .. 2310623 +    -3  -5.00884   GAAGGGAGGGAATCG             TCCGCATG AAC CCTGCCGA             TTTTTTGGCCGGAAT  73 53
IRT44_RS11310 2311352 .. 2311395 + -12.7  -4.25104   TGCACAGACGGATAA TG-CAACGCCTCTAAAGGTGG GTTA CCG-CTTTAGAGGCGTTGTCG TTTTGATCCGCACAA 100 54
IRT44_RS11320 NONE
         gmd 2315474 .. 2315491 +  -6.3  -5.95166   GCATGTGCCGGGAAA             CAGTCTT GCCA AAGGCTG              TTTTTTTTCGTTCCG 100 104
IRT44_RS11330 2316810 .. 2316821 +  -7.2  -3.76402   CGGATGGCCGCCTGG                CCGC ACCT GCGG                 TTTGATCCATACAAT  67 44
IRT44_RS11335 2318524 .. 2318560 + -12.5  -2.73124   AAAGAAATAATACAA   TGAAGACAAGGGC-TG AAGCTG CGCGCCCTTGTCTTCA    CTTTACAGCATGGAG  77 31
IRT44_RS11340 NONE
        pepV 2322113 .. 2322128 +  -5.4  -2.60075   CCAAATAGAGAAGGA              GGAGCA CGCA TGTTCC               ATTACTTGGCAAAGC  47 33
IRT44_RS11350 NONE
IRT44_RS11355 NONE
IRT44_RS11360 2325220 .. 2325247 +  -7.1  -5.75342   CGCTCCAAAGCAGAA        GAGACGTTC CGATTCGGAA GAACGTCTC         TTTTTTTTGGGCAAA 100 201
        racE 2327955 .. 2327976 + -17.3  -4.39318   TGTCTACACGCTGAA           GCGGCGCCA ATCA TGGCGCCGC            TTTTCGCTTTGGTTC 100 394
IRT44_RS11380 2329153 .. 2329176 +  -9.5  -5.26875   ACAGCGCGCACGAAT          CCACGCCCG AATCGG CAGGCGTGG           TTTTTTGCTTGCGGC 100 40
         rph 2331919 .. 2331938 +  -3.4  -5.08824   CCCAGAGGGCACCAA            CGGGTTCG GATA CGACCCGG             TTTTTTACCTGCCGG  76 478
IRT44_RS11400 2332682 .. 2332715 +  -8.8  -3.55368   TAATGGCTAGAATTG     CATCGCCCGTACCG ACTGCA TGTTGCGGGCGGTG      TTCTGTGGATTCAAT  70 31
         tig 2334107 .. 2334132 + -13.4  -4.62302   GACTGCCAAGCGATA         CAAGGCACGA TAATGT TCGTGCCTTG          TTTTTCACCATCTTG 100 91
        clpP NONE
        clpX 2336114 .. 2336134 + -16.9  -4.67755   GAAACGCCATCCCAA            CCACCCCGA TCG TCGGGGTGG            TTTTTCCATGACTCT 100 53
        lonB 2338231 .. 2338245 +  -7.1  -4.74706   CGCGATGTTCAAAAA               CGGCT GTCTG AGCCG               TTTTTGCATGTTAAG  79 128
         lon NONE
        yihA NONE
IRT44_RS11435 2342751 .. 2342776 + -11.8  -5.76633   GAAAATGTGAAAAAA         CGGGACTGGC ACAAAA GCCAGCCCCG          TTTTTTTATCTGTCA 100 96
IRT44_RS11445 NONE
        hemA NONE
        ccsA NONE
        hemC NONE
IRT44_RS11465 NONE
        hemB NONE
        hemL 2352029 .. 2352057 + -14.6  -4.17906   GCCGTTAGGCCGCAT        GCTGACGCCTGT ACTCG ACTGGCGTCAGC        TTATTTAATTTGATT 100 158
IRT44_RS11500 2355517 .. 2355531 +    -5  -2.81464   AAATGTGGACAAATC               GCAAGA AAA TTTTGC               TATAATCAGTAGTGC  48 43
IRT44_RS11505 2357518 .. 2357557 + -15.9   -4.3295   CCATGAAGCAACAGC  GAAAGCCC-CCGTCCG AACAGCTGC CGGACGGAGGGCTTTC  TTTCGTTTTATTCGG 100 77
IRT44_RS11515 NONE
IRT44_RS11520 2361177 .. 2361191 +  -2.8  -3.53012   GGTGGATGGTATCAT               GAAAGA GGA TCATTC               TTTGAACGAAGAGAG  49 106
        hemE NONE
        hemH NONE
        hemY 2364621 .. 2364640 +  -9.2  -5.50499   CACTTGACACAAAAA            CCGGGGAA TTGA TGCCCCGG             TTTTTTTGCGTATCC 100 14
IRT44_RS11540 NONE
IRT44_RS11545 NONE
IRT44_RS11550 2368685 .. 2368709 + -10.7  -5.59357   AGGCCTTTTGACAAG          CAGCGTCTCAC AGA GTGGGGCGTTG          TTTTTTTGCTGTCCT 100 30
IRT44_RS11560 NONE
IRT44_RS11565 2372401 .. 2372411 +    -4  -3.55444   AGTGCCGCGTCCAAC                 CATT GTG AATG                 TTTGGGAAATGCACA  52 18
IRT44_RS11570 2373116 .. 2373138 + -12.8  -6.09196   GTACCGCGAAATGAT           CCTTTCGTCC TTT GGATGAAAGG           TTTTTTTATTTTCCG 100 327
IRT44_RS11575 NONE
IRT44_RS11580 NONE
        murC 2378670 .. 2378691 + -10.1  -5.31275   AAAACGGCAAAAAAA           CGTCCGGAT GACG GTCCGGGCG            TTTTTTGTGATGAAA 100 57
IRT44_RS11590 2379915 .. 2379931 +  -2.9  -4.01419   GGATTACCCGGTTCA              GCAGGTT GTA AATCCGC              TTTGATTCCTTCGTC  58 156
IRT44_RS11605 NONE
IRT44_RS11610 NONE
IRT44_RS11615 NONE
IRT44_RS11620 NONE
IRT44_RS11625 NONE
        radC 2385968 .. 2385982 +  -6.4  -2.54896   TTGAAAGAGCAGGGC               TACCTG TAA CGGGTA               TGCGTTGGCTCCGCA  49 17
IRT44_RS11635 NONE
        mreC NONE
        mreD NONE
IRT44_RS11650 NONE
        minC NONE
        minD 2392751 .. 2392770 + -10.8  -4.11664   TTAGCCGAACCAAAA            GAACAGGA GTTT TCCTGTTC             TTTCATTCTTATCGG  84 48
        rodA 2394084 .. 2394137 +  -5.9  -4.65895   GATATAGGTTGTGGA GTCGTACCTTGTTGAGAGACG-CCAC CAT GTGGTCAAATCTCGGCTCGGTACGAC TTTTTCCATACCGGC  76 112
IRT44_RS11670 2394451 .. 2394474 + -13.2   -5.1287   TGGCCCATATCAAAA          GCAGTCTCTC GATG GAGAGGCTGC           TTTTTTGCATGTCGG 100 45
IRT44_RS11675 NONE
IRT44_RS11680 2396223 .. 2396235 + -10.5  -5.55855   GCAGTTGGTGTGAGC                GCGGC CCC GCCGC                TTTTCTTTTTTTCAC 100 28
IRT44_RS11685 2397931 .. 2397945 +  -2.8  -2.80113   GCATAAAATGCCTTG               ACTGTA CAG TACAGG               TATGGTAACCTAATG  41 35
        rplU 2398384 .. 2398402 +  -2.4  -2.73681   AAGATCAATGCGTAA             TTTTGGTG ACG TACCGAGA             TGATTACCGTAACTG  39 26
IRT44_RS11695 NONE
        rpmA 2399071 .. 2399098 + -14.3  -4.83615   AAATAGTTCGGAGAC        GAAAACCCAGC CTTGTC GCTGGGTTTTC         TTTTTATCCGGCATG 100 39
IRT44_RS11705 NONE
        obgE NONE
IRT44_RS11715 2401828 .. 2401849 + -13.1  -5.58454   TTTTGGGAGCAAAAA           GTATGCCTG ACCA CAGGCATAC            TTTTTTTGCTGTGCC 100 122
IRT44_RS11725 NONE
IRT44_RS11730 NONE
        thrC 2405057 .. 2405073 +  -2.9  -2.66435   CGAAAATGCGGGAGG              CGTTTCG TGA TGAACCG              TCCTCTCGTGCGGGT  40 16
        thrB NONE
        pheA 2407031 .. 2407059 + -18.3  -5.15634   AAACTCCCATCGGAA        CGGTTGTTTGACG ACA CGTCAAACAGCCG        TTTTTTCGTGCGCTC 100 171
IRT44_RS11760 2409953 .. 2409976 +   -11  -5.10029   GGGTAAAAGAAAAAA          GCTGACGGCA CGGA TGCCATCAGC           TTTTTTCGCGTTACT 100 35
IRT44_RS11770 2412748 .. 2412769 + -12.3  -3.78775   AAAGTTGAGATGGGA           GGCTGACCCG TTG CGGG-CAGCC           TTTACTCGTCGGCAC  85 33
IRT44_RS11780 2414197 .. 2414221 +   -10  -5.45802   GTGACGCCGTATGCA          GTCCGATCCT GTGAA AGGGTCGGGC          TTTTTCTTTTGCCGA 100 41
        ruvC NONE
        ruvA NONE
        ruvB NONE
IRT44_RS11800 2416656 .. 2416685 + -16.5  -4.53602   TAGCCATGAAAGACG       GAGCCTGCCCTTC AATT GAAGAGCAGGCTC        TTTGTTTGATATAGC 100 38
IRT44_RS11805 2418033 .. 2418044 +  -7.2  -4.58943   ACATACGTCCTTCTT                GCCG ACGT CGGC                 TTCTTTTTGTCTCCA  79 47
IRT44_RS11810 2420260 .. 2420278 +  -5.2  -2.73364   GGATGTGACAATTGA             GCGGTGAT CCC GTCACGGC             TCGTTGGACTGCAGA  48 19
        queA 2421340 .. 2421357 +  -9.8  -4.93365   GCTGATTTTGTAATG             CCGGGG CTTGTC CCCCGG              TTTTTCCTTGTGAAA 100 28
         tgt 2422582 .. 2422598 +  -2.2  -2.61004   AAAAAGGAGGACAAT              CATGCA ACAAC TGCAAG              GCTTTTTGCCCATCA  39 43
        yajC 2422899 .. 2422926 + -12.1  -5.22943   TCATCCACGCGAAAA        CATCCGGCTACC TCAAT GGT-GCCGGATG        TTTTTTACGTTTGCT 100 45
        corA 2424497 .. 2424511 +  -2.8  -2.84527   GCGAAAGTGGCTGTA               GCAC AGCCGGG GTGC               GTTTAGTCAAAATTG  41 25
IRT44_RS11840 2425369 .. 2425391 +  -4.1  -2.84325   TGGCCAATTGCTCGC          CGATCCAGGG AATG CGCTGGA-CG           TCCTGTTTGCCGAGA  43 88
IRT44_RS11850 2427260 .. 2427304 +  -7.2   -2.7419   TCCCAGTGAAACTTT TCCCCTTGCCATTCGTAACAG TTGG CTGATGCGAA-GAAAAGGGGA TGGTTGCCATGGTGT  56 32
        secD NONE
        secF 2429594 .. 2429615 + -15.1  -5.71712   GGCTGAGTGACGAAA           CCGCGGGGG AGCT TCCCCGCGG            TTTTTTTCTCTCCAC 100 35
IRT44_RS11865 2430589 .. 2430608 +  -3.4  -3.39505   CCGCCACCGGACGAT            CAGGCGTA AGTG TTCGCCAG             TTGTCAGTCTCCCGT  47 17
        recJ NONE
IRT44_RS11875 2433555 .. 2433584 + -13.7   -5.4505   ATACTAGCAAGCGTG       GCTCTCTGTCC-CT CGC AGCGGACGGAGAGC       TTTTTTCTTGGCGAC 100 34
IRT44_RS11880 2435969 .. 2435994 +  -7.6  -3.33151   TGCGGCGGATTTTAA         GCACCTGATC GCGAGA GATTGGGTGC          TCTTCATTTGAGAGA  61 18
         dtd NONE
IRT44_RS11890 2437084 .. 2437104 + -11.1  -4.35044   CGGTCTGAGAAAACG            AAGCCGAGC CTA GCTCGGCTG            TTTGTGTTTCAATAC  91 33
IRT44_RS11910 2441359 .. 2441378 +  -3.4  -4.14243   GACGTTTTTGCACCG            GCCGATTC GGTT GACCCGGC             TTTTCAGGTCGGATA  59 44
IRT44_RS11915 2443283 .. 2443328 + -15.6  -5.85244   ACCACGGGAAAACCA TCTCTCGTC-CCTGACATGTC CGGAC GGCATGTCGGGCGGCGGGAGA TTTTTTATTTTGCTT 100 354
        hisS NONE
        aspS 2446520 .. 2446531 +  -7.2  -2.83677   AAGCGTACTTGCACA                GGCG CATT CGCC                 TCTGATACATTGGTT  56 39
        ssrS NONE
IRT44_RS11935 2447654 .. 2447688 + -17.4  -3.43151   GCAGACATAATGATA     CAAAACCCACTACC AGCTTTC GGTAGTGGGTTTTG     TTCATTCATCATTCA 100 87
IRT44_RS11945 NONE
IRT44_RS11950 2450338 .. 2450351 +  -2.3  -4.51765   AGCGATGAATGGTTG               CTTGC CAAT GCACG                TTTGTTTCCATTATG  62 101
IRT44_RS11955 2451779 .. 2451794 + -11.8  -3.08991   ACGAGCGATCAGGTA              CGGGCG GTTC CGCCCG               GTTTGTTGGGAAGAT  77 64
IRT44_RS11965 NONE
IRT44_RS11970 2453717 .. 2453743 +  -5.9   -5.7946   CAGAAGTCACAACAA        CCAGCAAGCG CACGAGGA CGCT-GCTGG         TTTTTTTCTTGCCAA 100 97
IRT44_RS11975 2456140 .. 2456150 +  -5.4  -3.63694   GAAGCAAGGGTGAGC                 CTTG GAA CAAG                 TTGTTCCGCATGGAT  56 28
IRT44_RS11980 NONE
IRT44_RS11985 NONE
IRT44_RS11990 2457198 .. 2457230 + -15.6  -5.09426   GAAAAGTCCATGAAG      ACAGCCCGAACGGT CCACT GCCGTTCGGGCTGC      TTTTTTGCGGTTACG 100 61
IRT44_RS12000 2459622 .. 2459647 +  -9.7  -5.75342   GGTACCGCGAGACAA         GTTCTCGTCCC TGAG GGGATGGGGAC          TTTTTTTTCGCGCAG 100 280
        alaS 2462377 .. 2462402 + -11.8  -3.72893   TCTGGTGAAAGGACA         GGCGGTGGCG AAGTAA CGCCGCCGTC          TTTCCTCGCCACGTA  85 10
IRT44_RS12010 NONE
        ruvX NONE
IRT44_RS12020 2463527 .. 2463550 + -11.7  -5.42259   CTGTAAGAGCAATAA          CGGGAGGGC GATGCA GCCCTCTCG           TTTTTTTGCCCGTGG 100 35
        mltG 2464829 .. 2464855 + -13.8  -5.00616   CAACGATGCGAAAAG         CAGAGGGAACTG ACG CGGTTTCCTCTG         TTTTTTGCCCGCGGG 100 13
IRT44_RS12030 2465619 .. 2465630 +  -3.6  -3.24825   AGGAGACATGGAGCA                TGGG TCAC CCCG                 TATTGATTGGGGTCG  48 62
        ltrA 2468267 .. 2468295 +  -6.1  -2.55015   CGTACGGTGGTGTGA       G-AGGACGGGGGT TAACC ACCCCC-TCCTAC       TCGATTGCCTGAGCT  49 62
IRT44_RS12045 2470533 .. 2470555 + -10.6  -4.09117   CGTATCCCATCAATA           TCCCTCCC GTTTCCA GGGAGGGA           TTATTTCTGACTGAA  84 344
IRT44_RS12055 2471981 .. 2471999 +  -5.2  -3.53012   ATAACCGATACCTTC             CGCATGCC CGC GGTATCCG             TTTCCAAGCCCCGGG  56 149
IRT44_RS12060 2473016 .. 2473063 + -15.9  -3.52472   CAACATTTTCGCCTG GAAAAGAGAAGCAATTCCGCA AAATCG TGTGGGATTGCTTCTCTTTTG TTGGTTTCGGAATAT 100 69
IRT44_RS12065 NONE
        rbsK NONE
IRT44_RS12075 NONE
IRT44_RS12080 NONE
IRT44_RS12085 NONE
IRT44_RS12090 2480423 .. 2480444 + -15.9  -4.10552   CTGTCAACAAACGGA           GGCTGCCTG TATT CAGGCAGCC            TTTCGTTTGCTCCGA 100 58
IRT44_RS12100 NONE
IRT44_RS12105 2482398 .. 2482428 + -13.5   -4.9218   TACAATGCAGAAAAA       GGATGTGATTGAT TTTCT GTCAATCACATCC       TTTTTCTCCTACCTG 100 329
IRT44_RS12125 2485596 .. 2485615 +    -7  -3.85891   TCATTTTCAATGCAG            CGGGCGGC ATAC GTCGCCAG             TTTGGTCCCTTTTTC  67 71
IRT44_RS12175 2493877 .. 2493915 + -12.5  -2.94158   TATGAACAAGAGCGT   GAGTCGAGCCATGTCCG AATCG TGAAAATGGCTCGACTC   CTTCTATTCTTTCAT  78 84
IRT44_RS12190 2496995 .. 2497011 +  -7.9  -4.66833   GTCGATACGTACAGA              TCCAGCC ACT GGCTGGC              TTTTTGGCGTTCGGC  83 421
IRT44_RS12220 2501120 .. 2501142 +  -4.3  -3.26758   GTCGGGATACTGACA           GAAAAAAGT GGAGG ATTTTTTTC           ATTTTCCTCTTGATT  50 28
IRT44_RS12225 2501328 .. 2501349 + -11.6  -5.28755   AGCACCATACACAAG           GCAGGGGA GAGCAG TCCCCTGC            TTTTTTCCTGTCTTT 100 34
IRT44_RS12235 2502363 .. 2502384 +  -7.1  -3.53224   GTTAGACAAACAAAA           CGCGGGCGG GGGA CAGCCGGCG            TTTAAGCGACGCATC  62 44
IRT44_RS12240 2503285 .. 2503304 + -13.6  -5.25893   GGAAGAAAACGGGTG            CCAGGGGA GAAG TCCCCTGG             TTTTTTGCTATCTGT 100 212
IRT44_RS12245 2505339 .. 2505377 +  -8.1  -3.04517   TTAGTTCGTATGGCA  GGAG-ACCTCCCGGATGT TTCG GCTTCCGGGAGGGGCTTC   ATTTTGCGGAGGGCT  62 62
IRT44_RS12250 2506688 .. 2506719 + -19.5  -4.06786   GGAACCTGTAAAAAA      CGCCCTCCGGC-GG TTTGT CCAGCCGGAGGGCG      TTTGTCGTGTTGCAT 100 95
IRT44_RS12265 2509672 .. 2509682 +  -2.4  -3.08312   GCCCGATGTTCAGGT                 GCTG CTC CCGC                 TTAGGTGAATCACTT  42 81
IRT44_RS12270 2511194 .. 2511223 + -15.7   -3.9941   CACGCGATACAACAG       AGGCGTCCTTCCC AATC GGGGAGGACGCCG        TTTCATTGTGCGGCA 100 42
IRT44_RS12280 NONE
IRT44_RS12285 2514976 .. 2514999 + -13.9    -5.252   ATTGTTTTAGTCTGG          CCGCCCTTC GCTCGG GAAGGGCGG           TTTTTTGTCACCATG 100 414
IRT44_RS12290 2516231 .. 2516241 +  -4.6  -2.90029   GGCAGTGATGCCGTG                 CTGC CTC GCGG                 ATTGTATTTGAATGC  47 33
IRT44_RS12295 NONE
        yqeH NONE
IRT44_RS12305 NONE
        yhbY NONE
IRT44_RS12315 NONE
        yqeK NONE
        rsfS NONE
IRT44_RS12330 2521786 .. 2521823 + -11.2  -5.18715   GCGGGAGTGCATAAT   CCTCTCGTCCCTTTCG GCAGTG CGCCAGGGGCGGGAGG    TTTTCTTATTTTTGT 100 297
        leuS 2524357 .. 2524381 + -17.2  -4.97158   GCATCAACCAAATGA          GGCGCGTTCC GGCAG GGAACGCGCC          TTTTATTTGGTGTCA 100 98
IRT44_RS12360 NONE
IRT44_RS12365 NONE
IRT44_RS12370 2533014 .. 2533034 +  -9.7  -5.00138   TGCCCATATGAAAAA            CCGCAGC GATCCAG GCTGCGG            TTTTTCGTTTCGCTC 100 209
        holA NONE
        holA 2534218 .. 2534240 + -11.3  -4.95155   GACCAAAGCAAAAAA           CCCGTGAAC CAGGT GTTCGCGGG           TTTTTCTGATGTACC 100 19
         gpr 2535877 .. 2535891 +  -2.9  -2.72799   CGGTGAGAGAAAAGG               TAGAA AAGGG TTCTA               TCGTCTCTATGACGC  41 105
IRT44_RS12390 NONE
IRT44_RS12395 2537532 .. 2537552 +  -7.5  -4.10331   GTCAGGTATTAATCA            GGCCCGC TGCACAT GCGGGTC            TTTCTCGTTCGTTCG  71 76
IRT44_RS12400 NONE
IRT44_RS12405 2539720 .. 2539734 +  -5.6  -3.01712   AGCACCCGCACGGTC               GGGAGC AAC GCTGCC               TGTTCCCAGGCAAAG  49 69
IRT44_RS12410 2541498 .. 2541524 + -14.6  -3.57651   GAAGACGGCAACAAA         GGGTAAGAGGAA CCC TTCTTCTTACCC         TTCTCTCATGTGCAA  89 42
IRT44_RS12415 NONE
IRT44_RS12420 2543487 .. 2543522 +  -5.2  -2.87344   ATTGAAAACGCCATT    CCGTCCGGCTGTCGAG GCTG CTCGGCAGCCTTCCCG     TATATAGACAAAGTC  49 36
IRT44_RS12425 2545036 .. 2545062 + -10.9  -5.72622   TCCGCATGCAGACAG         GCATCTTCCGT CCAAT ACGGGAGGTGC         TTTTTTGTTTGTGCG 100 334
IRT44_RS12435 NONE
IRT44_RS12440 NONE
        lepA 2548935 .. 2548955 +    -9   -4.2803   GGACGACAAAAAGTA            GGCCTGAC CGCGC GTCAGGTC            TTTTCCATTCCACTA  83 25
        hemW 2550213 .. 2550227 +  -2.1  -3.09516   CTTAGTAAATAGATT               TAGCA CTCGA TGCTG               TTGAGTGCTAACAAC  42 102
        hrcA NONE
        grpE NONE
        dnaK 2553854 .. 2553881 +  -8.6  -5.44119   TGTGAACGAAAAAAA        GTCAAAGTCA-CG GAA TGCTGACTTTGAC        TTTTTTTCAAGTCAG 100 46
        dnaJ 2555055 .. 2555085 +    -4  -2.87132   TGAAAAAATGAAGCG      GGCG-TTCCGCGGC GAGTA GCCG-GGAATCGCG      TCTGTCAGCGAGACG  45 7
        prmA NONE
IRT44_RS12480 NONE
        mtaB NONE
IRT44_RS12490 NONE
        deoC 2559356 .. 2559379 +  -8.8    -5.252   TGACACGTAAGGAAA          GCCTGACCGT ATGA GTGGTCGGGC           TTTTTTCTGCAGGTG 100 38
IRT44_RS12500 NONE
IRT44_RS12505 2561042 .. 2561057 +  -5.4  -3.57462   GCGAGCGAAACGCGT              CCGACTG TTC CAG-CGG              TTTGGCCATCACCTG  55 499
IRT44_RS12515 2562993 .. 2563024 + -13.7  -4.60255   GGCGGACAAAAAACG      AGCGGCATGTCGC AGCAGC GCGGCATGCCGCC       TTTTTGCGCCGTTCT 100 59
IRT44_RS12520 2564698 .. 2564720 +  -5.6  -5.71712   CCGTACTGACACGCT          GA-GCGGAC ATATGC GTCCGCTTC           TTTTTTTGTATCGAC 100 32
IRT44_RS12530 2566667 .. 2566701 +  -9.4  -5.10154   TCCCGTGTTCATTTT    TGGACAAGGAGCCTC TGTAGC GAGGCTCCTTG-CTG     TTTTTCGTTTTCAAT 100 72
        rpsU 2568937 .. 2568947 +  -5.4  -2.78463   CTAATTGACGGAGGG                 CTCA TCA TGAG                 TGTAATGGAGCGACT  48 37
IRT44_RS12545 2569422 .. 2569445 +  -6.7  -4.55295   TAGATACGCACAAAA          GACTCAGTC CCATGC GGCTGGGTC           TTTCTTTATGGCACG  76 58
IRT44_RS12550 NONE
        floA NONE
IRT44_RS12560 2572459 .. 2572489 + -10.6  -5.08824   GACGCATGGGTGTAA      CAGACAGGCGAAC ATTCCC GTTCGCCTGT-TG       TTTTTTGACTGAACA 100 39
IRT44_RS12565 2572816 .. 2572851 + -13.2  -4.55689   AAGACGTGACGGGAC    GAGCCCCGACGCTTGC GGAA GCGAGTGTCGGGGCGA     TTTTCTCTGCATGAT 100 32
        yqfC NONE
        yqfD NONE
IRT44_RS12580 NONE
        ybeY NONE
IRT44_RS12590 2576442 .. 2576479 +    -4  -4.06055   ACTGGCCTGGTGCGG  CTCTGCGGCA-CCGCCTG CAGG CCGGCGGGTGCCTC-GCG   TTTGCTTTACCCACT  59 48
IRT44_RS12595 NONE
         era 2577939 .. 2577951 +  -4.1  -3.38324   AGAAAGGATGATGCT                TCATG CTT CGTGA                CTTTTCTTGGAAATA  50 115
IRT44_RS12605 NONE
        recO 2579109 .. 2579154 + -19.2   -5.1675   GGAACCGCGGGATAA CCTCTCGTC-CCTACACTGTG GAAGA CACGGTGTAGGCGGCGGGAGG TTTTTTGCTGAATCA 100 298
        glyQ NONE
        glyS 2582344 .. 2582374 + -11.7  -5.00616   CTGATGACTGGCTGC       ACACGCCTCCGCC TGCCC GGCGGGGGCGAGC       TTTTTTCCCGCGGAA 100 37
IRT44_RS12625 NONE
IRT44_RS12630 2584010 .. 2584024 +  -3.4  -4.38927   TCCTTCCTTTTTGAA               TGCGGC TGC GCGGCG               TTTATTGTCTGCGGA  61 87
        dnaG NONE
        rpoD 2587201 .. 2587223 +    -7  -5.26119   TATAGGTAGTAAGTG           GCCTACGT GAAGCCG GCGTAGGC           TTTTCTTTTTCCAAC 100 45
IRT44_RS12645 2588205 .. 2588222 +  -4.1  -2.71731   CCTACTGGTTTCAGT             GGCTC AGACTGTA GAGCC              TGCTTGGCCGGTGGA  44 12
IRT44_RS12650 2588436 .. 2588456 +  -6.8  -6.14618   GGAATTGTTATCGGG            GCGCGC AGGCGGTGA GCGCGC            TTTTTTTGTTTTCTC 100 11
IRT44_RS12655 2589770 .. 2589792 + -11.3  -5.25656   AGTGGCGAACGTGTT           CCCTGCCTT GTCAA AAGGCGGGG           TTTTTTCGTGCTTTT 100 44
IRT44_RS12660 NONE
IRT44_RS12665 2591721 .. 2591738 +  -6.9  -3.53012   GCGCGCGCCCGCCGA             CAGGCGG AAAG CCGGCTG              TTTGACCGCAGGCGG  62 48
IRT44_RS12670 NONE
IRT44_RS12675 2595340 .. 2595396 +    -6  -2.96157   GCCTTCTAGAGTGCA CCCCTTAAAGTAGACATTGGAAAAACCC CTT GGGAAAA-CCGATGT-TACTTTAAGGGG TGAATTTTTTATGGC  52 54
IRT44_RS12680 NONE
IRT44_RS12685 2596555 .. 2596576 +  -3.5  -5.14477   GAGTACAGGCGTCAG           CATGCGGCC TAAC GGCCGGGGG            TTTTTTAAGTGTCTA  78 14
IRT44_RS12690 2598578 .. 2598590 +  -2.6  -3.68351   CTCGACGGGCAAACG                CGTC AACAA GGCG                TTTCCGTAATGGCCG  51 417
IRT44_RS12700 2600673 .. 2600691 + -11.8  -2.82933   GATTCTATTCGGTTT             TGAGGGAA CAT TTCCCTCA             TGTGCTCGCTTGGAG  74 61
IRT44_RS12705 NONE
IRT44_RS12710 NONE
IRT44_RS12715 NONE
IRT44_RS12720 NONE
IRT44_RS12725 NONE
IRT44_RS12730 NONE
IRT44_RS12735 NONE
IRT44_RS12740 2604445 .. 2604458 +  -2.3  -3.59698   GGAGTTCGAATCTCT               CCTGG GACG CCATG                TTATATATGCGGTCG  47 14
IRT44_RS12745 2604545 .. 2604561 +  -2.1  -3.17956   TCGAGTCTCGCCGAC              CGCACCA TCA TGGCCCG              TTGGTGAAGTGGTTT  42 19
IRT44_RS12750 2604654 .. 2604671 +  -5.6  -5.96219   ATACACATCCACGAA             GCCTTT TTTGAC AAAGGC              TTTTTTTTCTGCATA 100 47
IRT44_RS12755 2606133 .. 2606175 + -20.1  -3.75332   AACAGTGACCATAGA GACGGAAAAAACCACAGGG CCATT CCCTGTGGTTTTTCCTGTC TTTCGGTTCGCACGT 100 33
IRT44_RS12760 2607279 .. 2607300 + -13.7  -4.56133   GCCGATTGAGAAAAA           GGGAGCCTG TACA CGGGCTCCC            TTTTCATTGTTGACG 100 52
        ablB 2609347 .. 2609361 +  -2.7  -4.71234   GCTGATGAGCATCCT               CCAGG TTGAC CCCGG               TTTTGTCTTCGATTT  66 111
IRT44_RS12790 NONE
IRT44_RS12795 NONE
IRT44_RS12800 2613660 .. 2613673 +  -3.7  -3.40597   GGAGCTGAAGCTGGA               CGGCG ACGT CGGCG                TATTTCGCTGAGGCG  50 1
IRT44_RS12805 2615164 .. 2615177 +  -2.3  -2.80113   GAGCGTGCTGGTTGG               GCGCA CCTC TGGGC                TGTACTGAAGTAATG  39 109
IRT44_RS12810 2616803 .. 2616837 + -11.2  -6.34424   CATCAGCGCTGCAGA     ACGACCCGGCTGCCCG CTG CTGGCCGCCGGGTCCA     TTTTTTTTTTGGAAA 100 106
IRT44_RS12815 2617036 .. 2617076 +  -4.9  -5.71983   AAACGTGATATGAGA TCGACCTTGCGTATGTGTA CACGA TTCACAT-CG-GAGGTCGA TTTTTTTATGATTCC 100 57
IRT44_RS12825 2619262 .. 2619291 +  -3.4   -5.5604   TATTTTGACCCACCA       TCGCCGGTTTAG AATTGA CCCACCCGGCGA        TTTTTTGTTGGTTAG  86 423
IRT44_RS12850 2623257 .. 2623267 +  -6.8  -5.80003   CTCCCTGATCGACAT                 GGTC AGG GACC                 TTTTTTATTTATTGG 100 384
IRT44_RS12855 2625035 .. 2625078 + -10.2  -3.59262   GGTTAAAGGCGTGCG TGTTTTCCCGATCCCGACGG CTTG CCGTCGCCGCCGGGAGAGCA TTTAAGCATGTAGGG  77 100
IRT44_RS12870 2628658 .. 2628683 +  -6.1  -5.00616   AACAGCGAAAACAGG         GAAGGACCGCCT GCC GGGCGGTC-TGC         TTTTTTGCAAGAGAC  81 169
IRT44_RS12875 NONE
IRT44_RS12880 2630582 .. 2630610 +  -2.3  -2.71731   AACATCGAAGGGGCT       GGTGGCGGTGAG TAATTT CTC-CCGCCTGC        TCCTTCAGGAGTGGC  39 11
IRT44_RS12885 2631755 .. 2631769 +  -4.2  -2.78384   CGAAGCGGAGTCGAC               TCGTGC GTA GCAGGA               TATGCTGAAAAGAAA  45 16
IRT44_RS12890 2632368 .. 2632419 +   -14  -4.15453   CGTAAATCAAACACA GCCCTCCCGAGGCAGACAGGCACG-GA TCA TCTCGTGCC-G-CTGCC--GGGAGGGC TTTTAGCGTCAATTC 100 36
        acsA 2640919 .. 2640955 + -14.6  -4.11216   CGGTTTGTCTTCAGT    CTAAAATCTCCTGTGC AGAAA GCGCAGGAGATTTTTG    TTTTACGAATGGGGA 100 366
        thiD 2647630 .. 2647652 + -17.8  -2.64155   ATAAAACTACGGCAA           GAGCTCGAGG TCT CCTCGAGCTC           TCAGTTTGCAGACAA 100 37
        splB 2651150 .. 2651197 +    -4  -2.79679   CGCCGAAGATCGATC GAGCATGCACGGCCGGCCTGGG AGCACG CCC-GGCCGGCCTT-CAGGCAG TATGCTGCCCATGTT  44 44
IRT44_RS12975 NONE
IRT44_RS12980 2652686 .. 2652723 +  -8.6  -5.40072   TAGGCCGCGAAGTGA  TCCCCCTG-A--CGGCGTG TGT CATGCCGCATCCAGGGGGA  TTTTTTTACAGCGGA 100 38
IRT44_RS12985 NONE
IRT44_RS12990 2654007 .. 2654031 +  -8.4  -5.27335   CTAGAACGGCAGTTG          CGCCGCCCTG TTCAT CCGGGCGGCA          TTTTTGTTTGGCGGC 100 37
IRT44_RS12995 NONE
IRT44_RS13000 2655114 .. 2655143 + -14.4  -4.85918   TCACAGCAGAAAAAA       CCCCG-CGGATGT TCATC ACATCCGGCGGGG       TTTTGTTGTGTCATC 100 50
IRT44_RS13020 2659250 .. 2659278 + -18.2  -4.53303   TTGTCTTCAGTTTGT        GCGGAGCAGCCC GACAG GGGCTGCTCTGC        TTTTATGTAAAAATA 100 337
IRT44_RS13025 NONE
IRT44_RS13030 NONE
IRT44_RS13035 2663076 .. 2663096 +  -3.8  -3.71848   GCAACTACTTTTAAG            CAGCCCGG CTGGT CCGGGACG            TTCTTCATAACGACA  54 27
IRT44_RS13040 NONE
IRT44_RS13045 2664826 .. 2664851 + -15.5  -4.08706   ATGAGCGGAAACGAC         CAGCCCTTCCA ATCT TGGAGGGGCTG          TTTCTGTGCTGACAG 100 37
IRT44_RS13050 2665460 .. 2665493 +  -8.9   -4.3208   TTGACTGACAAAAAA     GAG-GGGAGCGTCC GTGTCTA GGACTCTCCCTCTC     TTTTCCCTTCTCCAA  83 48
IRT44_RS13055 NONE
IRT44_RS13060 2667665 .. 2667678 +  -3.1  -2.73364   GGACGCGTAAGTCAA               GG-CGT GAT ACGGCC               TCGTTCGCATACGGC  41 47
IRT44_RS13065 NONE
IRT44_RS13070 2669587 .. 2669621 + -11.5  -4.82128   GGCAGCCGCCAAAAA    CAGCCATCCC-GCAGT CTTC ATTGCCGGGAGGGCTG     TTTTGTCTTTACTGG 100 48
IRT44_RS13075 2670539 .. 2670552 +  -2.3  -3.33922   TGGCAGAGACGTCGT               CCGCT TGTT AGCCG                CTTTTTCGACGGCAT  44 15
IRT44_RS13080 2671354 .. 2671377 +  -9.6  -4.50943   AGCAAGCGAAAAAAA          GCCTC-ACCCG GCA TGGGTAGAGGC          TTTTGTCCATTCTTG  90 49
IRT44_RS13100 2677932 .. 2677961 + -11.5  -5.52384   ATATACGGTCAAAAA       CCTTTGGTCACCTG CTG CGGG-GGCCAAAGG       TTTTTTTCATCCGCA 100 44
IRT44_RS13105 2678477 .. 2678497 + -15.5  -5.40072   AACGACCCGTTCGTC            TCCCGAGGA ATT TCCTCGGGA            TTTTTTTGCACCGGC 100 40
IRT44_RS13110 2679382 .. 2679393 +  -5.8  -2.76696   TACTGAACTGTACGA                GCTG TAAC CAGC                 CTTGTTGGGCACGGG  51 19
IRT44_RS13115 2679778 .. 2679805 +    -7  -4.85195   TACAAAAATCACAGG        GGAACCGCGATGG ACG TCAA-GCGGTTCC        TTTTTCACTTCTTTT  82 50
IRT44_RS13120 2680474 .. 2680492 + -11.7  -3.86312   GTCTGTACACGAAAA             GGACGGG GAGCG CCCGTCC             TTGTTCATTATGCGT  86 44
IRT44_RS13135 2682776 .. 2682791 +  -7.5  -5.14563   AGCGCAATAAAAAAA              GCCGC CAAGAC GCGGC               TTTTTTCATGCACGC  91 108
        rnpB 2684212 .. 2684230 + -14.6   -5.8187   ACGACGTACGCAAAA             CCGTCTGG TCA CCAGACGG             TTTTTTTATTGCCTG 100 53
IRT44_RS13155 2685034 .. 2685067 + -10.4  -5.14563   CAGGAAAAAAAGAAA    GCTCCTCAAGACCCCG TAAG TGGGGTC--GAGGAGC     TTTTTTCGTCAGGAA 100 7
IRT44_RS13165 NONE
IRT44_RS13170 2689562 .. 2689584 +    -2  -3.30124   TGCGCTGATTCCTCG           TTTTGTGC ATGTGGC GCACGAGA           TTGTGCAAGATACGC  44 49
IRT44_RS13175 NONE
IRT44_RS13180 2691602 .. 2691621 +  -9.2  -3.96618   CAGGAAACTGGAGAT            GCTGGGGT GTAC GCCCCGGC             TTCTTTGCCATTCAG  77 57
IRT44_RS13185 2693288 .. 2693319 + -13.9   -4.0056   TATTCAACAACAAAA      CCACCCCTCAACGT ATTCG AC-TTGAGGGGTGG      TTTCTCAATATTTGT  93 102
IRT44_RS13190 2694597 .. 2694614 +  -3.3  -2.80443   CAGCTGGCCGGGCCG             TGACAGG CTGA CCGGTCG              TATGGTAGAGTGTGA  41 23
IRT44_RS13195 2695080 .. 2695110 + -16.3  -5.02476   CCATTGAAAAGAAAA      GCCGACG-TCCTGT CACA ACAGGAACGTCGGC       TTTTTTGACGGGTGT 100 51
        metH NONE
IRT44_RS13220 2703764 .. 2703808 + -11.5  -5.41143   CAACCGTGCCAACAT CACTCGGGCG-GGCGGTATC ATCATC GGTACCGTCGTGCCCGAGTC TTTTTTTGGGGCATG 100 51
IRT44_RS13235 2708593 .. 2708618 + -11.2  -4.37886   GACATGTCCGATACG         GGAGACTCTC AACCGG GGGAGTCTCC          TTTTCTAACACCTGA  91 94
IRT44_RS13245 2710720 .. 2710736 +  -3.6  -4.18018   AAGTAGTGCAGGGCG              CCGGGA ATGTG TCCCGC              TTTTGGATCGAGCGG  62 310
IRT44_RS13255 2712702 .. 2712728 + -13.9  -2.89881   ATCGCAGGCGACAGA         CAGGATTGAAC GTCAG GTTCAATCCTG         TCTATCCCATACATA  80 175
IRT44_RS13260 NONE
IRT44_RS13265 NONE
IRT44_RS13270 NONE
IRT44_RS13275 NONE
IRT44_RS13280 NONE
IRT44_RS13285 NONE
IRT44_RS13290 NONE
IRT44_RS13295 NONE
        lanM 2723478 .. 2723493 +  -3.3   -3.6422   AAAGGGGTAATGAGG              CATGT ATGTGG ACATG               TATTTTACAGCGATC  49 275
IRT44_RS13305 2724399 .. 2724423 + -16.5  -3.15503   TTGACTGCAAACGGA          GCCCCCTTTCT GAG GGAAAGGGGGC          TGTTCACTGTTGAAG 100 202
IRT44_RS13320 2725886 .. 2725913 + -13.6   -3.9461   GGGCCCTTGGACAGC        GAACGGTTTCCT TGCG AGGAAATCGTTC         TTCTTCTTGGGGGCA  90 44
IRT44_RS13325 2726955 .. 2726980 + -11.1  -5.36441   CCGTTTGCATCCAGG         TGTCCGGCAGT ATGT ACAGCCGGACG          TTTTTTGTGTGAGGG 100 42
IRT44_RS13340 2729179 .. 2729211 + -12.9  -4.32804   GTCGAAGTACAAAAA     GAGGATGAG-GAGC AATTGC GCTCTCTCATCCTC      TTTTCACTTAATTCT 100 165
IRT44_RS13360 NONE
IRT44_RS13365 2732494 .. 2732508 +  -4.9  -6.30182   TGTTTGGATAAACAG               GGGGC GACGA GCCTC               TTTTTTTTTCTATGA 100 30
         rnz NONE
IRT44_RS13390 2736569 .. 2736600 +  -6.4  -2.74122   GAGTGTATGGGAAAC      GACTTGGCGGGCCG CTCG CGGTTCGCTACGCC       ATGTTTGTGCTGGGG  51 76
IRT44_RS13395 2737206 .. 2737233 +  -9.9  -5.12707   CCCCCAATCCAAAAA        GCCTGCAGCTTC TTGAT GGAGC-GCAGGC        TTTTTTGGCGTTTGC 100 10
IRT44_RS13400 2737483 .. 2737530 +  -7.2  -5.14563   CCAGGCACAACTGGC GGGTATGAGCAAACAGGGAGCG GACACG CGCTCCCT-TTTGCTT-TGCGC TTTTTTGGTGACGCA  91 42
IRT44_RS13405 2738634 .. 2738662 +   -11   -4.4009   ACGTCTAAAAAAGAG        AGGCAGGCGATG CTCTT TATCGCCTGCCC        TTTTGTGCCGTCCCG  91 60
IRT44_RS13415 2739641 .. 2739671 +  -7.6  -4.52873   ACCGAATTCCTGCAT       CAGGCCCAGC CATTTTTCCAC GCTGGGCTTG       TTCTTTTTGTCCCGG  78 121
IRT44_RS13425 2742090 .. 2742126 +   -14  -3.91897   ATTGCTTGCGAAAAC   GAAAAGCTTGCGGTTCCT CAC AGG--CCGCAAGCTTTTC   TTTGTGAATAGACGC  93 271
IRT44_RS13440 2746684 .. 2746701 + -12.7  -4.88228   CGTCAAAAAGGAAAA             CCACCCG GTCC CGGGTGG              TTTTTCCTGTTAGCT 100 60
IRT44_RS13445 2747147 .. 2747168 + -15.9  -5.52384   ATCCATCATAGAAAA           GCCATCCGC CGCG GCGGATGGC            TTTTTTTGATGCGGC 100 61
IRT44_RS13455 NONE
IRT44_RS13460 2750698 .. 2750723 +  -5.4  -3.83561   AGGACAAACGGAAAA         TGCCGCATGCT GGCGA GGC-TGCGGCG         CTTTTTTTGGGCACA  61 40
IRT44_RS13465 2752038 .. 2752064 +  -9.5  -3.49951   CATTGGCGCTGTCGG         TTGTAACTGGC AGCGA GCCGGTTACAG         TTGTCTCCCCATCTC  74 73
IRT44_RS13470 2752771 .. 2752793 + -11.3  -5.76237   CCGCGAGTAATTCAA           CTCGTCCCT TTCGT GGGGACGAG           TTTTTTATTTATGTA 100 370
IRT44_RS13475 2754212 .. 2754251 +    -8   -5.4505   CATCGGGCAGTCCTT GCCTGCAGACAAGGGTTC GTCGAA GAACAC--GTCTGCAGGC  TTTTTTATTACAGGA 100 54
        fosX 2755641 .. 2755659 +  -8.8  -4.93968   AGCAAGAAGAAGAAA             GCTCGGCA TGA TACCGAGC             TTTTTCATTATCCAT  93 15
IRT44_RS13495 2757214 .. 2757238 + -12.9  -4.10672   CGGCGGCAACACTTA          CAGGCACGG ATGATGA CCGTGCCTG          TTTGCTTTCCGTTAC  91 45
IRT44_RS13505 NONE
IRT44_RS13510 2760184 .. 2760203 + -12.2  -5.66684   ATCTCACGTAAAAAA            CGACCTGT CGAT ACAGGTCG             TTTTTTTATGGGTTG 100 30
IRT44_RS13525 2762959 .. 2762993 +   -18  -5.24129   CCGGGTCCCGGGAAT     GGAAAGGCTGTCGG CGCGCGA CCGGCAGCCTTTCC     TTTTTTATGGACAGG 100 120
IRT44_RS13530 2764403 .. 2764421 +  -4.5  -5.14985   ACTTCCTCGACAAAA             CGACCTG CTGGC TGGGTCG             TTTTTGTGTATTTCC  80 242
IRT44_RS13535 NONE
IRT44_RS13540 2765967 .. 2765977 +  -8.2  -5.06414   TGTGTCTTCATCGCG                 CCGG CGG CCGG                 TTTTTGTTCACGGAC  91 237
