locus-tag class description APS55_RS00015 IPR003593 AAA+ ATPase domain APS55_RS00015 IPR003439 ABC transporter-like APS55_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00015 IPR017871 ABC transporter, conserved site APS55_RS00020 IPR004872 Lipoprotein NlpA family APS55_RS00025 IPR035906 MetI-like superfamily APS55_RS00025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS00030 IPR003439 ABC transporter-like APS55_RS00030 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00030 IPR017871 ABC transporter, conserved site APS55_RS00030 IPR003593 AAA+ ATPase domain APS55_RS00030 IPR018449 NIL domain APS55_RS00030 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APS55_RS00030 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APS55_RS00035 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site APS55_RS00035 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB APS55_RS00035 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA APS55_RS00045 IPR004753 Cell shape determining protein MreB APS55_RS00050 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APS55_RS00050 IPR036968 Enolpyruvate transferase domain superfamily APS55_RS00050 IPR001986 Enolpyruvate transferase domain APS55_RS00050 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase APS55_RS00060 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily APS55_RS00060 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit APS55_RS00060 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APS55_RS00060 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal APS55_RS00060 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal APS55_RS00065 IPR005722 ATP synthase, F1 complex, beta subunit APS55_RS00065 IPR003593 AAA+ ATPase domain APS55_RS00065 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APS55_RS00065 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APS55_RS00065 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00065 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APS55_RS00065 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal APS55_RS00065 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APS55_RS00070 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily APS55_RS00070 IPR000131 ATP synthase, F1 complex, gamma subunit APS55_RS00075 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APS55_RS00075 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily APS55_RS00075 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00075 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily APS55_RS00075 IPR000793 ATP synthase, alpha subunit, C-terminal APS55_RS00075 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APS55_RS00075 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APS55_RS00075 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain APS55_RS00075 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APS55_RS00075 IPR005294 ATP synthase, F1 complex, alpha subunit APS55_RS00080 IPR020781 ATPase, OSCP/delta subunit, conserved site APS55_RS00080 IPR000711 ATPase, OSCP/delta subunit APS55_RS00080 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily APS55_RS00085 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily APS55_RS00085 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast APS55_RS00085 IPR005864 ATP synthase, F0 complex, subunit b, bacterial APS55_RS00090 IPR000454 ATP synthase, F0 complex, subunit C APS55_RS00090 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site APS55_RS00090 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast APS55_RS00090 IPR038662 F1F0 ATP synthase subunit C superfamily APS55_RS00090 IPR035921 F/V-ATP synthase subunit C superfamily APS55_RS00090 IPR002379 V-ATPase proteolipid subunit C-like domain APS55_RS00095 IPR000568 ATP synthase, F0 complex, subunit A APS55_RS00095 IPR035908 ATP synthase, F0 complex, subunit A superfamily APS55_RS00105 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site APS55_RS00105 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS00105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS00105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS00105 IPR039429 Serine hydroxymethyltransferase-like domain APS55_RS00105 IPR001085 Serine hydroxymethyltransferase APS55_RS00110 IPR006070 YrdC-like domain APS55_RS00110 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 APS55_RS00110 IPR005145 Putative GTP-binding controlling metal-binding domain APS55_RS00110 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APS55_RS00110 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily APS55_RS00115 IPR004556 Methyltransferase HemK-like APS55_RS00115 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APS55_RS00115 IPR040758 Release factor glutamine methyltransferase, N-terminal domain APS55_RS00115 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific APS55_RS00115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS00115 IPR007848 Methyltransferase small domain APS55_RS00120 IPR004373 Peptide chain release factor 1 APS55_RS00120 IPR005139 Peptide chain release factor APS55_RS00120 IPR000352 Peptide chain release factor class I APS55_RS00125 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00125 IPR020633 Thymidine kinase, conserved site APS55_RS00125 IPR001267 Thymidine kinase APS55_RS00130 IPR036565 Mur-like, catalytic domain superfamily APS55_RS00130 IPR013221 Mur ligase, central APS55_RS00130 IPR013564 Domain of unknown function DUF1727 APS55_RS00135 IPR011698 CobB/CobQ-like glutamine amidotransferase APS55_RS00135 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 APS55_RS00135 IPR017929 CobB/CobQ glutamine amidotransferase APS55_RS00135 IPR029062 Class I glutamine amidotransferase-like APS55_RS00140 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS00140 IPR001466 Beta-lactamase-related APS55_RS00145 IPR003439 ABC transporter-like APS55_RS00145 IPR003593 AAA+ ATPase domain APS55_RS00145 IPR011527 ABC transporter type 1, transmembrane domain APS55_RS00145 IPR036640 ABC transporter type 1, transmembrane domain superfamily APS55_RS00145 IPR039421 Type I protein exporter APS55_RS00145 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00150 IPR011527 ABC transporter type 1, transmembrane domain APS55_RS00150 IPR036640 ABC transporter type 1, transmembrane domain superfamily APS55_RS00150 IPR003593 AAA+ ATPase domain APS55_RS00150 IPR017871 ABC transporter, conserved site APS55_RS00150 IPR039421 Type I protein exporter APS55_RS00150 IPR003439 ABC transporter-like APS55_RS00150 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00165 IPR036380 Isochorismatase-like superfamily APS55_RS00165 IPR000868 Isochorismatase-like APS55_RS00175 IPR009732 Protein of unknown function DUF1304 APS55_RS00350 IPR001091 Restriction/modification DNA-methylase APS55_RS00350 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APS55_RS00350 IPR002941 DNA methylase N-4/N-6 APS55_RS00350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS00400 IPR002611 IstB-like ATP-binding protein APS55_RS00400 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APS55_RS00400 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00410 IPR011344 Single-stranded DNA-binding protein APS55_RS00410 IPR000424 Primosome PriB/single-strand DNA-binding APS55_RS00410 IPR012340 Nucleic acid-binding, OB-fold APS55_RS00465 IPR006197 Peptidase S24, LexA-like APS55_RS00465 IPR015927 Peptidase S24/S26A/S26B/S26C APS55_RS00465 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS00465 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS00465 IPR036286 LexA/Signal peptidase-like superfamily APS55_RS00465 IPR006199 LexA repressor, DNA-binding domain APS55_RS00465 IPR039418 LexA-like APS55_RS00465 IPR006200 Transcription regulator LexA APS55_RS00535 IPR008258 Transglycosylase SLT domain 1 APS55_RS00535 IPR023346 Lysozyme-like domain superfamily APS55_RS00550 IPR036397 Ribonuclease H superfamily APS55_RS00550 IPR012337 Ribonuclease H-like superfamily APS55_RS00550 IPR038965 Transposase InsF-like APS55_RS00550 IPR001584 Integrase, catalytic core APS55_RS00565 IPR013154 Alcohol dehydrogenase, N-terminal APS55_RS00565 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APS55_RS00565 IPR014043 Acyl transferase APS55_RS00565 IPR036736 ACP-like superfamily APS55_RS00565 IPR001227 Acyl transferase domain superfamily APS55_RS00565 IPR020806 Polyketide synthase, phosphopantetheine-binding domain APS55_RS00565 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APS55_RS00565 IPR036291 NAD(P)-binding domain superfamily APS55_RS00565 IPR020807 Polyketide synthase, dehydratase domain APS55_RS00565 IPR042104 Polyketide synthase, dehydratase domain superfamily APS55_RS00565 IPR011032 GroES-like superfamily APS55_RS00565 IPR006162 Phosphopantetheine attachment site APS55_RS00565 IPR009081 Phosphopantetheine binding ACP domain APS55_RS00565 IPR013968 Polyketide synthase, ketoreductase domain APS55_RS00565 IPR020843 Polyketide synthase, enoylreductase domain APS55_RS00570 IPR037479 Tautomerase, MSAD family APS55_RS00570 IPR014347 Tautomerase/MIF superfamily APS55_RS00575 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APS55_RS00575 IPR012340 Nucleic acid-binding, OB-fold APS55_RS00575 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb APS55_RS00575 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APS55_RS00575 IPR004522 Asparagine-tRNA ligase APS55_RS00575 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS00580 IPR029039 Flavoprotein-like superfamily APS55_RS00580 IPR003680 Flavodoxin-like fold APS55_RS00585 IPR025948 HTH-like domain APS55_RS00585 IPR038965 Transposase InsF-like APS55_RS00585 IPR001584 Integrase, catalytic core APS55_RS00585 IPR012337 Ribonuclease H-like superfamily APS55_RS00585 IPR036397 Ribonuclease H superfamily APS55_RS00605 IPR010651 Sugar transport protein APS55_RS00615 IPR004638 Drug resistance transporter EmrB-like APS55_RS00615 IPR011701 Major facilitator superfamily APS55_RS00615 IPR036259 MFS transporter superfamily APS55_RS00615 IPR020846 Major facilitator superfamily domain APS55_RS00615 IPR023721 Multidrug resistance protein MdtD APS55_RS00620 IPR036291 NAD(P)-binding domain superfamily APS55_RS00620 IPR020904 Short-chain dehydrogenase/reductase, conserved site APS55_RS00620 IPR002347 Short-chain dehydrogenase/reductase SDR APS55_RS00630 IPR003855 Potassium transporter APS55_RS00630 IPR023051 Potassium uptake protein, low affinity, Kup APS55_RS00635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS00635 IPR004839 Aminotransferase, class I/classII APS55_RS00635 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS00635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS00650 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00650 IPR015860 ABC transporter, teichoic acids export, TagH APS55_RS00650 IPR017871 ABC transporter, conserved site APS55_RS00650 IPR003439 ABC transporter-like APS55_RS00650 IPR003593 AAA+ ATPase domain APS55_RS00655 IPR036779 LysM domain superfamily APS55_RS00655 IPR018392 LysM domain APS55_RS00655 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain APS55_RS00660 IPR001347 Sugar isomerase (SIS) APS55_RS00660 IPR029055 Nucleophile aminohydrolases, N-terminal APS55_RS00660 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising APS55_RS00660 IPR035466 GlmS/AgaS, SIS domain 1 APS55_RS00660 IPR017932 Glutamine amidotransferase type 2 domain APS55_RS00660 IPR035490 GlmS/FrlB, SIS domain 2 APS55_RS00665 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APS55_RS00665 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APS55_RS00665 IPR005841 Alpha-D-phosphohexomutase superfamily APS55_RS00665 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APS55_RS00665 IPR006352 Phosphoglucosamine mutase, bacterial type APS55_RS00665 IPR016066 Alpha-D-phosphohexomutase, conserved site APS55_RS00665 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APS55_RS00665 IPR005843 Alpha-D-phosphohexomutase, C-terminal APS55_RS00665 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APS55_RS00670 IPR012505 YbbR-like APS55_RS00675 IPR034701 Diadenylate cyclase CdaA APS55_RS00675 IPR003390 DNA integrity scanning protein, DisA, N-terminal APS55_RS00675 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily APS55_RS00675 IPR014046 Diadenylate cyclase APS55_RS00685 IPR006153 Cation/H+ exchanger APS55_RS00685 IPR018422 Cation/H+ exchanger, CPA1 family APS55_RS00685 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria APS55_RS00690 IPR016167 FAD-binding, type PCMH, subdomain 1 APS55_RS00690 IPR016169 FAD-binding, type PCMH, subdomain 2 APS55_RS00690 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase APS55_RS00690 IPR016166 FAD-binding domain, PCMH-type APS55_RS00690 IPR006094 FAD linked oxidase, N-terminal APS55_RS00690 IPR036318 FAD-binding, type PCMH-like superfamily APS55_RS00690 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal APS55_RS00690 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily APS55_RS00695 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type APS55_RS00695 IPR012337 Ribonuclease H-like superfamily APS55_RS00695 IPR036397 Ribonuclease H superfamily APS55_RS00695 IPR004013 PHP domain APS55_RS00695 IPR012340 Nucleic acid-binding, OB-fold APS55_RS00695 IPR013520 Exonuclease, RNase T/DNA polymerase III APS55_RS00695 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain APS55_RS00695 IPR029460 DNA polymerase, helix-hairpin-helix motif APS55_RS00695 IPR028112 DNA polymerase III polC-type, N-terminal domain I APS55_RS00695 IPR024754 DNA polymerase III polC-like, N-terminal domain II APS55_RS00695 IPR040982 DNA polymerase III alpha subunit finger domain APS55_RS00695 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain APS55_RS00695 IPR003141 Polymerase/histidinol phosphatase, N-terminal APS55_RS00705 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE APS55_RS00705 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00710 IPR012147 Phosphate acetyl/butyryltransferase APS55_RS00710 IPR042113 Phosphate acetyltransferase, domain 1 APS55_RS00710 IPR004614 Phosphate acetyltransferase APS55_RS00710 IPR002505 Phosphate acetyl/butaryl transferase APS55_RS00710 IPR042112 Phosphate acetyltransferase, domain 2 APS55_RS00715 IPR002043 Uracil-DNA glycosylase family 1 APS55_RS00715 IPR018085 Uracil-DNA glycosylase, active site APS55_RS00715 IPR005122 Uracil-DNA glycosylase-like APS55_RS00715 IPR036895 Uracil-DNA glycosylase-like domain superfamily APS55_RS00720 IPR023620 Small protein B APS55_RS00720 IPR020081 SsrA-binding protein, conserved site APS55_RS00720 IPR000037 SsrA-binding protein APS55_RS00725 IPR011805 Ribonuclease R APS55_RS00725 IPR022967 RNA-binding domain, S1 APS55_RS00725 IPR003029 S1 domain APS55_RS00725 IPR022966 Ribonuclease II/R, conserved site APS55_RS00725 IPR004476 Ribonuclease II/ribonuclease R APS55_RS00725 IPR001900 Ribonuclease II/R APS55_RS00725 IPR013223 Ribonuclease B, N-terminal OB domain APS55_RS00725 IPR012340 Nucleic acid-binding, OB-fold APS55_RS00725 IPR040476 RNase II/RNase R, cold shock domain APS55_RS00730 IPR004692 Preprotein translocase SecG subunit APS55_RS00735 IPR014743 Chloride channel, core APS55_RS00735 IPR023861 Chloride channel, ClcA APS55_RS00735 IPR001807 Chloride channel, voltage gated APS55_RS00740 IPR020811 Enolase, N-terminal APS55_RS00740 IPR020809 Enolase, conserved site APS55_RS00740 IPR020810 Enolase, C-terminal TIM barrel domain APS55_RS00740 IPR029017 Enolase-like, N-terminal APS55_RS00740 IPR036849 Enolase-like, C-terminal domain superfamily APS55_RS00740 IPR000941 Enolase APS55_RS00745 IPR013785 Aldolase-type TIM barrel APS55_RS00745 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic APS55_RS00745 IPR035990 Triosephosphate isomerase superfamily APS55_RS00745 IPR020861 Triosephosphate isomerase, active site APS55_RS00745 IPR000652 Triosephosphate isomerase APS55_RS00750 IPR015911 Phosphoglycerate kinase, conserved site APS55_RS00750 IPR015824 Phosphoglycerate kinase, N-terminal APS55_RS00750 IPR036043 Phosphoglycerate kinase superfamily APS55_RS00750 IPR001576 Phosphoglycerate kinase APS55_RS00755 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I APS55_RS00755 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain APS55_RS00755 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain APS55_RS00755 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family APS55_RS00755 IPR036291 NAD(P)-binding domain superfamily APS55_RS00765 IPR018215 ClpP, Ser active site APS55_RS00765 IPR033135 ClpP, histidine active site APS55_RS00765 IPR001907 ATP-dependent Clp protease proteolytic subunit APS55_RS00765 IPR029045 ClpP/crotonase-like domain superfamily APS55_RS00765 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APS55_RS00770 IPR039518 WhiA, LAGLIDADG-like domain APS55_RS00770 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS00770 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain APS55_RS00770 IPR027434 Homing endonuclease APS55_RS00770 IPR023054 Sporulation regulator WhiA, C-terminal APS55_RS00770 IPR003802 Sporulation regulator WhiA APS55_RS00775 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 APS55_RS00775 IPR010119 Gluconeogenesis factor APS55_RS00775 IPR038136 Gluconeogenesis factor superfamily APS55_RS00780 IPR003593 AAA+ ATPase domain APS55_RS00780 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00780 IPR003439 ABC transporter-like APS55_RS00780 IPR017871 ABC transporter, conserved site APS55_RS00780 IPR041102 UvrA, interaction domain APS55_RS00780 IPR041552 UvrA DNA-binding domain APS55_RS00780 IPR004602 UvrABC system subunit A APS55_RS00785 IPR001650 Helicase, C-terminal APS55_RS00785 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00785 IPR001943 UVR domain APS55_RS00785 IPR006935 Helicase/UvrB, N-terminal APS55_RS00785 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS00785 IPR036876 UVR domain superfamily APS55_RS00785 IPR024759 UvrB, YAD/RRR-motif-containing domain APS55_RS00785 IPR041471 UvrB, interaction domain APS55_RS00785 IPR004807 UvrABC system, subunit B APS55_RS00790 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site APS55_RS00790 IPR005982 Thioredoxin reductase APS55_RS00790 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS00790 IPR023753 FAD/NAD(P)-binding domain APS55_RS00795 IPR005835 Nucleotidyl transferase domain APS55_RS00795 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type APS55_RS00795 IPR029044 Nucleotide-diphospho-sugar transferases APS55_RS00800 IPR036291 NAD(P)-binding domain superfamily APS55_RS00800 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent APS55_RS00800 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APS55_RS00800 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APS55_RS00800 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal APS55_RS00800 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal APS55_RS00805 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt APS55_RS00810 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal APS55_RS00810 IPR011104 HPr kinase/phosphorylase, C-terminal APS55_RS00810 IPR003755 HPr(Ser) kinase/phosphorylase APS55_RS00810 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily APS55_RS00815 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV APS55_RS00820 IPR007168 Phage shock protein, PspC, N-terminal APS55_RS00825 IPR036034 PDZ superfamily APS55_RS00825 IPR041489 PDZ domain 6 APS55_RS00825 IPR001478 PDZ domain APS55_RS00835 IPR011115 SecA DEAD-like, N-terminal APS55_RS00835 IPR036266 SecA, Wing/Scaffold superfamily APS55_RS00835 IPR011116 SecA Wing/Scaffold APS55_RS00835 IPR036670 SecA, preprotein cross-linking domain superfamily APS55_RS00835 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00835 IPR014018 SecA motor DEAD APS55_RS00835 IPR000185 Protein translocase subunit SecA APS55_RS00835 IPR020937 SecA conserved site APS55_RS00835 IPR011130 SecA, preprotein cross-linking domain APS55_RS00845 IPR006935 Helicase/UvrB, N-terminal APS55_RS00845 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00845 IPR001650 Helicase, C-terminal APS55_RS00845 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS00850 IPR035647 EF-G domain III/V-like APS55_RS00850 IPR023582 Impact family APS55_RS00850 IPR015796 Impact family, bacterial/archaeal APS55_RS00850 IPR001498 Impact, N-terminal APS55_RS00850 IPR036956 Impact, N-terminal domain superfamily APS55_RS00850 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APS55_RS00850 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APS55_RS00850 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS00855 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site APS55_RS00855 IPR000715 Glycosyl transferase, family 4 APS55_RS00860 IPR027413 GroEL-like equatorial domain superfamily APS55_RS00860 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APS55_RS00860 IPR027409 GroEL-like apical domain superfamily APS55_RS00860 IPR002423 Chaperonin Cpn60/TCP-1 family APS55_RS00860 IPR001844 Chaperonin Cpn60 APS55_RS00860 IPR018370 Chaperonin Cpn60, conserved site APS55_RS00865 IPR011032 GroES-like superfamily APS55_RS00865 IPR018369 Chaperonin GroES, conserved site APS55_RS00865 IPR037124 GroES chaperonin superfamily APS55_RS00865 IPR020818 GroES chaperonin family APS55_RS00870 IPR036291 NAD(P)-binding domain superfamily APS55_RS00870 IPR009718 Rex DNA-binding, C-terminal domain APS55_RS00870 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS00870 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS00870 IPR022876 Redox-sensing transcriptional repressor Rex APS55_RS00870 IPR003781 CoA-binding APS55_RS00875 IPR017871 ABC transporter, conserved site APS55_RS00875 IPR032524 ABC transporter Uup, C-terminal APS55_RS00875 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily APS55_RS00875 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00875 IPR003439 ABC transporter-like APS55_RS00875 IPR003593 AAA+ ATPase domain APS55_RS00875 IPR032781 ABC-transporter extension domain APS55_RS00880 IPR000905 Gcp-like domain APS55_RS00880 IPR017861 Kae1/TsaD family APS55_RS00880 IPR017860 Peptidase M22, conserved site APS55_RS00880 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD APS55_RS00890 IPR000905 Gcp-like domain APS55_RS00890 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB APS55_RS00900 IPR035996 Tetrapyrrole methylase superfamily APS55_RS00900 IPR000878 Tetrapyrrole methylase APS55_RS00900 IPR014777 Tetrapyrrole methylase, subdomain 1 APS55_RS00900 IPR014776 Tetrapyrrole methylase, subdomain 2 APS55_RS00900 IPR008189 rRNA small subunit methyltransferase I APS55_RS00900 IPR018063 SAM-dependent methyltransferase RsmI, conserved site APS55_RS00905 IPR010377 Initiation control protein YabA APS55_RS00910 IPR004622 DNA polymerase III, delta prime subunit APS55_RS00910 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00910 IPR015199 DNA polymerase III, delta subunit, C-terminal APS55_RS00915 IPR011322 Nitrogen regulatory PII-like, alpha/beta APS55_RS00915 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APS55_RS00915 IPR010375 Cyclic-di-AMP receptor APS55_RS00920 IPR018095 Thymidylate kinase, conserved site APS55_RS00920 IPR018094 Thymidylate kinase APS55_RS00920 IPR039430 Thymidylate kinase-like domain APS55_RS00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00930 IPR006171 TOPRIM domain APS55_RS00930 IPR015967 Recombination protein RecR, conserved site APS55_RS00930 IPR023628 Recombination protein RecR, C4-type zinc finger APS55_RS00930 IPR023627 Recombination protein RecR APS55_RS00930 IPR000093 DNA recombination protein RecR APS55_RS00930 IPR034137 RecR, TOPRIM domain APS55_RS00935 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily APS55_RS00935 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS55_RS00940 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS00940 IPR012763 DNA polymerase III, subunit gamma/ tau APS55_RS00940 IPR022754 DNA polymerase III, gamma subunit, domain III APS55_RS00940 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APS55_RS00940 IPR003593 AAA+ ATPase domain APS55_RS00940 IPR001270 ClpA/B family APS55_RS00950 IPR002125 Cytidine and deoxycytidylate deaminase domain APS55_RS00950 IPR016193 Cytidine deaminase-like APS55_RS00950 IPR016192 APOBEC/CMP deaminase, zinc-binding APS55_RS00950 IPR028883 tRNA-specific adenosine deaminase APS55_RS00955 IPR007848 Methyltransferase small domain APS55_RS00955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS00960 IPR011909 Glutaredoxin-like protein NrdH APS55_RS00960 IPR036249 Thioredoxin-like superfamily APS55_RS00960 IPR002109 Glutaredoxin APS55_RS00965 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal APS55_RS00965 IPR013554 Ribonucleotide reductase N-terminal APS55_RS00965 IPR013509 Ribonucleotide reductase large subunit, N-terminal APS55_RS00965 IPR000788 Ribonucleotide reductase large subunit, C-terminal APS55_RS00965 IPR039718 Ribonucleoside-diphosphate reductase large subunit APS55_RS00965 IPR013346 Ribonucleotide reductase, class I , alpha subunit APS55_RS00965 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE APS55_RS00970 IPR033909 Ribonucleotide reductase small subunit APS55_RS00970 IPR026494 Ribonucleoside reductase subunit beta, NrdF APS55_RS00970 IPR012348 Ribonucleotide reductase-like APS55_RS00970 IPR009078 Ferritin-like superfamily APS55_RS00970 IPR000358 Ribonucleotide reductase small subunit family APS55_RS00970 IPR030475 Ribonucleotide reductase small subunit, acitve site APS55_RS00975 IPR016181 Acyl-CoA N-acyltransferase APS55_RS00975 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APS55_RS00975 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal APS55_RS00980 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily APS55_RS00980 IPR013823 Ribosomal protein L7/L12, C-terminal APS55_RS00980 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APS55_RS00980 IPR000206 Ribosomal protein L7/L12 APS55_RS00980 IPR008932 Ribosomal protein L7/L12, oligomerisation APS55_RS00985 IPR001790 Ribosomal protein L10P APS55_RS00985 IPR002363 Ribosomal protein L10, eubacterial, conserved site APS55_RS00985 IPR022973 Ribosomal protein L10 APS55_RS00990 IPR005878 Ribosomal protein L1, bacterial-type APS55_RS00990 IPR002143 Ribosomal protein L1 APS55_RS00990 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APS55_RS00990 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APS55_RS00990 IPR023673 Ribosomal protein L1, conserved site APS55_RS00990 IPR023674 Ribosomal protein L1-like APS55_RS00995 IPR020783 Ribosomal protein L11, C-terminal APS55_RS00995 IPR020785 Ribosomal protein L11, conserved site APS55_RS00995 IPR020784 Ribosomal protein L11, N-terminal APS55_RS00995 IPR006519 Ribosomal protein L11, bacterial-type APS55_RS00995 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily APS55_RS00995 IPR000911 Ribosomal protein L11/L12 APS55_RS00995 IPR036769 Ribosomal protein L11, C-terminal domain superfamily APS55_RS01000 IPR008991 Translation protein SH3-like domain superfamily APS55_RS01000 IPR006645 NusG, N-terminal APS55_RS01000 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APS55_RS01000 IPR001062 Transcription antitermination protein, NusG APS55_RS01000 IPR014722 Ribosomal protein L2, domain 2 APS55_RS01000 IPR036735 NusG, N-terminal domain superfamily APS55_RS01000 IPR005824 KOW APS55_RS01005 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit APS55_RS01005 IPR038379 SecE superfamily APS55_RS01005 IPR005807 SecE subunit of protein translocation complex, bacterial-like APS55_RS01010 IPR011332 Zinc-binding ribosomal protein APS55_RS01010 IPR001705 Ribosomal protein L33 APS55_RS01010 IPR038584 Ribosomal protein L33 superfamily APS55_RS01020 IPR010298 Protein of unknown function DUF901 APS55_RS01025 IPR001537 tRNA/rRNA methyltransferase, SpoU type APS55_RS01025 IPR013123 RNA 2-O ribose methyltransferase, substrate binding APS55_RS01025 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS55_RS01025 IPR029028 Alpha/beta knot methyltransferases APS55_RS01025 IPR029064 50S ribosomal protein L30e-like APS55_RS01025 IPR004441 RNA methyltransferase TrmH family APS55_RS01030 IPR000999 Ribonuclease III domain APS55_RS01030 IPR036389 Ribonuclease III, endonuclease domain superfamily APS55_RS01030 IPR008226 Mini-ribonuclease 3 family APS55_RS01035 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR APS55_RS01035 IPR015803 Cysteine-tRNA ligase APS55_RS01035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01035 IPR032678 tRNA synthetases class I, catalytic domain APS55_RS01035 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APS55_RS01035 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase APS55_RS01040 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 APS55_RS01040 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS01040 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial APS55_RS01040 IPR000924 Glutamyl/glutaminyl-tRNA synthetase APS55_RS01040 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain APS55_RS01040 IPR033910 Glutamyl-tRNA synthetase APS55_RS01040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01040 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding APS55_RS01045 IPR002716 PIN domain APS55_RS01045 IPR029060 PIN-like domain superfamily APS55_RS01045 IPR002792 TRAM domain APS55_RS01050 IPR003593 AAA+ ATPase domain APS55_RS01050 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01050 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain APS55_RS01050 IPR004504 DNA repair protein RadA APS55_RS01050 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS01050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS01050 IPR041166 LapB, rubredoxin metal binding domain APS55_RS01055 IPR029054 dUTPase-like APS55_RS01055 IPR036157 dUTPase-like superfamily APS55_RS01055 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase APS55_RS01055 IPR033704 dUTPase, trimeric APS55_RS01060 IPR037171 NagB/RpiA transferase-like APS55_RS01060 IPR004788 Ribose 5-phosphate isomerase, type A APS55_RS01060 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup APS55_RS01065 IPR004134 Peptidase C1B, bleomycin hydrolase APS55_RS01065 IPR038765 Papain-like cysteine peptidase superfamily APS55_RS01065 IPR025660 Cysteine peptidase, histidine active site APS55_RS01065 IPR000169 Cysteine peptidase, cysteine active site APS55_RS01070 IPR029033 Histidine phosphatase superfamily APS55_RS01070 IPR005952 Phosphoglycerate mutase 1 APS55_RS01070 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site APS55_RS01070 IPR013078 Histidine phosphatase superfamily, clade-1 APS55_RS01075 IPR000620 EamA domain APS55_RS01080 IPR004474 Cell envelope-related transcriptional attenuator domain APS55_RS01080 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU APS55_RS01100 IPR013750 GHMP kinase, C-terminal domain APS55_RS01100 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS01100 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS01100 IPR000870 Homoserine kinase APS55_RS01100 IPR036554 GHMP kinase, C-terminal domain superfamily APS55_RS01100 IPR006204 GHMP kinase N-terminal domain APS55_RS01100 IPR006203 GHMP kinase, ATP-binding, conserved site APS55_RS01105 IPR023524 Uncharacterised protein family SprT-like APS55_RS01105 IPR006640 SprT-like APS55_RS01110 IPR018974 Tex-like protein, N-terminal APS55_RS01110 IPR032639 Tex protein, YqgF-like domain APS55_RS01110 IPR006641 YqgF/RNase H-like domain APS55_RS01110 IPR023319 Tex-like protein, HTH domain superfamily APS55_RS01110 IPR037027 YqgF/RNase H-like