locus-tag class description APS55_RS00015 PF00005 ABC transporter APS55_RS00020 PF03180 NLPA lipoprotein APS55_RS00025 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS00030 PF09383 NIL domain APS55_RS00030 PF00005 ABC transporter APS55_RS00035 PF01098 Cell cycle protein APS55_RS00050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS55_RS00060 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain APS55_RS00060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS55_RS00065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS55_RS00065 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS55_RS00070 PF00231 ATP synthase APS55_RS00075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS55_RS00075 PF00306 ATP synthase alpha/beta chain, C terminal domain APS55_RS00075 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS55_RS00080 PF00213 ATP synthase delta (OSCP) subunit APS55_RS00085 PF00430 ATP synthase B/B' CF(0) APS55_RS00090 PF00137 ATP synthase subunit C APS55_RS00095 PF00119 ATP synthase A chain APS55_RS00105 PF00464 Serine hydroxymethyltransferase APS55_RS00110 PF01300 Telomere recombination APS55_RS00110 PF03481 Putative GTP-binding controlling metal-binding APS55_RS00115 PF17827 PrmC N-terminal domain APS55_RS00115 PF05175 Methyltransferase small domain APS55_RS00120 PF00472 RF-1 domain APS55_RS00120 PF03462 PCRF domain APS55_RS00125 PF00265 Thymidine kinase APS55_RS00130 PF08245 Mur ligase middle domain APS55_RS00130 PF08353 Domain of unknown function (DUF1727) APS55_RS00135 PF07685 CobB/CobQ-like glutamine amidotransferase domain APS55_RS00140 PF00144 Beta-lactamase APS55_RS00145 PF00664 ABC transporter transmembrane region APS55_RS00145 PF00005 ABC transporter APS55_RS00150 PF00005 ABC transporter APS55_RS00150 PF00664 ABC transporter transmembrane region APS55_RS00165 PF00857 Isochorismatase family APS55_RS00175 PF06993 Protein of unknown function (DUF1304) APS55_RS00350 PF01555 DNA methylase APS55_RS00400 PF01695 IstB-like ATP binding protein APS55_RS00410 PF00436 Single-strand binding protein family APS55_RS00465 PF01726 LexA DNA binding domain APS55_RS00465 PF00717 Peptidase S24-like APS55_RS00535 PF01464 Transglycosylase SLT domain APS55_RS00550 PF13333 Integrase core domain APS55_RS00550 PF00665 Integrase core domain APS55_RS00565 PF00698 Acyl transferase domain APS55_RS00565 PF14765 Polyketide synthase dehydratase APS55_RS00565 PF00550 Phosphopantetheine attachment site APS55_RS00565 PF08659 KR domain APS55_RS00565 PF08240 Alcohol dehydrogenase GroES-like domain APS55_RS00570 PF14552 Tautomerase enzyme APS55_RS00575 PF01336 OB-fold nucleic acid binding domain APS55_RS00575 PF00152 tRNA synthetases class II (D, K and N) APS55_RS00580 PF02525 Flavodoxin-like fold APS55_RS00585 PF13276 HTH-like domain APS55_RS00585 PF00665 Integrase core domain APS55_RS00585 PF13333 Integrase core domain APS55_RS00605 PF06800 Sugar transport protein APS55_RS00615 PF07690 Major Facilitator Superfamily APS55_RS00630 PF02705 K+ potassium transporter APS55_RS00635 PF00155 Aminotransferase class I and II APS55_RS00650 PF00005 ABC transporter APS55_RS00655 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APS55_RS00655 PF01476 LysM domain APS55_RS00660 PF01380 SIS domain APS55_RS00665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS55_RS00665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS55_RS00665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS55_RS00665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS55_RS00670 PF07949 YbbR-like protein APS55_RS00675 PF02457 DisA bacterial checkpoint controller nucleotide-binding APS55_RS00685 PF00999 Sodium/hydrogen exchanger family APS55_RS00690 PF01565 FAD binding domain APS55_RS00690 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APS55_RS00695 PF14480 DNA polymerase III polC-type N-terminus I APS55_RS00695 PF02811 PHP domain APS55_RS00695 PF11490 DNA polymerase III polC-type N-terminus II APS55_RS00695 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS55_RS00695 PF00929 Exonuclease APS55_RS00695 PF14579 Helix-hairpin-helix motif APS55_RS00695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS55_RS00705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS55_RS00710 PF01515 Phosphate acetyl/butaryl transferase APS55_RS00715 PF03167 Uracil DNA glycosylase superfamily APS55_RS00720 PF01668 SmpB protein APS55_RS00725 PF00575 S1 RNA binding domain APS55_RS00725 PF00773 RNB domain APS55_RS00725 PF08206 Ribonuclease B OB domain APS55_RS00725 PF17876 Cold shock domain APS55_RS00730 PF03840 Preprotein translocase SecG subunit APS55_RS00735 PF00654 Voltage gated chloride channel APS55_RS00740 PF00113 Enolase, C-terminal TIM barrel domain APS55_RS00740 PF03952 Enolase, N-terminal domain APS55_RS00745 PF00121 Triosephosphate isomerase APS55_RS00750 PF00162 Phosphoglycerate kinase APS55_RS00755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS55_RS00755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS55_RS00765 PF00574 Clp protease APS55_RS00770 PF02650 WhiA C-terminal HTH domain APS55_RS00770 PF14527 WhiA LAGLIDADG-like domain APS55_RS00770 PF10298 WhiA N-terminal LAGLIDADG-like domain APS55_RS00775 PF01933 Uncharacterised protein family UPF0052 APS55_RS00780 PF17755 UvrA DNA-binding domain APS55_RS00780 PF17760 UvrA interaction domain APS55_RS00780 PF00005 ABC transporter APS55_RS00785 PF17757 UvrB interaction domain APS55_RS00785 PF12344 Ultra-violet resistance protein B APS55_RS00785 PF02151 UvrB/uvrC motif APS55_RS00785 PF04851 Type III restriction enzyme, res subunit APS55_RS00785 PF00271 Helicase conserved C-terminal domain APS55_RS00790 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS55_RS00795 PF00483 Nucleotidyl transferase APS55_RS00800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APS55_RS00800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APS55_RS00805 PF01790 Prolipoprotein diacylglyceryl transferase APS55_RS00810 PF07475 HPr Serine kinase C-terminal domain APS55_RS00810 PF02603 HPr Serine kinase N terminus APS55_RS00815 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV APS55_RS00820 PF04024 PspC domain APS55_RS00825 PF17820 PDZ domain APS55_RS00835 PF07517 SecA DEAD-like domain APS55_RS00835 PF01043 SecA preprotein cross-linking domain APS55_RS00835 PF07516 SecA Wing and Scaffold domain APS55_RS00845 PF04851 Type III restriction enzyme, res subunit APS55_RS00845 PF00271 Helicase conserved C-terminal domain APS55_RS00850 PF01205 Uncharacterized protein family UPF0029 APS55_RS00850 PF09186 Domain of unknown function (DUF1949) APS55_RS00855 PF00953 Glycosyl transferase family 4 APS55_RS00860 PF00118 TCP-1/cpn60 chaperonin family APS55_RS00865 PF00166 Chaperonin 10 Kd subunit APS55_RS00870 PF02629 CoA binding domain APS55_RS00870 PF06971 Putative DNA-binding protein N-terminus APS55_RS00875 PF00005 ABC transporter APS55_RS00875 PF16326 ABC transporter C-terminal domain APS55_RS00875 PF12848 ABC transporter APS55_RS00880 PF00814 Glycoprotease family APS55_RS00890 PF00814 Glycoprotease family APS55_RS00900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS55_RS00905 PF06156 Initiation control protein YabA APS55_RS00910 PF09115 DNA polymerase III, delta subunit, C terminal APS55_RS00915 PF06153 Cyclic-di-AMP receptor APS55_RS00920 PF02223 Thymidylate kinase APS55_RS00930 PF02132 RecR protein APS55_RS00930 PF13662 Toprim domain APS55_RS00935 PF02575 YbaB/EbfC DNA-binding family APS55_RS00940 PF12169 DNA polymerase III subunits gamma and tau domain III APS55_RS00950 PF14437 MafB19-like deaminase APS55_RS00955 PF05175 Methyltransferase small domain APS55_RS00960 PF00462 Glutaredoxin APS55_RS00965 PF08343 Ribonucleotide reductase N-terminal APS55_RS00965 PF00317 Ribonucleotide reductase, all-alpha domain APS55_RS00965 PF02867 Ribonucleotide reductase, barrel domain APS55_RS00970 PF00268 Ribonucleotide reductase, small chain APS55_RS00975 PF09924 Uncharacterised conserved protein (DUF2156) APS55_RS00975 PF03706 Lysylphosphatidylglycerol synthase TM region APS55_RS00980 PF16320 Ribosomal protein L7/L12 dimerisation domain APS55_RS00980 PF00542 Ribosomal protein L7/L12 C-terminal domain APS55_RS00985 PF00466 Ribosomal protein L10 APS55_RS00990 PF00687 Ribosomal protein L1p/L10e family APS55_RS00995 PF03946 Ribosomal protein L11, N-terminal domain APS55_RS00995 PF00298 Ribosomal protein L11, RNA binding domain APS55_RS01000 PF02357 Transcription termination factor nusG APS55_RS01000 PF00467 KOW motif APS55_RS01005 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APS55_RS01010 PF00471 Ribosomal protein L33 APS55_RS01020 PF05991 YacP-like NYN domain APS55_RS01025 PF00588 SpoU rRNA Methylase family APS55_RS01025 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS55_RS01030 PF00636 Ribonuclease III domain APS55_RS01035 PF09190 DALR domain APS55_RS01035 PF01406 tRNA synthetases class I (C) catalytic domain APS55_RS01040 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS55_RS01050 PF18073 Rubredoxin metal binding domain APS55_RS01055 PF00692 dUTPase APS55_RS01060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APS55_RS01065 PF03051 Peptidase C1-like family APS55_RS01070 PF00300 Histidine phosphatase superfamily (branch 1) APS55_RS01075 PF00892 EamA-like transporter family APS55_RS01080 PF03816 Cell envelope-related transcriptional attenuator domain APS55_RS01100 PF00288 GHMP kinases N terminal domain APS55_RS01100 PF08544 GHMP kinases C terminal APS55_RS01105 PF10263 SprT-like family APS55_RS01110 PF09371 Tex-like protein N-terminal domain APS55_RS01110 PF00575 S1 RNA binding domain APS55_RS01110 PF17674 HHH domain APS55_RS01110 PF16921 Tex protein YqgF-like domain APS55_RS01120 PF02540 NAD synthase APS55_RS01125 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain APS55_RS01125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain APS55_RS01125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APS55_RS01130 PF03808 Glycosyl transferase