IRT44_RS13550 NONE
IRT44_RS13555 2769156 .. 2769167 +    -3  -4.42788   GCCGGGTAATGCGTC                TGTT ATGA AACA                 TTTTATCACGTTCGG  61 392
IRT44_RS13565 2769560 .. 2769578 +  -7.4  -5.48054   GAAATCGCCCGCTAA             GCTGCC ACATTTC GGCAGC             TTTTTTGCTTTTGCT 100 26
IRT44_RS13570 2770481 .. 2770530 +  -3.4  -4.51378   TAAGCGAATGAAAAA GCCGTGCCATTCCGGCCGCCAGCC AAAA GGC-GGAGGAGCGAAAG-CACGGC TTTTGTCGTGTCCGT  64 51
IRT44_RS13590 2773966 .. 2773992 +  -5.9  -3.17146   TATGAATGGGGTGTC        GCTGCATG-CGG GCCG CTGTCATGTAGC         TGTGTTGTGGCAAGA  53 80
IRT44_RS13595 NONE
IRT44_RS13600 2776548 .. 2776568 +  -2.5  -2.90725   CAAACGGCGCGGAAA            CGTGCGT ATGAAGG AGGCACG            TGTGATGTCGTTTCA  41 67
IRT44_RS13605 NONE
IRT44_RS13610 2777097 .. 2777132 + -19.9  -4.52589   CAGCCGCCCAGACAA    CAAGCTCTCTGTCGG TTCATT CCGGCAGAGAGCTTG     TTTTGTGTGCGCCGG 100 110
        gcvT NONE
       gcvPA NONE
       gcvPB 2785636 .. 2785656 + -11.1  -4.78149   CATAACCGATTGAAA            CCGCCCG TTTTTTT CGGGCGG            TTTTTGCGTTGTCCA 100 36
IRT44_RS13645 2786813 .. 2786831 + -10.2  -5.85425   ACGTGGATCATGTGC             GCCGGGTG GGT TGCCCGGC             TTTTTTGTTTGTTTA 100 57
IRT44_RS13650 2787963 .. 2787996 + -16.1  -5.55664   ATACGGATTAGACAA     GCTCTCAGGGGCC AAACCACC GGCTCCTGAGAGC      TTTTTTTCATGCTCG 100 86
IRT44_RS13655 NONE
IRT44_RS13660 2789885 .. 2789909 + -15.7  -3.19371   GAGCAGTAAAAAGCA          GCGGCTACCCG ATA CGGATAGCCGC          TTCACTTGCGTAGAT  95 39
IRT44_RS13670 2792452 .. 2792480 +  -6.6  -4.72029   TACAGACGTTTGCCG       TGCCCGCG-CAGG TTTT CTAGACGCGGGCG        TTTTGTTGCCTTCCG  79 65
IRT44_RS13675 2794784 .. 2794800 +  -4.3  -3.40403   TCCTCCCCGTCATGG              CCTGATG ATG CAGCGGG              TTGTGCTCACGCGGG  52 21
IRT44_RS13685 2796658 .. 2796671 +  -6.7   -4.7254   CGTGCGTTTGAAAAG               CCTTG GCCA CAAGG                TTTTTCATCCCGCCT  79 89
        mntR 2797154 .. 2797174 + -12.6  -5.32882   GAATAACTGCACTGA            CGCAAGCC TGACC GGCTTGCG            TTTTTTGTCGTAATC 100 35
IRT44_RS13695 2798170 .. 2798194 + -15.8  -4.18018   GACCAAACAAAAAAA          CAGGCTGCCT CGTAT AGGCAGCCTG          TTTTACATAAACGGA 100 9
IRT44_RS13710 2800232 .. 2800247 +  -4.8  -3.06671   TTTCTCTAGTAAAAA              TCTTTT TACA AAAAGA               TGTTCAACTGAATCT  48 75
        aroQ NONE
IRT44_RS13720 NONE
         efp 2802450 .. 2802474 + -15.8  -5.63517   GATGTTTGCACGTAA          GGCTGTACCC AAACA GGGTACAGCC          TTTTTTCTTTGCCGG 100 46
IRT44_RS13745 2805041 .. 2805051 +  -2.4  -2.73994   AGCACCGGTTAGAGG                 AGGG AAG CCCA                 TCATGTTGGAAACGT  39 100
IRT44_RS13750 2805623 .. 2805656 + -12.3  -5.46657   GTCTCTTCGCATGCG     CGTCTGCCGTTTGGC GCTT GCCCTGCGGCAGGCG      TTTTTTCTTGGCATA 100 100
    spoIIIAA NONE
    spoIIIAB 2807210 .. 2807222 +  -4.1  -3.28791   GTGCGGCCTGCTGGT                CGTCA TCC TGATG                TTCTAAAGGCGAGGT  48 7
    spoIIIAC NONE
    spoIIIAD NONE
    spoIIIAE NONE
    spoIIIAF NONE
    spoIIIAG NONE
IRT44_RS13790 2811166 .. 2811205 + -15.9  -4.20918   CGGGTATGCTTGTAA  GGATTTTCCCTCTTCTC CAGCGA GAGCAGAGGGGAAATCC   TTTCTTGACGTTGGG 100 119
        accB NONE
        accC NONE
IRT44_RS13805 2813683 .. 2813705 + -14.9  -4.33105   CGGCAGCGGAACCAA           TGCCCCCTG CTAGC CAGGGGGCA           TTTTCCTCATCATTG 100 42
        amaP NONE
IRT44_RS13815 2814544 .. 2814560 +  -7.3  -3.55203   CCCGGCAAGTTTCGG              TGATGGT CGG ACCATCG              TTTGCAACGGATTTT  64 23
        nusB NONE
IRT44_RS13825 2815967 .. 2816005 +  -4.6   -3.6608   TGGATGAAGTTGAAA   GGCGAACGTTAAGAGGAT ATG AACTTTTTAAAATTCGCC   TTTACATAAACTCCT  56 14
        folD NONE
        xseA NONE
        xseB NONE
IRT44_RS13845 2819488 .. 2819513 + -11.1  -5.69262   CATTTATCGACAAAT         GCTGGCTATCC GCAG GGAAAGCCGGC          TTTTTATTTTTCTCC 100 77
         dxs NONE
IRT44_RS13855 2822418 .. 2822441 +  -8.2  -5.72616   AATGTGGGACAAAAA          GCCTCGAT CACGCAGA ATCGAGGC           TTTTTTTATATGCAT 100 41
IRT44_RS13860 NONE
        argR NONE
        recN 2825553 .. 2825574 +  -8.8  -5.40072   GGGCAACGACGAAAA           GCTGTCAA CGGCGT TTGACAGC            TTTTTTTACGGGGCG 100 8
      spoIVB 2827135 .. 2827166 +  -9.4  -3.37198   AAGCACGCTTCAATA      GCCGTCAGCGCTC TCCCGTT GGGCGC-GGCGGC      TCTTCTCTATGCGGG  69 106
       spo0A 2828327 .. 2828370 +  -9.1  -5.44119   TGGAAGCATTACGAG TACCGCTTGTTTATTGGTT CCGTAT GACCAATGAAGAAGTGGTA TTTTTTTACAATCCA 100 78
IRT44_RS13885 NONE
IRT44_RS13890 2830463 .. 2830482 +  -7.1  -4.44608   TTTTCTGGAAACCTG            CCCCCTT ATCCAA GAGGGGG             TTCTTTTTGCCTAGC  76 53
IRT44_RS13895 NONE
IRT44_RS13900 2832190 .. 2832234 +  -9.4  -5.47218   CCACCTCTTCCCGAA TGGTTCGTTCCGGCAGCATGGT GAC ACCGAGCTGCTGGA--GGACCA TTTTTTTGACTGCAC 100 171
IRT44_RS13915 NONE
IRT44_RS13920 2835026 .. 2835052 + -20.2  -4.85782   GAAAGCGGTTGCTGT         GGAGGCTGCGCA AAT TGCGCGGCCTCC         TTTCTTTTTCGCCAA 100 78
        steA 2836276 .. 2836314 +    -3  -3.36878   CGCAGTTGGGCGTTT   TAGGAGGCGGCGGAATTG ATT CACTTTCGTCATCACCTG   TTGTCGCTGGCTGCA  47 23
IRT44_RS13930 NONE
IRT44_RS13935 NONE
IRT44_RS13940 2838385 .. 2838413 + -18.3  -2.51702   CCGGCTGAAACGAAA        TAGAACCAGGTCG TCA CGGCCTGGTTCTA        GTCTTCGTCGTCTTC 100 23
IRT44_RS13950 2840990 .. 2841002 +  -2.7  -4.80455   GCTCCTGCACAAAAT                TGAAG CGC TTTCA                TTTTCTCTTTCGATG  70 124
IRT44_RS13955 2842212 .. 2842229 +  -9.8  -3.04398   TTACCACCGCTAATA             CCGCCG TTTGAC CGGCGG              CTTTTCCGGGAGCGC  68 28
        lpdA NONE
IRT44_RS13965 NONE
IRT44_RS13970 NONE
IRT44_RS13975 2847215 .. 2847240 + -13.4  -4.66163   GCCAACGTGACCAAA         GGCCAGATTC ACCTAG GAATCTGGCC          TTTTTGCATGGCAGT 100 40
IRT44_RS13980 2849577 .. 2849599 + -17.8  -4.45544   GAGCACATACAAAAA           CCCCCTTCCA CTG TGGAAGGGGG           TTTTACTTGGTACGG 100 49
IRT44_RS13985 NONE
         mce NONE
IRT44_RS13995 2854221 .. 2854242 +  -3.7  -3.53224   GGCTATGGTGCTATT           GAT-CCCTGC GCG GCAGGACATC           TTTCAGGGAGGAATC  52 279
IRT44_RS14000 2855393 .. 2855421 + -14.6  -4.84359   GCAATGCAGTGTGCG       GGCCGGGTACCCT GAGT GGGGT-CCCGGCC        TTTTTGTACGCGTGC 100 41
IRT44_RS14005 2856763 .. 2856779 +    -5  -3.53811   CAGGAGCGGAGTGTA              GCGCGG ATTTC CCACGC              TTTGCCGACCATGCG  56 25
IRT44_RS14010 2857824 .. 2857834 +  -2.4  -4.58395   CCTGCCGAACGTGGG                 GGAG ATG CGCC                 TTTTTACCGACTGGC  62 365
      spoIIM 2859397 .. 2859418 +  -2.3  -3.72576   GACTTCTGGAACACC           CCT-CTACTA TAA TAGGAGCAGG           TTTCATGCGAGCGGG  50 72
IRT44_RS14025 2859909 .. 2859939 + -12.1  -5.60993   GGAGGACTTTAAATA       GAAAAACTTCTCT GTGCG GGAGAAGTTTTTC       TTTTTTTCTGCCCCG 100 25
         ald 2861223 .. 2861236 +  -3.1  -3.54741   CGGGGAGGATTGCAT               CGATG CGAG TATCG                TTTCGGCGGCTGATG  49 92
IRT44_RS14035 2861461 .. 2861471 +    -4  -3.33744   CTACCTGACGGGAGA                 GTAA CCG TTAC                 CTTTTTCGCGGGAAA  48 22
        xerD 2862431 .. 2862446 +  -4.7  -5.55664   CGCAAAAACCCACCC              GAGAG CGTAGT CTCTC               TTTTTTTCCTCGTCA  91 16
        deoB NONE
IRT44_RS14050 NONE
IRT44_RS14055 2865905 .. 2865929 + -13.5  -3.01712   CCCGAAGCAAACACA          GGGAGTGCGGT GTT GCCGCACGCCC          TGTTGCGCAGGGGAG  80 61
IRT44_RS14060 NONE
IRT44_RS14065 2868534 .. 2868565 + -17.6  -4.10429   CCCCGGTTCTGCAGG      GATAAGGTATATGG AACC CCATATACCTTATC       TTTTGCGGACTGGTT 100 78
IRT44_RS14070 NONE
IRT44_RS14075 NONE
IRT44_RS14080 NONE
IRT44_RS14085 2872597 .. 2872635 +  -8.4  -4.15044   CAACTAGAAACGCAA  GGACAGGCATTCCCGATC AATCC GATTGGGAAT-CCT-TCC  TTTCTTGACAACACG  76 34
IRT44_RS14090 2874878 .. 2874901 +  -8.8  -4.86731   TGATCTGAATGCGGT          CCCCTTTCGC CCGG GCGAAGGGGC           TTTTCTTTAGCAAAA  91 33
IRT44_RS14095 2876292 .. 2876303 +  -2.2  -6.04419   CCACGAATGTGACCT                TCGG CTGC TCGA                 TTTTTTTGTTCTTTT  95 74
     spoIIAA NONE
     spoIIAB NONE
        sigF 2877941 .. 2877970 +  -9.4  -5.60993   TTGCAAACAATCAGG       GACCAGATTGAGC AGTAA GCTCG-TCTGGTC       TTTTTTTATGCGCGA 100 8
IRT44_RS14115 NONE
IRT44_RS14120 2879175 .. 2879203 +  -4.6  -2.61912   TATGGATATGCCATA       TGCA-TGCGGTCA GGAG TGGCAGCACTGCA        CTTATGAATCAATAA  44 98
      spoVAC NONE
      spoVAD NONE
      spoVAE NONE
IRT44_RS14140 NONE
IRT44_RS14145 2883271 .. 2883298 +  -7.8  -4.12532   ATGCTAGGTGGTTAC        GGCAACTG-GC CAATTGC GCTCAGTTGCC        TTTATGTATAAAGAC  74 124
        lysA NONE
IRT44_RS14155 2885364 .. 2885375 +  -5.8  -2.78816   GGGGTTGTATCCCTC                CCAG TCTG CTGG                 TATGCTAGAAGATAG  51 184
IRT44_RS14160 NONE
IRT44_RS14165 NONE
        scpB NONE
IRT44_RS14175 NONE
IRT44_RS14180 NONE
IRT44_RS14185 2889865 .. 2889882 +    -7  -5.70522   GCGCTGGTTGGAAAA             CTTCCC GGTCGA GGGAAG              TTTTTTGTTGTTCTT 100 49
IRT44_RS14190 NONE
        resA NONE
IRT44_RS14200 NONE
        ccsB 2894278 .. 2894297 +  -7.1  -3.55071   GCAGACGCCGCAAAA            TGCTGGC CTGTCC GCCAGCG             TTTGGGACGATCTGA  62 46
IRT44_RS14210 NONE
IRT44_RS14215 NONE
IRT44_RS14220 2898076 .. 2898093 + -12.7  -5.53991   TCTCCAATACAAAAA             CGGCTCC CGCG GGAGCCG              TTTTTTTACTGCCTG 100 92
IRT44_RS14255 NONE
IRT44_RS14260 NONE
IRT44_RS14265 NONE
IRT44_RS14270 NONE
IRT44_RS14275 NONE
IRT44_RS14280 2910370 .. 2910380 +  -2.4  -2.53641   TGCGTGTCCGGTCGA                 CAGG ATT CCCG                 GTTGCTCCTCCCTTC  38 66
IRT44_RS14285 2911220 .. 2911241 + -14.5  -4.49937   CTGTACAATAAAACA           GCACCTAGC GGTT GCTAGGTGC            TTTTGCTGTTCTTAC 100 59
IRT44_RS14295 2913628 .. 2913650 + -13.5  -5.48213   GTGCGAAAAACAAAA           CCTCCTTGG TTCGT CCAAGGAGG           TTTTTGTTTTGAGTG 100 60
        prsW 2915689 .. 2915708 + -11.4  -5.64274   CTGCCGCAAGCAGTG            GGACCGGC AAGC GCCGGTTC             TTTTTTTGTCGGTAA 100 283
IRT44_RS14320 NONE
IRT44_RS14325 2918458 .. 2918471 +  -6.7  -5.06472   GACGACGCGAATGGG               GCTTC GACA GAAGC                TTTTCTTGTTTCTAT  91 94
         cmk 2919196 .. 2919216 +  -4.8  -5.40474   AACGGTCGGGTGAGT           CGATACAGT GAGG AC-GTATCG            TTTTTTTCACAGCCT  87 15
IRT44_RS14335 NONE
        rpsA 2921137 .. 2921158 + -14.5  -5.30686   GAAGTAAATACCGAG           GGGATACGC GCAG GCGTATCCC            TTTTTTATAGGTCTT 100 34
         fni NONE
IRT44_RS14350 NONE
IRT44_RS14355 NONE
IRT44_RS14360 NONE
         der NONE
        plsY NONE
IRT44_RS14375 NONE
IRT44_RS14380 2927615 .. 2927631 + -10.9  -5.72207   GATTCAAGAAAAAAA              GAGGGAT GTC ATCCCTC              TTTTTTTCGTTTCGC 100 137
IRT44_RS14390 NONE
IRT44_RS14395 NONE
IRT44_RS14400 NONE
IRT44_RS14405 2929838 .. 2929860 + -11.3  -4.02334   GTAAAAAGGCGCACA          GGCGGCTTGC TCCT GCA-GCCGCC           TTTCTCATGTGAATA  86 37
      spoIVA 2931634 .. 2931656 +    -7  -5.83226   GGCAGGGCAAACAGA          GGC-TCCCG GCGGGA CGGGAAGCC           TTTTTTTCTTGGATT 100 71
IRT44_RS14415 2932146 .. 2932166 +  -8.4  -5.48303   ACTCTTACATAAAAA            TCCACATT GATGA AATGTGGA            TTTTTTTCACGTTCT 100 61
        folE NONE
IRT44_RS14425 2933020 .. 2933053 + -13.3  -4.21471   TCTATCATGGAAGAA     CGCCTCTTGT-CCAAG CAG TTTGGCACGAGAGGCG     TTGTTGTTTTCGGGT 100 47
IRT44_RS14430 2933300 .. 2933342 + -18.7    -3.737   TTCCGACCATATCAA GC-AAAACGTCTCTGCTGGA ATCA TCCGGCGGAGACGTTTTTGC TTTCCTGCCAAATTG 100 32
IRT44_RS14435 NONE
        mtrB 2934378 .. 2934392 + -11.4  -5.86976   AACGTCGGAGTAAAA               GCAGGC ATA GCCTGC               TTTTTTGTTTTGTAC 100 28
IRT44_RS14445 NONE
IRT44_RS14450 NONE
IRT44_RS14455 2936624 .. 2936635 +  -5.8  -2.89793   CACAAAAGCATAGCT                TGCC AATA GGCA                 TCCTTCTGTGGATGG  52 28
        ubiA NONE
IRT44_RS14465 NONE
IRT44_RS14470 NONE
IRT44_RS14475 2940008 .. 2940018 +  -2.6   -4.4773   GCTTGCCCCACTTTC                 TTTT GAT AAAA                 TTTTCGTTGGTGTGC  62 65
         ndk 2940525 .. 2940554 + -11.5  -5.40474   ATCTAAGCGGGATAG       GGGAAAGACTCCG CATG CGGGGTCTTTTTC        TTTTTTTCGCCAAAT 100 35
IRT44_RS14485 2941523 .. 2941533 +  -2.4  -3.33261   GGAAAATGGGCTGAA                 GCGG ACG CAGC                 TTGGTATATCCCTGT  44 27
IRT44_RS14490 2941791 .. 2941814 + -13.2  -4.26188   CCGCCAATTCGATGA          CGCTTCTCCT GCGA GGGAGAAGCG           TTTTGCCTGTCTGCC 100 44
        aroC NONE
        aroB NONE
        aroH 2944759 .. 2944776 +  -9.9  -6.23317   ATTCGTACAGACCAA             TCCAGGA CTCT TCCTGGA              TTTTTTTCTTTTTCT 100 183
        trpE NONE
        trpD NONE
        trpC NONE
IRT44_RS14525 NONE
        trpB NONE
        trpA NONE
        hisC 2952032 .. 2952054 + -10.6  -4.04206   TGAAATAACGACGAG           GATGCCGG CGTTCGT CCGGCATC           TTTGTCTACACGTAC  84 33
        aroA 2954624 .. 2954638 +  -8.5  -5.14965   ACCAAGCGAGAGAAA               CCCGC CGAGC GCGGG               TTTTTTCATCGCGAT  93 60
IRT44_RS14555 2956037 .. 2956051 +  -7.1  -5.03314   AATTATGTCATATAG               CCCCA ACATC TGGGG               TTTTTTCGCAGTGGA  86 26
IRT44_RS14560 NONE
IRT44_RS14565 2957457 .. 2957474 + -11.3  -4.16146   GAACATACGGAAAAA             GACCGTC TTCG GACGGTC              TTTTGCGGCTCTTTT  91 62
IRT44_RS14570 2958479 .. 2958504 + -15.5  -4.67048   AACAAACGGCTCTGG         CAGGAAGCTGC ACTG GCGGCTTCCTG          TTTATTTTGCCGTAA 100 39
IRT44_RS14575 NONE
IRT44_RS14580 NONE
IRT44_RS14585 2960517 .. 2960533 +  -6.5  -2.64313   CAGACGAGGTTGGGG              CCGGG CCCGTCC CCCGG              ATATTCTTGACATCT  52 118
IRT44_RS14590 NONE
IRT44_RS14595 NONE
IRT44_RS14600 2962675 .. 2962695 + -11.9  -5.27335   GCCCATGCAAGAAAA            GCTGACTGA CGT TCGGTCAGC            TTTTTCTTTAACGGC 100 41
IRT44_RS14605 2963339 .. 2963374 + -13.4  -4.74103   CAAGGTCTAATCTTG    TCCTCCTTTCCATAGT CTTT ACTAGGGGAAGGAGGG     TTTTTGCATTGAGAA 100 31
IRT44_RS14610 2964204 .. 2964230 +   -11   -4.0828   CTGATGGTGTGAAAA         GAGCATCTAC CATGTGC GTAGATGCTC         TTTGCTATTTTGGAT  86 37
IRT44_RS14615 2965950 .. 2965962 +  -3.4  -3.04398   GTCCAAGTGTGCTGA                GTCT GTTCG AGAC                GTTTTGACACGAGCA  44 6
IRT44_RS14620 2966865 .. 2966881 +  -7.9  -2.72344   GGGTAAATCCTTCGC              CGAGCAC CTC GTGCACG              TCATTGACAATCACG  54 195
IRT44_RS14630 NONE
        dapB NONE
IRT44_RS14640 NONE
       bshB1 NONE
        bshA NONE
IRT44_RS14655 NONE
IRT44_RS14660 2973870 .. 2973893 +  -5.3  -5.63517   TGTTTGCATGGACAC          CCTTCTC-CC TTTTC GGCGAGAGGG          TTTTTTATTTCCGGA  95 200
        panB NONE
        panC 2975690 .. 2975702 +  -4.7  -2.60813   CACGACAGAAAATAG                GGAGG AGA CCGCC                GTGTTTCGCACGATG  44 45
IRT44_RS14675 2976144 .. 2976159 +  -6.1    -5.252   AATGAGACTACTCAC              GCCAC AAGGGG GTGGC               TTTTTTATGAAGCTG  90 83
IRT44_RS14680 NONE
        dinG 2980711 .. 2980721 +  -3.2  -3.68529   AAAATGAAGCAATAG                 TCTC GCA GGGA                 TTTAGGTGATAGAAT  52 88
IRT44_RS14690 NONE
IRT44_RS14695 NONE
IRT44_RS14700 2983837 .. 2983851 +  -7.8  -3.04269   ACGGTTTCACGCGCT               CACCTC CTC GGGGTG               TATCTGTAGTATGAC  59 275
IRT44_RS14710 NONE
IRT44_RS14715 2985190 .. 2985214 +   -13   -4.6902   GATGTACGCTCAAAA          GGCCTTTTTC CAAGT GAAAAAGGCC          TTTTTGCCGTTCTGC 100 59
IRT44_RS14720 NONE
IRT44_RS14725 2987351 .. 2987372 + -10.8  -5.59879   GCAATCGTCCAAGGA           GCTGGCGG TTTGAT CCGCCGGC            TTTTTTGTGTTTCTA 100 13
IRT44_RS14730 2990382 .. 2990404 + -12.7  -4.42748   GACAACGGAGAAGCG           GGCCCTCTC AGGCA GGGAGGGCC           TTGTTTTTGCGCTCG 100 39
        asnS 2991930 .. 2991957 + -15.6    -5.011   TGCCTGACGGCCCGA        CACCCTGTTGCC GGTG GGCGGCAGGGTG         TTTTCTTGTTTGGAT 100 69
IRT44_RS14740 2992699 .. 2992725 +  -9.5  -6.09888   CGCGATTACCGGCAA         CCGCTGTGA GCACGTAAG TCACAGCGG         TTTTTTTTGTTGGGC 100 17
IRT44_RS14745 NONE
IRT44_RS14750 2994444 .. 2994480 +  -4.5  -4.19238   TGCGCAGCATCGGCT   GAACGGATGACCGATT GGAGGG GAT-GGTCGCCCGTTC    TTTTGCGGTTGAGGA  63 24
IRT44_RS14755 NONE
IRT44_RS14760 NONE
IRT44_RS14765 NONE
IRT44_RS14770 2998924 .. 2998951 + -12.9  -4.65895   TCGGCGTGGGCAGAA        GCTGACTTTTC CGTCGA GAAAAGTCAGC         TTTTTGCGTACGGAG 100 21
        pepF 3000877 .. 3000895 + -14.6  -5.52384   AACGAATGTGCAAAA             CCGGGACA GCG TGTCCCGG             TTTTTTTGCTGCAGC 100 40
IRT44_RS14780 NONE
IRT44_RS14785 3005519 .. 3005541 + -14.9  -3.41708   ACCTAGCCAACCCAG           GAGGCCGGA AAGTG TCCGGCCTC           TTCCCTTTTGCTTGC  91 126
IRT44_RS14790 NONE
IRT44_RS14795 NONE
IRT44_RS14800 3007521 .. 3007540 +  -7.1  -5.38958   TGCAGTGAGGAAAAA            GCGTTCC GACAAA GGGACGC             TTTTTCTTTCTGGAT 100 33
IRT44_RS14805 3009426 .. 3009453 + -15.6  -3.92075   GAAAGCGAACAGTGA        TTAACGCCGGGG CATG CCCCGGCGTTGG         TTTGTCGATACGAGT 100 103
IRT44_RS14820 NONE
IRT44_RS14825 NONE
IRT44_RS14830 NONE
IRT44_RS14835 3015234 .. 3015264 + -16.3  -3.71848   TGTACGAAGAAAAAA      GGGGCT-TCCCGAA CAGG TTCGGGACAGCCCC       TTATTCATGCAAACA 100 69
IRT44_RS14845 3017146 .. 3017181 +  -7.1  -4.12902   ACTGGCGTAAGAAAA   CTCCGGTTTGTTCGTACT TTT AG-ACGAACA--CCGGAG   TTTTCGGCCTGATTG  71 189
IRT44_RS14855 NONE
IRT44_RS14860 3021010 .. 3021039 + -15.2  -3.81137   TCATAGGCAAAAAAA       CAAGCTGATCTC ATTCAC GAGATCAGCTTG        TTTGCCTGTTTACGC  95 35
IRT44_RS14890 3026554 .. 3026593 + -12.4  -5.13741   ATTCCCAAGCAGTAA CACCCTTGACCGCCTGTC TGTCAT GACAGG-G-TCAAGGGTG  TTTTTATTGGATTCC 100 54
IRT44_RS14895 3027385 .. 3027411 +    -8  -5.44119   CCTTGTCTGCATCTT         TGCGGCACCC ATACAGA GGGTGTCGTA         TTTTTTTCGCGTGCC 100 91
IRT44_RS14900 NONE
        cysT NONE
        cysW NONE
IRT44_RS14915 3031525 .. 3031545 + -14.7  -5.25803   AAGAACATGAAAAAA            CCGGTCTGC GGT GCGGACCGG            TTTTTTATGACCGTT 100 44
IRT44_RS14920 3033529 .. 3033560 +  -7.9  -5.77988   CGTTTTCCCCCTATG      CCCCCGGCTCTTC CTTTGT GAGGAGCAGGGGC       TTTTTTTGTCTGTCT 100 48
IRT44_RS14930 NONE
IRT44_RS14935 3037098 .. 3037110 +  -3.4  -3.49419   AAAGGGAGGGGATGA                GATG GCTGA CATC                GTTTTTCTGAACGGA  47 49
IRT44_RS14940 3038987 .. 3039003 +  -5.7  -4.07687   TCGCACATCGACTCC              CAGCCGT ATG GCGGCCG              TTTTGACGGCACGAT  66 291
IRT44_RS14950 3041229 .. 3041252 +  -8.1  -2.57564   CTGTTTCCCGAGGGA          GCCGTCTGC GTCGAG GTGGACGGC           GTTCTCGCCGGCTCC  58 231
IRT44_RS14965 NONE
IRT44_RS14970 3044139 .. 3044156 +  -4.1  -3.04398   CACATGCTGCATGGA             TTGCAAC ACAT GTTGCAC              GTTTTGCAACAACGA  46 41
IRT44_RS14975 NONE
IRT44_RS14980 3046828 .. 3046839 +  -2.2  -3.01712   GAAACAGTAGGGGGG                GCGT GCCA ATGC                 TGTTGAAAGACAAGG  41 31
IRT44_RS14985 NONE
IRT44_RS14990 NONE
IRT44_RS14995 NONE
IRT44_RS15000 NONE
IRT44_RS15005 NONE
IRT44_RS15010 NONE
IRT44_RS15015 3053519 .. 3053543 + -15.7  -3.66908   AAAGTGTAAGCGTTG          CCCCTACCCGG AAT CAGGGTAGGGG          TTCCTTTTGAAAAAC 100 32
IRT44_RS15020 3055429 .. 3055449 +   -14  -4.27259   CCGACCTACCCAAGA            GCCCGACG ATTAC CGTCGGGC            TTTTACGTGTGTATA 100 41
IRT44_RS15025 3055780 .. 3055802 +  -9.9  -4.61482   ACATGTAATAAATCA           GCCTTCCAT GTAAA GTGGAAGGC           TTCTTTTTTGGGAGC 100 61
IRT44_RS15030 NONE
IRT44_RS15035 NONE
IRT44_RS15040 NONE
IRT44_RS15045 3061876 .. 3061889 +  -2.3  -2.79183   GCTGGACTGGCGCAT               CAAGC GCTT GCTAG                TCTCCTAGACATACA  39 4
IRT44_RS15050 3063345 .. 3063392 + -15.1  -4.32046   CCATATGAGGCAAAT GGCCGCAGATGC-GCGTCAGT GATGGACA ACTGGCGCAGCATCT-CGGCC TTTCCTTTTTCCGAA 100 86
IRT44_RS15065 NONE
IRT44_RS15070 NONE
IRT44_RS15075 3066001 .. 3066033 + -12.2  -4.66609   TATCCCGTACAAGAC     GGTACA-TGGTACGT GTTC ACGTACCGTTGTACC      TTTTTGCATCAGCTC 100 45
IRT44_RS15080 3066947 .. 3066977 + -13.4  -5.45802   AAACGCTGCGAGAAC      GGGAGTGCAGTCG ATCCGA CGACTGC-CTCCC       TTTTTGTTTTGGGGC 100 131
IRT44_RS15085 3067570 .. 3067590 +  -3.9  -2.78384   GAAACAGAGTAGCTG            TCCAGCCAA AAA TTGGCGTGA            TATAGTAAGGAGGAG  44 29
IRT44_RS15090 3068293 .. 3068330 + -11.5  -5.58454   CGTGTGACAACCATG   CAGCCATCTCGTTGCC TGTTTGT GGCAAT-AGATGGCTG   TTTTTTTGGTGTGAA 100 50
IRT44_RS15095 3069469 .. 3069492 +   -16  -5.72254   GAGCGGACAGGCTTT          GCTCTCGCGC GGCG GCGCGGGAGC           TTTTTTCTTCTTTGC 100 42
IRT44_RS15110 NONE
IRT44_RS15115 3075082 .. 3075106 + -17.2  -4.64676   AAGTCATCATAAAAA          CGGCTGTCCG ATTGA CGGACAGCCG          TTTTCTTGCCAGTGA 100 71
IRT44_RS15125 3077962 .. 3077995 +  -6.2  -5.14965   ATGGATAGAAAAAAA    GACAACGC--GCCC-TA CCG TACGGGCAAGCGTTGTC    TTTTTTCATGCGGCT  86 33
        fdhF NONE
IRT44_RS15140 NONE
IRT44_RS15145 3082584 .. 3082622 + -13.1   -4.8048   CCCACCAGGAGCATG   CGGCCGCGTCTGCATCC AGTCC GGATGTGGGCGCGGCTA   TTTTTCGTATGAAAG 100 47
IRT44_RS15150 NONE
IRT44_RS15155 NONE
        nagZ 3088040 .. 3088064 + -13.6  -4.62069   CGGTTCGGACGAATG          GCCCGATTCG CTTGT CGAGTCGGGC          TTTTTCACGTGGAAA 100 46
IRT44_RS15165 3089565 .. 3089585 + -11.1    -4.652   AGAGGTTCCAGGAAA            CGCTTGCCG GTA TGGCAGGCG            TTTTTACAATGGTTT 100 39
IRT44_RS15170 3091268 .. 3091285 + -12.7  -5.24449   ACAGTCATAAAAAAT             GAGGGGG AGTT CCCCCTC              TTTTTTGCGTTTATC 100 43
IRT44_RS15180 3094732 .. 3094759 + -12.1  -4.93547   CGAGTCGTGTGAATA        CGCAGGTAC-CC AGTAA GGCGTACCTGCG        TTTTTCATTCGTTCC 100 68
IRT44_RS15220 3102827 .. 3102855 + -11.1  -5.15969   CGTGCACGCGAAAAA       TCCCGG-CCCTT TTGAAT AAGGGTCCGGGA        TTTTTTCAATTAACA 100 116
IRT44_RS15235 NONE
IRT44_RS15240 3107833 .. 3107859 + -13.1  -4.10566   GAATAGGAGAAAAAA        GAAGCCTCAGCC AGTC GGC-GAGGCTTC         TTTATATGGTAATAT  91 39
IRT44_RS15280 3116697 .. 3116724 + -17.8  -5.00616   CAATGGAAACAGCAA        GCCGTGCTTCTC GCAT GAGAGGCACGGC         TTTTTTGCCGGCGAC 100 49
IRT44_RS15290 3118812 .. 3118838 + -12.4  -5.27938   CCGCCCAGCAAAAAA         GCGTTTTGGC TTCTATC GCCAAAACGC         TTTTTCTTTGACGCT 100 55
IRT44_RS15370 3135901 .. 3135922 + -14.5  -3.62255   CGTCGTCCAAAAAAA           GCCACTGAC CGGC GTCAGTGGC            TTCATTGTTGTTCCC  89 18
IRT44_RS19350 NONE
IRT44_RS15460 3150710 .. 3150746 +    -8  -3.56273   TTGCAAAAGCATCTG    CGATCCCAAGCGCT AAGCGATCA ACCGCCTGGGATCG    TTATCTGGTCATGAA  67 10
IRT44_RS15470 3153634 .. 3153648 + -11.4  -3.66666   ATGAATCCACCCCCA               CCCCCA TAA TGGGGG               TTTCAACATTTTACA  82 69
IRT44_RS15495 3156521 .. 3156541 +  -6.8  -4.87626   GTGTCAGCAAAAAAC            CTGCCTTC GCTCA GGAGGCGG            TTTTTCCTCTTACCA  82 66
IRT44_RS15540 3161401 .. 3161421 +    -9  -4.36262   ACGGATCACAAAAAA           GGAGCC-GG AAAT CCAGGCTCC            TTTTCATGTACGTAT  83 77
IRT44_RS15620 3178385 .. 3178407 +   -12   -4.8048   GACAGCAACAACCGA           ACCCGGAACA GCT TGTTCCGGGC           TTTTTAATGTCCGAA 100 53
IRT44_RS15625 3180037 .. 3180065 + -13.2  -4.88795   GCGGCGCGCAAAAAA        GACTGGCAGAAC CAAAC GTCCTGCCAGTC        TTTGTTTTGTTCGAT 100 41
IRT44_RS15640 3183145 .. 3183168 +  -8.1  -2.86343   AAAATCCGCAGCCGT          TACCGCCCG CCGCCA CGTGCGGTA           TGTGCTGCTTGCGGT  54 514
IRT44_RS15665 NONE
IRT44_RS15670 3189183 .. 3189199 +  -5.7   -3.4072   CGTATCGGAGAATGA              GCGGCTC AAA GCGCTGC              TTCTCCTCGACGCTG  53 314
IRT44_RS15695 NONE
IRT44_RS15700 3196080 .. 3196116 + -20.2  -3.19513   GTCCGGACGAACAAA   CGGCGCG-ACCGTCACG CTGA CGTGACGGGACGCGCCG    TTCAATTGGGGTTGT 100 6
IRT44_RS15750 3210675 .. 3210696 +   -13  -4.24887   TGTCTACACGCTGAA           GCCGCTGC TATGCC GCAGCGGC            TTTATTGCATGTGTT 100 437
IRT44_RS15765 3213665 .. 3213694 +  -7.7  -2.69386   AGTCCCGCCAAAAAG       AAACAGCCTGCGG TCCC CCGCAGGCTGCCC        TCGATTCTATTCTTT  55 39
IRT44_RS15810 3221857 .. 3221892 + -19.8  -4.07568   GGAAAAATAAGCGGA    GCAAACGGCGCCAGTC TCTT GATCGGCGCCGTTTGC     TTTTGACGCAGCCCG 100 31
IRT44_RS15815 3222983 .. 3223007 +  -8.5  -5.24129   TCGCCCCCTACCCTT          GGGCACTCCTG CAT TGGGAGTGCCA          TTTTTTATCCGCCGC 100 297
IRT44_RS15820 3223454 .. 3223480 + -11.6  -3.90112   GACGCTGACGCCACA        CAGCCGGC-GC TTCGCT GCAGCCGGCTG         TTTCATTGCACACCG  84 84
IRT44_RS15825 3224331 .. 3224341 +  -6.8  -4.00348   GTTCTCCGTTGATTC                 GCAG CGC CTGC                 TTTCGTTCGTTGGCC  68 283
IRT44_RS15835 3224654 .. 3224673 +  -7.1  -5.00616   TGGATGACGGAAGGA            GCGGGTC GCCAGA GACCTGC             TTTTTTCACGCCCCA  86 34
IRT44_RS15840 NONE
IRT44_RS15845 3226808 .. 3226818 +  -6.8  -2.77899   CCGCCGCCTAATCTC                 GACG GTT CGTC                 TGCTTCCTGACGCGG  53 30
IRT44_RS15860 3229716 .. 3229755 +  -6.5  -5.30155   TTGAACGTGAAAAAA  GAGCAGTC-CAATCGATG AACAA TACCGATTGCGTCTGCTC  TTTTTTGCTTACTCG 100 8
IRT44_RS15880 3232688 .. 3232723 + -11.9   -4.1899   CTCACGCATCAAAAA    CAGGCAGCCCGCTTAC AGAAA GTGT-CGGGCTGCCTG    TTTTGCATCCACTCG  95 107
IRT44_RS15890 3234003 .. 3234027 +  -7.2  -3.69068   CCAGGTAAAGACGAG          GGAAGGCT GATCCGCCG AGCCTTCC          TGTTTATTACAATCA  67 16
IRT44_RS15895 3234845 .. 3234860 + -10.4  -4.28254   TTGAACAATGAAAAA              CGCCCT GTTA AGGGCG               TTTTGCGTATTGCAG  89 30
IRT44_RS15925 3241227 .. 3241259 + -13.5  -4.81249   ATACGGGTAGTAGCT      GCCATCCGTCAGG TATACAC CCTGATGGGTGGC      TTTTTCAATTTCACC 100 92
IRT44_RS15935 3243144 .. 3243165 + -12.3  -5.46629   TATATAAAGAAAAAA           GGCATGTCC ATCA GGGCATGCC            TTTTTTTACGATATT 100 41
IRT44_RS15945 3244089 .. 3244122 +  -7.4  -5.18866   CTGATTCCAACGAAA     AAGCTCTCTGCACG ACAACC TGCGCAGAGAGCTC      TTTTCTTTGTTTAGC  91 37
        lexA 3248319 .. 3248362 +  -6.9  -5.36441   TCACTAGGAAAACGA ATAGCCCGTATCTTTTCCGAC CATC GTCG-AA-AGATACGGGCTTG TTTTTTCTATGACGC 100 34
IRT44_RS15980 NONE
IRT44_RS15985 3251080 .. 3251105 +    -6  -5.60864   CTTTGTCTACACGCT         GTGCAGCCCC TGCCAT GGGGCTGCTG          TTTTTTTGCTCTCTC 100 376
IRT44_RS16065 3270174 .. 3270209 + -11.3  -5.63517   AGCCGTGACGCCGCA   CCGCTTCCGTTTCCAGG GACC CCTG-AG-CGGAAGCGG    TTTTTTCTTTCCCGG 100 33
IRT44_RS16070 3271183 .. 3271203 +  -9.7  -4.56914   ATGCACAGGGGAAAA            GCGCCTC GTAAAGA GAGGCGC            TTTTGATTTGCGTCA  90 55
IRT44_RS16080 3272700 .. 3272730 +   -14  -3.25942   CTCGCCATGAAAAAA       GCAGACCTAGTCCA GTT TGGCCCAGGTCTGC       TTGCTCTACGGACGT  86 66
IRT44_RS16100 3276492 .. 3276510 + -10.3   -4.0098   ACCCCGACAAAAAAA             CCTCTCC GCGCG GGAGAGG             TTCTTTCGCTTACGA  84 68
IRT44_RS16245 3308631 .. 3308645 +  -8.5  -5.40072   TGGCTCAATAAATTA               CGCCC TTTAT GGGCG               TTTTTTTAAACAAAA 100 30
IRT44_RS16660 NONE
IRT44_RS16665 NONE
IRT44_RS16670 3393693 .. 3393714 + -17.3  -4.91712   GGGATGCGTCACGAA           CGGAGCCGG ATGA CCGGCTCCG            TTTTTGTCGGTTGAA 100 40
IRT44_RS16755 3412577 .. 3412587 +  -2.4  -2.73124   CACAGGCGTCGTTGA                 ACCG CTC CGGA                 CTTTGGCGAATGAGA  39 360
IRT44_RS16770 NONE
IRT44_RS16775 3416370 .. 3416380 +  -2.4  -4.07568   GATGTTTGCCCCCTG                 CCCG GGC CGCG                 TTTTGGAGCGGACCC  55 93
IRT44_RS16965 3470375 .. 3470418 + -14.8  -5.40072   ACACGGATTCGGCGG TTGAGCAATGAAAAGCACCC TTTG GGGTGCTTTTCATTATTCCA TTTTTTTCAGCCCGG 100 98
IRT44_RS16970 3470819 .. 3470848 +  -8.7  -4.77173   AAACAAATACTCCTC       TTGGGAATCAG GTGAGCGG CTGGTTCCCAA        TTTGTTTTCTCCGGG  91 40
IRT44_RS16980 NONE
IRT44_RS16985 3473278 .. 3473316 + -17.5  -3.54408   AGCACATGAAAAAAG   CAGATCGCACCGTGCAG CTTCA CAACACGGTGCGATCTG   TTCGTTTCCATAGCG 100 88
IRT44_RS17040 3484841 .. 3484870 +  -6.3  -5.25803   TAAGTCAAAAAAACA       AGGCCTCTCGTCC AATC GGAAAAGAGGCCG        TTTTTTATACCCATT  90 38
IRT44_RS17050 3487762 .. 3487774 +  -5.5  -4.74285   GGTTCATATTGAATG                CCGGT CAC ATCGG                TTTTATCTTCTGGAT  79 479
IRT44_RS17090 NONE
IRT44_RS17095 3496370 .. 3496390 +  -3.9  -4.05245   GAGGATTGTAAGCGG            ACTGGCAGG TTT CTTGCTAGC            TTTCCTTGTATGGTA  59 263
IRT44_RS17105 3499206 .. 3499255 + -11.8  -4.30477   TCATTGACAGACCCT TATAAAAGCTTCATCCTCGAAT GGATAA ATTAGGTGATGAAGCTTTTATA TTTATCTATTGTTTA  95 70
IRT44_RS17125 3504923 .. 3504937 +  -2.1  -3.42985   GTCTCTGGGTGGTAA               TCAGT TCTTT GCTGA               CTTTTTCGGTGTATC  46 436
         map 3512780 .. 3512802 + -14.2  -4.33105   GCTAAATACTCCAAA           GCCCGAAGAG CTA TTCTTCGGGC           TTTTAATACTCGTTC 100 121
IRT44_RS17210 3529557 .. 3529569 +  -3.4  -3.58343   AGAATTACAGGAGAC                GTGA ACTAC TCAC                TTTCCCAATCATCCG  49 341
IRT44_RS17215 NONE
IRT44_RS17220 NONE
IRT44_RS17225 3531004 .. 3531022 +    -3  -4.07568   TTGCCCCCGCTTCAC             CGGTGAAA AAA TTGCCCCG             TTTTCCGGGGCAACG  56 167
IRT44_RS17240 3533045 .. 3533056 +  -4.4  -3.89614   AGAAGGGAGCCATTC                CGAA TAAA TTCG                 TTTGTAGGCATTCAC  59 171
IRT44_RS17250 3535836 .. 3535859 +  -8.8  -4.14739   ACGGACATGCAAAAA          GGGCAGGAAC AAGC GTTTCCGCCC           TTTTCCCGTACATCC  79 59
IRT44_RS17315 NONE
IRT44_RS17320 3549657 .. 3549667 +  -6.8  -4.46155   ACGTTCCAAAGGCGA                 GCTG CAG CAGC                 TTTTGTCCCTCTCTG  76 249
IRT44_RS17360 NONE
IRT44_RS17365 NONE
IRT44_RS17370 NONE
IRT44_RS17375 3556672 .. 3556685 +  -4.5  -3.39895   GCGTGCTTGATCGGA               TGGGT GTTT ACCCG                TTAGTTAATCGGAAA  52 8
IRT44_RS17380 3557058 .. 3557083 + -16.9  -4.14392   AGCTTTACATGGCAG         CACCGTCCTCG GTTT CGGGGACGGTG          TTTTCCACCTTCAGC 100 45
IRT44_RS17385 3558914 .. 3558959 + -12.1  -3.09866   CACACGATTAAACAA GACATCCTCTAAAGC-AGGG TTCCCTC CCCTGGCTTTAAGGGATGTC TCATTGTTCTTTGTT  77 46