domain superfamily APS55_RS01110 IPR022967 RNA-binding domain, S1 APS55_RS01110 IPR010994 RuvA domain 2-like APS55_RS01110 IPR012337 Ribonuclease H-like superfamily APS55_RS01110 IPR012340 Nucleic acid-binding, OB-fold APS55_RS01110 IPR041692 HHH domain 9 APS55_RS01110 IPR003029 S1 domain APS55_RS01110 IPR023323 Tex-like domain superfamily APS55_RS01120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01120 IPR022926 NH(3)-dependent NAD(+) synthetase APS55_RS01120 IPR003694 NAD(+) synthetase APS55_RS01120 IPR022310 NAD/GMP synthase APS55_RS01125 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase APS55_RS01125 IPR013785 Aldolase-type TIM barrel APS55_RS01125 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal APS55_RS01125 IPR006405 Nicotinate phosphoribosyltransferase pncB-type APS55_RS01125 IPR007229 Nicotinate phosphoribosyltransferase family APS55_RS01125 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain APS55_RS01125 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain APS55_RS01130 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase APS55_RS01130 IPR004629 Glycosyl transferase WecB/TagA/CpsF APS55_RS01135 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS01135 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS01135 IPR011663 UbiC transcription regulator-associated APS55_RS01135 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APS55_RS01135 IPR000524 Transcription regulator HTH, GntR APS55_RS01140 IPR000304 Pyrroline-5-carboxylate reductase APS55_RS01140 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain APS55_RS01140 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APS55_RS01140 IPR036291 NAD(P)-binding domain superfamily APS55_RS01140 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APS55_RS01155 IPR005279 Dipeptide/tripeptide permease APS55_RS01155 IPR020846 Major facilitator superfamily domain APS55_RS01155 IPR036259 MFS transporter superfamily APS55_RS01155 IPR000109 Proton-dependent oligopeptide transporter family APS55_RS01155 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site APS55_RS01195 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal APS55_RS01195 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APS55_RS01195 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APS55_RS01195 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS01195 IPR012340 Nucleic acid-binding, OB-fold APS55_RS01195 IPR002313 Lysine-tRNA ligase, class II APS55_RS01200 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal APS55_RS01200 IPR035587 DUS-like, FMN-binding domain APS55_RS01200 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 APS55_RS01200 IPR018517 tRNA-dihydrouridine synthase, conserved site APS55_RS01200 IPR001269 tRNA-dihydrouridine synthase APS55_RS01200 IPR013785 Aldolase-type TIM barrel APS55_RS01205 IPR000397 Heat shock protein Hsp33 APS55_RS01205 IPR016154 Heat shock protein Hsp33, C-terminal APS55_RS01205 IPR016153 Heat shock protein Hsp33, N-terminal APS55_RS01210 IPR041569 AAA ATPase, AAA+ lid domain APS55_RS01210 IPR003593 AAA+ ATPase domain APS55_RS01210 IPR037219 Peptidase M41-like APS55_RS01210 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01210 IPR000642 Peptidase M41 APS55_RS01210 IPR003959 ATPase, AAA-type, core APS55_RS01210 IPR011546 Peptidase M41, FtsH extracellular APS55_RS01210 IPR003960 ATPase, AAA-type, conserved site APS55_RS01210 IPR005936 Peptidase, FtsH APS55_RS01215 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APS55_RS01215 IPR012094 tRNA(Ile)-lysidine synthase APS55_RS01215 IPR005904 Hypoxanthine phosphoribosyl transferase APS55_RS01215 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal APS55_RS01215 IPR000836 Phosphoribosyltransferase domain APS55_RS01215 IPR029057 Phosphoribosyltransferase-like APS55_RS01215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01215 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal APS55_RS01220 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal APS55_RS01220 IPR012094 tRNA(Ile)-lysidine synthase APS55_RS01220 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal APS55_RS01220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01220 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APS55_RS01225 IPR012340 Nucleic acid-binding, OB-fold APS55_RS01225 IPR022967 RNA-binding domain, S1 APS55_RS01225 IPR003029 S1 domain APS55_RS01235 IPR002942 RNA-binding S4 domain APS55_RS01235 IPR036986 RNA-binding S4 domain superfamily APS55_RS01235 IPR025490 RNA-binding protein, HP1423 type APS55_RS01240 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type APS55_RS01240 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APS55_RS01240 IPR002797 Polysaccharide biosynthesis protein APS55_RS01245 IPR036101 CarD-like/TRCF domain superfamily APS55_RS01245 IPR003711 CarD-like/TRCF domain APS55_RS01245 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01245 IPR011545 DEAD/DEAH box helicase domain APS55_RS01245 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS01245 IPR001650 Helicase, C-terminal APS55_RS01245 IPR004576 Transcription-repair coupling factor APS55_RS01245 IPR037235 TRCF-like, C-terminal domain APS55_RS01245 IPR041471 UvrB, interaction domain APS55_RS01245 IPR005118 Transcription-repair-coupling factor, C-terminal domain APS55_RS01250 IPR036416 Peptidyl-tRNA hydrolase superfamily APS55_RS01250 IPR018171 Peptidyl-tRNA hydrolase, conserved site APS55_RS01250 IPR001328 Peptidyl-tRNA hydrolase APS55_RS01255 IPR001557 L-lactate/malate dehydrogenase APS55_RS01255 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal APS55_RS01255 IPR001236 Lactate/malate dehydrogenase, N-terminal APS55_RS01255 IPR022383 Lactate/malate dehydrogenase, C-terminal APS55_RS01255 IPR018177 L-lactate dehydrogenase, active site APS55_RS01255 IPR011304 L-lactate dehydrogenase APS55_RS01255 IPR036291 NAD(P)-binding domain superfamily APS55_RS01265 IPR003477 mRNA interferase PemK-like APS55_RS01265 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APS55_RS01275 IPR000821 Alanine racemase APS55_RS01275 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal APS55_RS01275 IPR011079 Alanine racemase, C-terminal APS55_RS01275 IPR001608 Alanine racemase, N-terminal APS55_RS01275 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site APS55_RS01275 IPR029066 PLP-binding barrel APS55_RS01280 IPR001650 Helicase, C-terminal APS55_RS01280 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01280 IPR030880 DEAD-box ATP-dependent RNA helicase CshA APS55_RS01280 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS01280 IPR014014 RNA helicase, DEAD-box type, Q motif APS55_RS01280 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APS55_RS01280 IPR011545 DEAD/DEAH box helicase domain APS55_RS01285 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase APS55_RS01285 IPR035911 MurE/MurF, N-terminal APS55_RS01285 IPR000713 Mur ligase, N-terminal catalytic domain APS55_RS01285 IPR036565 Mur-like, catalytic domain superfamily APS55_RS01285 IPR004101 Mur ligase, C-terminal APS55_RS01285 IPR036615 Mur ligase, C-terminal domain superfamily APS55_RS01285 IPR013221 Mur ligase, central APS55_RS01295 IPR027493 Ribosomal protein L31 type B APS55_RS01295 IPR002150 Ribosomal protein L31 APS55_RS01295 IPR034704 L28p-like APS55_RS01295 IPR042105 Ribosomal protein L31 superfamily APS55_RS01300 IPR001986 Enolpyruvate transferase domain APS55_RS01300 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase APS55_RS01300 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APS55_RS01300 IPR036968 Enolpyruvate transferase domain superfamily APS55_RS01305 IPR029062 Class I glutamine amidotransferase-like APS55_RS01305 IPR017456 CTP synthase, N-terminal APS55_RS01305 IPR004468 CTP synthase APS55_RS01305 IPR017926 Glutamine amidotransferase APS55_RS01305 IPR033828 CTP synthase GATase domain APS55_RS01305 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01310 IPR029757 DNA-directed RNA polymerase subunit delta APS55_RS01310 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily APS55_RS01310 IPR007759 HB1/Asxl, restriction endonuclease HTH domain APS55_RS01320 IPR006674 HD domain APS55_RS01320 IPR003607 HD/PDEase domain APS55_RS01325 IPR023214 HAD superfamily APS55_RS01325 IPR000150 Cof family APS55_RS01325 IPR036412 HAD-like superfamily APS55_RS01325 IPR006379 HAD-superfamily hydrolase, subfamily IIB APS55_RS01335 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type APS55_RS01335 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site APS55_RS01335 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain APS55_RS01335 IPR000836 Phosphoribosyltransferase domain APS55_RS01335 IPR029057 Phosphoribosyltransferase-like APS55_RS01335 IPR005946 Ribose-phosphate pyrophosphokinase APS55_RS01340 IPR011004 Trimeric LpxA-like superfamily APS55_RS01340 IPR029044 Nucleotide-diphospho-sugar transferases APS55_RS01340 IPR005835 Nucleotidyl transferase domain APS55_RS01340 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase APS55_RS01340 IPR001451 Hexapeptide repeat APS55_RS01340 IPR038009 GlmU, C-terminal LbH domain APS55_RS01345 IPR010078 Pur operon repressor APS55_RS01345 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS01345 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS01345 IPR015265 Bacterial purine repressor, N-terminal APS55_RS01345 IPR000836 Phosphoribosyltransferase domain APS55_RS01345 IPR029057 Phosphoribosyltransferase-like APS55_RS01350 IPR036554 GHMP kinase, C-terminal domain superfamily APS55_RS01350 IPR013750 GHMP kinase, C-terminal domain APS55_RS01350 IPR006204 GHMP kinase N-terminal domain APS55_RS01350 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase APS55_RS01350 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS01350 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS01355 IPR009366 Protein Veg APS55_RS01370 IPR001130 TatD family APS55_RS01370 IPR018228 Deoxyribonuclease, TatD-related, conserved site APS55_RS01370 IPR032466 Metal-dependent hydrolase APS55_RS01370 IPR015991 Uncharacterised hydrolase TatD-type APS55_RS01375 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APS55_RS01375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01375 IPR012340 Nucleic acid-binding, OB-fold APS55_RS01375 IPR033911 Methioninyl-tRNA synthetase core domain APS55_RS01375 IPR015413 Methionyl/Leucyl tRNA synthetase APS55_RS01375 IPR014758 Methionyl-tRNA synthetase APS55_RS01375 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal APS55_RS01375 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APS55_RS01375 IPR002547 tRNA-binding domain APS55_RS01375 IPR023457 Methionine-tRNA synthetase, type 2 APS55_RS01375 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain APS55_RS01375 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS01380 IPR036520 UPF0759 superfamily APS55_RS01380 IPR002763 Protein of unknown function DUF72 APS55_RS01385 IPR026590 Sirtuin family, catalytic core domain APS55_RS01385 IPR028628 Sirtuin, class U APS55_RS01385 IPR026591 Sirtuin, catalytic core small domain superfamily APS55_RS01385 IPR003000 Sirtuin family APS55_RS01385 IPR029035 DHS-like NAD/FAD-binding domain superfamily APS55_RS01395 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily APS55_RS01395 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site APS55_RS01395 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type APS55_RS01395 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily APS55_RS01395 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II APS55_RS01395 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily APS55_RS01400 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase APS55_RS01400 IPR003695 Ppx/GppA phosphatase APS55_RS01400 IPR030673 Pyrophosphatase, GppA/Ppx-type APS55_RS01405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS01405 IPR002305 Aminoacyl-tRNA synthetase, class Ic APS55_RS01405 IPR024109 Tryptophan-tRNA ligase, bacterial-type APS55_RS01405 IPR002306 Tryptophan-tRNA ligase APS55_RS01405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01410 IPR027785 UvrD-like helicase C-terminal domain APS55_RS01410 IPR014016 UvrD-like helicase, ATP-binding domain APS55_RS01410 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01410 IPR000212 DNA helicase, UvrD/REP type APS55_RS01415 IPR024953 Polyphosphate kinase middle domain APS55_RS01415 IPR036832 Polyphosphate kinase N-terminal domain superfamily APS55_RS01415 IPR025198 Polyphosphate kinase N-terminal domain APS55_RS01415 IPR003414 Polyphosphate kinase APS55_RS01415 IPR025200 Polyphosphate kinase C-terminal domain 2 APS55_RS01415 IPR041108 Polyphosphate kinase, C-terminal domain 1 APS55_RS01415 IPR036830 Polyphosphate kinase middle domain superfamily APS55_RS01445 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 APS55_RS01445 IPR036986 RNA-binding S4 domain superfamily APS55_RS01445 IPR002307 Tyrosine-tRNA ligase APS55_RS01445 IPR002942 RNA-binding S4 domain APS55_RS01445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS01445 IPR002305 Aminoacyl-tRNA synthetase, class Ic APS55_RS01445 IPR024088 Tyrosine-tRNA ligase, bacterial-type APS55_RS01445 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS01455 IPR011701 Major facilitator superfamily APS55_RS01455 IPR036259 MFS transporter superfamily APS55_RS01455 IPR004638 Drug resistance transporter EmrB-like APS55_RS01455 IPR020846 Major facilitator superfamily domain APS55_RS01465 IPR029044 Nucleotide-diphospho-sugar transferases APS55_RS01465 IPR001173 Glycosyltransferase 2-like APS55_RS01465 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA APS55_RS01480 IPR029033 Histidine phosphatase superfamily APS55_RS01480 IPR005952 Phosphoglycerate mutase 1 APS55_RS01480 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site APS55_RS01480 IPR013078 Histidine phosphatase superfamily, clade-1 APS55_RS01485 IPR002549 Transmembrane protein TqsA-like APS55_RS01490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS01490 IPR003333 Mycolic acid cyclopropane synthase APS55_RS01515 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APS55_RS01515 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily APS55_RS01515 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APS55_RS01515 IPR015956 Penicillin-binding protein, C-terminal domain superfamily APS55_RS01515 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS01515 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal APS55_RS01520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS01520 IPR005467 Histidine kinase domain APS55_RS01520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APS55_RS01520 IPR003594 Histidine kinase/HSP90-like ATPase APS55_RS01520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APS55_RS01520 IPR000014 PAS domain APS55_RS01520 IPR035965 PAS domain superfamily APS55_RS01520 IPR013767 PAS fold APS55_RS01520 IPR031967 PhoR, single Cache-like domain APS55_RS01520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APS55_RS01525 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS01525 IPR039420 Transcriptional regulatory protein WalR-like APS55_RS01525 IPR001789 Signal transduction response regulator, receiver domain APS55_RS01525 IPR016032 Signal transduction response regulator, C-terminal effector APS55_RS01525 IPR001867 OmpR/PhoB-type DNA-binding domain APS55_RS01525 IPR011006 CheY-like superfamily APS55_RS01530 IPR015875 IMP dehydrogenase / GMP reductase, conserved site APS55_RS01530 IPR001093 IMP dehydrogenase/GMP reductase APS55_RS01530 IPR013785 Aldolase-type TIM barrel APS55_RS01530 IPR000644 CBS domain APS55_RS01530 IPR005990 Inosine-5'-monophosphate dehydrogenase APS55_RS01540 IPR004095 TGS APS55_RS01540 IPR006073 GTP binding domain APS55_RS01540 IPR041706 YchF, N-terminal APS55_RS01540 IPR013029 YchF, C-terminal domain APS55_RS01540 IPR023192 TGS-like domain superfamily APS55_RS01540 IPR031167 OBG-type guanine nucleotide-binding (G) domain APS55_RS01540 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 APS55_RS01540 IPR012675 Beta-grasp domain superfamily APS55_RS01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01540 IPR012676 TGS-like APS55_RS01545 IPR009296 Protein of unknown function DUF951 APS55_RS01550 IPR041468 ParB/Spo0J, HTH domain APS55_RS01550 IPR004437 ParB/RepB/Spo0J partition protein APS55_RS01550 IPR003115 ParB/Sulfiredoxin APS55_RS01550 IPR036086 ParB/Sulfiredoxin superfamily APS55_RS01555 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01555 IPR025669 AAA domain APS55_RS01560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS01560 IPR003682 rRNA small subunit methyltransferase G APS55_RS01565 IPR006043 Xanthine/uracil/vitamin C permease APS55_RS01570 IPR008276 Concentrative nucleoside transporter APS55_RS01570 IPR011657 Concentrative nucleoside transporter C-terminal domain APS55_RS01570 IPR002668 Concentrative nucleoside transporter N-terminal domain APS55_RS01570 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial APS55_RS01575 IPR006124 Metalloenzyme APS55_RS01575 IPR010045 Phosphopentomutase APS55_RS01575 IPR017850 Alkaline-phosphatase-like, core domain superfamily APS55_RS01575 IPR024052 Phosphopentomutase DeoB cap domain superfamily APS55_RS01605 IPR001584 Integrase, catalytic core APS55_RS01605 IPR038965 Transposase InsF-like APS55_RS01605 IPR012337 Ribonuclease H-like superfamily APS55_RS01605 IPR025948 HTH-like domain APS55_RS01605 IPR036397 Ribonuclease H superfamily APS55_RS01630 IPR000847 Transcription regulator HTH, LysR APS55_RS01630 IPR005119 LysR, substrate-binding APS55_RS01630 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS01630 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS01650 IPR016181 Acyl-CoA N-acyltransferase APS55_RS01650 IPR000182 GNAT domain APS55_RS01665 IPR012340 Nucleic acid-binding, OB-fold APS55_RS01665 IPR030390 RNA methyltransferase TrmA, active site APS55_RS01665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS01665 IPR002792 TRAM domain APS55_RS01665 IPR010280 (Uracil-5)-methyltransferase family APS55_RS01680 IPR014267 Glycosyltransferase Gtf1 APS55_RS01680 IPR001296 Glycosyl transferase, family 1 APS55_RS01685 IPR001296 Glycosyl transferase, family 1 APS55_RS01685 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS55_RS01685 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA APS55_RS01715 IPR029021 Protein-tyrosine phosphatase-like APS55_RS01715 IPR026893 Tyrosine/serine-protein phosphatase IphP-type APS55_RS01715 IPR016130 Protein-tyrosine phosphatase, active site APS55_RS01715 IPR000387 Tyrosine specific protein phosphatases domain APS55_RS01730 IPR036397 Ribonuclease H superfamily APS55_RS01730 IPR012337 Ribonuclease H-like superfamily APS55_RS01730 IPR038965 Transposase InsF-like APS55_RS01730 IPR001584 Integrase, catalytic core APS55_RS01745 IPR022761 Fumarate lyase, N-terminal APS55_RS01745 IPR000362 Fumarate lyase family APS55_RS01745 IPR004769 Adenylosuccinate lyase APS55_RS01745 IPR024083 Fumarase/histidase, N-terminal APS55_RS01745 IPR019468 Adenylosuccinate lyase C-terminal APS55_RS01745 IPR020557 Fumarate lyase, conserved site APS55_RS01745 IPR008948 L-Aspartase-like APS55_RS01750 IPR033128 Adenylosuccinate synthase, active site APS55_RS01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS01750 IPR001114 Adenylosuccinate synthetase APS55_RS01750 IPR018220 Adenylosuccinate synthase, GTP-binding site APS55_RS01750 IPR042109 Adenylosuccinate synthetase, domain 1 APS55_RS01750 IPR042110 Adenylosuccinate synthetase, domain 2 APS55_RS01750 IPR042111 Adenylosuccinate synthetase, domain 3 APS55_RS01755 IPR001093 IMP dehydrogenase/GMP reductase APS55_RS01755 IPR013785 Aldolase-type TIM barrel APS55_RS01755 IPR005994 Guanosine monophosphate reductase, type2 APS55_RS01755 IPR015875 IMP dehydrogenase / GMP reductase, conserved site APS55_RS01760 IPR042007 Sortase A APS55_RS01760 IPR005754 Sortase family APS55_RS01760 IPR023365 Sortase domain superfamily APS55_RS01765 IPR001295 Dihydroorotate dehydrogenase, conserved site APS55_RS01765 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 APS55_RS01765 IPR033886 Dihydroorotate dehydrogenase, class 1A APS55_RS01765 IPR013785 Aldolase-type TIM barrel APS55_RS01765 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 APS55_RS01765 IPR024920 Dihydroorotate dehydrogenase, class 1 APS55_RS01765 IPR005720 Dihydroorotate dehydrogenase domain APS55_RS01770 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APS55_RS01770 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS01770 IPR036914 Methylglyoxal synthase-like domain superfamily APS55_RS01770 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain APS55_RS01770 IPR011761 ATP-grasp fold APS55_RS01770 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily APS55_RS01770 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain APS55_RS01770 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain APS55_RS01770 IPR006275 Carbamoyl-phosphate synthase, large subunit APS55_RS01770 IPR011607 Methylglyoxal synthase-like domain APS55_RS01775 IPR017926 Glutamine amidotransferase APS55_RS01775 IPR029062 Class I glutamine amidotransferase-like APS55_RS01775 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain APS55_RS01775 IPR006274 Carbamoyl-phosphate synthase, small subunit APS55_RS01775 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain APS55_RS01775 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily APS55_RS01780 IPR011059 Metal-dependent hydrolase, composite domain superfamily APS55_RS01780 IPR002195 Dihydroorotase, conserved site APS55_RS01780 IPR032466 Metal-dependent hydrolase APS55_RS01780 IPR004722 Dihydroorotase APS55_RS01780 IPR006680 Amidohydrolase-related APS55_RS01785 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APS55_RS01785 IPR002082 Aspartate carbamoyltransferase APS55_RS01785 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APS55_RS01785 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APS55_RS01785 IPR006130 Aspartate/ornithine carbamoyltransferase APS55_RS01790 IPR010611 3D domain APS55_RS01790 IPR018392 LysM domain APS55_RS01790 IPR036779 LysM domain superfamily APS55_RS01790 IPR036908 RlpA-like domain superfamily APS55_RS01800 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal APS55_RS01800 IPR004770 Na+/H+ antiporter NhaC APS55_RS01805 IPR005746 Thioredoxin APS55_RS01805 IPR036249 Thioredoxin-like superfamily APS55_RS01805 IPR017937 Thioredoxin, conserved site APS55_RS01805 IPR013766 Thioredoxin domain APS55_RS01810 IPR005496 Integral membrane protein TerC APS55_RS01810 IPR022493 Integral membrane YkoY APS55_RS01815 IPR025987 GW domain APS55_RS01815 IPR038200 GW domain superfamily APS55_RS01815 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain APS55_RS01825 IPR036779 LysM domain superfamily APS55_RS01825 IPR000064 Endopeptidase, NLPC/P60 domain APS55_RS01825 IPR003646 SH3-like domain, bacterial-type APS55_RS01825 IPR018392 LysM domain APS55_RS01825 IPR038765 Papain-like cysteine peptidase superfamily APS55_RS01830 IPR023086 Phosphoglycerate mutase, GpmB, probable APS55_RS01830 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site APS55_RS01830 IPR029033 Histidine phosphatase superfamily APS55_RS01830 IPR013078 Histidine phosphatase superfamily, clade-1 APS55_RS01840 IPR017850 Alkaline-phosphatase-like, core domain superfamily APS55_RS01840 IPR000917 Sulfatase, N-terminal APS55_RS01840 IPR012160 Lipoteichoic acid synthase-like APS55_RS01850 IPR022890 Ferredoxin--NADP reductase, type 2 APS55_RS01850 IPR023753 FAD/NAD(P)-binding domain APS55_RS01850 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS01860 IPR036452 Ribonucleoside hydrolase-like APS55_RS01860 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB APS55_RS01860 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APS55_RS01860 IPR023186 Inosine/uridine-preferring nucleoside hydrolase APS55_RS01865 IPR036412 HAD-like superfamily APS55_RS01865 IPR000150 Cof family APS55_RS01865 IPR006379 HAD-superfamily hydrolase, subfamily IIB APS55_RS01865 IPR023214 HAD superfamily APS55_RS01870 IPR006660 Arsenate reductase-like APS55_RS01870 IPR006504 Transcriptional regulator Spx/MgsR APS55_RS01870 IPR023731 Regulatory protein Spx APS55_RS01870 IPR036249 Thioredoxin-like superfamily APS55_RS01875 IPR006146 5'-Nucleotidase, conserved site APS55_RS01875 IPR008334 5'-Nucleotidase, C-terminal APS55_RS01875 IPR036907 5'-Nucleotidase, C-terminal domain superfamily APS55_RS01875 IPR029052 Metallo-dependent phosphatase-like APS55_RS01875 IPR019931 LPXTG cell wall anchor domain APS55_RS01875 IPR041827 CpdB, N-terminal metallophosphatase domain APS55_RS01875 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APS55_RS01875 IPR006179 5'-Nucleotidase/apyrase APS55_RS01880 IPR036612 K Homology domain, type 1 superfamily APS55_RS01880 IPR006675 HDIG domain APS55_RS01880 IPR006674 HD domain APS55_RS01880 IPR003607 HD/PDEase domain APS55_RS01880 IPR017705 Ribonuclease Y APS55_RS01880 IPR022711 Ribonuclease Y, N-terminal APS55_RS01880 IPR004087 K Homology domain APS55_RS01880 IPR004088 K Homology domain, type 1 APS55_RS01895 IPR001905 Ammonium transporter APS55_RS01895 IPR018047 Ammonium transporter, conserved site APS55_RS01895 IPR029020 Ammonium/urea transporter APS55_RS01895 IPR024041 Ammonium transporter AmtB-like domain APS55_RS01915 IPR006225 Pseudouridine synthase, RluC/RluD APS55_RS01915 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS01915 IPR006145 Pseudouridine synthase, RsuA/RluA APS55_RS01915 IPR002942 RNA-binding S4 domain APS55_RS01915 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site APS55_RS01915 IPR036986 RNA-binding S4 domain superfamily APS55_RS01920 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal APS55_RS01920 IPR023962 Probable phosphoketolase APS55_RS01920 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site APS55_RS01920 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal APS55_RS01920 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase APS55_RS01920 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site APS55_RS01920 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II APS55_RS01920 IPR029061 Thiamin diphosphate-binding fold APS55_RS01925 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APS55_RS01925 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS01925 IPR000524 Transcription regulator HTH, GntR APS55_RS01925 IPR011663 UbiC transcription regulator-associated APS55_RS01925 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS01940 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APS55_RS01940 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily APS55_RS01940 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APS55_RS01945 IPR006674 HD domain APS55_RS01945 IPR003607 HD/PDEase domain APS55_RS01955 IPR023214 HAD superfamily APS55_RS01955 IPR036412 HAD-like superfamily APS55_RS01955 IPR008250 P-type ATPase, A domain superfamily APS55_RS01955 IPR018303 P-type ATPase, phosphorylation site APS55_RS01955 IPR023299 P-type ATPase, cytoplasmic domain N APS55_RS01955 IPR001757 P-type ATPase APS55_RS01955 IPR023298 P-type ATPase, transmembrane domain superfamily APS55_RS01960 IPR023210 NADP-dependent oxidoreductase domain APS55_RS01960 IPR018170 Aldo/keto reductase, conserved site APS55_RS01960 IPR020471 Aldo/keto reductase APS55_RS01960 IPR036812 NADP-dependent oxidoreductase domain superfamily APS55_RS01970 IPR039429 Serine hydroxymethyltransferase-like domain APS55_RS01970 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS01970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS01970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS01970 IPR001085 Serine hydroxymethyltransferase APS55_RS01970 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site APS55_RS01985 IPR003784 BioY protein APS55_RS01995 IPR012788 4-carboxymuconolactone decarboxylase APS55_RS01995 IPR003779 Carboxymuconolactone decarboxylase-like APS55_RS01995 IPR029032 AhpD-like APS55_RS02005 IPR000551 MerR-type HTH domain APS55_RS02005 IPR009061 Putative DNA-binding domain superfamily APS55_RS02015 IPR013196 Helix-turn-helix, type 11 APS55_RS02015 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain APS55_RS02015 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS02015 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS02015 IPR004408 Biotin--acetyl-CoA-carboxylase ligase APS55_RS02015 IPR004409 Biotin operon repressor, helix-turn-helix domain APS55_RS02015 IPR003142 Biotin protein ligase, C-terminal APS55_RS02015 IPR008988 Transcriptional repressor, C-terminal APS55_RS02015 IPR030855 Bifunctional ligase/repressor BirA APS55_RS02025 IPR000551 MerR-type HTH domain APS55_RS02025 IPR009061 Putative DNA-binding domain superfamily APS55_RS02030 IPR018170 Aldo/keto reductase, conserved site APS55_RS02030 IPR020471 Aldo/keto reductase APS55_RS02030 IPR023210 NADP-dependent oxidoreductase domain APS55_RS02030 IPR036812 NADP-dependent oxidoreductase domain superfamily APS55_RS02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02040 IPR017871 ABC transporter, conserved site APS55_RS02040 IPR003439 ABC transporter-like APS55_RS02040 IPR003593 AAA+ ATPase domain APS55_RS02070 IPR002293 Amino acid/polyamine transporter I APS55_RS02075 IPR027399 Alcohol dehydrogenase GroES-associated APS55_RS02075 IPR013154 Alcohol dehydrogenase, N-terminal APS55_RS02075 IPR036291 NAD(P)-binding domain superfamily APS55_RS02075 IPR011032 GroES-like superfamily APS55_RS02075 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APS55_RS02075 IPR013149 Alcohol dehydrogenase, C-terminal APS55_RS02080 IPR001584 Integrase, catalytic core APS55_RS02080 IPR012337 Ribonuclease H-like superfamily APS55_RS02080 IPR038965 Transposase InsF-like APS55_RS02080 IPR025948 HTH-like domain APS55_RS02080 IPR036397 Ribonuclease H superfamily APS55_RS02120 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS02120 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS02120 IPR005149 Transcription regulator PadR, N-terminal APS55_RS02125 IPR006232 Sucrose-6-phosphate hydrolase APS55_RS02125 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily APS55_RS02125 IPR013148 Glycosyl hydrolase family 32, N-terminal APS55_RS02125 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily APS55_RS02125 IPR001362 Glycoside hydrolase, family 32 APS55_RS02125 IPR018053 Glycoside hydrolase, family 32, active site APS55_RS02125 IPR013189 Glycosyl hydrolase family 32, C-terminal APS55_RS02130 IPR000600 ROK family APS55_RS02135 IPR035482 Phosphoglucose isomerase, SIS domain 2 APS55_RS02135 IPR035476 Phosphoglucose isomerase, SIS domain 1 APS55_RS02135 IPR001672 Phosphoglucose isomerase (PGI) APS55_RS02135 IPR018189 Phosphoglucose isomerase, conserved site APS55_RS02140 IPR000600 ROK family APS55_RS02160 IPR009061 Putative DNA-binding domain superfamily APS55_RS02160 IPR000551 MerR-type HTH domain APS55_RS02170 IPR000182 GNAT domain APS55_RS02170 IPR016181 Acyl-CoA N-acyltransferase APS55_RS02200 IPR038965 Transposase InsF-like APS55_RS02200 IPR001584 Integrase, catalytic core APS55_RS02200 IPR012337 Ribonuclease H-like superfamily APS55_RS02200 IPR036397 Ribonuclease H superfamily APS55_RS02265 IPR008978 HSP20-like chaperone APS55_RS02265 IPR031107 Small heat shock protein HSP20 APS55_RS02265 IPR002068 Alpha crystallin/Hsp20 domain APS55_RS02270 IPR031107 Small heat shock protein HSP20 APS55_RS02270 IPR002068 Alpha crystallin/Hsp20 domain APS55_RS02270 IPR008978 HSP20-like chaperone APS55_RS02280 IPR005467 Histidine kinase domain