WecB/TagA/CpsF family APS55_RS01135 PF00392 Bacterial regulatory proteins, gntR family APS55_RS01135 PF07702 UTRA domain APS55_RS01140 PF03807 NADP oxidoreductase coenzyme F420-dependent APS55_RS01140 PF14748 Pyrroline-5-carboxylate reductase dimerisation APS55_RS01155 PF00854 POT family APS55_RS01195 PF01336 OB-fold nucleic acid binding domain APS55_RS01195 PF00152 tRNA synthetases class II (D, K and N) APS55_RS01200 PF01207 Dihydrouridine synthase (Dus) APS55_RS01205 PF01430 Hsp33 protein APS55_RS01210 PF01434 Peptidase family M41 APS55_RS01210 PF06480 FtsH Extracellular APS55_RS01210 PF00004 ATPase family associated with various cellular activities (AAA) APS55_RS01210 PF17862 AAA+ lid domain APS55_RS01215 PF00156 Phosphoribosyl transferase domain APS55_RS01215 PF01171 PP-loop family APS55_RS01215 PF11734 TilS substrate C-terminal domain APS55_RS01220 PF11734 TilS substrate C-terminal domain APS55_RS01220 PF01171 PP-loop family APS55_RS01225 PF00575 S1 RNA binding domain APS55_RS01235 PF01479 S4 domain APS55_RS01240 PF01943 Polysaccharide biosynthesis protein APS55_RS01240 PF14667 Polysaccharide biosynthesis C-terminal domain APS55_RS01245 PF00270 DEAD/DEAH box helicase APS55_RS01245 PF00271 Helicase conserved C-terminal domain APS55_RS01245 PF17757 UvrB interaction domain APS55_RS01245 PF03461 TRCF domain APS55_RS01245 PF02559 CarD-like/TRCF domain APS55_RS01250 PF01195 Peptidyl-tRNA hydrolase APS55_RS01255 PF00056 lactate/malate dehydrogenase, NAD binding domain APS55_RS01255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS55_RS01265 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system APS55_RS01275 PF00842 Alanine racemase, C-terminal domain APS55_RS01275 PF01168 Alanine racemase, N-terminal domain APS55_RS01280 PF00270 DEAD/DEAH box helicase APS55_RS01280 PF00271 Helicase conserved C-terminal domain APS55_RS01285 PF01225 Mur ligase family, catalytic domain APS55_RS01285 PF02875 Mur ligase family, glutamate ligase domain APS55_RS01285 PF08245 Mur ligase middle domain APS55_RS01295 PF01197 Ribosomal protein L31 APS55_RS01300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS55_RS01305 PF06418 CTP synthase N-terminus APS55_RS01305 PF00117 Glutamine amidotransferase class-I APS55_RS01310 PF05066 HB1, ASXL, restriction endonuclease HTH domain APS55_RS01320 PF01966 HD domain APS55_RS01335 PF14572 Phosphoribosyl synthetase-associated domain APS55_RS01335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS55_RS01340 PF00483 Nucleotidyl transferase APS55_RS01340 PF00132 Bacterial transferase hexapeptide (six repeats) APS55_RS01345 PF09182 Bacterial purine repressor, N-terminal APS55_RS01345 PF00156 Phosphoribosyl transferase domain APS55_RS01350 PF08544 GHMP kinases C terminal APS55_RS01350 PF00288 GHMP kinases N terminal domain APS55_RS01355 PF06257 Biofilm formation stimulator VEG APS55_RS01370 PF01026 TatD related DNase APS55_RS01375 PF01588 Putative tRNA binding domain APS55_RS01375 PF09334 tRNA synthetases class I (M) APS55_RS01375 PF08264 Anticodon-binding domain of tRNA APS55_RS01380 PF01904 Protein of unknown function DUF72 APS55_RS01385 PF02146 Sir2 family APS55_RS01395 PF00368 Hydroxymethylglutaryl-coenzyme A reductase APS55_RS01400 PF02541 Ppx/GppA phosphatase family APS55_RS01405 PF00579 tRNA synthetases class I (W and Y) APS55_RS01410 PF13538 UvrD-like helicase C-terminal domain APS55_RS01415 PF13090 Polyphosphate kinase C-terminal domain 2 APS55_RS01415 PF02503 Polyphosphate kinase middle domain APS55_RS01415 PF17941 Polyphosphate kinase C-terminal domain 1 APS55_RS01415 PF13089 Polyphosphate kinase N-terminal domain APS55_RS01445 PF01479 S4 domain APS55_RS01445 PF00579 tRNA synthetases class I (W and Y) APS55_RS01455 PF07690 Major Facilitator Superfamily APS55_RS01465 PF00535 Glycosyl transferase family 2 APS55_RS01480 PF00300 Histidine phosphatase superfamily (branch 1) APS55_RS01485 PF01594 AI-2E family transporter APS55_RS01515 PF00768 D-alanyl-D-alanine carboxypeptidase APS55_RS01515 PF07943 Penicillin-binding protein 5, C-terminal domain APS55_RS01520 PF16736 Single Cache-like APS55_RS01520 PF00989 PAS fold APS55_RS01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS55_RS01520 PF00512 His Kinase A (phospho-acceptor) domain APS55_RS01525 PF00486 Transcriptional regulatory protein, C terminal APS55_RS01525 PF00072 Response regulator receiver domain APS55_RS01530 PF00478 IMP dehydrogenase / GMP reductase domain APS55_RS01530 PF00571 CBS domain APS55_RS01540 PF06071 Protein of unknown function (DUF933) APS55_RS01540 PF01926 50S ribosome-binding GTPase APS55_RS01545 PF06107 Bacterial protein of unknown function (DUF951) APS55_RS01550 PF02195 ParB-like nuclease domain APS55_RS01550 PF17762 HTH domain found in ParB protein APS55_RS01555 PF13614 AAA domain APS55_RS01560 PF02527 rRNA small subunit methyltransferase G APS55_RS01565 PF00860 Permease family APS55_RS01570 PF07662 Na+ dependent nucleoside transporter C-terminus APS55_RS01570 PF01773 Na+ dependent nucleoside transporter N-terminus APS55_RS01575 PF01676 Metalloenzyme superfamily APS55_RS01605 PF13333 Integrase core domain APS55_RS01605 PF00665 Integrase core domain APS55_RS01605 PF13276 HTH-like domain APS55_RS01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS55_RS01630 PF03466 LysR substrate binding domain APS55_RS01650 PF13673 Acetyltransferase (GNAT) domain APS55_RS01665 PF01938 TRAM domain APS55_RS01665 PF05958 tRNA (Uracil-5-)-methyltransferase APS55_RS01680 PF00534 Glycosyl transferases group 1 APS55_RS01685 PF00534 Glycosyl transferases group 1 APS55_RS01685 PF13439 Glycosyltransferase Family 4 APS55_RS01715 PF13350 Tyrosine phosphatase family APS55_RS01730 PF13333 Integrase core domain APS55_RS01730 PF00665 Integrase core domain APS55_RS01745 PF10397 Adenylosuccinate lyase C-terminus APS55_RS01745 PF00206 Lyase APS55_RS01750 PF00709 Adenylosuccinate synthetase APS55_RS01755 PF00478 IMP dehydrogenase / GMP reductase domain APS55_RS01760 PF04203 Sortase domain APS55_RS01765 PF01180 Dihydroorotate dehydrogenase APS55_RS01770 PF02142 MGS-like domain APS55_RS01770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS55_RS01770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS55_RS01775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS55_RS01775 PF00117 Glutamine amidotransferase class-I APS55_RS01780 PF01979 Amidohydrolase family APS55_RS01785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS55_RS01785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS55_RS01790 PF06725 3D domain APS55_RS01790 PF01476 LysM domain APS55_RS01800 PF03553 Na+/H+ antiporter family APS55_RS01805 PF00085 Thioredoxin APS55_RS01810 PF03741 Integral membrane protein TerC family APS55_RS01815 PF13457 GW (Gly-Tryp) dipeptide domain APS55_RS01815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APS55_RS01825 PF01476 LysM domain APS55_RS01825 PF00877 NlpC/P60 family APS55_RS01825 PF08239 Bacterial SH3 domain APS55_RS01830 PF00300 Histidine phosphatase superfamily (branch 1) APS55_RS01840 PF00884 Sulfatase APS55_RS01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS55_RS01860 PF01156 Inosine-uridine preferring nucleoside hydrolase APS55_RS01870 PF03960 ArsC family APS55_RS01875 PF02872 5'-nucleotidase, C-terminal domain APS55_RS01875 PF00149 Calcineurin-like phosphoesterase APS55_RS01880 PF01966 HD domain APS55_RS01880 PF00013 KH domain APS55_RS01880 PF12072 Domain of unknown function (DUF3552) APS55_RS01895 PF00909 Ammonium Transporter Family APS55_RS01915 PF01479 S4 domain APS55_RS01915 PF00849 RNA pseudouridylate synthase APS55_RS01920 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase APS55_RS01920 PF09364 XFP N-terminal domain APS55_RS01920 PF09363 XFP C-terminal domain APS55_RS01925 PF00392 Bacterial regulatory proteins, gntR family APS55_RS01925 PF07702 UTRA domain APS55_RS01940 PF04073 Aminoacyl-tRNA editing domain APS55_RS01945 PF01966 HD domain APS55_RS01960 PF00248 Aldo/keto reductase family APS55_RS01970 PF00464 Serine hydroxymethyltransferase APS55_RS01985 PF02632 BioY family APS55_RS01995 PF02627 Carboxymuconolactone decarboxylase family APS55_RS02005 PF13411 MerR HTH family regulatory protein APS55_RS02015 PF02237 Biotin protein ligase C terminal domain APS55_RS02015 PF08279 HTH domain APS55_RS02015 PF03099 Biotin/lipoate A/B protein ligase family APS55_RS02025 PF13411 MerR HTH family regulatory protein APS55_RS02030 PF00248 Aldo/keto reductase family APS55_RS02040 PF00005 ABC transporter APS55_RS02070 PF13520 Amino acid permease APS55_RS02075 PF08240 Alcohol dehydrogenase GroES-like domain APS55_RS02075 PF13823 Alcohol dehydrogenase GroES-associated APS55_RS02075 PF00107 Zinc-binding dehydrogenase APS55_RS02080 PF13333 Integrase core domain APS55_RS02080 PF00665 Integrase core domain APS55_RS02080 PF13276 HTH-like domain APS55_RS02120 PF03551 Transcriptional regulator PadR-like family APS55_RS02125 PF00251 Glycosyl hydrolases family 32 N-terminal domain APS55_RS02125 PF08244 Glycosyl hydrolases family 32 C terminal APS55_RS02130 PF00480 ROK family APS55_RS02135 PF00342 Phosphoglucose isomerase APS55_RS02140 PF00480 ROK family APS55_RS02160 PF13411 MerR HTH family regulatory protein APS55_RS02170 PF13302 Acetyltransferase (GNAT) domain APS55_RS02200 PF00665 Integrase core domain APS55_RS02200 PF13333 Integrase core domain APS55_RS02265 PF00011 Hsp20/alpha crystallin family APS55_RS02270 PF00011 Hsp20/alpha crystallin family APS55_RS02280 PF00512 His Kinase A (phospho-acceptor) domain APS55_RS02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS55_RS02285 PF00486 Transcriptional regulatory protein, C terminal APS55_RS02285 PF00072 Response regulator receiver domain APS55_RS02295 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase APS55_RS02300 PF00535 Glycosyl transferase family 2 APS55_RS02320 PF00571 CBS domain APS55_RS02320 PF03471 Transporter associated domain APS55_RS02320 PF01595 Cyclin M transmembrane N-terminal domain APS55_RS02325 PF07972 