IRT44_RS17390 3559992 .. 3560002 +  -2.4  -5.00846   CCATTTCTGCCAACA                 GGAC GGC GCCC                 TTTTTCTGCTCTTTG  74 238
IRT44_RS17400 3561865 .. 3561891 +  -8.9  -3.74693   CGACTTTGGACACAC        CATT-ATCCAGC ACCG GCTGGATAAATG         TTTCCTCGAATGACA  69 302
IRT44_RS17495 NONE
IRT44_RS17500 3578002 .. 3578015 +  -3.1  -4.24342   TGAAGGGGGGGATGT               CCGTGT TTG AC-CGG               TTTGTTCGTCCCCGC  59 16
IRT44_RS17505 3578989 .. 3579034 +    -7  -5.27779   GCCGCAATTGACAGA T-AAGAAGCCCTTGC-TGCTCC CGAC GGGCCATGCAAGGGCTTCGTCA TTTTTTCATCTTCAG 100 30
IRT44_RS17555 3593934 .. 3593960 + -15.2  -4.37886   AGCCTAACAAAAAAA         CCCGTTTTCCCT CAT GGGGAGAACGGG         TTTTCTCACGAATCA 100 34
        ylbJ 3605502 .. 3605524 +  -5.6  -3.32963   AATCGATCAACAGGC           CGTTGAAG GACTCCA CTTCGACG           TTGTCCAATCCGGCT  53 305
IRT44_RS17635 3606859 .. 3606885 + -10.9  -4.19624   AATGAATGACGGAAA         GCCAGCCGT ACGTAAGAA ACGGCTGGC         TTTGTATTGAAAATC  88 40
IRT44_RS17650 3609201 .. 3609222 +  -2.9  -5.44119   TGCTGGTGCCGTTTG           CAGGCAG CTATCTGA CTGCCCG            TTTTTTTGGCCTGGA  83 362
        thiC NONE
IRT44_RS17675 3615005 .. 3615036 + -19.6  -3.75738   ACTACTAAACAGCCC      GAGGCGATGAGACGG ATG CCG-CTCATCGCCTC      TTCTTCGTCCTAATG 100 33
IRT44_RS17680 3616136 .. 3616157 +  -2.2  -3.57144   TGCGACTGCTTGTGT           TTCAGGTG ATTGAC CGCCTGCA            TTTCCAGATAGGAGC  47 76
        ligD 3621558 .. 3621570 +  -4.7  -2.87541   GATCACGTTGAGAAC                GCGGC CTC GCCCC                TCCTTGCTTCTGCCT  47 39
         lgt 3622521 .. 3622560 +  -2.3  -4.17316   TTAAACGTAGACGTT GGAACCCCT-ATG-GTTGA CCGA TCAATACGTTAGGGGTTCA  TTCTTTTCAAACAGT  57 85
IRT44_RS17775 NONE
IRT44_RS17780 3635331 .. 3635362 +  -8.8  -3.01712   TTTAGTCTGGGGCGC      TCATTCCCTGTCCA ATGT TGCACAGAGAATGA       TGTTGGGAAGGAAAG  63 36
IRT44_RS17785 3636040 .. 3636061 +   -13  -4.05875   AGTACGTCCTTGTAA           CCCCCTCC GCAGTG GGAGGGGG            TTTCCCTTTTTTGAA  91 50
IRT44_RS17790 3636739 .. 3636751 +  -6.2  -3.40163   CAAGTCGGCGGAGAA                GCCG CTGAT CGGC                TTGATCTTCATGATC  56 328
IRT44_RS17810 3640613 .. 3640629 +  -3.6  -2.85459   TTTCCCGAAAACGAC              CGCCTG CAGCT CAAGCG              ATTCTGTTCTCGCTC  44 55
IRT44_RS17815 NONE
IRT44_RS17820 3642378 .. 3642406 + -11.8  -3.48269   CTTTGACATAACAAA        CAACCCGGAC AAATATGCA GTCCGGGTTG        TTGCTGTTTGATGGA  80 79
        lepB 3644761 .. 3644801 +  -6.1  -4.65895   TCTACTGGCCGTTGA ACAGCATC-CGCCTGCCC AAGTAA GTGCAGCCGGGATGCTGG  TTTTTGCATGAGAAC  76 3
IRT44_RS17845 3645319 .. 3645362 + -16.1  -4.19735   CTGTCGCGAACAGCA CACGGCTCTCCGCGT-TTCC CGTCC GGATTGCGCGGAGAGCTGTG TTTCGTTTTGGAACA 100 73
IRT44_RS17885 3654277 .. 3654322 + -16.4  -4.25283   TACCGCCAGCGTGAG C-TGATCGGC-CGGGACGTCCAG AAC CTGGATG-CCCGCGCCGATCATG TTTTGCTGAAACGCT 100 49
IRT44_RS17915 3660304 .. 3660338 +  -5.7  -4.08767   CGTTGCCCATTCTCC    GCTGCAAATCGCGGTT GGAG AGCAGCG-TGTGCAGC     TTTTCGGCAAATGCC  64 411
IRT44_RS17940 NONE
IRT44_RS17945 3667420 .. 3667446 +  -8.7  -3.29325   CCGCAAATGCAAAAA         GCCATCCGCTT CCTAA ACGTGGATGGC         TCTTCATTATGCCCA  67 76
IRT44_RS17985 3672209 .. 3672236 +  -5.4  -4.20696   TCATCCGAGTACAGG        GACTGACGCCGG GAAG CAGCCGTCCGTC         TTTTCCCCTTCCTGA  66 20
IRT44_RS17990 3676149 .. 3676172 + -10.3  -3.21099   GGGCCAATTGCACAA          CCCACCTGT CCGTTT GCAGGTGGG           TTGCTGCTGCAAGGC  73 134
        rpmB 3683385 .. 3683399 +  -7.1   -5.2696   ACAACGCGAAAAAAA               GCACC CGCGA GGTGC               TTTTTTGCATTTTCC 100 52
IRT44_RS18055 3688864 .. 3688877 +  -9.5  -3.33265   GCCGATCTTTCACCA               GCCGG GTGC CCGGC                TTACGTTTCTCGACT  70 329
IRT44_RS18135 3706290 .. 3706310 +  -8.3  -3.13403   GAAAGGAGGGTTCGT            GCTTGAACA TCC TGCTCAAGC            TCTTGGTAAACGGCA  62 58
IRT44_RS18140 NONE
IRT44_RS18145 3707121 .. 3707142 + -10.1   -5.1861   GATCGCGCAAAAAAA           CCTGGAACG ATAA CGTCCCAGG            TTTTTTCGTGGTCGA 100 64
IRT44_RS18155 3708250 .. 3708263 +  -5.2  -3.91897   TCCTGTTCGATTTCA               GCCG CATCCA CGGC                TTTGTAGATCAAGCC  61 261
IRT44_RS18190 3712183 .. 3712206 + -10.3  -2.84586   GACAAAGGGAACATG          C-GGCTCCGC AATGG GCGGAGCCAG          TCATTCCCTTTTGCC  69 53
IRT44_RS18200 3713253 .. 3713272 +    -2  -2.78384   CACCCCCAGAATACG            CCGATGGC CAGC GCCATGAG             TGTAATCCACACACC  39 159
IRT44_RS18210 3715210 .. 3715228 +    -3   -2.6933   GGCTTCTTTAAGAAA             AGACAGCG AAT CGCTTTCC             CCTTTTTCTGCAAAA  40 41
IRT44_RS18215 3715775 .. 3715806 +    -8  -5.44721   GAACCTGACAACGAT      GAGCAG-AACCTCTG ACG CCGAGGTCACTGCTC      TTTTTTTGCCCTCGT 100 33
IRT44_RS18240 NONE
IRT44_RS18245 3723022 .. 3723049 + -11.3  -3.05963   CTGACAACAAAAACA        CCCCCTCCG AATCATCTGC CGGAGGGGG         TGTTAGCATGACCAT  74 41
IRT44_RS18410 3761681 .. 3761711 +  -2.5  -5.55664   AGGATATGCAAAAAA      CGCGCTTT-CCGCT GCTT GGCGAAAAAACGCG       TTTTTTTCGTGCTAG  84 386
IRT44_RS18430 NONE
IRT44_RS18435 3770235 .. 3770264 + -16.5  -4.43272   TTTGCGACAACGTGA       CAGGCATCCCCCA ACCG TGGGCGATGCCTG        TTTTAGCTTTTGCCT 100 26
IRT44_RS18530 3788287 .. 3788343 + -10.4  -2.96157   CCCAAGTAGAGTGCA CCCCTTAAAGTAGACATTGGAAAAACCC CTT GGGATAA-CCGATGT-TACTTTAAGGGG TGAATTTTTTATGGC  70 107
IRT44_RS18535 NONE
IRT44_RS18540 3789757 .. 3789773 +  -5.7  -4.99056   TGCTGTTGCGTACGA              CGGGCTG CAG CCGCCTG              TTTTTGGTTGTCTTC  83 269
IRT44_RS18685 3821434 .. 3821453 +  -9.3   -5.4505   CACGCGTCAAAAAAA            GAAGCGG TTTTGT CCGCTTC             TTTTTTGTTGGCACG 100 57
IRT44_RS18705 3824869 .. 3824882 +  -4.5  -3.53012   GTGGCGCGTATCCCT               CGTTG ACGT CGACG                TTTCGCCCAACGGCG  54 20
IRT44_RS18710 3825360 .. 3825378 +  -8.9  -5.99154   GATCATGTAAAAAAA             GATGCTC TGGGT GAGCATC             TTTTTTTATTTCCTG 100 31
IRT44_RS18720 3827781 .. 3827799 +  -6.6  -4.99435   TTGGCAGATGAAAAA             GCCAGCGT TTT GCACTGGC             TTTTTCCTTATTCGG  86 96
IRT44_RS18730 3829146 .. 3829157 +  -5.8   -4.7033   CCTCGTCAGTTTCTT                GGTC CTCT GACC                 TTTTGTCTTGGCTTG  76 103
IRT44_RS18740 3830242 .. 3830298 + -10.4  -2.96157   GGCTCTTAGAGTGCA CCCCTTAAAGTAGACATTGGAAAAACCC CTT GGGATAA-CCGATGT-TACTTTAAGGGG TGAATTTTTTATGGC  70 54
IRT44_RS18745 NONE
IRT44_RS18750 3831457 .. 3831478 +  -3.5  -5.14477   GAGTACAGGCGTCAG           CATGCGGCC TAAC GGCCGGGGG            TTTTTTAAGTGTCTA  78 482
IRT44_RS18765 3834015 .. 3834051 + -20.4   -4.0162   TCGTCCGAAACAATA   CAGGCATTTTCC-GGGC TTAC GCCCAGGAAAATGCCTG    TTTGTCGTCTGCCAC 100 44
IRT44_RS18785 3837727 .. 3837739 +  -6.2   -3.7941   TTTTTCATCGTCATC                GCCG TTGAC CGGC                TTGTTGTGCGGGATG  64 131
IRT44_RS18810 3841089 .. 3841100 +  -5.8   -5.1166   TTACGCCTGTGCCTG                CGCT TCCC AGCG                 TTTTTGCTTTTCGTA  86 122
IRT44_RS18845 3847450 .. 3847490 +  -6.1  -5.35354   AGAATATATGCAAAA  GAACAGGTCCGCTTTCTAT CGA AAATGAGGCGTGCCTGTTC  TTTTTTCATTGTCTC  90 49
IRT44_RS18855 3850175 .. 3850202 + -13.5  -5.19212   CTAAAGACAGTGACA        GCCGCTGC-CTC ATCTC GAGTGCAGCGGC        TTTTTTGATAATCAT 100 37
IRT44_RS18885 3855261 .. 3855283 +  -9.1  -4.28548   CCGGACGACAAAAAA           AGGCTCTCC CGAGT GGAGAGCCG           TTTTAATGCGTACGT  83 45
IRT44_RS18915 3860809 .. 3860820 +  -5.8  -2.68823   CGCATACGTGATACA                CTGG CGGT CCAG                 ATTCTATCAAGAGGA  50 108
IRT44_RS18920 3861433 .. 3861471 + -10.3  -3.73647   CCTGGCAGCGGGAAA  GCCGGAG-CGCACGGGACA TCC TG-CCCGTCAGGCTCCGGC  TTCTTCCTGCCTCAG  80 61
IRT44_RS18940 3863358 .. 3863390 +  -2.7  -4.20531   AGATTTGACGAATAA     CCCCTCCACTGGTA CAACGA TACCAA-GGAGGGA      TTTTCCATGCATGTA  59 82
IRT44_RS18945 3864221 .. 3864256 + -16.2  -4.05788   CGTCCAAACAAACAA    CCCGCCTGC-TCTGCCG CAA TGGCACAAGCAGGCGGG    TTTCATTTGAGCCGG 100 64
IRT44_RS18965 3868450 .. 3868472 + -11.3  -5.14563   CCCACGATATCGAAA           CGCTTCTCC CCGCC GGAGAGGCG           TTTTTTCATGGGACG 100 66
        pdxK 3869409 .. 3869442 + -15.4  -5.80817   ACTGACAGCAAAAAA     CTCCAATCCGTCCG CTGCTT CGGACAGATTGGAG      TTTTTTTGTGTTACG 100 36
IRT44_RS18980 3871545 .. 3871563 + -13.2  -4.21194   AAAGGATACGGCAAG             GCGCTGAA CGG TTCAGCGC             TTTTGCCTCATGCAC 100 42
        istA NONE
        istB 3891610 .. 3891620 +    -4  -3.21695   AAAGGCCATCGTAAA                 TTGT TGA ACAA                 TTCCGTTCGTCATAA  48 361
IRT44_RS19245 3923978 .. 3923992 +  -4.2  -3.09671   CCGTCTTCCTTTCCT               GGCG AGACGAG CGCC               TCTTCGAATTCCGCT  45 68
IRT44_RS19255 NONE
IRT44_RS19260 3925338 .. 3925363 + -12.6  -4.00124   AAGTGTAAAAAACAA         CCCCGCAGTCC TCATC GGAC-GCGGGG         TTTCATTGTGCAGTG  91 39
IRT44_RS19270 3926706 .. 3926717 +  -5.8  -2.60075   GATCGCTCACTTTTC                GGCT CCAC AGCC                 ATTGATTGGCGGCGA  50 39
IRT44_RS19285 3930229 .. 3930257 +   -14  -3.92542   CTTTGTCTACACGCT       GAAGTGTCCCCTG CCCG CAGGGG-CACTTC        TTCTTTCCGGCTGCC  93 354
IRT44_RS19290 3931077 .. 3931107 +  -2.4  -4.09511   CCCGCCAGCTTCCCG       CGAGCAGGCG CGGGAACTGAT CGCCGGCACG       TTTTCACGGCATCTT  56 437
IRT44_RS19295 3930480 .. 3930490 -  -2.4  -4.18018   GCTCGCCAGGGAAAA                 GTGC GCT GCCC                 CGTCTGCGGTTCGCA  59 213
IRT44_RS19280 NONE
IRT44_RS19275 3926391 .. 3926403 -  -3.4  -4.38712   CTTATGTCGACAAAA                TGCT CCGGC AGCA                AGGATTTCACCGTTC  64 305
IRT44_RS19265 3925335 .. 3925366 - -10.9  -5.11937   AATAAGTGTAAAAAA      CAACCCCGCAGTCC TCATC GGAC-GCGGGGTTT      CATTGTGCAGTGTTA 100 38
IRT44_RS19250 3923840 .. 3923850 -  -2.4  -4.87133   ATCCTGCAAACAAAA                 GGGG TCA CCCT                 GGCTTATGAGACCTT  70 113
IRT44_RS19240 3922242 .. 3922265 -  -2.4  -4.80167   GAGGAAAAATCAAAA          TTCCTGTAAA AAAT TTTACCGGCA           TAGAAAGAACCATTC  68 210
IRT44_RS19235 NONE
IRT44_RS19230 3921949 .. 3921965 -  -8.7  -5.49569   CACCAATAGAAAAAA              GCCTTGA TTA CCAAGGC              TTTTGTCATTTCTGT 100 43
        ltrA 3919959 .. 3919977 -  -4.5  -4.63218   CGCTTCTCAACAAAA             GTCAGGG AAACA CGCTGAC             AGCGGTATTATTATT  70 165
IRT44_RS19220 3917215 .. 3917253 -  -9.6  -4.92314   ATGAATGGATAAAAA   GCGTGTAGACCTTGTACT TTC AGTACTTTATCTACACGC   TTTACCATTTTTGTA 100 96
IRT44_RS19215 NONE
IRT44_RS19210 NONE
IRT44_RS19205 NONE
IRT44_RS19200 3909364 .. 3909376 -  -7.7  -4.44046   TTTACCGCAAAGAAA                GACAG AAA CTGTC                AGAGAACTTAAGTAC  79 105
IRT44_RS19195 3908113 .. 3908132 -  -4.9  -5.67063   CGGACCATAAAAAAA            CCCCCTG CGTTCC CAGGGGT             TACAGTCTGTAGACA  91 343
IRT44_RS19190 NONE
IRT44_RS19185 3905696 .. 3905715 -  -3.6  -4.26076   TCACTCTCAGCAAAA            CTCATTGT AAAG ATAATGAG             ACTCGTTGTCAATTA  61 53
IRT44_RS19180 NONE
IRT44_RS19175 NONE
IRT44_RS19170 NONE
IRT44_RS19165 NONE
IRT44_RS19160 NONE
IRT44_RS19155 NONE
IRT44_RS19150 3898066 .. 3898083 -  -9.9  -5.30189   GACAACAGCAAAAAA             CCCTTGA TTTC TCAAGGG              TTTGACGAGCGACAA 100 46
IRT44_RS19145 NONE
IRT44_RS19140 NONE
IRT44_RS19135 3894526 .. 3894548 -  -2.7  -2.71712   CGCCTCCTGTCAAAC           TCTCACGTT TTTCC AAGGCGAGA           AAAGGATGATGGTGG  41 109
IRT44_RS19130 3894036 .. 3894076 -  -7.8  -5.95539   CTGTAAACAAAAAAA CATCAGGG-ATTTCTCT GATTCCAA AGAGAATTACCCTGATG  TTTCTGCTCTTGTCC 100 61
IRT44_RS19125 3893273 .. 3893283 -  -5.4   -3.2614   TATTTTGGATATCAA                 GAGT AAC ACTC                 CTTGGAGAAATGCTA  53 93
IRT44_RS19120 3892387 .. 3892405 -  -8.8  -3.88029   ACGTGAGACAAAATA             GCCGCC AGTAAAA GGCGGC             TTTTCTTATGACATA  75 68
IRT44_RS19105 NONE
IRT44_RS19100 3887784 .. 3887824 -  -5.6  -4.91977   TACGAAAAGAGAAAA GCCGAACAGGTGATCAGG TAAAACC CCTAA-CA-CTGCTCGGC CTCTTGGTCAACTAT  79 59
IRT44_RS19095 3886269 .. 3886326 - -11.4  -5.08015   AATTTAAAAAAGAAA GAAAAAGACGCGCAGCCATCCCCTTCAC GTGT GTGAAGAGG--GGCAGAGCGTCTGTCTC CGGGCAGCATCGCGA 100 85
IRT44_RS19090 NONE
IRT44_RS19085 NONE
IRT44_RS19080 NONE
        gguA NONE
IRT44_RS19070 NONE
        iolD NONE
        iolE NONE
        iolB NONE
        iolC 3875279 .. 3875294 -    -6  -4.62471   CGGAAGGCGCAAAAA              GCCGCG ACTT CGCGGA               AAAAACCGCCCTTTT  76 186
IRT44_RS19045 3874235 .. 3874278 - -14.7  -5.00616   TTTGCCGTGAAAAAA CCCCTCGCGGCAA-ACAGCG ATACG CGCTGTATTACCAGGAGGGG TTCGCGTTGGATGGA 100 83
        thiM 3873222 .. 3873251 -  -9.9  -3.79481   GAAAGGCAACGCAAA       GGCCCCCTCGCTC ACAA GCACAAAGGGGCC        TTTTTCGCCCAACAG  77 92
IRT44_RS19035 NONE
IRT44_RS19030 3872791 .. 3872822 -    -8  -3.06796   TCCCAGCTGAGCTAA      GCCTCCGCTC-CGTC CGC AAAGTGAACGGAGGC      TTCTCAGCGAATCCG  62 87
IRT44_RS19025 NONE
IRT44_RS19020 NONE
IRT44_RS19015 NONE
IRT44_RS19010 NONE
IRT44_RS19005 NONE
IRT44_RS19000 NONE
IRT44_RS18995 NONE
IRT44_RS18990 NONE
IRT44_RS18985 3871781 .. 3871817 - -15.8  -5.10154   ATTCAAAATCAAAAA    GCCCGGCGCTTGCAGC GGTTT GCTGCACTCACCGGGC    TGTGTGAACATAGAT 100 40
        rarD 3869409 .. 3869442 - -17.6  -5.22312   ACTGACAGCAAAAAA     CTCCAATCCGTCCG CTGCTT CGGACAGATTGGAG      TTTTTTTGTGTTACG 100 36
IRT44_RS18960 NONE
IRT44_RS18955 NONE
IRT44_RS18950 3864218 .. 3864259 -   -16  -4.41348   GGGCGTCCAAACAAA CAACCCGCCTGCTC-TGCC GCAAT GGCACAAGCAGGCGGGTTT CATTTGAGCCGGAGG 100 59
IRT44_RS18935 NONE
IRT44_RS18930 NONE
IRT44_RS18925 3861433 .. 3861471 - -12.5  -3.57144   CCTGGCAGCGGGAAA  GCCGGAGCGC-ACGGGACA TCC TG-CCCGTCAGGCTCCGGC  TTCTTCCTGCCTCAG  83 14
        dapD NONE
IRT44_RS18905 NONE
IRT44_RS18900 3856577 .. 3856595 - -10.3  -5.58522   CAGATAAAAGAAAAA             GCGACTC GCGTG GAGTCGC             TTCAGCATGCAGACA 100 190
IRT44_RS18895 3855771 .. 3855786 -  -3.3  -2.51966   GGAAACGCGACCAAG              CCAAT TTTCTC ATTGG               GCTATCGTCCGACGG  40 27
IRT44_RS18890 3855262 .. 3855282 - -12.6  -5.67063   CGGACGACAAAAAAA            GGCTCTCC CGAGT GGAGAGCC            GTTTTAATGCGTACG 100 45
IRT44_RS18880 3854007 .. 3854026 -  -2.8  -2.95308   TATATCAAAAAAAGC            GGCAGA TTTCCACC CCTGCC             CTCGCAGCAGCCTCG  42 103
IRT44_RS18875 3853596 .. 3853620 - -20.1   -5.0916   TCCCCAAGACAAAAA          CGGGCAGAAGG AAT CCTTCTGCCCG          ATGTCAGTACTGGTT 100 29
IRT44_RS18870 3852670 .. 3852684 -  -4.3  -2.76671   ATCAGCCAAAAGTGA               CATCA AAATG TGATG               GTACTTTTATATTAA  45 109
IRT44_RS18865 3852451 .. 3852475 - -11.5  -5.78622   GGATGTCAAAAAAAA          TCAGGCGCT ATCAACA AGCGCCTGA          CGAACTATTTGCATG 100 41
IRT44_RS18860 3850221 .. 3850261 - -16.9   -4.1021   TTTGATAATCATAAA  CAGGCAGGCCAGGAGGG AACCACG CCCTCGCAGCCTGCCTG  TTTTGTCTGAAAAAT 100 40
IRT44_RS18850 3847277 .. 3847291 -  -5.6  -5.00616   GCTGCCGTGAAAAAA               GCGGAG ATT CTCTGC               GGCATTACCATCGAC  83 276
IRT44_RS18840 3845999 .. 3846025 -  -5.9  -5.58454   CCGAGACCAAAAAAA         GCGACACCT ACCATGACG AGATGTCGC         TTTTTTTATTCTCTA 100 88
IRT44_RS18835 NONE
IRT44_RS18830 3844464 .. 3844474 -  -4.6  -3.34013   GATTTGGGTAATGAA                 GGCG GAT CACC                 TACTTTTTGTAATTA  52 198
IRT44_RS18825 3843689 .. 3843718 - -18.1  -4.45077   GAAAAACCAGGAAAA       CAAAAAATGGGCG GATG CGCCCATTTTTTG        CTTGCTCTTATGCTT 100 33
        speD 3843044 .. 3843067 - -16.8  -4.20084   AGGATTGACGTAAAA          GAGGTGCGGA TGAT TCCGCACCTC           TTGGCTTTGCTGGCG 100 45
        typA 3841032 .. 3841059 -   -12  -5.43553   ACGGAAAAAAGAAAA        GCCGTGCTGCCT GTAT AGACAGTACGGC         TTCTTCCGTTGTCGT 100 40
IRT44_RS18805 NONE
IRT44_RS18800 NONE
IRT44_RS18795 3839054 .. 3839076 - -12.7  -5.75478   AACGACACAAAAAAA           CCCCGCCTC TGGCG GAGACGGGG           ATAATGCCGAAGTCC 100 78
IRT44_RS18790 3837439 .. 3837489 -  -7.7  -3.10935   ATTCAAAATTATACA GCCCCGAGCAAG--CTGCTGTGGA TCAACT TCCTC-GCAGGTCTTGCCCGAGGC CTGGGATTGACGATC  57 161
IRT44_RS18780 3836426 .. 3836450 - -13.7  -5.52986   AGGGCATTAAAAAAA          GCCCTCTTTTC TCT GAAAAGAAGGC          TTTGTTTACGCGTAC 100 255
IRT44_RS18775 NONE
IRT44_RS18770 3834010 .. 3834055 - -19.4  -3.54741   GACCATCGTCCGAAA CAATACAGGCATTTTCC-GGGC TTAC GCCCAGGAAAATGCCTGT-TTG TCGTCTGCCACCTGC 100 1
IRT44_RS18760 3831606 .. 3831624 - -11.7  -5.18355   CTGAAAAATGAAAAA             CCGCTCC AACAA GGAGCGG             TTGTGTCGAGCCCTT 100 262
IRT44_RS18735 3829092 .. 3829126 - -14.5  -5.15634   CATCTCATGAAAAAA    CCATGCGGCTTTCCAC TCGA GTG-AAAGCCGCATGA     ATCGCCTCGTCAGTT 100 35
IRT44_RS18725 3827781 .. 3827799 -  -8.1   -4.8048   TTGGCAGATGAAAAA             GCCAGCG TTTTG CACTGGC             TTTTTCCTTATTCGG  87 85
IRT44_RS18715 3825360 .. 3825378 -  -8.9  -5.48825   GATCATGTAAAAAAA             GATGCTC TGGGT GAGCATC             TTTTTTTATTTCCTG 100 46
IRT44_RS18700 3823183 .. 3823203 - -13.3  -5.37593   CGCCAAACGAAAAAA            GAGGAGGGA TAT CCCCTCCTC            GCAGACAGAAGACAA 100 395
IRT44_RS18695 3822183 .. 3822201 -  -2.4  -2.57564   CTACTCTGGTAGAAT             CGCTTTCT ACT AGAAAAAG             TATGTCCAGACACAA  39 78
IRT44_RS18690 3821434 .. 3821453 -  -9.3  -5.41143   CACGCGTCAAAAAAA            GAAGCGG TTTTGT CCGCTTC             TTTTTTGTTGGCACG 100 50
IRT44_RS18680 NONE
IRT44_RS18675 3819028 .. 3819043 -  -5.4  -2.58544   CCCTACTTCTACAAT              CTGCAC CTGC ATGCAG               GCCACCTGCCTTTCC  47 74
IRT44_RS18670 NONE
IRT44_RS18665 NONE
IRT44_RS18660 3815747 .. 3815775 - -11.8  -7.14698   AAAAAAAAAAAAAAA        CAGACTGCCTCC TCACC GAAGACAGTCTG        TCTGGCACATCTACA 100 36
IRT44_RS18655 NONE
IRT44_RS18650 NONE
IRT44_RS18645 3813444 .. 3813472 -  -5.3  -5.40072   CTTTCCGTAAAAAAA        CAAGACAACCC GCTGAAT GGGTTGTCTAA        GTGCAGTCAAATGTG  91 46
        bshC 3811495 .. 3811506 -  -4.4  -3.53761   CAATGCTTTCCGAAA                CCAT GTTC ATGG                 GTTTGACGAACCTCC  54 276
IRT44_RS18635 3810181 .. 3810200 - -10.8  -6.26417   TATTATAAAAAAAAA            TCCTGCTT TTGT AAGCAGGA             TTTTTTCGCTGATTT 100 70
        mraZ 3809571 .. 3809585 -    -5  -3.81951   GGTCACATGATGAAA               CGACAA AGG TTGTCA               CTCCCGATTCAAACG  61 103
        rsmH NONE
        ftsL 3808048 .. 3808073 -    -9  -5.42198   CGGCAAAAAAGAAAA         GCTTCTCCGA TCCCTG TCGGTGAAGC          TGATGTCAGCATGTT 100 76
IRT44_RS18615 3805552 .. 3805567 -  -2.5  -3.59262   TTGGATACCCGCAAA              GCGAG TCCCCC CTCAC               GGAGTAGGTTGTCTC  47 76
IRT44_RS18610 3803564 .. 3803602 - -13.2  -4.38712   GCGATTTCTACAAAA  CGCGGCGGGTGAGGCTT TCGATC AAGCCTC-CCCACCCCG   CTTCCGAAATCTCAT 100 48
IRT44_RS18605 NONE
        mraY NONE
        murD NONE
       spoVE 3798385 .. 3798404 -  -6.3  -2.76281   CGATATACAAAAAGG            CCGCCTG CGGTTC CTGGCGG             GACACTTCTTTCGCC  51 116
        murB NONE
        murA 3795051 .. 3795070 - -12.2   -3.8679   TACAAAACAGGGAAA            GCGGCATA TCCT TATGCCGC             TTGTCACTCTACAAC  86 49
IRT44_RS18570 NONE
IRT44_RS18565 NONE
IRT44_RS18560 NONE
IRT44_RS18555 3792239 .. 3792249 -  -2.6  -3.21099   TTTTTTCATCATGAA                 TTTT TGT AAAA                 ATATGACCTTCCTCC  44 52
        ftsA 3790782 .. 3790803 -  -3.6  -3.14132   GCTTTGGCTGATGAA           GCCTGCGG GGAATG CGGCAGAC            GGCCGTATTAGTTGG  46 108
        ftsZ 3789474 .. 3789502 - -14.6  -4.17906   AATCAAATTAAATAA        GCTGACGCCAGT CGAGT ACAGGCGTCAGC        ATGCGGCCTAACGGC 100 111
IRT44_RS18525 NONE
IRT44_RS18520 NONE
IRT44_RS18515 3784629 .. 3784640 -  -2.2  -2.71144   CACCGCCTGTAACCA                GCAC GATC ATGC                 CCATTTCCTCCTCTC  39 67
        cobU 3784021 .. 3784060 -   -13  -5.08255   ACCCCTAAAATAAAA  CGAAAGGGCTGTCGT-CAC GAT GTGTACGACAGCCCTTTAT  TGTTTTGATCGTCAC 100 37
     spoIIGA NONE
        sigE 3782064 .. 3782079 - -10.4  -4.93877   CCGGATGAAAGAAAA              CTCGGC GAAG GCCGAG               CTTTGCGGCGAGAGC 100 133
        sigG 3781157 .. 3781182 -  -7.6  -5.07523   TATACAGAAACAAAA         GCCTCCGACGC TGATG GCAT-GGAGGC         TGCTGATGATAAACC  91 43
IRT44_RS18490 3780669 .. 3780688 -  -7.9  -5.09259   CAGCCCAAAAGAAAA            GAAAGGC TCTCTC GCCTTTC             TTACGCCCGGTATTC  91 26
        pgeF NONE
IRT44_RS18480 NONE
        sepF NONE
IRT44_RS18470 3778335 .. 3778345 -  -6.8  -2.63715   ACGCACCTCACAGCA                 GCAG TTG CTGC                 AGGATCGCATTCAGG  52 7
IRT44_RS18465 NONE
IRT44_RS18460 3776610 .. 3776643 - -17.5  -5.38054   TGGTATAAATAAAAA     GCCTTCCCCCATCCC AAAA GGGACGAGAGAAGGC      TCCCGTGGTACCACC 100 333
        ileS 3773725 .. 3773760 - -10.5  -5.60993   CTGTGGACAAAAAAA    CAGCCCTGCCT-CACC GCAGG GGCACAGGCAGAGCTG    TACTGTTTGTCAGAT 100 53
IRT44_RS18450 NONE
IRT44_RS18445 NONE
IRT44_RS18440 3770128 .. 3770141 -  -2.4  -4.15044   TGTTGTTCGAACAAA               TACC GCTCCA GGTA                CGGAATGATCCCCGC  59 151
IRT44_RS18425 3766998 .. 3767023 - -16.2   -5.4505   TGGGCCAACAAAAAA         CCCCTCCTCG GCACTT CGAGGAGGGG          GTGCGGGCAGCCAGC 100 78
IRT44_RS18415 3761681 .. 3761711 -  -6.2  -5.13473   AGGATATGCAAAAAA      CGCG-CTTTCCGC TGCTTG GCGAAAAAACGCG       TTTTTTTCGTGCTAG  86 37
IRT44_RS19360 3761346 .. 3761389 - -16.2  -3.10531   GCAAAAGCAGACAGA TCCATGCAAAGGGAGAATTC GGGG GCATTCTCCCCTTGCATGCA CTCCGCTATGGCTGG 100 146
IRT44_RS18405 3758808 .. 3758832 -  -4.2   -4.2131   ATCTACGAAAAAAGA         GGGGCCTCGGT TTCA ACCG-GACTCC          TTTCGTTTGCGCATG  63 13
IRT44_RS18400 3758046 .. 3758070 -  -6.3  -5.04175   GGAATCAGAGAAAAA          GGGGAACCGCC TGG AGCGGTTTACC          CCTCGTATTTTTTCA  81 21
IRT44_RS18395 NONE
IRT44_RS18390 3757009 .. 3757022 -  -2.3  -3.71848   CGCTGGCACCAACAA               GATCG TGAC CGCTC                GAAACAACCGCTGTG  50 57
IRT44_RS18380 NONE
IRT44_RS18375 NONE
IRT44_RS18370 3754735 .. 3754750 -    -9  -5.80364   AGGGCAAGAAAAAAA              CCACCT GTAC AGGTGG               ATCAGACAGTAAATC 100 39
IRT44_RS18365 3753387 .. 3753399 -  -6.2  -3.96291   TACAAAGGGGAGAAA                CGCG TGAGT CGCG                GCGCACGTAATCAGC  64 480
IRT44_RS18355 NONE
IRT44_RS18350 3748561 .. 3748572 -  -4.4  -3.59979   CCTTCCGATCTGAAA                CTTC ACGA GAAG                 GTTCCCGAAAACAAG  54 46
IRT44_RS18345 NONE
IRT44_RS18340 3745022 .. 3745059 - -12.7  -4.24123   TGAACAACGGCAAAA   GCCGCCTCCCCG-CCG CATGGGC CAGTCTGGGAGGCGGC   CTCTTTTATTTTTCC 100 90
IRT44_RS18335 3744239 .. 3744261 - -11.3  -4.14764   TGTGAAACAATGAAA           CGATCCACG CTCCC CGTGGACCG           GTGCGTCTTCCCCTG  91 42
        lspA NONE
IRT44_RS18325 3742643 .. 3742673 - -10.4  -5.45652   ATCGGCAACAAAAAA       CGCCAGGGAACATC TGT GGTACTCCCTAGCG       TTTAATTCGCTGAAC 100 61
IRT44_RS18320 3740962 .. 3740987 - -16.3  -5.24129   CTGTGGCACAAAAAA         GGCTTCTTGTC AGGC GACAAGAAGCC          ACTGGCCGATGACAG 100 165
        pyrR 3740255 .. 3740278 -   -14   -5.4505   TCGGCCAACAAAAAA          CCTCTTTGTG CAGG CACAAAGAGG           CATACTCCTTCCATC 100 120
IRT44_RS18310 3738704 .. 3738746 -  -9.1  -5.63504   AATTGGATAAAAAAA GCTTCTTGCCGTCTTTGCC GTGAA GGCAGGTAAGGCAAGAAGC TCGTGATTTGCTTCC 100 114
IRT44_RS18305 NONE
IRT44_RS18300 NONE
        carA NONE
        carB NONE
        pyrF NONE
        pyrE 3730593 .. 3730609 - -11.5  -5.92399   GAACAAAACAAAAAA              CGCCCCG AAA CAGGGCG              TTGGTAAAGTACAGT 100 96
IRT44_RS18275 3729536 .. 3729556 -  -7.6  -6.23317   AGAAAAATAAAAAAA            CCTTCTCC GACAA GAAGAAGG            TCTGCGTCCATATCA 100 371
IRT44_RS18270 3727974 .. 3727991 -  -2.5  -3.63148   ATCATGCCAAAAAAT             CCCGGCG AATG CGATGGG              GAGTTGGATGCTAGT  47 41
IRT44_RS18265 3727235 .. 3727292 -  -8.8  -2.71413   AGAAAACAGAAAATC CACCTATTTATCCAC-G-GTTTAAGTCC ACAG GAACTTAAACACAGGGAATATATAGGTG GATCTCCTGATCTCA  62 102
IRT44_RS18260 3726444 .. 3726454 -  -3.2  -2.78813   CGCTATCCGAACAAG                 GCCT TGA AGAC                 GAGCGCTCCCGCCGT  41 2
        glpK 3724764 .. 3724819 - -13.4  -5.02476   ACAGTCCGGAAAAAA CACAAACGACCACCAATCCCTCCTTG CCTG CAAAGAAGGATCAGTGGTCGACTCCG TATCTCAGACCATCC 100 80
IRT44_RS18250 3723020 .. 3723051 - -15.2  -5.21236   AACTGACAACAAAAA      CACCCCCTCCGA ATCATCTG CCGGAGGGGGTG       TTAGCATGACCATTT 100 63
IRT44_RS18235 NONE
IRT44_RS18230 NONE
IRT44_RS18225 3717337 .. 3717363 -  -7.3  -5.52986   ATTTTACTAAAAAAA         GAAAAAGAGCC GCTTG GGCTCTTTCAC         CACTCATACCATCCG 100 22
IRT44_RS18220 3715837 .. 3715870 - -17.5   -5.4505   TTTCCCAAGAAAAAA     CCCTCCAATCGGTCG ATTC CAACCGTTTGGAGGG      AAGGAGCGCTTTCGG 100 62
IRT44_RS18205 3712785 .. 3712795 -  -8.2  -3.25111   TCAAAATGATGAACA                 GCGC CCT GCGC                 ATCCTGGAGCAGCAG  59 365
IRT44_RS18195 3712174 .. 3712214 - -11.8  -3.92869   CTATCCACGGACAAA  GGGAACATGCGGCTCCGC AATGG GCGGAGCCAGTCATTCCC  TTTTGCCCGGGCAAA  86 72
IRT44_RS18185 NONE
IRT44_RS18180 3710552 .. 3710570 - -11.7  -5.36441   TGCGGAGAGAAAAAA             GCGCCTC TTAAG GAGGCGC             TTTTTTCGTGTTTAG 100 37
IRT44_RS18175 3710093 .. 3710121 - -12.5  -4.22041   AAATGCCAACACAAA        TACAGCCGTTCAA ATA TCGAACGGCTGTT        GTCAGGTGATAAAGC 100 27
IRT44_RS18165 NONE
IRT44_RS18160 3708024 .. 3708039 -  -3.9  -5.52384   CCCTGACGAAAAAAA              CACCG TGGCAT CGGCG               TTATTTCACATGCGC  85 31
        ssrS 3707121 .. 3707142 - -12.3  -5.41143   GATCGCGCAAAAAAA           CCTGGAACG ATAA CGTCCCAGG            TTTTTTCGTGGTCGA 100 78
IRT44_RS18130 NONE
IRT44_RS18125 NONE
         gmk NONE
        rpoZ 3702262 .. 3702278 -  -6.6  -5.75342   TGCTGCGAAAAAAAA              CAACCT GCGTG AGGTTG              TTTGAAAGCAATAAC 100 59
       coaBC NONE
        priA NONE
         def NONE
         fmt NONE
        rsmB 3695658 .. 3695702 - -10.8  -3.98745   CAAGGACGCAAACAA CAGCAAAGGAGCGACA-TCCG CTGA CGGAGTGCCACCCCTTTTCCG CTACCTTTTTCGTTT  84 26
        rlmN NONE
IRT44_RS18080 NONE
        pknB NONE
        rsgA NONE
         rpe 3690124 .. 3690146 - -13.5  -4.24123   CCAACAACGTCAAAA           GCCATCCTC ACAAA GAGGATGGC           TTTTTGCTGTTATGG 100 42
IRT44_RS18050 NONE
IRT44_RS18045 NONE
IRT44_RS18040 3684810 .. 3684829 -   -15  -5.82172   ATGAAGAGAAAAAAA            GCCGCGGA ACTA TCCGCGGC             TTCATTCCTTGCCTC 100 114
        thiT 3684072 .. 3684112 - -13.2  -4.50976   CCGTAGACGAGAAAA TGGGTGCGGCACGCCGCCT GCCG AGACGGCA-GCCGCCCCCT  GTCTGAATCTTTTGC 100 47
       spoVM 3683385 .. 3683399 -  -7.8  -5.48303   ACAACGCGAAAAAAA               GCACCC GCG AGGTGC               TTTTTTGCATTTTCC 100 234
IRT44_RS18020 NONE
IRT44_RS18015 NONE
IRT44_RS18010 3679928 .. 3679950 -   -12  -4.88222   ATGAAAAGTGAAAAA           CCTCCCTGTA TCG TTCAGGGAGG           CTGTCACCTTTACGC 100 35
       sdaAB NONE
       sdaAA NONE
        recG 3676065 .. 3676081 - -13.7  -4.78933   TCAAAAGAGAGAAAA              GCCTGCC GAG GGCAGGC              TGATGCGAGCGGCGC 100 138
IRT44_RS17980 NONE
IRT44_RS17975 NONE
IRT44_RS17970 3669315 .. 3669332 -  -2.5  -4.08692   CAACTCGCGCCAAAA             CGGCCCG TCTG CTTGCCG              ACCCTGTCCCTTCTG  55 42
IRT44_RS17965 3668719 .. 3668751 - -11.4  -5.63517   GGCGCAAACAAAAAA     CCTTTCGTCGTCCCG CTCC CGGGATGA-GAAAGG      TTTGCGTGTGCGTAT 100 73
IRT44_RS17960 NONE
IRT44_RS17955 NONE
IRT44_RS17950 3667420 .. 3667446 -  -7.2  -4.81249   CCGCAAATGCAAAAA         GCCATCCGCTTC CTA AACGTGGATGGC         TCTTCATTATGCCCA  85 50
IRT44_RS17935 3664279 .. 3664296 -  -6.3  -2.94099   CGGTTTGAGCAGATA             TCCACTT TGCA AAGCGGA              ATTTTTCTTCCTGTC  52 87
IRT44_RS17930 3663623 .. 3663647 - -11.4  -5.29445   CCGGAACAAGAAAAA          TCGATGCGCC TGCCC GGCGCATCGT          CTCGACGCGTTGCAT 100 54
IRT44_RS17925 NONE
IRT44_RS17920 3660106 .. 3660147 -  -5.2  -5.20328   GCTGAAAAAAAGAAA CAGGGAGGCGTAT-TCCGGC ACGT ACCGGTCATAT-CCTCCCTG TCTGCTTCCCAAACG  83 90
IRT44_RS17910 NONE
IRT44_RS17905 NONE
IRT44_RS17900 NONE
IRT44_RS17895 NONE
IRT44_RS17890 3653691 .. 3653724 -  -8.1  -2.52464   TCCTGCCGGAAGGGA     TGGCCGAAC-GGATCG ATC CCAGCCAGCTCGGCCA     GGGACACGCAGCGAT  53 521
IRT44_RS17880 3652337 .. 3652354 -  -9.9   -5.0538   CCGCATTGCAAAAAA             GATCGGA ACGC TCCGATC              TTTCTGATTACGGCC 100 33
IRT44_RS17875 NONE
IRT44_RS17870 3650600 .. 3650620 -  -7.5  -5.29385   AACCCAACGAAAAAA            GCCACCCGC ATG ACGAGTGAC            TGTTCTTCGAAGCGA 100 85
         ggt 3648406 .. 3648429 - -12.4  -4.62203   TGCAAACAACCAAAA          GACCCTGCCA TGTT CGGCAGGGCC           TCGAAGGGAATAATC 100 44
IRT44_RS17860 3647039 .. 3647061 - -10.5  -5.60689   TTACAGAATAAAAAA           CCGCCGGGA TTCGT TCCAGGCGG           TCGTCTCACTCCGGC 100 134
IRT44_RS17855 NONE
IRT44_RS17850 3645319 .. 3645362 -   -13  -2.73875   CTGTCGCGAACAGCA CACGGCTCTCCGCGTTTCCC GTCC GGATTGCGCGGAGAGCTGTG TTTCGTTTTGGAACA  77 109
IRT44_RS17835 NONE
IRT44_RS17830 3642768 .. 3642789 - -10.2   -5.0133   GAGCGCGTCAAAAAA           CCCCTTCT GCATCG AGAAGGGG            TTAGGGGCAAGAGCG 100 44
IRT44_RS17825 3642378 .. 3642406 - -11.8  -4.38927   CTTTGACATAACAAA        CAACCCGGAC AAATATGCA GTCCGGGTTG        TTGCTGTTTGATGGA  95 130
IRT44_RS17805 3638285 .. 3638311 -  -3.7  -4.78752   ATGACAAGCGAAAAA        CACCCGC-CC TATTCCCG GATGCGGGTG         TTCAATTATCTCCAA  72 54
IRT44_RS17800 NONE
IRT44_RS17795 3636462 .. 3636489 -   -12  -5.79595   CCGTAAAACAAAAAA        GCCCCTCTCCCC GTTA GGAGAGAAAGGC         GGGAACTCGATTCCG 100 41
IRT44_RS17765 NONE
IRT44_RS17760 NONE
IRT44_RS17755 NONE
IRT44_RS17750 NONE
IRT44_RS17745 NONE
IRT44_RS17740 NONE
IRT44_RS17735 NONE
IRT44_RS17730 NONE
IRT44_RS17725 NONE
        dmpG NONE
IRT44_RS17715 3622686 .. 3622714 - -10.2  -4.54026   GTTGAAACAAAATAA        GCCGACCCCGGT CGCGT ACCGGGGCCATC        TAGCAGATTACGGTC  91 39
IRT44_RS17700 NONE
IRT44_RS17695 NONE
IRT44_RS17690 NONE