APS55_RS02280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS02280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APS55_RS02280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APS55_RS02280 IPR003594 Histidine kinase/HSP90-like ATPase APS55_RS02280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APS55_RS02285 IPR001867 OmpR/PhoB-type DNA-binding domain APS55_RS02285 IPR011006 CheY-like superfamily APS55_RS02285 IPR039420 Transcriptional regulatory protein WalR-like APS55_RS02285 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS02285 IPR001789 Signal transduction response regulator, receiver domain APS55_RS02295 IPR038731 Glycosyltransferase RgtA/B/C/D-like APS55_RS02300 IPR029044 Nucleotide-diphospho-sugar transferases APS55_RS02300 IPR001173 Glycosyltransferase 2-like APS55_RS02320 IPR000644 CBS domain APS55_RS02320 IPR002550 CNNM, transmembrane domain APS55_RS02320 IPR036318 FAD-binding, type PCMH-like superfamily APS55_RS02320 IPR016169 FAD-binding, type PCMH, subdomain 2 APS55_RS02320 IPR005170 Transporter-associated domain APS55_RS02325 IPR004465 Ribonucleotide reductase Class Ib, NrdI APS55_RS02325 IPR029039 Flavoprotein-like superfamily APS55_RS02330 IPR011701 Major facilitator superfamily APS55_RS02330 IPR020846 Major facilitator superfamily domain APS55_RS02330 IPR036259 MFS transporter superfamily APS55_RS02335 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding APS55_RS02335 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal APS55_RS02335 IPR036291 NAD(P)-binding domain superfamily APS55_RS02335 IPR019796 Glucose-6-phosphate dehydrogenase, active site APS55_RS02335 IPR001282 Glucose-6-phosphate dehydrogenase APS55_RS02340 IPR006184 6-phosphogluconate-binding site APS55_RS02340 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating APS55_RS02340 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APS55_RS02340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APS55_RS02340 IPR036291 NAD(P)-binding domain superfamily APS55_RS02340 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APS55_RS02340 IPR006114 6-phosphogluconate dehydrogenase, C-terminal APS55_RS02340 IPR006183 6-phosphogluconate dehydrogenase APS55_RS02345 IPR033138 Multicopper oxidases, conserved site APS55_RS02345 IPR011707 Multicopper oxidase, type 3 APS55_RS02345 IPR011706 Multicopper oxidase, type 2 APS55_RS02345 IPR008972 Cupredoxin APS55_RS02345 IPR002355 Multicopper oxidase, copper-binding site APS55_RS02350 IPR006130 Aspartate/ornithine carbamoyltransferase APS55_RS02350 IPR024904 Ornithine carbamoyltransferase APS55_RS02350 IPR002292 Ornithine/putrescine carbamoyltransferase APS55_RS02350 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain APS55_RS02350 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding APS55_RS02350 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily APS55_RS02355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS02355 IPR005814 Aminotransferase class-III APS55_RS02355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS02355 IPR004636 Acetylornithine/Succinylornithine transaminase family APS55_RS02355 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS02360 IPR001048 Aspartate/glutamate/uridylate kinase APS55_RS02360 IPR004662 Acetylglutamate kinase family APS55_RS02360 IPR036393 Acetylglutamate kinase-like superfamily APS55_RS02360 IPR037528 Acetylglutamate kinase ArgB APS55_RS02375 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain APS55_RS02375 IPR006274 Carbamoyl-phosphate synthase, small subunit APS55_RS02375 IPR017926 Glutamine amidotransferase APS55_RS02375 IPR029062 Class I glutamine amidotransferase-like APS55_RS02375 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain APS55_RS02375 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily APS55_RS02380 IPR011761 ATP-grasp fold APS55_RS02380 IPR006275 Carbamoyl-phosphate synthase, large subunit APS55_RS02380 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain APS55_RS02380 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain APS55_RS02380 IPR036914 Methylglyoxal synthase-like domain superfamily APS55_RS02380 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily APS55_RS02380 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APS55_RS02380 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain APS55_RS02380 IPR011607 Methylglyoxal synthase-like domain APS55_RS02380 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS02385 IPR036458 Sodium:dicarboxylate symporter superfamily APS55_RS02385 IPR018107 Sodium:dicarboxylate symporter, conserved site APS55_RS02385 IPR001991 Sodium:dicarboxylate symporter APS55_RS02385 IPR033380 Glutamate-aspartate symport protein GltP/GltT APS55_RS02405 IPR020616 Thiolase, N-terminal APS55_RS02405 IPR020613 Thiolase, conserved site APS55_RS02405 IPR020617 Thiolase, C-terminal APS55_RS02405 IPR020615 Thiolase, acyl-enzyme intermediate active site APS55_RS02405 IPR002155 Thiolase APS55_RS02405 IPR016039 Thiolase-like APS55_RS02420 IPR038063 L,D-transpeptidase catalytic domain-like APS55_RS02420 IPR005490 L,D-transpeptidase catalytic domain APS55_RS02435 IPR016084 Haem oxygenase-like, multi-helical APS55_RS02435 IPR027574 Thiaminase II APS55_RS02435 IPR004305 Thiaminase-2/PQQC APS55_RS02440 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APS55_RS02440 IPR029056 Ribokinase-like APS55_RS02440 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APS55_RS02445 IPR013785 Aldolase-type TIM barrel APS55_RS02445 IPR036206 Thiamin phosphate synthase superfamily APS55_RS02445 IPR034291 Thiamine phosphate synthase APS55_RS02445 IPR022998 Thiamine phosphate synthase/TenI APS55_RS02450 IPR029056 Ribokinase-like APS55_RS02450 IPR000417 Hydroxyethylthiazole kinase APS55_RS02460 IPR010976 Beta-phosphoglucomutase hydrolase APS55_RS02460 IPR010972 Beta-phosphoglucomutase APS55_RS02460 IPR036412 HAD-like superfamily APS55_RS02460 IPR041492 Haloacid dehalogenase-like hydrolase APS55_RS02460 IPR023214 HAD superfamily APS55_RS02460 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APS55_RS02460 IPR006439 HAD hydrolase, subfamily IA APS55_RS02465 IPR008928 Six-hairpin glycosidase superfamily APS55_RS02465 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase APS55_RS02465 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily APS55_RS02465 IPR005196 Glycoside hydrolase, family 65, N-terminal APS55_RS02465 IPR005195 Glycoside hydrolase, family 65, central catalytic APS55_RS02465 IPR005194 Glycoside hydrolase family 65, C-terminal APS55_RS02465 IPR011013 Galactose mutarotase-like domain superfamily APS55_RS02465 IPR012341 Six-hairpin glycosidase-like superfamily APS55_RS02470 IPR001927 Sodium:galactoside symporter APS55_RS02470 IPR018043 Sodium:galactoside symporter, conserved site APS55_RS02470 IPR036259 MFS transporter superfamily APS55_RS02470 IPR039672 Lactose permease-like APS55_RS02480 IPR002347 Short-chain dehydrogenase/reductase SDR APS55_RS02480 IPR020904 Short-chain dehydrogenase/reductase, conserved site APS55_RS02480 IPR014007 Acetoin reductase APS55_RS02480 IPR036291 NAD(P)-binding domain superfamily APS55_RS02485 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS02485 IPR023753 FAD/NAD(P)-binding domain APS55_RS02485 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APS55_RS02485 IPR006322 Glutathione reductase, eukaryote/bacterial APS55_RS02485 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APS55_RS02485 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS02485 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APS55_RS02490 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS02490 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site APS55_RS02490 IPR023753 FAD/NAD(P)-binding domain APS55_RS02490 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I APS55_RS02490 IPR006322 Glutathione reductase, eukaryote/bacterial APS55_RS02490 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APS55_RS02490 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS02500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS02500 IPR006015 Universal stress protein A family APS55_RS02500 IPR006016 UspA APS55_RS02505 IPR001046 NRAMP family APS55_RS02510 IPR032466 Metal-dependent hydrolase APS55_RS02510 IPR011059 Metal-dependent hydrolase, composite domain superfamily APS55_RS02510 IPR006679 Adenine deaminase APS55_RS02510 IPR006680 Amidohydrolase-related APS55_RS02510 IPR026912 Adenine deaminase C-terminal domain APS55_RS02535 IPR001478 PDZ domain APS55_RS02535 IPR036034 PDZ superfamily APS55_RS02535 IPR001940 Peptidase S1C APS55_RS02535 IPR009003 Peptidase S1, PA clan APS55_RS02540 IPR001279 Metallo-beta-lactamase APS55_RS02540 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APS55_RS02555 IPR029150 Double Cache domain 3 APS55_RS02555 IPR003660 HAMP domain APS55_RS02555 IPR003594 Histidine kinase/HSP90-like ATPase APS55_RS02555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS02555 IPR005467 Histidine kinase domain APS55_RS02555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APS55_RS02555 IPR000014 PAS domain APS55_RS02555 IPR000700 PAS-associated, C-terminal APS55_RS02555 IPR029151 Periplasmic sensor-like domain superfamily APS55_RS02555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APS55_RS02555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APS55_RS02555 IPR035965 PAS domain superfamily APS55_RS02560 IPR001789 Signal transduction response regulator, receiver domain APS55_RS02560 IPR016032 Signal transduction response regulator, C-terminal effector APS55_RS02560 IPR001867 OmpR/PhoB-type DNA-binding domain APS55_RS02560 IPR039420 Transcriptional regulatory protein WalR-like APS55_RS02560 IPR011006 CheY-like superfamily APS55_RS02560 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS02575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS02575 IPR001091 Restriction/modification DNA-methylase APS55_RS02575 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APS55_RS02575 IPR002941 DNA methylase N-4/N-6 APS55_RS02575 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class APS55_RS02585 IPR038770 Sodium/solute symporter superfamily APS55_RS02585 IPR004771 K+/H+ exchanger APS55_RS02585 IPR006153 Cation/H+ exchanger APS55_RS02605 IPR038770 Sodium/solute symporter superfamily APS55_RS02605 IPR004771 K+/H+ exchanger APS55_RS02605 IPR006153 Cation/H+ exchanger APS55_RS02615 IPR005144 ATP-cone domain APS55_RS02615 IPR001150 Glycine radical domain APS55_RS02615 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APS55_RS02615 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic APS55_RS02620 IPR001989 Radical-activating enzyme, conserved site APS55_RS02620 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic APS55_RS02620 IPR034457 Organic radical-activating enzymes APS55_RS02620 IPR013785 Aldolase-type TIM barrel APS55_RS02625 IPR003593 AAA+ ATPase domain APS55_RS02625 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02625 IPR010230 FeS cluster assembly SUF system, ATPase SufC APS55_RS02625 IPR017871 ABC transporter, conserved site APS55_RS02625 IPR003439 ABC transporter-like APS55_RS02630 IPR011542 SUF system FeS cluster assembly, SufD APS55_RS02630 IPR000825 SUF system FeS cluster assembly, SufBD APS55_RS02630 IPR037284 SUF system FeS cluster assembly, SufBD superfamily APS55_RS02635 IPR000192 Aminotransferase class V domain APS55_RS02635 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APS55_RS02635 IPR016454 Cysteine desulfurase APS55_RS02635 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS02635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS02635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS02635 IPR010970 Cysteine desulfurase, SufS APS55_RS02645 IPR037284 SUF system FeS cluster assembly, SufBD superfamily APS55_RS02645 IPR010231 SUF system FeS cluster assembly, SufB APS55_RS02645 IPR000825 SUF system FeS cluster assembly, SufBD APS55_RS02650 IPR020557 Fumarate lyase, conserved site APS55_RS02650 IPR008948 L-Aspartase-like APS55_RS02650 IPR024083 Fumarase/histidase, N-terminal APS55_RS02650 IPR022761 Fumarate lyase, N-terminal APS55_RS02650 IPR004708 Aspartate ammonia-lyase APS55_RS02650 IPR000362 Fumarate lyase family APS55_RS02650 IPR018951 Fumarase C, C-terminal APS55_RS02660 IPR016181 Acyl-CoA N-acyltransferase APS55_RS02660 IPR000182 GNAT domain APS55_RS02665 IPR023187 Transcriptional regulator MarR-type, conserved site APS55_RS02665 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS02665 IPR000835 MarR-type HTH domain APS55_RS02665 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS02670 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APS55_RS02670 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APS55_RS02670 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APS55_RS02670 IPR036291 NAD(P)-binding domain superfamily APS55_RS02670 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS55_RS02675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS02675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS02675 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS02675 IPR004839 Aminotransferase, class I/classII APS55_RS02675 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APS55_RS02680 IPR030678 Peptide/nickel binding protein, MppA-type APS55_RS02680 IPR000914 Solute-binding protein family 5 domain APS55_RS02680 IPR039424 Solute-binding protein family 5 APS55_RS02680 IPR023765 Solute-binding protein family 5, conserved site APS55_RS02685 IPR004722 Dihydroorotase APS55_RS02685 IPR006680 Amidohydrolase-related APS55_RS02685 IPR011059 Metal-dependent hydrolase, composite domain superfamily APS55_RS02685 IPR032466 Metal-dependent hydrolase APS55_RS02685 IPR002195 Dihydroorotase, conserved site APS55_RS02695 IPR007692 DNA helicase, DnaB type APS55_RS02695 IPR007694 DNA helicase, DnaB-like, C-terminal APS55_RS02695 IPR007693 DNA helicase, DnaB-like, N-terminal APS55_RS02695 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APS55_RS02695 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02695 IPR003593 AAA+ ATPase domain APS55_RS02695 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily APS55_RS02700 IPR036935 Ribosomal protein L9, N-terminal domain superfamily APS55_RS02700 IPR000244 Ribosomal protein L9 APS55_RS02700 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APS55_RS02700 IPR020594 Ribosomal protein L9, bacteria/chloroplast APS55_RS02700 IPR020070 Ribosomal protein L9, N-terminal APS55_RS02700 IPR036791 Ribosomal protein L9, C-terminal domain superfamily APS55_RS02700 IPR020069 Ribosomal protein L9, C-terminal APS55_RS02705 IPR038763 DHH phosphoesterase superfamily APS55_RS02705 IPR001667 DDH domain APS55_RS02705 IPR000160 GGDEF domain APS55_RS02705 IPR003156 DHHA1 domain APS55_RS02705 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA APS55_RS02710 IPR001648 Ribosomal protein S18 APS55_RS02710 IPR018275 Ribosomal protein S18, conserved site APS55_RS02710 IPR036870 Ribosomal protein S18 superfamily APS55_RS02715 IPR011344 Single-stranded DNA-binding protein APS55_RS02715 IPR012340 Nucleic acid-binding, OB-fold APS55_RS02715 IPR000424 Primosome PriB/single-strand DNA-binding APS55_RS02720 IPR000529 Ribosomal protein S6 APS55_RS02720 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APS55_RS02720 IPR020814 Ribosomal protein S6, plastid/chloroplast APS55_RS02720 IPR035980 Ribosomal protein S6 superfamily APS55_RS02735 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat APS55_RS02735 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily APS55_RS02735 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal APS55_RS02735 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta APS55_RS02735 IPR005743 DNA gyrase, subunit A APS55_RS02735 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APS55_RS02735 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APS55_RS02740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS02740 IPR003594 Histidine kinase/HSP90-like ATPase APS55_RS02740 IPR034160 DNA gyrase subunit B, TOPRIM domain APS55_RS02740 IPR006171 TOPRIM domain APS55_RS02740 IPR018522 DNA topoisomerase, type IIA, conserved site APS55_RS02740 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 APS55_RS02740 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal APS55_RS02740 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APS55_RS02740 IPR001241 DNA topoisomerase, type IIA APS55_RS02740 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS02740 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS02740 IPR011557 DNA gyrase, subunit B APS55_RS02740 IPR002288 DNA gyrase B subunit, C-terminal APS55_RS02745 IPR018078 DNA-binding, RecF, conserved site APS55_RS02745 IPR003395 RecF/RecN/SMC, N-terminal APS55_RS02745 IPR042174 DNA-binding RecF, domain 2 APS55_RS02745 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02745 IPR001238 DNA-binding, RecF APS55_RS02750 IPR014330 RNA-binding S4-related,YaaA APS55_RS02750 IPR036986 RNA-binding S4 domain superfamily APS55_RS02750 IPR002942 RNA-binding S4 domain APS55_RS02755 IPR036005 Creatinase/aminopeptidase-like APS55_RS02755 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APS55_RS02755 IPR000587 Creatinase, N-terminal APS55_RS02755 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APS55_RS02755 IPR000994 Peptidase M24 APS55_RS02760 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal APS55_RS02760 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal APS55_RS02760 IPR001001 DNA polymerase III, beta sliding clamp APS55_RS02760 IPR022637 DNA polymerase III, beta sliding clamp, central APS55_RS02765 IPR003593 AAA+ ATPase domain APS55_RS02765 IPR020591 Chromosomal replication control, initiator DnaA-like APS55_RS02765 IPR010921 Trp repressor/replication initiator APS55_RS02765 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02765 IPR038454 DnaA, N-terminal domain superfamily APS55_RS02765 IPR001957 Chromosomal replication control, initiator DnaA APS55_RS02765 IPR024633 DnaA N-terminal domain APS55_RS02765 IPR013159 Chromosomal replication initiator, DnaA C-terminal APS55_RS02765 IPR013317 Chromosomal replication initiator protein DnaA APS55_RS02765 IPR018312 Chromosomal replication control, initiator DnaA, conserved site APS55_RS02770 IPR020939 Ribosomal protein L34, conserved site APS55_RS02770 IPR000271 Ribosomal protein L34 APS55_RS02775 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS02775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS02775 IPR000100 Ribonuclease P APS55_RS02780 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APS55_RS02780 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 APS55_RS02780 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes APS55_RS02785 IPR034079 Jag, R3H domain APS55_RS02785 IPR036867 R3H domain superfamily APS55_RS02785 IPR015946 K homology domain-like, alpha/beta APS55_RS02785 IPR004087 K Homology domain APS55_RS02785 IPR038247 Jag, N-terminal domain superfamily APS55_RS02785 IPR032782 Jag, N-terminal APS55_RS02785 IPR001374 R3H domain APS55_RS02785 IPR038008 Jag, KH domain APS55_RS02785 IPR039247 Jag protein APS55_RS02790 IPR004520 tRNA modification GTPase MnmE APS55_RS02790 IPR018948 GTP-binding protein TrmE, N-terminal APS55_RS02790 IPR006073 GTP binding domain APS55_RS02790 IPR027368 tRNA modification GTPase MnmE domain 2 APS55_RS02790 IPR025867 MnmE, helical domain APS55_RS02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02790 IPR031168 TrmE-type guanine nucleotide-binding domain APS55_RS02790 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 APS55_RS02790 IPR005225 Small GTP-binding protein domain APS55_RS02795 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS02795 IPR026904 GidA associated domain 3 APS55_RS02795 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG APS55_RS02795 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related APS55_RS02795 IPR020595 MnmG-related, conserved site APS55_RS02805 IPR036286 LexA/Signal peptidase-like superfamily APS55_RS02805 IPR019533 Peptidase S26 APS55_RS02805 IPR019756 Peptidase S26A, signal peptidase I, serine active site APS55_RS02805 IPR019757 Peptidase S26A, signal peptidase I, lysine active site APS55_RS02805 IPR000223 Peptidase S26A, signal peptidase I APS55_RS02810 IPR019757 Peptidase S26A, signal peptidase I, lysine active site APS55_RS02810 IPR000223 Peptidase S26A, signal peptidase I APS55_RS02810 IPR019758 Peptidase S26A, signal peptidase I, conserved site APS55_RS02810 IPR019756 Peptidase S26A, signal peptidase I, serine active site APS55_RS02810 IPR019533 Peptidase S26 APS55_RS02810 IPR036286 LexA/Signal peptidase-like superfamily APS55_RS02820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS02820 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS02820 IPR005814 Aminotransferase class-III APS55_RS02820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS02825 IPR038765 Papain-like cysteine peptidase superfamily APS55_RS02825 IPR025660 Cysteine peptidase, histidine active site APS55_RS02825 IPR000169 Cysteine peptidase, cysteine active site APS55_RS02825 IPR004134 Peptidase C1B, bleomycin hydrolase APS55_RS02830 IPR025660 Cysteine peptidase, histidine active site APS55_RS02830 IPR000169 Cysteine peptidase, cysteine active site APS55_RS02830 IPR038765 Papain-like cysteine peptidase superfamily APS55_RS02830 IPR004134 Peptidase C1B, bleomycin hydrolase APS55_RS02835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS02835 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body APS55_RS02835 IPR023434 Argininosuccinate synthase, type 1 subfamily APS55_RS02835 IPR018223 Argininosuccinate synthase, conserved site APS55_RS02835 IPR001518 Argininosuccinate synthase APS55_RS02840 IPR000362 Fumarate lyase family APS55_RS02840 IPR029419 Argininosuccinate lyase, C-terminal APS55_RS02840 IPR024083 Fumarase/histidase, N-terminal APS55_RS02840 IPR008948 L-Aspartase-like APS55_RS02840 IPR009049 Argininosuccinate lyase APS55_RS02840 IPR020557 Fumarate lyase, conserved site APS55_RS02840 IPR022761 Fumarate lyase, N-terminal APS55_RS02845 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APS55_RS02845 IPR035906 MetI-like superfamily APS55_RS02845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS02850 IPR003439 ABC transporter-like APS55_RS02850 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APS55_RS02850 IPR003593 AAA+ ATPase domain APS55_RS02850 IPR017871 ABC transporter, conserved site APS55_RS02850 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02870 IPR006276 Cobalamin-independent methionine synthase APS55_RS02870 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal APS55_RS02870 IPR038071 UROD/MetE-like superfamily APS55_RS02870 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal APS55_RS02875 IPR029062 Class I glutamine amidotransferase-like APS55_RS02875 IPR033752 MetA family APS55_RS02880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS02880 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase APS55_RS02880 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS02880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS02880 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APS55_RS02885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS02885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS02885 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS02885 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme APS55_RS02890 IPR019811 Homoserine dehydrogenase, conserved site APS55_RS02890 IPR002912 ACT domain APS55_RS02890 IPR001342 Homoserine dehydrogenase, catalytic APS55_RS02890 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding APS55_RS02890 IPR036291 NAD(P)-binding domain superfamily APS55_RS02890 IPR016204 Homoserine dehydrogenase APS55_RS02900 IPR038965 Transposase InsF-like APS55_RS02900 IPR036397 Ribonuclease H superfamily APS55_RS02900 IPR001584 Integrase, catalytic core APS55_RS02900 IPR012337 Ribonuclease H-like superfamily APS55_RS02915 IPR030874 Cardiolipin synthase, Firmicutes-type APS55_RS02915 IPR001736 Phospholipase D/Transphosphatidylase APS55_RS02915 IPR025202 Phospholipase D-like domain APS55_RS02915 IPR027379 Cardiolipin synthase N-terminal APS55_RS02915 IPR022924 Cardiolipin synthase APS55_RS02920 IPR023031 Orotate phosphoribosyltransferase APS55_RS02920 IPR004467 Orotate phosphoribosyl transferase domain APS55_RS02920 IPR029057 Phosphoribosyltransferase-like APS55_RS02920 IPR000836 Phosphoribosyltransferase domain APS55_RS02925 IPR018089 Orotidine 5'-phosphate decarboxylase, active site APS55_RS02925 IPR013785 Aldolase-type TIM barrel APS55_RS02925 IPR001754 Orotidine 5'-phosphate decarboxylase domain APS55_RS02925 IPR011060 Ribulose-phosphate binding barrel APS55_RS02925 IPR014732 Orotidine 5'-phosphate decarboxylase APS55_RS02930 IPR036259 MFS transporter superfamily APS55_RS02930 IPR020846 Major facilitator superfamily domain APS55_RS02930 IPR011701 Major facilitator superfamily APS55_RS02930 IPR005829 Sugar transporter, conserved site APS55_RS02940 IPR036397 Ribonuclease H superfamily APS55_RS02940 IPR038965 Transposase InsF-like APS55_RS02940 IPR001584 Integrase, catalytic core APS55_RS02940 IPR012337 Ribonuclease H-like superfamily APS55_RS02940 IPR025948 HTH-like domain APS55_RS02960 IPR003646 SH3-like domain, bacterial-type APS55_RS02960 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted APS55_RS02960 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain APS55_RS02965 IPR017882 Zinc import ATP-binding protein ZnuC APS55_RS02965 IPR003593 AAA+ ATPase domain APS55_RS02965 IPR003439 ABC transporter-like APS55_RS02965 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02970 IPR001626 ABC transporter, TroCD-like APS55_RS02970 IPR037294 ABC transporter, BtuC-like APS55_RS02985 IPR013570 Transcription regulator YsiA, C-terminal APS55_RS02985 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily APS55_RS02985 IPR001647 DNA-binding HTH domain, TetR-type APS55_RS02985 IPR009057 Homeobox-like domain superfamily APS55_RS02990 IPR013842 GTP-binding protein LepA, C-terminal APS55_RS02990 IPR035654 Elongation factor 4, domain IV APS55_RS02990 IPR005225 Small GTP-binding protein domain APS55_RS02990 IPR000795 Transcription factor, GTP-binding domain APS55_RS02990 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS02990 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS02990 IPR000640 Elongation factor EFG, domain V-like APS55_RS02990 IPR038363 LepA, C-terminal domain superfamily APS55_RS02990 IPR035647 EF-G domain III/V-like APS55_RS02990 IPR006297 Elongation factor 4 APS55_RS02995 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS55_RS02995 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS55_RS02995 IPR018146 Glyoxalase I, conserved site APS55_RS02995 IPR037523 Vicinal oxygen chelate (VOC) domain APS55_RS03000 IPR013154 Alcohol dehydrogenase, N-terminal APS55_RS03000 IPR013149 Alcohol dehydrogenase, C-terminal APS55_RS03000 IPR036291 NAD(P)-binding domain superfamily APS55_RS03000 IPR011032 GroES-like superfamily APS55_RS03000 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APS55_RS03005 IPR000600 ROK family APS55_RS03010 IPR003691 Putative fluoride ion transporter CrcB APS55_RS03015 IPR003691 Putative fluoride ion transporter CrcB APS55_RS03020 IPR012337 Ribonuclease H-like superfamily APS55_RS03020 IPR022892 Ribonuclease HI APS55_RS03020 IPR002156 Ribonuclease H domain APS55_RS03020 IPR036397 Ribonuclease H superfamily APS55_RS03030 IPR026033 Azaguanine-like transporters APS55_RS03030 IPR006043 Xanthine/uracil/vitamin C permease APS55_RS03035 IPR020471 Aldo/keto reductase APS55_RS03035 IPR018170 Aldo/keto reductase, conserved site APS55_RS03035 IPR036812 NADP-dependent oxidoreductase domain superfamily APS55_RS03035 IPR023210 NADP-dependent oxidoreductase domain APS55_RS03050 IPR004841 Amino acid permease/ SLC12A domain APS55_RS03055 IPR004841 Amino acid permease/ SLC12A domain APS55_RS03055 IPR004840 Amino acid permease, conserved site APS55_RS03075 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain APS55_RS03075 IPR027407 Manganese catalase, C-terminal APS55_RS03075 IPR007760 Manganese catalase APS55_RS03075 IPR009078 Ferritin-like superfamily APS55_RS03075 IPR012347 Ferritin-like APS55_RS03080 IPR000212 DNA helicase, UvrD/REP type APS55_RS03080 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type APS55_RS03080 IPR014141 DNA helicase subunit RexB APS55_RS03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03085 IPR014152 DNA helicase subunit AddA APS55_RS03085 IPR034739 UvrD/AddA helicase, N-terminal APS55_RS03085 IPR014016 UvrD-like helicase, ATP-binding domain APS55_RS03085 IPR011335 Restriction endonuclease type II-like APS55_RS03085 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type APS55_RS03085 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03085 IPR011604 Exonuclease, phage-type/RecB, C-terminal APS55_RS03085 IPR014017 UvrD-like DNA helicase, C-terminal APS55_RS03085 IPR000212 DNA helicase, UvrD/REP type APS55_RS03095 IPR003593 AAA+ ATPase domain APS55_RS03095 IPR003439 ABC transporter-like APS55_RS03095 IPR017871 ABC transporter, conserved site APS55_RS03095 IPR025302 Domain of unknown function DUF4162 APS55_RS03095 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03100 IPR016163 Aldehyde dehydrogenase, C-terminal APS55_RS03100 IPR039697 Iron-type alcohol dehydrogenase-like APS55_RS03100 IPR016161 Aldehyde/histidinol dehydrogenase APS55_RS03100 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA APS55_RS03100 IPR018211 Alcohol dehydrogenase, iron-type, conserved site APS55_RS03100 IPR016162 Aldehyde dehydrogenase, N-terminal APS55_RS03100 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain APS55_RS03100 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase APS55_RS03100 IPR015590 Aldehyde dehydrogenase domain APS55_RS03110 IPR018383 Uncharacterised protein family UPF0324, prokaryote APS55_RS03120 IPR004638 Drug resistance transporter EmrB-like APS55_RS03120 IPR036259 MFS transporter superfamily APS55_RS03120 IPR020846 Major facilitator superfamily domain APS55_RS03120 IPR011701 Major facilitator superfamily APS55_RS03130 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APS55_RS03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03130 IPR003593 AAA+ ATPase domain APS55_RS03130 IPR017871 ABC transporter, conserved site APS55_RS03130 IPR003439 ABC transporter-like APS55_RS03135 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS03135 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APS55_RS03135 IPR035906 MetI-like superfamily APS55_RS03140 IPR041546 ClpA/ClpB, AAA lid domain APS55_RS03140 IPR003593 AAA+ ATPase domain APS55_RS03140 IPR003959 ATPase, AAA-type, core APS55_RS03140 IPR019489 Clp ATPase, C-terminal APS55_RS03140 IPR001270 ClpA/B family APS55_RS03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03140 IPR028299 ClpA/B, conserved site 2 APS55_RS03160 IPR036291 NAD(P)-binding domain superfamily APS55_RS03160 IPR012302 Malic enzyme, NAD-binding APS55_RS03160 IPR015884 Malic enzyme, conserved site APS55_RS03160 IPR001891 Malic oxidoreductase APS55_RS03160 IPR012301 Malic enzyme, N-terminal domain APS55_RS03160 IPR037062 Malic enzyme, N-terminal domain superfamily APS55_RS03165 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS03165 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS03165 IPR000847 Transcription regulator HTH, LysR APS55_RS03165 IPR005119 LysR, substrate-binding APS55_RS03180 IPR038965 Transposase InsF-like APS55_RS03180 IPR001584 Integrase, catalytic core