APS55_RS00130 NONE
APS55_RS00135   23571 ..   23593 + -12.1  -6.11392   ATTAATAAACAAAAA           GACGGATAC ATTAA GTATCCGTC           TTTTTTTATTTGTTT 100 36
APS55_RS00155   28684 ..   28694 +    -4  -2.95962   AACATCTTGACGTAT                 TTTG CTG CAAA                 TAGTATTATTTTATA  48 81
APS55_RS00160   29092 ..   29110 + -11.8  -5.66338   TTATTGAAATTCTAA             GTAGGACA GTT TGTCCTAC             TTTTTTCTTATCTTT 100 26
APS55_RS00165   29757 ..   29778 + -11.7    -5.252   GTTAAGTAAACAAAA           GAAGCTATC AAAT GATAGCTTC            TTTTTTATAAGAATA 100 32
APS55_RS00180   31370 ..   31395 +    -9  -5.37043   ATTGATAAATAAAAA         GCACCATCAC TTAATT GTGAAGGTGC          TTTTTTATGTACGCT 100 47
APS55_RS00430   66786 ..   66817 +  -5.2  -5.65513   GTTAGATTATTTAAT      TGCTCTGATTGGCT TTTT AGCTGATTGGAGTA       TTTTTTTAATTCCTC  85 91
APS55_RS00440   67892 ..   67906 +  -2.1  -3.55973   AATGGTTATTCGTTG               CCAGT CAGAC ATTGG               TTCATTGTTACCTTC  48 268
APS55_RS00455   69081 ..   69096 +  -4.8  -5.14698   ATGTTTTTGTATTCT              TTATCA CAAA TGATAA               TTTTGTTTTGAATTT  75 140
APS55_RS00465   70201 ..   70224 +  -9.6  -5.68489   GTCTTTAGTAAAAAA          GCAGGACATT TTCA AATGCCCTGC           TTTTTTATTGTTATA 100 33
APS55_RS00470 NONE
APS55_RS00475 NONE
APS55_RS00480   71668 ..   71688 +  -9.8  -5.08824   ATATCTTAGTAAAAA            GGAACAGT TAAAT ACTGTTCC            TTTTTTAAATAAACA 100 32
APS55_RS00495 NONE
APS55_RS00500   75236 ..   75250 +  -4.2  -2.53911   GGAATATTGAGTATA               CTGGAT TCG AACCAG               TAAATTAAGGATTCA  46 169
APS55_RS00510   75504 ..   75524 + -11.2  -5.68438   GATAATAAAGAAAAA            GACAGCCA AATAA TGGCTGTC            TTTTTTGTTTGCTAG 100 38
        ssrA   76714 ..   76752 +  -8.4   -5.8901   ATCGTTTAGAAAAAA  GCTGTTGTAATCAACGA GTAAAA TCATTG-TTACAACAGC   TTTTTTATTTTCTAT 100 37
APS55_RS00540   82975 ..   83012 + -14.3  -4.94487   AGTTGTCTGTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 67
APS55_RS00545 NONE
APS55_RS00550   84857 ..   84880 +  -6.8  -2.87996   TCTTTCTTTGTCCTT          GAACGAAGTT AACA AACTTAGTTC           TAATTCTGGATTTGA  57 511
        asnS   90478 ..   90498 +  -9.8  -4.63218   AATAAGTTTTAAAAA            GAGCATTC GTTTA GAATGCTC            TTTTATTAAAGGAGA 100 39
APS55_RS00580   91125 ..   91169 + -23.8  -5.13722   ATTATATTGTTTTTC CTAGGCGGAAAGTTTCCGGT ATTGA ACCGGTGACTTTCCGCCTAG TTTTGTTTTAATACG 100 84
APS55_RS00600   93572 ..   93594 +   -15  -5.51046   AATCCAATAAAAGAA           GACCTACCAA TAA TTGGTAGGTC           TTTTTTGTATGTTTA 100 40
APS55_RS00615   97130 ..   97152 + -10.7  -5.63504   ATAGAAGTAAAAAAA           GATGGTATC AAATC GATACCATC           TTTTTTTGTGGAATT 100 37
APS55_RS00630  101335 ..  101357 +   -15  -5.47399   CATATAAAATAAAAA           GGACTTACCA AAT TGGTAAGTCC           TTTTTTTACGCTTAA 100 34
APS55_RS00680  112845 ..  112864 +  -9.3  -5.60864   AAGAATAGTAAAAAA            GACAGCC TTTATC GGCTGTC             TTTTTTTAGTCTGTG 100 33
APS55_RS00695  116425 ..  116446 +  -9.5  -5.55698   ATCAAGGTAAAAAAA           TAAGCATCC AGCT GGGTGCTTA            TTTTTTTAGGTTATA 100 23
APS55_RS00760  129240 ..  129259 +  -2.9  -2.61199   TGCATTGGTGATTAA            GTCAGAT AAAATC ATTTGAC             CTTAATTGACCATTG  40 34
        clpP  129936 ..  129957 + -11.7  -5.63504   TTAGATAATAAAAAA           GACGTTAAC TTTG GTTAACGTC            TTTTTTTGTGCCCTT 100 41
APS55_RS00850  150080 ..  150124 + -10.9  -3.91905   GAAGTAGATCATGAT CCATACAAAAAAGAATGACCA AGG TGGCCATTCTTTTTTTAGTGG TTATCTTTACTTGTG  95 8
APS55_RS00875  156184 ..  156206 + -13.6  -5.66229   TGAATAAACAAAAAA           GATGAATCCA TTT TGGATTCATC           TTTTTTATTCTTCAT 100 34
APS55_RS00960  167663 ..  167688 +  -9.7  -4.26475   ATAAAATGTTGTTTT         TGGCGAAACCG CTAA TGGTCTCGCCA          TATTTTTTCTCAAGT  91 69
        nrdE NONE
        nrdF  170965 ..  171000 +   -10  -5.33405   TTAGATGCAAAAAAA    TACCCGATACAGA-ATT ATT AATATCTATATCGGGTA    TTTTTATTTACTCAA 100 94
        rpiA  186854 ..  186884 + -16.4  -5.93252   AATAATTAATTTAAA       CCGTGATAGTAAGT ACG ACTTATTATCACGG       TTTTTTGTTTTTAAA 100 36
APS55_RS01065  188301 ..  188321 + -12.7  -5.18995   ATAACATACAAAAAA            GAGCTGATA ATT TATCAGCTC            TTTTTATATTGTCTT 100 37
APS55_RS01080  191335 ..  191356 + -13.1  -5.37043   TGATAACTAAAAAAA           GGTTCTGGT TAAT ACCAGAACC            TTTTTTATATCCCCT 100 31
APS55_RS01130  198948 ..  198972 +    -8  -5.60864   AAGCAAAATAAAAAA         GTACA-TCGAC ATTA GTCGAATGTAC          TTTTTTTACTATCTA  95 30
APS55_RS01255  224276 ..  224300 +  -7.7  -5.45802   TTGATTAGATATTAA          GTCGAGGTGCA CTT TGCTCCCCGGC          TTTTTATTTTGGGCA  95 50
APS55_RS01260  225063 ..  225085 +   -15  -5.77988   TATCGAAACAAAAAA           GGATGCGAAT TAA ATTCGCATCC           TTTTTTTATGTATGT 100 44
APS55_RS07695 NONE
APS55_RS01290  230725 ..  230747 +   -15  -5.88197   AAATATGTAAAAAAA           GACATATCCG AAA CGGATATGTC           TTTTTTTATCTTTAC 100 31
APS55_RS01320 NONE
        yidA  237768 ..  237792 + -15.9  -5.69473   AATCATAAACAAAAA          GAACTCACTTC ATT GAAGTGAGTTC          TTTTTTTATAGTGTG 100 43
APS55_RS01410  255881 ..  255902 +  -8.8  -5.33124   TAACCAACAAAAAAA           GACCAATC CGTAAC GATTGGTC            TTTTATTTTATTATT 100 38
APS55_RS01460  269594 ..  269615 + -10.3  -5.73978   AAGAAAAACTAAAAA           TGAATTCCA AGTA TGGAATTCA            TTTTTTATTTGTAAT 100 29
APS55_RS01465 NONE
APS55_RS01470 NONE
APS55_RS01475  272268 ..  272290 + -10.7  -5.63504   TAACTAAAATAAAAA           TCCATACGA ATTAA TCGTATGGA           TTTTTTTATACCCTT 100 38
APS55_RS01490  275509 ..  275533 + -15.9  -5.85244   AAAACTATTAAAAAA          CATCGGTGAAA AAA TTTCACCGATG          TTTTTTCTTTTAATT 100 46
APS55_RS01495  276797 ..  276819 +  -8.4  -4.90217   TCTAATTATTAAAAA           GTACTGGCGG TTA TCGCTAGTGC           TTTTTAGTATATTTG  90 36
APS55_RS01500  277999 ..  278030 + -10.2  -5.85425   TATAAAACAAAACTA      AAAAAGCACCGGTC AATT GACCAGTGCTTTTA       TTTTTTCTTTGTTTA 100 36
APS55_RS01580  293053 ..  293094 +    -3  -5.64274   AATTAGCCTAAAAAA TCCCCTCGTGCTAGCTTGT TAAAC GCAAACCA-CACGAGAGGA TTTTTTTATGAATGA  78 64
APS55_RS01585  293819 ..  293840 + -11.7  -5.63236   TTAGCAAATAAAAAA           GAGTAACCA CTAT TGGTTACTC            TTTTTGTTTTTGAAT 100 20
APS55_RS01620  302104 ..  302127 + -11.1  -4.90381   ATCCATAATAAAAAA          GACGCTATC GTTTGG GATAGCGTC           TTTTATTCTATTCGA 100 412
APS55_RS01630  303153 ..  303177 +   -10  -5.87996   TACCTAAAATAAAAA          GCCGTGTTGC TTAAT GCAACACGAC          TTTTTTTATTACTTA 100 29
APS55_RS01650  304846 ..  304874 +  -7.5   -5.1675   TGAACAAATAAAAAA        TGCATGCAGACAA TTT TTATCTACATGCA        TTTTTTAGTGCATAA  86 30
        rlmD NONE
APS55_RS01670  309501 ..  309523 +  -9.2  -5.56112   CAATTTAAAAGAAAA           GACCCAAGAT AAT ATCTTGAGTC           TTTTTTAGTTTTTAT 100 33
APS55_RS01680 NONE
APS55_RS01685  313093 ..  313116 + -15.4  -5.70522   AAGTCAAACAAAAAA          GCCCCTATCT TAAA AGATAGGGGC           TTTTTTATTATTCTT 100 39
APS55_RS01715 NONE
APS55_RS01720  403960 ..  403997 + -14.3  -4.94487   TTTCGCTGGTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 57
APS55_RS01725 NONE
APS55_RS01730  405446 ..  405460 +  -4.2   -4.6635   ACTTTTGCCACAAGA               GCGTCA ATT TGACTC               TTTTGTTGAGCATTT  68 115
APS55_RS01750 NONE
APS55_RS01755  410530 ..  410551 + -13.1  -5.63103   GATTGTATGTAAAAA           GACCAACTC ATCC GAGTTGGTC            TTTTTTTACTTAAAG 100 41
APS55_RS07935  419758 ..  419775 +  -8.4  -4.89852   TCACAAACAAAAAAA             GACGCC AATAAA GGCGTC              TTTTTGTAGATATAA  90 15
APS55_RS01825  426667 ..  426689 + -10.7  -5.86465   TAAAATCCAAAAAAA           GACGATTAC TAAAT GTAATCGTC           TTTTTTTATCTTCTT 100 51
APS55_RS01840  430019 ..  430040 +  -9.5  -5.74086   ATAACTAGAATAAAG           CGACCAATT GAAA GATTGGTCG            TTTTTTATTTGCTTT 100 33
APS55_RS01845  431208 ..  431236 +  -4.5  -4.48741   TCTTCATCTTCTTGG        CGTAGACTCTAAC TTG GTTATTGTCCACG        TTTTCTAATGACTTA  66 351
APS55_RS01855  432747 ..  432771 +  -9.4   -5.4505   AAACTAGCAACCAAA          TCTCGATTTC GTTTA GAAGTCGAGA          TTTTTTATTAACAAA 100 34
APS55_RS01860  433921 ..  433945 + -11.6  -5.69793   ACAAGTAAGCAAAAA          GGACTTAAAC CTCTC GTTTAAGTCC          TTTTTTATTTAGTCT 100 33
APS55_RS01875  437032 ..  437060 +    -9  -4.98531   CAGACCATAAAAAAA        GAGTTCCAAAAT TTCAT GTTTTGGGACTC        TTTTTGGTTTAACAA  93 31
APS55_RS01890  440354 ..  440373 + -10.8  -5.58074   ATAAAATGTAAAAAA            CTCCAGAA TATT TTCTGGAG             TTTTTTTCGTAATTA 100 30
APS55_RS01900  442781 ..  442808 + -17.2  -4.65168   TGGTTAAATAAAAAA        GAGCGTAACTTC AAAT GAAGTTACGCTC         TTTTTCGCATCTACT 100 30
APS55_RS01915  444910 ..  444943 + -14.1  -3.97368   AAAATTTATGTAAAC     AAAAAGAACCGTATC AAAA GATACGGTTCTTTTC      TTTATGAATTAACCA 100 28
APS55_RS01940  450324 ..  450361 + -13.7  -5.40464   TCGTCACTTTGTGCT   GAGGTGTAATCCA-GTTG TAC TAACTTGGATTGCACCTC   TTTTTGTTTGTCATA 100 426
APS55_RS01960  454519 ..  454543 +  -6.6  -3.15663   AAAAAAAATTAGTAA          GTAATTGTAC TAAGT GTATAATTAC          TTACTAACAATACAT  62 39
APS55_RS01965  455195 ..  455218 + -15.4  -5.95539   GAACAGTGTTACGAC          GCCCTTGTAC GAAA GTACAAGGGC           TTTTTTTATTTACCA 100 360
APS55_RS01970  456795 ..  456813 +  -6.8  -3.79138   TAGAATAACGGTAAA             TCGTTGAT GTC ATCAATGA             TTTGATCACTATATT  69 338
APS55_RS07710  466663 ..  466684 +  -7.4  -6.28401   CGTAACAAATAAAAA           GTTATCAC AAAAAA GTGATAAC            TTTTTTTGTTTTTTA  95 29
APS55_RS02025 NONE
APS55_RS02030  468010 ..  468043 + -14.1  -4.78326   AATCGAATACTAAAA     TAAAGAAGGCCTGAC AAAT GTCAGGTCTTTTTTA      TTTATTTCTTTGCAC 100 28
APS55_RS02045  470013 ..  470047 + -12.5  -3.68265   CGGTATTAAAAAAGA    TAAATAAAGACCTGAC GTTT GTCAGGTCTTT-TTTA     TTTAAAGTTCAATTT 100 19
APS55_RS07715  472551 ..  472570 +  -7.8  -4.92777   CACATTAAATAAAAA            GACGCCAC ATAT GTGACGTC             TTTTTGCTTAGTCTT  88 29
APS55_RS02130 NONE
APS55_RS02135 NONE
APS55_RS02140  491524 ..  491553 + -16.7  -4.28188   GAAGACATTAGATAA       TAAAAAAGACGCC GATT GGCGTCTTTTTTA        TTTGTCTTCTCCGTC 100 26
APS55_RS07945  492088 ..  492107 +   -10  -5.30616   CATAAAAAATAAAAA            GGCTGCTC GTTT GAGCAGTC             TTTTTGTTTACCTAA 100 29
APS55_RS02160  504397 ..  504427 + -12.8  -3.64882   CCATGAAGGCAAACA       AAAAAGAACGACTA TAA TAGTCGTTCTTTTA       TTATGCTTGTTCTTC 100 9
APS55_RS02170  505687 ..  505708 + -13.1  -4.98255   TTATGCAAAACAAAA           GAACGGCTA ATCC TAGCCGTTC            TTTTTGTGCTTAAAA 100 16