IRT44_RS17685 3615846 .. 3615872 -  -8.7  -3.60792   GCGGGAACGGGCAAA        CTG-TCCCGCCA AGAG TGGCGGGAGCTG         ACCGACAGGCTGATG  66 243
IRT44_RS17665 3611634 .. 3611667 - -13.9  -5.66989   GAAAGATGAAAAAAA     CCTGTCCCTTGCCCGC CTA ACGGGC-AGTGACAGG     TTTTCGTGTCGTCAG 100 37
IRT44_RS17660 3609696 .. 3609707 -  -5.8   -2.5409   ACAAGCTGGAACCGA                TCGC CTAC GCGA                 TCTTCGTGCCCGTCT  49 361
IRT44_RS17645 NONE
IRT44_RS17640 3606859 .. 3606885 - -10.9  -3.72642   AATGAATGACGGAAA         GCCAGCCGT ACGTAAGAA ACGGCTGGC         TTTGTATTGAAAATC  80 95
        rsmD NONE
        coaD 3605219 .. 3605230 -  -4.4  -3.02947   CAGGCACCAGATACA                CTGA TTGC TCAG                 GGTTGTGCAGCAAAT  48 22
IRT44_RS17615 NONE
IRT44_RS17610 NONE
IRT44_RS17605 3601265 .. 3601296 -  -3.1  -4.58395   GCCATCCTTCAAAAA     TGAGAC-GCTCGATC GAGG GATCG-GCAATCCCA      TCTTGAAAACACACG  64 44
        rpmF 3600977 .. 3600998 - -10.9  -5.14563   TTCGTCATGAAAAAA           GCAAGGTGA TTTC TCACCCTGC            CTTTTCTTACTTCGC 100 32
        fapR NONE
        plsX NONE
IRT44_RS17585 NONE
        fabD NONE
        fabG NONE
IRT44_RS17570 3596064 .. 3596088 - -16.5  -2.52464   GGGTGTGTGAAGGGA          GAAGTCCCGCG TGA CACGGGACTTC          CACTGAACAGACTAC  91 37
        fabF NONE
         rnc 3593934 .. 3593960 - -12.3  -5.80364   AGCCTAACAAAAAAA         CCCGTTTTCCC TCATG GGGAGAACGGG         TTTTCTCACGAATCA 100 50
IRT44_RS17550 NONE
IRT44_RS17545 NONE
IRT44_RS17540 3587927 .. 3587957 - -16.2  -4.27512   GTCGAGAACAAAGAA       GCTCCTCTCCGGCA TCC CGCCGAAGAAGAGC       CTGTTTCGTTCACCT 100 55
         smc NONE
        ftsY 3582846 .. 3582872 -  -9.5  -5.58454   CCCATACGAAAAAAA         CCTGTATCGCC GTGAA AGCAATACAGG         TTTCCTGTCCCTATC 100 50
IRT44_RS17525 NONE
IRT44_RS17520 3580457 .. 3580477 -  -3.9  -3.06831   GGAAGTTGGATGTAA            CGCACCAGT TGG ACCAGCGCA            ATATCAATGGATTTC  46 132
IRT44_RS17515 NONE
IRT44_RS17510 3578992 .. 3579030 - -13.3  -3.61983   GCAATTGACAGATAA  GAAGCCCTTGC-TGCTCCC GAC GGGC-CATGCAAGGGCTTC  GTCATTTTTTCATCT  86 27
IRT44_RS17490 NONE
IRT44_RS17485 3574355 .. 3574378 -  -2.4  -2.91264   TTTTTTATTGACACA          GATTACGGAC GAAT GTTCACAATC           ATCGCCTCCGGACCG  41 4
IRT44_RS17480 NONE
         ffh 3572435 .. 3572463 - -10.4  -2.73681   TATTTATCTGAACCA       TCGCGTCACCTGCT TAA AGCAGG-G-CGCGA       AGAGATCATACAACA  69 41
        rpsP NONE
IRT44_RS17465 3571813 .. 3571832 -   -10   -5.1861   GCCAGCATCAAAAAA            GACTGGGA CAGC TCCCAGCC             TTTTTCTCAGACAAT 100 32
IRT44_RS17460 NONE
        rimM NONE
        trmD 3569930 .. 3569946 -  -2.9  -4.36914   CCCGTCCTCACAAAA              CCCAGCA TTA CGCTGAA              ATCCGGGTAGCGGAC  61 108
        rplS 3569487 .. 3569512 -  -4.6  -4.70626   GAATAATGGGAAAAA         GAGGGCTGGC AAGCAA ACCAGACCCC          CTTTGTATGCATAAC  70 47
        lepB NONE
        ylqF 3567876 .. 3567902 - -10.9  -4.98531   GTTTGAAAGGAAAAA         CCCGCCTATCC GCTGT GGATAGACAGG         TTTTCCGAGCTCCTT 100 40
IRT44_RS17430 NONE
IRT44_RS17425 NONE
IRT44_RS17420 NONE
IRT44_RS17415 3564254 .. 3564280 - -10.9  -5.71712   GTGCACACAAAAAAA        GCGCCTTCCAGC GTAA GCCGGAAGGC-C         AAGTGATGGTGCTTG 100 143
IRT44_RS17410 3562195 .. 3562219 - -10.1  -3.32698   CGACTCCAGACAAGA          TTTTGCAGCAG CGG CTGGTGCAAAA          ATTCGGCGGAACGCG  70 408
IRT44_RS17405 3561531 .. 3561559 -  -5.3  -3.29263   AGATTCCGTCCACAA       CCAGGCCATCGT GCTGCA ACGTTGGC-TGG        CCCGCCGATCCGAAC  51 77
IRT44_RS17395 3559702 .. 3559716 -  -2.1  -3.84648   CAACTGAAAAAGCAA               CGCAT TCTTG ATACG               CACCGTTCGGAAATC  53 116
IRT44_RS17350 NONE
IRT44_RS17345 NONE
IRT44_RS17340 NONE
IRT44_RS17335 3550576 .. 3550594 -  -5.3  -3.13504   TTGCGAGTAAAATCA             GTCATAC TTGGC GCATGAC             CTTGAATCGACTGCA  51 60
IRT44_RS17330 NONE
IRT44_RS17325 3549576 .. 3549620 - -10.8  -2.87274   CGTCATAAGGAACGA GGCGGGTTTGTCG--GACATCG CAA CAACGCCTTCGACAAGCCCGCC GATTCCTGACGTTCA  70 117
IRT44_RS17310 3546155 .. 3546192 -   -10   -4.6971   GAAATTGCAATAAAA  GACAGGAGGTTGC--GGC TACT GCCATGCAACCTCCTGTA   TATTTTTCGGGTACC 100 49
        istA NONE
        istB 3543558 .. 3543568 -  -3.2  -3.75169   GATTATGTCATTAAA                 CCGA TTA TCGA                 TATGCGGCATGCAGA  52 256
IRT44_RS17285 3542356 .. 3542377 - -10.9  -5.75342   TTTTCCGAAAAAAAA           GAGTGCCCA TATC TGGACACTC            TCAAAAAGGTTAATC 100 63
IRT44_RS17280 NONE
IRT44_RS17275 NONE
IRT44_RS17270 NONE
IRT44_RS17265 3538066 .. 3538096 -  -3.4  -4.96028   CCGTAAAAAAAAGAA      CAAGCAGGCTTCTA TTGAC CAGA-GCCTGCT-G      AAGTACTTTCTGTTA  73 6
IRT44_RS17260 NONE
IRT44_RS17255 3535836 .. 3535859 -  -8.8  -4.71061   ACGGACATGCAAAAA          GGGCAGGAAC AAGC GTTTCCGCCC           TTTTCCCGTACATCC  90 44
IRT44_RS17245 3532745 .. 3532758 -  -3.1  -3.30619   AATTATTTGTCACAA               GTC-CG GGG CGTGAC               TCCATACAGTTTCGA  45 195
IRT44_RS17235 3531397 .. 3531407 -  -3.2  -3.48772   AAGTCGCTCATATAA                 TCCC CCA GAGA                 AAATTTGTCATTTGA  47 270
IRT44_RS17230 3531015 .. 3531035 - -12.6  -5.02074   TCACCGGTGAAAAAA            TTGCCCCG TTTTC CGGGGCAA            CGTGTACTACTCTTC 100 32
IRT44_RS17205 3528320 .. 3528333 -  -3.1  -4.79949   CCTGCAAAAAAAGAA               GATGA TTTT CCATC                ATGTTGTCATTAATT  70 142
IRT44_RS17200 3527503 .. 3527518 -  -4.7  -3.05463   AGTCTTTGGAGGTAA              GTGTG GAAGAA CACAC               GATGAAGCCAGCCTC  48 60
IRT44_RS17195 NONE
IRT44_RS17190 3524320 .. 3524333 -  -2.4  -3.94664   TAGAAAATTATGAAA               CAAC TTGTTT GTTG                GCCGCCGCTTTGACC  53 4
IRT44_RS17185 3523322 .. 3523372 -  -2.6  -3.17075   CGCCTGTGAAGCCAA CCAGCCTCCTGATTTCCCGAA GGTTCCGTGT TCCGAGGCA-CAGGAGACTGG GGCAACCGTTGGCTT  42 45
IRT44_RS17180 NONE
IRT44_RS17175 NONE
IRT44_RS17170 3519608 .. 3519625 -  -6.9  -4.56597   TCCTTTCTGTAAAAA             GAAGGGC TTCG GCCCGTC              GCGTCTATCCATCCT  76 30
IRT44_RS17165 3518280 .. 3518317 -  -6.3  -5.31059   ACAGGAACGAAAAAA   GAATAGGAGCGACAAGCT CAC AGCTT-TCGCCCCTTACC   AGCAGTGTTTGACAT  90 173
IRT44_RS17160 3517120 .. 3517155 - -11.3  -3.61894   AATTCGTTGTAATAA    GAACCGG-TCCTAATC CTTGT GATTTGGAACCGGTTC    CAACCCGATTATACG  79 34
IRT44_RS17155 3515606 .. 3515632 - -14.5  -2.87344   CATCTCGTCCATACA         GGGTCTGACCG TTTAT CGATCAGACCC         CATTTATTTTTATTG  83 35
IRT44_RS17150 NONE
IRT44_RS17145 3513005 .. 3513036 -  -5.8  -5.60689   GTAGACAACAAAAAA      CATCCCCCTTTC TCCATTAC GCCAGGGGGATG       TCTGCAAAACGAGCA 100 85
IRT44_RS17135 3510777 .. 3510810 -  -4.6  -5.60993   TTTTTGATAAAAAAA     CAGGAGGTTGCC GCTATTCCCA AGCAACCTCCTC      AATGCACGCAGGGAA  91 5
IRT44_RS17130 3505087 .. 3505103 -  -6.7  -3.59979   CCGCGTGATTTCAAA              TAAAGAA CCT TTCTTTA              ATGATATTTTATGTT  62 63
IRT44_RS19355 3503658 .. 3503673 -  -3.3  -3.88559   AAGCAGGCCGATAAA              GATAC CAAGTC GTATC               TACTCAGGGCTTTGT  54 515
IRT44_RS17120 NONE
IRT44_RS17115 NONE
         dgt 3498796 .. 3498815 - -10.6  -3.92373   CAGCCGATTTATAAA            GCGGCCAC GGAA GAGGCCGC             CTTGGAAGAACTGAA  77 520
IRT44_RS17085 3493264 .. 3493305 -  -2.9  -4.45117   CAGATCCCAAAGAAA CCACTGAACACTGACATCA ACGA TGATGTCTGATTACAGTGT  TTCATTATATACGAA  64 391
        vanR NONE
IRT44_RS17075 3491246 .. 3491286 - -11.4  -4.98531   TGCCCAAACGAAAAA GCTCGTTCTTACG-GGT TTAAGTCT ACCGCATAAGAACGAGC  CATTTTTTAATAGGA 100 108
        vanH NONE
        vanA NONE
        vanX 3488517 .. 3488539 - -11.2   -2.8166   GACGAAATAAATGGA           CGGGCGGCAC CTC ACACCGCCCG           TTTGCTCCGCCCATT  71 59
        vanY 3487327 .. 3487366 - -12.4  -2.92777   TTGCACATAGTAAAC CGGCCTTTCC-CGGT-AT CGTGGT ATCACCGTGGAAAGGCCG  CTTCGTTACCCTTCT  76 153
IRT44_RS17045 3484839 .. 3484872 -  -5.9  -5.53288   TGTAAGTCAAAAAAA     CAAGGCCTCTCGTCC AATC GGAAAAGAGGCCGTT      TTTTATACCCATTGA 100 138
IRT44_RS17035 3482628 .. 3482642 -  -2.8  -4.12942   CCAAATCGTTGAAAA               CTCCAT GTC ATGCAG               CTCCTTGTTGCAGTT  59 135
IRT44_RS17030 NONE
IRT44_RS17025 3481177 .. 3481199 - -14.2  -5.52023   AGCAGCAACAAAAAA           GCAGCACCTA CTG CAGGTGCTGC           AACCAATTTTTTCGT 100 41
IRT44_RS17020 NONE
IRT44_RS17015 NONE
IRT44_RS17010 NONE
IRT44_RS17005 NONE
IRT44_RS17000 3475833 .. 3475854 -  -7.3  -5.80817   CTGAACATAAAAAAA           CAGCACC TTTTCACT GGTGCTG            CAATTGTTGTCCACT 100 41
         zwf 3474079 .. 3474093 -  -8.6  -2.62613   TTCCACTGCAAATAC               TGCTGT TCC ACAGCA               TCTGCCGGTTTGTGC  58 73
IRT44_RS16990 3473277 .. 3473317 - -16.9  -5.23316   CAGCACATGAAAAAA  GCAGATCGCACCGTGCAGC TTC ACAACACGGTGCGATCTGT  TCGTTTCCATAGCGT 100 99
        yjcZ 3470902 .. 3470926 - -12.9  -5.08824   TTTGCACGTAAAAAA          TCCCTCCCCCA ACC TGAGGGAAGGA          TTGAAAGAGCGATGC 100 151
IRT44_RS16960 NONE
IRT44_RS16955 3467786 .. 3467825 - -15.3  -4.90525   GAAGCGGAAAGAAAA  GGCAAGATGACCTATCA AGCGGA TGATAGATCATCTTACC   CGCAGGCTACGCAAG 100 32
IRT44_RS16950 NONE
IRT44_RS16945 3464978 .. 3465004 -  -4.4  -3.25823   CGTGTGCCATAGCAA         CATCCTCCTCTG CTT CAGATGACAATG         TGCCCCTCCTGTACC  50 13
IRT44_RS16940 NONE
IRT44_RS16935 NONE
IRT44_RS16930 NONE
IRT44_RS16925 3458615 .. 3458630 -    -4  -3.15249   CAGACGTTTCAGGAA              CGG-CTA CCA TAGTCCG              CCTCCTTTGTTCTCG  46 13
IRT44_RS16920 NONE
IRT44_RS16915 NONE
IRT44_RS16910 NONE
IRT44_RS16905 NONE
IRT44_RS16900 NONE
IRT44_RS16895 3444419 .. 3444430 -    -3  -2.87229   ATTGGAGGAGCAAAT                CAAT AGAG ATTG                 GTGAGATCAAACGGT  42 13
        thiO NONE
IRT44_RS16885 NONE
IRT44_RS16880 NONE
IRT44_RS16875 NONE
IRT44_RS16870 3436710 .. 3436738 - -10.3  -5.44721   ACCACGCCAAAAAAA        GCGCGCCAGGA TCAACTG TCCTGACGCAC        TCTTTGCGCTCGCCT 100 62
        aceB NONE
IRT44_RS16860 NONE
IRT44_RS16855 NONE
IRT44_RS16850 3431543 .. 3431553 -  -5.4  -2.87132   CCTCCTGTTGATATA                 GGAT GGA ATCC                 GCCCCCACAATCCGC  49 79
IRT44_RS16840 NONE
IRT44_RS16835 NONE
IRT44_RS16830 3424477 .. 3424507 - -11.9  -2.59971   GCAGCATACACGAAT      GAGCCACATCCCGC CAAA GTGGG-TGTGGCTC       TCACTGTGCCATAAG  73 41
IRT44_RS16825 3423204 .. 3423254 -  -6.4  -3.14026   GATACCCATATGCAA TTCCT-CCTTTCGCACATGTAGT CGTCAT ACTCTATGTACAAAAGGTAGGAA ATGCTTATACGCGTA  53 85
IRT44_RS16820 3423066 .. 3423086 - -15.5  -5.55698   GAGAAGTGAAAAAAA            GCAAAGGGG GAG CCCCTTTGC            ACCTCAGCGCAATCA 100 50
IRT44_RS16815 3422684 .. 3422700 -  -2.9   -5.5112   CTCATCAACAAAAAA              GAGGG ACGTACG CCCCC              TTTACATCATATCAT  83 27
IRT44_RS16810 3421706 .. 3421725 - -13.6  -3.59262   GTCTACACGCTGAAA            GGGAGAGC AACT GCTCTCCC             TCTGCTGATTGACGT  86 64
IRT44_RS16805 NONE
IRT44_RS16800 NONE
IRT44_RS16795 NONE
IRT44_RS16790 NONE
IRT44_RS16785 3416890 .. 3416923 - -11.1  -4.14633   CATCTGTAAAAAATA     GGATGCAGATGATGT TATG ATAACATCTGCATCC      TGTATGGTAAATATT  91 46
IRT44_RS16780 3416297 .. 3416307 -  -6.8  -5.00616   CTCTTCCGGAAAAAA                 GCGT AGG ACGC                 AGACGCGGGGGAAAC  86 163
IRT44_RS16760 3412303 .. 3412328 - -16.9  -5.47159   CGGGAAGACAAAAAA         CCGTCCCCTGC GAGA GCAGGGGACAG          TCCACAAACGACCGG 100 47
IRT44_RS16750 NONE
IRT44_RS16745 3407908 .. 3407922 -  -3.6  -2.62184   GCTTGTTTGATATGA               CAAAAC CAA GTTTTA               TTTCATGCTCGCAGC  43 48
IRT44_RS16740 3406732 .. 3406772 -  -9.2  -2.73875   CGTTGCCGAATACGA GAATGGCCATCACTGCCAGC GAA ACCG-CAGTGAC-GCCATTC AGCACCCGATTCAAG  62 94
IRT44_RS16735 NONE
IRT44_RS16730 NONE
IRT44_RS16725 NONE
IRT44_RS16720 3402838 .. 3402848 -  -2.4  -3.02144   GCAGTTCTTCCAAGA                 TGCC CAT GGCC                 GTTCCTCCTTTACTG  41 35
IRT44_RS16715 NONE
        dgoD NONE
IRT44_RS16705 NONE
IRT44_RS16695 3395831 .. 3395847 -  -2.1  -2.88249   GACATCTTGTAGATA              CTGCACC CCG AGCGCGG              CCGCGGGAATAGCTT  41 471
IRT44_RS16685 NONE
IRT44_RS16680 NONE
IRT44_RS16675 3393693 .. 3393714 - -17.3  -3.14931   GGGATGCGTCACGAA           CGGAGCCGG ATGA CCGGCTCCG            TTTTTGTCGGTTGAA 100 48
IRT44_RS16650 3388941 .. 3388964 - -14.6  -4.68593   TGCATTATGCAAAAA          CACCCTACCG ATGC CGGCAGGGTG           TTTTGCACGTGCAGT 100 62
IRT44_RS16645 NONE
IRT44_RS16640 3387982 .. 3387999 - -10.5  -4.36903   CGCATCAAAGAGAAA             GCCGGGC AGAT GCCCGAC              TGTCACTTCACCCGT  89 28
IRT44_RS16635 3386085 .. 3386106 -  -4.3   -3.8323   AATGGCAAATAAAGA           TCGGCAGGT TCGC ACCGGCCCA            AAGTTTGTTCCGCCA  59 165
        sucC NONE
        sucD 3383827 .. 3383860 -   -14  -5.60993   GCGGGCACAAAAAAA     GAAAGAGGGCAAGC GTCCAT GCTTGTCCTCTTTC      GGCACGCAAACTGCG 100 52
        dprA NONE
        topA NONE
       trmFO NONE
        xerC NONE
        hslV 3377511 .. 3377522 -  -5.8  -2.79831   TCAAGGTTCAGCACA                GGGA GTCC TCCC                 TTCCTTTCATTTCAT  51 32
        hslU NONE
        codY 3375210 .. 3375236 -  -5.2  -5.14563   TTGCCCATGAAAAAA         GGTGTAGC TTTTCACTGTC GCTACACC         TTTCCTTCACAGAAT  83 88
        flgB NONE
        flgC NONE
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
IRT44_RS16545 3367592 .. 3367628 -  -5.2  -4.25104   TGTTGCTTATGAAAA   CGACAGACG-CGGTGC TTGTATG GC-CCGTCGCCTATCG   AAGCAACTCGCTCGT  66 20
IRT44_RS16540 3366313 .. 3366327 -   -10  -3.13403   CCCCTTTCACGAACA               GCTAGC CCG GCTAGC               GAATGCCAGTAAAGG  68 21
IRT44_RS16535 NONE
        flgG NONE
IRT44_RS16525 3364674 .. 3364684 -  -2.4  -2.97021   TTTTGAAACATCACA                 CGTG CCT CCCG                 CTATTCAATGAAATC  41 26
IRT44_RS16520 3364220 .. 3364235 -  -5.4  -3.40403   CGTGGCTTACGACAA              GACG-CG CTT CGTCGTC              AGCACCTGTACGATT  54 1
        fliM NONE
        fliY NONE
IRT44_RS16505 NONE
IRT44_RS16500 3360480 .. 3360490 -  -5.4  -3.65529   ACAGCGCCAGCGAAA                 TCAG CAC CTGA                 TTGGGCGGCATCTGC  59 309
        fliQ 3359691 .. 3359705 -  -2.8  -2.82023   CAGGTAGATGAAGCA               TGATTG CAG CTATCA               TTTTTATCTATCCCA  41 33
        fliR NONE
        flhB NONE
        flhA NONE
        flhF NONE
IRT44_RS16465 NONE
IRT44_RS16460 NONE
IRT44_RS16455 NONE
IRT44_RS16450 NONE
IRT44_RS16445 NONE
IRT44_RS16440 NONE
IRT44_RS16435 NONE
IRT44_RS16430 3347557 .. 3347573 -    -3  -3.26471   CCAGTCCTACATCAA             CTGCGAT TTCC ATCGC-G              ACAGAGCTGAGCGCA  46 0
IRT44_RS16425 NONE
IRT44_RS16420 NONE
IRT44_RS16415 NONE
IRT44_RS16410 3344529 .. 3344552 -  -9.6  -5.40072   TGTCCCCCAAAAAAA          CACCGCCTTAC TTC GCA-GGCGGTG          TAGTGATAATCCGGA 100 9
        rpsB 3343489 .. 3343522 - -12.6  -4.16284   ATAGTGGTGAATAAA    GGGTGGAC-G-GGGTT CTGA AACCCTCAGTCCACCC     TCTTAACACTTGCTT 100 39
         tsf 3342517 .. 3342540 -   -14  -4.39002   AAACCTCTTACAAAA          TAGGGAACAC ACAG GTGTTCCCTA           TTTCGATTGTTACTG 100 35
        pyrH NONE
         frr 3341062 .. 3341085 - -13.2  -3.10057   AGAGATATAGACATA          CATCCCCCTC AACA GAGGGGGATA           CCTGGCTTACACTTC  81 32
IRT44_RS16385 3340263 .. 3340274 -  -3.6  -2.71712   CCTCTCGGCTTAAAC                CGCC CCGT AGCG                 TCGAGCTCGGCCCTG  44 8
IRT44_RS16380 NONE
IRT44_RS16375 NONE
        rseP NONE
        ispG 3335741 .. 3335754 -  -3.8  -4.05788   TTTTCGCAAAGCAAA               CCCA CGTGCC TGGG                GAGCCTCGCAGCGGG  59 110
IRT44_RS16360 3333859 .. 3333892 -   -11  -4.34482   TGTCTGAAAAAAACA     GGGGGTACTCCCAC GGTTCA ACGGGAGTACCCCG      ATTTGATTCGACAAA  91 65
IRT44_RS16355 3329359 .. 3329376 - -11.3  -4.55295   TCGGCCAGAAAGAAA             GAGTGGG TTTC CCCACTC              TCGCTCTGCGTGCGT  95 147
        rimP NONE
        nusA NONE
IRT44_RS16340 NONE
IRT44_RS16335 3327102 .. 3327115 -  -3.1  -2.91264   TGGCGTATTCATACA               CTCGA GTCT TCAAG                TGATCTTCACCCCTT  42 46
        infB NONE
IRT44_RS16325 NONE
        rbfA NONE
IRT44_RS16315 NONE
        truB NONE
IRT44_RS16305 NONE
        rpsO 3320721 .. 3320735 -  -8.5  -4.96762   CAGACAGCAGAAAAA               GCGGG ATGAA CCCGC               TTTCCAACTGATGTC  90 42
         pnp 3318310 .. 3318345 -  -6.3  -5.63236   ACGCAAAAAGAAAAA   GCTTCCGT-ACGCGAAG ATAC CTTCGAGTGAC-GAAGC    CTTTTGCTTGTAAGT 100 40
IRT44_RS16290 NONE
IRT44_RS16285 3315780 .. 3315795 - -10.4  -5.21709   GCTTATACGAAAAAA              TCCGGC CTAT GCCGGA               TTTTTTGTCCTCCCT 100 43
IRT44_RS16280 NONE
        dpsA NONE
IRT44_RS16270 NONE
IRT44_RS16265 NONE
        dapG NONE
        dapA 3310466 .. 3310480 -  -2.1   -5.5074   GAACTCAAGAAAAAA               CAACC AAATA GATTG               CAGCCCAGTCACGAC  80 107
IRT44_RS16250 3308661 .. 3308686 - -16.3  -4.86731   TTTTTTTAAACAAAA         GGAACCCTTGT GAGA ACAAGGGTTCC          TATACTTCCATGATG 100 25
IRT44_RS16240 NONE
IRT44_RS16235 3306966 .. 3306990 -  -4.2  -4.87665   TGTCATGCATAAAAA          GGCAGCCG TCTGCTGTT CGGCTGCT          GTTCGTTCATGTCTA  74 77
IRT44_RS16225 3303607 .. 3303621 -  -2.8  -2.57132   CCCGCTTGTTACAAC               CGTC TGCGTAC GACG               TGAAAGTGAATCTTG  40 4
IRT44_RS16220 3302441 .. 3302473 - -15.8  -3.76952   CTTAGTGAAGGTAAA      GAACAAGGCTAGTT GCTCG AACTAGCCTTGTCC      GCATGCAGCCTGCTG 100 45
IRT44_RS16215 NONE
IRT44_RS16210 NONE
IRT44_RS16205 3298700 .. 3298719 -    -7  -5.60993   GTTTTCATAAAAAAA            GCGCCCGG AAGT CCGGGCAA             TTTGAACGACCACCA 100 143
IRT44_RS16200 3298323 .. 3298362 - -12.4  -3.44672   GTTCAGCAAAACAGA CGA-GAAAAGGCGG-GAC CGTACC GTCGCCGCCTTTTCATCG  TGGAAATGATCTCTG  80 102
IRT44_RS16195 NONE
IRT44_RS16190 NONE
IRT44_RS16185 3294808 .. 3294824 -  -2.9  -3.54424   TTCCAGTCGCGGAAA              TTGTCGA GAA CCGACAT              GTACTATTCCCTCCT  49 117
IRT44_RS16180 3294532 .. 3294548 -  -6.5  -5.58522   GACAGAAAAGAAAAA              TCCCCGT AAA AAGGGGA              TTTTCAAGCAAGTTA 100 38
IRT44_RS16175 NONE
IRT44_RS16170 3292456 .. 3292474 - -10.3  -3.92804   GAAGAAAGTACGAAA             GGCAAGC GAGAT GCTTGCC             TCAGGCTGAAGACAA  82 292
        rimO NONE
        pgsA 3290425 .. 3290451 - -11.7   -3.8165   CGGAAGAAAAGAAGA         CCAATACCCGT TTTTC ACGAGTATTGG         ATGACATTGCGATTT  86 13
IRT44_RS16155 NONE
IRT44_RS16150 3287411 .. 3287447 - -15.2  -4.62069   TTCGCATCGCAAAAA   GAGGCCGTC-CGTCCCG AAAA CGGAACGTGACGGCCTG    TGTCTGCGTGCTGTC 100 45
        recA 3286213 .. 3286235 - -14.2  -3.92324   GGTTTGAACATGAAA           CAGCCTGTCA GGC CGACAGGCTG           TCATGCGATTAGTCG  93 34
IRT44_RS16140 3285327 .. 3285344 -    -7  -4.64763   TTAGTTAAAAAACAA             GACCGA TTTTAC TCGGTC              CGCTGAATCCGCACT  79 180
         rny 3283651 .. 3283675 - -13.7  -5.14563   GGGCGCACCAAAAAA          GTAAAGTGGCC CAA AGCCACTTTAC          TTTGCATACTCGACT 100 22
        ltrA 3281723 .. 3281737 -  -4.2  -4.07568   CGGTCCGGTTCAAAA               GCGG TTGCAGG CCGC               CCGCGTTTCTTTCGC  61 112
IRT44_RS16125 3280770 .. 3280789 -  -2.1  -4.63542   CATAACCCCGAAAAA            TTCCTGC TTACGC GCAGCAA             AGATTCAAAAAATTC  65 55
       spoVS 3280391 .. 3280415 - -10.1  -5.75822   CACAAACGAAAAAAA          CCTGTTCATTC AAC GAACAAACAGG          CCGGTTAAATCGTAT 100 51
IRT44_RS16115 3279187 .. 3279227 -    -4  -3.50133   GACTGTGAGAAAAAG  CTGCCCCACCTTACCCGA CAGGT TCCGATAAGATGTGACAA  AATTGTGCATAGACT  52 144
IRT44_RS16110 NONE
IRT44_RS16105 3276492 .. 3276510 - -10.3  -5.61596   ACCCCGACAAAAAAA             CCTCTCC GCGCG GGAGAGG             TTCTTTCGCTTACGA 100 50
IRT44_RS16095 3274572 .. 3274586 -  -5.7  -3.04144   GTGCTACTTCCAATA               CGTTG GGGAA CAACG               TCATTCTCTCCTCTC  53 49
IRT44_RS16090 3274005 .. 3274016 -  -3.6  -3.53012   CGCTTGCCCGGGAAA                CGCA ATGA CGCG                 ATCGCTAGGTAACGG  52 30
IRT44_RS16085 3272700 .. 3272730 - -16.2  -5.14563   CTCGCCATGAAAAAA       GCAGACCTAGTCCA GTT TGGCCCAGGTCTGC       TTGCTCTACGGACGT 100 31
IRT44_RS16075 3271183 .. 3271203 -  -9.7   -4.1721   ATGCACAGGGGAAAA            GCGCCTC GTAAAGA GAGGCGC            TTTTGATTTGCGTCA  83 38
        miaB NONE
IRT44_RS16055 NONE
        cotE 3266050 .. 3266069 -  -7.9  -6.12458   GAAAAAAAGAAAAAA            GAGGAGA TGTGCC TCTCCTC             TTAATCCAATTCGTC 100 26
IRT44_RS16045 3264625 .. 3264635 -  -6.8  -2.85351   TCCCCGCAGATCAGA                 TGCG ATT CGCA                 TTCAGGTCAATATGG  53 45
        mutS NONE
        mutL NONE
IRT44_RS16030 NONE
        miaA 3258070 .. 3258085 -  -3.2  -2.89564   CTTGTATGTTATATA              TTCGGC AATC GCTGAA               ACTTTCCTGCCAATA  42 3
         hfq 3257753 .. 3257775 -  -4.8   -5.1287   CTGACAGTGAAAAAA           GCCCGGAT GGCTAAG ATCCCGGC           TTCGTTGGTGTGACG  80 41
IRT44_RS16015 NONE
IRT44_RS16010 3255815 .. 3255828 -  -2.3   -2.6252   TCATACCACAATTCA               TCCGG TTGT CAGGA                AGCGGGCCAGACAAA  39 20
        hflX NONE
IRT44_RS16000 3253129 .. 3253156 - -11.3  -5.10029   ATCAACGCGAAAAAA        CGGGAAGCGTC TCTTGC AACGCTCCCCG         TTTGCAGGGCAATTG 100 66
IRT44_RS15995 NONE
        glnA 3251158 .. 3251186 - -12.4   -5.4593   GCAAAACAACAAAAA        GGAGCAGGGCCA TCACT CGGCCCCACTCC        CGGAACTTCCCCGCC 100 66
IRT44_RS15975 3248322 .. 3248359 -   -13  -3.43546   CTAGGAAAACGAATA  GCCCGTATCTTTTCCGAC CATC GTCG-AA-AGATACGGGC   TTGTTTTTTCTATGA  82 100
IRT44_RS15965 3247145 .. 3247168 -  -2.3  -2.57344   CATCGGCGGCACAAC          GCAAGCGAA AGGATA TACGCTGGC           CTGCTCCGCTGTCTT  39 50
IRT44_RS15960 3246840 .. 3246866 -   -13  -4.82901   TTCGTCGTAGAAAAA         GACATCCAAGCG AAG CGCGTGGATGCC         TTTTTGTGCCAGTAC 100 49
        crcB 3246424 .. 3246441 -  -3.3  -3.53012   TCCCTTCGCTTCAAA             CGCGCTG GCGT CAGCCCA              CATGCCGGCCCAGCC  49 18
IRT44_RS15950 3244091 .. 3244120 - -11.5  -4.87291   GATTCCAACGAAAAA       GCTCTCTGCAC-GA CAA CCTGCGCAGAGAGC       TCTTTTCTTTGTTTA 100 62
IRT44_RS15940 3243403 .. 3243424 - -10.1   -5.9003   AAAGGAACAAAAAAA           CGCCTCCCG CTTC CGGAAGACG            TATGGTGTACGCGTA 100 42
IRT44_RS15930 3240670 .. 3240705 - -10.4  -3.34013   TATCCGTGGAACGAA    GCAAACGGACGAGTGA ATAC TCCCCCGTCGGTTCGC     GCCATGACGGATACA  69 499
        pdhA NONE
IRT44_RS15915 3238008 .. 3238030 - -13.5  -3.90744   GGTGTGCCTAAAGAA           GGCGGAAAG CTGAT CTTTCCGCC           GCATGTGCAGTTCAA  90 44
IRT44_RS15910 NONE
        lpdA 3235113 .. 3235139 - -14.4  -4.06295   CATCAAAAAAAGGAA         GCCCCGCATCTG TTG CTGATGCAGGGC         ATGTTGTGCGTTTAC 100 37
IRT44_RS15900 3234845 .. 3234860 - -10.4  -4.99435   TTGAACAATGAAAAA              CGCCCT GTTA AGGGCG               TTTTGCGTATTGCAG 100 17
IRT44_RS15885 3232688 .. 3232723 -  -9.8   -4.7497   CTCACGCATCAAAAA    CAGGCAGCCCG-C TTACAGAAAGT GTCGGGCTGCCTG    TTTTGCATCCACTCG 100 79
IRT44_RS15875 3231276 .. 3231313 -  -4.1  -2.72144   CCATCCGGCTGAAAT   CCGCCT-GATGCCCTCAA CGG TTGTTGGAATCGAGACGG   GTTTCCCGTTTTTCC  44 1
IRT44_RS15870 NONE
IRT44_RS15865 3229716 .. 3229755 -    -8  -5.09426   TTGAACGTGAAAAAA  GAGCAGTC-CAATCGAT GAACAAT ACCGATTGCGTCTGCTC  TTTTTTGCTTACTCG  93 34
IRT44_RS15855 NONE
IRT44_RS15850 3226387 .. 3226400 -  -3.7  -3.33696   GCGCTGGCGAAGGAA               GCGCG GTAT CGGGC                GGAAGCCTGCCGCAG  49 425
IRT44_RS15830 3224070 .. 3224098 -  -8.8  -3.54459   GCAATTTCTCCCAAA       GTGAGCGGCGGTG TCAG CCCCACCGCTC-C        TTGACCTTCAGGCCG  70 10
IRT44_RS15805 3219731 .. 3219776 -  -3.4  -4.77036   GCGGACGAGGAAAAA GCATCCGCGAATGCGG-CCGTCC CGT GAACGGACCTCAT--ACAGATGC TTTATTATCCAAATG  70 122
IRT44_RS15800 NONE
IRT44_RS15795 NONE
IRT44_RS15790 NONE
IRT44_RS15785 NONE
IRT44_RS15780 NONE
IRT44_RS15775 NONE
IRT44_RS15770 3213668 .. 3213691 - -18.2  -4.85782   CCCGCCAAAAAGAAA          CAGCCTGCGG TCCC CCGCAGGCTG           CCCTCGATTCTATTC 100 35
IRT44_RS15760 3211101 .. 3211125 -    -5  -2.68471   CAAAGACGCAAACAC         GCATGGCTGTC AGCT GACAGGCA-GC          CTCACCTCGAAGGTG  47 10
IRT44_RS15755 3210304 .. 3210325 -   -13  -5.08824   CGCGCACTGAAAAAA           GCCGCTGC TATGCC GCAGCGGC            CTCTGACTGAAGACA 100 422
IRT44_RS15745 NONE
IRT44_RS15740 3207600 .. 3207612 -  -2.6  -2.71708   CAAACCTCAGACAAC                CAGG CAGTT CCCG                TCGGCGATCAACTGT  39 4
IRT44_RS15735 3206722 .. 3206747 - -16.9  -5.02074   TGAGGCCCGAAAAAA         GGCCACCTCGC CCTA GCGAGATGGCC          GAATGCGCCGCGTTA 100 38
IRT44_RS15730 NONE
        parC NONE
IRT44_RS15720 3201514 .. 3201524 -  -5.4  -3.43773   GGGCACAGCGAAACA                 CAGT GAA ACTG                 GCAGTGCGTCCCGCA  54 100
IRT44_RS15715 3201072 .. 3201097 - -11.2  -5.07567   GCACACGGCAAAAAA         GCAACCTCCC GTCATT AGGAGGTTGC          TCAGGCCCGATCACC 100 122
IRT44_RS15710 3198498 .. 3198521 - -13.2  -5.47159   CCTTAAGACAAAAAA          GGATCGAGGA ACAG TCCCCGATCC           AGGATGAAGAACTTC 100 55
IRT44_RS15705 3196080 .. 3196116 - -20.2  -4.24342   GTCCGGACGAACAAA   CGGCGCG-ACCGTCACG CTGA CGTGACGGGACGCGCCG    TTCAATTGGGGTTGT 100 54
IRT44_RS15690 NONE
IRT44_RS15685 3191314 .. 3191337 -  -3.7  -5.40072   TTTCCTGCAAAAAAA          CGGCACCGT TTTCCC AGGGGGCCG           GGCTGGAAAGGCCGC  85 95
IRT44_RS15680 NONE
IRT44_RS15675 3188564 .. 3188604 - -11.1  -5.93809   TTTTCACAAAAAAAA  GGGGCAGCCCCTCGCCA TCCGGTT CAGCGAGGAACTGACCC  ATATCGTTTTGGAAG 100 317
IRT44_RS15660 NONE
        preA NONE
        hydA 3183588 .. 3183598 -  -2.4  -3.53444   TTACGGCCGTTCAAA                 CGCG GCG CGCT                 TGATGAATTGTCCCG  47 0
IRT44_RS15645 3182524 .. 3182581 -  -4.1   -4.3467   ATCGGCAGATGAAAA CACCCTGCCCGGCGC-G-T-CCGACGCGA TTCG TC-CGGCGGCATCTGCACCTGGCCGGGCG CAGGCTGACAGAGAA  65 107
IRT44_RS15635 3181864 .. 3181880 -    -3  -3.32562   ATAAATGCGCCAGAA             GTCCTGA CAAA TC-GGAC              GGACCTCTGAGAAAA  46 98
IRT44_RS15630 3180037 .. 3180065 - -15.4  -5.00616   GCGGCGCGCAAAAAA        GACTGGCAGAAC CAAAC GTCCTGCCAGTC        TTTGTTTTGTTCGAT 100 40
IRT44_RS15615 NONE
IRT44_RS15610 3174122 .. 3174132 -  -2.6  -3.44622   TATGTTCATAAGTAA                 TATT TTG AATA                 TTTTGTTCATTTTTT  46 82
IRT44_RS15605 3172969 .. 3172987 - -14.6  -2.62851   AAAAGACCGCAGAAT             GGAGAGGG CTG CCCTCTCC             TTACTTGGACATACC  81 26
IRT44_RS15600 NONE
IRT44_RS15595 NONE
IRT44_RS15590 3170222 .. 3170232 -  -5.4  -3.46647   GTTATTCACCAAACA                 GCAA CAA TTGC                 AATTTCTTCTTCACC  54 1
IRT44_RS15585 3169506 .. 3169536 - -16.3  -3.53224   GACTTTGTTCGCAAA       CAAAAACCGCCGG ATTCA CCGGCGGTTTTTA       GTTACTCCTGCTTGT 100 206
IRT44_RS15580 NONE
IRT44_RS15575 NONE
        thiE NONE
IRT44_RS15565 3166593 .. 3166619 - -10.2   -5.4148   TAAATAATGAAAAAA        CCGCAGGACGC TTACTC GCGT-CTGCGG         TTGATCTGCTGTTCC 100 10
IRT44_RS15560 3164611 .. 3164645 -  -7.3  -3.53012   TTGTCGCTGTGTAAA    GCGGCGTGATGATCG GCTCGCA CGAT--TCACGCCGC    TGTAACCGCCGCAAA  64 42
IRT44_RS15555 3162903 .. 3162929 -  -5.9  -4.90266   CCCACTAACTAAAAA         GAGACGAATGA AACAG TCATCCGTCTT         TTTCTCAATTGATAT  78 103
IRT44_RS15550 NONE
IRT44_RS15545 3161462 .. 3161478 - -10.1  -5.85737   ACACGAAGAAAAAAA              CGCTGCA CCT CGCAGCG              GTCAGCGCTTCTCGG 100 27
IRT44_RS15535 3159559 .. 3159588 -  -9.2  -4.36914   GGTGTCGGCACAAAA       CAGCCGG-CGCGC AGCAA GCGCCTCCGGCCG       TTCGTCATGGCCCCG  83 61
IRT44_RS15530 3159162 .. 3159179 - -12.7  -4.86385   ATCCTCAAAAACAAA             CAGCGCG GGTT CGCGCTG              TCGTTTCCATCATGT 100 35
IRT44_RS15525 NONE
IRT44_RS15520 3157953 .. 3157964 -  -5.8  -4.75308   ATCAAGAGTGAAAAA                GGAG GTGA CTCC                 ATTAAATCTATCATA  78 80
IRT44_RS15515 3157832 .. 3157846 -  -2.7  -2.68942   ATCTCCCCATATAAT               GCCCG TGGTG CCGGC               GATAGGAATCGAACC  40 16
IRT44_RS15510 NONE
IRT44_RS15505 NONE
IRT44_RS15500 3157502 .. 3157519 -  -9.9  -5.54079   CCAAAAAGCAAAAAA             CCCTTGA TTTC TCAAGGG              TTTCATATGGAGCGG 100 32
IRT44_RS15490 3154549 .. 3154569 -    -9  -5.49234   ACATGCAAGAAAAAA            TGCCCCAC TGTCC GTGGAGCA            TGTGTTCGTTCACCA 100 101
IRT44_RS15485 NONE
IRT44_RS15480 NONE
IRT44_RS15475 3153628 .. 3153648 -  -6.8  -2.58539   AAGATGATGAATCCA            CCCCCACC CCCAT AATGGGGG            TTTCAACATTTTACA  52 68
IRT44_RS15465 3150527 .. 3150542 -  -3.2  -3.53012   CTGTTCTGGGCCAAA              TCCGCC CATT GACGAA               ATAGACTGGTGCTGC  49 289
IRT44_RS15455 NONE
        mnmA NONE
IRT44_RS15445 NONE
IRT44_RS15440 3147737 .. 3147762 - -16.1  -5.28778   ATGATGTACAAAAAA         CAGCCGCCCGC GGTT GCGGACGGCCG          TGTGCTTCATTGGAG 100 32
IRT44_RS15435 NONE
IRT44_RS15430 3145550 .. 3145577 - -14.2  -5.40072   TTTGCCGCAAAAAAA        GCATCCCGAAGA TGAT CCTCCGGGATGC         TTTGTTACTTGCTTC 100 65
IRT44_RS15425 3144119 .. 3144145 - -10.9  -5.08601   GCAGGCGAAGAAAAA        GGCGTACGCCCC GTTC GGAG-GTACGCC         TTTTGTTTCTGCGTA 100 45
IRT44_RS15420 NONE
IRT44_RS15415 NONE
IRT44_RS15410 3141861 .. 3141877 - -12.3  -5.95539   CGGCAAACAAAAAAA              CCATCCG CCA CGGATGG              TTTTGGTTATGCATG 100 252
        thiS 3141503 .. 3141534 -  -2.3  -2.53911   CCAATTTTCAATGTA      TCCATCTTGTCAG CCTCCT CCGACAAAGTGAA       CGATTTCGATTCGAT  38 3
IRT44_RS15400 NONE
IRT44_RS15395 3139452 .. 3139465 -  -2.3  -3.04398   GGCGCTCTGTAAAAG               TGGCC ACGA GGACA                TTCACTCCTTTTCCG  42 27
        tenA NONE
IRT44_RS15385 NONE
IRT44_RS15380 NONE
IRT44_RS15375 3135901 .. 3135922 - -14.5  -5.40072   CGTCGTCCAAAAAAA           GCCACTGAC CGGC GTCAGTGGC            TTCATTGTTGTTCCC 100 291
        dacB NONE
        dacB 3131490 .. 3131533 -    -9  -5.06414   TTCCGTTAATAAAAA CGTCCGCAAGCTGCTTGCCG TCGATC CGACAAG--GCTTGCGGACT TCCTAACATCCGTCA 100 82
IRT44_RS15355 NONE
        pxpB NONE
IRT44_RS15345 NONE