NrdI Flavodoxin like APS55_RS02330 PF07690 Major Facilitator Superfamily APS55_RS02335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APS55_RS02335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APS55_RS02340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS55_RS02340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APS55_RS02345 PF07732 Multicopper oxidase APS55_RS02345 PF07731 Multicopper oxidase APS55_RS02350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS55_RS02350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS55_RS02355 PF00202 Aminotransferase class-III APS55_RS02360 PF00696 Amino acid kinase family APS55_RS02375 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS55_RS02375 PF00117 Glutamine amidotransferase class-I APS55_RS02380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS55_RS02380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS55_RS02380 PF02142 MGS-like domain APS55_RS02385 PF00375 Sodium:dicarboxylate symporter family APS55_RS02405 PF02803 Thiolase, C-terminal domain APS55_RS02405 PF00108 Thiolase, N-terminal domain APS55_RS02420 PF03734 L,D-transpeptidase catalytic domain APS55_RS02435 PF03070 TENA/THI-4/PQQC family APS55_RS02440 PF08543 Phosphomethylpyrimidine kinase APS55_RS02445 PF02581 Thiamine monophosphate synthase APS55_RS02450 PF02110 Hydroxyethylthiazole kinase family APS55_RS02460 PF13419 Haloacid dehalogenase-like hydrolase APS55_RS02465 PF03636 Glycosyl hydrolase family 65, N-terminal domain APS55_RS02465 PF03633 Glycosyl hydrolase family 65, C-terminal domain APS55_RS02465 PF03632 Glycosyl hydrolase family 65 central catalytic domain APS55_RS02480 PF00106 short chain dehydrogenase APS55_RS02485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS02485 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS55_RS02490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS02490 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS55_RS02500 PF00582 Universal stress protein family APS55_RS02505 PF01566 Natural resistance-associated macrophage protein APS55_RS02510 PF01979 Amidohydrolase family APS55_RS02510 PF13382 Adenine deaminase C-terminal domain APS55_RS02535 PF13180 PDZ domain APS55_RS02540 PF00753 Metallo-beta-lactamase superfamily APS55_RS02555 PF00672 HAMP domain APS55_RS02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS55_RS02555 PF13426 PAS domain APS55_RS02555 PF00512 His Kinase A (phospho-acceptor) domain APS55_RS02555 PF14827 Double sensory domain of two-component sensor kinase APS55_RS02560 PF00486 Transcriptional regulatory protein, C terminal APS55_RS02560 PF00072 Response regulator receiver domain APS55_RS02575 PF01555 DNA methylase APS55_RS02585 PF00999 Sodium/hydrogen exchanger family APS55_RS02605 PF00999 Sodium/hydrogen exchanger family APS55_RS02615 PF13597 Anaerobic ribonucleoside-triphosphate reductase APS55_RS02615 PF03477 ATP cone domain APS55_RS02625 PF00005 ABC transporter APS55_RS02630 PF01458 Uncharacterized protein family (UPF0051) APS55_RS02635 PF00266 Aminotransferase class-V APS55_RS02645 PF01458 Uncharacterized protein family (UPF0051) APS55_RS02650 PF10415 Fumarase C C-terminus APS55_RS02650 PF00206 Lyase APS55_RS02660 PF13673 Acetyltransferase (GNAT) domain APS55_RS02665 PF01047 MarR family APS55_RS02670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS55_RS02670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS55_RS02675 PF00155 Aminotransferase class I and II APS55_RS02680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS55_RS02685 PF01979 Amidohydrolase family APS55_RS02695 PF03796 DnaB-like helicase C terminal domain APS55_RS02695 PF00772 DnaB-like helicase N terminal domain APS55_RS02700 PF03948 Ribosomal protein L9, C-terminal domain APS55_RS02700 PF01281 Ribosomal protein L9, N-terminal domain APS55_RS02705 PF01368 DHH family APS55_RS02705 PF02272 DHHA1 domain APS55_RS02710 PF01084 Ribosomal protein S18 APS55_RS02715 PF00436 Single-strand binding protein family APS55_RS02720 PF01250 Ribosomal protein S6 APS55_RS02735 PF03989 DNA gyrase C-terminal domain, beta-propeller APS55_RS02735 PF00521 DNA gyrase/topoisomerase IV, subunit A APS55_RS02740 PF00986 DNA gyrase B subunit, carboxyl terminus APS55_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS55_RS02740 PF00204 DNA gyrase B APS55_RS02740 PF01751 Toprim domain APS55_RS02745 PF02463 RecF/RecN/SMC N terminal domain APS55_RS02755 PF01321 Creatinase/Prolidase N-terminal domain APS55_RS02755 PF00557 Metallopeptidase family M24 APS55_RS02760 PF02767 DNA polymerase III beta subunit, central domain APS55_RS02760 PF00712 DNA polymerase III beta subunit, N-terminal domain APS55_RS02760 PF02768 DNA polymerase III beta subunit, C-terminal domain APS55_RS02765 PF00308 Bacterial dnaA protein APS55_RS02765 PF08299 Bacterial dnaA protein helix-turn-helix APS55_RS02765 PF11638 DnaA N-terminal domain APS55_RS02770 PF00468 Ribosomal protein L34 APS55_RS02775 PF00825 Ribonuclease P APS55_RS02780 PF02096 60Kd inner membrane protein APS55_RS02785 PF14804 Jag N-terminus APS55_RS02785 PF01424 R3H domain APS55_RS02790 PF12631 MnmE helical domain APS55_RS02790 PF01926 50S ribosome-binding GTPase APS55_RS02790 PF10396 GTP-binding protein TrmE N-terminus APS55_RS02795 PF01134 Glucose inhibited division protein A APS55_RS02795 PF13932 GidA associated domain APS55_RS02805 PF10502 Signal peptidase, peptidase S26 APS55_RS02810 PF10502 Signal peptidase, peptidase S26 APS55_RS02820 PF00202 Aminotransferase class-III APS55_RS02825 PF03051 Peptidase C1-like family APS55_RS02830 PF03051 Peptidase C1-like family APS55_RS02835 PF00764 Arginosuccinate synthase APS55_RS02840 PF14698 Argininosuccinate lyase C-terminal APS55_RS02840 PF00206 Lyase APS55_RS02845 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS02850 PF00005 ABC transporter APS55_RS02870 PF01717 Cobalamin-independent synthase, Catalytic domain APS55_RS02870 PF08267 Cobalamin-independent synthase, N-terminal domain APS55_RS02875 PF04204 Homoserine O-succinyltransferase APS55_RS02880 PF01053 Cys/Met metabolism PLP-dependent enzyme APS55_RS02885 PF01053 Cys/Met metabolism PLP-dependent enzyme APS55_RS02890 PF01842 ACT domain APS55_RS02890 PF00742 Homoserine dehydrogenase APS55_RS02890 PF03447 Homoserine dehydrogenase, NAD binding domain APS55_RS02900 PF00665 Integrase core domain APS55_RS02900 PF13333 Integrase core domain APS55_RS02915 PF13091 PLD-like domain APS55_RS02915 PF13396 Phospholipase_D-nuclease N-terminal APS55_RS02920 PF00156 Phosphoribosyl transferase domain APS55_RS02925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS55_RS02930 PF07690 Major Facilitator Superfamily APS55_RS02940 PF13333 Integrase core domain APS55_RS02940 PF13276 HTH-like domain APS55_RS02940 PF00665 Integrase core domain APS55_RS02960 PF01520 N-acetylmuramoyl-L-alanine amidase APS55_RS02960 PF08239 Bacterial SH3 domain APS55_RS02965 PF00005 ABC transporter APS55_RS02970 PF00950 ABC 3 transport family APS55_RS02985 PF08359 YsiA-like protein, C-terminal region APS55_RS02985 PF00440 Bacterial regulatory proteins, tetR family APS55_RS02990 PF06421 GTP-binding protein LepA C-terminus APS55_RS02990 PF00009 Elongation factor Tu GTP binding domain APS55_RS02990 PF00679 Elongation factor G C-terminus APS55_RS02995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS55_RS03000 PF08240 Alcohol dehydrogenase GroES-like domain APS55_RS03000 PF00107 Zinc-binding dehydrogenase APS55_RS03005 PF00480 ROK family APS55_RS03010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS55_RS03015 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS55_RS03020 PF00075 RNase H APS55_RS03030 PF00860 Permease family APS55_RS03035 PF00248 Aldo/keto reductase family APS55_RS03050 PF00324 Amino acid permease APS55_RS03055 PF00324 Amino acid permease APS55_RS03075 PF05067 Manganese containing catalase APS55_RS03080 PF12705 PD-(D/E)XK nuclease superfamily APS55_RS03085 PF13361 UvrD-like helicase C-terminal domain APS55_RS03085 PF00580 UvrD/REP helicase N-terminal domain APS55_RS03085 PF12705 PD-(D/E)XK nuclease superfamily APS55_RS03095 PF00005 ABC transporter APS55_RS03095 PF13732 Domain of unknown function (DUF4162) APS55_RS03100 PF00171 Aldehyde dehydrogenase family APS55_RS03100 PF00465 Iron-containing alcohol dehydrogenase APS55_RS03110 PF03601 Conserved hypothetical protein 698 APS55_RS03120 PF07690 Major Facilitator Superfamily APS55_RS03130 PF00005 ABC transporter APS55_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS03140 PF10431 C-terminal, D2-small domain, of ClpB protein APS55_RS03140 PF17871 AAA lid domain APS55_RS03140 PF07724 AAA domain (Cdc48 subfamily) APS55_RS03140 PF00004 ATPase family associated with various cellular activities (AAA) APS55_RS03160 PF03949 Malic enzyme, NAD binding domain APS55_RS03160 PF00390 Malic enzyme, N-terminal domain APS55_RS03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS55_RS03165 PF03466 LysR substrate binding domain APS55_RS03180 PF00665 Integrase core domain APS55_RS03180 PF13333 Integrase core domain APS55_RS03190 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS55_RS03195 PF00005 ABC transporter APS55_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS03205 PF00924 Mechanosensitive ion channel APS55_RS03210 PF00924 Mechanosensitive ion channel APS55_RS03225 PF00005 ABC transporter APS55_RS03225 PF02687 FtsX-like permease family APS55_RS03225 PF12704 MacB-like periplasmic core domain APS55_RS03255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS03255 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS55_RS03270 PF00005 ABC transporter APS55_RS03295 PF03009 Glycerophosphoryl diester phosphodiesterase family APS55_RS03310 PF00665 Integrase core domain APS55_RS03310 PF13333 Integrase core domain APS55_RS03335 PF08544 GHMP kinases C terminal APS55_RS03335 PF00288 GHMP kinases N terminal domain APS55_RS03340 PF14821 Threonine synthase N terminus APS55_RS03340 PF00291 Pyridoxal-phosphate dependent enzyme APS55_RS03345 PF00742 