APS55_RS03180 IPR012337 Ribonuclease H-like superfamily APS55_RS03180 IPR036397 Ribonuclease H superfamily APS55_RS03190 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APS55_RS03190 IPR018313 Solute-binding protein family 3, conserved site APS55_RS03195 IPR003439 ABC transporter-like APS55_RS03195 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APS55_RS03195 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03195 IPR017871 ABC transporter, conserved site APS55_RS03195 IPR003593 AAA+ ATPase domain APS55_RS03200 IPR035906 MetI-like superfamily APS55_RS03200 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APS55_RS03200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS03205 IPR023408 Mechanosensitive ion channel MscS domain superfamily APS55_RS03205 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APS55_RS03205 IPR011066 Mechanosensitive ion channel MscS, C-terminal APS55_RS03205 IPR006685 Mechanosensitive ion channel MscS APS55_RS03205 IPR010920 LSM domain superfamily APS55_RS03210 IPR011066 Mechanosensitive ion channel MscS, C-terminal APS55_RS03210 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 APS55_RS03210 IPR023408 Mechanosensitive ion channel MscS domain superfamily APS55_RS03210 IPR006685 Mechanosensitive ion channel MscS APS55_RS03210 IPR010920 LSM domain superfamily APS55_RS03225 IPR003439 ABC transporter-like APS55_RS03225 IPR003838 ABC transporter permease protein domain APS55_RS03225 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03225 IPR025857 MacB-like periplasmic core domain APS55_RS03225 IPR017871 ABC transporter, conserved site APS55_RS03225 IPR003593 AAA+ ATPase domain APS55_RS03225 IPR017911 ABC transporter, macrolide export, ATP-binding domain APS55_RS03255 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS03255 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APS55_RS03255 IPR023753 FAD/NAD(P)-binding domain APS55_RS03255 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS03270 IPR003593 AAA+ ATPase domain APS55_RS03270 IPR003439 ABC transporter-like APS55_RS03270 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03295 IPR030395 Glycerophosphodiester phosphodiesterase domain APS55_RS03295 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily APS55_RS03310 IPR038965 Transposase InsF-like APS55_RS03310 IPR001584 Integrase, catalytic core APS55_RS03310 IPR012337 Ribonuclease H-like superfamily APS55_RS03310 IPR036397 Ribonuclease H superfamily APS55_RS03330 IPR008310 UPF0735 ACT domain-containing protein APS55_RS03330 IPR002912 ACT domain APS55_RS03335 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS03335 IPR013750 GHMP kinase, C-terminal domain APS55_RS03335 IPR036554 GHMP kinase, C-terminal domain superfamily APS55_RS03335 IPR000870 Homoserine kinase APS55_RS03335 IPR006203 GHMP kinase, ATP-binding, conserved site APS55_RS03335 IPR006204 GHMP kinase N-terminal domain APS55_RS03335 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS03340 IPR004450 Threonine synthase-like APS55_RS03340 IPR037158 Threonine synthase, N-terminal domain superfamily APS55_RS03340 IPR029144 Threonine synthase, N-terminal APS55_RS03340 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site APS55_RS03340 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS55_RS03340 IPR001926 Pyridoxal-phosphate dependent enzyme APS55_RS03345 IPR001342 Homoserine dehydrogenase, catalytic APS55_RS03345 IPR019811 Homoserine dehydrogenase, conserved site APS55_RS03345 IPR002912 ACT domain APS55_RS03345 IPR036291 NAD(P)-binding domain superfamily APS55_RS03345 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding APS55_RS03345 IPR016204 Homoserine dehydrogenase APS55_RS03365 IPR011614 Catalase core domain APS55_RS03365 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 APS55_RS03365 IPR018028 Catalase, mono-functional, haem-containing APS55_RS03365 IPR024708 Catalase active site APS55_RS03365 IPR010582 Catalase immune-responsive domain APS55_RS03365 IPR002226 Catalase haem-binding site APS55_RS03365 IPR037060 Catalase core domain superfamily APS55_RS03365 IPR040333 Catalase, clade 3 APS55_RS03365 IPR020835 Catalase superfamily APS55_RS03375 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS55_RS03375 IPR003742 RNA methyltransferase RlmH APS55_RS03375 IPR029028 Alpha/beta knot methyltransferases APS55_RS03380 IPR001387 Cro/C1-type helix-turn-helix domain APS55_RS03380 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APS55_RS03400 IPR018337 Cell wall/choline-binding repeat APS55_RS03400 IPR027636 Glucan-binding repeat APS55_RS03400 IPR022263 KxYKxGKxW signal peptide APS55_RS03400 IPR003318 Glycoside hydrolase, family 70, catalytic domain APS55_RS03400 IPR017853 Glycoside hydrolase superfamily APS55_RS03410 IPR014782 Peptidase M1, membrane alanine aminopeptidase APS55_RS03410 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase APS55_RS03410 IPR024571 ERAP1-like C-terminal domain APS55_RS03410 IPR034016 Aminopeptidase N-type APS55_RS03410 IPR042097 Aminopeptidase N-like , N-terminal APS55_RS03415 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS03415 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily APS55_RS03415 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal APS55_RS03415 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APS55_RS03415 IPR015956 Penicillin-binding protein, C-terminal domain superfamily APS55_RS03415 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APS55_RS03420 IPR035893 PurE domain superfamily APS55_RS03420 IPR024694 PurE, prokaryotic type APS55_RS03420 IPR000031 PurE domain APS55_RS03420 IPR033747 Class I PurE APS55_RS03425 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain APS55_RS03425 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit APS55_RS03425 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS03425 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type APS55_RS03425 IPR011761 ATP-grasp fold APS55_RS03425 IPR011054 Rudiment single hybrid motif APS55_RS03425 IPR013815 ATP-grasp fold, subdomain 1 APS55_RS03430 IPR028923 SAICAR synthetase/ADE2, N-terminal APS55_RS03430 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase APS55_RS03430 IPR018236 SAICAR synthetase, conserved site APS55_RS03430 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase APS55_RS03440 IPR029062 Class I glutamine amidotransferase-like APS55_RS03440 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ APS55_RS03440 IPR017926 Glutamine amidotransferase APS55_RS03445 IPR036921 PurM-like, N-terminal domain superfamily APS55_RS03445 IPR016188 PurM-like, N-terminal domain APS55_RS03445 IPR036676 PurM-like, C-terminal domain superfamily APS55_RS03445 IPR010918 PurM-like, C-terminal domain APS55_RS03445 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain APS55_RS03445 IPR010074 Phosphoribosylformylglycinamidine subunit PurL APS55_RS03450 IPR029055 Nucleophile aminohydrolases, N-terminal APS55_RS03450 IPR035584 Amidophosphoribosyltransferase, N-terminal APS55_RS03450 IPR005854 Amidophosphoribosyltransferase APS55_RS03450 IPR029057 Phosphoribosyltransferase-like APS55_RS03450 IPR000836 Phosphoribosyltransferase domain APS55_RS03450 IPR017932 Glutamine amidotransferase type 2 domain APS55_RS03455 IPR036676 PurM-like, C-terminal domain superfamily APS55_RS03455 IPR016188 PurM-like, N-terminal domain APS55_RS03455 IPR036921 PurM-like, N-terminal domain superfamily APS55_RS03455 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase APS55_RS03455 IPR010918 PurM-like, C-terminal domain APS55_RS03460 IPR036477 Formyl transferase, N-terminal domain superfamily APS55_RS03460 IPR004607 Phosphoribosylglycinamide formyltransferase APS55_RS03460 IPR001555 Phosphoribosylglycinamide formyltransferase, active site APS55_RS03460 IPR002376 Formyl transferase, N-terminal APS55_RS03465 IPR024051 AICAR transformylase, duplicated domain superfamily APS55_RS03465 IPR016193 Cytidine deaminase-like APS55_RS03465 IPR011607 Methylglyoxal synthase-like domain APS55_RS03465 IPR036914 Methylglyoxal synthase-like domain superfamily APS55_RS03465 IPR002695 Bifunctional purine biosynthesis protein PurH-like APS55_RS03470 IPR013815 ATP-grasp fold, subdomain 1 APS55_RS03470 IPR020560 Phosphoribosylglycinamide synthetase, C-domain APS55_RS03470 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily APS55_RS03470 IPR020559 Phosphoribosylglycinamide synthetase, conserved site APS55_RS03470 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal APS55_RS03470 IPR011054 Rudiment single hybrid motif APS55_RS03470 IPR011761 ATP-grasp fold APS55_RS03470 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APS55_RS03470 IPR000115 Phosphoribosylglycinamide synthetase APS55_RS03470 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS03480 IPR036259 MFS transporter superfamily APS55_RS03480 IPR011701 Major facilitator superfamily APS55_RS03480 IPR020846 Major facilitator superfamily domain APS55_RS03480 IPR005829 Sugar transporter, conserved site APS55_RS03490 IPR000944 Transcription regulator Rrf2-type APS55_RS03490 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS03490 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS03495 IPR036291 NAD(P)-binding domain superfamily APS55_RS03495 IPR008030 NmrA-like domain APS55_RS03515 IPR000399 TPP-binding enzyme, conserved site APS55_RS03515 IPR012782 Acetolactate synthase, catabolic APS55_RS03515 IPR029035 DHS-like NAD/FAD-binding domain superfamily APS55_RS03515 IPR029061 Thiamin diphosphate-binding fold APS55_RS03515 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding APS55_RS03515 IPR012000 Thiamine pyrophosphate enzyme, central domain APS55_RS03515 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain APS55_RS03535 IPR001584 Integrase, catalytic core APS55_RS03535 IPR036397 Ribonuclease H superfamily APS55_RS03535 IPR012337 Ribonuclease H-like superfamily APS55_RS03535 IPR038965 Transposase InsF-like APS55_RS03555 IPR023692 Multidrug resistance protein MdtG APS55_RS03555 IPR020846 Major facilitator superfamily domain APS55_RS03555 IPR011701 Major facilitator superfamily APS55_RS03555 IPR036259 MFS transporter superfamily APS55_RS03555 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APS55_RS03565 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal APS55_RS03565 IPR023663 NADPH dehydrogenase APS55_RS03565 IPR013785 Aldolase-type TIM barrel APS55_RS03580 IPR006286 Deglycase PfpI APS55_RS03580 IPR002818 DJ-1/PfpI APS55_RS03580 IPR029062 Class I glutamine amidotransferase-like APS55_RS03590 IPR038965 Transposase InsF-like APS55_RS03590 IPR036397 Ribonuclease H superfamily APS55_RS03590 IPR012337 Ribonuclease H-like superfamily APS55_RS03590 IPR001584 Integrase, catalytic core APS55_RS03600 IPR000425 Major intrinsic protein APS55_RS03600 IPR022357 Major intrinsic protein, conserved site APS55_RS03600 IPR023271 Aquaporin-like APS55_RS03605 IPR005128 Alpha-acetolactate decarboxylase APS55_RS03615 IPR011438 Domain of unknown function DUF1541 APS55_RS03635 IPR029062 Class I glutamine amidotransferase-like APS55_RS03635 IPR017926 Glutamine amidotransferase APS55_RS03635 IPR011697 Peptidase C26 APS55_RS03640 IPR000914 Solute-binding protein family 5 domain APS55_RS03640 IPR039424 Solute-binding protein family 5 APS55_RS03640 IPR030678 Peptide/nickel binding protein, MppA-type APS55_RS03640 IPR023765 Solute-binding protein family 5, conserved site APS55_RS03645 IPR000914 Solute-binding protein family 5 domain APS55_RS03645 IPR023765 Solute-binding protein family 5, conserved site APS55_RS03645 IPR039424 Solute-binding protein family 5 APS55_RS03645 IPR030678 Peptide/nickel binding protein, MppA-type APS55_RS03655 IPR003439 ABC transporter-like APS55_RS03655 IPR017871 ABC transporter, conserved site APS55_RS03655 IPR015851 ABC transporter, NodI APS55_RS03655 IPR005978 Nodulation ABC transporter, NodI APS55_RS03655 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03655 IPR003593 AAA+ ATPase domain APS55_RS03665 IPR011006 CheY-like superfamily APS55_RS03665 IPR007492 LytTR DNA-binding domain APS55_RS03665 IPR001789 Signal transduction response regulator, receiver domain APS55_RS03690 IPR022761 Fumarate lyase, N-terminal APS55_RS03690 IPR000362 Fumarate lyase family APS55_RS03690 IPR020557 Fumarate lyase, conserved site APS55_RS03690 IPR008948 L-Aspartase-like APS55_RS03690 IPR024083 Fumarase/histidase, N-terminal APS55_RS03690 IPR005677 Fumarate hydratase, class II APS55_RS03690 IPR018951 Fumarase C, C-terminal APS55_RS03715 IPR007156 LemA APS55_RS03715 IPR023353 LemA-like domain superfamily APS55_RS03725 IPR004685 Branched-chain amino acid transport system II carrier protein APS55_RS03735 IPR004685 Branched-chain amino acid transport system II carrier protein APS55_RS03745 IPR001126 UmuC domain APS55_RS03745 IPR024728 DNA polymerase type-Y, HhH motif APS55_RS03745 IPR036775 DNA polymerase, Y-family, little finger domain superfamily APS55_RS03745 IPR017961 DNA polymerase, Y-family, little finger domain APS55_RS03765 IPR001046 NRAMP family APS55_RS03770 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU APS55_RS03770 IPR004474 Cell envelope-related transcriptional attenuator domain APS55_RS03775 IPR005701 Polysaccharide export protein MPA1-like APS55_RS03775 IPR003856 Polysaccharide chain length determinant N-terminal domain APS55_RS03780 IPR025669 AAA domain APS55_RS03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03780 IPR005702 Exopolysaccharide synthesis protein APS55_RS03785 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC APS55_RS03785 IPR016195 Polymerase/histidinol phosphatase-like APS55_RS03790 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APS55_RS03790 IPR003362 Bacterial sugar transferase APS55_RS03795 IPR001296 Glycosyl transferase, family 1 APS55_RS03795 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS55_RS03800 IPR001173 Glycosyltransferase 2-like APS55_RS03800 IPR029044 Nucleotide-diphospho-sugar transferases APS55_RS03820 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG APS55_RS03820 IPR023692 Multidrug resistance protein MdtG APS55_RS03820 IPR036259 MFS transporter superfamily APS55_RS03820 IPR005828 Major facilitator, sugar transporter-like APS55_RS03820 IPR011701 Major facilitator superfamily APS55_RS03820 IPR020846 Major facilitator superfamily domain APS55_RS03835 IPR030678 Peptide/nickel binding protein, MppA-type APS55_RS03835 IPR000914 Solute-binding protein family 5 domain APS55_RS03835 IPR023765 Solute-binding protein family 5, conserved site APS55_RS03835 IPR039424 Solute-binding protein family 5 APS55_RS03845 IPR018337 Cell wall/choline-binding repeat APS55_RS03845 IPR017853 Glycoside hydrolase superfamily APS55_RS03845 IPR022263 KxYKxGKxW signal peptide APS55_RS03845 IPR003318 Glycoside hydrolase, family 70, catalytic domain APS55_RS03845 IPR027636 Glucan-binding repeat APS55_RS03850 IPR027636 Glucan-binding repeat APS55_RS03850 IPR022263 KxYKxGKxW signal peptide APS55_RS03850 IPR017853 Glycoside hydrolase superfamily APS55_RS03850 IPR003318 Glycoside hydrolase, family 70, catalytic domain APS55_RS03850 IPR018337 Cell wall/choline-binding repeat APS55_RS03860 IPR023753 FAD/NAD(P)-binding domain APS55_RS03860 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily APS55_RS03860 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS03860 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS03870 IPR012337 Ribonuclease H-like superfamily APS55_RS03870 IPR001584 Integrase, catalytic core APS55_RS03870 IPR038965 Transposase InsF-like APS55_RS03870 IPR036397 Ribonuclease H superfamily APS55_RS03880 IPR002293 Amino acid/polyamine transporter I APS55_RS03880 IPR004758 Amino acid transporter APS55_RS03885 IPR004841 Amino acid permease/ SLC12A domain APS55_RS03885 IPR004840 Amino acid permease, conserved site APS55_RS03890 IPR004841 Amino acid permease/ SLC12A domain APS55_RS03890 IPR004840 Amino acid permease, conserved site APS55_RS03895 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS03895 IPR000835 MarR-type HTH domain APS55_RS03895 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS03910 IPR017871 ABC transporter, conserved site APS55_RS03910 IPR003439 ABC transporter-like APS55_RS03910 IPR022501 Gallidermin ABC transporter, ATP-binding subunit APS55_RS03910 IPR003593 AAA+ ATPase domain APS55_RS03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03920 IPR005744 Hly-III APS55_RS03920 IPR004254 AdipoR/Haemolysin-III-related APS55_RS03925 IPR000390 Small multidrug resistance protein family APS55_RS03940 IPR018392 LysM domain APS55_RS03940 IPR003646 SH3-like domain, bacterial-type APS55_RS03940 IPR038765 Papain-like cysteine peptidase superfamily APS55_RS03940 IPR000064 Endopeptidase, NLPC/P60 domain APS55_RS03940 IPR036779 LysM domain superfamily APS55_RS03965 IPR036291 NAD(P)-binding domain superfamily APS55_RS03965 IPR016040 NAD(P)-binding domain APS55_RS03970 IPR032781 ABC-transporter extension domain APS55_RS03970 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS03970 IPR003593 AAA+ ATPase domain APS55_RS03970 IPR003439 ABC transporter-like APS55_RS03995 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I APS55_RS03995 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III APS55_RS03995 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II APS55_RS03995 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily APS55_RS03995 IPR016066 Alpha-D-phosphohexomutase, conserved site APS55_RS03995 IPR005841 Alpha-D-phosphohexomutase superfamily APS55_RS03995 IPR005843 Alpha-D-phosphohexomutase, C-terminal APS55_RS03995 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III APS55_RS04000 IPR000415 Nitroreductase-like APS55_RS04000 IPR029479 Nitroreductase APS55_RS04000 IPR033878 Nitroreductase NfsB-like APS55_RS04005 IPR016039 Thiolase-like APS55_RS04005 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 APS55_RS04005 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal APS55_RS04005 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS55_RS04010 IPR009081 Phosphopantetheine binding ACP domain APS55_RS04010 IPR003231 Acyl carrier protein (ACP) APS55_RS04010 IPR036736 ACP-like superfamily APS55_RS04015 IPR014043 Acyl transferase APS55_RS04015 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APS55_RS04015 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APS55_RS04015 IPR024925 Malonyl CoA-acyl carrier protein transacylase APS55_RS04015 IPR001227 Acyl transferase domain superfamily APS55_RS04015 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type APS55_RS04020 IPR020904 Short-chain dehydrogenase/reductase, conserved site APS55_RS04020 IPR002347 Short-chain dehydrogenase/reductase SDR APS55_RS04020 IPR036291 NAD(P)-binding domain superfamily APS55_RS04020 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase APS55_RS04025 IPR001882 Biotin-binding site APS55_RS04025 IPR000089 Biotin/lipoyl attachment APS55_RS04025 IPR011053 Single hybrid motif APS55_RS04025 IPR001249 Acetyl-CoA biotin carboxyl carrier APS55_RS04030 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ APS55_RS04030 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ APS55_RS04030 IPR029069 HotDog domain superfamily APS55_RS04035 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APS55_RS04035 IPR011054 Rudiment single hybrid motif APS55_RS04035 IPR005481 Biotin carboxylase-like, N-terminal domain APS55_RS04035 IPR011764 Biotin carboxylation domain APS55_RS04035 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS04035 IPR011761 ATP-grasp fold APS55_RS04035 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase APS55_RS04035 IPR005482 Biotin carboxylase, C-terminal APS55_RS04040 IPR034733 Acetyl-CoA carboxylase APS55_RS04040 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal APS55_RS04040 IPR029045 ClpP/crotonase-like domain superfamily APS55_RS04040 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit APS55_RS04045 IPR029045 ClpP/crotonase-like domain superfamily APS55_RS04045 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal APS55_RS04045 IPR001095 Acetyl-CoA carboxylase, alpha subunit APS55_RS04050 IPR036291 NAD(P)-binding domain superfamily APS55_RS04050 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) APS55_RS04050 IPR002347 Short-chain dehydrogenase/reductase SDR APS55_RS04060 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ APS55_RS04060 IPR029069 HotDog domain superfamily APS55_RS04060 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ APS55_RS04065 IPR014031 Beta-ketoacyl synthase, C-terminal APS55_RS04065 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APS55_RS04065 IPR016039 Thiolase-like APS55_RS04065 IPR000794 Beta-ketoacyl synthase APS55_RS04065 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 APS55_RS04065 IPR014030 Beta-ketoacyl synthase, N-terminal APS55_RS04065 IPR018201 Beta-ketoacyl synthase, active site APS55_RS04070 IPR016040 NAD(P)-binding domain APS55_RS04070 IPR005886 UDP-glucose 4-epimerase APS55_RS04070 IPR036291 NAD(P)-binding domain superfamily APS55_RS04075 IPR020471 Aldo/keto reductase APS55_RS04075 IPR023210 NADP-dependent oxidoreductase domain APS55_RS04075 IPR036812 NADP-dependent oxidoreductase domain superfamily APS55_RS04075 IPR018170 Aldo/keto reductase, conserved site APS55_RS04080 IPR000620 EamA domain APS55_RS04090 IPR004869 Membrane transport protein MMPL domain APS55_RS04090 IPR000731 Sterol-sensing domain APS55_RS04100 IPR002293 Amino acid/polyamine transporter I APS55_RS04105 IPR000620 EamA domain APS55_RS04150 IPR012340 Nucleic acid-binding, OB-fold APS55_RS04150 IPR011129 Cold shock domain APS55_RS04150 IPR012156 Cold shock, CspA APS55_RS04150 IPR019844 Cold-shock (CSD) domain APS55_RS04150 IPR002059 Cold-shock protein, DNA-binding APS55_RS04155 IPR017871 ABC transporter, conserved site APS55_RS04155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APS55_RS04155 IPR003439 ABC transporter-like APS55_RS04155 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04155 IPR003593 AAA+ ATPase domain APS55_RS04160 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04160 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APS55_RS04160 IPR017871 ABC transporter, conserved site APS55_RS04160 IPR003439 ABC transporter-like APS55_RS04160 IPR003593 AAA+ ATPase domain APS55_RS04165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS04165 IPR035906 MetI-like superfamily APS55_RS04170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS04170 IPR035906 MetI-like superfamily APS55_RS04175 IPR030678 Peptide/nickel binding protein, MppA-type APS55_RS04175 IPR000914 Solute-binding protein family 5 domain APS55_RS04175 IPR023765 Solute-binding protein family 5, conserved site APS55_RS04175 IPR039424 Solute-binding protein family 5 APS55_RS04180 IPR029039 Flavoprotein-like superfamily APS55_RS04180 IPR003680 Flavodoxin-like fold APS55_RS04195 IPR038965 Transposase InsF-like APS55_RS04195 IPR001584 Integrase, catalytic core APS55_RS04195 IPR025948 HTH-like domain APS55_RS04195 IPR036397 Ribonuclease H superfamily APS55_RS04195 IPR012337 Ribonuclease H-like superfamily APS55_RS04200 IPR029056 Ribokinase-like APS55_RS04200 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase APS55_RS04200 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase APS55_RS04210 IPR001451 Hexapeptide repeat APS55_RS04210 IPR024688 Maltose/galactoside acetyltransferase APS55_RS04210 IPR018357 Hexapeptide transferase, conserved site APS55_RS04210 IPR011004 Trimeric LpxA-like superfamily APS55_RS04215 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT APS55_RS04215 IPR000060 BCCT transporter family APS55_RS04215 IPR018093 BCCT transporter, conserved site APS55_RS04220 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APS55_RS04220 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS55_RS04220 IPR036291 NAD(P)-binding domain superfamily APS55_RS04220 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APS55_RS04225 IPR036005 Creatinase/aminopeptidase-like APS55_RS04225 IPR000994 Peptidase M24 APS55_RS04225 IPR001714 Peptidase M24, methionine aminopeptidase APS55_RS04225 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 APS55_RS04235 IPR036259 MFS transporter superfamily APS55_RS04235 IPR020846 Major facilitator superfamily domain APS55_RS04235 IPR011701 Major facilitator superfamily APS55_RS04235 IPR004638 Drug resistance transporter EmrB-like APS55_RS04240 IPR024079 Metallopeptidase, catalytic domain superfamily APS55_RS04240 IPR000718 Peptidase M13 APS55_RS04240 IPR018497 Peptidase M13, C-terminal domain APS55_RS04240 IPR042089 Peptidase M13, domain 2 APS55_RS04240 IPR008753 Peptidase M13, N-terminal domain APS55_RS04245 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain APS55_RS04250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS04250 IPR035906 MetI-like superfamily APS55_RS04255 IPR003439 ABC transporter-like APS55_RS04255 IPR005892 Glycine betaine transport ATP-binding subunit APS55_RS04255 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04255 IPR000644 CBS domain APS55_RS04255 IPR017871 ABC transporter, conserved site APS55_RS04255 IPR003593 AAA+ ATPase domain APS55_RS04270 IPR011659 WD40-like Beta Propeller APS55_RS04270 IPR011042 Six-bladed beta-propeller, TolB-like APS55_RS04270 IPR029058 Alpha/Beta hydrolase fold APS55_RS04270 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain APS55_RS04280 IPR004872 Lipoprotein NlpA family APS55_RS04285 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04285 IPR017871 ABC transporter, conserved site APS55_RS04285 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APS55_RS04285 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APS55_RS04285 IPR003593 AAA+ ATPase domain APS55_RS04285 IPR026253 Methionine import ATP-binding protein MetN APS55_RS04285 IPR003439 ABC transporter-like APS55_RS04285 IPR018449 NIL domain APS55_RS04290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS04290 IPR035906 MetI-like superfamily APS55_RS04295 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase APS55_RS04295 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APS55_RS04295 IPR036264 Bacterial exopeptidase dimerisation domain APS55_RS04295 IPR002933 Peptidase M20 APS55_RS04295 IPR011650 Peptidase M20, dimerisation domain APS55_RS04310 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS04310 IPR004839 Aminotransferase, class I/classII APS55_RS04310 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APS55_RS04310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS04310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS04315 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APS55_RS04315 IPR007566 Phosphoenolpyruvate carboxylase, archaeal-type APS55_RS04320 IPR011701 Major facilitator superfamily APS55_RS04320 IPR004638 Drug resistance transporter EmrB-like APS55_RS04320 IPR020846 Major facilitator superfamily domain APS55_RS04320 IPR036259 MFS transporter superfamily APS55_RS04330 IPR001653 Diaminopimelate epimerase, DapF APS55_RS04330 IPR018510 Diaminopimelate epimerase, active site APS55_RS04335 IPR018042 Aspartate kinase, conserved site APS55_RS04335 IPR002912 ACT domain APS55_RS04335 IPR035804 Aspartokinase 3, N-terminal APS55_RS04335 IPR027795 CASTOR, ACT domain APS55_RS04335 IPR036393 Acetylglutamate kinase-like superfamily APS55_RS04335 IPR001048 Aspartate/glutamate/uridylate kinase APS55_RS04335 IPR005260 Aspartate kinase, monofunctional class APS55_RS04335 IPR001341 Aspartate kinase APS55_RS04340 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal APS55_RS04340 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site APS55_RS04340 IPR000183 Ornithine/DAP/Arg decarboxylase APS55_RS04340 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal APS55_RS04340 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site APS55_RS04340 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal APS55_RS04340 IPR002986 Diaminopimelate decarboxylase, LysA APS55_RS04340 IPR029066 PLP-binding barrel APS55_RS04345 IPR011004 Trimeric LpxA-like superfamily APS55_RS04345 IPR018357 Hexapeptide transferase, conserved site APS55_RS04345 IPR001451 Hexapeptide repeat APS55_RS04345 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal APS55_RS04345 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH APS55_RS04350 IPR036264 Bacterial exopeptidase dimerisation domain APS55_RS04350 IPR023905 Acetyldiaminopimelate deacetylase APS55_RS04350 IPR017439 Amidohydrolase APS55_RS04350 IPR002933 Peptidase M20 APS55_RS04350 IPR011650 Peptidase M20, dimerisation domain APS55_RS04355 IPR002220 DapA-like APS55_RS04355 IPR020625 Schiff base-forming aldolase, active site APS55_RS04355 IPR013785 Aldolase-type TIM barrel APS55_RS04355 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA APS55_RS04360 IPR036291 NAD(P)-binding domain superfamily APS55_RS04360 IPR023940 Dihydrodipicolinate reductase APS55_RS04360 IPR022664 Dihydrodipicolinate reductase, conserved site APS55_RS04360 IPR000846 Dihydrodipicolinate reductase, N-terminal APS55_RS04360 IPR022663 Dihydrodipicolinate reductase, C-terminal APS55_RS04365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS04365 IPR004839 Aminotransferase, class I/classII APS55_RS04365 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site APS55_RS04365 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS04365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS04370 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APS55_RS04370 IPR000534 Semialdehyde dehydrogenase, NAD-binding APS55_RS04370 IPR036291 NAD(P)-binding domain superfamily APS55_RS04370 IPR012080 Aspartate-semialdehyde dehydrogenase APS55_RS04370 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type APS55_RS04370 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site APS55_RS04375 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS04375 IPR002481 Ferric-uptake regulator APS55_RS04375 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS04385 IPR036589 Homocysteine-binding domain superfamily APS55_RS04385 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT APS55_RS04385 IPR003726 Homocysteine-binding domain APS55_RS04390 IPR004841 Amino acid permease/ SLC12A domain APS55_RS04390 IPR004840 Amino acid permease, conserved site APS55_RS04395 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily APS55_RS04395 IPR019405 Lactonase, 7-bladed beta propeller APS55_RS04395 IPR015943 WD40/YVTN repeat-like-containing domain superfamily APS55_RS04410 IPR003797 DegV APS55_RS04415 IPR000425 Major intrinsic protein APS55_RS04415 IPR023271 Aquaporin-like APS55_RS04415 IPR022357 Major intrinsic protein, conserved site APS55_RS04425 IPR036259 MFS transporter superfamily APS55_RS04425 IPR020846 Major facilitator superfamily domain APS55_RS04425 IPR011701 Major facilitator superfamily APS55_RS04425 IPR004638 Drug resistance transporter EmrB-like APS55_RS04435 IPR006042 Xanthine/uracil permease APS55_RS04435 IPR006043 Xanthine/uracil/vitamin C permease APS55_RS04435 IPR017588 Uric acid permease UacT-like APS55_RS04440 IPR040919 Asparaginase/glutaminase, C-terminal APS55_RS04440 IPR037152 L-asparaginase, N-terminal domain superfamily APS55_RS04440 IPR027474 L-asparaginase, N-terminal APS55_RS04440 IPR004550 L-asparaginase, type II APS55_RS04440 IPR036152 Asparaginase/glutaminase-like superfamily APS55_RS04440 IPR006034 Asparaginase/glutaminase-like APS55_RS04440 IPR027473 L-asparaginase, C-terminal APS55_RS04440 IPR027475 Asparaginase/glutaminase, active site 2 APS55_RS04440 IPR020827 Asparaginase/glutaminase, active site 1 APS55_RS04450 