IRT44_RS15340 3128553 .. 3128564 -  -5.8  -4.00038   CATCAGGATGACAAA                GCCA AAAC TGGC                 GGCCAACTGCTGCGT  66 158
IRT44_RS15330 NONE
IRT44_RS15325 NONE
IRT44_RS15320 3124266 .. 3124278 -  -5.5   -3.2327   GGAATCCAGTAGCAA                CGCGA TAT TCGCA                ATGTTCACTTTTGTA  53 179
        brnQ 3122811 .. 3122850 - -20.2  -4.78848   GCGGGAAATATAAAA  CAGGGCGGAAAAAGCAGA ATCG TCTGCTTCTTCCCCCCTG   CATCGCCGTCTTAGG 100 36
IRT44_RS15310 3121384 .. 3121440 -  -3.8   -2.5337   AAAAAATACAGATAT TCACATCCTGCCGATC-CGCCGCACTT GCCTGA AAGTGCAGCGCGGGCGGC-GGAC-CGA TGCGAATGTGCCTCA  42 38
IRT44_RS15305 3120122 .. 3120142 -  -9.7   -4.7173   GAGCACATGCAAAAA            GGCTTCCCC TGT AGAGAAGCC            TTTTTCGTATCATCC 100 43
IRT44_RS15300 NONE
IRT44_RS15295 3118812 .. 3118838 - -12.4  -5.14563   CCGCCCAGCAAAAAA         GCGTTTTGGC TTCTATC GCCAAAACGC         TTTTTCTTTGACGCT 100 47
         def 3116697 .. 3116724 - -15.6    -3.481   CAATGGAAACAGCAA        GCCGTGCTTCTC GCAT GAGAGGCACGGC         TTTTTTGCCGGCGAC 100 81
IRT44_RS15275 3115378 .. 3115405 - -12.1  -5.63504   AACGTCATAAAAAAA        CGGTTATCCCG TCTGGG CAGGATAACCG         TTTTGTACCATGACT 100 76
IRT44_RS15270 NONE
IRT44_RS15265 3113379 .. 3113400 -  -5.1  -3.19425   AATCAATTTGAGCAA           GGCCACA-TG GCA CAGTGAGGCC           CTGCGTCCGTGTTTG  53 109
IRT44_RS15260 3111619 .. 3111642 - -11.1  -5.59879   CATAAACATAAAAAA          GAGGGACAT TTTTAC ATGTCCCTC           TTTACAGATCGATTT 100 70
IRT44_RS15255 3110774 .. 3110788 -  -7.8  -2.84999   ACCAAAGCCAGTACA               GACGCG ACT CGCATC               CTTATTTTTCTCATC  56 42
IRT44_RS15250 3109909 .. 3109919 -  -5.4   -2.5655   CCCACGGATACCAAT                 CAAC GGG GTTG                 TAGGCATGCTGAAGC  47 225
IRT44_RS15230 NONE
IRT44_RS15225 3102827 .. 3102855 - -11.1  -4.62069   CGTGCACGCGAAAAA       TCCCGG-CCCTT TTGAAT AAGGGTCCGGGA        TTTTTTCAATTAACA 100 55
IRT44_RS15215 3101360 .. 3101376 - -10.8  -4.92385   CACACGCAAAGAAAA              GGCCCC TGTCC GGGGCC              TCGTTCATCCAGTTA 100 59
IRT44_RS15210 3100927 .. 3100948 -  -7.3  -5.67529   AAGGAAAAAGAAAAA           GAAGGCTAA CCAT CCAGCCTTC            CTATTGTTCCTGCTC 100 26
IRT44_RS15205 NONE
IRT44_RS15200 3098228 .. 3098249 -  -9.4  -4.04806   TTCCATACGAAAGAA           GGACGCCC GGTTGG GGACGTCC            ATCCTCAGGAATCAG  77 37
IRT44_RS15195 3097102 .. 3097115 -  -3.1  -2.83271   TGACCGGGATAATTA               CCGAGA GCA TC-CGG               CTGTTTCTTGCCAGC  41 74
IRT44_RS15190 3096294 .. 3096328 - -18.6  -3.49618   CGTTTACAGAATGAA     CCACCGCCGCCACCCC GAT GAGGTGACAACGGTGG     TACTGGCACATGGAC 100 47
        deoD 3095438 .. 3095461 - -13.2  -4.72201   CCGCAGAAAAAAGAA          TCCGCAGACA TATT TGCCTGCGGA           CAAAAGTTCTTCCTC 100 56
IRT44_RS15175 3091267 .. 3091286 -  -9.2  -5.29782   GACAGTCATAAAAAA            TGAGGGGG AGTT CCCCCTCT             TTTTTGCGTTTATCG 100 41
IRT44_RS15130 3077962 .. 3077995 -  -6.2  -5.72616   ATGGATAGAAAAAAA    GACAACGC--GCCC-TA CCG TACGGGCAAGCGTTGTC    TTTTTTCATGCGGCT 100 56
IRT44_RS15120 3075082 .. 3075106 - -17.2  -4.92783   AAGTCATCATAAAAA          CGGCTGTCCG ATTGA CGGACAGCCG          TTTTCTTGCCAGTGA 100 73
        xerS 3071238 .. 3071267 -  -7.1  -3.52652   TCCATCCAAGCACAA       CAGGTCCGAAC GCCAGCAT GGCCGGACCTG        TTTTTCATGCCGCGC  62 104
IRT44_RS15060 3064395 .. 3064420 -  -8.2  -6.02919   TGACAAATAAAAAAA         CGGCAGGGCC AGTGCA AGCCTTGCCG          TTTCTTGTTCGCGCT 100 57
IRT44_RS15055 3062940 .. 3062970 -  -3.9  -3.86897   GGTATGGCGTACAAA       CCGGATATCGACG ACGTG CGCGAATCTCCGG       GATTGCAAGTATACG  57 336
IRT44_RS14925 3033082 .. 3033100 -  -6.6  -3.07043   CCGAGTATTTCAATA             CCGACCTG ACC CTGGTCGA             TTGGCTGCGTCAGTA  52 518
IRT44_RS14885 NONE
IRT44_RS14880 NONE
IRT44_RS14875 NONE
IRT44_RS14870 3022038 .. 3022050 -  -6.3  -3.08798   ATTTTTGACGCAACA                GTGAT TAT ATCAC                ATTGCGTTGATAAAT  53 87
IRT44_RS14865 3021010 .. 3021039 - -15.9  -5.50499   TCATAGGCAAAAAAA       CAAGCTGATCTCA TTCA CGAGATCAGCTTG        TTTGCCTGTTTACGC 100 35
        leuC NONE
        leuD 3009592 .. 3009621 - -18.7   -4.8048   TGGTCACATGAAAAA       GCGAAGGCACGGA GTGC TCCATGCCTTCGC        CGGTTTGCGTGGATT 100 40
IRT44_RS14705 2983590 .. 2983618 -  -7.5  -4.24002   GCTGAAACGGTAAAA        GTCTCCTGTCA GGGCAAG TGACAGGAGAA        GGGGAGCGTAGGTGT  74 77
IRT44_RS14625 2966735 .. 2966751 -  -5.1   -3.6502   CACCCTGCAGCCAAA              CGACTCA CGG TGATTCG              GGGATACGGCGAAGC  56 92
IRT44_RS14385 2927615 .. 2927631 - -10.9   -5.8187   GATTCAAGAAAAAAA              GAGGGAT GTC ATCCCTC              TTTTTTTCGTTTCGC 100 17
IRT44_RS14300 2913623 .. 2913655 - -13.6  -4.62471   CGCAAGTGCGAAAAA      CAAAACCTCCTTGG TTCGT CCAAGGAGGTTTTT      GTTTTGAGTGAGGGT 100 72
IRT44_RS14290 2911218 .. 2911243 - -11.9  -4.77165   TCCTGTACAATAAAA         CAGCACCTAGC GGTT GCTAGGTGCTT          TTGCTGTTCTTACAG 100 35
IRT44_RS14250 2903821 .. 2903838 -  -4.1  -3.56644   ACATCTAAAAATAGA             CCCCTAT CGGA ATATGGG              AAGTTCCGGCGTCTT  52 11
IRT44_RS14245 2903464 .. 2903491 -  -6.2  -5.48163   AAAGAAATGAAAAAA        CCCCCCATGTCT CGAG AGGCATGAGCGG         TTTTTTGTTTGTGGG  95 45
IRT44_RS14240 2902827 .. 2902855 - -19.7  -4.19817   CTGATGTATGCAAAA        GCCCTGTGTCTCG GTG CAAGACACAGGGC        TCATCGAAGATCGGC 100 50
IRT44_RS14235 NONE
        serA 2899479 .. 2899504 - -14.7  -4.49906   CAATAGGTAAAGAAA         CGGCCTGGTGC ATGA GGACCAGGCCG          TGTACAGGAGACCAT 100 58
IRT44_RS14225 2898076 .. 2898093 - -12.7   -5.0916   TCTCCAATACAAAAA             CGGCTCC CGCG GGAGCCG              TTTTTTTACTGCCTG 100 58
IRT44_RS13945 2838385 .. 2838413 - -16.1  -4.05788   CCGGCTGAAACGAAA        TAGAACCAGGTCG TCA CGGCCTGGTTCTA        GTCTTCGTCGTCTTC 100 23
IRT44_RS13905 2831916 .. 2831949 -  -2.3  -4.56597   CCGCTTGGCCAAAAA     TACG-TGTCCGGCCTG ATG CAGGCAGGCGAGCGCA     AGATGCCGGTCTATA  66 117
IRT44_RS13740 NONE
IRT44_RS13735 NONE
IRT44_RS13730 2802450 .. 2802474 - -15.8  -3.05596   GATGTTTGCACGTAA          GGCTGTACCC AAACA GGGTACAGCC          TTTTTTCTTTGCCGG  93 65
IRT44_RS13705 NONE
IRT44_RS13700 2798170 .. 2798194 - -15.8  -5.99154   GACCAAACAAAAAAA          CAGGCTGCCT CGTAT AGGCAGCCTG          TTTTACATAAACGGA 100 77
IRT44_RS13680 2794509 .. 2794527 -  -3.8  -4.58283   CAATTTGTGCAAAAA             TGCCATCG AAG CAATGCCA             AACGGGGGACACCTC  70 305
         dat 2789882 .. 2789912 - -17.6   -4.7871   AATGAGCAGTAAAAA       GCAGCGGCTACCCG ATA CGGATAGCCGCTTC       ACTTGCGTAGATTGG 100 64
IRT44_RS13625 2779281 .. 2779306 -  -3.3  -4.46212   CGTCTGACTATAAAA         TG-CTGGCCG GCAGCCG CGGCCAATCA         CCGGGATCGGTTAGT  64 36
IRT44_RS13620 NONE
IRT44_RS13615 2777097 .. 2777132 - -17.7  -3.48593   CAGCCGCCCAGACAA    CAAGCTCTCTGTCGG TTCATT CCGGCAGAGAGCTTG     TTTTGTGTGCGCCGG 100 6
        modA NONE
        modB NONE
IRT44_RS13575 2770481 .. 2770530 -  -5.6  -4.90013   TAAGCGAATGAAAAA GCCGTGCCATTCCGGCCGCCAGCC AAAA GGC-GGAGGAGCGAA-AGCACGGC TTTTGTCGTGTCCGT  76 71
IRT44_RS13560 2768734 .. 2768744 -  -6.8  -4.13767   TTCTGGAGGCGAAAA                 GCAG CGG CTGC                 GGCAGCGGGGGAAGC  71 65
IRT44_RS13545 2765828 .. 2765865 -  -9.1  -4.65895   GGGCGCATGCAAAAA   GCCGACCCTCATCCCGT ATCG ACGGGACAAGCATGGGC    CGGCTTTCCTGTGTC  90 39
IRT44_RS13520 2761430 .. 2761450 - -11.2  -3.59979   CCCCTTGACGTGAAA            CAGAGAGG GGATG CCTCTCTG            TAGACGTGTGCGCTC  79 64
        ftsW 2760184 .. 2760203 - -12.2  -5.09225   ATCTCACGTAAAAAA            CGACCTGT CGAT ACAGGTCG             TTTTTTTATGGGTTG 100 58
        sleB 2757210 .. 2757242 -  -9.1  -3.01712   TGGTCGGCGGCAACA      CTTACAGGCACGG ATGATGA CCGTGCCTGTTTG      CTTTCCGTTACCGGC  63 33
         cax 2755641 .. 2755659 -   -11  -4.58786   AGCAAGAAGAAGAAA             GCTCGGCA TGA TACCGAGC             TTTTTCATTATCCAT  95 91
IRT44_RS13480 2754189 .. 2754208 -  -9.3  -5.60993   CTTTCTATAAAAAAA            GACTGCC GCATCG GGCAGTC             CTTGCCTGCAGACAA 100 95
IRT44_RS13450 2747147 .. 2747168 - -15.9  -4.57755   ATCCATCATAGAAAA           GCCATCCGC CGCG GCGGATGGC            TTTTTTTGATGCGGC 100 140
IRT44_RS13435 2743771 .. 2743787 -  -2.2  -2.64155   GCTTGTGCAAACGTA              TTGGGC AATTA GCGCAA              AAAAATTCGTCACTC  39 61
IRT44_RS13430 2742090 .. 2742126 -   -14  -3.04517   ATTGCTTGCGAAAAC   GAAAAGCTTGCGGTTCCT CAC AGG--CCGCAAGCTTTTC   TTTGTGAATAGACGC  86 119
IRT44_RS13420 2739435 .. 2739459 -    -7  -5.04222   GAACGAAACGAAAAA          GCGCGCTTCC GCCGG GGAGGCGGGC          GAACCCGCGGACCGT  90 171
IRT44_RS13410 2738631 .. 2738664 -  -7.5  -5.08011   AAAACGTCTAAAAAA     GAGAGGCAGGCGAT GCTCTTT ATCGCCTGCC-CTT     TTGTGCCGTCCCGTG  91 52
IRT44_RS13380 NONE
IRT44_RS13375 NONE
IRT44_RS13370 2732479 .. 2732492 -  -3.9  -2.56715   ATTTTGACGAACCGA               TGTTT GGAT AAACA                GGGGGCGACGAGCCT  43 51
IRT44_RS13355 NONE
IRT44_RS13350 NONE
IRT44_RS13345 2729179 .. 2729211 - -13.6  -4.98255   GTCGAAGTACAAAAA     GAGGATGAG-GAGCA ATTG CGCTCTCTCATCCTC      TTTTCACTTAATTCT 100 33
IRT44_RS13335 2727032 .. 2727042 -  -6.8  -3.20723   CGTGGACGAACGGAA                 CGTG TTT CACG                 CAGACCGGCGCCGTT  58 203
IRT44_RS13315 2724730 .. 2724743 -  -5.9  -3.18383   ACCTGTATGTACGAA               CAGGC GGGC GCCCG                GTTTCAGAAGGACGA  55 46
IRT44_RS13310 2724244 .. 2724261 -  -9.9  -5.04385   TACATTGGCAAAAAA             TCGTCAG GATG CTGACGA              GCTGTGAGATGATGC 100 211
IRT44_RS13250 2709978 .. 2709989 -  -5.8  -2.54896   TGCTCATCCAACGGA                GCGA TCTG TCGC                 CTTCTGTGACGGGTA  45 488
IRT44_RS13240 2708394 .. 2708406 -  -4.8  -4.89477   CCTTGAAGAACAAAA                CGGT GACGG ACCG                TTACGGCCGGCCGGT  80 242
IRT44_RS13230 2704550 .. 2704573 -    -3  -3.29584   TCCATAAGAAAATGA          TTTCCAGGCC GAAA GGCCTGACCA           TTCATCAACCGAAGC  46 313
IRT44_RS13225 2703766 .. 2703806 -  -8.2  -2.73994   ACCGTGCCAACATCA CTCGGGC-GGGCGGTATCA TCAT CGGTACCGTCGTGCCCGAG  TCTTTTTTTGGGGCA  59 72
IRT44_RS13210 2697816 .. 2697837 - -10.2  -5.08824   TGTCCAGCGAAAAAA           GAGCCTAG GTTTAG CTAGGCTC            CTTGTTGATGTACGC 100 47
IRT44_RS13205 2696900 .. 2696931 - -12.4  -5.41787   TAAAAAATAGAAAAA      CCTCTGCGTCTCATC AGG GAAGAGACG-AGAGG      TTGTACTCCCGCGGT 100 300
        argS 2695075 .. 2695115 - -16.4  -4.21194   GTTCACCATTGAAAA GAAAAGCCGACG-TCCTGT CACA ACAGGAACGTCGGCTTTTT  TGACGGGTGTATTTT 100 54
        asnB 2685030 .. 2685071 -  -8.9  -5.52384   CCGTCAGGAAAAAAA GAAAGCTCCTCAAGACCCC GTAAGT GGGGTC--GAGGAGCTTTT TTCGTCAGGAACGGA 100 30
IRT44_RS13145 NONE
IRT44_RS13140 2682776 .. 2682791 -  -7.5  -5.80364   AGCGCAATAAAAAAA              GCCGC CAAGAC GCGGC               TTTTTTCATGCACGC 100 41
       yfkAB 2680827 .. 2680837 -  -4.6  -2.62184   TGCCCGTTTAGACCA                 GCGC TTT ACGC                 TGCTTGAAGTTGGTA  44 7
IRT44_RS13125 2680474 .. 2680492 - -11.7  -4.34402   GTCTGTACACGAAAA             GGACGGG GAGCG CCCGTCC             TTGTTCATTATGCGT  95 66
IRT44_RS13095 2674111 .. 2674128 - -12.7  -5.15117   CAAAACGGCAAAAAA             CCCGGCA TACA TGCCGGG              TTTTTGCGCAGGAGT 100 63
IRT44_RS13090 NONE
IRT44_RS13085 2671354 .. 2671377 -  -8.9  -5.54192   AGCAAGCGAAAAAAA          GCCTC-ACCC GGCAT GGGTAGAGGC          TTTTGTCCATTCTTG 100 5
IRT44_RS13015 2657412 .. 2657450 - -19.1  -5.25699   AGCAGAGAACAAAAA   GGAAGAGGGGATAGGAT GTTTG ATCCTATCCCCTCTTTC   AGGGTATCTATGCAG 100 275
IRT44_RS13005 2655114 .. 2655143 - -14.4  -5.34555   TCACAGCAGAAAAAA       CCCCG-CGGATGT TCATC ACATCCGGCGGGG       TTTTGTTGTGTCATC 100 119
IRT44_RS12965 NONE
IRT44_RS12960 2647632 .. 2647650 - -14.6  -3.09131   AAAACTACGGCAAGA             GCTCGAGG TCT CCTCGAGC             TCTCAGTTTGCAGAC  86 351
IRT44_RS12950 NONE
IRT44_RS12945 2644873 .. 2644884 -  -5.8   -3.9712   GCAGCGGAGGAGAAA                CGAG CTGG CTCG                 GGAATCATGCCGGAA  66 397
IRT44_RS12940 2643176 .. 2643211 - -11.9  -3.91352   ACATCGGCAAGCAAA    GAAGCATGTTTCCGC GTTTCG GCGGAGCCATGCTTC     TCGAAAGAGGTTGTT  86 115
IRT44_RS12935 NONE
IRT44_RS12930 2640592 .. 2640617 - -11.9   -5.0133   GATCCTGGCAAAAAA         TCTCCTGCGTT AAAA AGCGCAGGAGA          TTTCAGGCTTGTAGA 100 366
IRT44_RS12920 NONE
IRT44_RS12915 2636681 .. 2636704 -  -2.4  -2.51966   TCAAATTGTACGAAT          TGTTTGGTCA ATTT TGCCGAAACA           GGAGAAACAACTGCA  38 9
        ugpC 2635414 .. 2635436 -  -4.9  -4.58236   TACAAAACAGGAAAA          GGGAGTGCCT GCAA AGACA-TCCC           TTTTTTTCTCTTTTT  68 46
IRT44_RS12905 2634499 .. 2634548 -  -5.1  -5.42862   AGACTCGCAAAAAAA CTCACTCCCTCCATGCTGTA TAGACATAGCG TGC-GCACGGAGGGAGTGAT TATGACGGAAAAAGC  91 85
IRT44_RS12900 NONE
IRT44_RS12895 2632368 .. 2632419 -   -14  -3.38514   CGTAAATCAAACACA GCCCTCCCGAGGCAGACAGGCACG-GA TCA TCTCGTGCC-G-CTGCC--GGGAGGGC TTTTAGCGTCAATTC  88 52
IRT44_RS12865 2625328 .. 2625349 - -10.9  -5.95539   CCCCAAACAAAAAAA           CAACTCCCT CGAA AGGGAGCTG            GTGATGGTTGGCTGC 100 43
IRT44_RS12860 2624635 .. 2624660 -  -6.8  -4.34947   AAGACATGATCAAAA         CCGGC-GGGGA AAACG TCGCCAGCCGG         GAAGTAGAGGAATTG  74 467
IRT44_RS12845 2621591 .. 2621614 - -11.7  -4.07568   GCCTCCTTCGCAAAA          CCCCCGCCA GAGGCA TGGCGGGGA           TTTAATTCATACTGT  90 27
IRT44_RS12840 NONE
        istA NONE
        istB 2618812 .. 2618825 -  -3.7  -2.66098   AAGACCTCAAAGGCA               GCCCG GGGA CGGTC                GGGTATGTGCTGATT  42 503
IRT44_RS12820 2616805 .. 2616835 - -18.2  -2.57564   TCAGCGCTGCAGAAC       GACCCGGCTGCCCG CTG CTGGCCGCCGGGTC       CATTTTTTTTTTGGA 100 331
IRT44_RS12785 2609039 .. 2609055 -  -2.1  -3.56092   GGACCACGTCGGAAA              GGGGCTG CTG CAGCCGT              TGTTTGCCGCTCTGG  47 234
IRT44_RS19345 2608110 .. 2608138 -  -8.9   -3.9534   ATGTATATGTATAAA       GCCCCTCACTAC GACCAG GCAG-GAGGGGC        TTTTGACGCCCCTTA  75 38
IRT44_RS12770 NONE
IRT44_RS12765 2607279 .. 2607300 - -11.5  -4.87665   GCCGATTGAGAAAAA           GGGAGCCTG TACA CGGGCTCCC            TTTTCATTGTTGACG 100 44
IRT44_RS12695 2598013 .. 2598025 -  -9.1  -3.29461   GAATTCTTGTCAGAA                GCGTC GCC GACGC                ACCTGGGCGGCGGCA  63 143
IRT44_RS12535 2566674 .. 2566695 - -11.6  -3.29511   TTCATTTTTGGACAA           GGAGCCTC TGTAGC GAGGCTCC            TTGCTGTTTTTCGTT  76 52
IRT44_RS12525 2564743 .. 2564764 -  -8.6  -5.64274   GTATCGACAAAAAAA           CGGCCCGC TGTCCG GCGGGTCG            AAAAACGCTGCGGTC 100 39
IRT44_RS12510 2560303 .. 2560335 -  -8.3  -2.52464   TCGCCGTGGAACTGA      CCCGCAGCATCGG CGGCATT CCGGCGCTGGGGG      CCTTGTTTACCGTAT  53 265
        rpsT 2534218 .. 2534240 -  -9.1  -5.40004   GACCAAAGCAAAAAA           CCCGTGAAC CAGGT GTTCGCGGG           TTTTTCTGATGTACC 100 49
IRT44_RS12355 2528358 .. 2528381 -  -6.7  -4.18197   ACGCGTGATTGAAAA          CGGGCAG-GT CGTGT ACGCCGCCCG          GTTTTTCGGACGGGA  71 78
        asnB 2526233 .. 2526265 - -17.7  -4.72386   CAAACCATTGAAAAA      CGGCCCCGCCCGAAG CAT CTTTGGGCGAAGCCG      TTTGGTCAGGTGTTG 100 44
IRT44_RS12345 NONE
       comER 2524357 .. 2524381 - -17.2  -3.03624   GCATCAACCAAATGA          GGCGCGTTCC GGCAG GGAACGCGCC          TTTTATTTGGTGTCA 100 38
IRT44_RS12275 2511195 .. 2511222 -   -17  -3.22886   ACGCGATACAACAGA        GGCGTCCTTCCC AATC GGGGAGGACGCC         GTTTCATTGTGCGGC 100 61
IRT44_RS12260 NONE
IRT44_RS12255 2506688 .. 2506719 - -19.5    -5.055   GGAACCTGTAAAAAA      CGCCCTCCGGC-GG TTTGT CCAGCCGGAGGGCG      TTTGTCGTGTTGCAT 100 80
IRT44_RS12230 2501210 .. 2501225 -  -4.6  -4.99035   CGATCGATACAAAAA              CTGGTC GGTC GACCTG               ACTCACAAAAGAACA  76 191
IRT44_RS12215 2499491 .. 2499512 - -11.5  -5.04385   GACACGCGCAAAAAA           GCCGCCGAA ATCA TACGGCGGC            AGCTAGCGAAGATGG 100 28
IRT44_RS12210 NONE
IRT44_RS12205 2498387 .. 2498403 -  -9.4  -4.77216   AACAACACGGAAAAA              CCTCCC GCGGG GGGAGG              CTCATGTCATTTCGT  91 32
IRT44_RS12200 2497346 .. 2497375 - -19.5  -3.01791   ACTTTGCCTGCAACA       CGAAAACCCTTGC ACCT GCAAGGGTTTTCG        CTGCGATTATCGGAC 100 32
IRT44_RS12195 2496625 .. 2496649 - -12.9  -5.11836   ACACGGAAAAGAAAA          GCGGCCATC CTTTGCC GATGGCCGC          AGTCTATGAACTGTA 100 73
IRT44_RS12180 2493610 .. 2493624 -  -2.1  -4.18401   TCACACACTTGAAAA               CAGAT GAAGT ATCCG               GGGTCATTGCCATGA  59 336
IRT44_RS12170 2492715 .. 2492736 -  -2.9  -3.75332   AGCCTTTAAGCCAAA           GTGACGC CCCGGAAC GCGTCGC            CGGGGCTGGAAAAGG  52 51
IRT44_RS12165 2492215 .. 2492238 -  -2.4  -5.86061   CGGGAGCAAAAAAAA          GCAGCATT CACGTGAT AACGCCGC           CGCCCTCGACCTTTT  95 146
IRT44_RS12160 NONE
IRT44_RS12155 NONE
IRT44_RS12150 2490075 .. 2490085 -  -3.2  -3.55563   ATTGCAGGTTTCAAA                 GGAA TTC CTCC                 TTAAAATCGTAAATG  49 26
IRT44_RS12145 2489157 .. 2489167 -  -2.4  -3.18264   GGTTCCACTCAGGAA                 TCGC GCA GCGT                 CGTTCCGGTCAACGC  42 8
IRT44_RS12140 2487922 .. 2487955 -  -9.7  -5.26316   TCATGGTATAAAAAA     CCGGTAAC-ACTCG TTTTTCG CGAGTTGTCACCGG     TTTTTTCAAGGCACC 100 43
IRT44_RS12135 NONE
IRT44_RS12130 2485048 .. 2485059 -  -3.6  -4.02302   CGGACATCAAAAACA                CGGC GGGA GCCA                 AACACCGCGGCTGCG  60 504
IRT44_RS12120 NONE
IRT44_RS12115 2482398 .. 2482428 - -12.8  -4.93318   TACAATGCAGAAAAA       GGATGTGATTGA TTTTCTG TCAATCACATCC       TTTTTCTCCTACCTG 100 34
IRT44_RS12110 2482055 .. 2482083 - -14.6  -4.17906   AATCAAATTAAATAA        GCTGACGCCAGT CGAGT ACAGGCGTCAGC        ATGCGGCCTAACGGC 100 109
IRT44_RS12095 2480419 .. 2480449 - -11.9   -4.1552   GACGCTGTCAACAAA      CG-GAGGCTGCCTG TATT CAGGCAGCCTTTCG       TTTGCTCCGATGGAA  95 217
IRT44_RS12050 2469913 .. 2469933 -  -8.2  -5.50499   TGACAGCCAAAAAAA            TGAGGCGC CTGCT GCGCCTCG            TCGTAACCGAAGGAA 100 218
IRT44_RS11995 2457199 .. 2457229 - -18.4  -3.16689   AAAAGTCCATGAAGA       CAGCCCGAACGG TCCACTG CCGTTCGGGCTG       CTTTTTTGCGGTTAC 100 37
IRT44_RS11960 2451742 .. 2451766 - -17.2  -3.63627   TGCCCAGACCGTAAA          CGTTCCCCCG GGTGG CGGGGGAACG          AGCGATCAGGTACGG 100 31
IRT44_RS11940 2447649 .. 2447692 - -17.1  -3.59698   TGACTGCAGACATAA TGATACAAAACCCACTACCA GCTTT CGGTAGTGGGTTTTGT-TCA TTCATCATTCAGGCT 100 30
IRT44_RS11905 2439056 .. 2439094 -  -6.8  -4.90266   CGGACGAACGAAAAA  CCCCCTTG-CTGTTTTC TCCATG GAAAACGGACAAGGGGT   CTTACGCTTATCCTC  82 33
IRT44_RS11900 2438129 .. 2438149 - -11.2  -5.40072   GGTTGCTGAAAAAAA            CCCGTTTG CCTTT CAAACGGG            TGCAGTGGCGTCGTC 100 17
IRT44_RS11895 2437086 .. 2437102 - -13.7  -3.75115   GTCTGAGAAAACGAA              GCCGAGC CTA GCTCGGC              TGTTTGTGTTTCAAT  90 16
       spoVB 2425295 .. 2425345 -  -7.5  -4.09215   GACACCAAGGACAAA CGGCAGCGTTAACGTACCAAGGCG TCAG CGCCGTGGCA-ATCAGCGCCGCGG GAAAAAGATGGCCAA  71 14
IRT44_RS11830 2422899 .. 2422926 - -12.1  -4.14739   TCATCCACGCGAAAA        CATCCGGCTACC TCAAT GGT-GCCGGATG        TTTTTTACGTTTGCT  95 113
IRT44_RS11775 2412320 .. 2412359 -  -7.7  -3.64487   GGAGACCGTGAACAA  GCCGTACCAGCTGGTGC TGGCTC GCACCTACCTGTGCGGC   GTAAAGGATGAAGAA  66 437
IRT44_RS11765 2409953 .. 2409976 - -13.2  -5.79595   GGGTAAAAGAAAAAA          GCTGACGGCA CGGA TGCCATCAGC           TTTTTTCGCGTTACT 100 36
IRT44_RS11720 2401828 .. 2401849 - -13.1  -4.72272   TTTTGGGAGCAAAAA           GTATGCCTG ACCA CAGGCATAC            TTTTTTTGCTGTGCC 100 44
IRT44_RS11600 NONE
IRT44_RS11595 2379648 .. 2379673 -  -3.1  -3.07222   AGTACTACGGGAATA         CGTCGGCGG CCACCATT CCGCTGGCG          CTTTCACTGGGCATC  43 199
IRT44_RS11555 2368638 .. 2368659 -  -4.4  -3.07104   GGAGAAGGATATAGA           CCGGTTGA TGCGGC TCAACCGC            TGGGTTCAGCAGGCC  48 103
IRT44_RS11510 2357522 .. 2357553 - -11.6  -3.78902   GAAGCAACAGCGAAA      GCCC-CCGTCCGA ACAGCTG CCGGACGGAGGGC      TTTCTTTCGTTTTAT  82 37
IRT44_RS11495 2354370 .. 2354387 -  -5.5  -3.53091   ACGGGCTGCGGCAAA             CCGCCGGC GGT GCCGG-GA             ACAGAGAGGGCGGTC  56 56
IRT44_RS11490 2353188 .. 2353244 -    -6  -2.96157   GCCATAAAAAATTCA CCCCTTAAAGTA-ACATCGG-TTTTCCC AAG GGGTTTTTCCAATGTCTACTTTAAGGGG TGCACTCTAATTGCG  52 64
IRT44_RS11485 NONE
IRT44_RS11480 2352008 .. 2352029 -  -3.5  -5.14477   TAGACACTTAAAAAA           CCCCCGGCC GTTA GGCCGCATG            CTGACGCCTGTACTC  78 14
IRT44_RS11440 2342751 .. 2342776 -   -14  -5.15117   GAAAATGTGAAAAAA         CGGGACTGGC ACAAAA GCCAGCCCCG          TTTTTTTATCTGTCA 100 48
IRT44_RS11385 2329152 .. 2329177 -  -8.2  -3.15249   GACAGCGCGCACGAA         TCCACGCCCG AATCGG CAGGCGTGGT          TTTTTGCTTGCGGCA  62 47
IRT44_RS11370 2325598 .. 2325614 -  -2.9  -3.79419   TTCGCTCATAAAACA              CGCCG CCCCTTC CGGCA              GAGGAGGGATGGATT  52 66
IRT44_RS11365 2324825 .. 2324838 -  -2.3  -4.11216   GCTGGACGGGGAAAA               GCAGC GGCT GGTGC                CGATCGAGGGGGCGC  59 339
IRT44_RS11295 NONE
IRT44_RS11290 NONE
IRT44_RS11285 2305341 .. 2305371 - -17.7  -5.46698   TGGAAAAGGAAAAAA      CGGGGTGCTT-GCC ATTG GGCCAAGCACCCCG       TGTCTATTATTCCTT 100 107
IRT44_RS11265 2300603 .. 2300632 -  -4.8  -5.07107   GAAATGCGGAAAAAA       GGGGGCCCGGGT CAATGC ACTCGGCCTCCC        TTTTTGCGCTATTTC  80 170
IRT44_RS11260 2298843 .. 2298853 -  -8.2  -3.72576   TTCTCCGTCACCAAA                 CCGG AAA CCGG                 AAACACCGTGACGGT  66 520
IRT44_RS11240 NONE
IRT44_RS11235 2295053 .. 2295077 - -18.7   -4.2074   TTGTCAACACACAAA          CGGGAGAAGAG CAA CTCTTCTCCCG          TTTTGTATCGATTCT 100 47
IRT44_RS11230 2293191 .. 2293246 - -17.7  -4.25104   CCGGTGTCATGAAAA TCCCTTCCTTTCCTTCGGCGTATAC TATGAT GTATTCGTCGGCGGAAAGGAAGGGA ACGGCGGTTGCACAT 100 83
IRT44_RS11225 2292487 .. 2292506 -   -15  -5.31275   CCTGACGACAAAAAA            GCGGGAGC CACG GCTCCCGC             TTCCCAACTTTTCCA 100 101
IRT44_RS11195 2286618 .. 2286628 -  -5.4  -4.40963   ATGTTGGAAAAACAA                 GTGA TTG TCAC                 CCTTCCCCAAGGGCT  72 309
IRT44_RS11125 2273628 .. 2273654 - -13.1  -5.00616   GGTCTGGCGAAAAAA         TCCGTTAACGC TCCGG GCGCTAACGGA         TTTTTTGGGGGATTA 100 38
IRT44_RS11070 NONE
IRT44_RS11065 2258993 .. 2259028 - -19.2  -3.61902   GGGGATGACAGACAA    CAGGCGTGCAAACC GTTACTGT GGTTTGCACGCCTG     TTTGCATGTCGGTAT 100 92
IRT44_RS11045 2254883 .. 2254904 -  -5.7  -3.53224   GATGTTTGCGGGAAA           TCGCGTGGC AGCG GCAGCGCGA            TGCCTCGCCTCCCCG  59 79
IRT44_RS11035 2252173 .. 2252203 - -10.4  -5.14985   CGAAACAGACAAAAA       GGCTGACGCCTG ACGGGAG CGGGCATCAGCC       TTTTTTACGTGTGTC 100 39
        csaB 2239041 .. 2239056 -  -5.4  -3.10498   CAACTGGGAAGAAAC              GGACAT CTGC ACGTCC               TCCTTTCGTCCGCGT  51 88
IRT44_RS10970 2238063 .. 2238105 - -23.6  -4.25256   GCGGCATGAAAACAA GGGCTGTACCGTAAACGGAA CAC CTCCGATTACGGCACAGCCC TTTTCTCTGTCTGTC 100 115
IRT44_RS10960 2234743 .. 2234769 -  -2.3  -4.09739   CGAATTGGTGCAAAA        GCTGCGCAGA CGGTCTAC TCC-CGCAGC         AAACCGGTAAGCGGA  55 13
IRT44_RS10950 2231803 .. 2231818 -    -4  -3.17325   ACGGCTGACAATACA              CCATTGC GGC GCA-TGG              ACTCACCACCTTTTC  46 28
IRT44_RS10945 NONE
IRT44_RS10940 2228996 .. 2229054 - -10.6  -5.49234   ACACTCAATAAAAAA CAGTTTGTCTTCAGTCTGAGAG-GCGA TGAATT TGACTCTTTCAGAATGAAGACAAACTG ATTGTACCGAAGGAG 100 351
IRT44_RS10930 2225730 .. 2225761 - -19.6  -3.61089   CGGTAATAAGTATAA      CAAACGCCCGAACG TCTG CATTCGGGCGTTTG       TTGCCGTGTTTCCAG 100 46
IRT44_RS10925 2224683 .. 2224711 - -13.8  -3.43919   GTGAAACGGCAAACA        GGCAGGCGCGCT GAGGA AGCGTGCCCGCC        TTGCTGTTGGGGGAA  84 55
IRT44_RS10880 2214229 .. 2214254 - -14.8  -5.10208   CAACCGTAATAAAAA         GAGCCAACCC GACAAG GGGTTGGCTC          TTCGCTCACGGACGT 100 45
        sspI 2206190 .. 2206215 - -16.9  -4.19817   GTGACGCACGTAAAA         CGGGAGAGACG ACAG CGCCTCTCCCG          CTGGTCCAAGCGTCC 100 41
IRT44_RS10720 2180113 .. 2180141 - -18.2  -5.52384   CCGGCAGCAAAAAAA        CACGCCTCGCAG CAGCT CTGCGAGGCGCG        TCTTTCATTACATGA 100 53
IRT44_RS10715 NONE
        gerQ 2179082 .. 2179112 - -18.5  -3.82202   CAGTTGTAAACAGAA       CACAACCTCATCC CTGGC GGATGAGGTTGTG       CGGTGGAGCAGTCGT 100 45
IRT44_RS10640 2164365 .. 2164397 -    -2  -5.28831   ACGAAGAAAACAAAA      GACGACACTTTTCG ATAAG CGAAAAGCATAGTA      CAATTCCTAGTATGT  78 146
        bluB 2162964 .. 2162982 - -10.2  -3.90112   TCGGGTTGAAGGAAA             CCCCCGGA TTG CCCGGGGA             GGGTGCCGCTGACGC  82 331
IRT44_RS10615 2156311 .. 2156334 -  -4.5  -4.20367   TGGGCCAATAAACAA          GCACAACTC TTTTAC GGGCTGTGC           CCACGACATATGGAG  63 76
IRT44_RS10610 NONE
        istA NONE
        istB 2153251 .. 2153282 -  -8.1   -4.2528   GTTGAATTTAATAAA      CCCAAGAATGTTGG TATTT CCG-CATTCTTGGG      CTTTTTTCATTGTTT  76 234
IRT44_RS10585 2150675 .. 2150703 -  -9.6  -4.33621   GATTGAACGAACAAA       GGCGG-CCCGCATC ATG GA-GCGGATCCGCC       ATTACGTGGACGTGT  83 60
IRT44_RS10565 2146402 .. 2146438 - -10.9  -3.69154   GAAGAAAGAAGAAGA   CCCCGCCCGGCGCAGTG TCAGG CAC-A-GCCAGGCGGGG   TTATTATGTGACTCA  80 38
IRT44_RS10530 2137809 .. 2137852 - -10.2  -3.21912   GCCGGAAGCGATGAA GACCGTCCGCTCACCGGCGAG GTG CAAGGCGATGAGCGGA-GGCC AACAGCCGCAAGCGA  68 64
IRT44_RS10520 NONE
IRT44_RS10515 2136550 .. 2136589 - -18.9   -2.5294   GAGGCGGCACAAGAG  CAGCAAAAAGCAGCAGCC TGAGC GGCTGCTG-TTTTTGCTG  GATTTTCGACGCACT 100 41
        ytvI 2121319 .. 2121335 -  -5.1  -5.59357   AGGACACGAAAAAAA              GGAGG AATGGCG CCTCC              TTTTTACGTGCCCTT  95 29
IRT44_RS10385 2105919 .. 2105952 -  -2.4  -6.02919   GCATAAACAAAAAAA    GGACAACCG--TCGGC ACCT GCCGCTTCGGTTGTCT     GAAGCAAGAATGTCA  95 137
IRT44_RS10365 NONE
IRT44_RS10360 NONE
IRT44_RS10355 NONE
IRT44_RS10350 2096730 .. 2096751 -    -5  -4.14633   CATGGGTAAAAAACA           TGCCGGCC TCAATC AGCCGGCG            ATTTAGCTCCTCGAT  66 28
IRT44_RS10345 2095773 .. 2095800 - -14.9  -5.28683   ATCAACACGAAAAAA        CGTGACCGCCC GTTTTG GGACGGTCACG         TTTTTCATGTAAGCC 100 54
IRT44_RS10320 NONE
IRT44_RS10315 2092427 .. 2092458 - -15.9  -5.40625   ATAGGAGAGAAAAAA      CACAAGCCCGGGC GGGACA GCTCGGGCTTGTG       TGCGTTGGGGAGATT 100 46
        nhaC 2077802 .. 2077836 - -10.6  -2.63623   GGCGTTAAAACAGAG     CGCCGCACCGGAAGAC AGC GTCTACCGCTACGCCG     GAGACGAGTTCATGC  62 287
IRT44_RS10195 2063344 .. 2063379 - -20.6  -3.88498   GTGGCACATACGAAA    CACAAGCCGTGCTCCC AATG GGGAACACGGCTTGTA     TTTTTGCGTCCGTGC 100 47
        trpS 2056135 .. 2056158 -  -7.4  -5.82172   ACGAACATAAAAAAA          CAGGCTGTCC CGAA AGACAGCCTT           TTGGCAGGGGAGTGT 100 59
IRT44_RS10150 2054224 .. 2054257 - -18.2  -2.93393   TCGGATGCCAGAAAC     GTCACCCCCACCGG GAAGCT CCGGTGTGGGTGAC      TGTGTTAGCGGACAG 100 45
IRT44_RS10125 2049305 .. 2049315 -  -4.6  -3.45571   TTCTGGAAACAGGAA                 GCAC CGT GCGC                 CATCCCCCACTGCGC  52 80
         gnd 2044201 .. 2044227 - -22.4  -3.74224   GCGAAACCATGCAAA         CAGGCCCGAGGT GCT ACCTCGGGCCTG         GCTGTTTTCTATTTC 100 34
IRT44_RS10070 2037215 .. 2037252 - -12.7  -3.18507   AAGAGAGTGCATGAA   GACAGTCCAAGACGGTG CTTT CCCCGTTTTGGCCTGTC    TTTTTTGTCGGGGAA  81 81
IRT44_RS10055 2034835 .. 2034865 -   -14  -3.86903   GAGACAAGCAAAATA       CCCTTGACCCGCCA ATC CGGCAAGCCAAGGG       CTGTATGGGTGCGGG  93 55
IRT44_RS10050 2033376 .. 2033393 - -12.7  -3.57144   GTCTTCAGTCTGAAA             CCTCCCG AAAA CGGGAGG              TTTCAGTGCTGATTG  83 57
IRT44_RS09790 1980175 .. 1980202 - -12.8  -5.43487   AAAGCACATAAAAAA        GAGAAGGCATTC TCAA GGATGCCTTCTC         TTTTTATGCGCGGTG 100 138
IRT44_RS09780 1978648 .. 1978664 -  -2.2  -3.04263   AGGCGATCGTCAAGA              TAACGC CCAGC GCGATA              AAGCCGATCGAAGCC  42 3
IRT44_RS09775 1977858 .. 1977903 - -19.2  -4.36914   CCGCGGCTTACAAAA GCAATGCCCCAAACC-CCCTG ATCAG CAGGGAAGTTTGGGGCTTTGC TTTGCCACAATTTCC 100 84
IRT44_RS09760 NONE
IRT44_RS09755 NONE
IRT44_RS09750 1974527 .. 1974541 - -11.4  -5.00616   TTTTCGCCCAAAAAA               CCGCTG ATT CAGCGG               TTTTTTTCGTGCATC 100 83
        fdhD 1965688 .. 1965721 - -16.1  -3.95073   CCGCACATGCACAAA     GCCCTTGGTATTGCC TACT GGCAACAACAAGGGC      TGATGAGTTTGATAC 100 120
IRT44_RS09695 1962585 .. 1962612 -  -9.2  -4.62302   CAACAGCCGCAAAAA        GGGCGTT-GTGTT TCA AGCACGAACGCCC        TTTTTGTGCATGGGT  90 87
IRT44_RS09680 1960633 .. 1960650 -  -8.3  -4.24432   AAATGCAAAACGAAA             GCGCTGC AACA GCTGCGC              ACGCGTCTGCAGCAT  74 404
IRT44_RS09665 1959641 .. 1959655 - -12.8  -2.94411   ATGGGTGGAAAGAAT               GCCCCG TCG CGGGGC               TACTTTATCTTTTTG  78 25
IRT44_RS09660 NONE
IRT44_RS09655 1958548 .. 1958574 -    -8  -3.77302   TCAGGACAAAAGCAA         CCGCACCGAT GTCGGCA ACCGATGCGG         TTTTACGCATGGATG  70 71
IRT44_RS09650 1956964 .. 1956997 - -13.9  -4.31293   CTACACATGAACAAA     GCCCTTGGCATTGCC TACT GGCAACAACAAGGGC      TGATGAGTTTGATAT 100 76
IRT44_RS09645 1955765 .. 1955799 - -19.5  -2.54801   CATTCGCAAAGATAG     GAGTCCTAGGAGGAA TATTT TTCCCCCTAGGACTC     TAACTACTCACCAAA 100 33
IRT44_RS09640 1954289 .. 1954309 - -12.6  -4.96848   GCCGCGACAGAAAAA            CCGGACCA GTCAA TGGTCCGG            GTTCCGTTTGTAGAC 100 231
IRT44_RS09630 NONE
IRT44_RS09625 NONE
IRT44_RS09620 1949928 .. 1949951 -  -9.6  -5.35224   GGCAGAAAAATAAAA          GGGGAAGC TGAAAGAG GCTTCCCC           TTGGCTTGTTTTTAT 100 37
        istA NONE
        istB 1946733 .. 1946744 -  -4.4  -3.08133   CATGGAGCGACTCAA                CGAA GAAA TTCG                 CCGACGAGAACGTGT  48 284
IRT44_RS09545 1933354 .. 1933384 - -15.4  -4.57569   CGACTGTCGTAAAAA       GGGAAAGGCCGGGG GTT CCCCGGCCTTTGCT       ATACCGATTAGTTGG 100 33
IRT44_RS09450 1910135 .. 1910153 -   -16  -3.83998   TGAGTGCAGAGGAAA             CCGGACGG GTA CCGTCCGG             TTTTTTGCGTCTGTT 100 53
IRT44_RS09405 1900276 .. 1900302 -  -5.2  -4.69622   ACAGAATTGCAAAAA        GACGG-CCGCTC TGCGT GA-CGGACCGTC        TTTTTGTTTGGCATG  73 56