APS55_RS02175  506386 ..  506407 +  -9.5  -5.34381   CAATGTACTAAAAAA           GAATGGCTA GAAT TAGCCGTTC            TTTTTGTTTACCTTT 100 45
APS55_RS02185  507217 ..  507259 + -12.4  -3.47762   AAAGTGGAAATCACA CAATAATAAAAAGCTCTCC ATGTTA GGAGAGCTTTTT-TTGTTG TCTTTCATAAATATT 100 20
APS55_RS02195  508590 ..  508634 + -11.7  -5.54907   TGGTTATGCTATTTT CTGGGAGGAAT-TGATCCGGT ATTCA ACCGG-TGACATTCCTCCCAG TTTTTGTTTTATACG 100 194
APS55_RS02240  516780 ..  516797 +  -9.9  -5.07053   ACGCCAAATAAAAAA             GCACACA TTAA TGTGTGC              TTTTTTCCAATCATT 100 30
APS55_RS02250  518938 ..  518957 + -12.2  -5.69793   GGATATATTAAAAAA            GCATACGC TTCG GCGTATGC             TTTTTTATTTGATAT 100 30
APS55_RS02290 NONE
APS55_RS02295 NONE
APS55_RS02300  528516 ..  528558 + -20.8  -3.92075   AAAGAAACATCATGG CTAAGAAAATCCCCTCGGCA ATC TGCCGGGGGGATTTTTTTCG TTTATCGATAGAGAT 100 22
APS55_RS02305  530095 ..  530124 + -15.3  -3.07291   AATGTGATTAACTAT       TAAAAAAAGAGCC GGTT GGCTCTTTTTTTA        TTGCATAAAATAGTT 100 23
APS55_RS02310  531471 ..  531513 + -28.2  -2.72991   TGAAGATTTTCCCTA TGAACACCTTATCCCTATAC GTA GTATAGGGATAAGGTGTTCA TCGTTAAAGCTATAA 100 87
APS55_RS02315  533395 ..  533412 +  -5.7  -2.84841   AATAAACATAAAAGG             TATAATG TAGA CATTATA              TAAATTTTATTAAGA  55 54
APS55_RS02320  534851 ..  534875 + -10.2  -5.80951   TATATAATTTTTAAA          TCTGTTAGAA TATAT TTCTAACAGA          TTTTTTATTTTGCCT 100 41
        nrdI  535367 ..  535393 +  -9.5  -5.85244   TACGATAAATAAAAA         GGATTCGTTTC ATATC GAAACGAACCC         TTTTTTATTTTGATT 100 29
APS55_RS02335  538343 ..  538358 +  -6.2  -2.70452   AATGTTAAAATCTAA              GTGTAT ATTT ATACAC               AATTTTCTTTAAAAA  57 64
        gndA  539850 ..  539868 + -11.8   -5.1675   TGATCACAATAAAAA             GAGACGAT TAA ATCGTCTC             TTTTTTAATACATAC 100 50
APS55_RS02345  541523 ..  541544 + -10.3  -5.61824   TATGTAAAAAGAGAA           CCTAATCAT TGAT ATGATTAGG            TTTTTTTGCATTTTG 100 34
APS55_RS02375 NONE
        carB  552092 ..  552127 + -10.6  -5.22481   GGTAGAAAAGATATA    AAAAAAGACCTAATCC AAAT GGATTAGGTCTTTTAA     TTTTGTTTATTTATG 100 25
APS55_RS02405  560457 ..  560473 +  -8.7  -5.06505   GGCTTAATTTACAAG              CGTTGCA AAA TGCAGCG              TTTTTCTATATACTT 100 90
APS55_RS02410 NONE
APS55_RS02415  561267 ..  561288 + -11.7  -5.74086   ATTGCATTAAAAAAA           GACGTTCAT TATG ATGAACGTC            TTTTTTGTTTGGTTT 100 31
APS55_RS08000 NONE
APS55_RS02430  563365 ..  563392 + -12.1  -5.63517   TAGTCTATCCAAGTG        TACCCTTCCAC CGTCGT GTGGGAGGGTA         TTTTTTATTTACGGC 100 252
        tenA NONE
        thiD NONE
APS55_RS02445 NONE
        thiM  566355 ..  566374 + -12.2  -5.45802   AGGTTAATCAAAAAA            GGACTGAC AAAC GTCAGTCC             TTTTTATTTTGCAGC 100 34
APS55_RS02485  576181 ..  576196 + -10.4  -5.87996   AAATATTAAGTAAAG              CCACCC TTTT GGGTGG               TTTTTTTATTGGTTA 100 40
APS55_RS02490  577682 ..  577707 + -11.2  -4.84274   TAATCAAAAATTAAA         CCCCGGTCAGA TTTCT TC-GACCGGGG         TTTTTGGTATAATTA 100 49
APS55_RS02495  578550 ..  578569 + -10.8  -5.74086   TTGAATAATAAAAAA            TCCATAGG TTAT CCTATGGA             TTTTTTGTTTGGTTT 100 33
         ade NONE
APS55_RS02515 NONE
APS55_RS02520  585264 ..  585285 +  -8.8  -5.52986   AGAATAAATAAAAAA           GCTTATCC CGTTAA GGATAAGC            TTTTTTTAGTGCAAT 100 41
APS55_RS02565  595661 ..  595680 + -12.2  -5.82281   CATAACTGATAAAAA            GACATCGC TTAA GCGATGTC             TTTTTTTGTGTATTT 100 37
APS55_RS02585  602016 ..  602046 + -17.1  -5.76633   GACACCCATGCACTG       CACCCCAAAGTTT GTACA AAACTTTGGGGTG       TTTTTTTGTGTCTAA 100 44
APS55_RS02590 NONE
APS55_RS07890 NONE
APS55_RS07895  603765 ..  603786 +  -5.1  -3.73097   ACCAAGAAAGTAAGT           GTCATTGCC GTAT GGTACTGAC            TATTTGTTAGATTAT  60 361
APS55_RS02610  606979 ..  606998 +  -6.5   -5.4756   AAAGATAATAAAAAA            GAACTTC AATAAA GAAGTTC             TTTTTTATTCGGATT  86 14
        nrdD NONE
        nrdG NONE
        sufC NONE
APS55_RS02630 NONE
APS55_RS02635 NONE
APS55_RS02640 NONE
        sufB  614945 ..  614969 + -16.5  -4.97158   GTTGGTTAAAACTAA          CGCCCCTAGAG CTT TTCTAGGGGCG          TTTTGTTTCATGTGA 100 32
APS55_RS02650  616445 ..  616475 + -14.3  -4.67038   AACGGTGAAAGCTAA       TAAAAAAGAGCTC GCATA GAGCTCTTTTTTA       TTTTAGTTTTACAAG 100 26
APS55_RS02655  616858 ..  616874 +  -9.5  -5.48787   TATATAACTAAAAAA              GAACTCA AAA TGAGTTC              TTTTTTATATCTTCT 100 30
        rpmH  643512 ..  643533 + -13.1  -4.99056   GTCATTGACTGTATA           GACCACTGA CCAT TCAGTGGTC            TTTTTCATTATATTG 100 25
        rnpA NONE
        yidC  644775 ..  644798 +   -14  -5.76633   CGTAAATAATAAAAA          GCGTCTGATT TTAT AATCAGACGC           TTTTTTTGTGTATCA 100 32
APS55_RS02785  645626 ..  645636 +  -2.6  -3.51365   ATTGACAAAACCGGA                 TAAA GTT TTTA                 TTATATAAAGTATCA  46 49
        mnmE  647179 ..  647194 +  -6.2  -4.72272   AGGAAAATAGTTAAT              TGTTTC ATGT GAAACA               TTTTTAATGGAGGAA  78 31
        mnmG  649153 ..  649177 + -15.1  -5.55769   AAATAGGTAAAAAAA          GCCGTCTAAAC ATT GTTTAGGCGGC          TTTTTTATTATCGAA 100 35
        lepB NONE
        lepB  651632 ..  651642 +  -5.4  -4.00469   TAACCTTTTTAACGG                 GCTT TAC AAGC                 TTTAATTGGTATTCA  63 452
APS55_RS02820 NONE
APS55_RS02825 NONE
APS55_RS02830  656433 ..  656459 + -14.6  -5.60993   ACCGCGATTTATTCG         TCCTCTTGGATA TCT TATCCAAGGGGA         TTTTTTTATACCCAA 100 292
APS55_RS02835 NONE
        argH NONE
APS55_RS02845 NONE
APS55_RS02850  661933 ..  661952 + -10.8  -5.01845   ATAAATACGTAAAAA            GACCAACA TAAA TGTTGGTC             TTTTTGATTATTCTC 100 48
APS55_RS02855  662225 ..  662248 +  -4.6  -2.95177   ATAAACGGGGGAATA          TGAAACCATG TTTT TATGGATTCA           CTTAATTTTTTGCGG  51 37
APS55_RS02860  662623 ..  662648 + -14.9  -5.57396   CTGCGTATCTAAAAA         GAGAGTGAACA AATA TGTTCACTCTC          TTTTTTATTGGTTGT 100 59
APS55_RS02885 NONE
APS55_RS02890  671429 ..  671455 + -13.8  -4.96427   TGGATTGAAAAATAA         AAAGAGCGCCTA TAT TAGGCGCTCTTA         TTTGTTTTCTTATTC 100 26
         cls  676052 ..  676068 +    -8  -5.65927   ATAAACTAAAAAAAA              TCCCAC ATTTC GTGGGA              TTTTTTGTTTACATC  95 37
APS55_RS02930  678963 ..  678989 + -13.8  -3.39595   AATAATATATAAACT         AAAAACCTCCCG TGC CGGGAGGTTTTA         TTGTACATAATTAAG 100 76
APS55_RS07905 NONE
APS55_RS02940  681404 ..  681423 +  -7.8  -5.38047   ATTGTATTAAAAAAA            GAGACCAC GCCC GAGGTCTC             TTTTTTATATGAATA  95 167
APS55_RS02965 NONE
APS55_RS02970  685194 ..  685217 +  -3.2  -2.94337   TAATACAAACTTTAT          TAACGTAACA CTGA TGTTTTGTTA           TACTGTTTTCAAATA  44 38
APS55_RS02975  685974 ..  685992 +  -9.6  -4.77165   AATGCATTAAAAAAA             CCAGGTTA TTT TGACCTGG             TTTTATTGTGACAAA 100 40
APS55_RS02980  687378 ..  687400 +  -6.3  -5.94214   AGCCTAAAATAAAAA           CGTCTGATT ATTTC GATCAGGCG           TTTTTTTGTTGTATT  95 34
APS55_RS02985 NONE
        lepA  689931 ..  689954 +   -11  -4.91109   TATAGAATAAAAAAA          GCACCCAAGC ATAA GCTTGTGTGC           TTTTTATGATCGAAA 100 31
APS55_RS03010 NONE
APS55_RS03015  693524 ..  693547 +   -14  -5.12474   ATTTAAAACATATAA          GCCATAAAGC AAAA GCTTTATGGC           TTTTTATGTCTTATC 100 35
APS55_RS03025  694995 ..  695014 + -12.2   -5.4659   AATGAATATAAAAAA            GAGACCTC CGCA GAGGTCTC             TTTTTATTTGTCTTA 100 40
APS55_RS03040 NONE
APS55_RS03045  698532 ..  698554 + -13.5  -5.42131   TTCACATGAAACGAA           GCCACACCA ATAAA TGGTGTGGC           TTTTTTGTATGATTC 100 47
APS55_RS03050  700153 ..  700181 +  -2.6  -4.09685   AAACTCCTTTAAAGC        TATTGTCATC TAAAAAAAT GATGATAATA        TTTTCAACAATCAAA  53 87
APS55_RS03055  701639 ..  701661 + -11.4  -5.58074   AAATCTAAACAAAAA           GAGTTAACCA TTT TGGTTAGCTC           TTTTTTTAGTGGTTA 100 39
APS55_RS03070  703981 ..  703998 +  -9.9  -4.96762   CAAATAAACAAAAAA             CACTCCT AAAA AGGAGTG              TTTTTCTGATCTATC 100 34
APS55_RS03080 NONE
        addA  712782 ..  712809 + -12.9  -5.39681   AATTAAGTAAAAAAA        TAACCCTGAAC ATATTC GTTCAGGGTTA         TTTTTATTTGCTTAT 100 31
APS55_RS03100  716662 ..  716691 + -12.3  -3.12749   AAGTATATGTAATTA       AAAAAGACTAGGC ATTT GCCTAGTCTTTTA        TATTAAAATTATTAA 100 29
APS55_RS03115  719059 ..  719081 + -12.1  -6.08342   GAAGTAAAACAAAAA           GCCTAACGT TTAAC ACGTTAGGC           TTTTTTTATTTGTTA 100 34
APS55_RS03140  725711 ..  725735 +  -8.6  -5.69793   TCTGAATAATAAAAA          GAGACCGTTT GGTAG AAACGGCCTC          TTTTTTATTTAGTGT 100 41
APS55_RS07955  727195 ..  727205 +  -2.4  -3.43492   TATGTAGGAAATGTA                 GACG GAA CGAC                 TTCTCATAACTATAA  45 82
APS55_RS03150  728211 ..  728241 +  -4.1  -3.70919   ACGAAATTATCTTTA       TCCACGTTTTTTT TGAAC AAAAATAAGTGGA       TTATTAACATTTGAC  55 202
APS55_RS03155  729082 ..  729097 + -10.4  -5.60993   TAGCGCACAAAAAAA              GACGCC CTTC GGCGTC               TTTTTTTATACACAC 100 38
APS55_RS03165  731786 ..  731805 + -12.2  -5.52909   GAGATAAATAAAAAA            GCCTAAGC GAAA GCTTAGGC             TTTTTTTGCATGTTG 100 34
APS55_RS03170  735594 ..  735609 +  -8.2   -5.7946   GCGTAAAATAAAAAG              GTCCGC TTAG GCGGGC               TTTTTTTGTTAAAAA 100 43
APS55_RS03175  738811 ..  738855 + -11.7  -5.54907   TGGTTATGCTATTTT CTGGGAGGAAT-TGATCCGGT ATTCA ACCGG-TGACATTCCTCCCAG TTTTTGTTTTATACG 100 79
APS55_RS03220  745510 ..  745532 +   -15   -5.4505   CGGGATACTAAAAAA           CACGCTATGA ATT TCATAGCGTG           TTTTTTGTTAGGGGG 100 30
APS55_RS03230  748717 ..  748740 + -15.4   -5.1287   TAGCATAAAGAAAAA          GGCGATAGTC AAAT GACTATCGCC           TTTTTTGAATCTGGA 100 33
APS55_RS03255  752069 ..  752086 +  -5.6  -5.52384   ATGAAGAATGAAGGA             CACTGA TATTTT TCAGTG              TTTTTTTAATACAAA  88 43
APS55_RS03260 NONE
APS55_RS03265 NONE
APS55_RS03270  754534 ..  754581 + -17.6  -4.97461   TAAATAATGCAGAAT TAGTATAAAAAAGCAGCTAAGAA TAT TTCTTAGCTGCTTTTTTA-ATTA TTTTTGGTGTTTCTT 100 18
APS55_RS03295 NONE
APS55_RS03300  758515 ..  758552 + -14.3  -4.94487   AAAAGACTCTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 41
APS55_RS03305 NONE
APS55_RS03310  759939 ..  759958 +  -6.4  -5.59534   TTTAGGGGTTCAGGT            CACTCAGC AATT GCTGAGTC             TTTTTTGTTATCCTT  90 53
APS55_RS03345  764838 ..  764882 +  -8.1  -5.54907   TGGTTATGCAATTTT CTGGGAGGAAT-TGATTCGGT ATTCA ACCGG-TGACATTCCTCCCAG TTTTTGTTTTATACG  95 248