Homoserine dehydrogenase APS55_RS03345 PF03447 Homoserine dehydrogenase, NAD binding domain APS55_RS03345 PF01842 ACT domain APS55_RS03365 PF06628 Catalase-related immune-responsive APS55_RS03365 PF00199 Catalase APS55_RS03375 PF02590 Predicted SPOUT methyltransferase APS55_RS03380 PF01381 Helix-turn-helix APS55_RS03400 PF02324 Glycosyl hydrolase family 70 APS55_RS03400 PF01473 Putative cell wall binding repeat APS55_RS03410 PF11838 ERAP1-like C-terminal domain APS55_RS03410 PF01433 Peptidase family M1 domain APS55_RS03415 PF07943 Penicillin-binding protein 5, C-terminal domain APS55_RS03415 PF00768 D-alanyl-D-alanine carboxypeptidase APS55_RS03420 PF00731 AIR carboxylase APS55_RS03425 PF02222 ATP-grasp domain APS55_RS03425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APS55_RS03430 PF01259 SAICAR synthetase APS55_RS03445 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APS55_RS03445 PF00586 AIR synthase related protein, N-terminal domain APS55_RS03445 PF02769 AIR synthase related protein, C-terminal domain APS55_RS03450 PF13537 Glutamine amidotransferase domain APS55_RS03450 PF00156 Phosphoribosyl transferase domain APS55_RS03455 PF00586 AIR synthase related protein, N-terminal domain APS55_RS03455 PF02769 AIR synthase related protein, C-terminal domain APS55_RS03460 PF00551 Formyl transferase APS55_RS03465 PF02142 MGS-like domain APS55_RS03465 PF01808 AICARFT/IMPCHase bienzyme APS55_RS03470 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APS55_RS03470 PF02843 Phosphoribosylglycinamide synthetase, C domain APS55_RS03470 PF02844 Phosphoribosylglycinamide synthetase, N domain APS55_RS03480 PF07690 Major Facilitator Superfamily APS55_RS03490 PF02082 Transcriptional regulator APS55_RS03495 PF05368 NmrA-like family APS55_RS03515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS55_RS03515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS55_RS03515 PF00205 Thiamine pyrophosphate enzyme, central domain APS55_RS03535 PF00665 Integrase core domain APS55_RS03535 PF13333 Integrase core domain APS55_RS03555 PF07690 Major Facilitator Superfamily APS55_RS03565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APS55_RS03580 PF01965 DJ-1/PfpI family APS55_RS03590 PF00665 Integrase core domain APS55_RS03590 PF13333 Integrase core domain APS55_RS03600 PF00230 Major intrinsic protein APS55_RS03605 PF03306 Alpha-acetolactate decarboxylase APS55_RS03615 PF07563 Protein of unknown function (DUF1541) APS55_RS03635 PF07722 Peptidase C26 APS55_RS03640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS55_RS03645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS55_RS03655 PF00005 ABC transporter APS55_RS03665 PF04397 LytTr DNA-binding domain APS55_RS03665 PF00072 Response regulator receiver domain APS55_RS03690 PF00206 Lyase APS55_RS03690 PF10415 Fumarase C C-terminus APS55_RS03715 PF04011 LemA family APS55_RS03725 PF05525 Branched-chain amino acid transport protein APS55_RS03735 PF05525 Branched-chain amino acid transport protein APS55_RS03745 PF00817 impB/mucB/samB family APS55_RS03745 PF11799 impB/mucB/samB family C-terminal domain APS55_RS03745 PF11798 IMS family HHH motif APS55_RS03765 PF01566 Natural resistance-associated macrophage protein APS55_RS03770 PF03816 Cell envelope-related transcriptional attenuator domain APS55_RS03775 PF02706 Chain length determinant protein APS55_RS03780 PF13614 AAA domain APS55_RS03790 PF02397 Bacterial sugar transferase APS55_RS03795 PF13439 Glycosyltransferase Family 4 APS55_RS03795 PF00534 Glycosyl transferases group 1 APS55_RS03800 PF00535 Glycosyl transferase family 2 APS55_RS03820 PF00083 Sugar (and other) transporter APS55_RS03820 PF07690 Major Facilitator Superfamily APS55_RS03835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS55_RS03845 PF02324 Glycosyl hydrolase family 70 APS55_RS03845 PF01473 Putative cell wall binding repeat APS55_RS03850 PF01473 Putative cell wall binding repeat APS55_RS03850 PF02324 Glycosyl hydrolase family 70 APS55_RS03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS55_RS03860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS55_RS03870 PF13333 Integrase core domain APS55_RS03870 PF00665 Integrase core domain APS55_RS03880 PF13520 Amino acid permease APS55_RS03885 PF00324 Amino acid permease APS55_RS03890 PF00324 Amino acid permease APS55_RS03895 PF01047 MarR family APS55_RS03910 PF00005 ABC transporter APS55_RS03920 PF03006 Haemolysin-III related APS55_RS03925 PF00893 Small Multidrug Resistance protein APS55_RS03940 PF08239 Bacterial SH3 domain APS55_RS03940 PF00877 NlpC/P60 family APS55_RS03940 PF01476 LysM domain APS55_RS03965 PF13460 NAD(P)H-binding APS55_RS03970 PF12848 ABC transporter APS55_RS03970 PF00005 ABC transporter APS55_RS03995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS55_RS03995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS55_RS03995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS55_RS03995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS55_RS04000 PF00881 Nitroreductase family APS55_RS04005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS55_RS04005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS55_RS04010 PF00550 Phosphopantetheine attachment site APS55_RS04015 PF00698 Acyl transferase domain APS55_RS04025 PF00364 Biotin-requiring enzyme APS55_RS04030 PF07977 FabA-like domain APS55_RS04035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS55_RS04035 PF00289 Biotin carboxylase, N-terminal domain APS55_RS04035 PF02785 Biotin carboxylase C-terminal domain APS55_RS04040 PF01039 Carboxyl transferase domain APS55_RS04045 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APS55_RS04060 PF07977 FabA-like domain APS55_RS04065 PF02801 Beta-ketoacyl synthase, C-terminal domain APS55_RS04065 PF00109 Beta-ketoacyl synthase, N-terminal domain APS55_RS04070 PF16363 GDP-mannose 4,6 dehydratase APS55_RS04075 PF00248 Aldo/keto reductase family APS55_RS04080 PF00892 EamA-like transporter family APS55_RS04090 PF03176 MMPL family APS55_RS04100 PF13520 Amino acid permease APS55_RS04105 PF00892 EamA-like transporter family APS55_RS04150 PF00313 'Cold-shock' DNA-binding domain APS55_RS04155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS55_RS04155 PF00005 ABC transporter APS55_RS04160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS55_RS04160 PF00005 ABC transporter APS55_RS04165 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS04170 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS04175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS55_RS04180 PF02525 Flavodoxin-like fold APS55_RS04195 PF13333 Integrase core domain APS55_RS04195 PF13276 HTH-like domain APS55_RS04195 PF00665 Integrase core domain APS55_RS04200 PF08543 Phosphomethylpyrimidine kinase APS55_RS04210 PF12464 Maltose acetyltransferase APS55_RS04210 PF14602 Hexapeptide repeat of succinyl-transferase APS55_RS04215 PF02028 BCCT, betaine/carnitine/choline family transporter APS55_RS04220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS55_RS04220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS55_RS04225 PF00557 Metallopeptidase family M24 APS55_RS04235 PF07690 Major Facilitator Superfamily APS55_RS04240 PF01431 Peptidase family M13 APS55_RS04240 PF05649 Peptidase family M13 APS55_RS04245 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APS55_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS04255 PF00571 CBS domain APS55_RS04255 PF00005 ABC transporter APS55_RS04270 PF07676 WD40-like Beta Propeller Repeat APS55_RS04270 PF00326 Prolyl oligopeptidase family APS55_RS04280 PF03180 NLPA lipoprotein APS55_RS04285 PF09383 NIL domain APS55_RS04285 PF00005 ABC transporter APS55_RS04290 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS04295 PF07687 Peptidase dimerisation domain APS55_RS04295 PF01546 Peptidase family M20/M25/M40 APS55_RS04310 PF00155 Aminotransferase class I and II APS55_RS04315 PF14010 Phosphoenolpyruvate carboxylase APS55_RS04320 PF07690 Major Facilitator Superfamily APS55_RS04330 PF01678 Diaminopimelate epimerase APS55_RS04335 PF00696 Amino acid kinase family APS55_RS04335 PF13840 ACT domain APS55_RS04340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS55_RS04340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS55_RS04345 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal APS55_RS04345 PF14602 Hexapeptide repeat of succinyl-transferase APS55_RS04345 PF00132 Bacterial transferase hexapeptide (six repeats) APS55_RS04350 PF01546 Peptidase family M20/M25/M40 APS55_RS04350 PF07687 Peptidase dimerisation domain APS55_RS04355 PF00701 Dihydrodipicolinate synthetase family APS55_RS04360 PF05173 Dihydrodipicolinate reductase, C-terminus APS55_RS04360 PF01113 Dihydrodipicolinate reductase, N-terminus APS55_RS04365 PF00155 Aminotransferase class I and II APS55_RS04370 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS55_RS04370 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS55_RS04375 PF01475 Ferric uptake regulator family APS55_RS04385 PF02574 Homocysteine S-methyltransferase APS55_RS04390 PF00324 Amino acid permease APS55_RS04395 PF10282 Lactonase, 7-bladed beta-propeller APS55_RS04410 PF02645 Uncharacterised protein, DegV family COG1307 APS55_RS04415 PF00230 Major intrinsic protein APS55_RS04425 PF07690 Major Facilitator Superfamily APS55_RS04435 PF00860 Permease family APS55_RS04440 PF00710 Asparaginase, N-terminal APS55_RS04440 PF17763 Glutaminase/Asparaginase C-terminal domain APS55_RS04450 PF00005 ABC transporter APS55_RS04465 PF13333 Integrase core domain APS55_RS04465 PF00665 Integrase core domain APS55_RS04485 PF00005 ABC transporter APS55_RS04490 PF09819 ABC-type cobalt transport system, permease component APS55_RS04495 PF07943 Penicillin-binding protein 5, C-terminal domain APS55_RS04495 PF00768 D-alanyl-D-alanine carboxypeptidase APS55_RS04505 PF13520 Amino acid permease APS55_RS04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS55_RS04510 PF03466 LysR substrate binding domain APS55_RS04520 