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04450 IPR003439 ABC transporter-like APS55_RS04450 IPR003593 AAA+ ATPase domain APS55_RS04450 IPR022501 Gallidermin ABC transporter, ATP-binding subunit APS55_RS04450 IPR017871 ABC transporter, conserved site APS55_RS04465 IPR036397 Ribonuclease H superfamily APS55_RS04465 IPR012337 Ribonuclease H-like superfamily APS55_RS04465 IPR038965 Transposase InsF-like APS55_RS04465 IPR001584 Integrase, catalytic core APS55_RS04485 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04485 IPR003439 ABC transporter-like APS55_RS04485 IPR017871 ABC transporter, conserved site APS55_RS04485 IPR003593 AAA+ ATPase domain APS55_RS04490 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted APS55_RS04495 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal APS55_RS04495 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A APS55_RS04495 IPR015956 Penicillin-binding protein, C-terminal domain superfamily APS55_RS04495 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS04495 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal APS55_RS04495 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily APS55_RS04505 IPR002293 Amino acid/polyamine transporter I APS55_RS04510 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS04510 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS04510 IPR000847 Transcription regulator HTH, LysR APS55_RS04510 IPR005119 LysR, substrate-binding APS55_RS04520 IPR036397 Ribonuclease H superfamily APS55_RS04520 IPR012337 Ribonuclease H-like superfamily APS55_RS04520 IPR025948 HTH-like domain APS55_RS04520 IPR038965 Transposase InsF-like APS55_RS04520 IPR001584 Integrase, catalytic core APS55_RS04545 IPR036291 NAD(P)-binding domain superfamily APS55_RS04545 IPR013328 6-phosphogluconate dehydrogenase, domain 2 APS55_RS04545 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily APS55_RS04545 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site APS55_RS04545 IPR015815 3-hydroxyisobutyrate dehydrogenase-related APS55_RS04545 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding APS55_RS04545 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain APS55_RS04550 IPR003593 AAA+ ATPase domain APS55_RS04550 IPR026253 Methionine import ATP-binding protein MetN APS55_RS04550 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APS55_RS04550 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APS55_RS04550 IPR018449 NIL domain APS55_RS04550 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04550 IPR017871 ABC transporter, conserved site APS55_RS04550 IPR003439 ABC transporter-like APS55_RS04555 IPR001851 ABC transporter, permease APS55_RS04565 IPR002293 Amino acid/polyamine transporter I APS55_RS04570 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS55_RS04570 IPR037523 Vicinal oxygen chelate (VOC) domain APS55_RS04570 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS55_RS04575 IPR017871 ABC transporter, conserved site APS55_RS04575 IPR032781 ABC-transporter extension domain APS55_RS04575 IPR003593 AAA+ ATPase domain APS55_RS04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04575 IPR003439 ABC transporter-like APS55_RS04585 IPR029058 Alpha/Beta hydrolase fold APS55_RS04585 IPR000073 Alpha/beta hydrolase fold-1 APS55_RS04585 IPR002410 Peptidase S33 APS55_RS04585 IPR005945 Proline-specific peptidase APS55_RS04590 IPR029058 Alpha/Beta hydrolase fold APS55_RS04590 IPR008979 Galactose-binding-like domain superfamily APS55_RS04590 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase APS55_RS04590 IPR036313 PepX, N-terminal domain superfamily APS55_RS04590 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain APS55_RS04590 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal APS55_RS04590 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain APS55_RS04595 IPR000086 NUDIX hydrolase domain APS55_RS04595 IPR020084 NUDIX hydrolase, conserved site APS55_RS04595 IPR015797 NUDIX hydrolase-like domain superfamily APS55_RS04595 IPR020476 NUDIX hydrolase APS55_RS04595 IPR036412 HAD-like superfamily APS55_RS04595 IPR006357 HAD-superfamily hydrolase, subfamily IIA APS55_RS04595 IPR023214 HAD superfamily APS55_RS04600 IPR008144 Guanylate kinase-like domain APS55_RS04600 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APS55_RS04600 IPR020590 Guanylate kinase, conserved site APS55_RS04600 IPR017665 Guanylate kinase APS55_RS04600 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04615 IPR032305 GTP-binding protein, middle domain APS55_RS04615 IPR030394 HflX-type guanine nucleotide-binding (G) domain APS55_RS04615 IPR006073 GTP binding domain APS55_RS04615 IPR016496 GTPase HflX APS55_RS04615 IPR042108 GTPase HflX, N-terminal domain superfamily APS55_RS04615 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04615 IPR025121 GTPase HflX, N-terminal APS55_RS04620 IPR000914 Solute-binding protein family 5 domain APS55_RS04620 IPR023765 Solute-binding protein family 5, conserved site APS55_RS04620 IPR039424 Solute-binding protein family 5 APS55_RS04620 IPR030678 Peptide/nickel binding protein, MppA-type APS55_RS04625 IPR035906 MetI-like superfamily APS55_RS04625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS04630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS04630 IPR035906 MetI-like superfamily APS55_RS04630 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APS55_RS04635 IPR003593 AAA+ ATPase domain APS55_RS04635 IPR003439 ABC transporter-like APS55_RS04635 IPR017871 ABC transporter, conserved site APS55_RS04635 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APS55_RS04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04640 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04640 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal APS55_RS04640 IPR017871 ABC transporter, conserved site APS55_RS04640 IPR003439 ABC transporter-like APS55_RS04640 IPR003593 AAA+ ATPase domain APS55_RS04645 IPR013078 Histidine phosphatase superfamily, clade-1 APS55_RS04645 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site APS55_RS04645 IPR029033 Histidine phosphatase superfamily APS55_RS04645 IPR023086 Phosphoglycerate mutase, GpmB, probable APS55_RS04650 IPR027785 UvrD-like helicase C-terminal domain APS55_RS04650 IPR014016 UvrD-like helicase, ATP-binding domain APS55_RS04650 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04650 IPR000212 DNA helicase, UvrD/REP type APS55_RS04655 IPR004566 Pantothenate kinase APS55_RS04655 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04655 IPR006083 Phosphoribulokinase/uridine kinase APS55_RS04660 IPR017926 Glutamine amidotransferase APS55_RS04660 IPR022310 NAD/GMP synthase APS55_RS04660 IPR025777 GMP synthetase ATP pyrophosphatase domain APS55_RS04660 IPR022955 GMP synthase APS55_RS04660 IPR004739 GMP synthase, glutamine amidotransferase APS55_RS04660 IPR001674 GMP synthase, C-terminal APS55_RS04660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS04660 IPR029062 Class I glutamine amidotransferase-like APS55_RS04665 IPR016163 Aldehyde dehydrogenase, C-terminal APS55_RS04665 IPR016161 Aldehyde/histidinol dehydrogenase APS55_RS04665 IPR000965 GPR domain APS55_RS04665 IPR012134 Glutamate-5-semialdehyde dehydrogenase APS55_RS04665 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site APS55_RS04665 IPR015590 Aldehyde dehydrogenase domain APS55_RS04665 IPR016162 Aldehyde dehydrogenase, N-terminal APS55_RS04670 IPR011529 Glutamate 5-kinase APS55_RS04670 IPR001057 Glutamate/acetylglutamate kinase APS55_RS04670 IPR001048 Aspartate/glutamate/uridylate kinase APS55_RS04670 IPR019797 Glutamate 5-kinase, conserved site APS55_RS04670 IPR036393 Acetylglutamate kinase-like superfamily APS55_RS04670 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase APS55_RS04670 IPR041739 Glutamate-5-kinase domain APS55_RS04675 IPR000620 EamA domain APS55_RS04680 IPR011032 GroES-like superfamily APS55_RS04680 IPR013149 Alcohol dehydrogenase, C-terminal APS55_RS04680 IPR013154 Alcohol dehydrogenase, N-terminal APS55_RS04680 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site APS55_RS04680 IPR036291 NAD(P)-binding domain superfamily APS55_RS04680 IPR020843 Polyketide synthase, enoylreductase domain APS55_RS04685 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04685 IPR017871 ABC transporter, conserved site APS55_RS04685 IPR003439 ABC transporter-like APS55_RS04685 IPR003593 AAA+ ATPase domain APS55_RS04690 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS04690 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily APS55_RS04690 IPR036280 Multiheme cytochrome superfamily APS55_RS04690 IPR012286 Tetrahaem cytochrome domain APS55_RS04690 IPR010960 Flavocytochrome c APS55_RS04690 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APS55_RS04690 IPR011031 Multihaem cytochrome APS55_RS04700 IPR036398 Alpha carbonic anhydrase domain superfamily APS55_RS04700 IPR023561 Carbonic anhydrase, alpha-class APS55_RS04700 IPR018338 Carbonic anhydrase, alpha-class, conserved site APS55_RS04700 IPR041891 Carbonic anhydrase, prokaryotic-like APS55_RS04700 IPR001148 Alpha carbonic anhydrase domain APS55_RS04705 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site APS55_RS04705 IPR006225 Pseudouridine synthase, RluC/RluD APS55_RS04705 IPR006145 Pseudouridine synthase, RsuA/RluA APS55_RS04705 IPR002942 RNA-binding S4 domain APS55_RS04705 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS04725 IPR023500 Zinc transporter ZitB APS55_RS04725 IPR036837 Cation efflux protein, cytoplasmic domain superfamily APS55_RS04725 IPR002524 Cation efflux protein APS55_RS04725 IPR027469 Cation efflux transmembrane domain superfamily APS55_RS04755 IPR002781 Transmembrane protein TauE-like APS55_RS04775 IPR004841 Amino acid permease/ SLC12A domain APS55_RS04780 IPR002624 Deoxynucleoside kinase APS55_RS04780 IPR031314 Deoxynucleoside kinase domain APS55_RS04780 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04785 IPR033729 Serine-tRNA ligase catalytic core domain APS55_RS04785 IPR015866 Serine-tRNA synthetase, type1, N-terminal APS55_RS04785 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APS55_RS04785 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS04785 IPR002317 Serine-tRNA ligase, type1 APS55_RS04785 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APS55_RS04785 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily APS55_RS04830 IPR041902 CtsR, N-terminal domain superfamily APS55_RS04830 IPR041908 CtsR, C-terminal domain superfamily APS55_RS04830 IPR040465 CtsR, N-terminal HTH domain APS55_RS04830 IPR008463 Transcriptional regulator CtsR APS55_RS04830 IPR041473 CtsR, C-terminal dimerization domain APS55_RS04835 IPR028299 ClpA/B, conserved site 2 APS55_RS04835 IPR041546 ClpA/ClpB, AAA lid domain APS55_RS04835 IPR003593 AAA+ ATPase domain APS55_RS04835 IPR003959 ATPase, AAA-type, core APS55_RS04835 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04835 IPR036628 Clp, N-terminal domain superfamily APS55_RS04835 IPR004176 Clp, N-terminal APS55_RS04835 IPR018368 ClpA/B, conserved site 1 APS55_RS04835 IPR001270 ClpA/B family APS55_RS04835 IPR001943 UVR domain APS55_RS04835 IPR019489 Clp ATPase, C-terminal APS55_RS04840 IPR007121 RNA polymerase, beta subunit, conserved site APS55_RS04840 IPR007644 RNA polymerase, beta subunit, protrusion APS55_RS04840 IPR007642 RNA polymerase Rpb2, domain 2 APS55_RS04840 IPR037034 RNA polymerase Rpb2, domain 2 superfamily APS55_RS04840 IPR007645 RNA polymerase Rpb2, domain 3 APS55_RS04840 IPR007641 RNA polymerase Rpb2, domain 7 APS55_RS04840 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type APS55_RS04840 IPR014724 RNA polymerase Rpb2, OB-fold APS55_RS04840 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain APS55_RS04840 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily APS55_RS04840 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain APS55_RS04840 IPR015712 DNA-directed RNA polymerase, subunit 2 APS55_RS04845 IPR038120 RNA polymerase Rpb1, funnel domain superfamily APS55_RS04845 IPR007080 RNA polymerase Rpb1, domain 1 APS55_RS04845 IPR006592 RNA polymerase, N-terminal APS55_RS04845 IPR000722 RNA polymerase, alpha subunit APS55_RS04845 IPR007083 RNA polymerase Rpb1, domain 4 APS55_RS04845 IPR007066 RNA polymerase Rpb1, domain 3 APS55_RS04845 IPR042102 RNA polymerase Rpb1, domain 3 superfamily APS55_RS04845 IPR012754 DNA-directed RNA polymerase, subunit beta-prime APS55_RS04845 IPR007081 RNA polymerase Rpb1, domain 5 APS55_RS04855 IPR005679 Ribosomal protein S12, bacterial-type APS55_RS04855 IPR012340 Nucleic acid-binding, OB-fold APS55_RS04855 IPR006032 Ribosomal protein S12/S23 APS55_RS04860 IPR036823 Ribosomal protein S7 domain superfamily APS55_RS04860 IPR020606 Ribosomal protein S7, conserved site APS55_RS04860 IPR005717 Ribosomal protein S7, bacterial/organellar-type APS55_RS04860 IPR000235 Ribosomal protein S5/S7 APS55_RS04860 IPR023798 Ribosomal protein S7 domain APS55_RS04865 IPR005517 Translation elongation factor EFG/EF2, domain IV APS55_RS04865 IPR004161 Translation elongation factor EFTu-like, domain 2 APS55_RS04865 IPR005225 Small GTP-binding protein domain APS55_RS04865 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04865 IPR031157 Tr-type G domain, conserved site APS55_RS04865 IPR000795 Transcription factor, GTP-binding domain APS55_RS04865 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS04865 IPR004540 Translation elongation factor EFG/EF2 APS55_RS04865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS04865 IPR035649 EFG, domain V APS55_RS04865 IPR035647 EF-G domain III/V-like APS55_RS04865 IPR000640 Elongation factor EFG, domain V-like APS55_RS04865 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS04865 IPR041095 Elongation Factor G, domain II APS55_RS04865 IPR009022 Elongation factor G, domain III APS55_RS04870 IPR001848 Ribosomal protein S10 APS55_RS04870 IPR018268 Ribosomal protein S10, conserved site APS55_RS04870 IPR027486 Ribosomal protein S10 domain APS55_RS04870 IPR036838 Ribosomal protein S10 domain superfamily APS55_RS04875 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS04875 IPR019927 Ribosomal protein L3, bacterial/organelle-type APS55_RS04875 IPR000597 Ribosomal protein L3 APS55_RS04880 IPR002136 Ribosomal protein L4/L1e APS55_RS04880 IPR023574 Ribosomal protein L4 domain superfamily APS55_RS04880 IPR013005 50S ribosomal protein uL4 APS55_RS04885 IPR012678 Ribosomal protein L23/L15e core domain superfamily APS55_RS04885 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily APS55_RS04885 IPR013025 Ribosomal protein L25/L23 APS55_RS04890 IPR012340 Nucleic acid-binding, OB-fold APS55_RS04890 IPR002171 Ribosomal protein L2 APS55_RS04890 IPR014726 Ribosomal protein L2, domain 3 APS55_RS04890 IPR022669 Ribosomal protein L2, C-terminal APS55_RS04890 IPR005880 Ribosomal protein L2, bacterial/organellar-type APS55_RS04890 IPR014722 Ribosomal protein L2, domain 2 APS55_RS04890 IPR022666 Ribosomal Proteins L2, RNA binding domain APS55_RS04890 IPR008991 Translation protein SH3-like domain superfamily APS55_RS04890 IPR022671 Ribosomal protein L2, conserved site APS55_RS04895 IPR023575 Ribosomal protein S19, superfamily APS55_RS04895 IPR020934 Ribosomal protein S19 conserved site APS55_RS04895 IPR005732 Ribosomal protein S19, bacterial-type APS55_RS04895 IPR002222 Ribosomal protein S19/S15 APS55_RS04900 IPR018260 Ribosomal protein L22/L17, conserved site APS55_RS04900 IPR036394 Ribosomal protein L22/L17 superfamily APS55_RS04900 IPR001063 Ribosomal protein L22/L17 APS55_RS04900 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type APS55_RS04905 IPR001351 Ribosomal protein S3, C-terminal APS55_RS04905 IPR036419 Ribosomal protein S3, C-terminal domain superfamily APS55_RS04905 IPR015946 K homology domain-like, alpha/beta APS55_RS04905 IPR004087 K Homology domain APS55_RS04905 IPR005704 Ribosomal protein S3, bacterial-type APS55_RS04905 IPR009019 K homology domain superfamily, prokaryotic type APS55_RS04905 IPR018280 Ribosomal protein S3, conserved site APS55_RS04905 IPR004044 K Homology domain, type 2 APS55_RS04910 IPR036920 Ribosomal protein L10e/L16 superfamily APS55_RS04910 IPR000114 Ribosomal protein L16 APS55_RS04910 IPR020798 Ribosomal protein L16, conserved site APS55_RS04910 IPR016180 Ribosomal protein L10e/L16 APS55_RS04915 IPR018254 Ribosomal protein L29, conserved site APS55_RS04915 IPR036049 Ribosomal protein L29/L35 superfamily APS55_RS04915 IPR001854 Ribosomal protein L29/L35 APS55_RS04920 IPR012340 Nucleic acid-binding, OB-fold APS55_RS04920 IPR019979 Ribosomal protein S17, conserved site APS55_RS04920 IPR000266 Ribosomal protein S17/S11 APS55_RS04920 IPR019984 30S ribosomal protein S17 APS55_RS04925 IPR036853 Ribosomal protein L14 superfamily APS55_RS04925 IPR005745 Ribosomal protein L14P, bacterial-type APS55_RS04925 IPR019972 Ribosomal protein L14P, conserved site APS55_RS04925 IPR000218 Ribosomal protein L14P APS55_RS04930 IPR008991 Translation protein SH3-like domain superfamily APS55_RS04930 IPR003256 Ribosomal protein L24 APS55_RS04930 IPR014722 Ribosomal protein L2, domain 2 APS55_RS04930 IPR041988 Ribosomal Protein L26/L24, KOW domain APS55_RS04930 IPR005824 KOW APS55_RS04930 IPR005825 Ribosomal protein L24/L26, conserved site APS55_RS04935 IPR002132 Ribosomal protein L5 APS55_RS04935 IPR020930 Ribosomal protein L5, bacterial-type APS55_RS04935 IPR031309 Ribosomal protein L5, C-terminal APS55_RS04935 IPR020929 Ribosomal protein L5, conserved site APS55_RS04935 IPR022803 Ribosomal protein L5 domain superfamily APS55_RS04935 IPR031310 Ribosomal protein L5, N-terminal APS55_RS04940 IPR018271 Ribosomal protein S14, conserved site APS55_RS04940 IPR001209 Ribosomal protein S14 APS55_RS04940 IPR023053 Ribosomal protein S14, type Z APS55_RS04945 IPR000630 Ribosomal protein S8 APS55_RS04945 IPR035987 Ribosomal protein S8 superfamily APS55_RS04950 IPR019906 Ribosomal protein L6, bacterial-type APS55_RS04950 IPR020040 Ribosomal protein L6, alpha-beta domain APS55_RS04950 IPR000702 Ribosomal protein L6 APS55_RS04950 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily APS55_RS04950 IPR002358 Ribosomal protein L6, conserved site APS55_RS04955 IPR005484 Ribosomal protein L18 APS55_RS04955 IPR004389 Ribosomal protein L18, bacterial-type APS55_RS04960 IPR005712 Ribosomal protein S5, bacterial-type APS55_RS04960 IPR018192 Ribosomal protein S5, N-terminal, conserved site APS55_RS04960 IPR005324 Ribosomal protein S5, C-terminal APS55_RS04960 IPR000851 Ribosomal protein S5 APS55_RS04960 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS04960 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS04960 IPR013810 Ribosomal protein S5, N-terminal APS55_RS04965 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily APS55_RS04965 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APS55_RS04965 IPR005996 Ribosomal protein L30, bacterial-type APS55_RS04970 IPR036227 Ribosomal L18e/L15P superfamily APS55_RS04970 IPR021131 Ribosomal protein L18e/L15P APS55_RS04970 IPR005749 Ribosomal protein L15, bacterial-type APS55_RS04970 IPR030878 Ribosomal protein L15 APS55_RS04970 IPR001196 Ribosomal protein L15, conserved site APS55_RS04975 IPR030659 SecY conserved site APS55_RS04975 IPR026593 Protein translocase subunit SecY APS55_RS04975 IPR023201 SecY domain superfamily APS55_RS04975 IPR002208 SecY/SEC61-alpha family APS55_RS04980 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS04980 IPR007862 Adenylate kinase, active site lid domain APS55_RS04980 IPR033690 Adenylate kinase, conserved site APS55_RS04980 IPR006259 Adenylate kinase subfamily APS55_RS04980 IPR000850 Adenylate kinase/UMP-CMP kinase APS55_RS04985 IPR012340 Nucleic acid-binding, OB-fold APS55_RS04985 IPR006196 RNA-binding domain, S1, IF1 type APS55_RS04985 IPR022967 RNA-binding domain, S1 APS55_RS04985 IPR004368 Translation initiation factor IF-1 APS55_RS04990 IPR000473 Ribosomal protein L36 APS55_RS04990 IPR035977 Ribosomal protein L36 superfamily APS55_RS04995 IPR019980 Ribosomal protein S13, bacterial-type APS55_RS04995 IPR010979 Ribosomal protein S13-like, H2TH APS55_RS04995 IPR001892 Ribosomal protein S13 APS55_RS04995 IPR027437 30s ribosomal protein S13, C-terminal APS55_RS04995 IPR018269 Ribosomal protein S13, conserved site APS55_RS05000 IPR019981 Ribosomal protein S11, bacterial-type APS55_RS05000 IPR001971 Ribosomal protein S11 APS55_RS05000 IPR018102 Ribosomal S11, conserved site APS55_RS05000 IPR036967 Ribosomal protein S11 superfamily APS55_RS05005 IPR036643 DNA-directed RNA polymerase, insert domain superfamily APS55_RS05005 IPR011260 RNA polymerase, alpha subunit, C-terminal APS55_RS05005 IPR036603 RNA polymerase, RBP11-like subunit APS55_RS05005 IPR011773 DNA-directed RNA polymerase, alpha subunit APS55_RS05005 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type APS55_RS05005 IPR011262 DNA-directed RNA polymerase, insert domain APS55_RS05010 IPR036373 Ribosomal protein L17 superfamily APS55_RS05010 IPR000456 Ribosomal protein L17 APS55_RS05015 IPR015856 ABC transporter, CbiO/EcfA subunit APS55_RS05015 IPR003439 ABC transporter-like APS55_RS05015 IPR003593 AAA+ ATPase domain APS55_RS05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05015 IPR017871 ABC transporter, conserved site APS55_RS05015 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 APS55_RS05020 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05020 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 APS55_RS05020 IPR015856 ABC transporter, CbiO/EcfA subunit APS55_RS05020 IPR003593 AAA+ ATPase domain APS55_RS05020 IPR003439 ABC transporter-like APS55_RS05020 IPR017871 ABC transporter, conserved site APS55_RS05025 IPR003339 ABC/ECF transporter, transmembrane component APS55_RS05025 IPR024919 ECF transporter transmembrane protein EcfT APS55_RS05030 IPR001406 Pseudouridine synthase I, TruA APS55_RS05030 IPR020095 Pseudouridine synthase I, TruA, C-terminal APS55_RS05030 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS05030 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain APS55_RS05035 IPR005822 Ribosomal protein L13 APS55_RS05035 IPR005823 Ribosomal protein L13, bacterial-type APS55_RS05035 IPR036899 Ribosomal protein L13 superfamily APS55_RS05040 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS05040 IPR023035 Ribosomal protein S9, bacterial/plastid APS55_RS05040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS05040 IPR000754 Ribosomal protein S9 APS55_RS05040 IPR020574 Ribosomal protein S9, conserved site APS55_RS05045 IPR024529 ECF transporter, substrate-specific component APS55_RS05055 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain APS55_RS05055 IPR038200 GW domain superfamily APS55_RS05055 IPR025987 GW domain APS55_RS05060 IPR000836 Phosphoribosyltransferase domain APS55_RS05060 IPR010079 Xanthine phosphoribosyltransferase APS55_RS05060 IPR029057 Phosphoribosyltransferase-like APS55_RS05065 IPR013986 DExx box DNA helicase domain superfamily APS55_RS05065 IPR005751 ATP-dependent DNA helicase PcrA APS55_RS05065 IPR034739 UvrD/AddA helicase, N-terminal APS55_RS05065 IPR014016 UvrD-like helicase, ATP-binding domain APS55_RS05065 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05065 IPR000212 DNA helicase, UvrD/REP type APS55_RS05065 IPR014017 UvrD-like DNA helicase, C-terminal APS55_RS05070 IPR012340 Nucleic acid-binding, OB-fold APS55_RS05070 IPR013840 NAD-dependent DNA ligase, N-terminal APS55_RS05070 IPR013839 NAD-dependent DNA ligase, adenylation APS55_RS05070 IPR010994 RuvA domain 2-like APS55_RS05070 IPR001679 NAD-dependent DNA ligase APS55_RS05070 IPR018239 NAD-dependent DNA ligase, active site APS55_RS05070 IPR036420 BRCT domain superfamily APS55_RS05070 IPR004150 NAD-dependent DNA ligase, OB-fold APS55_RS05070 IPR033136 NAD-dependent DNA ligase, conserved site APS55_RS05070 IPR001357 BRCT domain APS55_RS05070 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type APS55_RS05070 IPR041663 DisA/LigA, helix-hairpin-helix motif APS55_RS05075 IPR011426 CamS sex pheromone cAM373 APS55_RS05080 IPR003837 Glu-tRNAGln amidotransferase C subunit APS55_RS05080 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C APS55_RS05085 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit APS55_RS05085 IPR000120 Amidase APS55_RS05085 IPR036928 Amidase signature (AS) superfamily APS55_RS05085 IPR020556 Amidase, conserved site APS55_RS05085 IPR023631 Amidase signature domain APS55_RS05090 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APS55_RS05090 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic APS55_RS05090 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E APS55_RS05090 IPR018027 Asn/Gln amidotransferase APS55_RS05090 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like APS55_RS05090 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 APS55_RS05090 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 APS55_RS05090 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit APS55_RS05090 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site APS55_RS05095 IPR001206 Diacylglycerol kinase, catalytic domain APS55_RS05095 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APS55_RS05095 IPR005218 Diacylglycerol/lipid kinase APS55_RS05095 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal APS55_RS05100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05100 IPR012340 Nucleic acid-binding, OB-fold APS55_RS05100 IPR030391 RNA methyltransferase TrmA, conserved site APS55_RS05100 IPR030390 RNA methyltransferase TrmA, active site APS55_RS05100 IPR010280 (Uracil-5)-methyltransferase family APS55_RS05100 IPR002792 TRAM domain APS55_RS05105 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APS55_RS05105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05105 IPR002941 DNA methylase N-4/N-6 APS55_RS05105 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class APS55_RS05105 IPR041405 Type III R-M EcoP15I, C-terminal APS55_RS05110 IPR014883 VRR-NUC domain APS55_RS05110 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05110 IPR006935 Helicase/UvrB, N-terminal APS55_RS05135 IPR002293 Amino acid/polyamine transporter I APS55_RS05140 IPR000577 Carbohydrate kinase, FGGY APS55_RS05140 IPR018485 Carbohydrate kinase, FGGY, C-terminal APS55_RS05140 IPR018483 Carbohydrate kinase, FGGY, conserved site APS55_RS05140 IPR018484 Carbohydrate kinase, FGGY, N-terminal APS55_RS05140 IPR006002 Gluconate kinase APS55_RS05145 IPR002477 Peptidoglycan binding-like APS55_RS05145 IPR036365 PGBD-like superfamily APS55_RS05145 IPR002053 Glycoside hydrolase, family 25 APS55_RS05145 IPR008270 Glycoside hydrolase, family 25, active site APS55_RS05145 IPR018077 Glycoside hydrolase, family 25 subgroup APS55_RS05145 IPR036366 PGBD superfamily APS55_RS05145 IPR017853 Glycoside hydrolase superfamily APS55_RS05150 IPR014014 RNA helicase, DEAD-box type, Q motif APS55_RS05150 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05150 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS05150 IPR011545 DEAD/DEAH box helicase domain APS55_RS05150 IPR001650 Helicase, C-terminal APS55_RS05160 IPR024370 PBP domain APS55_RS05160 IPR011862 Phosphate binding protein APS55_RS05165 IPR011862 Phosphate binding protein APS55_RS05165 IPR024370 PBP domain APS55_RS05170 IPR011864 Phosphate ABC transporter, permease protein PstC APS55_RS05170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS05170 IPR035906 MetI-like superfamily APS55_RS05175 IPR005672 Phosphate transport system permease protein PstA APS55_RS05175 IPR035906 MetI-like superfamily APS55_RS05175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS05180 IPR003593 AAA+ ATPase domain APS55_RS05180 IPR003439 ABC transporter-like APS55_RS05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05180 IPR017871 ABC transporter, conserved site APS55_RS05180 IPR005670 Phosphate transport system permease protein 1 APS55_RS05180 IPR015850 ABC transporter, phosphate import, PstB APS55_RS05185 IPR015850 ABC transporter, phosphate import, PstB APS55_RS05185 IPR003593 AAA+ ATPase domain APS55_RS05185 IPR003439 ABC transporter-like APS55_RS05185 IPR017871 ABC transporter, conserved site APS55_RS05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05185 IPR005670 Phosphate transport system permease protein 1 APS55_RS05190 IPR026022 PhoU domain APS55_RS05190 IPR038078 PhoU-like domain superfamily APS55_RS05190 IPR028366 Phosphate transport system protein PhoU APS55_RS05195 IPR016032 Signal transduction response regulator, C-terminal effector APS55_RS05195 IPR001789 Signal transduction response regulator, receiver domain APS55_RS05195 IPR011006 CheY-like superfamily APS55_RS05195 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS05195 IPR001867 OmpR/PhoB-type DNA-binding domain APS55_RS05195 IPR039420 Transcriptional regulatory protein WalR-like APS55_RS05200 IPR010651 Sugar transport protein APS55_RS05205 IPR003474 Gluconate transporter APS55_RS05210 IPR007267 GtrA-like protein APS55_RS05215 IPR001173 Glycosyltransferase 2-like APS55_RS05215 IPR029044 Nucleotide-diphospho-sugar transferases APS55_RS05220 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APS55_RS05220 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like APS55_RS05225 IPR017039 Virulence factor BrkB APS55_RS05230 IPR010087 Flavodoxin, short chain APS55_RS05230 IPR029039 Flavoprotein-like superfamily APS55_RS05230 IPR001226 Flavodoxin, conserved site APS55_RS05230 IPR008254 Flavodoxin/nitric oxide synthase APS55_RS05230 IPR001094 Flavodoxin-like APS55_RS05235 IPR003783 Regulatory protein RecX APS55_RS05235 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS05240 IPR002549 Transmembrane protein TqsA-like APS55_RS05245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS05245 IPR004821 Cytidyltransferase-like domain APS55_RS05245 IPR006409 Glycerol-3-phosphate cytidylyltransferase APS55_RS05250 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS05250 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily APS55_RS05250 IPR031157 Tr-type G domain, conserved site APS55_RS05250 IPR004161 Translation elongation factor EFTu-like, domain 2 APS55_RS05250 IPR035647 EF-G domain III/V-like APS55_RS05250 IPR004548 Peptide chain release factor 3 APS55_RS05250 IPR032090 Peptide chain release factor 3, C-terminal APS55_RS05250 IPR041732 Peptide chain release factor 3, GTP-binding domain APS55_RS05250 IPR005225 Small GTP-binding protein domain APS55_RS05250 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05250 IPR000795 Transcription factor, GTP-binding domain APS55_RS05260 IPR018368 ClpA/B, conserved site 1 APS55_RS05260 IPR036876 UVR domain superfamily APS55_RS05260 IPR028299 ClpA/B, conserved site 2 APS55_RS05260 IPR041546 ClpA/ClpB, AAA lid domain APS55_RS05260 IPR003593 AAA+ ATPase domain APS55_RS05260 IPR003959 ATPase, AAA-type, core APS55_RS05260 IPR001943 UVR domain APS55_RS05260 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05260 IPR001270 ClpA/B family APS55_RS05260 IPR019489 Clp ATPase, C-terminal APS55_RS05265 IPR000032 Phosphocarrier protein HPr-like APS55_RS05265 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APS55_RS05265 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APS55_RS05265 IPR035895 HPr-like superfamily APS55_RS05270 IPR001296 Glycosyl transferase, family 1 APS55_RS05270 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS55_RS05275 IPR001296 Glycosyl transferase, family 1 APS55_RS05275 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS55_RS05285 IPR012160 Lipoteichoic acid synthase-like APS55_RS05285 IPR000917 Sulfatase, N-terminal APS55_RS05285 IPR017850 Alkaline-phosphatase-like, core