APS55_RS03370  769421 ..  769440 +  -7.9  -5.71712   CATTTATTTATGAGA            GCGTTGA TTAAAT TCAACGC             TTTTTTTATATAAAA 100 45
        rlmH  770413 ..  770425 +  -3.5  -3.81144   GAAATTGTCGTTTTT                TTATT TGC AATAA                TTACTTGTTTTTTAT  54 93
APS55_RS03380  770729 ..  770745 +    -3  -3.88559   AAGGAGTGGAATAGC              CGATGA AAGAA TCATTG              TTTATAAAACTAGTT  54 27
APS55_RS03385 NONE
APS55_RS03390  771728 ..  771747 + -10.8   -5.6473   TAAATAATAAAAAAG            CTTAGAGC AATA GCTCTAAG             TTTTTTTAGTCTTAT 100 34
APS55_RS03400  773153 ..  773177 + -17.2  -4.90869   TCTATTCTAAAAAAA          GGCCCCCGAA TTAAT TTCGGGGGCC          TTTTTGATTAATCGT 100 31
APS55_RS03410  778215 ..  778235 +  -3.2  -5.28683   TAGTAATAAGAAAAA            GGGGCCTA CTTAT TAGGATCC            TTTTTTAATATTCAT  71 38
APS55_RS03415  779282 ..  779303 +  -9.5  -5.24129   TAAATAGTGAAAAAA           GACCGACTT TTCT AAGTTGGTC            TTTTTTGTGCCAACA 100 34
        purE NONE
        purK NONE
APS55_RS03430 NONE
        purS NONE
        purQ NONE
        purL NONE
APS55_RS03450 NONE
APS55_RS03455 NONE
        purN NONE
        purH  789434 ..  789445 +  -2.2  -3.54424   TGCCCTTGTATTTAG                TGGC AACC GTCA                 TTTCAAACACTAGAG  47 1
        purD  790735 ..  790754 + -10.8  -5.14563   TTAGATAGGTAAAAA            GCTATGGT CTAG ACCATAGC             TTTTTTACTGCAAGA 100 33
APS55_RS03475  791418 ..  791441 +  -6.8  -5.63517   TTTGGACAACAAAAA          GGATGATTAA TTAG TTAACCATCC           TTTTTTATTTCAGAA  90 168
APS55_RS03480 NONE
APS55_RS03485  793351 ..  793372 + -13.1   -5.5074   GTACATATATAAAAG           GCACTATCC GTTA GGATAGTGC            TTTTTTATTGCCTTC 100 86
APS55_RS03505  796001 ..  796016 +  -3.9  -5.60993   ATTAAACATCAAAAA              GGGCG GTTAAA CGCTC               TTTTTTTGTGCCAAA  81 40
APS55_RS03510  796493 ..  796512 + -10.8  -5.41941   AAGATGATTAAAAAA            GAGCTAGA TTAA TCTAGCTC             TTTTTGTTTAGTTTA 100 30
APS55_RS03520  798766 ..  798783 +  -9.9  -5.48163   TTCAAAAATAAAAAA             CGTTGCT AGCA AGCAACG              TTTTTTAGTTTGTTT 100 30
APS55_RS03530 NONE
APS55_RS03535  801479 ..  801492 +  -3.1  -5.40072   CTTCTGCAACAACGT               CATCG GGGT TGATG                TTTTTTTGAAGGACA  78 374
APS55_RS03555  804925 ..  804937 +  -6.3  -3.54029   TAAATATTTGTTAAT                TGATG AAA CATCA                TTATAATTAATAGGA  63 38
APS55_RS03560  805229 ..  805246 +  -5.5  -5.70761   AGCATTGACTAAGTA             GGCATCC GATA GGGTGTC              TTTTTCTTTTATTTT  93 25
APS55_RS03565  806360 ..  806377 +  -8.5  -5.84381   AGTAAAAAATAAAAA             GATATCC ATTT GGATATC              TTTTTTTATTGGTAA 100 36
APS55_RS03570  806747 ..  806767 + -12.7  -5.71638   ATATCATGTAAAAAA            GAACCGATA TAA TATCGGTTC            TTTTTTTAGTTATTA 100 30
APS55_RS03580  808090 ..  808127 + -14.3  -4.94487   TATAGGCTTTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 56
APS55_RS03585 NONE
APS55_RS03590  809804 ..  809836 +  -2.7  -3.16336   GTATAGAACCTTGAT      GTATTCACGATCATC ATA GACAATTGGGAATAC      CTTTTCGCTTAAAAT  44 343
APS55_RS03600  811495 ..  811522 +  -7.9  -5.95286   CATTAAAAAATAAAA        GAGAGGAAAAT GTTAAG ATTTTCTTCTC         TTTTTTATTTTTGGT 100 42
        budA  813154 ..  813175 + -13.1   -5.5604   GAATAAAAATAAAAA           GGACTGACA TATT TGTCAGTCC            TTTTTTATTACTTAG 100 35
APS55_RS03615  815268 ..  815287 +  -6.4  -5.56263   TAACAATCAAAAAAA            GACCTGAC AAAC GTCAGATC             TTTTTATTTTATAGT  90 38
APS55_RS03625  816716 ..  816732 +  -2.3   -4.1196   TGCTTTAAAGAATTC              TTAATTC GTC GATTTAA              TTTTAAAAATCAATT  52 22
APS55_RS03630  817528 ..  817547 +  -7.8   -5.8901   TCAACAAATAAAAAA            GCCGACCT GCTT AGGTCGAC             TTTTTTATTTTGTCT 100 30
APS55_RS03640  820107 ..  820129 + -10.6  -4.93877   TAAATAAATCTTAAA           GACCACCAAA TTT TTTGGCGGTC           TTTTATTTGGTCAAA 100 34
APS55_RS03645  822116 ..  822137 +  -7.3  -5.75538   AATAAAAAATAAAAA           TGTCATCCG ATAA TGGGTGACA            TTTTTATTTTTTAAA  95 36
APS55_RS03650  823919 ..  823941 +   -12  -5.16133   AATAAACGATAAAAA           CCACAGGTCC AAT GGGCTTGTGG           TTTTTATATTGTGAT 100 39
APS55_RS03655 NONE
APS55_RS03660 NONE
APS55_RS03665 NONE
APS55_RS03670  826703 ..  826727 + -11.5  -4.90525   AACAAAAAAATAAAT          AAAAAGCAGCC TAT GGCTGCTTTTA          TTTTGTTTGAACTTA 100 24
APS55_RS03675  827594 ..  827634 + -14.4  -3.70742   TTCTAGTATAGTTCA  TAATAAAAACCACAGGTT CGTTA GACTTGTGGTTTTTATTA  TTGTATTAACATTTT 100 35
APS55_RS03680  828462 ..  828472 +  -5.4  -4.31043   ATAGCACCGTTAAAT                 GGTA AAA TACC                 TTTTGAGTATTATAT  67 37
APS55_RS03685  829246 ..  829303 + -17.5  -4.34285   ATTGTTGGTTACTAT TATTATGATTAACAAAAAGCAATGCCTG ATT CAGGCATTGCTTTTTGTTTA-CGTAAAA TTATTTGTTTGGATG 100 14
APS55_RS03700  832115 ..  832156 + -12.7  -2.94637   CTGACGCTTAATAAT CA-CATAAAAAAGCTACCAA TAA TTGGTAGCTTTTTTATTATG CTTTGATATCTGTAT 100 30
APS55_RS03710 NONE
APS55_RS03715  834953 ..  834974 +  -8.8  -5.87996   CGCAAAAATAAAAAA           CGTTGAGA TTAATT TCTCAACG            TTTTTTTATTACTTC 100 50
APS55_RS03740  840514 ..  840532 +  -6.7  -5.95539   AAAGGCTTATGACAA             CAGATCG AAAAG CGGTCTG             TTTTTTTGTTTGCAA  95 41
APS55_RS03745 NONE
APS55_RS03750 NONE
APS55_RS03755 NONE
APS55_RS03760  844028 ..  844052 + -11.6   -5.4505   AGTAATTAGATAAAG          GGGTTGTTAT GAAAA ATAACAACCC          TTTTTTATTGGAAAA 100 32
APS55_RS03765 NONE
APS55_RS03770  846504 ..  846525 + -11.7  -5.65177   ATAAAAAATAAAAAA           GATACGACA TTTT TGTCGTATC            TTTTTTTATACATCT 100 41
APS55_RS03775  847433 ..  847443 +  -2.6  -3.73775   AATAAAGGAAGAGTG                 TAAT GGG ATTA                 TTTAATAAGAGTCCA  50 36
APS55_RS03780 NONE
APS55_RS03785 NONE
APS55_RS03790 NONE
APS55_RS03795 NONE
APS55_RS03800 NONE
APS55_RS03805 NONE
APS55_RS03810  853319 ..  853356 +  -4.3  -2.84999   GATTATATCTTTTTT   CGTATATAGTTTTAATG GCTG CATCAATGCTATATATG    TATAGTGAATTTAAT  47 71
APS55_RS03815 NONE
APS55_RS03820 NONE
APS55_RS03825  857320 ..  857339 +   -10  -5.28942   TCCATAATTAAAAAA            GAGGCCTC CGCA GAGGTCTC             TTTTTATTTAACATC 100 174
APS55_RS03835  860012 ..  860049 + -11.5  -5.72622   TGGTAACACGCGGAA   GCGTCCTTAGATCCATAT TAA GTATGGGT-TAAGGGCGC   TTTTTTATTTATCAA 100 307
APS55_RS03840  861007 ..  861029 + -13.6  -5.64304   AAATAAAAATAGAAA           GAGAATACCT TAA AGGTATTCTC           TTTTTTATTGTGTTA 100 35
APS55_RS03845  867742 ..  867773 + -16.2   -3.8579   CTGCATAGATATTAA      TAAAAGAGAATACC ATTT GGTATTCTCTTTTA       TTTGCCTTGTTAAGT 100 52
APS55_RS03850  872261 ..  872302 + -12.7  -3.61486   TTTAATAAACGTAAG TA-ACGAAAAAAGAATGCCA CTT TGGCATTCTTTTTTTGTGTG TTATGATGTTTTCAT 100 23
APS55_RS03855  873160 ..  873180 +  -6.9  -5.68039   ATATTAATTACAAAA            GCAACGA ATTAATG TCGTTGC            TTTTTTTATACATTT  95 34
APS55_RS03860  874736 ..  874761 +  -9.2  -5.65177   ATTAAATTAGAAAAA         TTCCCTAAAA ATTTCA TTTTAGGGAA          TTTTTTTATAGCTAT 100 49
APS55_RS03865  876390 ..  876434 + -11.7  -5.54907   TGGTTATGCTATTTT CTGGGAGGAAT-TGATCCGGT ATTCA ACCGG-TGACATTCCTCCCAG TTTTTGTTTTATACG 100 83
APS55_RS03915  886870 ..  886887 +    -7  -5.70829   TGGTACTAATAAAAA             GAACCC CAAAGA GGGTTC              TTTTTTTATACTCTT  95 32
APS55_RS03920  887671 ..  887697 + -14.6  -5.46706   ATGTATAAAAAATAA         CGCTAGGTTAGA TAT TCTAACTTAGCG         TTTTTATTTTGCACT 100 33
APS55_RS03930  888807 ..  888853 + -12.1  -4.90918   AACAATCCCAATAAA TAA-AATAAAAAAAGATAGGTC ATAA GACCTATCTTTTTTTATTGTTC TTTTGTTCCTTTTGT 100 42
APS55_RS03940  890950 ..  890970 + -11.2  -5.60993   CTTAATAATTTAAAA            GACACGAC ATTGC GTCGTGTC            TTTTTTTCTAAAACC 100 36
APS55_RS03945 NONE
APS55_RS03950 NONE
APS55_RS03955  893532 ..  893550 +  -4.6  -2.64616   ACACAAGATTTTATT             CGAGTATT ATA GATACTTG             TAATATAAATGAAGG  49 82
APS55_RS03960  893973 ..  893995 + -12.8  -5.40474   ACAATTATGGTAAAA           GACGACTATC CTA GATGGTCGTC           TTTTTTTGAGCAAAT 100 76
APS55_RS03965  894802 ..  894829 +  -9.9  -2.78743   TCAATAAATAAAAAC        GCCCTTGATTC AATTGA GAAACAAGGGC         CCTTTTTATCTTAAT  76 95
APS55_RS03970  896500 ..  896525 +  -7.7  -5.52986   TAATATAGTAAAAAA         GACATGATTAT TTTA ATAATCACGTC          TTTTTTTAATAAAAT  95 38
APS55_RS03975  897552 ..  897574 + -12.8  -5.65177   CGTTAATCAAAAAAA           GAAGCACTCG ATG TGAGTGCTTC           TTTTTTTATACATAT 100 35
APS55_RS04000  904152 ..  904170 + -13.2   -5.1417   AATAAATAATAAAAA             GCCACCTA TTA TAGGTGGC             TTTTTAATTTTATAA 100 39
APS55_RS04005 NONE
APS55_RS04010 NONE
        fabD NONE
APS55_RS04020 NONE
APS55_RS04025 NONE
APS55_RS04030 NONE
APS55_RS04035 NONE
APS55_RS04040 NONE
APS55_RS04045 NONE
        fabI NONE
APS55_RS04055  912940 ..  912952 +  -3.5  -3.18766   GATTAATAAAAGACG                TTTAA TTG TTAAA                ATTTTGAATTATAAG  47 351
        fabZ NONE
        fabF  914691 ..  914711 + -15.5  -5.63504   ATAAAACAACTAAAA            GACGCGGTA TAA TACCGCGTC            TTTTTTTCTGGAATT 100 40
        galE  915796 ..  915807 +    -3  -5.20735   ATATTTAATTATATT                TGAT TATA ATCA                 TTTCTTTTTTCTTGA  71 40
APS55_RS04075  916818 ..  916839 + -10.2  -5.56263   ACTATTTATAAAAAA           GCGTTGTC TTTAAT GACAACGC            TTTTTCTTTTGTCCT 100 51
APS55_RS04080  917824 ..  917850 + -11.7  -4.95758   AAAAAAGATAATGAA         CAACGTGTTGA CTTTC TCAGCACGTTG         TTTTTATAATGTAAT 100 45
APS55_RS04085 NONE
APS55_RS04090  921245 ..  921265 + -14.1  -5.22312   ATAATACGAATGAGA            GACGATGGA TTT TCCATCGTC            TTTTTTAGTATAAAT 100 47
APS55_RS04095  922480 ..  922521 + -13.4  -5.40474   ATGAAAACTTCGGAA GCACTAGAAA-AATGACTG GTAAG CAGTTATTCTTTCTAGTGC TTTTTTTACCGCACT 100 218
APS55_RS04100 NONE
APS55_RS04105  924986 ..  925019 +  -3.9  -5.28983   AAAACTTATCGAAAA     GACTGTTTTTACGTA TTAT TTCGTGGAAATGGTC      TTTTTCTATTTTCAA  73 50
APS55_RS04110  926088 ..  926115 +  -5.6  -5.47431   TTGATATTACACTAA        GAAGCG-GCCTAA TTT TAAGGTTCGCTTC        TTTTTTATGTGTTAA  85 47
APS55_RS04115  927922 ..  927959 + -16.5  -4.94487   AATGAAACATGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACTAAAGGGGTTC    TTTTATGTTTTCTAA 100 39
APS55_RS04120 NONE
APS55_RS04125  929364 ..  929382 +  -5.4  -3.21464   CACTTCTTTTTTATT             TTTCAAAA TGT TTTTGAAG             TTGGGTATTAATGTT  54 71
APS55_RS04135  930425 ..  930465 +   -13  -2.87325   GAACAATTAAATGAA GCTA-AAAAAAGACTTGAT TAGC ATCAAGTCTTTTTTGTGGC  GTTGTTATAACCAGT 100 5