IRT44_RS09380 1892354 .. 1892366 -  -3.3  -4.51097   GCAAGCAGGACAAAA                GCTTC TAC GAGGC                GTTGTGGCGCTCCTT  66 331
IRT44_RS09345 NONE
IRT44_RS09340 1882275 .. 1882291 -    -3  -4.00756   CATTTCATGAAAGAA              GAAAAC GTGCT GTTTCC              CATGGCGGAAAACAT  58 173
IRT44_RS09235 1872271 .. 1872300 -  -9.4  -5.30155   TGACCAAGGAAAAAA      TCCACCTTGC-GCC AATC GGCTGCA-GGTGGA       TTTTTTGTTTCCCGT 100 40
IRT44_RS09215 1867865 .. 1867886 -  -7.3  -4.70879   GCTAAATGCTAAAAA           CCCCTGA TGAAACTT TCAGGGG            TAATCTGGTCATCGT  82 34
IRT44_RS09185 1862735 .. 1862754 -  -3.5  -3.34398   CCTTGCCGTCAAACA            TGGGCGA AAACCA TCGCGCA             AACATGATGTTCGTG  50 81
IRT44_RS09180 1862042 .. 1862066 - -14.3  -4.66537   GTCCTCAACACAAAA          GGGCACCCG TGTCTAT CGGGTGCCC          GCTTTTTCATTACCC 100 13
IRT44_RS09150 1855829 .. 1855852 - -18.2  -3.18571   GTGCGCAAATACAGA          GGAGCGGGGT CGTG ACCCCGCTCC           AGTTTTGTTGCCAAA 100 90
IRT44_RS09130 NONE
IRT44_RS09125 1851449 .. 1851481 -  -9.2  -5.93809   CGCGCATAAAAAAAA      GCGCATTCGTCTGT GGTAA ATAGAGGAATGCGC      ATTAATTTGCATTTG 100 41
IRT44_RS09120 1846639 .. 1846665 - -19.6  -5.00884   ATGTGTGGTAAAAAA         GCACTCTTCCCA TAG TGGGAAGAGTGC         GAGTGTTTTCAGGAC 100 81
IRT44_RS09115 1845730 .. 1845762 - -17.9  -4.96646   GGATATAAGGAAAAA      GGTACAGCCTCCT TAAAAAC AGGAGGCTGTACC      TGTTCGTGCATGTGC 100 52
IRT44_RS09110 1844736 .. 1844757 -   -13  -3.15999   TGTCTACATACTGAA           GGACCGGC GTTACT GCCGGTCC            AGAAAACGCAAGATT  79 13
IRT44_RS09080 1838687 .. 1838712 - -16.9  -5.34309   ACGAGGAAACAAAAA         GACCGCAAGCG ACAG CGCCTGCGGTC          GGGTATGCGACGAAA 100 434
IRT44_RS09075 1838424 .. 1838435 -  -2.2   -3.4811   CTGCTCATAAGAACA                CCCT CCTC AAGG                 TATATATGCGCGTTA  46 38
IRT44_RS09070 1838108 .. 1838126 -   -16  -4.39386   TGGAAACGATCAAAA             GCGACCGG TGA CCGGTCGC             TTTTTTGCAGGTGAA 100 53
IRT44_RS09055 1835489 .. 1835512 - -13.8  -5.10497   AAGGTATGCAAAAAA          GCGCCTGCCC CTCA GGGCACGCGC           TTTTATTACGGTCAA 100 48
IRT44_RS09040 1832755 .. 1832774 -  -9.3   -5.1971   ATGAAAAATGAAAAA            GCTTGGC CGATGC GCCAAGC             TTTTTGTATTGGTCC 100 77
IRT44_RS09020 1829980 .. 1829993 -  -2.4  -3.87994   ATTTACGTGCATAAA               CACA ATCTCG TGTG                ACGGTGGAGTGCTGG  53 201
IRT44_RS08985 1824351 .. 1824373 - -11.3  -4.88067   ATGTAGCCAGAAAAA           GCCAGAGAC CTGTC GTCCCTGGC           TCAATGTGCGTCGGT 100 40
IRT44_RS08980 NONE
IRT44_RS08975 1822001 .. 1822013 -  -3.4  -3.68827   TATTTATCACGGAAA                GCAA CATGC TTGC                TTACAAGAGATACTG  52 90
IRT44_RS08955 1817539 .. 1817563 -  -3.5  -5.14965   ACTGCCAGGAAAAAA          TAGCGAAGG ATGCCTA CCTGCGCCA          TTACAACAAGCGGTA  78 198
        rlmD 1813348 .. 1813371 - -11.8  -4.84274   TAATTACAGCAAAAA          GACACGGAAC AGCA ATTCCGTGTC           TCCGTGTGCAGACAA 100 180
IRT44_RS08920 1811064 .. 1811076 -  -6.3  -2.78371   TACACTCGTAATAAT                GATGT TCA ACATC                TGGCAGCCTCCTGAT  51 139
IRT44_RS08915 1810650 .. 1810671 -  -7.9   -3.6502   CAGGGTCTAGTGAAA           GCCACTCCA GCGA TGGTGCGGC            CCGTTCGTTTAACAC  64 43
IRT44_RS08910 1810359 .. 1810385 - -10.8  -5.21709   CTTTACACGAAAAAA         TGGGAGCCTGTG TTG CACATGCTCCCG         TTCGTGGTTCTGCAT 100 110
IRT44_RS08895 1806930 .. 1806963 - -16.2  -5.00616   GTTCCCGTCAAAAAA     CAAGGATCGTTGCGG GATGT CCGCA-CGATCCTTG     TTGATTTTTCCGCAA 100 126
IRT44_RS08880 1804630 .. 1804656 -  -7.9  -4.92239   GCAAAAAGCGAAAAA         CGTGCTTCCTC TGCAC GAGGCGGCACG         TTTTTCCAGTCGAAT  87 43
IRT44_RS08865 NONE
IRT44_RS08860 1800240 .. 1800269 - -11.5  -4.13995   TCTTTATAAAGCAAA       CGTTAGGAGAGGGA TAA TCCCTCTCCTT-CG       TCATTCCTCGAGAAA  91 26
IRT44_RS08840 1796688 .. 1796714 -  -7.9  -4.13206   ACCAGGAAACAACAA         GCGGCACACCC TAATG GGGTGTGCCTT         CGTTTTTCTCGTACG  74 9
IRT44_RS08820 1790777 .. 1790800 -  -6.7  -4.88736   GATGATCGACAAAAA          TGCCCAATC GTTTAT GATTGGGCG           TTCAGCGTGTAGACA  82 440
IRT44_RS08810 NONE
IRT44_RS08805 1788961 .. 1789005 -  -5.4  -3.81488   CTGCTTGAAAGAGAA GGTTAGGGGGCCGGCGCCCC TCATG GGAACGCCGGTCCGCTTGTC AACGGCTTTGACGAG  61 24
IRT44_RS08795 1787782 .. 1787802 -    -9  -4.13271   TATACAACAAGCAAA            GGCAAGCG TCGAC CACTTGCC            CAATCCTGCGTTTCA  78 211
IRT44_RS08775 NONE
IRT44_RS08770 NONE
IRT44_RS08765 1780780 .. 1780808 - -14.7  -5.04249   CGCGTAAAAAAGAAA        CAGGCTGTCGA AATGGCA TCGACAGCCTG        TAGTTTTATAAAACC 100 55
IRT44_RS08750 1777793 .. 1777810 - -14.1  -3.53622   ACATAAAGTGAAAGA             GCCGGCG GCAG CGCCGGC              TTATTGTTTGGCTAT  89 37
IRT44_RS08735 1776807 .. 1776830 - -13.2  -4.25104   CCGTCGGTACCAAAA          CAGCCGCCTT GTAT AAGACGGCTG           TTTGAGAGACAAGCG 100 45
IRT44_RS08725 NONE
IRT44_RS08720 NONE
IRT44_RS08715 1772949 .. 1772976 - -15.6  -3.11955   AGAACCATGACGGAA        GGCTGTCCGACA AGAC TGACGGACAGCC         TTTTTATCTGAGTTC  93 29
IRT44_RS08670 NONE
IRT44_RS08665 NONE
IRT44_RS08660 1761974 .. 1761987 -  -2.3  -4.65895   CGCTCTATTGAAAAA               GCACC TGCA AGCGC                TATGGTCAAACTCCC  65 292
IRT44_RS08640 NONE
IRT44_RS08635 1760652 .. 1760675 - -15.3  -4.65838   CATATACGGGAAAAA          GCGCCGCTG ATGGCA CAGCGGCGC           ATGTTCTCGTCAATC 100 35
IRT44_RS08630 1760229 .. 1760250 -  -6.5  -3.39327   TCGGTATACGTACAA           CGGCGGGAA AAGT TTCCCGGCA            AGGGGGCGGCTGATC  60 71
IRT44_RS08625 1759052 .. 1759066 -  -2.1  -5.08824   CCTGTACGGAAAAAA              GCAGCT TGTC AGC-GC               ACGCCCAGCAGGTGC  74 19
IRT44_RS08620 1757472 .. 1757500 - -16.1  -4.72272   TGTCCCCATGAAAAA        GCCGGCATCTG TCACATG CAGATGCCGGC        TTTCGGTCGTATGCT 100 42
IRT44_RS08600 1752086 .. 1752104 - -11.7  -4.39571   CGTATAAAGGCAAAA             GCCCCTC ACTCA GAGGGGC             TTTCGTTTGCCTGGA  95 12
IRT44_RS08595 NONE
IRT44_RS08590 1750691 .. 1750720 -  -3.4   -5.5604   CTAACCAACAAAAAA       TCGCCGGGTGGG TCAATT CTAAACCGGCGA        TGGTGGGTCAAAATA  86 33
IRT44_RS08575 1747943 .. 1747961 - -11.7   -4.1585   GGACAATCGGCAAAA             GCCCCTC ACTTG GAGGGGC             TCAGACTGAAGACAA  95 491
IRT44_RS08560 1745687 .. 1745699 -  -7.7  -4.62069   GCCTCACCCCAAAAA                GGTGA CCG TCACC                GGACATACGGACAAC  83 329
IRT44_RS08535 1741516 .. 1741542 - -10.2  -5.00616   GCCTGGTCCAAAAAA        CTACGCCTCCC TGTGCG GGGAGGCGT-G         TTTCCATGCTGGCGG 100 44
        solA 1740104 .. 1740114 -  -2.4  -2.57881   CAATTTGTTCAGAAG                 CGGG TCA CTCG                 AAACAGGGACAGGTC  39 8
IRT44_RS08495 NONE
IRT44_RS08490 1732541 .. 1732551 -  -2.4  -4.57073   GATTTGCGGGAAAAA                 GGAG CGC CACC                 TCTGAATGGGCTGCA  62 257
IRT44_RS08460 1728438 .. 1728472 -    -7  -5.52384   GGGCTATTAAAAAAA     CCAAAACCGGGCAGCA AAA CGCTGTCCGGTTCAGT     CTGTAAACAAAGTCT 100 99
IRT44_RS08450 NONE
IRT44_RS08445 NONE
        speB NONE
IRT44_RS08435 1722266 .. 1722306 - -14.9  -4.17048   TCGCCCGGAAAACAA GGAGGCTGACATC-TCCG GATGCA CGGAGGATGTCAGCCTCA  TATTCTCTCGTGGCT 100 111
IRT44_RS08425 1719920 .. 1719954 - -19.5  -2.87344   GACTTCGTCTACACA    CTGACAGCCGG-TTGC CAAG GCAATCCGGCTGTCAG     ACTGAAGACAAACCG 100 315
        istA NONE
        istB 1675932 .. 1675945 -  -3.1  -4.44667   CCCTGTAAGAATAAA               TAGAC CTAA GCCTA                TCATTTGACTCCTTG  64 297
IRT44_RS08250 NONE
IRT44_RS08245 NONE
IRT44_RS08240 NONE
IRT44_RS08235 1672048 .. 1672070 -  -4.9  -4.91429   AAACTTGAAAGAAAA           GATACAGTC AACTA AACTGTACC           TAATTTAAGGGGAGA  76 25
IRT44_RS08220 NONE
IRT44_RS08200 1664621 .. 1664656 - -11.2  -4.46155   TACAGACGGACAAAA    CAGGGACACGCTTTCTC ATT GAGGA-GCGTGTCCCTT    TTTGTTGCGCGGGAA  95 314
IRT44_RS08175 1659117 .. 1659139 - -16.3  -4.04149   CAACGAGACGACAAA           GGCTGCCCC CATAC GGGGCAGCC           TTTTTGCTGCTCCAG 100 169
IRT44_RS08140 1648715 .. 1648740 -  -4.6  -5.52384   CCGGCACCAAAAAAA         GGGCGCCC GTATTCCGTG GGGCGACC          CTTTGTCTGCTTTGC  87 67
IRT44_RS08135 1647918 .. 1647939 - -13.1  -4.27584   AGCGGTAAGGGAAAA           GGAGACTCA TTGA TGAGTCTCC            TTTCAGTTTGTAGAC 100 220
IRT44_RS08115 NONE
IRT44_RS08110 1643422 .. 1643440 - -11.7  -5.14563   GCGCGCAGCAAAAAA             GTCCCGG GATGA CCGGGAC             TTCAATTCATTCCGG 100 45
IRT44_RS08105 1642048 .. 1642070 - -10.5  -5.83822   CAGAGGCAAAAAAAA           TGCGCCTGC TGTGC GCAGGCGCC           GGAAAGCGGGTTATT 100 36
IRT44_RS08075 1635895 .. 1635925 - -15.5  -5.24129   CGCGTGCACAAAAAA      GCCCGGACCAGACC AAAT GG-CTGATCCGGGC       ACAGCATCGGCAGTG 100 42
IRT44_RS08070 NONE
IRT44_RS08065 1634131 .. 1634160 - -10.7  -5.41143   GAGCGTGTAAAAAAA       GGCGAGCTTGC GCATCAAT GCAGGCTCGCC        AGTTGTTTTTTGCCG 100 10
IRT44_RS08020 1625215 .. 1625231 -  -2.2  -3.30124   GCGGAGGTCCGACAA              GTGACA TGGGC TGTCCC              TCCTAGGAATAAGTT  44 28
IRT44_RS08015 1625069 .. 1625101 -   -10  -5.44119   TGTATGGCAAAAAAA     GGGAGAT-CCGTC CGGTTATT GACGGTATCTCCC      TTTCTTCTTGTTCGC 100 8
IRT44_RS07950 1610658 .. 1610690 - -17.8  -3.05384   TCCGTCTGTATGCAA     GCCAAGCCCCGCCAC ATGC ATGGCGGGGCT-GGC      TGATTGGATGAACGC 100 142
IRT44_RS07945 1609094 .. 1609107 -  -4.5  -2.88544   TGGCAGGCGCAGACA               CCTGC GGTC GCAGA                CTGAAGACAAACGAT  47 386
        istB 1564516 .. 1564537 -  -2.9  -3.55181   GAAACCGAACCAGAA           GTGGGTCAC CGAT GTTACCCAG            TTTCGTGTAGGAGAT  49 480
IRT44_RS07525 1532279 .. 1532316 -  -2.5   -5.0133   GACTGGGCTAAAAAA   GGGCAAACGGGACGGGA GAAC TCCCGTCCTTATTGCTT    GAGCGTGAGAAACGT  70 17
       abc-f 1524615 .. 1524635 -  -7.5  -3.34715   CAGCGTTGGGAAAGA            CGGAGGAGC AGC GCTGCTCCA            CATCCTGACCTTGCT  62 171
IRT44_RS07440 NONE
        cmpA 1516642 .. 1516669 -  -5.5  -5.81412   TGCACGCAAAAAAAA        GCGGCCTCT GCTTACTCCA AGCGGCCGC         CGTGCTTTTCCAAAT 100 9
IRT44_RS07365 1505628 .. 1505653 -   -12   -5.2189   TTAATCAGGAAAAAA         GCGTTGAATC AAGAGA GATTCAACGC          TTCAGCGTGTAGACA 100 378
IRT44_RS07245 1481719 .. 1481732 -  -3.7  -4.42619   CAATATTCGACAAAA               CCCGC CCAA GCCGG                ACCTGACGTGTTCAG  64 114
IRT44_RS07230 1478766 .. 1478790 - -15.8   -5.0916   CCTGCAATAGAAAAA          CAGCGAAGGG GAACT CCCTTCGCTG          TTTGATGCAAACGAA 100 109
IRT44_RS07220 NONE
IRT44_RS07215 NONE
IRT44_RS07210 1474529 .. 1474542 -  -4.5  -4.07568   GTTTTTCCGGGAAAA               CGCTC GAAT GAACG                GCAGCTTTCCTCTAT  61 147
IRT44_RS07205 1473116 .. 1473134 - -14.6  -5.00027   AGGAAAAATAGAAAA             GCACGGCA AAA TGCCGTGC             CAGACTGAAGACAAA 100 417
IRT44_RS07175 1467255 .. 1467283 -   -14  -4.59109   CAGACCGCCTAAAAA       CTCCCTCTTCTGC AAGC GCAGA-GAGGGAG        TTTTGACACATTTGC 100 263
IRT44_RS07140 1458932 .. 1458960 -  -7.4  -5.77988   ACAGAGACAAAAAAA        CATCCCCCTTCC GCGGG GAAAGGGGGACT        CGCATCCAAGCGTCA 100 38
IRT44_RS07125 1455585 .. 1455637 - -20.8  -3.08046   GCGGCATGTGAAAAT GAAAACAGGGACCGCCTCTTCCTCC CGTG GGAGAAAG-GGCTGTCCCTGTTTGC TTATGGACGTGGAAG 100 49
IRT44_RS07120 NONE
IRT44_RS07115 1454600 .. 1454618 -    -3  -3.53012   GGTGCCCCGGGCAAA             CGCTACGC CCT GCCCAACG             CGGAGATGATGATTC  49 329
IRT44_RS07085 1450136 .. 1450148 -  -4.7  -3.62046   TGACGTCTGCAAGAA                CCTGG GTT CCTGG                CATCCCTCATTGTAA  54 197
IRT44_RS07080 NONE
IRT44_RS19325 1449596 .. 1449622 - -12.3  -4.89852   CGACAGTTAGAAAAA         CCCTGGCCG TTTGCCGTT CGGCCAGGG         TTTTGTCATACATGC 100 49
IRT44_RS07060 1446237 .. 1446262 -  -4.5  -5.53991   CATTGACCAAAAAAA         TTGGCCGGGAC TGCT GTCCCGGCTTT          CGGCGGCGGATTACG  91 36
IRT44_RS07050 1444509 .. 1444519 -    -4  -3.36518   GCAAAATTTGTACAA                 TTTC GTC GAAA                 AAACCATCCTGCAAA  50 176
IRT44_RS07040 NONE
IRT44_RS07035 NONE
IRT44_RS07030 1441040 .. 1441082 - -17.3  -3.53012   GGCTGTGTCTGCAAA CGAACATCCCTCTCTT-TCC TGCG GGAGAAGAGAGGGATGTTTG TTGTGGCAAAGATTA 100 38
IRT44_RS07020 NONE
IRT44_RS07015 NONE
IRT44_RS07010 1436188 .. 1436235 - -17.9  -4.15565   CCCATCAGGCGAAAA CGAACAAGCCGGCAGCCCG-TCC ACGT GGAGCGGGCTGCCGGCT-ATTTG CCGTTCGTGGTCTGT 100 73
IRT44_RS06855 1400876 .. 1400923 -    -9  -3.74251   GATAGCGGCATGAAA GGCGACACCCCCTG-GTGCTTGC GAT GCGAGCGGGCAGAGGGTGCCGGC AGTACGGCCTAGTAT  73 34
IRT44_RS06850 1400243 .. 1400256 -  -5.3  -3.53012   CCTTTGTTTTGTAAA               TCTTG ATTT CAAGA                TTATTATCTCTCCGC  56 84
IRT44_RS06845 1399557 .. 1399568 -  -7.2  -4.07687   ATGTTTGTCCGAAAA                GGCC GGCG GGCC                 TTAGAAGGTCTCCGC  71 26
IRT44_RS06840 1399113 .. 1399124 -  -3.6  -2.57243   CGATGATCAGAACAG                GACG TAAG CGCC                 GGGGCCGATCAGGGC  43 5
IRT44_RS06835 1398216 .. 1398240 - -12.9  -5.29716   CGAACATAATAAAAA          GGCCGTCAC TTTCTGC GTGACGGCC          TCGCTTTTGCCGCTG 100 44
IRT44_RS06765 1381036 .. 1381067 -  -9.4  -5.41143   CAGCGGGCAAAAAAA      GACCAGACGCCGAT GAAA ACTGGCCTCTGGTC       CTCAGATGTGCTCGC 100 27
IRT44_RS06760 1380236 .. 1380254 -  -4.5  -3.18274   GCTATCGGAATTCAA             GATGAGG TCCCT CCTCTTC             GAAGATGGTCAATCA  48 3
IRT44_RS06755 1378847 .. 1378859 -  -2.6  -4.41047   AGCGCCGAACCAAAA                CGGC CTGAC GCCA                TGTTCCTGGATACGG  60 193
IRT44_RS06745 1377204 .. 1377238 - -19.3  -3.74077   CCGGACAGACGCAAA     GAGCCTCCACCCGCC GCAAA GACGGGAGGAGGCTC     ACATTTATTTTGCAG 100 131
IRT44_RS06710 1369636 .. 1369664 - -11.1  -4.19238   TTTTCAACGGCAAAA       CTCCCAC-TGCG TTGGAG CGCATGTGGGAG        TTTGTCTTCAATCTG  91 70
        istA NONE
        istB 1366802 .. 1366814 -  -3.3  -3.04398   CCGGTTGTGCAAAAC                GGTGA GTT TCGCC                ATTTCTGTACCAACG  44 269
IRT44_RS06650 1358119 .. 1358149 - -10.4  -4.63486   ATTGCTGTAAGAAAA       GAAGCGAGGGACCC GTG AGTTCCCTCGCTTT       TTGTTTCCGCATCTT 100 68
        pdaB 1348559 .. 1348581 - -14.9  -3.76413   TGGTAAAACGGGAAA           GCTGACCGC TGTCT GCGGTCAGC           TTTTTTCCTTACTTG  95 34
        gerD 1347204 .. 1347228 -  -7.1  -4.47679   AAGGGAAAACATAAA          GGTGGGCTC TTGATCC GAGCTCACC          TTTTTCCTTAGGATT  76 33
IRT44_RS06350 1324723 .. 1324739 -  -3.5  -3.66178   CGGCGTAATCGGAAA              GCGCATG TGG CGGGCGC              GCATCATCGGATGGC  54 325
IRT44_RS06215 1298033 .. 1298050 -  -9.1  -5.41143   GACTGCCGAAAAAAA             CCCGCTC GCAA AAGCGGG              TTTTTTTGTTGAAGT 100 83
IRT44_RS05870 1234934 .. 1234968 - -14.2  -5.32699   GCAAACAGGAAAAAA     CCTGCACCCGTGTGCA CGA TGCGCGAGGGTGCAGG     TTTTTGCTTGTGGGG 100 85
IRT44_RS05720 1202008 .. 1202032 - -11.4  -4.74801   CAAGTCCAGCAAAAA          GCACCCGGTC TCGAC GACTGGGTGC          TTTGTTCTTGCCGAA 100 105
IRT44_RS05665 1193388 .. 1193398 -  -2.4  -4.56597   TCGCCTGGCCAAAAA                 GCTG GGC CTGC                 CGATCATCATTCACA  66 441
IRT44_RS05650 1189897 .. 1189918 - -17.3  -4.62069   TCTTCAGTCTAAAAA           GGCCGGGGA GTCA TCCCCGGCC            TTTTTCGTTTTTATG 100 89
IRT44_RS05585 1179572 .. 1179586 -  -4.2  -2.56164   ATGAGTAATGAATAC               GGGATG GGT CATCGC               CTTGATTGTCACAGG  42 274
IRT44_RS05530 1169649 .. 1169677 - -15.3  -2.66274   TTGCCGAGAACGAAG        CGGCGGGAGTGAA TTG CTCACTCCCGCCT        TGTGTTATGGTATTC  83 43
IRT44_RS05525 1168961 .. 1168985 - -14.3  -3.67588   CAAATCGTACGCAAA          GCACAGGTTGG CAG CCAGCCTGTGC          TTTTTGATTTACTTG  93 367
IRT44_RS05515 1167961 .. 1167987 - -11.6  -5.14563   CTGCGGATGAAAAAA         CAGCCCGGTC AGGATTA AACCGGGCTG         TTCTTCTGGATATGG 100 13
IRT44_RS05500 NONE
IRT44_RS05495 1165383 .. 1165428 - -14.4   -5.5112   TTTACCAACAAAAAA GAGCTGAAAAAACCTTTTTT GGGTGA AAAAAAGATCTTCTCAGCTC ATGCCTGCATTACCA 100 199
IRT44_RS05490 1164398 .. 1164456 - -11.1  -2.80472   GTGTATGAAAAAAGG CATGAACGGGGAAACAATGCGG-CATCG TTTG CCATGTCCGCATGCTCTCACCGCTCATG CCTAGTCGAACTAGT  71 64
IRT44_RS05485 1163787 .. 1163815 -  -5.7  -3.18434   AACAATTTACCAACA        GGGGGCGGGCGTG CAG CCCGCCATTCCCC        GTGATGCTTACCTGA  55 60
        nagE 1162011 .. 1162045 - -12.2  -3.00946   TGCCGTTATAAAGCA    GTCCACCCGGCA-CG TCAGGG CGCTGCCGGGTGGAA     TCGTGCCGTCAGGCG  76 57
IRT44_RS05475 1160997 .. 1161035 - -10.9  -4.82901   GTGCCGTGAGAAAAA   GCGGTTTCCCCAAACGG ACGAG CCCACGGGGGAAACCGC   TTCGTTGTGCTGTCT 100 45
IRT44_RS05460 1159914 .. 1159925 -  -4.4   -3.6761   CCTTTGCAAGAAATA                GAAC ATAT GTTC                 GGTATTGTGCGAAAA  56 94
IRT44_RS05455 1159241 .. 1159263 - -13.4    -4.258   GGACTTACGAACAAA           GCGCCGGACA TTG TGTACGGCGC           TGATTTGCTTGGAAA 100 114
IRT44_RS05445 1158591 .. 1158625 - -10.1  -4.57474   GCAACCCACACAAAA    CGGCCTTTCC-CTGCCA CTA TGG-AGCGGGAAGGCCG    GATGTGCTCAGGCCT  90 33
        pdaA 1157202 .. 1157225 - -12.4  -4.58283   GAACCTGGGCAAAAA          GCCGTCTCTC TGAT GGGAGACGGC           TCAGCATGTAGACAA 100 469
IRT44_RS05435 NONE
IRT44_RS05430 1155841 .. 1155877 -   -19  -4.33819   ATGATTGATAACAAA    CGAAAGCTGGGTATAC TCTCG GTATACCCAGCTTTCA    GATTATAACCAACCA 100 28
IRT44_RS05360 1142085 .. 1142117 -  -6.9   -3.1634   GCTGAAAGCATCTAA      GCGTGAAGCCCCCTC CAA GATGAGACTTCCCAC      AGCGTCAAGCTGGTA  54 233
        rpmH 1123786 .. 1123804 - -10.2   -5.5208   TCACAATACAAAAAA             GGCCACTG TAG CTGTGGCC             TATGCGGAAAGCACT 100 25
        rnpA NONE
        yidD NONE
        yidC NONE
IRT44_RS05270 1121365 .. 1121384 -  -7.9  -5.60993   CCGGGCATAAAAAAA            GAAGCCT ACCGGG AGGCTTC             TTTAGGCGCGATCAC 100 11
IRT44_RS05265 1119721 .. 1119760 -  -5.8  -6.37666   AGAAAACAAAAAAAA  GACCCTCACAACAAGAAT CTGC ATTCTTATTGCAAGGGGA   TAGAGTAATACATCA 100 54
        mnmE NONE
        mnmG NONE
        rsmG 1115333 .. 1115357 -  -7.8  -5.00616   CCCTCTGCCAAAAAA          GGGCCACAGC GTTGT GCCATAGCCC          TCTGGTCTCCAATAA  87 79
IRT44_RS05245 1114487 .. 1114497 -  -6.8  -3.53012   TTCCTGCTGCGGAAA                 CGTG TTT CACG                 TGAAACATCAATTAC  62 33
         noc 1112966 .. 1112985 -    -7  -4.89966   AGAGCCAAAAAGAAA            GGCGGCTG TTGT CCGCCACC             GTGTTCCTGCTTTAC  82 101
IRT44_RS05235 NONE
IRT44_RS05230 NONE
IRT44_RS05225 1109851 .. 1109871 -  -2.4  -3.53012   GCCTTTCCCTGCAAA            GCGCTGCC GCGAA GGCACAGC            CGCCTTCTTATGTTC  47 183
IRT44_RS05220 1108829 .. 1108858 - -11.5  -5.40072   TTCGTTGCAAAAAAA       CCGTCAGGGATATG TTT CGT-TCCCTGACGG       TCCTCTATTTGTGGT 100 128
IRT44_RS05195 1105449 .. 1105487 -    -9  -5.56263   ATCATAAAACAAAAA  CCGAGCATGTTATCAGGG ATTCA CCCTGACA-C-CGCTCGG  CTTTAGCTGGATTAG 100 37
IRT44_RS05190 1104430 .. 1104458 -  -6.9  -5.61596   ATTCTGATAAAAAAA       GACTTGT-TTCC TTACGG GGAATACAAGTC        TTTTTGCTGTTATGA 100 35
IRT44_RS05180 NONE
IRT44_RS05175 NONE
IRT44_RS05170 1101977 .. 1102017 - -11.9  -3.77196   CCATCATTGACCAAA  CGAAAGAGGATGCAACCTG TGA CGCGTCGCATCCTCTTTCC  TTGTGCTCGCTTGTT  85 97
        pepF 1099422 .. 1099443 - -10.9  -3.74077   GTCTACACACGGAAA           CTCCCTTCA CTGC CGAAGGGAG            TTTCTCCTGCACTAA  80 37
        ychF 1097506 .. 1097518 -  -7.7  -3.64466   AGTGCAGATAGATAA                GCATG GGA CATGC                ACTCCATAAATACTC  64 89
        rpsF NONE
         ssb NONE
        rpsR 1096339 .. 1096362 -  -8.8  -5.18561   CAAATATGGAAAAAA          GAGGGCCACA CAAT TGTGTCCCCC           TTTTGCATTGTGTCA 100 42
IRT44_RS05135 NONE
IRT44_RS05130 NONE
        rplI 1092780 .. 1092794 -  -4.3  -3.85698   GCCGTCTTGTAGAAA               TCTTC CGGTC GAAGA               ATCTCGATGGCCGTG  59 160
IRT44_RS05115 1089959 .. 1089976 -  -8.4  -5.85244   AATGAAAATAAAAAA             GCTGCC CGAAAC GGCAGC              TTTTTCGTATGCAAT 100 60
IRT44_RS05110 1089441 .. 1089469 - -11.7  -3.58177   TATAACGCAAATGAA        GCCACCTTCCC TCTCATT GGGCAGGTGGC        TGTATGTTTATACGC  82 50
IRT44_RS05100 1087240 .. 1087265 -  -7.5  -4.95547   TTCACAACAAGAAAA         GGGCTCCTCCA TTTT CGGAGGAACGC          CCTTTTTTGCAATGG  87 46
        yycF 1086404 .. 1086428 -  -6.4  -3.54424   CTGGACCGTGGTAAA         CAGCCGGAGCG GTCT CA-TCCGGCCG          TTCCTCCCAGACCCG  59 15
        walK NONE
        yycH NONE
        yycI 1082384 .. 1082398 -  -2.8  -4.07568   TGCCGCTTGCCAAAA               CACTGA ATC TCACTG               CATATCCCTCTTCCT  56 77
IRT44_RS05075 1081364 .. 1081375 -  -5.8  -3.78022   TTGATAGGCATGAAA                GACG TAAA CGTC                 ATCGCCAAACTGGCT  58 258
IRT44_RS05065 1079815 .. 1079839 - -13.6  -4.18494   GATGGTCACGCAAAA          CGGGTGCCGA TCCGG TCGACACCCG          TTAGGGAAGAACGTG 100 92
         cls 1078160 .. 1078179 -  -4.8  -2.90496   TTCCCCGCGAAAGGA            GGCGGGCC GACC GGATCGCC             AGGTATGGTCCGGAA  47 56
IRT44_RS05055 NONE
        rlmH NONE
IRT44_RS05045 NONE
IRT44_RS05040 1075720 .. 1075739 - -11.4  -4.18294   CAAAGCAAATAAGAA            TGGCGCCC GATT GGACGCCA             GCAGATATTAGTGAG  91 33
IRT44_RS05035 1074631 .. 1074658 - -17.2  -5.00895   TCCAGCATACAAAAA        CGCTACTGACAA CAGT TTGTCAGTAGCG         TTCGATCATTTTTTT 100 17
IRT44_RS05030 1073812 .. 1073835 -  -8.1  -2.75577   TCATTTTAAAAGGCA          TGGCCATCC TTTATT GGATGGCCG           CTTGCATTGCTTTCG  59 191
IRT44_RS05005 1069583 .. 1069623 - -16.4  -3.29263   ACACCCGTGGCACAA GATAAAACTCCCCCGCCAA TTGT TCGGCGAGGGAGTTT-ATC  TGCAATCTTCGGCAA 100 61
IRT44_RS05000 NONE
IRT44_RS04995 1067938 .. 1067975 - -14.9  -5.52384   CCGGCAGCAAAAAAA   CAGCCCCTGTAACGGAC CTTC ATCCGCAACAAGGGCTG    TCTTGCATCACGATT 100 54
IRT44_RS04990 1067524 .. 1067546 -  -6.4  -5.27335   TTGGCCAAATAAAAA           CTGAATAC GGTTGAG GTATTCAG           TTCAGACTAGAGCGT  90 32
IRT44_RS04980 1064959 .. 1064982 -  -2.4  -4.49311   ACGATCATTACAAAA          CGTTGCAAAA AAAT TCCTGCAAGG           TAATGCAGGTTTTTC  62 76
IRT44_RS04975 NONE
IRT44_RS04970 1062682 .. 1062728 -  -5.2  -5.04325   GTGAAACGAGAAAAA CAATGGCTGCCACAGGTT GCTTGCGGCTA AACCTGTCGCAGCCCTCA AATCCCTTGCCCTCT  79 80
IRT44_RS04965 1060868 .. 1060896 -  -4.6  -5.88476   AAAAGAAACAAAAAA       GAAGAGGCATCCA ATCG CGG-TGCCTCTTT        TCAGGCTGATATGCA 100 63
IRT44_RS04960 1060248 .. 1060271 -  -6.6  -5.42265   TGAAAGCAGAAAAAA          GAGCCGCCCC TTGG AAGGCGCCTC           CTTTGTGGAAGTCCT 100 95
IRT44_RS04955 NONE
IRT44_RS04950 1058728 .. 1058751 -   -11  -3.64599   CTATGACATTGGAAA          GAGGTGCCCC CTGC GAGACACCTC           TTTCCTGACGGTCTC  79 78
IRT44_RS04945 1057167 .. 1057204 -  -8.5  -5.54264   AAACACCCAAAAAAA   CTAGCCTTACCCC GGCTTCTGACAA GGGGTAAGGCGAG    TATGTTTGTTTGCGA 100 193
IRT44_RS04940 1055376 .. 1055415 -  -8.1   -5.9873   GGACGACAAAAAAAA  GAACCTTTAATCCGC GCGAAATTTA GCAGATTAAAAGTTC   GAAGATAGGCAATGG 100 61
IRT44_RS04935 NONE
IRT44_RS04930 NONE
IRT44_RS04925 1051518 .. 1051559 - -14.5  -4.33151   CAGCAGAATGGAAAA CCCCTTCCCGCCGTACG TTCGCTTC CATACGGTGGAAAGGGG  TTTTGTCAAATCTTA 100 41
IRT44_RS04910 NONE
IRT44_RS04905 NONE
IRT44_RS04900 1047435 .. 1047458 - -13.2  -4.87626   TGTCAAGACGAAAAA          GCACACCACT CGGG AGCGGTGTGC           TTGTCACAACGATTG 100 493
IRT44_RS04895 NONE
IRT44_RS04890 1043502 .. 1043518 -    -8  -4.30833   GAAACGATCAAGAAA              CCTCCT GATAA AGGAGG              TTTTTTACACCGTGC  79 30
IRT44_RS04880 1041715 .. 1041745 - -19.8  -3.72576   GGGCCTGTGATGAAA       GAAGCCGTGACGCG CTT CGTGTCACGGCTTC       TTGCTGTGTTGAACT 100 52
        fumC 1034640 .. 1034660 - -11.1  -3.36983   AAAAGGCGTAACGAA            GGGGGCACC TGG AATGCCCCC            TGCTTGCTATTCTTT  77 32
IRT44_RS19315 NONE
IRT44_RS04840 NONE
IRT44_RS04835 1030553 .. 1030585 - -17.9  -4.52589   TTTTTTCATACAAAA      GAGGGCATGTTCC TCGCGAT GGAACATGCCCTC      TTTTCTTCGTGTCAT 100 59
IRT44_RS04815 1025556 .. 1025573 -  -9.9  -4.20883   TAAAAAGCCGGAAAA             CGCTAGT TTGC ACTAGCG              TTGATTCCGTTTACC  83 36
IRT44_RS04810 NONE
IRT44_RS04805 NONE
IRT44_RS04800 NONE
        ptsP NONE
IRT44_RS04790 1019737 .. 1019767 - -16.3  -4.81814   ACCACGACAACAAAA       GAACACCCTGTCC TCACC GGACAGAGTGTTC       GCTAGGCCGTAACCG 100 51
IRT44_RS04785 1018123 .. 1018138 - -10.4  -5.28683   ATGAACACGAAAAAA              GCGGGA TTGC TCCCGC               TTTTTTCTTTCACTT 100 50
IRT44_RS04780 1017565 .. 1017597 - -16.5  -2.82623   TTCCTCTTACAACTA      TGGAGGTATCTCTAT ATG AAAGAGATACCTCCA      TTTTTTTCCGTAACT  91 42
IRT44_RS04775 NONE
IRT44_RS04770 NONE
IRT44_RS04765 1013719 .. 1013766 - -10.8  -5.60993   CGCTGCACAAAAAAA TCCTGACCGACGAACGGGTAT GTCAATG ACACCCATTCGT-AGCCAGGA ATTTACGGTTCCTTG 100 246
IRT44_RS04760 1012154 .. 1012184 - -18.4  -3.23853   GGGCCCCAATGAACA       GAGCCTGCCTCG TTTTTGT CGAGGCAGGCTC       AATGCGCTGCGATGC 100 57
IRT44_RS04755 1010565 .. 1010601 -  -4.6  -5.74288   AGAAATAAGAAAAAA   GCAGAGGTGTCGGAAA ACAGGCG TTCCCGA--CCTCTGC   TTTTTAATTTGCCTT 100 87
IRT44_RS04745 NONE
IRT44_RS04740 NONE
IRT44_RS04735 1006708 .. 1006742 - -18.8  -2.78384   TTTTCTGCGACTACA     CGAAATGGCTTCTGCA GGA CACAGAAGCCATTTCG     CACAAGCAGTTCTCG 100 59
IRT44_RS04730 NONE
IRT44_RS04725 NONE
IRT44_RS04720 1003595 .. 1003605 -  -5.4  -3.14211   ACTCCTTCTTACCAA                 TTGG TAC CCAA                 AACGACTTCGCCCCG  51 55
IRT44_RS04715 1002692 .. 1002720 - -17.5  -4.17048   TCTCCGGGAAAACAA        CCAGGCTGCCGAC GAT GTCGACAGCCTGA        ATGATTGCCTGGCAC 100 91
IRT44_RS04705 1000090 .. 1000107 -  -9.9  -5.52986   ATGGTATGAAAAAAA             CTCTTCC TAGA GGAAGAG              TTTGCCAAGTTGCGC 100 247
IRT44_RS04700  998862 ..  998881 - -12.2  -3.93782   CCATTCAACAGGAAA            CCGACTAC CGCA GTAGTCGG             TCGCCGTCTCGTTTA  86 38
IRT44_RS04695 NONE
IRT44_RS04690 NONE
IRT44_RS04685 NONE
IRT44_RS04680 NONE
IRT44_RS04675  993820 ..  993876 - -10.4  -2.96157   GCCATAAAAAATTCA CCCCTTAAAGTA-ACATCGG-TTATCCC AAG GGGTTTTTCCAATGTCTACTTTAAGGGG TGCACTCTATTTCAT  70 61
IRT44_RS04670 NONE
IRT44_RS04665  992207 ..  992229 - -13.5  -5.81412   CCGATGTAAAAAAAA           CGCCCGAAT CTCGC ATTCGGGCG           TTTCAGCGTGTAGAC 100 446
IRT44_RS04660 NONE
IRT44_RS04655 NONE
IRT44_RS04650 NONE
IRT44_RS04645 NONE
IRT44_RS04640  986994 ..  987027 - -14.6  -3.93288   CTGTACCGAATGAAA     CAGCGGCCACGAGG GAGTGT CCTCACAGCCGCTG      TTGTTAGTTATAGTG  93 44
IRT44_RS04625  980788 ..  980808 - -12.7  -5.31545   AAGAATATGAAAAAA            GCTGTTAAC CGT GTTAACAGC            TTTTCCATGTATGCG 100 46
IRT44_RS04620  979865 ..  979875 -    -4  -2.96274   GCGGCCAGAACCAGA                 TTCA ACA TGAA                 AACACCCCCATAATT  45 130
IRT44_RS04615 NONE
IRT44_RS04610 NONE
IRT44_RS04605  977178 ..  977219 - -24.6   -4.0802   AGCGGAACAATCAAA CGCAACAGGGCACCCCTG GACAAT CAAGGGCGCCCTGTTGCG  CTCCCCCGACATATC 100 48
IRT44_RS04600  976307 ..  976317 -  -2.4  -4.47217   AAGGATTAACGAAAA                 CGCG CCT CGCT                 TACTGCTCTCCTGCG  62 25
IRT44_RS04590 NONE
IRT44_RS04585 NONE
IRT44_RS04580  970302 ..  970328 - -10.9  -3.99324   GTCCACTACGACAAA        CCTCCGCGGCTG TCAT CA-CCACGGAGG         TTTGTTGTTTCCCGT  84 59
IRT44_RS04575  969009 ..  969031 -  -4.3  -5.40072   CCGTTCGGAAAAAAA           TTAAAAAAC TTGAT GTTTCTTAA           AGAATCTAACACTAT  87 37
IRT44_RS04570  968334 ..  968356 -  -6.3  -3.69841   TGTCAACAAAGAAGA           GTCTCCC GTCTTATTA GGGAGAC           TTATACATTTAGACT  62 40
IRT44_RS04560  965073 ..  965094 -  -8.7  -5.60993   GCTGCGACAAAAAAA           GACCCGCTT GGAT AAACGGGCC            AGACGTCCAATTTCA 100 46
IRT44_RS04555 NONE
IRT44_RS19310  963490 ..  963529 -  -8.8  -5.40072   TCTTTGCCAAAAAAA  TTACCCCCATATTGAGA GTGTGCA TCTCAATGTGGGGG-AA  GCTGATTTCAGATCC 100 50
IRT44_RS04550  963113 ..  963130 -    -4  -4.66609   CATTGTACTGAAAAA             GCAGGC TGCTGT GCCAGC              GCTCCCTCTGCCGTG  68 67
IRT44_RS04545  962077 ..  962116 - -10.2  -3.48395   AGCCTTGTCATACAA CCGGGAAAGCTGCCGGAC TTACGT GTCC--CAGCTTTCCCGA  CGGGTGCGGGTCCCC  75 44
        istA NONE
        istB  958977 ..  959014 -  -4.9  -5.14563   TCGGTGAGCAAAAAA   GCGAGCGAATACAAATA CCTG TTTTTGTATTCACACCC    GTTTATGGGCCGCAC  80 152
IRT44_RS04515 NONE
IRT44_RS04510  956922 ..  956933 -    -3  -2.61695   GGCATTTCGAAACAG                TTGA ACGT TCAA                 AAGACAGCGAGCCGT  40 72
IRT44_RS04505 NONE
IRT44_RS04500  952359 ..  952412 -  -7.4  -4.90266   GGCATGAAGCAAAAA CCCCCTCCGCG-CACGCTTAAAAAC ACCCG GCTTTCCGGCTTGGCACGGAGGGGA CCTGCCTATTGTTGC  85 64
IRT44_RS04495 NONE
IRT44_RS04490  950360 ..  950381 - -10.1  -5.71712   CTTGAGACAAAAAAA           GGACCGGCA CCAT TGCCGGTCT            TTACTTGCATGCCCG 100 77
IRT44_RS04485  949759 ..  949785 -    -5  -3.06183   GCCATTTGCATGGAA         CTGATACCGCCG CAT CGGCGCAATCAC         GTGTGTCTGGTCGTC  51 88
IRT44_RS04480  948748 ..  948792 -    -3   -4.4727   TTAATAGTGACAAAA TGGTAATGAAAAGCAGCA ATGTCTTTA TACTTCTCATCATTACCA TCACCGCCGAACGTT  64 26
IRT44_RS04475  944730 ..  944777 - -13.7  -4.06182   CCACCCATAAAAATA CCCCCTTGCCTGTTTCTTCCTA TACGG TAGAAAAAGACA-GCAAGGGGG AGCAAGTAAATTTAC  93 37
IRT44_RS04470 NONE
IRT44_RS04465  941806 ..  941828 -    -4  -2.79302   ATCATCCTGAGGACA           GTGTGCCTGA CGC CCAGCCACTC           GTCAGTTCCTCGGTC  44 27
IRT44_RS04460 NONE
IRT44_RS04455  940133 ..  940172 -  -7.3  -5.64274   GTAGGCACAAAAAAA GGCTGTCCTGCACGGCAG AACGAAA CTGCCG-G--GGACAGCC CTCTTTTCCGTCAGG 100 61
        speE NONE
        speB  935999 ..  936023 - -11.4    -5.626   CACCCGACAAAAAAA          CGCCCCCAGT GTGAA ACCGGGGACG          CTTGTGGTACCGTCT 100 42
IRT44_RS04435 NONE
IRT44_RS04430  933798 ..  933837 -  -9.4  -5.47218   TTTGACGCAAAAAAA  GAAGTGACCTCCCCTT GAGTTGAG AACCGGAGGTCACTTC   GGTCAAATTCTGAGC 100 326
IRT44_RS04420  933038 ..  933074 -  -9.5  -4.15044   CTCCTTTCGAACAAA    CTGCCAAAAAATCATCA CTG TGCCGAATTTTCGGCAG    TCACCGCTGCCGTTC  83 26