domain superfamily APS55_RS05420 IPR014071 Copper transport repressor CopY/TcrY APS55_RS05420 IPR005650 BlaI transcriptional regulatory family APS55_RS05420 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS05420 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS05425 IPR036412 HAD-like superfamily APS55_RS05425 IPR023214 HAD superfamily APS55_RS05425 IPR027256 P-type ATPase, subfamily IB APS55_RS05425 IPR001757 P-type ATPase APS55_RS05425 IPR023299 P-type ATPase, cytoplasmic domain N APS55_RS05425 IPR018303 P-type ATPase, phosphorylation site APS55_RS05425 IPR008250 P-type ATPase, A domain superfamily APS55_RS05425 IPR023298 P-type ATPase, transmembrane domain superfamily APS55_RS05435 IPR001279 Metallo-beta-lactamase APS55_RS05435 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APS55_RS05440 IPR038471 MecA, C-terminal domain superfamily APS55_RS05440 IPR008681 Negative regulator of genetic competence, MecA APS55_RS05450 IPR013647 Oligopeptidase F, N-terminal domain APS55_RS05450 IPR042088 Oligoendopeptidase F, C-terminal domain APS55_RS05450 IPR001567 Peptidase M3A/M3B catalytic domain APS55_RS05450 IPR004438 Peptidase M3B, oligoendopeptidase F APS55_RS05460 IPR007685 RelA/SpoT APS55_RS05465 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal APS55_RS05465 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APS55_RS05465 IPR002504 NAD kinase APS55_RS05465 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal APS55_RS05470 IPR006225 Pseudouridine synthase, RluC/RluD APS55_RS05470 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site APS55_RS05470 IPR006145 Pseudouridine synthase, RsuA/RluA APS55_RS05470 IPR002942 RNA-binding S4 domain APS55_RS05470 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS05475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05475 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted APS55_RS05475 IPR013216 Methyltransferase type 11 APS55_RS05480 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase APS55_RS05480 IPR029028 Alpha/beta knot methyltransferases APS55_RS05480 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS55_RS05480 IPR001537 tRNA/rRNA methyltransferase, SpoU type APS55_RS05485 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS05485 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS05485 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05485 IPR018541 FtsK gamma domain APS55_RS05485 IPR002543 FtsK domain APS55_RS05485 IPR041027 FtsK alpha domain APS55_RS05485 IPR003593 AAA+ ATPase domain APS55_RS05490 IPR003444 Transcriptional regulator MraZ APS55_RS05490 IPR035644 MraZ, C-terminal APS55_RS05490 IPR020603 MraZ domain APS55_RS05490 IPR035642 MraZ, N-terminal APS55_RS05490 IPR038619 MraZ superfamily APS55_RS05490 IPR007159 SpoVT-AbrB domain APS55_RS05490 IPR037914 SpoVT-AbrB domain superfamily APS55_RS05495 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily APS55_RS05495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05495 IPR002903 Ribosomal RNA small subunit methyltransferase H APS55_RS05505 IPR001460 Penicillin-binding protein, transpeptidase APS55_RS05505 IPR036138 Penicillin-binding protein, dimerisation domain superfamily APS55_RS05505 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS05505 IPR005543 PASTA domain APS55_RS05505 IPR005311 Penicillin-binding protein, dimerisation domain APS55_RS05510 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site APS55_RS05510 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase APS55_RS05510 IPR000715 Glycosyl transferase, family 4 APS55_RS05515 IPR036565 Mur-like, catalytic domain superfamily APS55_RS05515 IPR018109 Folylpolyglutamate synthetase, conserved site APS55_RS05515 IPR013221 Mur ligase, central APS55_RS05515 IPR036615 Mur ligase, C-terminal domain superfamily APS55_RS05515 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase APS55_RS05515 IPR004101 Mur ligase, C-terminal APS55_RS05515 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APS55_RS05520 IPR004276 Glycosyltransferase family 28, N-terminal domain APS55_RS05520 IPR007235 Glycosyl transferase, family 28, C-terminal APS55_RS05520 IPR006009 N-acetylglucosaminyltransferase, MurG APS55_RS05525 IPR026580 Cell division protein DivIB APS55_RS05525 IPR013685 POTRA domain, FtsQ-type APS55_RS05525 IPR034746 POTRA domain APS55_RS05525 IPR005548 Cell division protein FtsQ/DivIB APS55_RS05530 IPR021873 Cell division protein FtsA, C-terminal APS55_RS05530 IPR003494 SHS2 domain inserted in FtsA APS55_RS05530 IPR020823 Cell division protein FtsA APS55_RS05535 IPR020805 Cell division protein FtsZ, conserved site APS55_RS05535 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APS55_RS05535 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily APS55_RS05535 IPR000158 Cell division protein FtsZ APS55_RS05535 IPR008280 Tubulin/FtsZ, C-terminal APS55_RS05535 IPR036525 Tubulin/FtsZ, GTPase domain superfamily APS55_RS05535 IPR003008 Tubulin/FtsZ, GTPase domain APS55_RS05535 IPR024757 Cell division protein FtsZ, C-terminal APS55_RS05540 IPR038594 SepF-like superfamily APS55_RS05540 IPR023052 Cell division protein SepF APS55_RS05540 IPR007561 Cell division protein SepF/SepF-related APS55_RS05550 IPR007793 DivIVA family APS55_RS05550 IPR019933 DivIVA domain APS55_RS05555 IPR023585 Isoleucine-tRNA ligase, type 1 APS55_RS05555 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APS55_RS05555 IPR002301 Isoleucine-tRNA ligase APS55_RS05555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS05555 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APS55_RS05555 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APS55_RS05555 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain APS55_RS05555 IPR002300 Aminoacyl-tRNA synthetase, class Ia APS55_RS05555 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS05555 IPR010663 Zinc finger, FPG/IleRS-type APS55_RS05560 IPR012156 Cold shock, CspA APS55_RS05560 IPR012340 Nucleic acid-binding, OB-fold APS55_RS05560 IPR002059 Cold-shock protein, DNA-binding APS55_RS05560 IPR019844 Cold-shock (CSD) domain APS55_RS05560 IPR011129 Cold shock domain APS55_RS05565 IPR020084 NUDIX hydrolase, conserved site APS55_RS05565 IPR000086 NUDIX hydrolase domain APS55_RS05565 IPR020476 NUDIX hydrolase APS55_RS05565 IPR015797 NUDIX hydrolase-like domain superfamily APS55_RS05575 IPR010049 MTA/SAH nucleosidase APS55_RS05575 IPR000845 Nucleoside phosphorylase domain APS55_RS05575 IPR035994 Nucleoside phosphorylase superfamily APS55_RS05580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS05580 IPR000192 Aminotransferase class V domain APS55_RS05580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS05580 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS05580 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APS55_RS05580 IPR016454 Cysteine desulfurase APS55_RS05590 IPR004506 tRNA-specific 2-thiouridylase APS55_RS05590 IPR023382 Adenine nucleotide alpha hydrolase-like domains APS55_RS05590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS05605 IPR003593 AAA+ ATPase domain APS55_RS05605 IPR027785 UvrD-like helicase C-terminal domain APS55_RS05605 IPR041451 RecD-like DNA helicase, SH3 domain APS55_RS05605 IPR029493 RecD helicase-like helix-hairpin-helix domain APS55_RS05605 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05605 IPR006345 RecD-like DNA helicase APS55_RS05610 IPR029057 Phosphoribosyltransferase-like APS55_RS05610 IPR005946 Ribose-phosphate pyrophosphokinase APS55_RS05610 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type APS55_RS05610 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain APS55_RS05610 IPR000836 Phosphoribosyltransferase domain APS55_RS05610 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site APS55_RS05615 IPR036812 NADP-dependent oxidoreductase domain superfamily APS55_RS05615 IPR023210 NADP-dependent oxidoreductase domain APS55_RS05620 IPR004754 Amino acid antiporter APS55_RS05620 IPR022461 Arginine/ornithine antiporter APS55_RS05620 IPR002293 Amino acid/polyamine transporter I APS55_RS05625 IPR001206 Diacylglycerol kinase, catalytic domain APS55_RS05625 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APS55_RS05625 IPR005218 Diacylglycerol/lipid kinase APS55_RS05625 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal APS55_RS05630 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APS55_RS05630 IPR030854 Ribonuclease J, bacteria APS55_RS05630 IPR001587 Ribonuclease J, conserved site APS55_RS05630 IPR001279 Metallo-beta-lactamase APS55_RS05630 IPR041636 Ribonuclease J, C-terminal APS55_RS05630 IPR004613 Ribonuclease J APS55_RS05630 IPR042173 Ribonuclease J, domain 2 APS55_RS05630 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APS55_RS05635 IPR009907 Protein of unknown function DUF1447 APS55_RS05645 IPR036821 Peptide deformylase superfamily APS55_RS05645 IPR023635 Peptide deformylase APS55_RS05650 IPR011304 L-lactate dehydrogenase APS55_RS05650 IPR001557 L-lactate/malate dehydrogenase APS55_RS05650 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal APS55_RS05650 IPR018177 L-lactate dehydrogenase, active site APS55_RS05650 IPR022383 Lactate/malate dehydrogenase, C-terminal APS55_RS05650 IPR001236 Lactate/malate dehydrogenase, N-terminal APS55_RS05650 IPR036291 NAD(P)-binding domain superfamily APS55_RS05655 IPR007920 Protein of unknown function UPF0223 APS55_RS05655 IPR023324 BH2638-like superfamily APS55_RS05660 IPR020550 Inositol monophosphatase, conserved site APS55_RS05660 IPR000760 Inositol monophosphatase-like APS55_RS05660 IPR020583 Inositol monophosphatase, metal-binding site APS55_RS05665 IPR041095 Elongation Factor G, domain II APS55_RS05665 IPR035647 EF-G domain III/V-like APS55_RS05665 IPR000640 Elongation factor EFG, domain V-like APS55_RS05665 IPR031157 Tr-type G domain, conserved site APS55_RS05665 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05665 IPR005225 Small GTP-binding protein domain APS55_RS05665 IPR035651 BipA, domain V APS55_RS05665 IPR004161 Translation elongation factor EFTu-like, domain 2 APS55_RS05665 IPR042116 GTP-binding protein TypA/BipA, C-terminal APS55_RS05665 IPR006298 GTP-binding protein TypA APS55_RS05665 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS05665 IPR000795 Transcription factor, GTP-binding domain APS55_RS05670 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site APS55_RS05670 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA APS55_RS05675 IPR016979 Protein of unknown function DUF2129 APS55_RS05680 IPR004398 RNA methyltransferase, RsmD APS55_RS05680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05685 IPR004821 Cytidyltransferase-like domain APS55_RS05685 IPR001980 Phosphopantetheine adenylyltransferase APS55_RS05685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS05690 IPR027065 Lon protease APS55_RS05690 IPR036034 PDZ superfamily APS55_RS05690 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS05690 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS05690 IPR001478 PDZ domain APS55_RS05690 IPR039381 Endopeptidase La, PDZ domain APS55_RS05690 IPR008269 Peptidase S16, Lon proteolytic domain APS55_RS05700 IPR016192 APOBEC/CMP deaminase, zinc-binding APS55_RS05700 IPR015517 Deoxycytidylate deaminase-related APS55_RS05700 IPR013404 Competence operon E, ComEB APS55_RS05700 IPR035105 Deoxycytidylate deaminase domain APS55_RS05700 IPR002125 Cytidine and deoxycytidylate deaminase domain APS55_RS05700 IPR016193 Cytidine deaminase-like APS55_RS05705 IPR004797 Competence protein ComEC/Rec2 APS55_RS05705 IPR004477 ComEC/Rec2-related protein APS55_RS05705 IPR025405 Domain of unknown function DUF4131 APS55_RS05705 IPR001279 Metallo-beta-lactamase APS55_RS05705 IPR035681 ComA-like, MBL domain APS55_RS05705 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APS55_RS05710 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APS55_RS05710 IPR010372 DNA polymerase III delta, N-terminal APS55_RS05710 IPR005790 DNA polymerase III, delta subunit APS55_RS05710 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05715 IPR002583 Ribosomal protein S20 APS55_RS05715 IPR036510 Ribosomal protein S20 superfamily APS55_RS05720 IPR009068 S15/NS1, RNA-binding APS55_RS05720 IPR000589 Ribosomal protein S15 APS55_RS05720 IPR005290 Ribosomal protein S15, bacterial-type APS55_RS05725 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APS55_RS05725 IPR042173 Ribonuclease J, domain 2 APS55_RS05725 IPR001279 Metallo-beta-lactamase APS55_RS05725 IPR030854 Ribonuclease J, bacteria APS55_RS05725 IPR041636 Ribonuclease J, C-terminal APS55_RS05725 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APS55_RS05725 IPR004613 Ribonuclease J APS55_RS05735 IPR033720 Elongation factor Tu, domain 2 APS55_RS05735 IPR004161 Translation elongation factor EFTu-like, domain 2 APS55_RS05735 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain APS55_RS05735 IPR031157 Tr-type G domain, conserved site APS55_RS05735 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle APS55_RS05735 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS05735 IPR000795 Transcription factor, GTP-binding domain APS55_RS05735 IPR005225 Small GTP-binding protein domain APS55_RS05735 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05735 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APS55_RS05735 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APS55_RS05740 IPR008880 Trigger factor, C-terminal APS55_RS05740 IPR005215 Trigger factor APS55_RS05740 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APS55_RS05740 IPR037041 Trigger factor, C-terminal domain superfamily APS55_RS05740 IPR027304 Trigger factor/SurA domain superfamily APS55_RS05740 IPR036611 Trigger factor ribosome-binding domain superfamily APS55_RS05740 IPR008881 Trigger factor, ribosome-binding, bacterial APS55_RS05745 IPR019489 Clp ATPase, C-terminal APS55_RS05745 IPR004487 Clp protease, ATP-binding subunit ClpX APS55_RS05745 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05745 IPR010603 Zinc finger, ClpX C4-type APS55_RS05745 IPR038366 Zinc finger, ClpX C4-type superfamily APS55_RS05745 IPR003959 ATPase, AAA-type, core APS55_RS05745 IPR003593 AAA+ ATPase domain APS55_RS05750 IPR005225 Small GTP-binding protein domain APS55_RS05750 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC APS55_RS05750 IPR030393 EngB-type guanine nucleotide-binding (G) domain APS55_RS05750 IPR006073 GTP binding domain APS55_RS05750 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05760 IPR036876 UVR domain superfamily APS55_RS05760 IPR004791 UvrABC system, subunit C APS55_RS05760 IPR001943 UVR domain APS55_RS05760 IPR001162 UvrC family homology region APS55_RS05760 IPR010994 RuvA domain 2-like APS55_RS05760 IPR038476 UvrC homology region 2 superfamily APS55_RS05760 IPR035901 GIY-YIG endonuclease superfamily APS55_RS05760 IPR000305 GIY-YIG endonuclease APS55_RS05765 IPR014100 GTP-binding protein Obg/CgtA APS55_RS05765 IPR015349 GTP-binding protein OBG, C-terminal APS55_RS05765 IPR036726 GTP1/OBG domain superfamily APS55_RS05765 IPR031167 OBG-type guanine nucleotide-binding (G) domain APS55_RS05765 IPR035101 GTP-binding protein, Obg-type APS55_RS05765 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily APS55_RS05765 IPR006169 GTP1/OBG domain APS55_RS05765 IPR006074 GTP1/OBG, conserved site APS55_RS05765 IPR006073 GTP binding domain APS55_RS05765 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05770 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APS55_RS05770 IPR013471 Ribonuclease Z/BN APS55_RS05770 IPR001279 Metallo-beta-lactamase APS55_RS05775 IPR001667 DDH domain APS55_RS05775 IPR041122 RecJ, OB domain APS55_RS05775 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal APS55_RS05775 IPR004610 Bacterial RecJ exonuclease APS55_RS05775 IPR003156 DHHA1 domain APS55_RS05775 IPR038763 DHH phosphoesterase superfamily APS55_RS05780 IPR000836 Phosphoribosyltransferase domain APS55_RS05780 IPR005764 Adenine phosphoribosyl transferase APS55_RS05780 IPR029057 Phosphoribosyltransferase-like APS55_RS05800 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain APS55_RS05800 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal APS55_RS05800 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic APS55_RS05800 IPR016039 Thiolase-like APS55_RS05810 IPR036286 LexA/Signal peptidase-like superfamily APS55_RS05810 IPR006199 LexA repressor, DNA-binding domain APS55_RS05810 IPR006197 Peptidase S24, LexA-like APS55_RS05810 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS05810 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS05810 IPR011991 ArsR-like helix-turn-helix domain APS55_RS05810 IPR015927 Peptidase S24/S26A/S26B/S26C APS55_RS05810 IPR039418 LexA-like APS55_RS05810 IPR006200 Transcription regulator LexA APS55_RS05815 IPR009242 Protein of unknown function DUF896 APS55_RS05820 IPR005359 Protein with unknown function UPF0154 APS55_RS05825 IPR002123 Phospholipid/glycerol acyltransferase APS55_RS05830 IPR007848 Methyltransferase small domain APS55_RS05830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05835 IPR035901 GIY-YIG endonuclease superfamily APS55_RS05835 IPR000305 GIY-YIG endonuclease APS55_RS05840 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS55_RS05840 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APS55_RS05840 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain APS55_RS05840 IPR036291 NAD(P)-binding domain superfamily APS55_RS05840 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APS55_RS05845 IPR001865 Ribosomal protein S2 APS55_RS05845 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid APS55_RS05845 IPR018130 Ribosomal protein S2, conserved site APS55_RS05845 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily APS55_RS05850 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation APS55_RS05850 IPR018101 Translation elongation factor Ts, conserved site APS55_RS05850 IPR036402 Elongation factor Ts, dimerisation domain superfamily APS55_RS05850 IPR001816 Translation elongation factor EFTs/EF1B APS55_RS05850 IPR009060 UBA-like superfamily APS55_RS05855 IPR011817 Uridylate kinase APS55_RS05855 IPR015963 Uridylate kinase, bacteria APS55_RS05855 IPR001048 Aspartate/glutamate/uridylate kinase APS55_RS05855 IPR036393 Acetylglutamate kinase-like superfamily APS55_RS05860 IPR036191 RRF superfamily APS55_RS05860 IPR002661 Ribosome recycling factor APS55_RS05860 IPR023584 Ribosome recycling factor domain APS55_RS05870 IPR036424 Decaprenyl diphosphate synthase-like superfamily APS55_RS05870 IPR001441 Decaprenyl diphosphate synthase-like APS55_RS05870 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site APS55_RS05875 IPR000374 Phosphatidate cytidylyltransferase APS55_RS05880 IPR036034 PDZ superfamily APS55_RS05880 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase APS55_RS05880 IPR008915 Peptidase M50 APS55_RS05880 IPR001478 PDZ domain APS55_RS05880 IPR041489 PDZ domain 6 APS55_RS05885 IPR036621 Anticodon-binding domain superfamily APS55_RS05885 IPR002316 Proline-tRNA ligase, class IIa APS55_RS05885 IPR033730 Prokaryote proline-tRNA ligase core domain APS55_RS05885 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily APS55_RS05885 IPR004154 Anticodon-binding APS55_RS05885 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS05885 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APS55_RS05885 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type APS55_RS05885 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 APS55_RS05885 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain APS55_RS05890 IPR012340 Nucleic acid-binding, OB-fold APS55_RS05890 IPR013520 Exonuclease, RNase T/DNA polymerase III APS55_RS05890 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain APS55_RS05890 IPR029460 DNA polymerase, helix-hairpin-helix motif APS55_RS05890 IPR003141 Polymerase/histidinol phosphatase, N-terminal APS55_RS05890 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type APS55_RS05890 IPR012337 Ribonuclease H-like superfamily APS55_RS05890 IPR036397 Ribonuclease H superfamily APS55_RS05890 IPR024754 DNA polymerase III polC-like, N-terminal domain II APS55_RS05890 IPR028112 DNA polymerase III polC-type, N-terminal domain I APS55_RS05890 IPR040982 DNA polymerase III alpha subunit finger domain APS55_RS05890 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain APS55_RS05890 IPR004013 PHP domain APS55_RS05895 IPR035956 RimP, N-terminal domain superfamily APS55_RS05895 IPR028989 Ribosome maturation factor RimP, N-terminal APS55_RS05895 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily APS55_RS05895 IPR028998 Ribosome maturation factor RimP, C-terminal APS55_RS05895 IPR003728 Ribosome maturation factor RimP APS55_RS05900 IPR010213 Transcription termination factor NusA APS55_RS05900 IPR022967 RNA-binding domain, S1 APS55_RS05900 IPR013735 Transcription factor NusA, N-terminal APS55_RS05900 IPR003029 S1 domain APS55_RS05900 IPR004087 K Homology domain APS55_RS05900 IPR036555 NusA, N-terminal domain superfamily APS55_RS05900 IPR030842 Transcription termination/antitermination protein NusA, bacterial APS55_RS05900 IPR012340 Nucleic acid-binding, OB-fold APS55_RS05900 IPR009019 K homology domain superfamily, prokaryotic type APS55_RS05900 IPR015946 K homology domain-like, alpha/beta APS55_RS05900 IPR025249 KH domain, NusA-like APS55_RS05905 IPR035931 YlxR-like superfamily APS55_RS05905 IPR037465 Uncharacterized protein YlxR APS55_RS05905 IPR007393 Domain of unknown function DUF448 APS55_RS05910 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 APS55_RS05910 IPR039107 Ribosomal protein YlxQ APS55_RS05910 IPR029064 50S ribosomal protein L30e-like APS55_RS05910 IPR039109 Ribosomal protein L30/YlxQ APS55_RS05915 IPR006847 Translation initiation factor IF-2, N-terminal APS55_RS05915 IPR015760 Translation initiation factor IF- 2 APS55_RS05915 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05915 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS05915 IPR036925 Translation initiation factor IF-2, domain 3 superfamily APS55_RS05915 IPR023115 Translation initiation factor IF- 2, domain 3 APS55_RS05915 IPR005225 Small GTP-binding protein domain APS55_RS05915 IPR000178 Translation initiation factor aIF-2, bacterial-like APS55_RS05915 IPR000795 Transcription factor, GTP-binding domain APS55_RS05920 IPR020053 Ribosome-binding factor A, conserved site APS55_RS05920 IPR000238 Ribosome-binding factor A APS55_RS05920 IPR015946 K homology domain-like, alpha/beta APS55_RS05920 IPR023799 Ribosome-binding factor A domain superfamily APS55_RS05925 IPR032819 tRNA pseudouridylate synthase B, C-terminal APS55_RS05925 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS05925 IPR002501 Pseudouridine synthase II, N-terminal APS55_RS05925 IPR014780 tRNA pseudouridine synthase II, TruB APS55_RS05930 IPR004821 Cytidyltransferase-like domain APS55_RS05930 IPR015864 FAD synthetase APS55_RS05930 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic APS55_RS05930 IPR023465 Riboflavin kinase domain superfamily APS55_RS05930 IPR023468 Riboflavin kinase APS55_RS05930 IPR002606 Riboflavin kinase, bacterial APS55_RS05930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS05935 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily APS55_RS05935 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain APS55_RS05935 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS05935 IPR029016 GAF-like domain superfamily APS55_RS05935 IPR002571 Heat-inducible transcription repressor HrcA APS55_RS05935 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal APS55_RS05935 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS05940 IPR009012 GrpE nucleotide exchange factor, head APS55_RS05940 IPR013805 GrpE nucleotide exchange factor, coiled-coil APS55_RS05940 IPR000740 GrpE nucleotide exchange factor APS55_RS05945 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily APS55_RS05945 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily APS55_RS05945 IPR018181 Heat shock protein 70, conserved site APS55_RS05945 IPR013126 Heat shock protein 70 family APS55_RS05945 IPR012725 Chaperone DnaK APS55_RS05950 IPR036869 Chaperone J-domain superfamily APS55_RS05950 IPR008971 HSP40/DnaJ peptide-binding APS55_RS05950 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily APS55_RS05950 IPR001305 Heat shock protein DnaJ, cysteine-rich domain APS55_RS05950 IPR018253 DnaJ domain, conserved site APS55_RS05950 IPR001623 DnaJ domain APS55_RS05950 IPR002939 Chaperone DnaJ, C-terminal APS55_RS05950 IPR012724 Chaperone DnaJ APS55_RS05955 IPR006297 Elongation factor 4 APS55_RS05955 IPR035647 EF-G domain III/V-like APS55_RS05955 IPR000640 Elongation factor EFG, domain V-like APS55_RS05955 IPR004161 Translation elongation factor EFTu-like, domain 2 APS55_RS05955 IPR013842 GTP-binding protein LepA, C-terminal APS55_RS05955 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS05955 IPR038363 LepA, C-terminal domain superfamily APS55_RS05955 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS05955 IPR035654 Elongation factor 4, domain IV APS55_RS05955 IPR005225 Small GTP-binding protein domain APS55_RS05955 IPR000795 Transcription factor, GTP-binding domain APS55_RS05960 IPR006043 Xanthine/uracil/vitamin C permease APS55_RS05960 IPR006042 Xanthine/uracil permease APS55_RS05960 IPR029935 Uracil permease APS55_RS05965 IPR007554 CDP-glycerol glycerophosphotransferase APS55_RS05980 IPR004498 Ribosomal protein L11 methyltransferase APS55_RS05980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS05985 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS55_RS05985 IPR006700 Ribosomal RNA small subunit methyltransferase E APS55_RS05985 IPR015947 PUA-like superfamily APS55_RS05985 IPR029028 Alpha/beta knot methyltransferases APS55_RS05990 IPR002912 ACT domain APS55_RS05990 IPR004095 TGS APS55_RS05990 IPR012676 TGS-like APS55_RS05990 IPR012675 Beta-grasp domain superfamily APS55_RS05990 IPR007685 RelA/SpoT APS55_RS05990 IPR033655 RelA, TGS domain APS55_RS05990 IPR003607 HD/PDEase domain APS55_RS05990 IPR004811 RelA/SpoT family APS55_RS05995 IPR003732 D-aminoacyl-tRNA deacylase DTD APS55_RS05995 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily APS55_RS06000 IPR037512 Phosphoglycolate phosphatase, prokaryotic APS55_RS06000 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic APS55_RS06000 IPR036412 HAD-like superfamily APS55_RS06000 IPR006439 HAD hydrolase, subfamily IA APS55_RS06000 IPR023198 Phosphoglycolate phosphatase-like, domain 2 APS55_RS06000 IPR041492 Haloacid dehalogenase-like hydrolase APS55_RS06000 IPR023214 HAD superfamily APS55_RS06005 IPR016477 Fructosamine/Ketosamine-3-kinase APS55_RS06005 IPR011009 Protein kinase-like domain superfamily APS55_RS06010 IPR033656 Histidyl-anticodon-binding APS55_RS06010 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain APS55_RS06010 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS06010 IPR004154 Anticodon-binding APS55_RS06010 IPR015807 Histidine-tRNA ligase APS55_RS06010 IPR036621 Anticodon-binding domain superfamily APS55_RS06010 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit APS55_RS06015 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06015 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APS55_RS06015 IPR029351 GAD domain APS55_RS06015 IPR004115 GAD-like domain superfamily APS55_RS06015 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb APS55_RS06015 IPR004524 Aspartate-tRNA ligase, type 1 APS55_RS06015 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) APS55_RS06015 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS06020 IPR025948 HTH-like domain APS55_RS06020 IPR038965 Transposase InsF-like APS55_RS06020 IPR001584 Integrase, catalytic core APS55_RS06020 IPR012337 Ribonuclease H-like superfamily APS55_RS06020 IPR036397 Ribonuclease H superfamily APS55_RS06030 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APS55_RS06030 IPR019264 Domain of unknown function DUF2179 APS55_RS06030 IPR003740 Uncharacterised membrane protein YitT APS55_RS06035 IPR007554 CDP-glycerol glycerophosphotransferase APS55_RS06040 IPR000412 ABC-2 transporter APS55_RS06040 IPR013525 ABC-2 type transporter APS55_RS06045 IPR007554 CDP-glycerol glycerophosphotransferase APS55_RS06050 IPR018246 AP endonuclease 2, zinc binding site APS55_RS06050 IPR013022 Xylose isomerase-like, TIM barrel domain APS55_RS06050 IPR036237 Xylose isomerase-like superfamily APS55_RS06050 IPR001719 AP endonuclease 2 APS55_RS06055 IPR005177 Bifunctional kinase-pyrophosphorylase APS55_RS06055 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein APS55_RS06060 IPR001911 Ribosomal protein S21 APS55_RS06060 IPR018278 Ribosomal protein S21, conserved site APS55_RS06060 IPR038380 Ribosomal protein S21 superfamily APS55_RS06065 IPR019004 Uncharacterised protein YqeY/Aim41 APS55_RS06065 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like APS55_RS06065 IPR042184 YqeY/Aim41, N-terminal domain APS55_RS06065 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 APS55_RS06070 IPR003714 PhoH-like protein APS55_RS06070 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06075 IPR023091 Metalloprotease catalytic domain superfamily, predicted APS55_RS06075 IPR020549 Endoribonuclease YbeY, conserved site APS55_RS06075 IPR002036 Endoribonuclease YbeY APS55_RS06080 IPR033717 Undecaprenol kinase APS55_RS06080 IPR036945 Diacylglycerol kinase (DAGK) superfamily APS55_RS06080 IPR000829 DAGK family APS55_RS06085 IPR005225 Small GTP-binding protein domain APS55_RS06085 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06085 IPR030388 Era-type guanine nucleotide-binding (G) domain APS55_RS06085 IPR005662 GTP-binding protein Era APS55_RS06085 IPR006073 GTP binding domain APS55_RS06085 IPR015946 K homology domain-like, alpha/beta APS55_RS06085 IPR004044 K Homology domain, type 2 APS55_RS06085 IPR009019 K homology domain superfamily, prokaryotic type APS55_RS06090 IPR037278 ARFGAP/RecO-like zinc finger APS55_RS06090 IPR022572 DNA replication/recombination mediator RecO, N-terminal APS55_RS06090 IPR042242 Recombination protein O, zinc-binding domain APS55_RS06090 IPR003717 Recombination protein O, RecO APS55_RS06090 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06095 IPR002310 Glycine-tRNA ligase, alpha subunit APS55_RS06095 IPR006194 Glycine-tRNA synthetase, heterodimeric APS55_RS06100 IPR006194 Glycine-tRNA synthetase, heterodimeric APS55_RS06100 IPR015944 Glycine-tRNA ligase, beta subunit APS55_RS06105 IPR013264 DNA primase, catalytic core, N-terminal APS55_RS06105 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily APS55_RS06105 IPR019475 DNA primase, DnaB-helicase binding domain APS55_RS06105 IPR002694 Zinc finger, CHC2-type APS55_RS06105 IPR006171 TOPRIM domain APS55_RS06105 IPR034151 Bacterial DnaG primase, TOPRIM domain APS55_RS06105 IPR030846 DNA primase DnaG, bacteria APS55_RS06105 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APS55_RS06105 IPR006295 DNA primase, DnaG APS55_RS06105 IPR036977 DNA Primase, CHC2-type zinc finger APS55_RS06110 IPR007127 RNA polymerase sigma factor 70, region 1.1 APS55_RS06110 IPR028630 RNA polymerase sigma factor RpoD APS55_RS06110 IPR014284 RNA polymerase sigma-70 like domain APS55_RS06110 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06110 IPR012760 RNA polymerase sigma factor RpoD, C-terminal APS55_RS06110 IPR013324 RNA polymerase sigma factor, region 3/4-like APS55_RS06110 IPR000943 RNA polymerase sigma-70 APS55_RS06110 IPR009042 RNA polymerase sigma-70 region 1.2 APS55_RS06110 IPR007627 RNA polymerase sigma-70 