APS55_RS04145  931467 ..  931490 + -10.4  -5.98675   TTCAAGATTAACTAA          CTTCCTATCG TAAT TGATAGGAAG           TTTTTTATTTTTATA 100 26
APS55_RS04155 NONE
APS55_RS04160 NONE
APS55_RS04165 NONE
APS55_RS04170  936266 ..  936291 +  -2.8  -2.82742   TTAAATTTTTGGAGG         TTTTTTTATG AAAGTG TATAAAAAAA          TGGTTGTAGCAGGAT  41 87
APS55_RS04175  938156 ..  938182 +  -9.6  -5.76633   TATCCTCGCAAAAAA         CACCATTATG TGTAATT CATAATGGTG         TTTTTTTATGTCTAA 100 118
APS55_RS04180 NONE
APS55_RS04185  939151 ..  939181 + -17.1  -5.04597   GCTTATGCTGCACTG       CACCCCAAAGTTT GTACA AAACTTTGGGGTG       TTTTTGTGTCTAAAT 100 54
APS55_RS04190 NONE
APS55_RS04195  940728 ..  940738 +  -6.8  -2.78438   CGTCGGCGATGGAAG                 TGCC TTT GGCA                 ATTTCAGATGTGATG  57 191
APS55_RS07815 NONE
APS55_RS04210  943861 ..  943908 +  -6.5  -5.22289   TATAACCTTAGAAAA GCTGTGCAGAT-GGTCATTCGT TATAT ACGAATCACTTATTTGTGCAGC TTTTTGTGTTTAATC  82 144
APS55_RS04215  945577 ..  945610 + -10.5  -5.67967   TTAAAGTCGCTAAAA     GCCACTA-ATGGATAT AAA AAATCCATGTAGTGGC     TTTTTTTGTGATAAT 100 37
APS55_RS04220  946619 ..  946644 + -17.7  -5.69793   CAACCAAAATAAAAA         GCCCCGTAAGA ATTA TCTTACGGGGC          TTTTTTATTTACTAT 100 43
APS55_RS04230  948500 ..  948510 +  -2.6  -2.89564   AAAATAGTTTACTTA                 TTTA ACC TAAA                 TCTATAAAATAGAAA  42 48
APS55_RS04235  949983 ..  950002 +   -10   -5.4505   AAACCTAAATAAAAA            GGCCTGAC GTTT GTCAGGTC             TTTTTTATTACCAAA 100 40
APS55_RS04260 NONE
APS55_RS04265  957080 ..  957098 +  -9.6  -5.52096   TCAAAAACAAACTAA             GTCCTAAC ATT GTTAGGGC             TTTTTTATTGCATTT 100 19
APS55_RS04270  959095 ..  959131 +  -5.4  -3.05816   TATTTAAGATAGTAT   TAAGAAAAGCTGTTATG GAAA CATT-CAGCTTTTTTTA    TTAAATAAAAAATGA  54 29
APS55_RS04275  959686 ..  959704 + -10.3  -5.47159   CTATAAAATACTAAA             GGAGCCT TGATT AGGCTCC             TTTTTATTTATTAAG 100 35
APS55_RS04280 NONE
APS55_RS04285 NONE
APS55_RS04290 NONE
APS55_RS04295  963936 ..  963957 + -13.1  -5.79595   AAAGTAAATAAAAAA           GCCTAAGCA AAAG TGCTTAGGC            TTTTTTGTTTTAGAA 100 34
APS55_RS04310 NONE
        ppcA  968385 ..  968407 + -12.1  -5.56673   ATTCCAAACAAAAAA           GCTAGTGAG ATTTA CTCACTAGC           TTTTTTATTATGCGT 100 40
APS55_RS04325  970529 ..  970542 +  -3.1   -2.9162   ATAAATAAACAGAAA               TCGAG ATGA TTCGA                TGATTTACGGAATTC  44 40
APS55_RS07820  970846 ..  970863 +  -9.9  -5.87996   TTAAAGACTAAAAAA             GACTAGC GTTA GCTAGTC              TTTTTTTATTGCTTA 100 30
        lysA NONE
        dapD NONE
APS55_RS04350 NONE
        dapA NONE
APS55_RS04360 NONE
APS55_RS04365 NONE
APS55_RS04370  980956 ..  980981 + -12.7  -5.70522   AAGGGTAAATAAAAA         GAGTCGCATTC GATT GAATGTGACTC          TTTTTTGTTGTTATT 100 42
APS55_RS04395  985795 ..  985817 +   -15  -5.31545   AATTAATTAAAAAAA           GACTTACGGA TTT TCCGTAAGTC           TTTTTTAGTGTTGTT 100 39
APS55_RS04405  988780 ..  988799 +  -7.1  -5.41359   AAATAATCATGAAAA            GCTACCG GTTATA CGGTGGC             TTTTTTAATTTCCTT  90 35
APS55_RS04410  989928 ..  989939 +    -3  -3.23216   GAGCAACAATACTTA                TGAT AATC ATCA                 TTAATAATGATGAGA  46 200
APS55_RS04425  992933 ..  992963 + -12.8  -3.14307   TGCCTCCAAAAAAAA       TAACCATCATGCAT ATT ATACATGATGGTTA       TCATTTTACATTGAT 100 443
APS55_RS04440 NONE
APS55_RS04445  996731 ..  996774 + -15.6  -3.61517   AGAAAAGGCGATATG TAATAAAAAAAGGAACCCGA TATT TCGGGTTCCTTTTTTGAATA TTATTAAGGAAAAAT 100 23
APS55_RS04450 NONE
APS55_RS04455 NONE
APS55_RS04460  999045 ..  999089 + -11.7  -5.54907   TGGTTATGCTATTTT CTGGGAGGAAT-TGATCCGGT ATTCA ACCGG-TGACATTCCTCCCAG TTTTTGTTTTATACG 100 78
APS55_RS04495 1004693 .. 1004703 +  -2.6  -2.63913   ATAAGAATTTTGTAT                 TTTT TCC AAAA                 TAGTGTAGAATAGTA  40 52
APS55_RS04500 1005379 .. 1005400 +  -9.5  -5.73563   AACGAAAAATAAAAA           GCCTCTGGAT TTA ATCCAG-GGC           TTTTTTTCGTTTAGT 100 29
APS55_RS04510 1007814 .. 1007844 + -17.1  -5.04597   TCGATGAATGCACTG       CACCCCAAAGTTT GTACA AAACTTTGGGGTG       TTTTTGTGTCTAAAT 100 51
APS55_RS04515 NONE
APS55_RS04520 1009527 .. 1009540 +  -6.7  -3.93963   AAGGTGATTGGAAGT               GGCTT GATT AAGCC                TTTGTCCATCATGCT  69 327
APS55_RS04530 1011601 .. 1011621 + -10.4  -5.61689   CTATAAAAATAAAAA            GCGTTGCC AAATC GGCAGCGC            TTTTTTATTAGTTTT 100 35
APS55_RS04545 1013618 .. 1013639 + -13.1   -5.8187   AATAAGCAAAAAAAA           GAAGGCATC GATT GATGCCTTC            TTTTTTTATTGAATA 100 36
APS55_RS04575 1020862 .. 1020888 + -11.7  -5.47218   TTTTAAACCAAAAAA         GGAACCTATCA GAATA TGGTAGGTTCC         TTTTTTTACATAAAG 100 282
APS55_RS04595 NONE
APS55_RS04600 1026305 .. 1026325 +  -9.8   -5.4659   AACAATCTAAAAAAA            GACCTAAC GTAAA GTTAGGTC            TTTTTATTTATATTA 100 31
APS55_RS04620 1030610 .. 1030626 +  -2.3  -4.20084   CCTAATTAAATTAAT              TTTTTCA TTG TGAAGAG              TTTTAGATAGCTACT  54 43
APS55_RS04625 NONE
APS55_RS04630 NONE
APS55_RS04635 NONE
APS55_RS04640 1034686 .. 1034713 + -14.4  -4.77896   AAACAGCTAAAAAAA        TAACCGTTACTT TATT AAGTAACGGTTA         TTTTTACGTTGATTA 100 31
APS55_RS04650 1037864 .. 1037888 + -10.8  -5.43621   TAGTAACAAATAAAA         GCGCCT-ATCC ATAG GGATTAGGCGC          TTTTTTGTCGTTTCT 100 48
APS55_RS04655 1038911 .. 1038925 +  -2.9  -2.90227   CCATTCATTTTTCTA               TGTAT GATAA ATACA               ATTTAATGATTGGAG  42 54
        guaA 1040528 .. 1040548 +  -9.8  -5.88197   TCCTAAATAAAAAGG            GCTCAACA ATTGA TGTTGAGC            TTTTTTTGTATTTAC 100 46
APS55_RS04675 NONE
        adhP 1044857 .. 1044877 + -10.5  -5.37345   TTTTAACTAATTAAA            GCATTGTCT TTT GGACAATGC            TTTTTTATAATTGGA 100 42
APS55_RS04685 1046826 .. 1046846 + -10.5  -5.67063   TTTTAACTAATTAAA            GCATTGTCT TTT GGACAATGC            TTTTTTTGTACTAAA 100 79
APS55_RS04690 NONE
APS55_RS04695 1048668 .. 1048687 + -12.2  -5.82036   ATGAAATCTAAAAAA            GAAGCCGT ATTT ACGGCTTC             TTTTTTATTTGTTGT 100 30
APS55_RS04705 NONE
APS55_RS04710 NONE
APS55_RS04715 1051504 .. 1051534 +  -4.9  -5.60993   CAAGGTGCGTCATGA      TGGGCTTT-ATGAG AGTT TTCATAAAAGTCCA       TTTTTTTGTAAAAAA  85 65
APS55_RS04720 1052183 .. 1052202 +  -9.4  -6.09196   ATGTTAATTGCCTAA            GCTGATTT TTTT AAATCAGC             TTTTTTTGTTTTCAG 100 26
APS55_RS04725 1053190 .. 1053235 + -12.9  -3.18766   GATAAAATAAAAAAA GGCGCTTTTCAAAACGAAAAG TGTC TTTTTTGTTTTGAAAAACGTC CTTTTAAATTATACC 100 43
APS55_RS04735 1054409 .. 1054430 + -10.3  -5.58179   GCTGATTAATTAAAA           GACTGAATT GAAA AATTCAGTC            TTTTTTATTATCATC 100 32
APS55_RS04740 NONE
APS55_RS04745 1055709 .. 1055729 + -14.1  -5.49568   TTGAGAACAAAAAAA            GCAACGAGA TAA TCTCGTTGC            TTTTTATTTTGCGTT 100 14
APS55_RS04760 1057785 .. 1057817 + -13.7  -4.10453   TTCATACCTATAATA      AAAAAGAACTGATGA ATT TCATCAGTTCTTTTA      TTTTGCCCAGATTTC 100 28
APS55_RS04770 1059419 .. 1059446 + -11.4  -5.39221   AAAGAAATTATTATG        GTCTCTTCTTGT ATTT ACAGGAAGGGAC         TTTTTTAGTTATTAT 100 267
APS55_RS04775 1060969 .. 1060988 + -12.2  -5.64421   AAATAATATAATGAA            GATGCCGT TTTA ACGGCATC             TTTTTTGTTTGCCAT 100 35
APS55_RS04780 1061933 .. 1061964 +   -16  -5.27335   GTGGTACCGCGAAAA      GAAGACCTTCGTCC CAAT GGATGGAGGTCTTC       TTTTTATTTGCAAAA 100 240
        serS 1063298 .. 1063319 +  -9.5  -6.12458   ATAGTTGAAACTAAA           GCGATAATC GAAA GATTGTCGC            TTTTTTATTTTTTTG 100 45
APS55_RS04790 1063560 .. 1063574 +  -2.8  -2.82015   ACAAGCAGGAGGTCA               CAGG TTCGAGC CCTG               TATCCTCCATATGAG  41 0
APS55_RS04795 NONE
APS55_RS04800 1063781 .. 1063791 +  -5.4  -2.78018   CCCTTCGCCCGCATT                 TGCA ATT TGCA                 TAATTGCTGCCGACT  52 28
APS55_RS04805 NONE
APS55_RS04810 NONE
APS55_RS04815 NONE
APS55_RS04820 NONE
APS55_RS04825 1064247 .. 1064270 +  -8.3  -5.95286   ATAATATAACCAAAA          GAGAAAACA TTAATT TGTTTTCTC           TTTTTTGTTTTTCGT 100 39
APS55_RS04830 NONE
APS55_RS04835 1067347 .. 1067362 +    -9   -5.9218   AGGCATAATAAAAAA              GAGGGA ATTA TCCCTC               TTTTTTTATTGTCTA 100 33
APS55_RS04840 NONE
        rpoC 1074911 .. 1074936 + -12.7  -5.64274   TTTACAACTCAAAAA         TAGCAATCGCT GAAT AGCGGTTGCTA          TTTTTTTATACATAG 100 41
        rpsL NONE
        rpsG 1076726 .. 1076753 +   -10  -5.00616   TGTACATTTAATTGA        GTGGCTAATGTG TTAT TATATTAGCCAC         TTTTTTACAAAAGAG 100 61
        fusA 1078908 .. 1078933 +  -8.4  -5.96219   GTGTTTCTAAATTAA         GAAGTGTTGA TTAATT TCAACGCTTC          TTTTTTTTGTACATA 100 44
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB 1082115 .. 1082135 +  -3.4  -3.15212   GATGTAATAAACTAA           GT-TATACC TTCG GGTATACAC            TTCCCTATACTGATT  45 34
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
APS55_RS04940 NONE
        rpsH NONE
        rplF 1086931 .. 1086962 +  -6.7  -3.84039   AAGGAAGGTAAGACA      GGTAAGTAATGAG TTAAAT CTCATTGCTTAAC       TATTTTAATTAATAT  69 17
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
APS55_RS04980 1090517 .. 1090533 +  -5.2  -3.31263   TGACAAAATACTTAA              GCAATT CAAGT AATTGC              TTCTGCGGCTAGCAT  56 13
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK NONE
APS55_RS05005 NONE
        rplQ 1093271 .. 1093300 +  -4.5  -2.62668   TGCATCAATGGTTAT       TTTACAATTAGTT GATT AATTAATCGTAAA        CTTAATTAAATAGTA  49 7
APS55_RS05015 NONE
APS55_RS05020 NONE
APS55_RS05025 NONE
        truA 1096723 .. 1096735 +  -6.3  -4.30448   TACAAAACTACCTCA                TCATC AAA GATGA                TTTTAGGTTGACTTT  72 13
        rplM NONE
        rpsI 1097734 .. 1097754 +  -7.6  -5.64274   TTTCTGTTTTCAAAA            GGACTTCC CGTGT GGAAGTTC            TTTTTTTATACATAA  95 53
APS55_RS05045 1098433 .. 1098458 + -16.3  -5.80727   GAATACGAAAAAAAA         GCACTGATGAC TAAT GTCATCAGTGC          TTTTTTATTATTTTT 100 12
APS55_RS05055 NONE
APS55_RS05060 1100114 .. 1100132 + -10.3  -5.68438   AGAAGATTAAAAAGA             GTCGGCA TAATT TGCCGAC             TTTTTTATTTGGTGC 100 31
        pcrA NONE
        ligA NONE
APS55_RS05075 1105642 .. 1105655 +  -5.3  -3.41125   GTGAATGTGTTAAAA               TACTG ATAG CAGTA                TTATCAATATATACA  57 42
        gatC NONE
        gatA NONE
        gatB NONE
APS55_RS05095 1109933 .. 1109945 +  -4.9  -3.53091   TTTAGAAGATTACAA                CAAAA CTT TTTTG                TTTAGAAAAAGGGGT  55 78