IRT44_RS04415  931469 ..  931482 -  -3.9  -3.90112   GTCGTGCCAATCAAA               TCAAA AGAT TTTGA                ATATAGAAAATAAAG  57 98
        ablA  929958 ..  930001 - -16.1  -3.64703   TCTCCTCCACGCAAA CAGCCGCCAGAGAATGCCAG CAACC CTGGC-TTCCCTGGCGGCCT TGTCAGCCTATGCGG 100 51
IRT44_RS04405  927619 ..  927643 -   -10  -5.47218   TTTTATGCAAAAAAA          TCCCCACCCT TTGGC AGGGCAGGGA          TTAGCACACCAAAAA 100 53
IRT44_RS04400  926932 ..  926955 -   -14  -4.35483   CGGGACTATAACAAA          GAAGCACCAT ATAC ATGGTGCTTC           TTTCCAAACTACAGA 100 34
IRT44_RS04390  925751 ..  925783 -  -2.6  -5.63374   GTAATACGAAAAAAA      GGACGCCTGACT TTTCTTGTC AGTCCGGCAGCC      ATTCGTTGCCGGACG  84 117
IRT44_RS04385  924441 ..  924451 -  -2.4  -3.27525   CCCGTCCAAACGCAA                 CCGG TCC CCGC                 AGAGACTAGAACACC  44 31
IRT44_RS04380 NONE
IRT44_RS04375 NONE
IRT44_RS04370 NONE
        meaB  920105 ..  920127 -  -4.8  -4.62302   CAACATTTGGAAAAA           GAAAGACCGC AAC GCTCTCTTTC           TATTATATCCCGTAT  70 90
IRT44_RS04360 NONE
IRT44_RS04355  916070 ..  916110 - -16.1  -5.27477   AGCGGAACGAAAAAA  GGCCCGCCTTGCGGAAGCA GCC TGCTTTCGCACAGCGGGCA  TTCGTTTTTACATAT 100 46
        rpoE  912728 ..  912774 -  -2.2  -6.12458   CAAAAAAAGAAAAAA CAAAAGCGGTTCCCACCCCGA TCCAGC TCGGGCAGGGGG-CACTTTTG TTTTGTAGTTTCCCA  95 108
IRT44_RS04335  910987 ..  911016 - -15.7  -4.84017   AATCCTGGACAAAAA       GACGCACCACCGG AGAT CCGAAGGTGCGTC        TTTTTTGTTTGGGTA 100 54
IRT44_RS04325 NONE
         fba NONE
         fsa  907866 ..  907890 - -12.9     -3.94   GTAATCGGGAAAGAA          GCACCTTCCCC AAC GGAAAAGGTGC          TTAGGCCTTTTACAC  87 35
IRT44_RS04310 NONE
        glpX NONE
         rho  904213 ..  904240 -   -10  -6.06723   GGGCCCAAAAAAAAA        TGACGGCA-AGTA AAT TACCCTGCCGTCA        CGTTTGCTTGTTTTC 100 12
IRT44_RS04295 NONE
IRT44_RS04290  901868 ..  901878 -  -3.2  -3.30781   CGAAGCGAAATGCAA                 CAGA CTG TCCG                 CTACGCCATGTTTTT  46 26
        rpmE  901528 ..  901562 - -10.2  -5.40072   TTTTGCGCAAAAAAA    GCAAAAACCAGGCAG TGATCC CTGCCTGGTTCTT-C     TTCCCGATTAGGAAA 100 33
IRT44_RS04280  900794 ..  900807 -  -8.1  -2.66216   CTTCACGAGCAGAAT               CCCTC AAGC GAGGG                CCGCCTTCAGTATGC  58 32
IRT44_RS04275  900006 ..  900024 - -13.8  -3.44255   ACAAGCAGGCAAACA             GGCCCGGC ATG GCCGAGCC             TTTGGACTTAAGACA  84 209
        prfA NONE
        prmC  897791 ..  897813 -  -2.6  -4.57569   GCACTCTCGCAAAAA           CATTACGCGA TTC TAGCGAAACG           TATGCGACTCTGGCA  62 154
      spoIIR  896787 ..  896812 - -11.9  -4.24606   AAGCGATATGCAAAA         CGACACCACGGC GTA ACCG-GGTGTCG         TTATCTTGAAAATCA  95 38
IRT44_RS04255 NONE
IRT44_RS04250 NONE
IRT44_RS04245  894333 ..  894360 -  -4.1   -4.5954   CCATATTATACAAAA        GCAGGCCCTGGC CGACT GCCAGCACCT-C        ATCTCTTCACGATAT  68 52
        rpiB NONE
IRT44_RS04235 NONE
IRT44_RS04230  891550 ..  891573 -  -5.2  -3.32536   AAACGATTTCCATAA          TTTCCAGGCC GGAA GGCCTGCACA           TTCATCAACCGAAGC  53 336
         upp NONE
        wecB  887557 ..  887579 - -13.5  -4.72272   TGCGGGCAGCAAAAA           GGAGGCGTT TGACC AACGCCTCC           TCGTTGAACAGTGCC 100 46
IRT44_RS04205  884193 ..  884233 - -18.6  -4.07746   CGGCCAAAAACAGAA CAAAAGACCGAG-TCTTCC CTCG GGAAGAACTCGGTCTTTCG  TCGACATTCCGATCA 100 42
        bioA NONE
        bioD NONE
        bioB  880709 ..  880727 -  -7.4  -2.70525   TTGCCGCAAATCAAC             CGGGAG GCGGCTG CTCCCG             CTCCCCATTGTTCCG  55 260
IRT44_RS04180 NONE
        bioC  878162 ..  878173 -    -3  -2.93623   CCTTGGAAAACAGCA                TGAA GGTC TTCA                 TCATACAATTCCCTT  42 26
IRT44_RS04170  876772 ..  876790 -  -3.1  -3.00907   TCATACACAAGGAGA             GGGCA GGTGTCAAG TGCCC             CTTTGCCCTCATCCA  42 181
IRT44_RS04165  876543 ..  876557 -  -4.2  -3.12351   TCTCCCTACAGGTAA               CCGC GGACTAT GCGG               TAGACACTGTACACG  48 1
IRT44_RS04160 NONE
        atpB NONE
        atpE  874805 ..  874838 -   -11  -2.96444   TTCCGCAAGAATAAC     GTGGCATCGCCGCGC ACCAG GCGAGGCAA-GCCAC     TATGTTACGCACAAG  73 180
        atpF NONE
IRT44_RS04140 NONE
        atpA  872155 ..  872171 -  -6.5  -2.54702   ACAGATGTCAATCTA              TATCCGC TTA GCGGCTA              ACCGAAAAGCCTTTT  52 16
        atpG NONE
        atpD NONE
IRT44_RS04120  869303 ..  869327 -   -10   -4.8048   CCGCTACAGGAAAAA         TCCCCGCAACC GGGT GGC-GCGGGGA          TATTTGCTTACAGAT 100 33
IRT44_RS04115  868361 ..  868380 -  -7.2  -5.17786   CAATAAAAGGAAAAA            CTTAGAGA AAAG TCCCTAAG             TTTTTCCAATTACAA  91 51
IRT44_RS04110 NONE
IRT44_RS04105 NONE
IRT44_RS04100 NONE
IRT44_RS04095 NONE
        nuoH NONE
        nuoI NONE
IRT44_RS04080 NONE
        nuoK NONE
        nuoL  860229 ..  860249 -  -5.4  -3.39018   GCAGCAGGTGAAACA            GGATGAAG TATTC CTTCAGCC            GTTTTTTGATCTGCC  54 375
        nuoN  857489 ..  857515 -  -8.7  -5.43866   GAATGTGCAAAAAAA        GGGGCGGCCTGT CGTG ACAG-CCGTCCC         CTTTATTGTACCTGA 100 55
IRT44_RS04055 NONE
IRT44_RS04050 NONE
        murA  854906 ..  854930 - -14.4    -5.626   CATGGCACAAAAAAA          GAGACTTCCC GCACA GGGAAGTCTC          TCTTGTCTATTCGTT 100 55
      spoIID  853773 ..  853804 -  -2.1  -3.57309   GAAAATTTGCGCAAA      GCGGC-CCGTCTAG CTTTT CAGGACGCTGCCGC      AGTCCTCCAGCGAGA  47 3
IRT44_RS04035  852862 ..  852893 - -10.2   -5.1361   AGAAAGGCGAAAAAA      GAAACCTGCAGAGA CCCG TCTCTGCAGGTTAT       TTTGCATGTGTTTGT 100 79
     spoIIID  852360 ..  852378 -  -3.1  -4.03179   GAGAGGACAAGGAAA             TTCTTCC TATCC GGAAGGA             AATATTTTCAACGCA  56 52
IRT44_RS04025 NONE
IRT44_RS04020 NONE
IRT44_RS04015 NONE
IRT44_RS04010 NONE
IRT44_RS04005  849118 ..  849156 -  -6.1  -3.50853   GGTTTCCAAGCATAA  GAAGA-GGCCCCTCACC CTGCGTC GGTT-GGGGCCGTCTTC  TGCTGCCACATGTCA  59 49
IRT44_RS04000  848419 ..  848448 - -12.1  -3.11024   GGGGTTAAGATAAAG       GGGCACTTCCTCC ATGC GGCGGAAGTGCTC        TTTTCCATCCGCCTC  77 44
        fabZ  847831 ..  847859 - -14.7  -4.67048   CTACCCGAAAAGAAA        GGCACATTCAAGA AAT TCATGAATGTGCC        TGCTTCACGTCAACC 100 13
IRT44_RS03990 NONE
IRT44_RS03985  845857 ..  845880 - -18.2  -5.16472   AAAAAGCGGAAAAAA          CCCCTGCTGG TCAT CCAGCAGGGG           TTTGCCCGACTAGTG 100 35
IRT44_RS03980  841147 ..  841181 - -18.8  -4.91109   TCTGGACGACAAAAA     CAGAAGCTGAAGAGGA AAT TCCTCTTCAGCTTCTT     TCATTGTTACTGCTT 100 32
IRT44_RS03965  838181 ..  838197 -  -2.2  -3.38378   TCAGACCTCAAAAAG              TTGCGG TGCCT CCGAAA              AAGTTTTTTAATTTT  46 171
IRT44_RS03960  834639 ..  834671 - -14.2  -3.08464   TTACGAGGCATTGAA     TCAGGGAGCAGAGGG GATT CCCTCTGC-CCCTGT      TCATTCCATGCCCTC  86 68
IRT44_RS03955  831028 ..  831059 - -13.1  -4.76193   AAGGATAAGAGAAAA     GCCCCG-GTGGACTC TACT GAG-CCACACGGGGC      TTTCTCGCTTCTTTT 100 75
        istA NONE
        istB  827360 ..  827379 -   -10  -5.64274   TTAGGCATAAAAAAA            CCACTCGA ATTG CCGAGTGG             TTCCCGTTTGTAGAC 100 452
IRT44_RS03925 NONE
IRT44_RS03920 NONE
IRT44_RS03915 NONE
IRT44_RS03910  821040 ..  821070 -  -9.8  -5.19003   AAGAGAAAAAAGAAA       CCCCAAACAAGC ATCAGCA ACTCGTTTGGGG       TCAATAGTAGGTTAT 100 37
IRT44_RS03900  819210 ..  819246 -   -11  -4.72272   TTTGGGCATGAAAAA    GGCTCATTCCTCCTTA TCGTT TAAGTAGGAACAAGCC    TTTTCAAATTAATCA 100 110
IRT44_RS03895 NONE
IRT44_RS03890  817768 ..  817804 -  -6.5  -5.68023   TTAGAATGAAAAAAA    GGCTCACTCCCCCTCAC ATT GCAAGTTGGAATAAGCC    TTCTAAGTTTATTAG 100 225
IRT44_RS03885  816856 ..  816868 -  -4.8  -3.00994   CGAATCTGATAGACA                CGGT CAAAT ACCG                TCTGGCGATTCAACC  47 422
IRT44_RS03875 NONE
IRT44_RS03870  814878 ..  814917 -  -6.4  -5.61881   CCCGAAAAACAAAAA  GAAACCCCAGACGAGTAA TTGA TTACTCGTTTGGGGTAAG   TGTGCTATTGAATCA 100 38
IRT44_RS03865  814176 ..  814211 -  -8.8  -4.67038   TCCGCAAAAGGAAAA    CCGGCGTATGGGACCA CATG CGGCCGCGGACGCCGG     TTCATTTGCTGACAG  90 27
IRT44_RS03860 NONE
IRT44_RS03855  811087 ..  811111 - -12.9  -4.64861   CCGCTGCAAAAGAAA          CAGCCACTCGA TTT CCGAGTGACTG          CCAGACTGAAGACAA 100 383
IRT44_RS03850  809542 ..  809558 -  -5.7  -3.14132   GGCCGCCTCGATCAA              CAGCCGC AGG GCGTCCG              GCTCCGGCTGGTTGT  53 436
IRT44_RS03840  806831 ..  806850 -  -6.4  -3.70511   GACTCAACAGAAAGA            CCCCATCA ATAA CGATGAGG             TTCTTTTCCAACACG  62 46
IRT44_RS03835  805722 ..  805749 -  -2.7  -5.00616   GGGCCGGCTAAAAAA       CAGCAAGCCCCAC GGAA ATGGGGC--GCCG        GGTAAAGGCATCATG  73 36
IRT44_RS03830  804559 ..  804592 - -10.3  -2.62579   CTTCTAAAACAAATT     GAGAGGGCAAAACCT GCGT ATGGTTCGCCCTCTC      GTTTCGACTCAGAGT  68 48
IRT44_RS03825  803424 ..  803462 -  -3.1  -2.71712   CGGGCGGGGTCAAAT  GGCCGCAAGCGATTAAAC GCCC GCTTTACC-CCTGCGGCA   CGCCTACCTTCCAGC  41 12
IRT44_RS03820 NONE
IRT44_RS03815  801295 ..  801323 - -17.5  -3.31511   AACCAAACAGCAATA        CCCCCTTCTGCCA CTG CGGCAAAAGGGGG        TGGTTCTGAAACGTT 100 44
IRT44_RS03810 NONE
IRT44_RS03805  797864 ..  797885 -  -8.8     -6.13   ACATGCAAAAAAAAA           CCTTTTCC GTTTGA GGAAAAGG            TGCTTGTTTTGATGC 100 203
        metK  796533 ..  796552 - -12.2   -5.8187   TATCCAAGAAAAAAA            GCCTAGTG CGTG CACTAGGC             TCTCCCTACTCGGTT 100 42
IRT44_RS03795 NONE
IRT44_RS03790 NONE
IRT44_RS03785 NONE
IRT44_RS03780  793101 ..  793118 -  -8.4  -5.86976   CGACAAAAGAAAAAA             GCGCGT TATATC ACGCGC              TCCCACTCGTCTGTA 100 13
IRT44_RS03775 NONE
IRT44_RS03770 NONE
IRT44_RS03765  789426 ..  789455 - -13.7   -4.9645   ATCATAACAAGAAAA       CCGATGATACTTC TTTA GTAGTATCATCGG        CAAAATACCGGCAAA 100 63
        flgM NONE
IRT44_RS03755 NONE
        flgK  787031 ..  787057 -  -2.8  -2.71144   TACCCTCCCTAACGA         CGTTACAGACCG ACT CGGCCCATGCCG         TTAATGATCCTGTCC  40 1
        flgL NONE
IRT44_RS03740 NONE
IRT44_RS03735 NONE
        csrA  784845 ..  784865 -    -9  -5.52384   TTTTTACGAAAAAAA            CGGACGAT CAGAC ACCGTCCG            TTTTATCCATATGAA 100 12
IRT44_RS03725  783821 ..  783843 - -12.1  -5.64274   TCATTTAGAAAAAAA           GAGAGCAAG AAACG CTTGCTCTC           TTTTTTGTTCGATTA 100 38
IRT44_RS03720 NONE
IRT44_RS03715 NONE
        flaG NONE
        fliD NONE
        fliS NONE
IRT44_RS03695  778098 ..  778113 -  -7.5  -4.61873   CCTTACAAATGAAAA              GGCCC AATAAA GGGCC               TTTCATTTCTTCGTG  82 28
IRT44_RS03690  774139 ..  774166 - -14.3  -5.14563   GGGCGCACCAAAAAA        GAAGCAGCTGA CTCAAC TCAGCTGCTTC         TCACATAGAAACTTG 100 53
        ltrA  772243 ..  772279 -  -4.5  -3.22448   TCAAATTTAATCCAA   TCGAGTAGGA-GGGGGT GGTTA ACCCCCGTCCT-CTCAC   ACCACCGTACGTACC  50 58
IRT44_RS03680  769910 ..  769934 -  -9.3  -5.14477   TATACACGGAAAAAA          GGCCGCTGA TCAACAG TCAGCAGCC          TTTTCCATCTACCAT 100 59
IRT44_RS03670 NONE
IRT44_RS03665  767712 ..  767732 -  -2.4  -3.28924   GACGGTTGTGCACAA            GCTGGGAA TAACT CCCCCCGC            CCCGCGTCCCTGCTG  44 188
IRT44_RS03660  766735 ..  766761 - -12.3  -3.47029   GGATGGAAACAGCAA         CGGGTACGCCA GTGGA CGACGTACCCG         GCCGGTTGCGCTGTT  80 40
IRT44_RS03655  766005 ..  766024 -  -9.3  -3.73414   GAGACCAGAGTCAAA            TTCCCCC TTATTT GGGGGAA             TATTTCTTCTCCAGT  73 13
IRT44_RS03650  765658 ..  765682 -  -8.6  -4.33582   CGTAACAATAAATAA          TCCCCCTG TCCTTGAAC CAGGGGGA          TTCGCTTTCCCGTCA  79 63
        raiA  764804 ..  764832 - -12.5  -4.04174   GTGGATACAAGTAAA        GGGGAGTTGCC AGAAGAA AGCAACTCCCC        TTGGAGTTTATTTTT  91 48
       secA2  762065 ..  762091 - -18.8  -5.93809   CGGGGAGAAAAAAAA         CTGCTCCTCCCG ACA CGGGAAGAGCAG         TTTTGCAAGCTGCGT 100 54
IRT44_RS03635  761298 ..  761311 -  -2.3  -2.76162   CATTGTACCGCAAAT               TGGCG GATT CGCAA                CCGGACAGCATCGAT  39 59
        prfB  759900 ..  759912 -  -6.3  -3.85698   CTCTCCTTTGACAAA                CAGTA TGT TACTG                GAAGTATAGCACAAT  64 248
IRT44_RS03625  759586 ..  759603 -  -4.9  -3.18452   GCTCGAAACAAATCA             TTCTTCCG CTC CGGA-GAA             TCCGTCTAGGTCAGC  50 31
IRT44_RS03620  759132 ..  759152 - -11.8  -5.42198   TGTCAAAAAAGAAAA            CGCCCGGC GATTT GCCGGACG            CTTTACGTACCTGCT 100 39
        argC  757950 ..  757963 -  -3.7  -3.40597   TCCTCTACGGAAACA               GCGGC ACCA GCGGC                AATCCTGTCGCCTCC  50 1
        argB  757128 ..  757143 -  -2.4  -2.62184   GCGGTGTCCACATTA              CGCGCC TTTG GGGACG               CCTGCCTGGATCACG  39 7
IRT44_RS03605  755752 ..  755764 -  -2.6  -3.61103   CAACGGGATCTGAAA                GCCG CGTTC CGAC                TCGCTGCATGGATGT  47 143
IRT44_RS03600 NONE
        carB NONE
        argF  749972 ..  749989 -  -7.7  -5.15381   AACACAGTGAAAAAA             CACCACT AAAA AGCGGTG              TTTTTCCGCGAACAA  91 419
IRT44_RS03585  749279 ..  749303 -  -2.2  -3.68366   GCAGTGTAAAAGCAA         CCAAAACAGGC AAGT GGCT-TTTTGG          CTCCCAATACGGCAG  50 111
IRT44_RS03580  748064 ..  748095 - -14.4  -3.84901   CTGATGAAAAAGTAA      GCAGGAGGCTACCC TATC GGGCCACCTCCTGC       AGATGCCGCTGCGGC  93 7
IRT44_RS03575  747444 ..  747470 -  -9.3  -4.65895   TCTGCCATGCAAAAA         GCCGGACCCCC CTGAT GGTTGTCCGGC         GCTTCCTTACTTGCG  90 32
IRT44_RS03570 NONE
        argH  744405 ..  744435 - -14.8  -5.47218   GCGCACCGAAAAAAA       CGGATAGGAGCCTC ATC AAGGCTTCTATCCG       TTTTTTTTGTCTGTG 100 177
        ltrA  742413 ..  742442 -  -7.1  -4.58395   CTGATGGCGGAAAAA       GCAACG-CCGTTCG GCC CGATCGGCCGTTTC       AAAAAGCTGACCAGC  79 159
        ftsE NONE
        ftsX NONE
IRT44_RS03540  738103 ..  738149 -  -9.5  -2.80522   AGCCGATTGAACAAT CGGGAAGCCCGGAAAG-TGA CCGTGATT CCTTCTTTCCGTGCTTCCCG TTTCTGCGAGAACGC  65 47
IRT44_RS03535  736043 ..  736071 - -10.3  -5.00616   CTCTGTCGCAAAAAA        GGAACCACGGC TTTCTCT GCCGTGGTTAC        CATTTCTACGACTGG 100 70
IRT44_RS03530  734693 ..  734711 - -10.2   -5.4505   GCCGGCAATAAAAAA             CCGCCCGA AAC CCGGACGG             CCGCGCGTAAGCGGC 100 64
IRT44_RS03525  732829 ..  732861 - -14.8  -6.12328   ACAAGACAAAAAAAA      CAGCCGTACCGGCC GAACA GGCTGGTGCGGCTG      TTTGACTTTCGCTGG 100 47
        uvrB NONE
        uvrA NONE
IRT44_RS03505  726048 ..  726078 - -16.2  -3.64466   AGTTCATATACAGAA       GCAGGTCCACTCGC TGC ACGAGTGGACCTGT       TTTTTCATTCGCGTT 100 89
        hprK NONE
IRT44_RS03485  722180 ..  722216 - -16.6  -5.02201   AAAACAGCACAAAAA    GCCCCGGACGCTCTGT TCACG ACACAGCGTTCGGGGC    TTCAGACGAAACAAT 100 51
IRT44_RS03480 NONE
        hisG NONE
        hisD NONE
        hisB  718262 ..  718272 -  -2.4   -4.3898   ATCATCGTCACAAAA                 CCCC TTT GGTG                 GACGGTACGCCTTTG  60 7
        hisH NONE
        hisA NONE
        hisF NONE
       hisIE  715092 ..  715114 -  -5.5  -5.15634   CATTCTAGCAAAAAA           CCACTCCCC GGCAA AGTGAGTGG           TCGGCGTGTAGACAA  83 389
IRT44_RS03440  714539 ..  714559 - -11.1  -4.74103   CCGCCAATCGAAAAA            GGCCCCTGC CTG GCAGAAGCC            CCCATCGCAGCGGCG 100 92
IRT44_RS03435 NONE
IRT44_RS03430  711127 ..  711163 - -11.1  -5.24129   GCCGCCTATAAAAAA   CGGCAAAAAAATCCCG TCCATG CGGAATTTTTT-GCCG    GTTCGCCAATTTTTC 100 56
IRT44_RS03425 NONE
IRT44_RS03420 NONE
IRT44_RS03415  707419 ..  707456 - -21.5  -4.39426   CAGATTGGGACAAAA   GGCGCGTCCCCTCCTGAT TCA AT-AGGAGAGGACGCGCC   TGTTTAGGTTTGCAT 100 50
IRT44_RS03410  705496 ..  705509 -  -6.7  -2.72471   TCGTCACCAGACAAC               GCACA TGAA TGTGC                CAATCTTTACTTTTG  53 107
         rrf  705353 ..  705377 -    -2  -3.45366   TTTTCAAGGAACGAA         GTTCTGCTGCC GTCA GGCAGCCGC-C          TGGCAACGTCCTACT  46 23
IRT44_RS03400  702285 ..  702297 -    -2  -2.89655   TCCGTGAAAAAAACC                TTCA TTCCT TGAA                AACTGGACATGCATG  41 59
IRT44_RS03395 NONE
IRT44_RS03390  702085 ..  702101 -  -2.2  -3.15249   CAGATGCTCTACCAA              CTGAGC TAATG GCTCAC              AATATGGTGGCTCGG  42 30
IRT44_RS03385 NONE
IRT44_RS03380  701884 ..  701909 - -11.9  -3.92804   CAATAAAGCAGGAAA         CACCACTGGCT TTAC AGCGAGTGGTG          TCGTCTATCCGTTGT  86 62
IRT44_RS03375 NONE
        trxB  698898 ..  698920 -  -7.7  -5.75945   ATTCGGTAAAAAAAA          GACGCGGCTG AATG CAGCCACG-C           AAGTATGGTTCGTAT 100 108
        rapZ NONE
IRT44_RS03360 NONE
        whiA  695835 ..  695850 -  -2.6  -2.97245   TTACCGATAAGTATA              CCATGCT GCT AG-ATGG              ATACATTTTGTTTTT  41 18
IRT44_RS03350  695423 ..  695433 -  -2.4  -5.46706   ACGGTAAAAGAAAAA                 GAGG CAC CCGC                 AAAGAATGAAGTTGC  80 126
IRT44_RS03345  694668 ..  694694 -  -3.1  -3.44848   CCGGGTGATGAAAGA        CTCCA-TCGCATG CGG CA-GCGAGTGGAA        GCCTTGCCTGTTTCA  47 139
IRT44_RS03340 NONE
IRT44_RS03335  694222 ..  694240 - -13.1  -2.86164   CCTCGAAGCACGACA             CCCGGCC AGCAA GGCCGGG             TGTTTTTACTTCTCC  77 31
IRT44_RS03295 NONE
        rpoN NONE
IRT44_RS03285  686728 ..  686757 -  -8.5  -3.36112   GTAAAAAACATGCAA       GGTCCCTCAGCCC ATCA GAGCCAAGGGACG        TGTTGCCGGTTACTG  65 35
IRT44_RS03280 NONE
IRT44_RS03275 NONE
         gap  683116 ..  683133 - -11.3  -4.62336   AGCGTATGGGAAAAA             GGGAGAG GACG CTCTCCC              TTTTTTCACAACAGT 100 54
IRT44_RS03265 NONE
        tpiA NONE
        gpmI  679473 ..  679505 -  -8.9  -3.30124   TGTTATGTTGGAGAA      CCCCGCACCAGCCTG GGA CTCGCGGGTGCGGCG      TTCGTCGTTGGCCTG  67 59
         eno  678105 ..  678131 - -19.6   -5.9003   AAACGAACAAAAAAA         GGTGCTTTCCCT CAG AGGGAAAGCACC         TTTTTTGCGTTGCCG 100 50
IRT44_RS03230  673931 ..  673963 - -19.2  -4.58663   ATCACCGGGCAAAAA      GCAGGCTGCCGGGA ATGAA TCCCGGCAGCCTGT      CGCTCTCACTATTGT 100 34
        secG  671480 ..  671502 - -12.8  -5.47159   TCCTAATAGAAAAAA           GACAGCAAGT CAA ACTTGCTGCC           TTTGGCAAACATGTA 100 43
         rnr NONE
        smpB  668081 ..  668115 -  -5.6  -5.67967   ATCAGGAGAAAAAAA     GTCTAGGCGAAGATGG CAA CTGTCCACACCTAGAC     TGTAGTTTCGGGGTT  95 267
        ssrA  667665 ..  667679 -  -7.1  -5.63236   ACGCAAAAATAAAAA               GCACC TCAAG GGTGC               TTTTATTTTTGCGTA 100 41
IRT44_RS03185  664979 ..  665007 - -11.8  -5.50723   GTATTAAAAGAAAAA        GTAGATCACCTG TCAGC CTGGTGATCTAC        TCCGCAGCTAACAAT 100 455
IRT44_RS03170  662161 ..  662177 -  -7.3  -3.84304   TGAAGGGATAAAACA              TCCATCG AAG CGATGAA              CCGGCGGATGGATAA  69 101
IRT44_RS03160  660210 ..  660222 -  -5.5  -2.97925   ATTCCAGACCATACA                GTGCC TCG AGCAC                GAAATTGCCTCCTTT  49 63
IRT44_RS03155 NONE
IRT44_RS03150  657197 ..  657210 -  -2.3  -2.54098   CGCGGGAATCAACAG               GGGAC ACAA GTCTC                ACTTCCTCGAAATAC  38 217
IRT44_RS03145 NONE
IRT44_RS03140  652147 ..  652197 - -16.5  -4.65458   TACACAAACAACAAA CAAGGGTCCATCA-CCT-TGCTG ACACACG CAGCACAGGCTGATGGACCCTCG CTTTTTCCAGCACGA 100 104
IRT44_RS03125 NONE
IRT44_RS03120 NONE
IRT44_RS03115  646019 ..  646042 -  -9.6  -3.93782   TTATCTAACACGAAA          GCCACTCC AATACACA GGAGTGGC           TTCAGTGTGTAGACA  78 344
IRT44_RS03110 NONE
IRT44_RS03105  645284 ..  645319 - -10.6  -4.74103   CTTCCAACCGAAAAA    GAAGCCGAACCCCTT GCAAGTG AAGGGATTCGGCT-C    TTTTTCCAATAATAA 100 58
IRT44_RS03100  643122 ..  643135 -  -2.3   -3.0663   CCAACAACAACCACA               CCAGC ACTC ACCGG                GACTCCTCCTCTCGC  42 19
IRT44_RS03095 NONE
IRT44_RS03090  639191 ..  639210 -   -10  -5.14563   TTTCCCATGAAAAAA            GACACCCG GTCA CAGGTGTC             TCAGCGTGTAGACAA 100 405
IRT44_RS03085 NONE
IRT44_RS03080 NONE
IRT44_RS03075  636308 ..  636319 -    -3  -2.90496   GCGTCGGTCAAACCA                TCAA ATAA TTGA                 AACCGTTAGGGATGT  42 44
IRT44_RS03070 NONE
IRT44_RS03065  633881 ..  633918 - -15.6   -4.4009   GCTTATCGCACAAAA   GCACCCGCGCTGCTGC GATCTG GCAGCAATACGGGTGC    TTTCATTGTGCCCTT 100 80
        proV NONE
IRT44_RS03050 NONE
IRT44_RS03045  630044 ..  630068 - -13.6  -5.33785   AACCAGGACAAAAAA         GGACGC-CGCG TGTG CGCGAGCGTCC          CGTTTGCTTTCTTAC 100 37
IRT44_RS03040  628972 ..  628994 - -12.7  -3.28712   GCCGCCGCGTTACAA          CGCCGGCGGC GCTT GCC-CCGGCG           GGTTCTGTTCCAAAC  81 114
IRT44_RS03035 NONE
IRT44_RS03030  625243 ..  625269 -  -5.9   -5.7946   GGGTCAACAAAAAAA         GGAACAGGA ATCATCTGG TCCTGTCCC         CTCATTGTTTCCTTT 100 39
IRT44_RS03025  624293 ..  624322 -  -7.2  -5.79595   CCCCAAAATAAAAAA       TGGGCGGAAAACC GATAA GGTTT-CCGTCCA       TTTTTTGGCTACTTG 100 121
IRT44_RS03005 NONE
IRT44_RS03000  621040 ..  621061 - -10.1  -5.14563   CCCGGCAGCAAAAAA           GACACCGCC AAAA AGCGGTGCC            GGAGGATGGAACATA 100 386
IRT44_RS02990 NONE
IRT44_RS02985 NONE
IRT44_RS02980  616436 ..  616457 -  -3.6   -4.1711   AGGACGGTGAATAAA           GGCGACAA TCGCTC CCGCCGCC            ACTGCGAGCAGGCAG  61 244
IRT44_RS02970 NONE
IRT44_RS02965 NONE
IRT44_RS02960 NONE
IRT44_RS02955  608206 ..  608220 -  -8.5  -5.27779   CGGAACAGGAAAAAA               CCGCC CAAAC GGCGG               TTTTCCCCTTATTTC 100 34
IRT44_RS02950 NONE
IRT44_RS02945 NONE
IRT44_RS02940  605402 ..  605424 - -10.6  -5.42198   GTGCAAAAAACAAAA           GCACCGTC TGCCATC GACGGTGC           TTGTCGTTTTCTCGA 100 145
IRT44_RS02935  604345 ..  604368 - -10.3  -4.92757   GCAGCAACAACAAAA          CAGGCCCCT CCCATC AGGAGCCTG           TCGACAGCCGGGAAA 100 68
IRT44_RS02930  603786 ..  603801 -    -4   -3.6761   GTTGCGGAAGAAAGA              TGGAAA CACG CTTCCA               CAACCTTTCCACAAA  54 70
IRT44_RS02925  603020 ..  603055 - -13.2  -3.79764   ATGACACAAAACGAA    CGACCTGTGCCGCCAG TAAT CTCGAGGCCCAGGTCG     CCATGCACGCGCGCC  90 51
IRT44_RS02920  601297 ..  601307 -  -4.6  -3.78953   AGCTTTAGGAGCAAA                 CCGG CCA CCAG                 CATCCTTCCTCCTTC  56 183
IRT44_RS02915  600910 ..  600945 -   -20  -5.03314   TCCATCGGCAAAAAA    GCCCTTCGG-AAAGACA TCT TGTCTTTTCCGAAGGGC    TTCGCTCGTCACGCC 100 34
        coxB  599442 ..  599455 -  -3.1  -2.64099   TGGGTGCATGAGAAG               CATGT GCAG ACACG                GTTTTACCTCCTTTT  40 67
        ctaD NONE
IRT44_RS02900 NONE
IRT44_RS02895  596622 ..  596643 - -11.6  -4.16943   GTCTACATGCTAAAA           GGGCAGAC TTTTTC GTCTGCCC            TTTCTTCTGTATCAA  91 45
IRT44_RS02890 NONE
IRT44_RS02885  594801 ..  594818 -  -4.2  -2.88579   CGAATCTCTCACACA             TATTCG TTTCGG CGAATA              AATCAGCTTACATTG  47 180
        cyoE  593723 ..  593745 -   -12  -4.46656   TTTACAATAGTAAAA           CATCCCCCGC CAT GCAAGGGATG           TTCCGTTGCCATTTG 100 54
IRT44_RS02875  592704 ..  592735 - -14.5  -4.93365   CCTCACAAGCAAAAA      GCCGCACACTCGGC ATACG GCCGAATG-GCGGC      TTCGCTCGTTTTCAC 100 44
IRT44_RS02865 NONE
        addB NONE
        addA  580151 ..  580182 -  -9.4  -5.47218   TTCTAGGTAAAAAAA      TACATCCGGCTTCC TATT GGAAACCGGATGGT       GATTCTATTGATGTC 100 55
IRT44_RS02850  578368 ..  578400 - -12.1  -4.65747   GAACGCGCAAGAAAA     CGAGCAGGC-TGCC CGCTTC AGCATGCCTGCTCG      TCTCCGTTTGTTCCC 100 44
IRT44_RS02845 NONE
IRT44_RS02840 NONE
IRT44_RS02835 NONE
IRT44_RS02830  573957 ..  574009 - -12.8  -4.36914   CCCCCCGGGACAAAA CAGCCGGACCGCCTGCTGTTC-ACC ATGC GATCGAACAGGAAGCGGTCCGGTTT GTACAGAATGTCATC 100 303
        adhP  568763 ..  568783 -    -9  -2.79183   TTGACGCCCAGCACA            GAAGCGGA TGAAG TCCGCTCC            AAAACGAGACGCGGG  62 343
        purU  567215 ..  567239 - -15.8  -3.66178   TCCCTCAACGGCAAA          GAGCCCTTCC ATTTA GGAAGGGCTC          TCAGCGTGTATACAA 100 398
IRT44_RS02790 NONE
IRT44_RS02785  564078 ..  564098 -  -4.6  -3.54146   CGGCGTAAGTAAACA            GCGCGGAC GGTGA ATCCGAGC            AAGCCCTGTGCGAAA  54 105
IRT44_RS02765 NONE
IRT44_RS02760  557096 ..  557108 -  -4.7  -2.52681   CAAAATGTCACGAAT                GGGCG TCG CGCGC                TGTCACCGGCAGCGG  44 5
IRT44_RS02755  556380 ..  556392 -  -2.7  -4.25389   AGTATAACAGAGAAA                TTCAA ATA CTGAA                AAGCCTAATCTTTTG  59 144
IRT44_RS02750  555823 ..  555855 - -16.3  -4.87318   GCGAAAATGCAAAAA      GGGAAGAAGGGACGG TAA CCGGTCCTTCTTCCC      GATATGTCAAACCAG 100 53
IRT44_RS02745  554632 ..  554650 -  -8.8  -4.74801   CAACCTGATGAAAAA             CAGCATCG AAG CGATGCGG             CAGGGCGGCGTCCTC  93 301
IRT44_RS02730  551565 ..  551575 -  -2.4  -3.21235   CCACAATCAACAAAC                 GGGC CAC GCAC                 TTTTTCCCCCTTGAA  44 135
IRT44_RS02725  551183 ..  551210 - -10.6  -4.67353   CGAGCCACTCAAAAA        CGGCCGACTTCTC TAC GA-AAGGCGGCCG        TATCTCCTTACAGCA 100 33
IRT44_RS02720  549131 ..  549145 -  -2.8  -3.28712   TCCTTGCGCCTACAA               CTGATA TTT TTTCAG               CTTCCGGTAAAACGT  46 5
IRT44_RS02715  548279 ..  548301 -  -8.4  -5.71712   GCGGACATAAAAAAA           CGCCGGTTCA CAA CAAACCGACG           TTGCCGTTTCGCTCC 100 10
IRT44_RS02710 NONE
IRT44_RS02705  545880 ..  545932 - -10.6  -4.66609   GACGTCACCCAAAAA CGAGCCAGGAGCACCCGGCGCGGCTG CCG CA-CCGAACCGAATGCTCCTGGG-CA AACAACCATGTACCG 100 99
IRT44_RS02700 NONE
        lpdA  543136 ..  543147 -  -3.6  -3.55261   GCGGAACAAAAGATA                GCGA GACA CCGC                 AATGCCCGCCCGGTA  52 58
IRT44_RS02690  541821 ..  541832 -  -4.4  -2.93447   TGAATTTTCACAAAC                GAAC TAGC GTTC                 CTGGTCCAACTTATC  47 17
         ald  540501 ..  540529 - -18.2  -5.52384   GGCGCACCAAAAAAA        CTGCCTGCCCCG ATTGG CAGGGCAGGCAG        TTGGTCACGGTTTTG 100 70
        istA NONE
        istB NONE
IRT44_RS02665  536399 ..  536427 -  -6.1  -2.52676   GATCTCCCGAATCGA       GTAGGA-GGGGGT GGTTA ACCCCCGTCCT-C       TCACACCACCGTACG  49 62
IRT44_RS02660  534672 ..  534689 -  -9.9   -5.7946   CGTCCAAGAAAAAAA             CTCATCC GGCC GGATGAG              CTTTGCGCAATGTGA 100 392
IRT44_RS02655 NONE
IRT44_RS02650 NONE
        cbiQ NONE
IRT44_RS02640  531799 ..  531821 - -17.8   -5.2204   CAGAAGCAACAAAAA           GACCGAGGCA TTG TGCCTCGGTC           TCAGTTTGTTTGCAG 100 146
        panE  528674 ..  528691 -  -6.9  -2.78463   ACGGTCTGCACCAGA             TGCACCC TGTC GGGAGCA              ATGCCGACAGCTCCC  53 488
IRT44_RS02620  526738 ..  526767 - -10.1  -5.14965   ACGGCCAGCAAAAAA       GGGCGCTATCCG TTTGTCT CGGATA-CGCCC       GGTTATCCGGAAACA 100 60
IRT44_RS02600  523821 ..  523847 - -10.9  -3.40073   ATCGCCAGGAAGCAA         GAAAGGGGAGC ACGTG GCTTCCCTTTC         AATCGTTTTTGGTTA  75 126
IRT44_RS02590  521481 ..  521536 - -16.3   -2.7806   TGCAAACCGGGAAAT TTGTCTTCAGTCTGAAGGGACATCC GACAAG GGATGTCCCTTCTGTTTGCAGACAA GTCCGTAGCCCATGG  91 73
IRT44_RS02555  515374 ..  515395 - -10.1  -4.36914   CTGCGCCTGAGAAAA           GAGCCGGCA AGAA TGCCGGCTT            GCGTGTTACTGCGGG  87 31
IRT44_RS02550 NONE
IRT44_RS02545  512771 ..  512791 -  -9.7  -5.27477   AGGCCAAGCAAAAAA            CCGAAGGAA TGA CTCCTCCGG            TTCAGCGTGCAGACA 100 114
IRT44_RS02540  511340 ..  511353 -  -2.3  -3.78022   CGTACAGGCAGCAAA               GACGC AGCC GCACC                TGCCGTTTATGCCAT  50 40
IRT44_RS02535 NONE
IRT44_RS02530 NONE
IRT44_RS02525  505505 ..  505540 - -13.4   -5.0925   TCCGAAAACGAAAAA    CAAC-GAAGCCGAGGGA CAT CCCCTCGGCTTCTGTTC    ATTTCACCCGTTACA 100 36
IRT44_RS02495 NONE
IRT44_RS02490  499060 ..  499082 - -11.4   -5.4251   CGCACATACAAAAAA           CCTCTTTTCC CGA AGAAAAGAGG           TCTGTTCATACGCGT 100 289
        mtnK NONE
        mtnA  496570 ..  496583 -  -9.5  -3.51904   CAGGAAACGCAAACA               GCGCC CGGG GGCGC                TTTATCGGTGGGAAA  74 92
IRT44_RS02475  495877 ..  495898 -  -7.3  -4.67607   TTCGCAACAAAGAAA           GGGA-TGCGC TGC ACGCAATCCC           TTTTTCGCTAGTCAT  82 90
IRT44_RS02470  494405 ..  494423 - -11.7  -4.72986   GACGTTCAGCAAAAA             CAGCCCG TTAGT CGGGCTG             CATGACAGACGATAT 100 65
IRT44_RS02465  494045 ..  494078 -  -9.7  -3.84451   CCCCCCAAACGTAAA     CATCCCGCA-CCAC GTGGATT GTGGATACGGGATG     CCGGGGCACGCCATG  78 90
IRT44_RS02460 NONE
IRT44_RS02455  492470 ..  492501 - -13.8   -5.2197   GATAAAAATGAAAAA      CCCAGGAATGTTGA TTTT CCAGCATTCCTGGG       TTTTGTCTTTGTTAG 100 70
IRT44_RS02445 NONE
IRT44_RS02440  490360 ..  490388 - -11.8  -5.02074   GCAGTCCTTAAAAAA       CGGCAGCCACGCA TCGC TGC-TGGCTGCCA        TACCCTGTCATCCGT 100 44
IRT44_RS02435  489785 ..  489812 -  -6.2  -3.54129   GACAGGTGCTCCAAA        CGCCG-CGACGGG GTC CGCATCGTCAGCG        CGCCCCCCAGGCTTT  59 20
IRT44_RS02430  488593 ..  488612 -  -2.8  -2.85008   TGGCACAACAAATAG            CATTCCCA CTCG CAGGAACG             TTTATGCGCCGGTCG  41 27
IRT44_RS02425  487867 ..  487892 -   -12  -5.40072   GCTCCTGCAAAAAAA         GGGTCTAACA GCAGGT TGTTAGACCC          TTTTTCATCTGATGC 100 49
IRT44_RS02420 NONE
        gcvH  486835 ..  486858 - -13.2  -4.82901   GCCCCGTGAGAAAAA          GGCCGG-AGCA TGC TGCTTCCGGCC          TTTTCGTGCACATTC 100 41
IRT44_RS02410 NONE
IRT44_RS02405  485571 ..  485598 -    -7   -4.4261   CTCGGAACAGCAAAA        CGGCACCCAGC GCTGCCT GC-AGGTGCCG        TTCTCCATATCTCTC  74 65
IRT44_RS02400  484988 ..  485001 -  -3.1   -3.7821   ACCATTATAACACAA               GA-CCC ACC GGGCTC               CGCAGCGTACCGTCA  52 96
IRT44_RS02395  483677 ..  483698 - -13.7   -4.5442   CGCCGAACGACAAAA           GCCTCCGCC GGAT GACGGAGGC            ACCGTTGCCTGTGAT 100 40
        pckA  481783 ..  481814 - -12.3  -5.00616   CTGCTCGCGAAAAAA     GGCGCCCGGCGGCCA TGTT CGGCCG--GGGCGCC      TTTGCGTATGCTGGT 100 40
        sufC NONE
        sufD NONE
IRT44_RS02375 NONE
IRT44_RS02370 NONE
        sufB  476157 ..  476192 -  -8.4   -5.1101   CCATCACCGAAAAAA    TGAAGAAGACGAACTT AAAA AAGTTCGCCTTCTATA     CCAAAAGAAAGAATT  93 126
IRT44_RS02360  474479 ..  474513 - -13.7  -5.50723   CCATGAAAATAAAAA    CACCCCTCCCTACATC GATT GAT-TAGGGAGGGGAG     CTACGCCTACATTGT 100 94
IRT44_RS02355 NONE
IRT44_RS02350  473748 ..  473788 - -11.3  -4.39877   CTAACAAGGAAGAAA GGGCGTCCAG-AAGTCAG TTTTCC CTGACTTTCTGGACACGC  CCCTTTAACAAAAAG  91 44