region 2 APS55_RS06110 IPR007624 RNA polymerase sigma-70 region 3 APS55_RS06110 IPR007630 RNA polymerase sigma-70 region 4 APS55_RS06110 IPR013325 RNA polymerase sigma factor, region 2 APS55_RS06110 IPR042189 Sigma-70 factor, region 1.1 superfamily APS55_RS06115 IPR006901 tRNA methyltransferase TrmK APS55_RS06115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS06120 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily APS55_RS06120 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APS55_RS06125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APS55_RS06125 IPR036264 Bacterial exopeptidase dimerisation domain APS55_RS06125 IPR002933 Peptidase M20 APS55_RS06125 IPR011650 Peptidase M20, dimerisation domain APS55_RS06125 IPR010161 Peptidase M20B, tripeptide aminopeptidase APS55_RS06130 IPR003593 AAA+ ATPase domain APS55_RS06130 IPR003959 ATPase, AAA-type, core APS55_RS06130 IPR017730 Chaperonin ClpB APS55_RS06130 IPR041546 ClpA/ClpB, AAA lid domain APS55_RS06130 IPR036628 Clp, N-terminal domain superfamily APS55_RS06130 IPR004176 Clp, N-terminal APS55_RS06130 IPR001270 ClpA/B family APS55_RS06130 IPR018368 ClpA/B, conserved site 1 APS55_RS06130 IPR028299 ClpA/B, conserved site 2 APS55_RS06130 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06130 IPR019489 Clp ATPase, C-terminal APS55_RS06140 IPR004805 DNA polymerase III, alpha subunit APS55_RS06140 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain APS55_RS06140 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain APS55_RS06140 IPR016195 Polymerase/histidinol phosphatase-like APS55_RS06140 IPR029460 DNA polymerase, helix-hairpin-helix motif APS55_RS06140 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type APS55_RS06140 IPR004013 PHP domain APS55_RS06140 IPR003141 Polymerase/histidinol phosphatase, N-terminal APS55_RS06140 IPR040982 DNA polymerase III alpha subunit finger domain APS55_RS06145 IPR001697 Pyruvate kinase APS55_RS06145 IPR040442 Pyruvate kinase-like domain superfamily APS55_RS06145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily APS55_RS06145 IPR008279 PEP-utilising enzyme, mobile domain APS55_RS06145 IPR015793 Pyruvate kinase, barrel APS55_RS06145 IPR015806 Pyruvate kinase, insert domain superfamily APS55_RS06145 IPR011037 Pyruvate kinase-like, insert domain superfamily APS55_RS06145 IPR036918 Pyruvate kinase, C-terminal domain superfamily APS55_RS06145 IPR015795 Pyruvate kinase, C-terminal APS55_RS06150 IPR039566 Conserved virulence factor B, S1 domain APS55_RS06150 IPR014464 Conserved virulence factor B APS55_RS06150 IPR040764 Conserved virulence factor B-like, winged helix domain APS55_RS06150 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06155 IPR011010 DNA breaking-rejoining enzyme, catalytic core APS55_RS06155 IPR004107 Integrase, SAM-like, N-terminal APS55_RS06155 IPR023009 Tyrosine recombinase XerC/XerD APS55_RS06155 IPR013762 Integrase-like, catalytic domain superfamily APS55_RS06155 IPR002104 Integrase, catalytic domain APS55_RS06155 IPR010998 Integrase/recombinase, N-terminal APS55_RS06155 IPR011932 Tyrosine recombinase XerD APS55_RS06160 IPR000182 GNAT domain APS55_RS06160 IPR016181 Acyl-CoA N-acyltransferase APS55_RS06165 IPR003768 Segregation and condensation protein A APS55_RS06170 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06170 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS06170 IPR005234 Chromosome segregation/condensation protein ScpB APS55_RS06175 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain APS55_RS06175 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F APS55_RS06175 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS06175 IPR006145 Pseudouridine synthase, RsuA/RluA APS55_RS06175 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site APS55_RS06175 IPR036986 RNA-binding S4 domain superfamily APS55_RS06175 IPR002942 RNA-binding S4 domain APS55_RS06180 IPR024529 ECF transporter, substrate-specific component APS55_RS06180 IPR025720 ECF transporter, Riboflavin transporter RibU APS55_RS06190 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS06190 IPR004589 DNA helicase, ATP-dependent, RecQ type APS55_RS06190 IPR011545 DEAD/DEAH box helicase domain APS55_RS06190 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site APS55_RS06190 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06190 IPR001650 Helicase, C-terminal APS55_RS06200 IPR011994 Cytidylate kinase domain APS55_RS06200 IPR003136 Cytidylate kinase APS55_RS06200 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06205 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06205 IPR003029 S1 domain APS55_RS06205 IPR022967 RNA-binding domain, S1 APS55_RS06210 IPR016484 GTP-binding protein EngA APS55_RS06210 IPR006073 GTP binding domain APS55_RS06210 IPR032859 GTPase Der, C-terminal KH-domain-like APS55_RS06210 IPR015946 K homology domain-like, alpha/beta APS55_RS06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06210 IPR005225 Small GTP-binding protein domain APS55_RS06210 IPR031166 EngA-type guanine nucleotide-binding (G) domain APS55_RS06215 IPR020816 Histone-like DNA-binding protein, conserved site APS55_RS06215 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily APS55_RS06215 IPR000119 Histone-like DNA-binding protein APS55_RS06230 IPR032810 CCA-adding enzyme, C-terminal APS55_RS06230 IPR023068 CCA-adding enzyme, firmicutes APS55_RS06230 IPR002646 Poly A polymerase, head domain APS55_RS06230 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APS55_RS06235 IPR003593 AAA+ ATPase domain APS55_RS06235 IPR032524 ABC transporter Uup, C-terminal APS55_RS06235 IPR032781 ABC-transporter extension domain APS55_RS06235 IPR003439 ABC transporter-like APS55_RS06235 IPR017871 ABC transporter, conserved site APS55_RS06235 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06235 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily APS55_RS06240 IPR000398 Thymidylate synthase APS55_RS06240 IPR020940 Thymidylate synthase, active site APS55_RS06240 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily APS55_RS06240 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain APS55_RS06245 IPR012259 Dihydrofolate reductase APS55_RS06245 IPR024072 Dihydrofolate reductase-like domain superfamily APS55_RS06245 IPR017925 Dihydrofolate reductase conserved site APS55_RS06245 IPR001796 Dihydrofolate reductase domain APS55_RS06250 IPR013830 SGNH hydrolase-type esterase domain APS55_RS06250 IPR036514 SGNH hydrolase superfamily APS55_RS06260 IPR036806 YozE SAM-like superfamily APS55_RS06260 IPR023089 YozE SAM-like domain APS55_RS06260 IPR010673 Protein of unknown function UPF0346 APS55_RS06265 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06265 IPR016478 GTPase, MTG1 APS55_RS06265 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily APS55_RS06265 IPR019991 GTP-binding protein, ribosome biogenesis APS55_RS06265 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain APS55_RS06265 IPR006073 GTP binding domain APS55_RS06270 IPR036397 Ribonuclease H superfamily APS55_RS06270 IPR024567 Ribonuclease HII/HIII domain APS55_RS06270 IPR012337 Ribonuclease H-like superfamily APS55_RS06270 IPR001352 Ribonuclease HII/HIII APS55_RS06270 IPR022898 Ribonuclease HII APS55_RS06275 IPR003488 DNA recombination-mediator protein A APS55_RS06275 IPR041104 DNA processing protein A, sterile alpha motif domain APS55_RS06280 IPR023406 DNA topoisomerase, type IA, active site APS55_RS06280 IPR013497 DNA topoisomerase, type IA, central APS55_RS06280 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APS55_RS06280 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APS55_RS06280 IPR000380 DNA topoisomerase, type IA APS55_RS06280 IPR003602 DNA topoisomerase, type IA, DNA-binding domain APS55_RS06280 IPR013498 DNA topoisomerase, type IA, zn finger APS55_RS06280 IPR005733 DNA topoisomerase I, bacterial-type APS55_RS06280 IPR028612 DNA topoisomerase I, type IA APS55_RS06280 IPR006171 TOPRIM domain APS55_RS06280 IPR034149 DNA topoisomerase 1, TOPRIM domain APS55_RS06280 IPR003601 DNA topoisomerase, type IA, domain 2 APS55_RS06280 IPR023405 DNA topoisomerase, type IA, core domain APS55_RS06280 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APS55_RS06285 IPR011010 DNA breaking-rejoining enzyme, catalytic core APS55_RS06285 IPR010998 Integrase/recombinase, N-terminal APS55_RS06285 IPR002104 Integrase, catalytic domain APS55_RS06285 IPR013762 Integrase-like, catalytic domain superfamily APS55_RS06285 IPR004107 Integrase, SAM-like, N-terminal APS55_RS06285 IPR011931 Tyrosine recombinase XerC APS55_RS06285 IPR023009 Tyrosine recombinase XerC/XerD APS55_RS06290 IPR014718 Glycoside hydrolase-type carbohydrate-binding APS55_RS06290 IPR037481 Protein LacX APS55_RS06290 IPR011013 Galactose mutarotase-like domain superfamily APS55_RS06290 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase APS55_RS06295 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes APS55_RS06295 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 APS55_RS06295 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APS55_RS06300 IPR020456 Acylphosphatase APS55_RS06300 IPR001792 Acylphosphatase-like domain APS55_RS06300 IPR036046 Acylphosphatase-like domain superfamily APS55_RS06300 IPR017968 Acylphosphatase, conserved site APS55_RS06305 IPR029028 Alpha/beta knot methyltransferases APS55_RS06305 IPR029064 50S ribosomal protein L30e-like APS55_RS06305 IPR001537 tRNA/rRNA methyltransferase, SpoU type APS55_RS06305 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS55_RS06305 IPR013123 RNA 2-O ribose methyltransferase, substrate binding APS55_RS06315 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06315 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS06315 IPR002577 Helix-turn-helix, HxlR type APS55_RS06315 IPR011991 ArsR-like helix-turn-helix domain APS55_RS06320 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit APS55_RS06320 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial APS55_RS06320 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS06320 IPR002319 Phenylalanyl-tRNA synthetase APS55_RS06320 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APS55_RS06320 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal APS55_RS06325 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain APS55_RS06325 IPR002547 tRNA-binding domain APS55_RS06325 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain APS55_RS06325 IPR005146 B3/B4 tRNA-binding domain APS55_RS06325 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06325 IPR005121 Ferrodoxin-fold anticodon-binding domain APS55_RS06325 IPR009061 Putative DNA-binding domain superfamily APS55_RS06325 IPR005147 tRNA synthetase, B5-domain APS55_RS06325 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily APS55_RS06325 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APS55_RS06325 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit APS55_RS06330 IPR003770 Endolytic murein transglycosylase APS55_RS06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06335 IPR006083 Phosphoribulokinase/uridine kinase APS55_RS06335 IPR026008 Uridine kinase APS55_RS06335 IPR000764 Uridine kinase-like APS55_RS06340 IPR018151 Transcription elongation factor, GreA/GreB, conserved site APS55_RS06340 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily APS55_RS06340 IPR006359 Transcription elongation factor GreA APS55_RS06340 IPR028624 Transcription elongation factor GreA/GreB APS55_RS06340 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal APS55_RS06340 IPR023459 Transcription elongation factor GreA/GreB family APS55_RS06340 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal APS55_RS06340 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily APS55_RS06350 IPR012337 Ribonuclease H-like superfamily APS55_RS06350 IPR001584 Integrase, catalytic core APS55_RS06350 IPR038965 Transposase InsF-like APS55_RS06350 IPR036397 Ribonuclease H superfamily APS55_RS06360 IPR036138 Penicillin-binding protein, dimerisation domain superfamily APS55_RS06360 IPR001460 Penicillin-binding protein, transpeptidase APS55_RS06360 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS06360 IPR005311 Penicillin-binding protein, dimerisation domain APS55_RS06365 IPR018264 Ribosomal protein L33, conserved site APS55_RS06365 IPR011332 Zinc-binding ribosomal protein APS55_RS06365 IPR001705 Ribosomal protein L33 APS55_RS06365 IPR038584 Ribosomal protein L33 superfamily APS55_RS06370 IPR002698 5-formyltetrahydrofolate cyclo-ligase APS55_RS06370 IPR037171 NagB/RpiA transferase-like APS55_RS06370 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily APS55_RS06375 IPR022764 Peptidase S54, rhomboid domain APS55_RS06375 IPR035952 Rhomboid-like superfamily APS55_RS06385 IPR004654 Glucokinase ROK APS55_RS06385 IPR000600 ROK family APS55_RS06400 IPR001584 Integrase, catalytic core APS55_RS06400 IPR012337 Ribonuclease H-like superfamily APS55_RS06400 IPR036397 Ribonuclease H superfamily APS55_RS06400 IPR038965 Transposase InsF-like APS55_RS06405 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06405 IPR018022 IPP transferase APS55_RS06405 IPR039657 Dimethylallyltransferase APS55_RS06410 IPR000551 MerR-type HTH domain APS55_RS06410 IPR009061 Putative DNA-binding domain superfamily APS55_RS06415 IPR008147 Glutamine synthetase, beta-Grasp domain APS55_RS06415 IPR036651 Glutamine synthetase, N-terminal domain superfamily APS55_RS06415 IPR027303 Glutamine synthetase, glycine-rich site APS55_RS06415 IPR004809 Glutamine synthetase type I APS55_RS06415 IPR008146 Glutamine synthetase, catalytic domain APS55_RS06415 IPR027302 Glutamine synthetase, N-terminal conserved site APS55_RS06415 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain APS55_RS06430 IPR036164 L21-like superfamily APS55_RS06430 IPR028909 Ribosomal protein L21-like APS55_RS06430 IPR018258 Ribosomal protein L21, conserved site APS55_RS06430 IPR001787 Ribosomal protein L21 APS55_RS06440 IPR001684 Ribosomal protein L27 APS55_RS06440 IPR018261 Ribosomal protein L27, conserved site APS55_RS06445 IPR013852 Translation elongation factor P/YeiP, conserved site APS55_RS06445 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06445 IPR020599 Translation elongation factor P/YeiP APS55_RS06445 IPR014722 Ribosomal protein L2, domain 2 APS55_RS06445 IPR015365 Elongation factor P, C-terminal APS55_RS06445 IPR001059 Translation elongation factor P/YeiP, central APS55_RS06445 IPR013185 Translation elongation factor, KOW-like APS55_RS06445 IPR008991 Translation protein SH3-like domain superfamily APS55_RS06445 IPR011768 Translation elongation factor P APS55_RS06450 IPR005531 Alkaline shock protein Asp23 APS55_RS06455 IPR011605 NusB antitermination factor APS55_RS06455 IPR006027 NusB/RsmB/TIM44 APS55_RS06455 IPR035926 NusB-like superfamily APS55_RS06460 IPR036291 NAD(P)-binding domain superfamily APS55_RS06460 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APS55_RS06460 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase APS55_RS06460 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APS55_RS06460 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site APS55_RS06465 IPR020579 Exonuclease VII, large subunit, C-terminal APS55_RS06465 IPR025824 OB-fold nucleic acid binding domain APS55_RS06465 IPR003753 Exonuclease VII, large subunit APS55_RS06470 IPR037004 Exonuclease VII, small subunit superfamily APS55_RS06470 IPR003761 Exonuclease VII, small subunit APS55_RS06475 IPR033749 Polyprenyl synthetase, conserved site APS55_RS06475 IPR000092 Polyprenyl synthetase APS55_RS06475 IPR008949 Isoprenoid synthase domain superfamily APS55_RS06480 IPR004538 Haemolysin A /rRNA methyltransferase TlyA APS55_RS06480 IPR002942 RNA-binding S4 domain APS55_RS06480 IPR002877 Ribosomal RNA methyltransferase FtsJ domain APS55_RS06480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS06480 IPR036986 RNA-binding S4 domain superfamily APS55_RS06485 IPR038729 Rad50/SbcC-type AAA domain APS55_RS06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06485 IPR004604 DNA recombination/repair protein RecN APS55_RS06490 IPR017665 Guanylate kinase APS55_RS06490 IPR020590 Guanylate kinase, conserved site APS55_RS06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06490 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APS55_RS06490 IPR008144 Guanylate kinase-like domain APS55_RS06495 IPR036161 RPB6/omega subunit-like superfamily APS55_RS06495 IPR003716 DNA-directed RNA polymerase, omega subunit APS55_RS06495 IPR012293 RNA polymerase subunit, RPB6/omega APS55_RS06495 IPR006110 RNA polymerase, subunit omega/K/RPB6 APS55_RS06500 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC APS55_RS06500 IPR003382 Flavoprotein APS55_RS06500 IPR036551 Flavin prenyltransferase-like APS55_RS06500 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal APS55_RS06500 IPR035929 CoaB-like superfamily APS55_RS06505 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily APS55_RS06505 IPR041222 Primosomal protein N', 3' DNA-binding domain APS55_RS06505 IPR005259 Primosomal protein N' APS55_RS06505 IPR006935 Helicase/UvrB, N-terminal APS55_RS06505 IPR001650 Helicase, C-terminal APS55_RS06505 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS06505 IPR041236 Primosomal protein N, C-terminal domain APS55_RS06505 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06505 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain APS55_RS06510 IPR002376 Formyl transferase, N-terminal APS55_RS06510 IPR011034 Formyl transferase-like, C-terminal domain superfamily APS55_RS06510 IPR037022 Formyl transferase, C-terminal domain superfamily APS55_RS06510 IPR005793 Formyl transferase, C-terminal APS55_RS06510 IPR005794 Methionyl-tRNA formyltransferase APS55_RS06510 IPR001555 Phosphoribosylglycinamide formyltransferase, active site APS55_RS06510 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain APS55_RS06510 IPR036477 Formyl transferase, N-terminal domain superfamily APS55_RS06515 IPR006027 NusB/RsmB/TIM44 APS55_RS06515 IPR035926 NusB-like superfamily APS55_RS06515 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APS55_RS06515 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site APS55_RS06515 IPR023267 RNA (C5-cytosine) methyltransferase APS55_RS06515 IPR004573 rRNA small subunit methyltransferase B APS55_RS06515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS06520 IPR036457 PPM-type phosphatase domain superfamily APS55_RS06520 IPR015655 Protein phosphatase 2C family APS55_RS06520 IPR001932 PPM-type phosphatase domain APS55_RS06525 IPR000719 Protein kinase domain APS55_RS06525 IPR008271 Serine/threonine-protein kinase, active site APS55_RS06525 IPR017441 Protein kinase, ATP binding site APS55_RS06525 IPR011009 Protein kinase-like domain superfamily APS55_RS06525 IPR005543 PASTA domain APS55_RS06530 IPR004881 Ribosome biogenesis GTPase RsgA APS55_RS06530 IPR010914 RsgA GTPase domain APS55_RS06530 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal APS55_RS06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06530 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain APS55_RS06530 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06535 IPR011060 Ribulose-phosphate binding barrel APS55_RS06535 IPR000056 Ribulose-phosphate 3-epimerase-like APS55_RS06535 IPR026019 Ribulose-phosphate 3-epimerase APS55_RS06535 IPR013785 Aldolase-type TIM barrel APS55_RS06540 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily APS55_RS06540 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily APS55_RS06540 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain APS55_RS06540 IPR006282 Thiamin pyrophosphokinase APS55_RS06540 IPR007371 Thiamin pyrophosphokinase, catalytic domain APS55_RS06545 IPR001383 Ribosomal protein L28 APS55_RS06545 IPR037147 Ribosomal protein L28/L24 superfamily APS55_RS06545 IPR026569 Ribosomal protein L28/L24 APS55_RS06545 IPR034704 L28p-like APS55_RS06550 IPR005531 Alkaline shock protein Asp23 APS55_RS06555 IPR033470 Uncharacterised protein, DhaK domain APS55_RS06555 IPR036117 DhaL domain superfamily APS55_RS06555 IPR004007 DhaL domain APS55_RS06555 IPR019986 DAK2 domain-containing protein YloV APS55_RS06560 IPR004609 ATP-dependent DNA helicase RecG APS55_RS06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06560 IPR012340 Nucleic acid-binding, OB-fold APS55_RS06560 IPR001650 Helicase, C-terminal APS55_RS06560 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS06560 IPR011545 DEAD/DEAH box helicase domain APS55_RS06560 IPR033454 RecG, wedge domain APS55_RS06565 IPR012281 Phospholipid biosynthesis protein, PlsX-like APS55_RS06565 IPR003664 Fatty acid synthesis PlsX protein APS55_RS06570 IPR009081 Phosphopantetheine binding ACP domain APS55_RS06570 IPR036736 ACP-like superfamily APS55_RS06570 IPR003231 Acyl carrier protein (ACP) APS55_RS06575 IPR036389 Ribonuclease III, endonuclease domain superfamily APS55_RS06575 IPR014720 Double-stranded RNA-binding domain APS55_RS06575 IPR000999 Ribonuclease III domain APS55_RS06575 IPR011907 Ribonuclease III APS55_RS06580 IPR011890 Structural maintenance of chromosomes protein, prokaryotic APS55_RS06580 IPR036277 SMCs flexible hinge superfamily APS55_RS06580 IPR010935 SMCs flexible hinge APS55_RS06580 IPR024704 Structural maintenance of chromosomes protein APS55_RS06580 IPR003395 RecF/RecN/SMC, N-terminal APS55_RS06580 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06585 IPR036225 SRP/SRP receptor, N-terminal APS55_RS06585 IPR004390 Signal-recognition particle receptor FtsY APS55_RS06585 IPR013822 Signal recognition particle SRP54, helical bundle APS55_RS06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06585 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APS55_RS06585 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily APS55_RS06585 IPR003593 AAA+ ATPase domain APS55_RS06590 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06590 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like APS55_RS06590 IPR013324 RNA polymerase sigma factor, region 3/4-like APS55_RS06595 IPR003593 AAA+ ATPase domain APS55_RS06595 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily APS55_RS06595 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain APS55_RS06595 IPR022941 Signal recognition particle, SRP54 subunit APS55_RS06595 IPR004780 Signal recognition particle protein APS55_RS06595 IPR004125 Signal recognition particle, SRP54 subunit, M-domain APS55_RS06595 IPR013822 Signal recognition particle SRP54, helical bundle APS55_RS06595 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily APS55_RS06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06615 IPR000307 Ribosomal protein S16 APS55_RS06615 IPR023803 Ribosomal protein S16 domain superfamily APS55_RS06620 IPR015946 K homology domain-like, alpha/beta APS55_RS06620 IPR009019 K homology domain superfamily, prokaryotic type APS55_RS06620 IPR020627 Uncharacterised protein family UPF0109 APS55_RS06625 IPR027275 PRC-barrel domain APS55_RS06625 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS06625 IPR036976 RimM, N-terminal domain superfamily APS55_RS06625 IPR011961 16S rRNA processing protein RimM APS55_RS06625 IPR011033 PRC-barrel-like superfamily APS55_RS06625 IPR002676 RimM, N-terminal APS55_RS06630 IPR029028 Alpha/beta knot methyltransferases APS55_RS06630 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria APS55_RS06630 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal APS55_RS06630 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain APS55_RS06630 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS55_RS06635 IPR038657 Ribosomal protein L19 superfamily APS55_RS06635 IPR001857 Ribosomal protein L19 APS55_RS06635 IPR018257 Ribosomal protein L19, conserved site APS55_RS06635 IPR008991 Translation protein SH3-like domain superfamily APS55_RS06640 IPR005322 Peptidase C69, dipeptidase A APS55_RS06645 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type APS55_RS06645 IPR014347 Tautomerase/MIF superfamily APS55_RS06645 IPR004370 4-oxalocrotonate tautomerase APS55_RS06650 IPR000577 Carbohydrate kinase, FGGY APS55_RS06650 IPR005999 Glycerol kinase APS55_RS06650 IPR018485 Carbohydrate kinase, FGGY, C-terminal APS55_RS06650 IPR018483 Carbohydrate kinase, FGGY, conserved site APS55_RS06650 IPR018484 Carbohydrate kinase, FGGY, N-terminal APS55_RS06655 IPR036412 HAD-like superfamily APS55_RS06655 IPR000150 Cof family APS55_RS06655 IPR006379 HAD-superfamily hydrolase, subfamily IIB APS55_RS06655 IPR023214 HAD superfamily APS55_RS06660 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal APS55_RS06660 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type APS55_RS06660 IPR023267 RNA (C5-cytosine) methyltransferase APS55_RS06660 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain APS55_RS06660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS06675 IPR013785 Aldolase-type TIM barrel APS55_RS06675 IPR000262 FMN-dependent dehydrogenase APS55_RS06675 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent APS55_RS06680 IPR036554 GHMP kinase, C-terminal domain superfamily APS55_RS06680 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS06680 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS06680 IPR006204 GHMP kinase N-terminal domain APS55_RS06680 IPR013750 GHMP kinase, C-terminal domain APS55_RS06680 IPR035102 Phosphomevalonate kinase APS55_RS06680 IPR005917 Phosphomevalonate kinase, bacteria APS55_RS06690 IPR006206 Mevalonate/galactokinase APS55_RS06690 IPR006203 GHMP kinase, ATP-binding, conserved site APS55_RS06690 IPR006204 GHMP kinase N-terminal domain APS55_RS06690 IPR036554 GHMP kinase, C-terminal domain superfamily APS55_RS06690 IPR013750 GHMP kinase, C-terminal domain APS55_RS06690 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS06690 IPR019539 Galactokinase galactose-binding domain APS55_RS06690 IPR019741 Galactokinase, conserved site APS55_RS06690 IPR022963 Galactokinase, bacterial APS55_RS06690 IPR000705 Galactokinase APS55_RS06690 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS06695 IPR001650 Helicase, C-terminal APS55_RS06695 IPR012337 Ribonuclease H-like superfamily APS55_RS06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06695 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type APS55_RS06695 IPR013520 Exonuclease, RNase T/DNA polymerase III APS55_RS06695 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain APS55_RS06695 IPR006310 3'-5' exonuclease DinG APS55_RS06695 IPR006555 ATP-dependent helicase, C-terminal APS55_RS06695 IPR036397 Ribonuclease H superfamily APS55_RS06710 IPR036950 Penicillin binding protein transglycosylase domain APS55_RS06710 IPR001264 Glycosyl transferase, family 51 APS55_RS06710 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS06710 IPR023346 Lysozyme-like domain superfamily APS55_RS06710 IPR001460 Penicillin-binding protein, transpeptidase APS55_RS06715 IPR004612 Holliday junction resolvase RecU APS55_RS06715 IPR011335 Restriction endonuclease type II-like APS55_RS06715 IPR011856 tRNA endonuclease-like domain superfamily APS55_RS06720 IPR010697 YspA SLOG family APS55_RS06725 IPR007793 DivIVA family APS55_RS06725 IPR011229 Cell cycle protein GpsB APS55_RS06725 IPR019933 DivIVA domain APS55_RS06735 IPR002052 DNA methylase, N-6 adenine-specific, conserved site APS55_RS06735 IPR000241 Putative RNA methylase domain APS55_RS06735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS06735 IPR004114 THUMP domain APS55_RS06740 IPR036188 FAD/NAD(P)-binding domain superfamily APS55_RS06740 IPR006076 FAD dependent oxidoreductase APS55_RS06745 IPR036397 Ribonuclease H superfamily APS55_RS06745 IPR012337 Ribonuclease H-like superfamily APS55_RS06745 IPR002156 Ribonuclease H domain APS55_RS06755 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site APS55_RS06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06755 IPR000559 Formate-tetrahydrofolate ligase, FTHFS APS55_RS06760 IPR001872 Peptidase A8, signal peptidase II APS55_RS06765 IPR020103 Pseudouridine synthase, catalytic domain superfamily APS55_RS06765 IPR006225 Pseudouridine synthase, RluC/RluD APS55_RS06765 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site APS55_RS06765 IPR006145 Pseudouridine synthase, RsuA/RluA APS55_RS06765 IPR036986 RNA-binding S4 domain superfamily APS55_RS06765 IPR002942 RNA-binding S4 domain APS55_RS06770 IPR000836 Phosphoribosyltransferase domain APS55_RS06770 IPR029057 Phosphoribosyltransferase-like APS55_RS06770 IPR023050 Bifunctional protein PyrR APS55_RS06775 IPR006274 Carbamoyl-phosphate synthase, small subunit APS55_RS06775 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain APS55_RS06775 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily APS55_RS06775 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain APS55_RS06775 IPR017926 Glutamine amidotransferase APS55_RS06775 IPR029062 Class I glutamine amidotransferase-like APS55_RS06780 IPR011761 ATP-grasp fold APS55_RS06780 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS06780 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain APS55_RS06780 IPR006275 Carbamoyl-phosphate synthase, large subunit APS55_RS06780 IPR036914 Methylglyoxal synthase-like domain superfamily APS55_RS06780 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily APS55_RS06780 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain APS55_RS06780 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain APS55_RS06780 IPR011607 Methylglyoxal synthase-like domain APS55_RS06780 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain APS55_RS06800 IPR036249 Thioredoxin-like superfamily APS55_RS06800 IPR029759 Glutathione peroxidase active site APS55_RS06800 IPR000889 Glutathione peroxidase APS55_RS06800 IPR029760 Glutathione peroxidase conserved site APS55_RS06815 IPR003797 DegV APS55_RS06820 IPR008532 NFACT, RNA-binding domain APS55_RS06830 IPR018524 DNA/RNA non-specific endonuclease, active site APS55_RS06830 IPR001604 DNA/RNA non-specific endonuclease APS55_RS06835 IPR002569 Peptide methionine sulphoxide reductase MsrA APS55_RS06835 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily APS55_RS06840 IPR011057 Mss4-like superfamily APS55_RS06840 IPR002579 Peptide methionine sulphoxide reductase MrsB APS55_RS06840 IPR028427 Peptide methionine sulfoxide reductase APS55_RS06850 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable APS55_RS06850 IPR001667 DDH domain APS55_RS06850 IPR038763 DHH phosphoesterase superfamily APS55_RS06850 IPR004097 DHHA2 domain APS55_RS06850 IPR038222 DHHA2 domain superfamily APS55_RS06855 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06855 IPR000847 Transcription regulator HTH, LysR APS55_RS06855 IPR005119 LysR, substrate-binding APS55_RS06855 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain APS55_RS06855 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS06860 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat APS55_RS06860 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APS55_RS06860 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APS55_RS06860 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily APS55_RS06860 IPR005741 DNA topoisomerase IV subunit A, Gram-positive APS55_RS06860 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal APS55_RS06860 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta APS55_RS06865 IPR006171 TOPRIM domain APS55_RS06865 IPR018522 DNA topoisomerase, type IIA, conserved site APS55_RS06865 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 APS55_RS06865 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal APS55_RS06865 IPR013760 DNA