        rlmD 1111346 .. 1111362 +    -8  -6.00814   AGGTAAAGGAAAAGA              CACCCT GAGAG AGGGTG              TTTTTTTTGCTTATT 100 39
APS55_RS05105 NONE
APS55_RS05110 NONE
APS55_RS05115 NONE
APS55_RS05120 1119693 .. 1119713 + -11.9  -5.24799   AGATAAATAGAAAAA            GACATCCTG TGA CAGGGTGTC            TTTTTCTATTTATAA 100 31
APS55_RS05125 1120688 .. 1120705 +    -7  -5.47399   GATTAATTAATAATA             GACACC CCTCCA GGTGTC              TTTTTTTGCACTTCC  89 35
APS55_RS05130 1121559 .. 1121580 +  -8.8  -5.72254   ATAGCACTAAAAAAA           GCATTCGA ACTTAA TCGAATGC            TTTTTTATTATTTAC 100 116
APS55_RS05145 NONE
APS55_RS05150 1126946 .. 1126963 +  -8.5  -4.28548   TAATTTACTAAAATG             CGACAAT ATTA ATTGTCG              TTTTAATGACTCCAT  81 53
APS55_RS05155 1127050 .. 1127074 + -10.1  -5.88197   GTGGGGTCATAAAAA          GCACTAACATT TTA AAAGTTAGTGC          TTTTTTTATATTTAC 100 30
        pstS 1128063 .. 1128084 +  -8.1  -5.67967   AAACCAATTGAAAGA           GATCAGTTT AATG AAACTGGTC            TTTTTTTGTACTCAT 100 39
        pstS NONE
        pstC NONE
        pstA NONE
        pstB NONE
        pstB NONE
        phoU NONE
APS55_RS05195 1133900 .. 1133924 + -18.7  -5.34381   ACTACAATAAAAAAA          TCCCGCTTGGA TAT TCCAAGCGGGA          TTTTTGTTTGGATTT 100 31
APS55_RS05205 1136487 .. 1136514 + -15.8  -6.23317   ATAGATACGAAAAAA        GCGATGAGATAA ATTT TTATCTCATCGC         TTTTTTTATTTTTCT 100 46
        wecB NONE
APS55_RS05225 1140084 .. 1140113 +  -9.5   -4.6526   AAGATTGCAAAACAA       AAAAATCGTTGAT AAAC ATCAACGATTTTC        TTTTTAACCATTTAT 100 39
        recX NONE
APS55_RS05240 NONE
        tagD 1143050 .. 1143072 + -12.8  -5.38497   AAGAAATAAAAAAGA           CATCCTCGAT TTA ATCGGGGATG           TTTTTTAATTTACAT 100 32
APS55_RS05250 1144738 .. 1144760 + -13.6  -5.48825   ACTATAAAACAAAAA           GAGCTTAGAT ATT ATCTAAGCTC           TTTTTTTACGTCATC 100 34
APS55_RS05265 NONE
APS55_RS05270 NONE
APS55_RS05275 NONE
APS55_RS05280 NONE
APS55_RS05285 1154395 .. 1154415 + -11.9  -5.63236   AGTTTCAAAACAAAA            GGACGACTT TTA GAGTCGTCC            TTTTTATTTTTAAAT 100 39
APS55_RS05290 1156413 .. 1156424 +    -3  -3.55622   GGCTGGATCACCTCC                TTTC TAAG GAAA                 TTTCGGAAACTTACA  50 23
APS55_RS05295 NONE
APS55_RS05300 1156689 .. 1156704 +  -7.6  -2.92158   CCCGCTATTCTCCAT              TGACAC GTAA GTGTCA               TACTTGGTTCTTTGA  67 25
APS55_RS05305 1159823 .. 1159833 +  -5.4  -3.61356   TATCTAGTTTTGAGA                 GAAC GAA GTTC                 TTTCAGATAAATAGT  59 70
         rrf NONE
APS55_RS05315 NONE
APS55_RS05320 NONE
APS55_RS05325 NONE
APS55_RS05330 NONE
APS55_RS05335 NONE
APS55_RS05340 NONE
APS55_RS05345 1160530 .. 1160544 +  -4.2  -3.04263   GGGACCAGGGGGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATAGAGT  48 1
APS55_RS05350 1160665 .. 1160675 +  -6.8  -3.68886   CCTCTGCCGCGATTA                 GGTC TTG GACC                 TTTAGCTCAGTTGGT  67 28
APS55_RS05355 1160736 .. 1160756 + -10.5  -3.60627   TAGGTTCGAGTCCTA            CAAGGTCCA TAG TGGACTTTG            TTTCACATCACATGG  85 16
APS55_RS05360 1160833 .. 1160849 +  -5.1  -2.80141   TGGGTCAAACCACGC              GAGAGTT CGA ATCTCTC              ATTCTCCTTTATATT  52 1
APS55_RS05365 1160927 .. 1160939 +  -3.3  -3.29031   GGTCGTTGGTTCAAA                TCCGG CTC CCGCA                ATTTTGGTTCGTTGG  47 11
APS55_RS05370 NONE
APS55_RS05375 1161117 .. 1161127 +  -2.6  -3.32521   TAACTAAATATATGT                 TATA CTT TATA                 TTATGCGGGTATAGT  45 41
APS55_RS05380 1161209 .. 1161223 +  -3.5  -2.70525   TTACCCGCTTTTATA               TGGGC CTATA GCTCA               GTTGGTTTAGAGCGC  44 28
APS55_RS05385 NONE
APS55_RS05390 1161350 .. 1161366 +  -5.1     -2.67   TCGGGTTACCGGCGC              GAGAGTT CGA ATCTCTC              CTTCTCCGTTAGTTT  51 1
APS55_RS05395 NONE
APS55_RS05400 1161547 .. 1161559 +  -3.3  -3.29031   GGTCGTTGGTTCAAA                TCCGG CTC CCGCA                ATTTTGGTTCGTTGG  47 11
APS55_RS05405 NONE
APS55_RS05410 NONE
APS55_RS05415 1161880 .. 1161901 +  -8.8  -5.33026   AACGTAGAAAATAAA           GGATTGCA TTAAGT TGCAATCC            TTTTTATTTGACTTC 100 42
APS55_RS05420 NONE
APS55_RS05425 1164746 .. 1164769 +  -6.1  -5.58179   TAAGTAAATAAAAAA          GCAC-TTGGA TAAAT TCCAAAGTGC          TTTTTTATTATGCTC  90 34
APS55_RS05435 NONE
APS55_RS05440 1167212 .. 1167231 + -12.2  -5.24989   TTTGGCTAATAAAAA            GACTGGCA AATA TGCCAGTC             TTTTTTCGTATCTAA 100 32
APS55_RS05445 NONE
        pepF 1170201 .. 1170223 + -12.1  -6.09196   TTTAATAATAAAAAA           GCTTCCAAC TTTTC GTTGGAAGC           TTTTTTTATTTTAGA 100 36
APS55_RS05460 NONE
APS55_RS05465 NONE
APS55_RS05470 1173367 .. 1173392 +  -7.7  -5.31059   CGTCAATTATTCAAG         GCTTCTAATAT ATTG ATATTAGGGGC          TTTTTTAGTTCCTGT  90 18
APS55_RS05475 NONE
APS55_RS05480 NONE
APS55_RS05485 1177246 .. 1177272 + -12.4  -5.61689   TAATGACTAAAAAAA         TGGAACCCATCA TTT TGATAGGTTCCA         TTTTTTATTAGTTTT 100 31
APS55_RS07835 1177873 .. 1177894 + -13.1   -5.8187   ACGCTTTAAAACCTT           GAGCTACCA ACGT TGGTAGCTC            TTTTTTTATTGCCTA 100 32
        mraZ NONE
        rsmH NONE
APS55_RS05500 NONE
APS55_RS05505 NONE
APS55_RS05510 1182946 .. 1182959 +  -2.5  -3.90316   CCGGAGTTTTATCAA               TTATT TTAT AATAA                TATTTTTGGGAGCAT  52 15
APS55_RS05515 NONE
        murG NONE
APS55_RS05525 1186367 .. 1186379 +  -3.4  -3.69069   AATAATGGTTCTTTA                GAGT TGTCT ACTC                TTGTGTTAAAATTAA  50 39
        ftsA NONE
        ftsZ NONE
APS55_RS05540 NONE
APS55_RS05545 NONE
APS55_RS05550 1191143 .. 1191172 + -11.6  -5.75599   TTGGGTGGTACCGCG       GAAGACTTCGTC CCTTGT GATGAAGTCTTC        TTTTTTTATAATTTG 100 196
        ileS 1194008 .. 1194036 + -16.3  -4.56775   TCGAAGAATAATCGA        TAAAAAACTGGGA CTA TCCCAGTTTTTTA        TTTTTAAGGAGAAAT 100 30
APS55_RS05560 NONE
APS55_RS05565 NONE
APS55_RS05570 NONE
APS55_RS05575 NONE
APS55_RS05580 NONE
APS55_RS05585 1197376 .. 1197393 + -11.3  -5.18561   GAAAATAATTAAAAA             GAGGGCT TTAT AGCCCTC              TTTTTTGCATCTTTA 100 33
        mnmA 1198645 .. 1198665 +  -8.4  -5.37043   CATTTAAAACCAAAA            GATGCTTA TTTAT TAAGCATC            TTTTTTATATAAACT  95 34
APS55_RS05595 NONE
APS55_RS05600 NONE
APS55_RS05605 NONE
APS55_RS05610 1203740 .. 1203761 +  -8.7  -6.01187   TTATTTAGATAGGAA           GTTCACCCA TGAT TGGGTGGGC            TTTTTTTGTTTACTT 100 29
APS55_RS05615 1204844 .. 1204867 + -12.5  -5.36441   AATAAATTAAAAAAA          GGAGCAGTC GTAAAA GACTGCTCC           TTTTTTATATGACAA 100 36
        arcD 1206379 .. 1206396 +  -8.5  -5.60864   TACCATATAAAAAAA             GAGTGAT TAAT ATCACTC              TTTTTTTAGTATATA  95 31
APS55_RS05640 1209897 .. 1209917 + -12.7  -5.37865   TAAGGTAAATTAAAA            GACCTAACA AAA TGTTAGGTC            TTTTTTGATTATTCG 100 28
APS55_RS05650 NONE
APS55_RS05655 NONE
APS55_RS05660 1212632 .. 1212649 +  -9.9  -5.61596   TAAGTACGGTTCTGA             CTGTGAC TGAT GTCACAG              TTTTTTTATGCAAAT 100 16
        typA 1214611 .. 1214631 + -14.1  -5.66338   AGCATTTAATTAAAG            GGATGGACA ATT TGTCCATCC            TTTTTTGTTGTCTTT 100 47
APS55_RS05670 NONE
APS55_RS05675 NONE
        rsmD NONE
        coaD NONE
APS55_RS05690 1218334 .. 1218360 + -11.1  -5.24989   AAAAATAAAATAAAA         GGAATGTAATT GAATA AATTACATTCC         TTTTTTCGTATCTAA 100 28
APS55_RS05695 NONE
APS55_RS05700 1219586 .. 1219600 +  -4.4  -3.56042   TCTTATTTACCAAAA               TAAATT AAT AATTTA               TATATTTTTCCATCG  53 23
APS55_RS05705 NONE
        holA 1222845 .. 1222866 + -13.1  -5.03314   TGGATAAACAAAAAA           GGACATCTC AAAC GAGATGTCC            TTTTTTAAGAATAAA 100 34
        rpsO 1223714 .. 1223738 + -11.5  -5.96219   TTAATATTTTTAAAA          TGGAACTGCTC TAT GAGTGGTTCCA          TTTTTTTTATACATA 100 37
APS55_RS05725 NONE
APS55_RS05730 1226499 .. 1226529 +  -5.6  -3.19398   GAAATTATAAAGCGA       CAATTTAATTCAAT TAA ATAGAATAAAATTG       TTAAATATGCTTTTT  57 5
         tuf 1227911 .. 1227932 +  -8.1  -5.64274   TCAATTCTAAAAAAA           GATTCAGAT TTTT ATCTGGATC            TTTTTTTGTACATAA  95 41
APS55_RS05740 1229390 .. 1229418 + -12.6   -5.0538   TTTGTTAATATTAAA        GGTCCAGTTAAC AATTC GTTAATTGGACC        TTTTTTAAACTAAAG 100 49
        clpX 1230743 .. 1230781 + -14.8  -5.49729   AAAGAAGCTCAATAA   TAAAAAGCCTTACAGTGT TTA ACACTGTAGGGCCTTTTG   TTTTTTTAGATAATT 100 26
APS55_RS05750 NONE
APS55_RS05755 1231744 .. 1231792 +  -9.1  -5.63012   AACCGCCTAAATAAA CAATAAAAAATAGGCATCACAAT TTA ATTGTGATGCCTAAATTATATTA TTTTTCTTTCTTTTT 100 20
        uvrC 1233809 .. 1233822 +  -4.5   -3.5764   TTGAAAAATGATGTG               GACTG TTTA CGGTC                TTTAAAAATAAAGTT  57 30
        obgE 1235176 .. 1235193 +  -9.9  -5.74122   GGACTAATAAAAGTA             GATGGGA CTAA TCCCATC              TTTTTTTATGTGCTA 100 34
         rnz NONE
        recJ NONE
APS55_RS05780 1239059 .. 1239075 +    -8  -5.24531   AATACTAAATTTATT              GGATGC TTAGT GCATCC              TTTTTTATGGAGAGT  90 33
APS55_RS05785 1239194 .. 1239248 + -16.3  -3.85165   TTTCATGATCATAAA TG-TAAAATAAAAAGCACCTTACTAT ACAG ATAGTAAGGTGCTTTTTATTTAGGCA TTTCAATTTAAACTA 100 49
APS55_RS05795 1240998 .. 1241017 +  -5.6  -5.44198   TTGAAAAATAAAAGA            GACGCACT TAAC GGTGCGCC             TTTTTGTTATTTCTT  85 30
APS55_RS05800 NONE
APS55_RS05805 1243156 .. 1243176 +  -5.5  -4.17048   GCTCTTGGTTTAGCG            GGGTTTT TAACGAT AAAACCC            TTCTTTTCAAGGCGA  65 467
APS55_RS05815 NONE
APS55_RS05820 1243989 .. 1244010 +  -6.7  -5.87996   AAATAAATAAAAAAA           GACTTAATT CAAA GATTAAGTC            TTTTTTTATTGCTTA  95 35
APS55_RS05830 NONE
APS55_RS05835 NONE
APS55_RS05840 1246973 .. 1246986 +  -3.9  -4.03413   TTTTTGGAGGGCTAT               TAACA TGGC TGTTA                TTTCTATGAAACAAT  57 181
        rpsB 1247724 .. 1247736 +  -3.5  -3.88331   AGTGAAGACAAGTAA                TATTT TTT AAATA                TTGATTTTGTTTGAA  56 26
APS55_RS05850 1248724 .. 1248741 +  -7.7  -5.65177   ATAATTAATGAAAAA             GGATGCG GATA CGTATCC              TTTTTTTATACATAT  95 37
APS55_RS05855 NONE
         frr NONE
APS55_RS05865 1250575 .. 1250596 +  -9.5  -4.69415   AACTTTACAAATGTG           GGATGAGGA TTGT TTCTCATCC            TTTATTTGTATTAAT 100 44
APS55_RS05870 NONE
APS55_RS05875 NONE
        rseP NONE
APS55_RS05885 1255216 .. 1255236 +  -7.6  -5.10497   TTTGAAATAAAAAAG            GGTCAGTT GAAGA GACTGACC            TTTTTTAGCTGACTT  90 31
APS55_RS05890 1259657 .. 1259678 + -10.9  -5.17507   ATATCTGAGAGAAAG           GAGTGAGCA GAAA TGCTCGCTC            TTTTTATTGGATTTT 100 88