PF13333 Integrase core domain APS55_RS04520 PF00665 Integrase core domain APS55_RS04520 PF13276 HTH-like domain APS55_RS04545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APS55_RS04545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS55_RS04550 PF00005 ABC transporter APS55_RS04550 PF09383 NIL domain APS55_RS04555 PF02653 Branched-chain amino acid transport system / permease component APS55_RS04565 PF13520 Amino acid permease APS55_RS04570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APS55_RS04575 PF12848 ABC transporter APS55_RS04575 PF00005 ABC transporter APS55_RS04585 PF00561 alpha/beta hydrolase fold APS55_RS04590 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain APS55_RS04590 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal APS55_RS04590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APS55_RS04595 PF13344 Haloacid dehalogenase-like hydrolase APS55_RS04595 PF00293 NUDIX domain APS55_RS04600 PF00625 Guanylate kinase APS55_RS04615 PF01926 50S ribosome-binding GTPase APS55_RS04615 PF16360 GTP-binding GTPase Middle Region APS55_RS04615 PF13167 GTP-binding GTPase N-terminal APS55_RS04620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS55_RS04625 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS04630 PF12911 N-terminal TM domain of oligopeptide transport permease C APS55_RS04635 PF00005 ABC transporter APS55_RS04635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS55_RS04640 PF00005 ABC transporter APS55_RS04640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS55_RS04645 PF00300 Histidine phosphatase superfamily (branch 1) APS55_RS04650 PF13538 UvrD-like helicase C-terminal domain APS55_RS04655 PF00485 Phosphoribulokinase / Uridine kinase family APS55_RS04660 PF00958 GMP synthase C terminal domain APS55_RS04660 PF02540 NAD synthase APS55_RS04660 PF00117 Glutamine amidotransferase class-I APS55_RS04665 PF00171 Aldehyde dehydrogenase family APS55_RS04670 PF00696 Amino acid kinase family APS55_RS04675 PF00892 EamA-like transporter family APS55_RS04680 PF08240 Alcohol dehydrogenase GroES-like domain APS55_RS04680 PF00107 Zinc-binding dehydrogenase APS55_RS04685 PF00005 ABC transporter APS55_RS04690 PF14537 Cytochrome c3 APS55_RS04690 PF00890 FAD binding domain APS55_RS04700 PF00194 Eukaryotic-type carbonic anhydrase APS55_RS04705 PF00849 RNA pseudouridylate synthase APS55_RS04725 PF01545 Cation efflux family APS55_RS04755 PF01925 Sulfite exporter TauE/SafE APS55_RS04775 PF00324 Amino acid permease APS55_RS04780 PF01712 Deoxynucleoside kinase APS55_RS04785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS55_RS04785 PF02403 Seryl-tRNA synthetase N-terminal domain APS55_RS04830 PF05848 CtsR N-terminal HTH domain APS55_RS04830 PF17727 CtsR C-terminal dimerization domain APS55_RS04835 PF10431 C-terminal, D2-small domain, of ClpB protein APS55_RS04835 PF07724 AAA domain (Cdc48 subfamily) APS55_RS04835 PF00004 ATPase family associated with various cellular activities (AAA) APS55_RS04835 PF02861 Clp amino terminal domain, pathogenicity island component APS55_RS04835 PF17871 AAA lid domain APS55_RS04840 PF04565 RNA polymerase Rpb2, domain 3 APS55_RS04840 PF10385 RNA polymerase beta subunit external 1 domain APS55_RS04840 PF04561 RNA polymerase Rpb2, domain 2 APS55_RS04840 PF04563 RNA polymerase beta subunit APS55_RS04840 PF00562 RNA polymerase Rpb2, domain 6 APS55_RS04840 PF04560 RNA polymerase Rpb2, domain 7 APS55_RS04845 PF04983 RNA polymerase Rpb1, domain 3 APS55_RS04845 PF00623 RNA polymerase Rpb1, domain 2 APS55_RS04845 PF04997 RNA polymerase Rpb1, domain 1 APS55_RS04845 PF05000 RNA polymerase Rpb1, domain 4 APS55_RS04845 PF04998 RNA polymerase Rpb1, domain 5 APS55_RS04855 PF00164 Ribosomal protein S12/S23 APS55_RS04860 PF00177 Ribosomal protein S7p/S5e APS55_RS04865 PF03764 Elongation factor G, domain IV APS55_RS04865 PF03144 Elongation factor Tu domain 2 APS55_RS04865 PF14492 Elongation Factor G, domain II APS55_RS04865 PF00679 Elongation factor G C-terminus APS55_RS04865 PF00009 Elongation factor Tu GTP binding domain APS55_RS04870 PF00338 Ribosomal protein S10p/S20e APS55_RS04875 PF00297 Ribosomal protein L3 APS55_RS04880 PF00573 Ribosomal protein L4/L1 family APS55_RS04885 PF00276 Ribosomal protein L23 APS55_RS04890 PF00181 Ribosomal Proteins L2, RNA binding domain APS55_RS04890 PF03947 Ribosomal Proteins L2, C-terminal domain APS55_RS04895 PF00203 Ribosomal protein S19 APS55_RS04900 PF00237 Ribosomal protein L22p/L17e APS55_RS04905 PF07650 KH domain APS55_RS04905 PF00189 Ribosomal protein S3, C-terminal domain APS55_RS04910 PF00252 Ribosomal protein L16p/L10e APS55_RS04915 PF00831 Ribosomal L29 protein APS55_RS04920 PF00366 Ribosomal protein S17 APS55_RS04925 PF00238 Ribosomal protein L14p/L23e APS55_RS04930 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APS55_RS04930 PF00467 KOW motif APS55_RS04935 PF00673 ribosomal L5P family C-terminus APS55_RS04935 PF00281 Ribosomal protein L5 APS55_RS04940 PF00253 Ribosomal protein S14p/S29e APS55_RS04945 PF00410 Ribosomal protein S8 APS55_RS04950 PF00347 Ribosomal protein L6 APS55_RS04955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APS55_RS04960 PF00333 Ribosomal protein S5, N-terminal domain APS55_RS04960 PF03719 Ribosomal protein S5, C-terminal domain APS55_RS04965 PF00327 Ribosomal protein L30p/L7e APS55_RS04970 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APS55_RS04975 PF00344 SecY translocase APS55_RS04980 PF05191 Adenylate kinase, active site lid APS55_RS04985 PF01176 Translation initiation factor 1A / IF-1 APS55_RS04990 PF00444 Ribosomal protein L36 APS55_RS04995 PF00416 Ribosomal protein S13/S18 APS55_RS05000 PF00411 Ribosomal protein S11 APS55_RS05005 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APS55_RS05005 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APS55_RS05005 PF01000 RNA polymerase Rpb3/RpoA insert domain APS55_RS05010 PF01196 Ribosomal protein L17 APS55_RS05015 PF00005 ABC transporter APS55_RS05020 PF00005 ABC transporter APS55_RS05025 PF02361 Cobalt transport protein APS55_RS05030 PF01416 tRNA pseudouridine synthase APS55_RS05035 PF00572 Ribosomal protein L13 APS55_RS05040 PF00380 Ribosomal protein S9/S16 APS55_RS05045 PF12822 ECF transporter, substrate-specific component APS55_RS05055 PF13457 GW (Gly-Tryp) dipeptide domain APS55_RS05055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APS55_RS05065 PF00580 UvrD/REP helicase N-terminal domain APS55_RS05065 PF13361 UvrD-like helicase C-terminal domain APS55_RS05070 PF12826 Helix-hairpin-helix motif APS55_RS05070 PF01653 NAD-dependent DNA ligase adenylation domain APS55_RS05070 PF03120 NAD-dependent DNA ligase OB-fold domain APS55_RS05070 PF00533 BRCA1 C Terminus (BRCT) domain APS55_RS05070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APS55_RS05075 PF07537 CamS sex pheromone cAM373 precursor APS55_RS05080 PF02686 Glu-tRNAGln amidotransferase C subunit APS55_RS05085 PF01425 Amidase APS55_RS05090 PF02934 GatB/GatE catalytic domain APS55_RS05090 PF02637 GatB domain APS55_RS05095 PF00781 Diacylglycerol kinase catalytic domain APS55_RS05100 PF05958 tRNA (Uracil-5-)-methyltransferase APS55_RS05100 PF01938 TRAM domain APS55_RS05105 PF01555 DNA methylase APS55_RS05105 PF18273 Type III R-M EcoP15I C-terminal domain APS55_RS05110 PF08774 VRR-NUC domain APS55_RS05110 PF04851 Type III restriction enzyme, res subunit APS55_RS05135 PF13520 Amino acid permease APS55_RS05140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS55_RS05140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS55_RS05145 PF01183 Glycosyl hydrolases family 25 APS55_RS05145 PF01471 Putative peptidoglycan binding domain APS55_RS05150 PF00271 Helicase conserved C-terminal domain APS55_RS05150 PF00270 DEAD/DEAH box helicase APS55_RS05160 PF12849 PBP superfamily domain APS55_RS05165 PF12849 PBP superfamily domain APS55_RS05170 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS05180 PF00005 ABC transporter APS55_RS05185 PF00005 ABC transporter APS55_RS05190 PF01895 PhoU domain APS55_RS05195 PF00486 Transcriptional regulatory protein, C terminal APS55_RS05195 PF00072 Response regulator receiver domain APS55_RS05200 PF06800 Sugar transport protein APS55_RS05205 PF02447 GntP family permease APS55_RS05210 PF04138 GtrA-like protein APS55_RS05215 PF00535 Glycosyl transferase family 2 APS55_RS05220 PF02350 UDP-N-acetylglucosamine 2-epimerase APS55_RS05225 PF03631 Virulence factor BrkB APS55_RS05230 PF00258 Flavodoxin APS55_RS05235 PF02631 RecX family APS55_RS05240 PF01594 AI-2E family transporter APS55_RS05245 PF01467 Cytidylyltransferase-like APS55_RS05250 PF00009 Elongation factor Tu GTP binding domain APS55_RS05250 PF03144 Elongation factor Tu domain 2 APS55_RS05250 PF16658 Class II release factor RF3, C-terminal domain APS55_RS05260 PF17871 AAA lid domain APS55_RS05260 PF07724 AAA domain (Cdc48 subfamily) APS55_RS05260 PF00004 ATPase family associated with various cellular activities (AAA) APS55_RS05260 PF10431 C-terminal, D2-small domain, of ClpB protein APS55_RS05265 PF00381 PTS HPr component phosphorylation site APS55_RS05270 PF13439 Glycosyltransferase Family 4 APS55_RS05270 PF00534 Glycosyl transferases group 1 APS55_RS05275 PF00534 Glycosyl transferases group 1 APS55_RS05275 PF13439 Glycosyltransferase Family 4 APS55_RS05285 PF00884 Sulfatase APS55_RS05420 PF03965 Penicillinase repressor APS55_RS05435 PF12706 Beta-lactamase superfamily domain APS55_RS05440 PF05389 Negative regulator of genetic competence (MecA) APS55_RS05450 PF08439 Oligopeptidase F APS55_RS05450 PF01432 Peptidase family M3 APS55_RS05460 PF04607 Region found in RelA / SpoT proteins APS55_RS05465 PF01513 ATP-NAD kinase APS55_RS05470 PF00849 RNA pseudouridylate synthase APS55_RS05475 PF08241 Methyltransferase domain APS55_RS05480 PF00588 SpoU rRNA Methylase family APS55_RS05485 PF17854 FtsK alpha domain APS55_RS05485 PF09397 Ftsk gamma domain APS55_RS05485 PF01580 FtsK/SpoIIIE family APS55_RS05490 PF02381 MraZ protein, putative