topoisomerase, type IIA-like domain superfamily APS55_RS06865 IPR002288 DNA gyrase B subunit, C-terminal APS55_RS06865 IPR001241 DNA topoisomerase, type IIA APS55_RS06865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS06865 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS06865 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes APS55_RS06865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS06865 IPR003594 Histidine kinase/HSP90-like ATPase APS55_RS06870 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY APS55_RS06875 IPR003660 HAMP domain APS55_RS06875 IPR005467 Histidine kinase domain APS55_RS06875 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain APS55_RS06875 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily APS55_RS06875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal APS55_RS06875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS06875 IPR041610 ArlS, sensor domain APS55_RS06875 IPR003594 Histidine kinase/HSP90-like ATPase APS55_RS06880 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06880 IPR039420 Transcriptional regulatory protein WalR-like APS55_RS06880 IPR001789 Signal transduction response regulator, receiver domain APS55_RS06880 IPR016032 Signal transduction response regulator, C-terminal effector APS55_RS06880 IPR011006 CheY-like superfamily APS55_RS06880 IPR001867 OmpR/PhoB-type DNA-binding domain APS55_RS06885 IPR011332 Zinc-binding ribosomal protein APS55_RS06885 IPR002677 Ribosomal protein L32p APS55_RS06895 IPR008513 tRNA(Met) cytidine acetate ligase APS55_RS06895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS06900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS06900 IPR041698 Methyltransferase domain 25 APS55_RS06905 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APS55_RS06910 IPR003607 HD/PDEase domain APS55_RS06910 IPR006674 HD domain APS55_RS06910 IPR005249 Conserved hypothetical protein CHP00488 APS55_RS06915 IPR004821 Cytidyltransferase-like domain APS55_RS06915 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase APS55_RS06915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS06920 IPR035920 YhbY-like superfamily APS55_RS06920 IPR017924 RNA-binding protein YhbY APS55_RS06920 IPR001890 RNA-binding, CRM domain APS55_RS06925 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain APS55_RS06925 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH APS55_RS06925 IPR006073 GTP binding domain APS55_RS06925 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06935 IPR005813 Ribosomal protein L20 APS55_RS06935 IPR035566 Ribosomal protein L20, C-terminal APS55_RS06940 IPR021137 Ribosomal protein L35 APS55_RS06940 IPR018265 Ribosomal protein L35, conserved site APS55_RS06940 IPR037229 Ribosomal protein L35 superfamily APS55_RS06940 IPR001706 Ribosomal protein L35, non-mitochondrial APS55_RS06945 IPR001288 Translation initiation factor 3 APS55_RS06945 IPR019814 Translation initiation factor 3, N-terminal APS55_RS06945 IPR019815 Translation initiation factor 3, C-terminal APS55_RS06945 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily APS55_RS06945 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily APS55_RS06945 IPR019813 Translation initiation factor 3, conserved site APS55_RS06950 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APS55_RS06950 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APS55_RS06950 IPR002320 Threonine-tRNA ligase, class IIa APS55_RS06950 IPR012676 TGS-like APS55_RS06950 IPR004095 TGS APS55_RS06950 IPR012675 Beta-grasp domain superfamily APS55_RS06950 IPR036621 Anticodon-binding domain superfamily APS55_RS06950 IPR004154 Anticodon-binding APS55_RS06950 IPR006195 Aminoacyl-tRNA synthetase, class II APS55_RS06950 IPR033728 Threonine-tRNA ligase catalytic core domain APS55_RS06950 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) APS55_RS06955 IPR002611 IstB-like ATP-binding protein APS55_RS06955 IPR003593 AAA+ ATPase domain APS55_RS06955 IPR009928 Primosomal DnaI, N-terminal APS55_RS06955 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06960 IPR006343 DnaD domain APS55_RS06965 IPR003796 Ribonucleotide reductase regulator NrdR-like APS55_RS06965 IPR005144 ATP-cone domain APS55_RS06970 IPR001977 Dephospho-CoA kinase APS55_RS06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06975 IPR010663 Zinc finger, FPG/IleRS-type APS55_RS06975 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type APS55_RS06975 IPR010979 Ribosomal protein S13-like, H2TH APS55_RS06975 IPR035937 MutM-like, N-terminal APS55_RS06975 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain APS55_RS06975 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding APS55_RS06975 IPR020629 Formamidopyrimidine-DNA glycosylase APS55_RS06980 IPR029060 PIN-like domain superfamily APS55_RS06980 IPR036397 Ribonuclease H superfamily APS55_RS06980 IPR002562 3'-5' exonuclease domain APS55_RS06980 IPR036279 5'-3' exonuclease, C-terminal domain superfamily APS55_RS06980 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal APS55_RS06980 IPR002298 DNA polymerase A APS55_RS06980 IPR002421 5'-3' exonuclease, N-terminal APS55_RS06980 IPR018320 DNA polymerase 1 APS55_RS06980 IPR020045 DNA polymerase I-like, H3TH domain APS55_RS06980 IPR001098 DNA-directed DNA polymerase, family A, palm domain APS55_RS06980 IPR019760 DNA-directed DNA polymerase, family A, conserved site APS55_RS06980 IPR008918 Helix-hairpin-helix motif, class 2 APS55_RS06980 IPR012337 Ribonuclease H-like superfamily APS55_RS06985 IPR006214 Bax inhibitor 1-related APS55_RS06990 IPR000713 Mur ligase, N-terminal catalytic domain APS55_RS06990 IPR013221 Mur ligase, central APS55_RS06990 IPR005758 UDP-N-acetylmuramate--L-alanine ligase APS55_RS06990 IPR036565 Mur-like, catalytic domain superfamily APS55_RS06990 IPR004101 Mur ligase, C-terminal APS55_RS06990 IPR036615 Mur ligase, C-terminal domain superfamily APS55_RS06995 IPR041027 FtsK alpha domain APS55_RS06995 IPR018541 FtsK gamma domain APS55_RS06995 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS06995 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS06995 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS06995 IPR003593 AAA+ ATPase domain APS55_RS06995 IPR002543 FtsK domain APS55_RS07000 IPR012340 Nucleic acid-binding, OB-fold APS55_RS07000 IPR037154 YtpR-like superfamily APS55_RS07000 IPR002547 tRNA-binding domain APS55_RS07000 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain APS55_RS07000 IPR027855 Domain of unknown function DUF4479 APS55_RS07005 IPR013766 Thioredoxin domain APS55_RS07005 IPR036249 Thioredoxin-like superfamily APS55_RS07010 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type APS55_RS07010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07020 IPR003439 ABC transporter-like APS55_RS07020 IPR003593 AAA+ ATPase domain APS55_RS07025 IPR039384 HINT family APS55_RS07025 IPR019808 Histidine triad, conserved site APS55_RS07025 IPR036265 HIT-like superfamily APS55_RS07025 IPR011146 HIT-like domain APS55_RS07025 IPR001310 Histidine triad (HIT) protein APS55_RS07035 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type APS55_RS07035 IPR023059 Foldase protein PrsA APS55_RS07035 IPR027304 Trigger factor/SurA domain superfamily APS55_RS07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07040 IPR038734 Uncharacterized protein YhaN, AAA domain APS55_RS07045 IPR014576 Predicted phosphoesterase, YhaO type APS55_RS07045 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type APS55_RS07045 IPR029052 Metallo-dependent phosphatase-like APS55_RS07045 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain APS55_RS07050 IPR001264 Glycosyl transferase, family 51 APS55_RS07050 IPR001460 Penicillin-binding protein, transpeptidase APS55_RS07050 IPR036950 Penicillin binding protein transglycosylase domain APS55_RS07050 IPR023346 Lysozyme-like domain superfamily APS55_RS07050 IPR012338 Beta-lactamase/transpeptidase-like APS55_RS07055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS07055 IPR008909 DALR anticodon binding APS55_RS07055 IPR035684 Arginyl-tRNA synthetase, catalytic core domain APS55_RS07055 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily APS55_RS07055 IPR005148 Arginyl tRNA synthetase N-terminal domain APS55_RS07055 IPR001278 Arginine-tRNA ligase APS55_RS07055 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APS55_RS07070 IPR001557 L-lactate/malate dehydrogenase APS55_RS07070 IPR022383 Lactate/malate dehydrogenase, C-terminal APS55_RS07070 IPR036291 NAD(P)-binding domain superfamily APS55_RS07070 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal APS55_RS07070 IPR018177 L-lactate dehydrogenase, active site APS55_RS07070 IPR001236 Lactate/malate dehydrogenase, N-terminal APS55_RS07080 IPR015942 Asp/Glu/hydantoin racemase APS55_RS07080 IPR001920 Asp/Glu racemase APS55_RS07080 IPR004380 Aspartate racemase APS55_RS07080 IPR018187 Asp/Glu racemase, active site 1 APS55_RS07080 IPR033134 Asp/Glu racemase, active site 2 APS55_RS07085 IPR011761 ATP-grasp fold APS55_RS07090 IPR036615 Mur ligase, C-terminal domain superfamily APS55_RS07090 IPR004101 Mur ligase, C-terminal APS55_RS07090 IPR036565 Mur-like, catalytic domain superfamily APS55_RS07090 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase APS55_RS07090 IPR035911 MurE/MurF, N-terminal APS55_RS07090 IPR013221 Mur ligase, central APS55_RS07095 IPR033738 Asparagine synthase, N-terminal domain APS55_RS07095 IPR001962 Asparagine synthase APS55_RS07095 IPR006426 Asparagine synthase, glutamine-hydrolyzing APS55_RS07095 IPR017932 Glutamine amidotransferase type 2 domain APS55_RS07095 IPR029055 Nucleophile aminohydrolases, N-terminal APS55_RS07100 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07100 IPR003439 ABC transporter-like APS55_RS07100 IPR041102 UvrA, interaction domain APS55_RS07100 IPR041552 UvrA DNA-binding domain APS55_RS07100 IPR004602 UvrABC system subunit A APS55_RS07100 IPR017871 ABC transporter, conserved site APS55_RS07115 IPR001185 Large-conductance mechanosensitive channel APS55_RS07115 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L APS55_RS07115 IPR019823 Large-conductance mechanosensitive channel, conserved site APS55_RS07115 IPR036019 Gated mechanosensitive channel APS55_RS07120 IPR002624 Deoxynucleoside kinase APS55_RS07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07120 IPR031314 Deoxynucleoside kinase domain APS55_RS07125 IPR036264 Bacterial exopeptidase dimerisation domain APS55_RS07125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site APS55_RS07125 IPR010964 Peptidase M20A, peptidase V-related APS55_RS07125 IPR011291 Peptidase M20A, peptidase V APS55_RS07125 IPR002933 Peptidase M20 APS55_RS07130 IPR017953 Carbohydrate kinase, predicted, conserved site APS55_RS07130 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase APS55_RS07130 IPR029056 Ribokinase-like APS55_RS07140 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type APS55_RS07140 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APS55_RS07140 IPR002797 Polysaccharide biosynthesis protein APS55_RS07145 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS07145 IPR002300 Aminoacyl-tRNA synthetase, class Ia APS55_RS07145 IPR002302 Leucine-tRNA ligase APS55_RS07145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS07145 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APS55_RS07145 IPR015413 Methionyl/Leucyl tRNA synthetase APS55_RS07145 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APS55_RS07145 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APS55_RS07145 IPR025709 Leucyl-tRNA synthetase, editing domain APS55_RS07150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS07150 IPR010719 Putative rRNA methylase APS55_RS07155 IPR004638 Drug resistance transporter EmrB-like APS55_RS07155 IPR011701 Major facilitator superfamily APS55_RS07155 IPR020846 Major facilitator superfamily domain APS55_RS07155 IPR036259 MFS transporter superfamily APS55_RS07155 IPR005829 Sugar transporter, conserved site APS55_RS07160 IPR022631 S-adenosylmethionine synthetase, conserved site APS55_RS07160 IPR022630 S-adenosylmethionine synthetase, C-terminal APS55_RS07160 IPR022629 S-adenosylmethionine synthetase, central domain APS55_RS07160 IPR022628 S-adenosylmethionine synthetase, N-terminal APS55_RS07160 IPR022636 S-adenosylmethionine synthetase superfamily APS55_RS07160 IPR002133 S-adenosylmethionine synthetase APS55_RS07240 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain APS55_RS07240 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site APS55_RS07240 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase APS55_RS07240 IPR029000 Cyclophilin-like domain superfamily APS55_RS07245 IPR032818 DedA family APS55_RS07245 IPR032816 SNARE associated Golgi protein APS55_RS07255 IPR036397 Ribonuclease H superfamily APS55_RS07255 IPR012337 Ribonuclease H-like superfamily APS55_RS07255 IPR001584 Integrase, catalytic core APS55_RS07255 IPR038965 Transposase InsF-like APS55_RS07265 IPR036412 HAD-like superfamily APS55_RS07265 IPR023214 HAD superfamily APS55_RS07265 IPR006357 HAD-superfamily hydrolase, subfamily IIA APS55_RS07265 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 APS55_RS07270 IPR038141 YutD-like superfamily APS55_RS07270 IPR009370 Protein of unknown function DUF1027 APS55_RS07275 IPR008334 5'-Nucleotidase, C-terminal APS55_RS07275 IPR029052 Metallo-dependent phosphatase-like APS55_RS07275 IPR036907 5'-Nucleotidase, C-terminal domain superfamily APS55_RS07275 IPR006179 5'-Nucleotidase/apyrase APS55_RS07275 IPR011240 Phosphoesterase-related protein YunD APS55_RS07285 IPR004840 Amino acid permease, conserved site APS55_RS07285 IPR004841 Amino acid permease/ SLC12A domain APS55_RS07290 IPR004372 Acetate/propionate kinase APS55_RS07290 IPR000890 Aliphatic acid kinase, short-chain APS55_RS07290 IPR023865 Aliphatic acid kinase, short-chain, conserved site APS55_RS07295 IPR003356 DNA methylase, adenine-specific APS55_RS07295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS07295 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted APS55_RS07315 IPR000983 Bacterial general secretion pathway protein G-type pilin APS55_RS07315 IPR016940 ComG operon protein C APS55_RS07315 IPR012902 Prokaryotic N-terminal methylation site APS55_RS07325 IPR001482 Type II/IV secretion system protein APS55_RS07325 IPR003593 AAA+ ATPase domain APS55_RS07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07330 IPR017856 Integrase-like, N-terminal APS55_RS07330 IPR029072 YebC-like APS55_RS07330 IPR026564 Transcriptional regulator TACO1-like, domain 3 APS55_RS07330 IPR002876 Transcriptional regulator TACO1-like APS55_RS07335 IPR028082 Periplasmic binding protein-like I APS55_RS07335 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APS55_RS07335 IPR006377 Catabolite control protein A APS55_RS07335 IPR000843 LacI-type HTH domain APS55_RS07350 IPR002637 Ham1-like protein APS55_RS07350 IPR020922 dITP/XTP pyrophosphatase APS55_RS07350 IPR029001 Inosine triphosphate pyrophosphatase-like APS55_RS07355 IPR033134 Asp/Glu racemase, active site 2 APS55_RS07355 IPR018187 Asp/Glu racemase, active site 1 APS55_RS07355 IPR001920 Asp/Glu racemase APS55_RS07355 IPR015942 Asp/Glu/hydantoin racemase APS55_RS07355 IPR004391 Glutamate racemase APS55_RS07360 IPR019642 Protein of unknown function DUF2507 APS55_RS07360 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily APS55_RS07365 IPR036249 Thioredoxin-like superfamily APS55_RS07365 IPR017937 Thioredoxin, conserved site APS55_RS07365 IPR005746 Thioredoxin APS55_RS07365 IPR013766 Thioredoxin domain APS55_RS07370 IPR007696 DNA mismatch repair protein MutS, core APS55_RS07370 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07370 IPR036187 DNA mismatch repair protein MutS, core domain superfamily APS55_RS07370 IPR002625 Smr domain APS55_RS07370 IPR036063 Smr domain superfamily APS55_RS07370 IPR005747 Endonuclease MutS2 APS55_RS07370 IPR000432 DNA mismatch repair protein MutS, C-terminal APS55_RS07385 IPR009711 Uncharacterised protein family UPF0473 APS55_RS07390 IPR012337 Ribonuclease H-like superfamily APS55_RS07390 IPR005227 Putative pre-16S rRNA nuclease APS55_RS07390 IPR006641 YqgF/RNase H-like domain APS55_RS07390 IPR037027 YqgF/RNase H-like domain superfamily APS55_RS07395 IPR009309 IreB regulatory phosphoprotein APS55_RS07400 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily APS55_RS07400 IPR002318 Alanine-tRNA ligase, class IIc APS55_RS07400 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily APS55_RS07400 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal APS55_RS07400 IPR012947 Threonyl/alanyl tRNA synthetase, SAD APS55_RS07400 IPR003156 DHHA1 domain APS55_RS07400 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain APS55_RS07400 IPR009000 Translation protein, beta-barrel domain superfamily APS55_RS07400 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria APS55_RS07405 IPR001650 Helicase, C-terminal APS55_RS07405 IPR011545 DEAD/DEAH box helicase domain APS55_RS07405 IPR030881 DEAD-box ATP-dependent RNA helicase CshB APS55_RS07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07405 IPR014014 RNA helicase, DEAD-box type, Q motif APS55_RS07405 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS55_RS07410 IPR003156 DHHA1 domain APS55_RS07410 IPR038763 DHH phosphoesterase superfamily APS55_RS07410 IPR001667 DDH domain APS55_RS07415 IPR003849 Preprotein translocase YajC APS55_RS07420 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07420 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS07420 IPR003593 AAA+ ATPase domain APS55_RS07420 IPR004605 DNA helicase, Holliday junction RuvB-type APS55_RS07420 IPR041445 RuvB, AAA lid domain APS55_RS07420 IPR008823 RuvB C-terminal winged helix domain APS55_RS07420 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS07420 IPR008824 RuvB-like P-loop domain APS55_RS07425 IPR000085 Bacterial DNA recombination protein RuvA APS55_RS07425 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 APS55_RS07425 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial APS55_RS07425 IPR012340 Nucleic acid-binding, OB-fold APS55_RS07425 IPR010994 RuvA domain 2-like APS55_RS07425 IPR011114 Holliday junction DNA helicase RuvA, C-terminal APS55_RS07425 IPR036267 RuvA, C-terminal domain superfamily APS55_RS07430 IPR014762 DNA mismatch repair, conserved site APS55_RS07430 IPR020667 DNA mismatch repair protein, MutL APS55_RS07430 IPR002099 DNA mismatch repair protein family, N-terminal APS55_RS07430 IPR037198 MutL, C-terminal domain superfamily APS55_RS07430 IPR042121 MutL, C-terminal domain, regulatory subdomain APS55_RS07430 IPR014790 MutL, C-terminal, dimerisation APS55_RS07430 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms APS55_RS07430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APS55_RS07430 IPR013507 DNA mismatch repair protein, S5 domain 2-like APS55_RS07430 IPR020568 Ribosomal protein S5 domain 2-type fold APS55_RS07430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS55_RS07430 IPR042120 MutL, C-terminal domain, dimerisation subdomain APS55_RS07435 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07435 IPR036678 MutS, connector domain superfamily APS55_RS07435 IPR007860 DNA mismatch repair protein MutS, connector domain APS55_RS07435 IPR036187 DNA mismatch repair protein MutS, core domain superfamily APS55_RS07435 IPR016151 DNA mismatch repair protein MutS, N-terminal APS55_RS07435 IPR007696 DNA mismatch repair protein MutS, core APS55_RS07435 IPR007861 DNA mismatch repair protein MutS, clamp APS55_RS07435 IPR000432 DNA mismatch repair protein MutS, C-terminal APS55_RS07435 IPR005748 DNA mismatch repair protein MutS APS55_RS07435 IPR017261 DNA mismatch repair protein MutS/MSH APS55_RS07435 IPR007695 DNA mismatch repair protein MutS-like, N-terminal APS55_RS07440 IPR029052 Metallo-dependent phosphatase-like APS55_RS07440 IPR005235 Metallophosphoesterase, YmdB-like APS55_RS07445 IPR004088 K Homology domain, type 1 APS55_RS07445 IPR004087 K Homology domain APS55_RS07445 IPR003607 HD/PDEase domain APS55_RS07445 IPR006674 HD domain APS55_RS07445 IPR006675 HDIG domain APS55_RS07445 IPR022711 Ribonuclease Y, N-terminal APS55_RS07445 IPR017705 Ribonuclease Y APS55_RS07445 IPR036612 K Homology domain, type 1 superfamily APS55_RS07450 IPR023400 DNA recombination and repair protein RecA, C-terminal APS55_RS07450 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface APS55_RS07450 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07450 IPR020584 DNA recombination/repair protein RecA, conserved site APS55_RS07450 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain APS55_RS07450 IPR003593 AAA+ ATPase domain APS55_RS07450 IPR013765 DNA recombination and repair protein RecA APS55_RS07455 IPR001453 MoaB/Mog domain APS55_RS07455 IPR036425 MoaB/Mog-like domain superfamily APS55_RS07455 IPR036653 CinA-like, C-terminal APS55_RS07455 IPR008136 CinA, C-terminal APS55_RS07455 IPR008135 Competence-induced protein CinA APS55_RS07455 IPR041424 CinA, KH domain APS55_RS07460 IPR000462 CDP-alcohol phosphatidyltransferase APS55_RS07460 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase APS55_RS07465 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APS55_RS07465 IPR025194 Domain of unknown function DUF4115 APS55_RS07470 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like APS55_RS07470 IPR011765 Peptidase M16, N-terminal APS55_RS07470 IPR007863 Peptidase M16, C-terminal APS55_RS07480 IPR018313 Solute-binding protein family 3, conserved site APS55_RS07480 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APS55_RS07485 IPR003593 AAA+ ATPase domain APS55_RS07485 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07485 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type APS55_RS07485 IPR017871 ABC transporter, conserved site APS55_RS07485 IPR003439 ABC transporter-like APS55_RS07490 IPR035906 MetI-like superfamily APS55_RS07490 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain APS55_RS07490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS07495 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07495 IPR025501 ATP binding protein MinD APS55_RS07495 IPR010223 ATP binding protein MinD, bacterial-type APS55_RS07495 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APS55_RS07500 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal APS55_RS07500 IPR005526 Septum formation inhibitor MinC, C-terminal APS55_RS07500 IPR013033 Septum formation inhibitor MinC APS55_RS07500 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily APS55_RS07510 IPR007221 Rod shape-determining protein MreC APS55_RS07510 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 APS55_RS07510 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 APS55_RS07515 IPR004753 Cell shape determining protein MreB APS55_RS07520 IPR018109 Folylpolyglutamate synthetase, conserved site APS55_RS07520 IPR001645 Folylpolyglutamate synthetase APS55_RS07520 IPR036615 Mur ligase, C-terminal domain superfamily APS55_RS07520 IPR013221 Mur ligase, central APS55_RS07520 IPR036565 Mur-like, catalytic domain superfamily APS55_RS07520 IPR004101 Mur ligase, C-terminal APS55_RS07525 IPR033705 Valyl tRNA synthetase, anticodon-binding domain APS55_RS07525 IPR002300 Aminoacyl-tRNA synthetase, class Ia APS55_RS07525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS07525 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm APS55_RS07525 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding APS55_RS07525 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily APS55_RS07525 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm APS55_RS07525 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain APS55_RS07525 IPR002303 Valine-tRNA ligase APS55_RS07525 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding APS55_RS07525 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site APS55_RS07530 IPR013740 Redoxin APS55_RS07530 IPR036249 Thioredoxin-like superfamily APS55_RS07530 IPR018219 Thiol peroxidase conserved site APS55_RS07530 IPR002065 Thiol peroxidase Tpx APS55_RS07530 IPR013766 Thioredoxin domain APS55_RS07535 IPR003720 tRNA sulfurtransferase ThiI APS55_RS07535 IPR020536 Thil, AANH domain APS55_RS07535 IPR004114 THUMP domain APS55_RS07535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS07540 IPR016454 Cysteine desulfurase APS55_RS07540 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APS55_RS07540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain APS55_RS07540 IPR000192 Aminotransferase class V domain APS55_RS07540 IPR015424 Pyridoxal phosphate-dependent transferase APS55_RS07540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 APS55_RS07545 IPR010379 Septation ring formation regulator EzrA APS55_RS07550 IPR000614 Free Met sulfoxide reductase conserved site APS55_RS07550 IPR029016 GAF-like domain superfamily APS55_RS07550 IPR003018 GAF domain APS55_RS07555 IPR022801 Ribosomal protein S4/S9 APS55_RS07555 IPR002942 RNA-binding S4 domain APS55_RS07555 IPR001912 Ribosomal protein S4/S9, N-terminal APS55_RS07555 IPR005709 Ribosomal protein S4, bacterial-type APS55_RS07555 IPR018079 Ribosomal protein S4, conserved site APS55_RS07555 IPR036986 RNA-binding S4 domain superfamily APS55_RS07565 IPR008824 RuvB-like P-loop domain APS55_RS07565 IPR003593 AAA+ ATPase domain APS55_RS07565 IPR032423 AAA C-terminal domain APS55_RS07565 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07565 IPR021886 MgsA AAA+ ATPase C-terminal APS55_RS07565 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal APS55_RS07575 IPR006016 UspA APS55_RS07575 IPR006015 Universal stress protein A family APS55_RS07575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS07585 IPR025777 GMP synthetase ATP pyrophosphatase domain APS55_RS07585 IPR029062 Class I glutamine amidotransferase-like APS55_RS07585 IPR005019 Methyladenine glycosylase APS55_RS07585 IPR016181 Acyl-CoA N-acyltransferase APS55_RS07585 IPR001674 GMP synthase, C-terminal APS55_RS07585 IPR011257 DNA glycosylase APS55_RS07585 IPR017926 Glutamine amidotransferase APS55_RS07585 IPR000182 GNAT domain APS55_RS07585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS55_RS07590 IPR013815 ATP-grasp fold, subdomain 1 APS55_RS07590 IPR011761 ATP-grasp fold APS55_RS07590 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site APS55_RS07590 IPR011127 D-alanine--D-alanine ligase, N-terminal domain APS55_RS07590 IPR016185 Pre-ATP-grasp domain superfamily APS55_RS07590 IPR005905 D-alanine--D-alanine ligase APS55_RS07590 IPR011095 D-alanine--D-alanine ligase, C-terminal APS55_RS07600 IPR017871 ABC transporter, conserved site APS55_RS07600 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07600 IPR003439 ABC transporter-like APS55_RS07600 IPR003593 AAA+ ATPase domain APS55_RS07605 IPR000524 Transcription regulator HTH, GntR APS55_RS07605 IPR036388 Winged helix-like DNA-binding domain superfamily APS55_RS07605 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily APS55_RS07605 IPR036390 Winged helix DNA-binding domain superfamily APS55_RS07605 IPR011663 UbiC transcription regulator-associated APS55_RS07610 IPR004872 Lipoprotein NlpA family APS55_RS07615 IPR035906 MetI-like superfamily APS55_RS07615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like APS55_RS07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07620 IPR018449 NIL domain APS55_RS07620 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain APS55_RS07620 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal APS55_RS07620 IPR017871 ABC transporter, conserved site APS55_RS07620 IPR003593 AAA+ ATPase domain APS55_RS07620 IPR003439 ABC transporter-like APS55_RS07625 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB APS55_RS07625 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA APS55_RS07625 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site APS55_RS07635 IPR004753 Cell shape determining protein MreB APS55_RS07640 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta APS55_RS07640 IPR001986 Enolpyruvate transferase domain APS55_RS07640 IPR036968 Enolpyruvate transferase domain superfamily APS55_RS07640 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase APS55_RS07650 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal APS55_RS07650 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily APS55_RS07650 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit APS55_RS07650 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APS55_RS07650 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal APS55_RS07655 IPR003593 AAA+ ATPase domain APS55_RS07655 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain APS55_RS07655 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site APS55_RS07655 IPR005722 ATP synthase, F1 complex, beta subunit APS55_RS07655 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal APS55_RS07655 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain APS55_RS07655 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS55_RS07655 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily APS55_RS07660 IPR000131 ATP synthase, F1 complex, gamma subunit APS55_RS07660 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily APS55_RS07690 IPR002696 Putative membrane protein insertion efficiency factor APS55_RS07715 IPR010982 Lambda repressor-like, DNA-binding domain superfamily APS55_RS07715 IPR001387 Cro/C1-type helix-turn-helix domain APS55_RS07810 IPR007353 Protein of unknown function DUF421 APS55_RS07810 IPR023090 UPF0702, alpha/beta domain superfamily APS55_RS07815 IPR012337 Ribonuclease H-like superfamily APS55_RS07815 IPR002156 Ribonuclease H domain APS55_RS07815 IPR022892 Ribonuclease HI APS55_RS07815 IPR036397 Ribonuclease H superfamily APS55_RS07845 IPR002696 Putative membrane protein insertion efficiency factor APS55_RS07855 IPR034332 Uracil phosphoribosyltransferase, bacterial-type APS55_RS07855 IPR005765 Uracil phosphoribosyl transferase APS55_RS07855 IPR000836 Phosphoribosyltransferase domain APS55_RS07855 IPR029057 Phosphoribosyltransferase-like APS55_RS07875 IPR042195 ArgJ beta chain, C-terminal domain APS55_RS07875 IPR016117 ArgJ-like domain superfamily APS55_RS07875 IPR002813 Arginine biosynthesis protein ArgJ APS55_RS07880 IPR036291 NAD(P)-binding domain superfamily APS55_RS07880 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site APS55_RS07880 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 APS55_RS07880 IPR012280 Semialdehyde dehydrogenase, dimerisation domain APS55_RS07880 IPR000534 Semialdehyde dehydrogenase, NAD-binding APS55_RS07890 IPR001584 Integrase, catalytic core APS55_RS07890 IPR025948 HTH-like domain APS55_RS07890 IPR036397 Ribonuclease H superfamily APS55_RS07890 IPR012337 Ribonuclease H-like superfamily APS55_RS07890 IPR038965 Transposase InsF-like APS55_RS07895 IPR036397 Ribonuclease H superfamily APS55_RS07895 IPR001584 Integrase, catalytic core APS55_RS07895 IPR012337 Ribonuclease H-like superfamily APS55_RS07895 IPR038965 Transposase InsF-like APS55_RS07990 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal APS55_RS07990 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site APS55_RS07990 IPR023165 rRNA adenine dimethylase-like APS55_RS07990 IPR011530 Ribosomal RNA adenine dimethylase APS55_RS07990 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APS55_RS07990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS55_RS07995 IPR004466 Ribonuclease M5 APS55_RS07995 IPR025156 Ribonuclease M5, C-terminal domain APS55_RS07995 IPR006171 TOPRIM domain APS55_RS07995 IPR034141 Ribonuclease M5-like, TOPRIM domain