        rimP NONE
        nusA NONE
APS55_RS05905 NONE
APS55_RS05910 NONE
        infB NONE
        rbfA 1264546 .. 1264571 + -12.7  -5.35815   ATCGTTAATAAAAAA         GAACCCGTAAC TGAT GTTATGGGTTC          TTTTTGTTTGCTCTG 100 33
        truB NONE
        ribF NONE
        hrcA NONE
        grpE NONE
        dnaK 1270156 .. 1270185 +  -7.9  -4.87803   GATTACTTTAAAAAG       GGTCAAAGTCTGA CTTG TTGGGCTTTGGCC        TTTTATTTCAAAATG  88 44
        dnaJ 1271383 .. 1271400 +  -9.1   -5.4505   CAAGAAATAAATTAA             GGGTCGC TTAT GCGACTC              TTTTTTGTTGCCGAA 100 31
        lepA 1273449 .. 1273474 +  -9.1  -5.54894   TAAAAATTTGTGAAG         GTCTATTCGTC TAGG GATGAATGGAC          TTTTTTTGCTAGATT 100 131
APS55_RS05960 1274866 .. 1274885 +  -3.6  -5.06816   ATTATTAGACTGATA            TACCAAGT TTTT AATTGGTA             TTTTTATTGGAAAAT  70 120
APS55_RS05965 1279967 .. 1279996 + -15.9  -5.52384   TAAGCAAATAAGATT       GAAGCATCAACGG TTTA TCGTTGATGCTTC        TTTTTTTGCTGAAAA 100 30
APS55_RS05970 1281076 .. 1281110 +  -7.2   -5.4433   ATAATAAATCTTAAA     CGCCTAATTTCTGT GTAAACA ACAGATATTTGGCG     TTTTTATTTATGTCT  90 37
APS55_RS05975 1281590 .. 1281615 +  -5.4  -5.25803   GCTAAATTAATCGGG         GGTGTGTCCT ATAAGA GGGATGCACC          TTTTTTGTAAAAGTT  79 44
        prmA NONE
APS55_RS05985 NONE
APS55_RS05990 NONE
APS55_RS05995 1286009 .. 1286024 +  -7.6  -5.26875   AAAACAAATAAAAAA              GAGCTT GTGA AAGCTC               TTTTTTAATTAGGGG  90 30
APS55_RS06000 1287071 .. 1287082 +  -4.4   -3.6512   TTTTTAATTGCCATA                TCCA TTAG TGGA                 TTTAGACGTTGTTTG  55 419
APS55_RS06010 NONE
        aspS 1291027 .. 1291071 + -23.8  -5.13722   ATTATATTGTTTTTC CTAGGCGGAAAGTTTCCGGT ATTGA ACCGGTGACTTTCCGCCTAG TTTTGTTTTAATACG 100 87
APS55_RS06030 NONE
APS55_RS06035 1294637 .. 1294664 +  -2.9  -3.14132   TTAAAGTAAAGGAAG        TGTGATCGACTT GAAGG AAGTC-ATTACA        TTAATCAAAGAGCAA  43 32
APS55_RS06040 NONE
APS55_RS06045 NONE
APS55_RS06050 1297602 .. 1297631 + -13.9  -3.28912   GATATTTTAAATCAA       TAAAAAAAGAGCT GTTA AGCTCTTTTTTTA        TTGGTATGAATCTAA 100 23
APS55_RS06060 1298822 .. 1298843 +    -8  -5.86061   TTTAATTACTAAAAA           CGTTCCTG TTATTT CAGGGACG            TTTTTTTTGCTAAAA 100 36
APS55_RS06065 1299347 .. 1299374 +  -7.1  -4.26202   CTAATTATTTATAAA        GTATGGTTGTG CTGTGC CACAATCATGC         TTTGTTAGTACATAT  77 37
APS55_RS06070 NONE
        ybeY NONE
APS55_RS06080 1301278 .. 1301296 +  -2.4  -3.53012   GGATTATTGGTATAT             GTTCCAAT AAT ATTTGGAC             TTTAACAGCACGGAG  45 2
         era NONE
        recO 1303224 .. 1303261 +    -5  -5.94713   CCGCGAATAATCGTC   CCTATGTAAACTGTAT TTAAGT ATACTTTTTGCATAGG    TTTTTTTTATGCCAT  91 232
        glyQ NONE
APS55_RS06100 1306378 .. 1306400 +  -8.4  -4.42386   GTATTTTTAACAAAA           GTCGCACTAA AAA TCGGTGCGAC           TTTTATCAGTGAAAG  85 94
APS55_RS06105 NONE
        rpoD 1309401 .. 1309420 + -10.8   -5.8901   GAATAATAATTAAAA            CAGATAGC ATTT GCTATCTG             TTTTTTATTTTCTAT 100 35
APS55_RS06115 NONE
APS55_RS06120 1310958 .. 1310969 +    -3  -3.24488   ATCTTCTATAAACAC                TGAT CCAT ATCA                 ATTTATTTAGGGGGA  47 4
        pepT 1312280 .. 1312307 + -11.5   -5.4833   CCTTTTGGTAAAATT        TACCTATGAGA TGGATT TCTCATAGGTA         TTTTTTATTAAGTAG 100 79
        clpB 1314919 .. 1314950 + -11.8   -3.9693   CATTTGAATAAACAA      AAAAAGCTCAAGTT AATT AACTTGAGCTTTTA       TTATTTGACTGAGTG 100 30
        dnaE 1318716 .. 1318732 +  -3.7  -3.96327   AGTTATGCATGATAG              TCATCTT TTA GGGATGA              TTTGTCATACAAAAT  56 116
         pyk 1320545 .. 1320565 + -12.7  -6.22802   ATTTACTCGAAAAGA            GGATGCATT TTA AATGCATCC            TTTTTTTTTATCGAA 100 42
APS55_RS06150 NONE
        xerD NONE
APS55_RS06160 NONE
APS55_RS06165 NONE
        scpB NONE
APS55_RS06175 1324809 .. 1324827 +  -9.6  -5.23316   TGAAAAGAGATAAAA             GGCTTGTT TAA AACGAGCC             TTTTTTGCTATAATC 100 28
APS55_RS06180 NONE
APS55_RS06185 NONE
APS55_RS06190 NONE
APS55_RS06195 NONE
APS55_RS06200 NONE
        rpsA 1330750 .. 1330775 +  -7.7  -5.68023   TATAATCTTTAAAAA         TATCCTTCATT TTTT GGTGAAGGATA          TTTTTTTCATTATGA 100 46
         der 1332212 .. 1332222 +  -2.6  -3.22995   TATCTTGAATAAATG                 TAAT GAC ATTA                 ATTTGTTGTGATTAC  45 120
APS55_RS06215 1332586 .. 1332610 + -16.5  -5.53079   AGTATGCTATAATTA          GGCTAGTCCGT TTT ACGGACTGGCC          TTTTTTATATGTTTT 100 45
APS55_RS06220 1333950 .. 1333994 +    -3  -5.86061   TTAATCGATGATAAA TCCAAATTTAATTGACTTGA TAGTT TTGAGTCACTTAGGTCTGGA TTTTTTTTGATGAAA  90 67
APS55_RS06230 NONE
APS55_RS06235 NONE
APS55_RS06240 NONE
APS55_RS06245 1339460 .. 1339481 +  -5.9    -5.626   AAAATAATAAAGAAA           GGTTATGGA TTAC TACATAACC            TTTTTTTATGGGGTG  88 39
APS55_RS06250 NONE
APS55_RS06255 NONE
APS55_RS06260 1341224 .. 1341245 +  -7.4   -5.1675   TAAACACTAAAGAAA           TGAACCTA TGAATT TAGGTTCA            TTTTTTGGTGACTAA  86 31
        ylqF NONE
APS55_RS06270 1342902 .. 1342920 +  -4.6  -3.46848   TCATCGAAGAAGTTT             TAAACCAG TTT CTGATTTA             TTGTAGTAACTTTTA  55 1
        dprA NONE
        topA 1346008 .. 1346048 +   -10  -3.74693   GCCGTACAAAAATAG TTAATAGCCCCTAA-AGAT ATAA AACTCTTAGGGGCTATTAG  TTTAATAAGATAAGA  86 26
        xerC NONE
APS55_RS06290 1347947 .. 1347963 +  -5.1  -5.58522   TATGTAATAAAAAAA              CACCCTT TTA AAAGGTG              TTTTTGTTTTATCTA  86 44
APS55_RS06305 NONE
APS55_RS06310 NONE
APS55_RS06315 1351244 .. 1351267 +   -11  -5.80364   GGGTGGTACCGCGAA          GCTTCGTCCC TTTT GGGATGAGGC           TTTTTTTGTTGAAAT 100 266
        pheS NONE
APS55_RS06325 NONE
        mltG NONE
         udk NONE
        greA 1357144 .. 1357181 + -14.3  -4.94487   TAGACGAGTTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 66
APS55_RS06345 NONE
APS55_RS06350 1358958 .. 1358982 +  -5.1  -4.96657   TCGTTAGTGTATACT          TTGCCATTTAA TAG TTTAATGGTAA          TTTTGTTATCTTTAT  74 443
APS55_RS06360 1363361 .. 1363382 +  -4.5  -2.76686   GCTTGAAATAATTGC           TGTTAAGTA ATTT TCCTTAACA            ATATTTATATAAACT  50 30
        rpmG 1363642 .. 1363667 +  -6.1  -5.84432   CGTGAAACAAAATAA         GGATTCGGGTT TAAA GGCCCAAATCC          TTTTTTTATATTCTG  95 26
APS55_RS06370 NONE
APS55_RS06375 NONE
APS55_RS06380 NONE
APS55_RS06385 NONE
APS55_RS06390 1366556 .. 1366593 + -14.3  -4.94487   TTGTAAAGTTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 61
APS55_RS06395 NONE
APS55_RS06400 1368024 .. 1368039 +  -6.2  -4.25747   TTAAGTGAGCGGAAC              GTTGTT TACG AACAAC               TCTTTTTCTGTTTTC  72 97
        miaA 1369286 .. 1369300 +  -4.4  -2.63073   GTTGACATATTAAAA               TATAAT GTT ATTATA               ATGTTGTTAGAAGGA  46 66
APS55_RS06410 NONE
        glnA 1371087 .. 1371107 + -10.4  -5.93252   TAACCATTTAAAAAA            GAGTCGGC TTACT GCCGGCTC            TTTTTTATTTTTCAA 100 41
APS55_RS06420 1371704 .. 1371718 +    -5  -3.35438   GATTTAAAAATGATA               TTGACA CCA TGTCGA               TTATCCGATATAATG  56 52
APS55_RS06425 1371845 .. 1371864 +  -9.4   -5.8187   GAATAAATTGTTGAA            GCATATCA CTTA TGATATGC             TTTTTTTCTTGACTA 100 43
        rplU NONE
APS55_RS06435 NONE
        rpmA 1373027 .. 1373045 +    -6   -5.7946   AATAATGTAGAAAAA             GCCTGA TTTATTT TCAGGC             TTTTTTTATTACCAA  93 47
         efp NONE
APS55_RS06450 NONE
        nusB 1374634 .. 1374653 +  -5.7   -5.8187   TGCTTAAGAAAAAAT            GATTCGC GTAAAA GCGAGTC             TTTTTTTATTACATA  93 34
APS55_RS06460 NONE
APS55_RS06465 NONE
APS55_RS06470 NONE
APS55_RS06475 NONE
APS55_RS06480 NONE
        recN NONE
         gmk NONE
APS55_RS06495 1381466 .. 1381485 +  -8.6  -5.56372   AATAAATAAATTAAC            CCTTTGCA GCAA TGCAAGGG             TTTTTATTTTGATTT 100 39
       coaBC NONE
        priA NONE
APS55_RS06510 NONE
        rsmB NONE
APS55_RS06520 NONE
        pknB NONE
        rsgA NONE
APS55_RS06535 NONE
APS55_RS06540 1392375 .. 1392397 + -13.6  -6.01369   GATGCATAGAAAAAA           GAGAACTGAT TAT ATCAGTTCTC           TTTTTTTGTTATTTA 100 32
APS55_RS06550 NONE
APS55_RS06555 1394927 .. 1394942 +    -9   -5.8187   CTGTTGAATAAAATG              TCGGAG GTTT CTCCGA               TTTTTTTATTACATA 100 30
        recG NONE
        plsX NONE
        acpP 1398367 .. 1398390 + -10.4  -4.94147   ACAAATAATTAAAAA          GGCGATTACT CAAT AGTAATCGTC           TTTTGTTGTATTATT 100 33
APS55_RS06575 NONE
         smc NONE
        ftsY NONE
APS55_RS06590 NONE
         ffh 1405782 .. 1405808 +  -6.6  -5.00884   GTAAATAATGGAAAA         GGCATGATTACC CTG GGTAGTTGTGTC         TTTTTTAGGAGGGAT  82 33
APS55_RS06600 NONE
APS55_RS06605 NONE
APS55_RS06610 NONE
        rpsP NONE
APS55_RS06620 1409088 .. 1409121 +  -8.4   -5.0538   TAGTAAGAATAAAAA     CTCTTAAATGAAAC CTTGGT GTTTTGTTTAAGAG      TTTTTTAACATAAAA  93 19
        rimM NONE
        trmD 1410440 .. 1410451 +    -3  -3.34439   GTAATTGTGGTTATG                TTAG TATT CTAA                 TTGACTATTTTTATA  47 55
        rplS 1410918 .. 1410939 + -10.9    -5.626   TATATCTAAAATGAA           GAGTAACGC TTAT GCGTTGCTC            TTTTTTTGTAAAATA 100 50
APS55_RS06645 NONE
        glpK 1414257 .. 1414277 +  -9.8  -4.98255   AAGCAAAAGAAAAAA            GACTTGAG TTAAT CTCAAGTC            TTTTTATAGTTCAAA 100 39
APS55_RS06660 1416527 .. 1416548 +  -6.6   -4.7889   GATTAATAACTAAAA           GAGTTGCA TTGAAT TGCAGCTC            TTTTTAGGTATTTAT  80 35
APS55_RS06665 NONE
APS55_RS06670 1418979 .. 1419002 +    -6  -5.84381   AATCATAAAAAATAA          GGCTTCTACT TAAA AGTAGGGGTC           TTTTTTTATTGGTAA  93 40
APS55_RS06695 NONE
APS55_RS06700 NONE
APS55_RS06705 1427307 .. 1427329 +   -15  -5.17353   AATACAAATAAAAAA           GCACCTAGAA TTT TTCTAGGTGC           TTTTTTCGTAGCTAT 100 42
APS55_RS06720 NONE
        gpsB 1431409 .. 1431437 +  -3.9  -3.19212   AGGACCAAGTAGCAT        CGACAGATATTAA TCG TTAATAACTGGTG        TATGTTCTGAGTAAT  47 13
        rnpB 1431836 .. 1431857 + -10.1   -5.7946   CACCATTCAGGAAAA           GGGTGGAAG TTTT CTTCCTCCC            TTTTTTTATTGAAAA 100 46
APS55_RS06735 NONE
APS55_RS06740 1434173 .. 1434208 +  -2.7   -5.4251   AATTAGTAAAATAAG   TGAAGG-GCCTGT-GTC GCAA GATTATGGGCACCTTCA    TTTTTTGTATCTGGA  72 27
APS55_RS06750 NONE
APS55_RS06755 1436655 .. 1436666 +    -3  -3.30572   TCTAAAGGAGTTTTT                CAAT GCCA ATTG                 TATATATTTTAATTA  47 36
APS55_RS06760 NONE
APS55_RS06765 NONE