antitoxin-like APS55_RS05495 PF01795 MraW methylase family APS55_RS05505 PF03793 PASTA domain APS55_RS05505 PF00905 Penicillin binding protein transpeptidase domain APS55_RS05505 PF03717 Penicillin-binding Protein dimerisation domain APS55_RS05510 PF00953 Glycosyl transferase family 4 APS55_RS05510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APS55_RS05515 PF02875 Mur ligase family, glutamate ligase domain APS55_RS05515 PF08245 Mur ligase middle domain APS55_RS05515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APS55_RS05520 PF03033 Glycosyltransferase family 28 N-terminal domain APS55_RS05520 PF04101 Glycosyltransferase family 28 C-terminal domain APS55_RS05525 PF03799 Cell division protein FtsQ APS55_RS05525 PF08478 POTRA domain, FtsQ-type APS55_RS05530 PF02491 SHS2 domain inserted in FTSA APS55_RS05530 PF11983 Membrane-attachment and polymerisation-promoting switch APS55_RS05535 PF12327 FtsZ family, C-terminal domain APS55_RS05535 PF00091 Tubulin/FtsZ family, GTPase domain APS55_RS05540 PF04472 Cell division protein SepF APS55_RS05550 PF05103 DivIVA protein APS55_RS05555 PF00133 tRNA synthetases class I (I, L, M and V) APS55_RS05555 PF08264 Anticodon-binding domain of tRNA APS55_RS05555 PF06827 Zinc finger found in FPG and IleRS APS55_RS05560 PF00313 'Cold-shock' DNA-binding domain APS55_RS05565 PF00293 NUDIX domain APS55_RS05575 PF01048 Phosphorylase superfamily APS55_RS05580 PF00266 Aminotransferase class-V APS55_RS05605 PF13538 UvrD-like helicase C-terminal domain APS55_RS05605 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain APS55_RS05605 PF14490 Helix-hairpin-helix containing domain APS55_RS05610 PF14572 Phosphoribosyl synthetase-associated domain APS55_RS05610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS55_RS05615 PF00248 Aldo/keto reductase family APS55_RS05620 PF13520 Amino acid permease APS55_RS05625 PF00781 Diacylglycerol kinase catalytic domain APS55_RS05630 PF17770 Ribonuclease J C-terminal domain APS55_RS05630 PF00753 Metallo-beta-lactamase superfamily APS55_RS05630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain APS55_RS05635 PF07288 Protein of unknown function (DUF1447) APS55_RS05645 PF01327 Polypeptide deformylase APS55_RS05650 PF00056 lactate/malate dehydrogenase, NAD binding domain APS55_RS05650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS55_RS05655 PF05256 Uncharacterised protein family (UPF0223) APS55_RS05660 PF00459 Inositol monophosphatase family APS55_RS05665 PF00009 Elongation factor Tu GTP binding domain APS55_RS05665 PF00679 Elongation factor G C-terminus APS55_RS05665 PF14492 Elongation Factor G, domain II APS55_RS05665 PF03144 Elongation factor Tu domain 2 APS55_RS05670 PF01098 Cell cycle protein APS55_RS05675 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) APS55_RS05685 PF01467 Cytidylyltransferase-like APS55_RS05690 PF05362 Lon protease (S16) C-terminal proteolytic domain APS55_RS05690 PF13180 PDZ domain APS55_RS05700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS55_RS05705 PF03772 Competence protein APS55_RS05705 PF00753 Metallo-beta-lactamase superfamily APS55_RS05705 PF13567 Domain of unknown function (DUF4131) APS55_RS05710 PF06144 DNA polymerase III, delta subunit APS55_RS05715 PF01649 Ribosomal protein S20 APS55_RS05720 PF00312 Ribosomal protein S15 APS55_RS05725 PF17770 Ribonuclease J C-terminal domain APS55_RS05725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain APS55_RS05725 PF00753 Metallo-beta-lactamase superfamily APS55_RS05735 PF03143 Elongation factor Tu C-terminal domain APS55_RS05735 PF03144 Elongation factor Tu domain 2 APS55_RS05735 PF00009 Elongation factor Tu GTP binding domain APS55_RS05740 PF05698 Bacterial trigger factor protein (TF) C-terminus APS55_RS05740 PF05697 Bacterial trigger factor protein (TF) APS55_RS05740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS55_RS05745 PF06689 ClpX C4-type zinc finger APS55_RS05745 PF10431 C-terminal, D2-small domain, of ClpB protein APS55_RS05745 PF07724 AAA domain (Cdc48 subfamily) APS55_RS05750 PF01926 50S ribosome-binding GTPase APS55_RS05760 PF01541 GIY-YIG catalytic domain APS55_RS05760 PF08459 UvrC Helix-hairpin-helix N-terminal APS55_RS05760 PF02151 UvrB/uvrC motif APS55_RS05765 PF01018 GTP1/OBG APS55_RS05765 PF09269 Domain of unknown function (DUF1967) APS55_RS05765 PF01926 50S ribosome-binding GTPase APS55_RS05770 PF00753 Metallo-beta-lactamase superfamily APS55_RS05775 PF10141 Single-strand DNA-specific exonuclease, C terminal domain APS55_RS05775 PF02272 DHHA1 domain APS55_RS05775 PF17768 RecJ OB domain APS55_RS05775 PF01368 DHH family APS55_RS05780 PF00156 Phosphoribosyl transferase domain APS55_RS05800 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal APS55_RS05800 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal APS55_RS05810 PF00717 Peptidase S24-like APS55_RS05810 PF01726 LexA DNA binding domain APS55_RS05815 PF05979 Bacterial protein of unknown function (DUF896) APS55_RS05820 PF03672 Uncharacterised protein family (UPF0154) APS55_RS05825 PF01553 Acyltransferase APS55_RS05830 PF05175 Methyltransferase small domain APS55_RS05835 PF01541 GIY-YIG catalytic domain APS55_RS05840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS55_RS05840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS55_RS05845 PF00318 Ribosomal protein S2 APS55_RS05850 PF00889 Elongation factor TS APS55_RS05855 PF00696 Amino acid kinase family APS55_RS05860 PF01765 Ribosome recycling factor APS55_RS05870 PF01255 Putative undecaprenyl diphosphate synthase APS55_RS05880 PF17820 PDZ domain APS55_RS05880 PF02163 Peptidase family M50 APS55_RS05885 PF03129 Anticodon binding domain APS55_RS05885 PF04073 Aminoacyl-tRNA editing domain APS55_RS05885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS55_RS05890 PF00929 Exonuclease APS55_RS05890 PF02811 PHP domain APS55_RS05890 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS55_RS05890 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS55_RS05890 PF11490 DNA polymerase III polC-type N-terminus II APS55_RS05890 PF14480 DNA polymerase III polC-type N-terminus I APS55_RS05890 PF14579 Helix-hairpin-helix motif APS55_RS05895 PF17384 RimP C-terminal SH3 domain APS55_RS05895 PF02576 RimP N-terminal domain APS55_RS05900 PF08529 NusA N-terminal domain APS55_RS05900 PF13184 NusA-like KH domain APS55_RS05900 PF00575 S1 RNA binding domain APS55_RS05905 PF04296 Protein of unknown function (DUF448) APS55_RS05910 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family APS55_RS05915 PF04760 Translation initiation factor IF-2, N-terminal region APS55_RS05915 PF00009 Elongation factor Tu GTP binding domain APS55_RS05915 PF11987 Translation-initiation factor 2 APS55_RS05920 PF02033 Ribosome-binding factor A APS55_RS05925 PF01509 TruB family pseudouridylate synthase (N terminal domain) APS55_RS05925 PF16198 tRNA pseudouridylate synthase B C-terminal domain APS55_RS05930 PF01687 Riboflavin kinase APS55_RS05930 PF06574 FAD synthetase APS55_RS05935 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding APS55_RS05935 PF01628 HrcA protein C terminal domain APS55_RS05940 PF01025 GrpE APS55_RS05945 PF00012 Hsp70 protein APS55_RS05950 PF00684 DnaJ central domain APS55_RS05950 PF01556 DnaJ C terminal domain APS55_RS05950 PF00226 DnaJ domain APS55_RS05955 PF06421 GTP-binding protein LepA C-terminus APS55_RS05955 PF03144 Elongation factor Tu domain 2 APS55_RS05955 PF00009 Elongation factor Tu GTP binding domain APS55_RS05955 PF00679 Elongation factor G C-terminus APS55_RS05960 PF00860 Permease family APS55_RS05965 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase APS55_RS05985 PF04452 RNA methyltransferase APS55_RS05990 PF04607 Region found in RelA / SpoT proteins APS55_RS05990 PF02824 TGS domain APS55_RS05990 PF13291 ACT domain APS55_RS05995 PF02580 D-Tyr-tRNA(Tyr) deacylase APS55_RS06000 PF13419 Haloacid dehalogenase-like hydrolase APS55_RS06005 PF03881 Fructosamine kinase APS55_RS06010 PF13393 Histidyl-tRNA synthetase APS55_RS06010 PF03129 Anticodon binding domain APS55_RS06015 PF00152 tRNA synthetases class II (D, K and N) APS55_RS06015 PF02938 GAD domain APS55_RS06015 PF01336 OB-fold nucleic acid binding domain APS55_RS06020 PF13333 Integrase core domain APS55_RS06020 PF00665 Integrase core domain APS55_RS06020 PF13276 HTH-like domain APS55_RS06030 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 APS55_RS06030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) APS55_RS06035 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase APS55_RS06040 PF01061 ABC-2 type transporter APS55_RS06045 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase APS55_RS06050 PF01261 Xylose isomerase-like TIM barrel APS55_RS06055 PF03618 Kinase/pyrophosphorylase APS55_RS06060 PF01165 Ribosomal protein S21 APS55_RS06065 PF09424 Yqey-like protein APS55_RS06070 PF02562 PhoH-like protein APS55_RS06075 PF02130 Uncharacterized protein family UPF0054 APS55_RS06080 PF01219 Prokaryotic diacylglycerol kinase APS55_RS06085 PF01926 50S ribosome-binding GTPase APS55_RS06085 PF07650 KH domain APS55_RS06090 PF02565 Recombination protein O C terminal APS55_RS06090 PF11967 Recombination protein O N terminal APS55_RS06095 PF02091 Glycyl-tRNA synthetase alpha subunit APS55_RS06100 PF02092 Glycyl-tRNA synthetase beta subunit APS55_RS06105 PF10410 DnaB-helicase binding domain of primase APS55_RS06105 PF08275 DNA primase catalytic core, N-terminal domain APS55_RS06105 PF01807 CHC2 zinc finger APS55_RS06110 PF04545 Sigma-70, region 4 APS55_RS06110 PF00140 Sigma-70 factor, region 1.2 APS55_RS06110 PF04542 Sigma-70 region 2 APS55_RS06110 PF04539 Sigma-70 region 3 APS55_RS06110 PF03979 Sigma-70 factor, region 1.1 APS55_RS06115 PF04816 tRNA (adenine(22)-N(1))-methyltransferase APS55_RS06120 PF01784 NIF3 (NGG1p interacting factor 3) APS55_RS06125 PF01546 Peptidase family M20/M25/M40 APS55_RS06125 PF07687 Peptidase dimerisation domain APS55_RS06130 PF07724 AAA domain (Cdc48 subfamily) APS55_RS06130 