IRT44_RS02345 NONE
IRT44_RS02340  469879 ..  469905 -  -4.5  -5.95539   GTGGAAATAAAAAAA         GAATCCGCATA AAAAA TATACGGATTT         CATCATGGATGTAAT 100 50
IRT44_RS02335  468424 ..  468467 - -18.4  -2.62184   GCTGGCTTTACACCA GCTTTGGAGAATAAACCTCG TCGC CATGGTTTATTCCCCAAAGC TAGTGTAAAACACTA 100 471
IRT44_RS02330  467647 ..  467676 -  -6.4  -3.01712   TGGGGGCTCCCAACA       GCACACCGGATA ACCTCG CATCCGGCCTGC        ATCATACCGCAACAG  52 108
IRT44_RS02325 NONE
IRT44_RS02320  465819 ..  465840 - -12.3  -5.71712   CTCCAGACAAAAAAA           CCCTTCCCG GTTT CGGAAAGGG            CTCGTATCCATTACT 100 204
IRT44_RS02315 NONE
IRT44_RS02305 NONE
IRT44_RS02300 NONE
IRT44_RS02295  459327 ..  459356 - -14.3  -5.14682   TCAGAACAAACAAAA       GCAGGCTTCCCAC CTGC GAGGGAAACCTGC        TTCAGACCGAAGACA 100 466
IRT44_RS02290 NONE
IRT44_RS02285 NONE
IRT44_RS02280  454700 ..  454726 - -14.5  -3.74077   CGGCACACAGCCAAA        CGCCTCCTG-GC CGAA GCACAGGAGGCG         CTGCCGTATGAGTAT  95 447
IRT44_RS02270 NONE
IRT44_RS02265 NONE
IRT44_RS02260 NONE
IRT44_RS02255 NONE
IRT44_RS02250  450466 ..  450493 -  -9.9  -5.58209   GCAAATGCAAAAAAA        TCGCCTCCGTC TCTGCC GACAAAGGCGA         CTTTTTTCCGCATTT 100 65
IRT44_RS02245  448888 ..  448923 -    -9  -4.52589   GCGCTGCATACAAAA    GAACTTCCGCTGATCGA ACC CCG-TCTGCGGAAGTAC    TTCGGCGATATATTG  86 351
IRT44_RS02230  446368 ..  446410 -    -7  -4.56597   GCTGCTGCGTAAAAA CACGTAGGCACACCATGG AACAGCA CCATAGTGTGCCTGTTTG TCGTTACAGGCTATC  76 42
IRT44_RS02215 NONE
IRT44_RS02210 NONE
IRT44_RS02205 NONE
IRT44_RS02200 NONE
IRT44_RS02195 NONE
IRT44_RS02190  439422 ..  439447 - -15.5  -3.95435   GGGGGCAAAAGAGAA         GCCGAACCTGCC TTA GGC-GGTTCGGC         TCGGCTGCTCGATGC 100 117
        yunB  438349 ..  438371 - -12.1   -5.4505   CGCCCCAACAAAAAA           TGCCCTGAT GTCGG ATCAGGGCA           TAGGGGAATAAGCCT 100 310
        ribD  437178 ..  437190 -  -3.3  -2.60813   CAGTCCGGTAAACAT                GGCGT CGC ACTCC                TCCTCGTTTCTCACG  40 36
IRT44_RS02175 NONE
IRT44_RS02170 NONE
        ribE  434725 ..  434752 -   -12  -3.41708   GGAACGAAAATGGAA        CCGCCAGGCC CTTTTGGC AGCCTGGCGG         GAGTGGAAGCGTCTG  80 71
IRT44_RS02150 NONE
IRT44_RS02145  429956 ..  429987 -   -21  -3.59262   GTCTACACGCTGAAA      CAGCCTTGCCCGCT TGTC AGCGGACAAGGCTG       TCGTTTTTTCACTAG 100 37
IRT44_RS02135 NONE
IRT44_RS02130  425189 ..  425199 -  -2.4  -3.07816   TCGCGACCTAGCGAA                 GCCC GCC GGGA                 AAATCCACATACCCA  42 81
        lipA  424150 ..  424170 - -11.9  -4.20918   GCTAACGGCAACAAA            CCCCTATGA CTG CCATAGGGG            TTTGCTTTTTTGTCT  95 39
IRT44_RS02115  422368 ..  422397 -  -6.4  -3.70902   TGCCGCAGAGCCAAA       GGCATCGATCCGC GCTCA ACGGA-CGGTGCC       TTGTTCCGTTTTTAC  62 171
IRT44_RS02100 NONE
IRT44_RS02095  419930 ..  419946 -  -2.3  -3.72576   GGCCTCTTTAGTAAA              CAAAAGA AAG TGTTTTG              TATAAAAAATCCGCG  50 50
IRT44_RS02090  419198 ..  419217 -   -10  -4.77165   CCGTTCACAACAAAA            TCCACCCG GCGA CGAGTGGA             TTTACGCACGTTGTC 100 47
IRT44_RS02085  418277 ..  418293 -  -5.1  -3.74224   GCTAAAGGATCTAAA              CGACAAA CGC TTTGGCG              TCCACACTTTTCTGG  56 118
IRT44_RS02075 NONE
IRT44_RS02070 NONE
IRT44_RS02065 NONE
IRT44_RS02060  414760 ..  414789 - -12.9  -4.30978   TCTAATCGAGCAAAA       GCCCTTACCGG TTTTACGG CCGGCAAGGGC        TTTTTACTTTTTCAG 100 29
        cysK NONE
IRT44_RS02045 NONE
IRT44_RS02040  411888 ..  411909 - -13.7  -4.65153   GCATACAAACGAAAA           CGAGCGGGA TTGC TCCCGCCCG            TTCTTACTTTGCCTC 100 29
IRT44_RS02035  411235 ..  411291 -    -6  -2.96157   GCCATAAAAAATTCA CCCCTTAAAGTA-ACATCGG-TTTTCCC AAG GGGTTTTTCCAATGTCTACTTTAAGGGG TGCACTCTATCTCGC  52 66
IRT44_RS02030 NONE
IRT44_RS02025  410055 ..  410076 -  -3.5  -5.14477   TAGACACTTAAAAAA           CCCCCGGCC GTTA GGCCGCATG            CTGACGCCTGTACTC  78 14
IRT44_RS02015  408388 ..  408414 - -10.9   -5.5074   GAATTCAACAAAAAA        GGGCAC-GCCGA TCAT TCAGCCGTGCCC         TCTTCATCTCCCTGT 100 43
IRT44_RS02005  406597 ..  406609 -  -6.9  -5.96894   AGCGAAACAAAAAAA                GAGGG ATG CCCCC                CTTTATGCAAAATGC 100 28
        erpA  405985 ..  406039 - -14.5  -4.56597   CTTCCCCGGCAAAAA GA-GAAACCCTCGC-GGCATCGCATGA CCG TCATGCAATGCCCACGAGGGTAGCGTC CTCTCGTCTGGCGTC 100 41
IRT44_RS01995  405362 ..  405404 - -14.9  -4.94058   TTAAGTCAAACAAAA GCGTGGCGGTCAAGAACGTG TACA CACGTTC-CGTTCGCCACGC TTTTTCGTGCTGCTG 100 70
IRT44_RS01985  403686 ..  403696 -  -2.4   -3.6003   GAAATCATGGCTAAA                 GCGG CCG CAGC                 CCGTCCCTGTCCAAC  47 10
IRT44_RS01980  402845 ..  402866 -  -5.8  -5.14563   CGTTCCACGAAAAAA           GGACGCGC ACCGGG ACACGTCC            TTTTTTTGGTTCCAA  86 62
IRT44_RS01965 NONE
IRT44_RS01960  399358 ..  399383 -  -9.7   -5.9362   GAAAACAGAAAAAAA         CCGGGATGTAA GCGG CTGCATCCCGG          TTTTTCTTGCTCATT 100 137
IRT44_RS01955  398841 ..  398853 -  -3.3  -4.19506   AGGTCAATTGGAAAA                GCGGC GGA ACCAC                TATGGTCGGCTCTAA  59 257
IRT44_RS01950  398441 ..  398463 - -14.8  -5.17353   AGACGCATCAAAAAA           GGCAGGCCCG CAA CAGGCCCGCC           AAACCAACGGTTAAA 100 36
IRT44_RS01945  397631 ..  397663 - -14.3  -4.04174   CTGTACACAAGCAAA     GGATTTGCCGCCGG CTCACT CCGG-GGCAAATCC      TTTTTGTGTTTCCAA 100 51
IRT44_RS01930 NONE
IRT44_RS01925 NONE
IRT44_RS01920  393660 ..  393684 -  -7.7  -5.08601   TCACTGCAAGAAAAA          CACCCCCGCCA ATG TGCAGGGGGCG          TCCTTCGCAATGCGG  91 87
IRT44_RS01915  392777 ..  392804 - -14.2   -3.9941   CTCCCCATAACGAAA        TAGCGGGAAAGG TTGC CCTTTCCCGCTG         ACTACTCTTGACCTA 100 132
IRT44_RS01910  391865 ..  391897 - -11.4  -4.82901   GTTGTTTGATAAAAA      GCTCCGACCATCTA GTCTT TAGATGATCGGAGA      AGTAGTACGTGAACG 100 302
IRT44_RS01905  390534 ..  390546 -  -3.3  -2.82895   CTCCTTACCAAGAAG                GGAGC ACC GATCC                GGAAAACTCTTCTTC  41 2
IRT44_RS01900 NONE
IRT44_RS01895  388731 ..  388757 - -10.1  -4.54727   TTCGCCAAATGAAAA         GACCCGCGCCA GTCAT TGACGCGGGTG         GAGATGTGTGCCGCC  90 55
IRT44_RS01890 NONE
IRT44_RS01885  386606 ..  386631 - -15.5  -5.18357   GAACGCATGAAAAAA         GGAACCCGCTG TTTT CAGCGAGTTCC          CTGTCGCAAGTGTCC 100 66
IRT44_RS01880 NONE
IRT44_RS01875 NONE
IRT44_RS01870 NONE
IRT44_RS01865  382789 ..  382812 -   -11  -5.18726   CCGGCACAACAAAAA          TCCGAGGCGC TCGT ACACCTCGGA           TTTCTTCTATTCCCC 100 51
IRT44_RS01860 NONE
IRT44_RS01855 NONE
IRT44_RS01850  379325 ..  379364 - -12.9  -5.15167   GAGTATCAACAAAAA  GGCTCCCACATGCTTGC ATCAGA GCAAACAGGCAGGAGCC   TTCAGTTGACTGATC 100 260
IRT44_RS01845 NONE
        ssuD NONE
        ssuC NONE
IRT44_RS01830  375326 ..  375362 -  -9.3  -5.63504   AATCCCATAAAAAAA    GCAGATCACCTTGAAGC CTG GCAGCTTGGTGATCTGC    TCATTTTTGCAGTTG 100 157
IRT44_RS01825  374405 ..  374433 - -14.6  -4.60797   GCCGGACAGACAAAA        GGCACAGCTTCC TGTTT GGATGCTGTGCC        TCAGCGTGTAGACAA 100 145
IRT44_RS01815  372652 ..  372676 - -14.4  -5.60993   CCGGGCAGAAAAAAA          GCCGATGTTC CAAAT GAACATCGGC          TGCTTTCCTCACTAC 100 37
IRT44_RS01800  368579 ..  368596 -  -4.8  -3.08639   AATATTTCGAATACA             CATGCG CCGGGT CGCACG              GCTGCCTCGCTTCCT  48 80
IRT44_RS01795  367439 ..  367480 - -15.2  -3.00786   GCCAAAAGCGATACA GGACCGCGCCCG-CCGGGGA CTGC TCCCGGGACGGAC-CGGTCC TGCTTTTTGTGCCGA  86 65
IRT44_RS01790  364253 ..  364277 - -14.4  -5.44119   CCCACCTCAAAAAAA          TGCCAGACGA GCCGA TCGTCTGGCA          TTTTGCCTGTAAAAA 100 112
IRT44_RS01765 NONE
IRT44_RS01760 NONE
IRT44_RS01755 NONE
        galT NONE
        galE NONE
IRT44_RS01740 NONE
IRT44_RS01735 NONE
IRT44_RS01730  352626 ..  352665 - -20.9  -4.13654   TCTGCAAACGAGAAA  CGAGCCCTGGGCTTTGC CTGCCT GCAAAACCCAGGGCTCA   CATTTGTTTCGGGGT 100 64
IRT44_RS01725  350863 ..  350888 -    -9  -5.26875   GTGTCAACCAAAAAA         CCAGCGGG CAGCCAATAT CCCGCTGG          TTTTTCCGTTGCTTA 100 38
IRT44_RS01710  346551 ..  346585 - -10.7  -5.97979   ACAACAACAAAAAAA     GCCTCCACCCGGAAC CTTTT GATCCGAGTGAAAGC     TTTTCGACGTGTGTG 100 56
IRT44_RS01705 NONE
        nagB  344654 ..  344682 -  -6.7  -3.56366   AACAAGCGCCGCAAA        CAACGGCCG TTCACACCAGG CGGCCGCTG        TTTTTCGTCTCGGCT  62 7
IRT44_RS01695  343753 ..  343778 - -10.5  -5.81412   TGCATGCAAAAAAAA         TCTACCC-CGGC TGC ACCGTGGGTAGA         TTATGGTTGAAAGGG 100 41
IRT44_RS01690  341289 ..  341300 -  -4.4  -5.28942   CATTCCAAATAAAAA                GAAC AGCC GTTC                 ATCATTGTACAAATA  84 121
IRT44_RS01685  339155 ..  339195 - -13.2  -3.86816   GCCAGAAAAACAACA GCCCGGGAG-GGGGTGATC CCTT GATCTTCCCGCGCCCGGGC  AATCTGAATACGCAC  90 67
IRT44_RS01675 NONE
IRT44_RS01670  335802 ..  335856 -  -5.8  -3.05384   CTGTGCCGGACGGAA CCGGACA-C-GG-CCAGACGGAAAGGG GTCC CCCTTCCCGTCTGTTCCTGCTGTCCTC ACCCGCTTACTTCTT  53 32
IRT44_RS01665 NONE
IRT44_RS01660  332798 ..  332811 -  -6.7  -2.51133   GATGTATGCATCAAT               CATGG CCGT CCATG                GAGCCGGTTCCTGCT  52 130
IRT44_RS01655  330171 ..  330206 - -16.8  -4.09685   GGGGAGCCGGGAAAA    GCGGGGAAGACGGCCG ACTG CGGCCGTCTCTCCCGT     CCCGTTTTCCTGTCT 100 40
        argH NONE
IRT44_RS01645 NONE
IRT44_RS01640  326847 ..  326858 -  -2.2  -2.64938   CGAAAATGCTACAAC                TCCA TCAC CGGA                 ATCCCGTTCTTGGGC  39 7
IRT44_RS01635  326496 ..  326527 -  -5.2  -5.40072   GGCTTGCCAAAAAAA      GACGCAGT-CCCT TTTCATC AGGGTACCACGTC      TTTTGACAGGATGAA  91 77
IRT44_RS01630 NONE
IRT44_RS01625 NONE
IRT44_RS01620  323762 ..  323776 -  -3.4  -2.87881   TAATGCGCCGATAGA               GGCGAG GTT CCCGAC               GGGGTTCCGTCAGCA  42 63
IRT44_RS01615 NONE
        nagA NONE
IRT44_RS01605  321478 ..  321506 - -14.7  -5.14563   CTTGGCATGAAAAAA        GAGCGAAGCAG ACTCGTG CTGCTTCGCTC        AGCGTGTAGACCATA 100 24
IRT44_RS01590 NONE
IRT44_RS01585 NONE
IRT44_RS01580  315510 ..  315534 - -11.4  -4.27316   TTCCCCAACGCAAAA          GCGGGCGTCC GTTGA AGACACCCGC          TTTTGTTTACTGACC  91 55
IRT44_RS01575 NONE
        rbsK NONE
        rbsD NONE
        gguA NONE
        rbsC NONE
        rbsB  309482 ..  309504 -  -9.1  -5.76949   CATGCGCAAAAAAAA           CCTCCCGCC GTACA GACAGGAGG           CCCATTTCCGGTGTT 100 39
IRT44_RS01540 NONE
IRT44_RS01535 NONE
IRT44_RS01530 NONE
IRT44_RS01525  304886 ..  304930 -  -9.3  -5.40072   GTGCGCTGAAAAAAA CA-ACGGCCCGACACACGGGA GATGT CCCCGC-TGCCGGGCCGGATG CACGCGTCCCGCCGC 100 72
IRT44_RS01520 NONE
IRT44_RS01515  302952 ..  302965 -  -2.3  -4.25104   GCTGTTCGAGCAAAA               TCCGG CTGC CCGCA                CGCTCTATCAGTGGG  59 248
IRT44_RS01505  301597 ..  301607 -  -4.6  -3.89291   TCAACAGGACAACAA                 CCCG TCA CAGG                 GAATCCTCTGGCAAA  59 247
        rsgA  300422 ..  300453 - -10.9  -6.40073   AAGTCAAAAAAAAAA      GCGCGAACCCTCGC GCAAT GGGAGGGTTCG-GC      AGGATGGAACAGCAG 100 46
IRT44_RS01495 NONE
IRT44_RS01490  297995 ..  298016 - -14.5   -3.9941   TTGTCTACAAGCAAA           GGGGACTGT CTGC ACAGTCCCC            TCTTTGACTACAGTC 100 101
IRT44_RS01485 NONE
IRT44_RS01480 NONE
IRT44_RS01475 NONE
IRT44_RS19305  293808 ..  293822 -  -2.8   -4.4773   TCACAGGAAGGAAAA               TGAAGC ATG GCTTGA               AACAAGCGAGATTTT  64 42
IRT44_RS01470  293181 ..  293212 - -13.1  -4.43911   AAACGCCAAGGAAAA      CGGCTCTGCT-GCA ATCAA CGCGAGCAGAGCCG      TTTTCGTTACTGTTG 100 32
IRT44_RS01465 NONE
IRT44_RS01460 NONE
IRT44_RS01455  288864 ..  288879 -  -2.5  -4.56775   AGCGTGCCCGAAAAA              GACAG GCGGAA CTGCC               GGCGGGAAGTCAGCG  62 210
IRT44_RS01450 NONE
IRT44_RS01445  288371 ..  288398 - -14.2  -3.46509   GCGTAATAACAGCAA        GACCGCC-GGAGA TCT CCTCCTGGCGGTC        TGTTTTGCATCTGAA  88 145
IRT44_RS01425  285321 ..  285341 - -14.7  -5.71712   GCGCAGACAAAAAAA            CCCGCCTGC CAA GCAAGCGGG            TCTCGGACGATCAGC 100 36
IRT44_RS01420  282708 ..  282736 - -15.3  -5.14563   GGCTGGACTAAAAAA        GGCAGCGGGCT GCTGCCT AGCCCGCCGCC        TGCCCGGTGCGGACC 100 49
IRT44_RS01390 NONE
IRT44_RS01385  273524 ..  273543 - -12.8  -5.58454   TGCACACCAAAAAAA            GCGGCCCG GTGA CAGGCCGC             TTTTGGCGTCATGTT 100 69
IRT44_RS01380  272957 ..  272967 -  -4.6  -4.18018   CCTGCTGACGCAAAA                 GCCG TCG CAGC                 AGCTCCAGGAGCAAT  64 229
IRT44_RS01370  270974 ..  271006 - -16.4  -4.61633   AGACATGCGCAAAAA     GACGCCAGCTGCTCC CGCG GGAGCAAC-GGCGTC      TTGTACGTCTGCTGG 100 107
IRT44_RS01355 NONE
IRT44_RS01350 NONE
IRT44_RS01345  265464 ..  265516 - -11.3  -4.65895   GTGCGCATGCAAAAA GACAGCCGGACAACCGTATCCGCG CGGTGC CGCGCAT-CGGGTGTCCGGCTTTG TAGTATGGGGGACGG 100 50
IRT44_RS01340 NONE
IRT44_RS01335  262890 ..  262913 -   -11  -4.52505   AAGAAAAATGCAAAA          GACCTTCCGC CATG GCAGAAGGCC           TTATCCGGTATGGGA  95 26
IRT44_RS01330  261904 ..  261914 -  -2.4  -2.87647   ATTCAGTATACCACA                 GCCC ATA GGGA                 AAGAAAACGCGTGAT  41 55
        cimA  260149 ..  260185 - -10.2  -5.52986   ACTGCACGAAAAAAA   CGAGCCCTCCCGTC-GGC ACT GCCTGA-GGGAAGACCCG   TTTTTTTGTTTTTAT 100 40
IRT44_RS01295  253321 ..  253362 - -11.5  -6.34424   TTGGCAAAAAAAAAA CGCGCCCGCACGAC-GGCTG ATA CAGCCTGCCGCACACACGCG TCCTGCCGGCGGGGA 100 51
IRT44_RS01290  250999 ..  251021 -  -7.7  -4.96501   TCCCATAAAAAGAAA           GAAGACCCG CTTCC CGGGTCTTT           TTTACAGGGATCGCA  87 106
IRT44_RS01285 NONE
        pepV  248715 ..  248749 - -14.2  -5.25154   AAAAAAACAACAAAA     GGCGGCCGGCTGCAGA AAT TCCGCAACGCGCCGCC     TGCACAATCATTTCG 100 33
IRT44_RS01275  247203 ..  247225 - -10.6  -5.08824   CGGCCATGCAAAAAA           GCAGCCCATA CCA CATGGACTGC           CTTTCGCGTGGCGGT 100 54
IRT44_RS01265  244713 ..  244735 - -13.5  -5.05782   ACCCATGCGAAAAAA           CGCTCTTCC TGTAT GGAAGAGCG           CGTGCTCGTTTGCTC 100 77
IRT44_RS01260  242991 ..  243015 - -15.8   -5.4505   CTGGCTAAGAAAAAA          CAGAGGTGCC CTCGT GGCACCTCTG          TGTTGCTCACCTACT 100 36
        hppD  240892 ..  240912 - -16.9  -3.32997   TTTCTACAAACTGAA            GCCCCCGAA AGA TTCGGGGGC            ATGGTATCAGGTTCA 100 47
IRT44_RS01245 NONE
IRT44_RS01240  237908 ..  237918 -  -6.8   -2.9652   TAAAACCTAACCATA                 CCGT ATC ACGG                 AAGAGGGAGGACGCA  54 115
IRT44_RS01235 NONE
IRT44_RS01230  235496 ..  235528 -  -9.7  -2.75343   CGGACAGCCGGAAAG      CGGCGGGAGGCCCGT CAG ACGGACCTCCCGATT      TCTCTTGTATGCCAG  65 54
IRT44_RS01225  234524 ..  234541 - -11.3  -5.74122   CACCATACAAAAAAA             CCACTGG GGTT CCAGTGG              TTTTTGTCATGTCGC 100 32
IRT44_RS01210  229708 ..  229718 -  -2.4  -4.72029   GCGAAGGGAAGAAAA                 GCCC ATT GGCC                 ATTCTCCCTCGCGCC  65 66
IRT44_RS01205 NONE
IRT44_RS01200 NONE
IRT44_RS01195  226748 ..  226782 - -19.4  -4.57569   TTAGCCCCTGAAAAA     GTAAACGCGGGCCCCT TTA AGGTACCCGCGTTTAC     TGTTTTTCCTACCTC 100 34
IRT44_RS01165 NONE
IRT44_RS01160 NONE
IRT44_RS01155  218847 ..  218866 -  -8.5  -5.52096   AAAGGCAACAAAAAA            CCGGACC CTCATC GGCCCGG             CTGGATCTTCTGCTG 100 14
       abc-f  216386 ..  216419 - -13.8  -4.09511   AATACCCTGTGAAAA     CGGGGAAGGCCTGG TCAAGT CCGTGCCTTCCCCG      CAGCTGTTTTTTAAT  93 78
IRT44_RS01140 NONE
IRT44_RS01135  214404 ..  214419 -  -7.6  -5.56673   AGTCATAAGAAAAAA              CAGTCT TTCT AGACTG               TTTTCCTCTTGCGCA 100 18
IRT44_RS01130 NONE
IRT44_RS01125 NONE
IRT44_RS01120 NONE
IRT44_RS01115  210543 ..  210597 -  -3.7  -3.57572   GAAGCAAAAGAGGAA TGC-G-GCATCGACATCGACC-CGGCC GATCT GGACGTGGTCGGCGT-GATGCACCGCA AATCGACGGACGAGC  51 262
         tkt  207878 ..  207901 - -11.8  -4.62069   TTGTCACTGGAAAAA          GCCTG-TCTCC CAA GGAGAACAGGC          TTTTTCACGCAATAA 100 63
IRT44_RS01095  205225 ..  205240 -    -4  -3.70051   AAATAGTCGAAAATA              TGCTAA CTGT TCAGCA               GATTTCCACTGTCAG  54 37
IRT44_RS01090  204774 ..  204798 - -19.3  -5.00884   ACCGTCGGCAAAAAA          GCGCGCTCCCG CTG CGGGAACGCGC          TTTGCTTATTCTTCC 100 31
IRT44_RS01080  202447 ..  202459 -  -3.3  -4.07568   CGGCCCCCGCGAAAA                CAGAC ACT GTCGG                GGCAATCGCGTCAGA  56 36
IRT44_RS01065  199377 ..  199410 - -16.7  -3.64703   CCGGGCGCACCGAAA     CAAGCGCGGGTCAGC GTTG GCTTTCCCGCGCTTG      TTGTTTTTGATTGGT 100 43
        ltrA  197485 ..  197519 -    -8  -2.95009   AATCAGAAACAGAAT    CGAGTAGGA-GGGGGT GGTTA ACCCCCGTCCT-CTCA    CACCACCGTACGTAC  60 59
IRT44_RS01050 NONE
        menC  194528 ..  194556 - -16.8  -4.17048   TTCGGTCCAAAACAA        CACGGGCACCTC ACAAA GAGGTGCCCGTA        CGTTTGATCAAGATC 100 33
IRT44_RS01035  192091 ..  192123 -  -2.6  -4.28774   TCACGTAACGTAAAA     CACCTCTATGC-CGC CCCG GCGTGCCCAGGGATG      CTTCGTTTTTCGCGG  60 62
IRT44_RS01025  190541 ..  190557 -  -2.9  -3.30957   TCAACAAAAAAAGAC              CGGGC ATGCATG GCCCA              ACGCGAACGGCACCG  46 193
IRT44_RS01020 NONE
IRT44_RS01015 NONE
IRT44_RS01010  187771 ..  187793 - -13.4  -4.07687   ACTGCTCCCTCAAAA           CGCGGCGG GCCGCAA CCGCCGCG           CCTTTGCCTGTCAAA  93 36
        cobA NONE
IRT44_RS01000 NONE
         sat NONE
        cysC  183504 ..  183514 -  -4.6  -5.57729   AAACAAGACAAAAAA                 GCGC TCG ACGC                 ATTCCGTGAAAAAGG  91 199
IRT44_RS00980  178959 ..  178981 -    -7  -5.09426   CGCAAGCGTAAAAAA           GGCCTTGC TCAATCG GCAAGACC           TCAGACTGAAGACAA  91 399
IRT44_RS00975  178325 ..  178353 -  -6.2  -3.28712   CCGCCTTTCGTACAA       GTTTGT-CTACCA CGTA TGATAGCACAAAC        TCGGCTGCAAATTAA  55 113
        lepB  177630 ..  177677 -  -7.2  -4.56597   CGTGCGGCTGAAAAA CACGAAA-CGGAAGCAAGTCCCC TATCT GGGG-CC-GCTTCCGTTTTCGTC GTTCGCTTCTCCATG  79 93
IRT44_RS00965  176668 ..  176690 -  -9.2  -5.14563   CCGTGCAGCAAAAAA           GACCACCT GACGTCA AGGTGGTC           TTTTCAATACCTATT 100 36
IRT44_RS00955 NONE
IRT44_RS00950  173461 ..  173473 -  -4.1  -2.70932   CGTTTGCGTCAATGA                CACGT GGG ACATG                GGACGCGAAATCCCC  43 109
IRT44_RS00945 NONE
IRT44_RS00940  171355 ..  171379 - -17.9   -4.4261   CCCCCAACAGCAAAA          GGCAGCCGCCT TGA AAGCGGCTGCC          TCAGACTGAAGACAA 100 418
IRT44_RS00935  170362 ..  170383 - -10.1   -5.4505   TTCGGCAACAAAAAA           GCTGCCGGA CGTA CCCGACAGC            GCGCAGCTTCGTTTT 100 65
        istA NONE
        istB  166633 ..  166648 -  -4.7  -3.57462   TAGTGCATTTGCAAA              CTTCC TAGGGG GGAAG               TGGGAGATCTCAAAC  53 243
        moaC NONE
IRT44_RS00885  158903 ..  158924 -  -9.4   -4.2704   TCTACCATGAATAAA           CGCCCCTC GCACGA GAGGGACG            CTGCCGTAAAAGCGT  79 127
IRT44_RS00880 NONE
IRT44_RS00875 NONE
IRT44_RS00870  153553 ..  153580 -   -15   -4.8622   GCGGCTAAGCAAAAA        GCCCCTTTTCCT GTAC AGAAAAAGGGGC         AGATCGACATCTCCA 100 315
IRT44_RS00865  152252 ..  152282 - -13.3  -4.42765   TCCCAAAAAATCAAA       CCGCCAGGGCGTT TTGCG AACACACTGGCGG       TCAGTTCTCAATCAC 100 56
IRT44_RS00860  151427 ..  151445 - -10.3  -5.32944   TGGACAAGCAAAAAA             GGAAGCG TAAAC CGCTTCC             CGTCTCATTCTCTGG 100 87
IRT44_RS00855  150027 ..  150054 - -14.3  -4.21812   GCGCACCGAAAACAA        GAAGAGTCCTC ATCACA GAGGACTCTTC         TTTCGTATGAGAATC 100 75
        ltrA  147987 ..  148014 -    -4  -3.04322   GGCAATCGCCGAAGA        CTTCGACACCGCG TTC CTCGGCGACGA-G        CAAATGAACAGCTTC  45 209
IRT44_RS00835 NONE
IRT44_RS00830  145846 ..  145865 - -10.7   -5.4505   GCCCCCAACAAAAAA            CCCCGTC TACCGT GACGGGG             CTTGTTTTTCAAAGG 100 12
IRT44_RS00805  142149 ..  142173 - -12.2  -5.24129   TCGCCGCACAAAAAA          GCGAAGGGAC GCAAA ATCCCTTCGC          TTTTTTATCTGCTCT 100 78
IRT44_RS00790  140246 ..  140273 - -13.4  -5.71983   CCAAGCAGAAAAAAA        CGCCCGGCGG CTGACCTC CCGCCGGACG         AAAGAACAAGACCGG 100 102
IRT44_RS00785  139696 ..  139721 -  -5.4   -5.1287   GGCACAGCGAAAAAA         GAGCCGTCCT TTCGTG AGGACAACCC          GGTTCGCCTAGACCA  83 50
        ytxJ  139083 ..  139109 -  -8.7  -5.60993   GCTCTCACAAAAAAA        CGGGTGCGGCCC TTAC AAGCC-CACCCG         TTTTTTTGTGCAGTT 100 133
IRT44_RS00770  135475 ..  135501 - -13.7  -3.33151   TTCGTCAAATGAAGA         GGGCCCTCCCG CCGAT CGGAAGAGCCC         TGGACACTTATTTTA  83 56
IRT44_RS00765  135050 ..  135062 -  -3.3  -2.66964   GCACTTATGATACGA                CAAGC CGT GCCCG                GTTGCAATCGTTTAT  40 56
        ccpA NONE
IRT44_RS00755  132944 ..  132967 - -13.2  -4.82667   GCACCATATGAAAAA          CCGGTCTCTC CCGC GAGAAACCGG           TTTTTTCATGCGTGT 100 45
        tyrS  125552 ..  125584 - -16.3  -5.18726   CTCCCATAATAAAAA      GCAGTCCGCTCGGAA AAA TTCCGCACGGACCGC      TTTTTGCCTTGTCTA 100 38
IRT44_RS00725  124862 ..  124883 - -14.5  -5.03994   TTTGATAGAGAAAAA           GAAGTCGGG TTAT CCCGACTTC            TTTTTTTTGCCAAAA 100 80
IRT44_RS00705 NONE
IRT44_RS00700  118573 ..  118588 -  -6.1  -4.38116   GGCAGAAAAAGCAAA              GAGCC TCGTTT GGCTC               CTACGCGAGAATCAC  71 26
IRT44_RS00695 NONE
IRT44_RS00690  116496 ..  116531 - -15.4  -4.56597   CGCCCCGCGCAAAAA    GGCGCTCACACACCGC ACCT GCGGCACGCGAACGCC     TGCTTTCATTTTTAC 100 37
        refZ  115659 ..  115681 -  -2.6  -2.93817   AATTCTCAAGAATCA          CGAGCCGGC TTATCC GCGGGC-CG           GTAGCAGCCACGCTT  41 12
IRT44_RS00680  113020 ..  113037 -  -2.6  -2.81584   AGCGAAGAGAAACAG             GGGCAG CATCAT CTGCGC              TTCACCCCTTTTTCT  39 27
IRT44_RS00675  112597 ..  112620 -   -14  -5.47218   GCGCACCGAAAAAAA          CCTCTTCGTA TTTG TACGAAGAGG           TTTGGTTTGAGAAAA 100 239
        ltrA  110701 ..  110735 -    -8  -3.03525   GGGACTGACATAAAT    CGAGTAGGA-GGGGGT GGTTA ACCCCCGTCCT-CTCA    CACCACCGTACGTAC  62 59
IRT44_RS00655 NONE
IRT44_RS00650  106718 ..  106754 - -10.3   -4.3739   CATTCCGCTATAAAA    CAGCCATGCTGCT TTTCCACTTGG AGCAACATGGCTG    TTTGTTTTTCACTCT  89 34
IRT44_RS00630  103209 ..  103240 - -14.5  -4.56597   GTCCCTGCCCAAAAA      CACACGGCATGCC GTCGCT GACATGCCGTGCG       TTTCATCTTTTTTTT 100 28
IRT44_RS00625 NONE
IRT44_RS00620 NONE
IRT44_RS00615  101296 ..  101325 -  -3.6  -5.44119   CGCAGGGCAAAAAAA       TACTGCCTGAGCA GAATT TGC-CAGACAGTT       TTTTCCGTGCTTAGC  85 36
        codY  100311 ..  100339 - -13.2   -4.3255   GCCGCAACGAACAAA       CACCCGCA-GCGC TGTA ACGCCTGCGGGTG        TGTTTTCCTTTTTGA 100 98
IRT44_RS00595   96676 ..   96707 - -18.8  -3.90112   GGCTGTGGAAGCAAA      GCAGCCGGAAGTGGC CAT GCC-CCTCCGGCTGC      ATCTCCTGTCACTGC 100 34
IRT44_RS00585   95604 ..   95629 - -11.2  -5.13473   AGCACATGGAAAAAA         GACGCATCCC CGGCAC GGGATACGTC          TTTTTTCCTTACTTT 100 34
IRT44_RS00575   94191 ..   94210 - -13.6  -5.24989   TCAGACAGGAAAAAA            CCTCTCCG TCAC CGGAGAGG             TTTTTTCGACGAGGC 100 48
        dapF   92586 ..   92613 - -11.4  -5.00616   TCCTTTGCCAAAAAA        GCCGTCCC-CTAT GTA ATAAAGGGACGGC        CTCGGCCAACGATTT 100 53
IRT44_RS00555 NONE
        thiI NONE
IRT44_RS00545   88580 ..   88608 - -14.6  -4.17906   AATCAAATTAAATAA        GCTGACGCCAGT CGAGT ACAGGCGTCAGC        ATGCGGCCTAACGGC 100 119
IRT44_RS00525   85021 ..   85034 -  -6.7  -2.72471   TCGTCACCAGACAAC               GCACA TGAA TGTGC                CAATCTTTACTTTTG  53 107
         rrf   84878 ..   84902 -    -2  -3.45366   TTTTCAAGGAACGAA         GTTCTGCTGCC GTCA GGCAGCCGC-C          TGGCAACGTCCTACT  46 23
IRT44_RS00515   81800 ..   81822 -  -2.7  -2.51133   GAGCTACCGAGGAAC           GTTGAAGAC TTCGC GCCTTCAAA           ACTGGATATGCATGG  40 58
IRT44_RS00510 NONE
IRT44_RS00505 NONE
IRT44_RS00500   81545 ..   81560 -  -2.4  -3.06796   TCCCAGCTGAGCTAA              GCCTCC ATAT GGTGAC               CCGTAGGGGATTCGA  42 19
IRT44_RS00495 NONE
IRT44_RS00490 NONE
IRT44_RS00485 NONE
IRT44_RS00480 NONE
IRT44_RS00475   81001 ..   81017 -  -2.2  -3.15249   CAGATGCTCTACCAA              CTGAGC TAATG GCTCAT              ATTCATGATAAGGAG  42 44
IRT44_RS00470 NONE
IRT44_RS00465 NONE
IRT44_RS00460 NONE
IRT44_RS00455   80509 ..   80519 -  -8.2  -4.07124   GAGGAGTGACAGAAA                 CGGC GTG GCCG                 GTTCGCTTCCCCCAG  74 63
IRT44_RS00450   80348 ..   80376 -  -2.9  -3.33744   CCCTCCCCCAAAAAC        GTCCGCCTGCTCC CTG GGAGCATCCGTTC        CTTTTTGGGAAAAAA  46 43
IRT44_RS00445   80219 ..   80231 -  -4.7  -2.92668   TACCACTGAACTACA                CCCGC ACG GCGTG                TATTGGTGCCGAGGA  47 29
IRT44_RS00440   80111 ..   80135 - -12.2  -5.43414   ACCACATACAAAAAA          CAGACGGACA TGTAT CGTCCGTCTG          TTTTGCATTGCGTAT 100 39
IRT44_RS00430 NONE
IRT44_RS00425 NONE
IRT44_RS00420 NONE
IRT44_RS00415   75729 ..   75756 - -12.8  -5.34309   ATGATCAAACAAAAA        GGAAAGACACCC GAAC AGGTGCCTTTCC         ACATCCAACCTATTT 100 43
IRT44_RS00410   75381 ..   75395 -  -3.5  -2.62616   TGACGCGGGAGAGGA               GAGAG CGTGC CTCCC               CCCGTCCTGCGAACA  43 47
IRT44_RS00405 NONE
      spoVAC NONE
      spoVAD NONE
      spoVAE   72454 ..   72477 -    -8  -2.70932   GGGGCCGCCGAAGCA          GGCGCCGCCG TCAT CAGCAGCGCG           ACAACAAGCGTCAAC  58 169
        sleB NONE
IRT44_RS00380   71161 ..   71186 - -17.7  -4.77757   CGTCAAAAAGGAAAA         CCCCTTTCCTG TTTG CAGGAAAGGGG          TTACTCGACAATGCC 100 26
IRT44_RS00375   70008 ..   70047 -  -8.7  -5.20216   CAGACCATCAAAAAA  TCCCACCCTTTCCCT GTTAGTATGA ATGGAAAGAGTGGGA   ATTATGTTCCATGTA 100 48
IRT44_RS00370   69308 ..   69321 -  -8.1  -2.92038   GGGAAAACGAGCACA               GTCCG CTTC CGGAC                GTCGATTGTAACAGC  60 42
        ytfJ   68664 ..   68697 - -15.5  -2.52676   TACGCCTGCAATGCA     CAACAGGTATGCC TTTCATGC GGCATACCTGTTG      TTTTCATATGGTCGG  86 47
IRT44_RS00350 NONE
IRT44_RS00345 NONE
         tpx   62552 ..   62572 - -13.3  -3.59262   GTCTACATGCTGAAA            CCCCCTCGT TTG ACGAAGGGG            TTATTGCATAGAACA  86 45
IRT44_RS00330   60117 ..   60175 -  -8.4  -3.57462   CAGCTTACCCCCAAA CCGTCCCGAC-TGCA-TG-CGAAAACAGA GCAT TCCGCTGTCGTCAATGCAAGTCAAGACGG GCATCAGGCGCAAGC  67 259
IRT44_RS00325 NONE
IRT44_RS00320 NONE
IRT44_RS00315 NONE
IRT44_RS00310 NONE
IRT44_RS00305   56138 ..   56151 -  -3.8  -2.85999   CCACCTTACATGATA               TGCG GAAGTA CGCA                GTTGTTGCCGGTTTC  44 41
IRT44_RS00300   55866 ..   55896 - -16.2  -4.86731   GGTCTGCAAAGAAAA      GCGGCAGCTCCCC AAGCAA GGGG-GCTGCCGC       TTTATTGACTCACGG 100 50
        nadE   54116 ..   54154 -  -2.3  -3.90318   CTATTATCGTACAAA  CGCGGCGGAGAATCAACG TCTT CCCCGTTTCTCCGC-GAG   CCGCCGAACGGCAAG  53 75
IRT44_RS00285   53737 ..   53773 -  -6.6  -6.09196   TGCAAAATAAAAAAA   CAAGACCGGTACCGACA GTTT TGTCGAC-CCGGTCTCT    TTTTTTGACGTTCAC 100 92
IRT44_RS00270   51732 ..   51746 -    -5  -2.66274   CTCTTGATAATCAAG               CAGATA TCT CATCTG               TCTGTCCTTCCTCGT  47 41
IRT44_RS00265   50728 ..   50746 -  -5.2  -5.42514   TTATAAATGAAAAAA             GAGCGGAC CCG ATCCGCTT             CAAAAAGTGCTCCGG  91 78
IRT44_RS00260 NONE
IRT44_RS00255 NONE
IRT44_RS00250   47055 ..   47097 - -18.7  -3.75437   AAGCAGCGCACCAAA GCAAAATCCCCCATGGG-TG ATTT CAGCCCATGGGGGATTTTTC ATGTGATGAGTTATA 100 36
IRT44_RS00240   44601 ..   44627 - -10.9   -4.3208   TGCCAGAACGTAAAA         CTCCTCCATTG GTTGT CGATGGAGGAG         TGGTTCTTGTTAAAG  89 115
IRT44_RS00235   42967 ..   42984 - -12.7  -5.86061   GCCCAGCAAAAAAAA             CACCCGG TCTA CCGGGTG              TTTTCTCTGCTCTCT 100 55
IRT44_RS00230   42484 ..   42502 - -10.3  -3.84451   GTCTGCAAATTGAAA             CCCCTTC ACGAA GAAGGGG             TCGGGGGATTGTTAA  82 12
IRT44_RS00225   41625 ..   41638 -  -3.9  -3.20723   TCCTGACGAATCGAA               TGAAT GCTC ATTCA                TTTTTACTCCCCATC  48 83
IRT44_RS00220   39544 ..   39558 -  -3.6  -3.03419   ATGTCCAAATGAAAG               TCTTTC GAC AAAAGA               TCCTATAACCTGACA  46 63
IRT44_RS00215   39151 ..   39172 - -10.1  -3.60792   GCGGGAAGTGTGAAA           GAGCACCCC GTAC AGGGTGCCC            TGCTATTTTTCGGTT  74 28
IRT44_RS00210   38198 ..   38214 -  -7.2  -5.60993   CCCCGCATAAAAAAA              GCCCCC TGCTC GGGGAC              ATGCTTGCGCTGTAC 100 70
IRT44_RS00205   36236 ..   36250 -  -5.6  -4.64598   CAAGCACTGGAAAAA               CAGGCG GGC CACCCG               ATCACGCTGACCAAT  75 518
IRT44_RS00190   33859 ..   33890 -   -16   -5.1861   CCCAGCACCAAAAAA      GGGACACTGCTTCC TCGA AAAAGCAGTGTCCC       TTTTGGTTTCCGTCC 100 59
IRT44_RS00170 NONE
IRT44_RS00165   27478 ..   27520 -   -21  -3.84587   ACGATGGAAACACAA TTCAAACAGAAAAAGAGAGC AAG GCTCTCTTTTTCTACTTGAA GATTTCTTTCGCCTG 100 17
IRT44_RS00160 NONE
IRT44_RS00155 NONE
IRT44_RS00150   24603 ..   24626 - -11.7  -4.75174   CAGCGAATGGAAAAA          GCCTCCCCG TCACTT CGGGAAGGC           TCAAGCATGTAAACG 100 48
IRT44_RS00140 NONE
IRT44_RS00135   20847 ..   20872 -  -8.3   -5.1971   ACCAAAAATGAAAAA         CGGACCCCA ATCCACTG TGAGGTCCG          CACATCGTTTTTCAG  93 77
        surE NONE
IRT44_RS00125 NONE
IRT44_RS00120   18677 ..   18691 -  -4.3   -3.0644   ACGCAAGGTTGAACA               GAGTA CATCC TACTC               ACCCTTCCCGGCAGA  48 208
IRT44_RS00115 NONE
IRT44_RS00110   17196 ..   17243 - -20.2  -3.61889   GAAAAAGGCTTGAAA CCAAACAACGCCCCTGGTACG AAAAAAG CGTAC-AGGGGCGTTGTTTAG CTTGCATGCATAATG 100 120
IRT44_RS00075   11131 ..   11143 -  -4.8   -3.1552   GTTTATGCATGAACA                TGCC CGCCC GGCA                GCCAGACGGCTGTCA  48 0
IRT44_RS00070   10853 ..   10863 -  -2.4  -4.56775   AGTCTGCTGGAAAAA                 CGCG AAA CGGG                 ACCGCTTCCATCGGT  62 40
        fabI    9955 ..    9988 - -13.9  -5.46698   CTGAAAACGAAAAAA     CCCCTGCGCCCGGC CGTACAT GCCGGA-GCAGGGG     TTTGCGTTTTTATCG 100 35
IRT44_RS00050 NONE
IRT44_RS00045 NONE
IRT44_RS00040    3408 ..    3420 -  -3.4  -4.38712   CTTATGTCGACAAAA                TGCT CCGGC AGCA                AGGATTTCACCGTTC  61 307
IRT44_RS00035 NONE
IRT44_RS00030    2465 ..    2496 - -10.9  -5.11033   TATAAGTGTAAAAAA      CAACCCCGCAGTCC TCATC GGAC-GCGGGGTTT      CATTGTGCAGTGTTA 100 38