        pyrR 1438562 .. 1438585 +  -4.8  -3.01208   ATTGATGAAAAGTAA          CT-CTTAAATA AAA TATTTAAGGAG          ATTGTTGTTATGACC  51 26
APS55_RS06775 NONE
APS55_RS06780 1442177 .. 1442195 + -11.8  -5.40072   GATGACAAATAAAAA             GCATTCCA TTT TGGAATGC             TTTTTTTAACAGACG 100 29
APS55_RS06820 1449395 .. 1449417 +  -7.7  -5.49568   GAGAAAATAAATAAA           GGGATGCAT CTTAT ATGCACCCC           TTTTTATTTTAAGTT  95 27
APS55_RS06830 1451023 .. 1451046 +  -5.2  -5.35721   GTATTAATAAAAAAA          TGTTCCCAGC ATAA GCTAGGAACC           TTTTTATTATTATCT  82 34
        plsY 1460264 .. 1460283 +  -3.5  -5.80364   ATAAACACGAAAAAA            ACACTGC TTAATT GCAGTGC             TTTTTTTATTGCGCT  85 37
APS55_RS07025 NONE
APS55_RS07030 NONE
APS55_RS07035 1490676 .. 1490697 + -12.3  -5.63374   TAGTTAAATAAAAAA           GGCTCCGGA ATTT TCCGGAGTC            TTTTTTTAGTATTCA 100 41
APS55_RS07075 1500422 .. 1500442 + -12.7   -5.1383   ACGTAATATAAAAAA            GACATCGAA TTA TTCGATGTC            TTTTTCTCTGTTCTT 100 30
APS55_RS07105 1508901 .. 1508918 +  -9.9  -5.88197   AAATAACTAAAAAAG             CCATCCT AATT AGGATGG              TTTTTTTCTATTTCA 100 42
        mscL 1511217 .. 1511238 + -10.9  -5.65496   ACAAATAACAACAAA           CCCAGGTAT TTTT ATGCCTGGG            TTTTTCTTTTTGATA 100 33
APS55_RS07120 1511956 .. 1511978 + -13.6   -5.5762   CAGATAATAAAAAAA           TCCCAAATCA TAT TGATTTGGGA           TTTTTTGTATTTAGT 100 34
APS55_RS07130 1514343 .. 1514366 +  -5.3  -5.95539   AGCAAACGAAAAAAA          GACAGAATC ATAATC GATTCCGTC           TTTTTTTATTTGCGA  91 13
APS55_RS07150 1520182 .. 1520203 +  -7.4  -6.01187   GGCAATACAAAAAAA           TTCCAACT AATTAA AGTTGGAA            TTTTTTTCTTTACTT  95 16
APS55_RS07245 1530909 .. 1530946 + -14.3  -4.94487   TGTTGGGGTTGAACT   GAACCCCTTGAGTTGGA GAAA TCTAACCTAAGGGGTTC    TTTTATGTTTTCTAA 100 57
APS55_RS07250 NONE
APS55_RS07255 1532489 .. 1532502 +  -3.9  -2.52946   TTAAAAATCCAGTCG               CTATT TCTA AATAG                GATTTTATGGAAAAA  44 209
APS55_RS07360 1548676 .. 1548702 + -10.2  -5.94214   ACAATAATAAAAAAA         GAACGCTTAGCG ATA TGCTAAACGTTC         TTTTTTTATTGTCTT 100 34
APS55_RS07550 1590306 .. 1590317 +    -3  -2.58767   TACACGGTAAGCTCG                TCAA CATA TTGA                 TGCCTTAATGGTTCA  42 85
        rpsD 1591082 .. 1591103 +  -8.7    -5.626   TGTTGCTCCAAAAAA           GCGCTTTGC ATTT GCAAAACGC            TTTTTTTCTACCCTC 100 55
APS55_RS07560 NONE
APS55_RS07565 1593137 .. 1593147 +  -2.6  -5.63103   AGCAATCGCAATTTT                 TATT CCA AATA                 TTTTTTTCGTTACAA  76 223
APS55_RS07575 1593723 .. 1593744 + -13.1  -5.46657   AAAAATAAACAAAAA           GACCTGGAT TAAT ATCCAGGTC            TTTTTTATTCGACTG 100 33
APS55_RS07915 1609966 .. 1609985 -  -2.8  -3.05715   AATTGGTTGACCTAA            TGAGTTGA TGGT TCTACCCA             CCATTTCTTCTCCAA  43 472
APS55_RS07660 NONE
        atpD NONE
APS55_RS07650 1605948 .. 1605970 - -12.1  -5.64274   TTATGTATAAAAAAA           GGTCTGCAT AAAAA ATGCAGACC           TCTTTCTTAATGTTT 100 32
APS55_RS07910 NONE
        murA NONE
APS55_RS07635 NONE
        yidD 1602903 .. 1602941 -  -9.9  -4.56597   TTGTCCTCCTAAAAA  TAAAAGTAGTCGATTCAA ATAT TTGA-TCGACTACTTTAA   ATTCATAGAACGTCG 100 17
APS55_RS07630 NONE
APS55_RS07625 1601222 .. 1601234 -  -2.7  -3.33583   ACAATAGCCTCATAA                GTATC TTT AATAC                TTCAGCAATATAACG  45 228
APS55_RS07620 NONE
APS55_RS07615 NONE
APS55_RS07610 1598513 .. 1598545 - -13.7  -3.52177   TCTTAAAAAAGTCAA      TAAAAAAAAAGCGTC TCA GACGCTTTTTTATTA      ATAGTTCTTAGCTGG 100 23
APS55_RS07605 NONE
APS55_RS07600 NONE
APS55_RS07595 NONE
APS55_RS07590 1595248 .. 1595270 -  -7.1   -5.7946   TTTCCAACAAAAAAA           GAGATAATC CAAAT GATTACCTC           TTTTTTAATTATTAT  95 37
APS55_RS07585 NONE
APS55_RS07580 1593723 .. 1593744 - -13.1  -5.63012   AAAAATAAACAAAAA           GACCTGGAT TAAT ATCCAGGTC            TTTTTTATTCGACTG 100 30
APS55_RS07545 1587865 .. 1587897 -  -7.3  -5.84432   TATAACAGAAAAAAA     GAAGTAACGTTTGA ATGACA TCAAA-GTTACTTC      TTTATTTTATTTGGT  95 32
APS55_RS07540 NONE
        thiI 1585384 .. 1585407 -  -7.5  -5.34655   CAAGCAAAAAGAAAA          GAGACCATC AATAAG GATGATCTC           TTTTGATAGATTATA  90 36
APS55_RS07530 1584534 .. 1584563 - -15.1  -5.33405   TCCAGTAAATAAAAA       GAGCACTCCATCC AATA GGACGAAGTGCTC        GCGGTACCACCTAAT 100 270
APS55_RS07525 1581808 .. 1581832 - -12.1   -5.0133   CATCCCTTCAAAAAA          GAGCCGGGCCA ATA TCGCCCGACTC          TTTAATTAATCTAAA 100 41
APS55_RS07520 1580413 .. 1580424 -  -4.4  -3.65314   TTTAATTTTTAATAA                CACT CTCT AGTG                 TATACGATTTTGCAA  53 77
APS55_RS07515 1579267 .. 1579303 - -13.9  -2.71681   CAATCCTCCGAACTA    GTAAATAAGCGGGAAGA TAA CCTCCCCGCTTATTTAA    TCTATTTTCTCTTCA 100 27
        mreC NONE
        mreD NONE
APS55_RS07500 1577146 .. 1577163 -    -2  -2.75382   TACCTGATGTAATTA             CAATGG CTTTTC CCATTA              TTCAATACCTCCAAT  40 23
        minD 1576067 .. 1576095 - -19.1  -6.22802   TTTGATAAAAAAAAA        CGTCCTTTTAGCA ATA TGCTAAAAGGACG        TTGAAAACGTGGTGC 100 288
APS55_RS07490 NONE
APS55_RS07485 NONE
APS55_RS07480 NONE
APS55_RS07475 NONE
APS55_RS07470 1571346 .. 1571358 -  -3.5  -3.50532   ATCTAAACTAATTAA                TTTTT AGG AAAAA                TCTTGTTTTTCACTA  50 9
APS55_RS07465 1570383 .. 1570399 - -10.9  -5.76237   CATAGAAATAAAAAA              GGGCTTT AAC AAAGCCC              TCTTTTTTATTTACT 100 32
        pgsA 1569712 .. 1569729 -  -2.1  -3.26444   CTTGTTAACAATAGA             TGTAT-CA ATT TGCATACA             TAATCCGACCTTTCT  44 67
APS55_RS07455 1569244 .. 1569255 -  -4.4  -4.07912   AAGCAAGTAAAAACA                GAAC AAAA GTTC                 GCATTATTTAGAATG  59 29
        recA 1568095 .. 1568118 -    -9  -4.07568   TTTTCTTTTGCAAAA          TAAAAAAGCC TTTC GGCTTCTTTA           TCGTTATTCTTCACC  83 29
         rny 1566340 .. 1566365 - -13.5  -4.52589   TCGTTTTACATAAAA         TAAAAAAGGGC AAAA GCCCTTTTTTA          TTTTGCATATTCGAT 100 23
APS55_RS07440 NONE
        mutS NONE
        mutL NONE
        ruvA NONE
        ruvB 1559208 .. 1559218 -    -4  -3.16088   ATATCTTATCAAAAT                 TATC ATT GATA                 GTCCAGTCCCTAATT  49 35
        yajC 1558798 .. 1558840 - -14.4  -3.07344   TTAGGCCTTAACAGA CAAAAGAGACAACCTTCAGC ACT GCTGAAAACTGTCTCTTTCA ACTTATTATTTTTCT 100 31
APS55_RS07410 NONE
APS55_RS07405 1556137 .. 1556190 -  -4.8  -5.03945   CAATAAGCACAAAAA CACCGTTGCTAGTAAAGACGCTA TATGCGCGG TACCA-CTTTACTTGCAACGATG TTTTTTCGTATACCT  75 211
        alaS 1553450 .. 1553460 -  -2.6  -3.74859   GGAACAAAATAAAAC                 TTAA ATA TTAA                 TTATTTTTAAAAGTT  50 32
APS55_RS07395 NONE
        ruvX NONE
APS55_RS07385 1552316 .. 1552332 -  -6.5  -5.86465   AAGAACACAAAAAAA              GACGCCA TTG CGGCATC              TTTTTGATTATTGTT  95 40
APS55_RS07380 NONE
APS55_RS07375 NONE
APS55_RS07370 NONE
        trxA 1548676 .. 1548702 - -11.7  -5.97979   ACAATAATAAAAAAA         GAACGCTTAGC GATAT GCTAAACGTTC         TTTTTTTATTGTCTT 100 39
        racE NONE
APS55_RS07350 NONE
APS55_RS07345 NONE
APS55_RS07340 1545674 .. 1545706 - -10.7  -5.47821   ACCTATTGAAAAAAA      CAAAAGAGGCCTAAC AAA GTCAGGTCTCTTTTA      CAATTTAAAAATTAT 100 37
        ccpA NONE
APS55_RS07330 1543644 .. 1543675 -  -8.2  -5.96219   TACTCATAAAAAAAA      CCTCCACTTTTT ATATTCGA AAAAAGTAGAGG       TTTCATTTATTTTTA 100 79
        tadA NONE
APS55_RS07320 NONE
APS55_RS07315 NONE
APS55_RS07310 1541040 .. 1541050 -  -2.6  -3.56727   TCGAATCAATCATAA                 TAAA GCC TTTA                 TTCATAATATTCTTC  48 23
APS55_RS07300 1540453 .. 1540473 -  -2.6  -3.60587   ATAAAACCGATAGAA           CGACAATCG CAAT CAAT-GTCG            CTGATCCACATTTTT  48 40
APS55_RS07295 NONE
APS55_RS07290 1537984 .. 1538015 - -11.1  -4.31379   ATCAATCCATGAAAA      TAAAAAAGAGACC TTATTT GGTCTCTTTTTCA       TTATTTTTTAAGACG 100 26
APS55_RS07285 1536384 .. 1536433 -  -3.2  -6.20267   TGAAAAATAAAAAAA CAGCTTCAAGCAAACTAACCACTT AATT AAGTAATTAGT-CG-TTGAACCTG TTTTATTTTTATACG  89 34
APS55_RS07280 NONE
APS55_RS07275 NONE
APS55_RS07270 NONE
APS55_RS07265 NONE
APS55_RS07260 1532249 .. 1532293 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 76
APS55_RS07240 1529166 .. 1529180 -  -5.7  -3.32963   ATTGTTATTTTATAA               GCGAA TTGAC TTCGC               AATGTTTAATTCTTA  59 346
APS55_RS07235 1527477 .. 1527492 -    -9  -2.92158   TCAAAGAACCAAGTA              GAGAGG TAAA CCTCTC               AAAACTGAATAAGAT  72 77
APS55_RS07230 1524348 .. 1524358 -  -5.4  -3.61356   ACTATTTATCTGAAA                 GAAC TTC GTTC                 TCTCAAAACTAGATA  59 70
         rrf NONE
APS55_RS07220 1524140 .. 1524152 -  -4.1  -2.63207   AAGACCAGTTATAAC                TCCGA ATG TCAGA                CTCGAACTGACGACA  46 10
APS55_RS07215 1524043 .. 1524055 -  -3.3  -3.28912   GTATACGGAGAGTAA                GGGAT TCG AACCC                TTGAAACAGGCATTC  47 3
APS55_RS07210 NONE
APS55_RS07205 1523842 .. 1523864 -  -6.3  -3.44186   AACTAGACCAACGAA           CCAGTCCAA TATAT TTGGAATGG           AGGATACAGGGCTCG  63 21
APS55_RS07200 1523751 .. 1523767 -  -9.5   -2.8084   ATAAATATTCAATTA              TGTTGTC AAT GACAACA              ACGGTTCGTACGAGA  74 27
APS55_RS07195 NONE
APS55_RS07190 NONE
APS55_RS07185 NONE
APS55_RS07180 NONE
APS55_RS07175 NONE
APS55_RS07170 1523214 .. 1523224 -  -2.4  -3.18991   ATAATATTAAAATGA                 GGCC AAA GGCG                 GTAATCGGATTTGAA  42 17
APS55_RS07165 1523082 .. 1523101 -  -8.6   -5.9667   AAAAATACAAAAAAA            GACTACCC TTTC GGATAGTC             TTTTTTTAATTAGTA 100 39
APS55_RS07160 1521705 .. 1521736 -  -3.8  -5.50723   CCATCAAAATAAAAA      CGATTTATAAGTAA TTTT CTACAAATAAATCG       TCTTTATCTTTTTAA  81 47
APS55_RS07155 1520182 .. 1520203 -  -7.4  -5.80817   GGCAATACAAAAAAA           TTCCAACT AATTAA AGTTGGAA            TTTTTTTCTTTACTT  95 35
APS55_RS07145 1516802 .. 1516827 -  -9.9  -5.76633   TTAGACACAAAAAAA         GAGTGATAATC GTTA AATTATCACTC          TTTTTCTTTAGTTAG 100 33
APS55_RS07140 NONE
APS55_RS07135 1514329 .. 1514379 - -14.5    -3.794   CCTGAATTCATGAAA GCAAACGAAAAAAAGACAGAATCA TAAT CGATTCCGTCTTTTTTT-ATTTGC GATTTATAAAGTTAA 100 18
        pepV 1511956 .. 1511978 - -13.6   -5.9218   CAGATAATAAAAAAA           TCCCAAATCA TAT TGATTTGGGA           TTTTTTGTATTTAGT 100 36
APS55_RS07110 1508900 .. 1508919 -  -6.4   -5.4148   TAAATAACTAAAAAA            GCCATCCT AATT AGGATGGT             TTTTTTCTATTTCAT  86 32
APS55_RS07100 1506089 .. 1506104 -    -9  -5.54907   TGTATAAAACAAAAA              GACGCT GCCG AGCGTC               TTTTATTTACGAGCT 100 28
        asnB NONE
APS55_RS07090 NONE