PF17871 AAA lid domain APS55_RS06130 PF00004 ATPase family associated with various cellular activities (AAA) APS55_RS06130 PF02861 Clp amino terminal domain, pathogenicity island component APS55_RS06130 PF10431 C-terminal, D2-small domain, of ClpB protein APS55_RS06140 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS55_RS06140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS55_RS06140 PF14579 Helix-hairpin-helix motif APS55_RS06140 PF02811 PHP domain APS55_RS06140 PF01336 OB-fold nucleic acid binding domain APS55_RS06145 PF02887 Pyruvate kinase, alpha/beta domain APS55_RS06145 PF00224 Pyruvate kinase, barrel domain APS55_RS06145 PF00391 PEP-utilising enzyme, mobile domain APS55_RS06150 PF17783 CvfB-like winged helix domain APS55_RS06150 PF13509 S1 domain APS55_RS06155 PF02899 Phage integrase, N-terminal SAM-like domain APS55_RS06155 PF00589 Phage integrase family APS55_RS06160 PF00583 Acetyltransferase (GNAT) family APS55_RS06165 PF02616 Segregation and condensation protein ScpA APS55_RS06170 PF04079 Segregation and condensation complex subunit ScpB APS55_RS06175 PF01479 S4 domain APS55_RS06175 PF00849 RNA pseudouridylate synthase APS55_RS06180 PF12822 ECF transporter, substrate-specific component APS55_RS06190 PF00270 DEAD/DEAH box helicase APS55_RS06190 PF00271 Helicase conserved C-terminal domain APS55_RS06200 PF02224 Cytidylate kinase APS55_RS06205 PF00575 S1 RNA binding domain APS55_RS06210 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APS55_RS06210 PF01926 50S ribosome-binding GTPase APS55_RS06215 PF00216 Bacterial DNA-binding protein APS55_RS06230 PF12627 Probable RNA and SrmB- binding site of polymerase A APS55_RS06230 PF13735 tRNA nucleotidyltransferase domain 2 putative APS55_RS06230 PF01743 Poly A polymerase head domain APS55_RS06235 PF00005 ABC transporter APS55_RS06235 PF16326 ABC transporter C-terminal domain APS55_RS06235 PF12848 ABC transporter APS55_RS06240 PF00303 Thymidylate synthase APS55_RS06245 PF00186 Dihydrofolate reductase APS55_RS06250 PF13472 GDSL-like Lipase/Acylhydrolase family APS55_RS06260 PF06855 YozE SAM-like fold APS55_RS06265 PF01926 50S ribosome-binding GTPase APS55_RS06270 PF01351 Ribonuclease HII APS55_RS06275 PF18255 DNA processing protein A sterile alpha motif domain APS55_RS06275 PF02481 DNA recombination-mediator protein A APS55_RS06280 PF01396 Topoisomerase DNA binding C4 zinc finger APS55_RS06280 PF01751 Toprim domain APS55_RS06280 PF01131 DNA topoisomerase APS55_RS06285 PF02899 Phage integrase, N-terminal SAM-like domain APS55_RS06285 PF00589 Phage integrase family APS55_RS06290 PF01263 Aldose 1-epimerase APS55_RS06295 PF02096 60Kd inner membrane protein APS55_RS06300 PF00708 Acylphosphatase APS55_RS06305 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS55_RS06305 PF00588 SpoU rRNA Methylase family APS55_RS06315 PF01638 HxlR-like helix-turn-helix APS55_RS06320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APS55_RS06320 PF01409 tRNA synthetases class II core domain (F) APS55_RS06325 PF03484 tRNA synthetase B5 domain APS55_RS06325 PF03483 B3/4 domain APS55_RS06325 PF03147 Ferredoxin-fold anticodon binding domain APS55_RS06325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APS55_RS06325 PF01588 Putative tRNA binding domain APS55_RS06330 PF02618 YceG-like family APS55_RS06335 PF00485 Phosphoribulokinase / Uridine kinase family APS55_RS06340 PF03449 Transcription elongation factor, N-terminal APS55_RS06340 PF01272 Transcription elongation factor, GreA/GreB, C-term APS55_RS06350 PF13333 Integrase core domain APS55_RS06350 PF00665 Integrase core domain APS55_RS06360 PF00905 Penicillin binding protein transpeptidase domain APS55_RS06360 PF03717 Penicillin-binding Protein dimerisation domain APS55_RS06365 PF00471 Ribosomal protein L33 APS55_RS06370 PF01812 5-formyltetrahydrofolate cyclo-ligase family APS55_RS06375 PF01694 Rhomboid family APS55_RS06385 PF00480 ROK family APS55_RS06400 PF00665 Integrase core domain APS55_RS06400 PF13333 Integrase core domain APS55_RS06410 PF13411 MerR HTH family regulatory protein APS55_RS06415 PF00120 Glutamine synthetase, catalytic domain APS55_RS06415 PF03951 Glutamine synthetase, beta-Grasp domain APS55_RS06430 PF00829 Ribosomal prokaryotic L21 protein APS55_RS06440 PF01016 Ribosomal L27 protein APS55_RS06445 PF01132 Elongation factor P (EF-P) OB domain APS55_RS06445 PF08207 Elongation factor P (EF-P) KOW-like domain APS55_RS06445 PF09285 Elongation factor P, C-terminal APS55_RS06450 PF03780 Asp23 family, cell envelope-related function APS55_RS06455 PF01029 NusB family APS55_RS06460 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APS55_RS06460 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APS55_RS06465 PF02601 Exonuclease VII, large subunit APS55_RS06465 PF13742 OB-fold nucleic acid binding domain APS55_RS06470 PF02609 Exonuclease VII small subunit APS55_RS06475 PF00348 Polyprenyl synthetase APS55_RS06480 PF01479 S4 domain APS55_RS06480 PF01728 FtsJ-like methyltransferase APS55_RS06485 PF13476 AAA domain APS55_RS06490 PF00625 Guanylate kinase APS55_RS06495 PF01192 RNA polymerase Rpb6 APS55_RS06500 PF04127 DNA / pantothenate metabolism flavoprotein APS55_RS06500 PF02441 Flavoprotein APS55_RS06505 PF18074 Primosomal protein N C-terminal domain APS55_RS06505 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APS55_RS06505 PF00271 Helicase conserved C-terminal domain APS55_RS06505 PF17764 3′ DNA-binding domain (3′BD) APS55_RS06505 PF04851 Type III restriction enzyme, res subunit APS55_RS06510 PF00551 Formyl transferase APS55_RS06510 PF02911 Formyl transferase, C-terminal domain APS55_RS06515 PF01189 16S rRNA methyltransferase RsmB/F APS55_RS06515 PF01029 NusB family APS55_RS06525 PF00069 Protein kinase domain APS55_RS06525 PF03793 PASTA domain APS55_RS06530 PF16745 RsgA N-terminal domain APS55_RS06530 PF03193 RsgA GTPase APS55_RS06535 PF00834 Ribulose-phosphate 3 epimerase family APS55_RS06540 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain APS55_RS06540 PF04263 Thiamin pyrophosphokinase, catalytic domain APS55_RS06545 PF00830 Ribosomal L28 family APS55_RS06550 PF03780 Asp23 family, cell envelope-related function APS55_RS06555 PF13684 Dihydroxyacetone kinase family APS55_RS06555 PF02734 DAK2 domain APS55_RS06560 PF00270 DEAD/DEAH box helicase APS55_RS06560 PF00271 Helicase conserved C-terminal domain APS55_RS06560 PF17191 RecG wedge domain APS55_RS06565 PF02504 Fatty acid synthesis protein APS55_RS06570 PF00550 Phosphopantetheine attachment site APS55_RS06575 PF14622 Ribonuclease-III-like APS55_RS06575 PF00035 Double-stranded RNA binding motif APS55_RS06580 PF06470 SMC proteins Flexible Hinge Domain APS55_RS06580 PF02463 RecF/RecN/SMC N terminal domain APS55_RS06585 PF02881 SRP54-type protein, helical bundle domain APS55_RS06585 PF00448 SRP54-type protein, GTPase domain APS55_RS06590 PF04297 Putative helix-turn-helix protein, YlxM / p13 like APS55_RS06595 PF02978 Signal peptide binding domain APS55_RS06595 PF02881 SRP54-type protein, helical bundle domain APS55_RS06595 PF00448 SRP54-type protein, GTPase domain APS55_RS06615 PF00886 Ribosomal protein S16 APS55_RS06625 PF01782 RimM N-terminal domain APS55_RS06625 PF05239 PRC-barrel domain APS55_RS06630 PF01746 tRNA (Guanine-1)-methyltransferase APS55_RS06635 PF01245 Ribosomal protein L19 APS55_RS06640 PF03577 Peptidase family C69 APS55_RS06645 PF01361 Tautomerase enzyme APS55_RS06650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS55_RS06650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS55_RS06660 PF17126 RsmF rRNA methyltransferase first C-terminal domain APS55_RS06660 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF APS55_RS06660 PF01189 16S rRNA methyltransferase RsmB/F APS55_RS06675 PF01070 FMN-dependent dehydrogenase APS55_RS06680 PF00288 GHMP kinases N terminal domain APS55_RS06680 PF08544 GHMP kinases C terminal APS55_RS06690 PF08544 GHMP kinases C terminal APS55_RS06690 PF10509 Galactokinase galactose-binding signature APS55_RS06690 PF00288 GHMP kinases N terminal domain APS55_RS06695 PF00929 Exonuclease APS55_RS06695 PF13307 Helicase C-terminal domain APS55_RS06710 PF00905 Penicillin binding protein transpeptidase domain APS55_RS06710 PF00912 Transglycosylase APS55_RS06715 PF03838 Recombination protein U APS55_RS06720 PF06908 YspA SLOG family APS55_RS06725 PF05103 DivIVA protein APS55_RS06735 PF01170 Putative RNA methylase family UPF0020 APS55_RS06735 PF02926 THUMP domain APS55_RS06740 PF01266 FAD dependent oxidoreductase APS55_RS06745 PF13456 Reverse transcriptase-like APS55_RS06755 PF01268 Formate--tetrahydrofolate ligase APS55_RS06760 PF01252 Signal peptidase (SPase) II APS55_RS06765 PF00849 RNA pseudouridylate synthase APS55_RS06765 PF01479 S4 domain APS55_RS06770 PF00156 Phosphoribosyl transferase domain APS55_RS06775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS55_RS06775 PF00117 Glutamine amidotransferase class-I APS55_RS06780 PF02142 MGS-like domain APS55_RS06780 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS55_RS06780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS55_RS06800 PF00255 Glutathione peroxidase APS55_RS06815 PF02645 Uncharacterised protein, DegV family COG1307 APS55_RS06820 PF05670 NFACT protein RNA binding domain APS55_RS06830 PF01223 DNA/RNA non-specific endonuclease APS55_RS06835 PF01625 Peptide methionine sulfoxide reductase APS55_RS06840 PF01641 SelR domain APS55_RS06850 PF02833 DHHA2 domain APS55_RS06850 PF01368 DHH family APS55_RS06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS55_RS06855 PF03466 LysR substrate binding domain APS55_RS06860 PF00521 DNA gyrase/topoisomerase IV, subunit A APS55_RS06860 PF03989 DNA gyrase C-terminal domain, beta-propeller APS55_RS06865 PF00204 DNA gyrase B APS55_RS06865 PF00986 DNA gyrase B subunit, carboxyl terminus APS55_RS06865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS55_RS06865 PF01751 Toprim domain APS55_RS06870 PF02660 Glycerol-3-phosphate acyltransferase APS55_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS55_RS06875 PF18719 ArlS sensor domain APS55_RS06875 PF00512 His Kinase A (phospho-acceptor) domain APS55_RS06880 PF00486 Transcriptional regulatory protein, C terminal APS55_RS06880 PF00072 Response regulator receiver domain APS55_RS06885 PF01783 Ribosomal L32p protein family APS55_RS06895 PF05636 HIGH Nucleotidyl Transferase APS55_RS06900 PF13649 Methyltransferase domain APS55_RS06910 PF01966 HD domain APS55_RS06915 PF01467 Cytidylyltransferase-like APS55_RS06920 PF01985 CRS1 / YhbY (CRM) domain APS55_RS06925 PF01926 50S ribosome-binding GTPase APS55_RS06935 PF00453 Ribosomal protein L20 APS55_RS06940 PF01632 Ribosomal protein L35 APS55_RS06945 PF05198 Translation initiation factor IF-3, N-terminal domain APS55_RS06945 PF00707 Translation initiation factor IF-3, C-terminal domain APS55_RS06950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS55_RS06950 PF02824 TGS domain APS55_RS06950 PF03129 Anticodon binding domain APS55_RS06950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS55_RS06955 PF01695 IstB-like ATP binding protein APS55_RS06955 PF07319 Primosomal protein DnaI N-terminus APS55_RS06960 PF07261 Replication initiation and membrane attachment APS55_RS06965 PF03477 ATP cone domain APS55_RS06970 PF01121 Dephospho-CoA kinase APS55_RS06975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APS55_RS06975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APS55_RS06975 PF06827 Zinc finger found in FPG and IleRS APS55_RS06980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS55_RS06980 PF00476 DNA polymerase family A APS55_RS06980 PF01367 5'-3' exonuclease, C-terminal SAM fold APS55_RS06985 PF01027 Inhibitor of apoptosis-promoting Bax1 APS55_RS06990 PF02875 Mur ligase family, glutamate ligase domain APS55_RS06990 PF08245 Mur ligase middle domain APS55_RS06990 PF01225 Mur ligase family, catalytic domain APS55_RS06995 PF01580 FtsK/SpoIIIE family APS55_RS06995 PF09397 Ftsk gamma domain APS55_RS06995 PF17854 FtsK alpha domain APS55_RS07000 PF01588 Putative tRNA binding domain APS55_RS07000 PF14794 Domain of unknown function (DUF4479) APS55_RS07005 PF00085 Thioredoxin APS55_RS07010 PF02390 Putative methyltransferase APS55_RS07020 PF00005 ABC transporter APS55_RS07025 PF01230 HIT domain APS55_RS07040 PF13514 AAA domain APS55_RS07045 PF00149 Calcineurin-like phosphoesterase APS55_RS07050 PF00905 Penicillin binding protein transpeptidase domain APS55_RS07050 PF00912 Transglycosylase APS55_RS07055 PF03485 Arginyl tRNA synthetase N terminal domain APS55_RS07055 PF00750 tRNA synthetases class I (R) APS55_RS07055 PF05746 DALR anticodon binding domain APS55_RS07070 PF00056 lactate/malate dehydrogenase, NAD binding domain APS55_RS07070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS55_RS07080 PF01177 Asp/Glu/Hydantoin racemase APS55_RS07090 PF02875 Mur ligase family, glutamate ligase domain APS55_RS07090 PF08245 Mur ligase middle domain APS55_RS07095 PF00733 Asparagine synthase APS55_RS07095 PF13537 Glutamine amidotransferase domain APS55_RS07100 PF17760 UvrA interaction domain APS55_RS07100 PF17755 UvrA DNA-binding domain APS55_RS07100 PF00005 ABC transporter APS55_RS07115 PF01741 Large-conductance mechanosensitive channel, MscL APS55_RS07120 PF01712 Deoxynucleoside kinase APS55_RS07125 PF01546 Peptidase family M20/M25/M40 APS55_RS07130 PF01256 Carbohydrate kinase APS55_RS07140 PF14667 Polysaccharide biosynthesis C-terminal domain APS55_RS07140 PF01943 Polysaccharide biosynthesis protein APS55_RS07145 PF09334 tRNA synthetases class I (M) APS55_RS07145 PF08264 Anticodon-binding domain of tRNA APS55_RS07145 PF13603 Leucyl-tRNA synthetase, Domain 2 APS55_RS07145 PF00133 tRNA synthetases class I (I, L, M and V) APS55_RS07150 PF06962 Putative rRNA methylase APS55_RS07155 PF07690 Major Facilitator Superfamily APS55_RS07160 PF02773 S-adenosylmethionine synthetase, C-terminal domain APS55_RS07160 PF00438 S-adenosylmethionine synthetase, N-terminal domain APS55_RS07160 PF02772 S-adenosylmethionine synthetase, central domain APS55_RS07240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS55_RS07245 PF09335 SNARE associated Golgi protein APS55_RS07255 PF00665 Integrase core domain APS55_RS07255 PF13333 Integrase core domain APS55_RS07265 PF13344 Haloacid dehalogenase-like hydrolase APS55_RS07270 PF06265 Protein of unknown function (DUF1027) APS55_RS07275 PF02872 5'-nucleotidase, C-terminal domain APS55_RS07285 PF00324 Amino acid permease APS55_RS07290 PF00871 Acetokinase family APS55_RS07295 PF02384 N-6 DNA Methylase APS55_RS07315 PF07963 Prokaryotic N-terminal methylation motif APS55_RS07325 PF00437 Type II/IV secretion system protein APS55_RS07330 PF01709 Transcriptional regulator APS55_RS07335 PF00356 Bacterial regulatory proteins, lacI family APS55_RS07350 PF01725 Ham1 family APS55_RS07355 PF01177 Asp/Glu/Hydantoin racemase APS55_RS07360 PF10702 Protein of unknown function (DUF2507) APS55_RS07365 PF00085 Thioredoxin APS55_RS07370 PF01713 Smr domain APS55_RS07370 PF00488 MutS domain V APS55_RS07385 PF06949 Protein of unknown function (DUF1292) APS55_RS07390 PF03652 Holliday junction resolvase APS55_RS07395 PF06135 IreB regulatory phosphoprotein APS55_RS07400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS55_RS07400 PF01411 tRNA synthetases class II (A) APS55_RS07400 PF02272 DHHA1 domain APS55_RS07405 PF00271 Helicase conserved C-terminal domain APS55_RS07405 PF00270 DEAD/DEAH box helicase APS55_RS07410 PF02272 DHHA1 domain APS55_RS07410 PF01368 DHH family APS55_RS07415 PF02699 Preprotein translocase subunit APS55_RS07420 PF17864 RuvB AAA lid domain APS55_RS07420 PF05496 Holliday junction DNA helicase RuvB P-loop domain APS55_RS07420 PF05491 RuvB C-terminal winged helix domain APS55_RS07425 PF07499 RuvA, C-terminal domain APS55_RS07425 PF01330 RuvA N terminal domain APS55_RS07430 PF01119 DNA mismatch repair protein, C-terminal domain APS55_RS07430 PF08676 MutL C terminal dimerisation domain APS55_RS07435 PF01624 MutS domain I APS55_RS07435 PF05190 MutS family domain IV APS55_RS07435 PF05192 MutS domain III APS55_RS07435 PF05188 MutS domain II APS55_RS07435 PF00488 MutS domain V APS55_RS07440 PF13277 YmdB-like protein APS55_RS07445 PF00013 KH domain APS55_RS07445 PF01966 HD domain APS55_RS07445 PF12072 Domain of unknown function (DUF3552) APS55_RS07450 PF00154 recA bacterial DNA recombination protein APS55_RS07455 PF02464 Competence-damaged protein APS55_RS07455 PF00994 Probable molybdopterin binding domain APS55_RS07455 PF18146 Damage-inducible protein CinA KH domain APS55_RS07460 PF01066 CDP-alcohol phosphatidyltransferase APS55_RS07465 PF13464 Domain of unknown function (DUF4115) APS55_RS07470 PF05193 Peptidase M16 inactive domain APS55_RS07470 PF00675 Insulinase (Peptidase family M16) APS55_RS07480 PF00497 Bacterial extracellular solute-binding proteins, family 3 APS55_RS07485 PF00005 ABC transporter APS55_RS07490 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS07495 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APS55_RS07500 PF03775 Septum formation inhibitor MinC, C-terminal domain APS55_RS07510 PF04085 rod shape-determining protein MreC APS55_RS07520 PF02875 Mur ligase family, glutamate ligase domain APS55_RS07520 PF08245 Mur ligase middle domain APS55_RS07525 PF08264 Anticodon-binding domain of tRNA APS55_RS07525 PF00133 tRNA synthetases class I (I, L, M and V) APS55_RS07525 PF10458 Valyl tRNA synthetase tRNA binding arm APS55_RS07530 PF08534 Redoxin APS55_RS07535 PF02926 THUMP domain APS55_RS07535 PF02568 Thiamine biosynthesis protein (ThiI) APS55_RS07540 PF00266 Aminotransferase class-V APS55_RS07545 PF06160 Septation ring formation regulator, EzrA APS55_RS07550 PF13185 GAF domain APS55_RS07555 PF00163 Ribosomal protein S4/S9 N-terminal domain APS55_RS07555 PF01479 S4 domain APS55_RS07565 PF05496 Holliday junction DNA helicase RuvB P-loop domain APS55_RS07565 PF16193 AAA C-terminal domain APS55_RS07565 PF12002 MgsA AAA+ ATPase C terminal APS55_RS07575 PF00582 Universal stress protein family APS55_RS07585 PF13302 Acetyltransferase (GNAT) domain APS55_RS07585 PF00958 GMP synthase C terminal domain APS55_RS07585 PF00117 Glutamine amidotransferase class-I APS55_RS07585 PF03352 Methyladenine glycosylase APS55_RS07585 PF13673 Acetyltransferase (GNAT) domain APS55_RS07590 PF07478 D-ala D-ala ligase C-terminus APS55_RS07590 PF01820 D-ala D-ala ligase N-terminus APS55_RS07600 PF00005 ABC transporter APS55_RS07605 PF07702 UTRA domain APS55_RS07605 PF00392 Bacterial regulatory proteins, gntR family APS55_RS07610 PF03180 NLPA lipoprotein APS55_RS07615 PF00528 Binding-protein-dependent transport system inner membrane component APS55_RS07620 PF09383 NIL domain APS55_RS07620 PF00005 ABC transporter APS55_RS07625 PF01098 Cell cycle protein APS55_RS07640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS55_RS07650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain APS55_RS07650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS55_RS07655 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS55_RS07655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS55_RS07660 PF00231 ATP synthase APS55_RS07690 PF01809 Putative membrane protein insertion efficiency factor APS55_RS07715 PF01381 Helix-turn-helix APS55_RS07810 PF04239 Protein of unknown function (DUF421) APS55_RS07815 PF00075 RNase H APS55_RS07845 PF01809 Putative membrane protein insertion efficiency factor APS55_RS07875 PF01960 ArgJ family APS55_RS07880 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS55_RS07880 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS55_RS07890 PF00665 Integrase core domain APS55_RS07890 PF13276 HTH-like domain APS55_RS07890 PF13333 Integrase core domain APS55_RS07895 PF00665 Integrase core domain APS55_RS07895 PF13333 Integrase core domain APS55_RS07990 PF00398 Ribosomal RNA adenine dimethylase APS55_RS07995 PF01751 Toprim domain APS55_RS07995 PF13331 Domain of unknown function (DUF4093)