APS55_RS07085 NONE
APS55_RS07080 1500422 .. 1500442 - -12.7  -5.48063   ACGTAATATAAAAAA            GACATCGAA TTA TTCGATGTC            TTTTTCTCTGTTCTT 100 14
APS55_RS07070 1498963 .. 1498994 -  -8.2   -5.4505   CTCCTTAATAAAAAA      TAACGCGATATTGAT AAT ATCAAAA-CGCGTTA      TTAATATCAAGGTAT  95 76
APS55_RS07065 NONE
APS55_RS07060 1498377 .. 1498407 - -11.4   -5.1634   ATAAATATATAAAAA       GTCTCTTACAAT ATTAATA ATTGTAAGAGAC       GGAATAACCCGCGGT 100 211
APS55_RS07055 1496621 .. 1496645 -    -8  -5.79595   TGGTAAAATAAAAAA          CAGATTTAAC TAATT GTTAAACCTG          TTTTCTTTAATTACA 100 36
APS55_RS07050 1494397 .. 1494427 - -10.6   -4.8622   TCCTTTAACTAAAAA       CGTCGTATCACT TAATAAC AATGATACGACG       TTTTATATTAATTGG 100 46
APS55_RS07045 NONE
APS55_RS07040 1490676 .. 1490697 - -10.1  -5.65927   TAGTTAAATAAAAAA           GGCTCCGGA ATTT TCCGGAGTC            TTTTTTTAGTATTCA 100 31
APS55_RS07020 NONE
APS55_RS07015 1486775 .. 1486798 -    -9  -5.24129   CCTCCTCATAAAAAA          TAGCCAAAAC CAAG GTTTTGACTA           ATTAAATCTGCCAAA 100 101
        trmB 1485944 .. 1485954 -    -4  -4.89521   ATACTTTAAACAAAA                 GTAA AGT TTAC                 GGTAGCTGGGTTATG  70 173
APS55_RS07005 1485361 .. 1485377 -  -2.3  -2.83345   TCCACATATTAATTA              TTATAGA GAA TCGATAA              ATTCTTCTACTTGTT  40 9
APS55_RS07000 NONE
APS55_RS06995 1482022 .. 1482040 -  -4.6  -3.37464   TCATTAATCTTATAA             TATCAGAT TTG AGCTGATA             TGGCGCCCCTTTTTT  53 39
APS55_RS06990 1480622 .. 1480632 -    -4   -2.8294   GATGTGTTAGAAGTA                 TTCT ACC AGAA                 TCGTAAGAAACTACA  47 46
APS55_RS06985 1479842 .. 1479892 - -12.3   -2.8844   GCATAGTATATTATA TAAAAAATAAAAAAGATGGTGTT GTATA AACACCATCTTTTTTATTATCTG TTATTGTCACCAATT 100 19
        polA NONE
        mutM NONE
APS55_RS06970 1475699 .. 1475710 -    -3  -2.60423   ACCTCAATTAATCTA                TGTT ATTA AACA                 ATTTTACCACTTGAT  42 6
        nrdR NONE
APS55_RS06960 NONE
        dnaI 1472597 .. 1472630 - -12.6   -5.7827   AATAGAAACAAAAAA     GCCCCTAGCATCTA AATAAA TAGATACTAGGGAC      GTTATAAACGTGGTT 100 271
        thrS 1470439 .. 1470464 -  -9.7  -5.47914   AAAAAGCAGAAAAAA         GCGGATACCCA CAAC TGAGCACCCGC          TTTTGGTCCTTTGAA 100 171
        infC 1469861 .. 1469875 -  -2.9  -3.20991   CTTAATTTAACTTAA               GTATT ATAAA AATAC               TATCTAATTTTTATC  43 29
        rpmI 1469622 .. 1469650 -  -2.6  -2.90992   AATCCTCCTAAATTA        TGTCTTACTTAA AAGTA TTAATTAAAACA        TCTTTGTGTATTTGC  42 18
        rplT 1469205 .. 1469234 -  -7.3  -5.97979   ATAATAAGAAAAAAA       CTCCCACCTACTTA CCT TAAGT-GGTGAAAG       TTTTTATATACTATT  95 36
APS55_RS06930 NONE
        yqeH NONE
        yhbY NONE
APS55_RS06915 NONE
        yqeK NONE
        rsfS NONE
APS55_RS06900 NONE
APS55_RS06895 1463690 .. 1463700 -  -5.4  -2.82434   AATTAATAAATTAAT                 GGAA TTT TTCC                 TGCATCTTGAGGAAT  52 2
APS55_RS06890 NONE
        rpmF 1462759 .. 1462787 - -11.7   -5.9218   TACATAACAAAAAAA        GCTACCAGGACCC ATG GTGTTCTGGTAGC        TTTTTATTTAATTAG 100 37
APS55_RS06880 1461852 .. 1461866 -    -5   -2.7263   ATCATGGTTGGAAAT               CATGAT CTC ATCACG               TAACCGGTTCCTCTA  51 10
APS55_RS06875 1460265 .. 1460282 -    -7  -5.66989   TAAACACGAAAAAAA             CACTGC TTAATT GCAGTG              CTTTTTTTATTGCGC  95 41
        parE NONE
        parC 1454981 .. 1455006 -  -6.4   -2.9857   ATAATAACCTATACA         TCATAAAATA ACAATA TATTTTATGA          TAATAATAATAAATT  59 56
APS55_RS06855 NONE
APS55_RS06850 1452950 .. 1452973 -  -9.6  -4.62441   TTTTATATAAAGAAA          GAACACACCC ATTA GGATGTGTCC           TTTAAATACGTCCTA 100 44
APS55_RS06845 1452130 .. 1452144 -  -2.8  -4.74611   GATTATAAAAAATAA               TGCAAA TTA TTAGCA               CAGAAAAACATATTA  62 42
        msrB NONE
        msrA 1451024 .. 1451045 - -10.9  -4.09002   TATTAATAAAAAAAT           GTTCCCAGC ATAA GCTAGGAAC            CTTTTTATTATTATC 100 41
APS55_RS06825 1449395 .. 1449417 -  -9.9  -4.91046   GAGAAAATAAATAAA           GGGATGCAT CTTAT ATGCACCCC           TTTTTATTTTAAGTT 100 29
APS55_RS06815 1446641 .. 1446660 -    -5  -5.64873   TTTAATAATAAAAAA            GAACTAGC ATAA ACTAGTCC             TTCTTGTCAGTATCA  86 19
APS55_RS06810 1445371 .. 1445392 -  -6.5  -4.31412   AAACATTCATCAAAA           GACATCTCC TAGT GGAGCTGCC            ACTCATATAATTATA  72 222
APS55_RS06805 NONE
APS55_RS06800 1444306 .. 1444322 - -10.1  -5.36441   CCTTTATACAAAAAA              GCACCCG AAA CGGATGC              TTTTAGTTATTGATC 100 32
APS55_RS06795 NONE
APS55_RS07960 1443635 .. 1443651 -    -8  -5.31059   ATATGAATTAAAAAA              GCATCC GTATT GGATGC              TCTTAATATATTTAA  90 37
APS55_RS06790 1442828 .. 1442841 -  -3.9  -4.27617   CACACTGCACGAAAA               TGTAT AACT ATACA                TACAAACATTTAAAC  60 69
APS55_RS06785 1442177 .. 1442195 - -11.8  -5.40464   GATGACAAATAAAAA             GCATTCCA TTT TGGAATGC             TTTTTTTAACAGACG 100 54
APS55_RS06745 1434023 .. 1434045 -  -7.8  -5.21709   CTGGATACGAAAAAA           TCCTAGTC GGCAGTG GACTAGGA           TCATCTGGTTTAACA 100 140
        recU NONE
APS55_RS06710 1427307 .. 1427329 -   -15   -5.7827   AATACAAATAAAAAA           GCACCTAGAA TTT TTCTAGGTGC           TTTTTTCGTAGCTAT 100 44
         mvk NONE
        mvaD NONE
APS55_RS06680 NONE
APS55_RS06675 1419085 .. 1419103 -  -7.4  -5.70761   AAAATAAAAGAAAAA             GCAAGCAA AAA CCGCTTGC             TTAAATTAGTAGGGA  95 31
APS55_RS06655 1414257 .. 1414277 -  -9.8  -5.85244   AAGCAAAAGAAAAAA            GACTTGAG TTAAT CTCAAGTC            TTTTTATAGTTCAAA 100 29
APS55_RS06640 1410953 .. 1410982 - -10.2  -4.07568   TCTTTTTTTGTAAAA       TAAAAGGATGAC AATTAA GCCATCCTTTTA        TTTTATAGGTTTTCG  95 28
APS55_RS06545 1392375 .. 1392397 - -13.6  -5.38047   GATGCATAGAAAAAA           GAGAACTGAT TAT ATCAGTTCTC           TTTTTTTGTTATTTA 100 85
APS55_RS07840 1367896 .. 1367940 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 89
APS55_RS06355 1358484 .. 1358528 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 79
APS55_RS06300 NONE
        yidC 1347947 .. 1347963 -  -7.3   -5.8187   TATGTAATAAAAAAA              CACCCTT TTA AAAGGTG              TTTTTGTTTTATCTA  95 34
APS55_RS06225 1333464 .. 1333475 -  -4.4  -4.56314   CCAATACAACGAAAA                GCTA TTCT TAGC                 GACAGCTCGTGAAGC  68 430
APS55_RS06135 1314916 .. 1314953 - -12.3  -4.20749   TAACATTTGAATAAA   CAAAAAAAGCTCAAGTT AATT AACTTGAGCTTTTATTA    TTTGACTGAGTGTTT 100 23
APS55_RS06055 1297598 .. 1297635 - -14.5  -3.64599   GGATGATATTTTAAA   TCAATAAAAAAAGAGCT GTTA AGCTCTTTTTTTATTGG    TATGAATCTAAATCA 100 19
APS55_RS06025 NONE
APS55_RS06020 1290872 .. 1290883 -  -5.8  -3.85389   CCCTAAGAATTCAAA                GGCT ACTG AGCC                 AATGACTAACGCTCC  64 169
APS55_RS06005 1286446 .. 1286469 - -10.4   -5.4756   AATGGTAACAAAAAA          TCAGGCTTTC AAGA GAAAACCTGA           TCCAGAAGCTGTTAA 100 230
APS55_RS05825 1243989 .. 1244010 -    -6  -6.11392   AAATAAATAAAAAAA           GACTTAAT TCAAAG ATTAAGTC            TTTTTTTATTGCTTA  93 38
        lexA 1242701 .. 1242727 -  -6.1  -2.54459   AATATCACTATGAAG        GTGA-AGTATTT TAAA AAATACTGTCAC         GGTATAATCCAACAA  57 9
APS55_RS05790 1239207 .. 1239234 - -15.8  -5.49568   AATGTAAAATAAAAA        GCACCTTACTAT ACAG ATAGTAAGGTGC         TTTTTATTTAGGCAT 100 47
APS55_RS07970 1231754 .. 1231782 - -17.7  -5.74288   ATAAACAATAAAAAA        TAGGCATCACAAT TTA ATTGTGATGCCTA        AATTATATTATTTTT 100 33
APS55_RS05715 1222845 .. 1222866 - -13.1  -5.72622   TGGATAAACAAAAAA           GGACATCTC AAAC GAGATGTCC            TTTTTTAAGAATAAA 100 68
APS55_RS05645 1209892 .. 1209922 - -12.8  -2.92938   TTAAATAAGGTAAAT       TAAAAGACCTAACA AAA TGTTAGGTCTTTTT       TGATTATTCGATGAA 100 29
APS55_RS05635 NONE
APS55_RS05630 1207337 .. 1207368 - -11.9  -4.65895   CTTTCTATGTAAAAA      TAAAAACGAATTC AATTAA GAATTCGTTTTTA       ATAAGCATCAATTTG 100 44
APS55_RS05625 1206379 .. 1206396 -  -8.5  -5.74122   TACCATATAAAAAAA             GAGTGAT TAAT ATCACTC              TTTTTTTAGTATATA 100 31
APS55_RS07830 1177246 .. 1177272 - -14.6  -5.58074   TAATGACTAAAAAAA         TGGAACCCATCA TTT TGATAGGTTCCA         TTTTTTATTAGTTTT 100 33
APS55_RS05455 1170201 .. 1170223 - -12.1  -5.64873   TTTAATAATAAAAAA           GCTTCCAAC TTTTC GTTGGAAGC           TTTTTTTATTTTAGA 100 31
APS55_RS05430 1164746 .. 1164769 -  -6.1  -5.72053   TAAGTAAATAAAAAA          GCAC-TTGGA TAAAT TCCAAAGTGC          TTTTTTATTATGCTC  95 33
APS55_RS05260 1145838 .. 1145880 - -12.3  -5.69473   GATAGTACAAAAAAA GTTAAAAAAACAGCTAAGA ATAAG TCTTAGCTGTTTTTATATC TGTTCAATTATTTTG 100 33
APS55_RS05255 1144738 .. 1144760 - -13.6  -5.56263   ACTATAAAACAAAAA           GAGCTTAGAT ATT ATCTAAGCTC           TTTTTTTACGTCATC 100 14
APS55_RS05230 1140089 .. 1140108 -  -9.4  -6.09196   TGCAAAACAAAAAAA            TCGTTGAT AAAC ATCAACGA             TTTTCTTTTTAACCA 100 34
APS55_RS05215 NONE
APS55_RS05210 1136487 .. 1136514 - -15.8  -5.25893   ATAGATACGAAAAAA        GCGATGAGATAA ATTT TTATCTCATCGC         TTTTTTTATTTTTCT 100 31
APS55_RS05200 1133900 .. 1133924 - -18.7  -5.89921   ACTACAATAAAAAAA          TCCCGCTTGGA TAT TCCAAGCGGGA          TTTTTGTTTGGATTT 100 43
        gntK 1122954 .. 1122980 -  -2.9  -5.47159   TTTTAATATAAAAAA        GGAAGGG-GTCT AAAT AGACACCCAACC         TTTTTCGTAAATAAT  72 49
APS55_RS05135 1121559 .. 1121580 -  -8.8  -5.56568   ATAGCACTAAAAAAA           GCATTCGA ACTTAA TCGAATGC            TTTTTTATTATTTAC 100 33
APS55_RS05050 1098433 .. 1098458 - -16.3  -5.94597   GAATACGAAAAAAAA         GCACTGATGAC TAAT GTCATCAGTGC          TTTTTTATTATTTTT 100 33
APS55_RS04850 1074911 .. 1074936 - -10.5  -4.78149   TTTACAACTCAAAAA         TAGCAATCGCT GAAT AGCGGTTGCTA          TTTTTTTATACATAG 100 23
APS55_RS04765 1057790 .. 1057812 - -13.6  -5.56673   ACCTATAATAAAAAA           GAACTGATGA ATT TCATCAGTTC           TTTTATTTTGCCCAG 100 28
APS55_RS04755 NONE
APS55_RS04750 1055709 .. 1055729 - -14.1  -5.88565   TTGAGAACAAAAAAA            GCAACGAGA TAA TCTCGTTGC            TTTTTATTTTGCGTT 100 41
APS55_RS04730 1053190 .. 1053235 -   -10  -6.14618   GATAAAATAAAAAAA GGCGCTTTTCAAAACGAAAA GTGTCT TTTTTGTTTTGAAAAACGTC CTTTTAAATTATACC 100 34
APS55_RS04700 1048668 .. 1048687 - -12.2  -5.22943   ATGAAATCTAAAAAA            GAAGCCGT ATTT ACGGCTTC             TTTTTTATTTGTTGT 100 30
        proB NONE
APS55_RS04665 1040528 .. 1040548 -  -9.8  -2.84684   TCCTAAATAAAAAGG            GCTCAACA ATTGA TGTTGAGC            TTTTTTTGTATTTAC  76 37
APS55_RS04645 1034686 .. 1034713 - -14.4  -5.54264   AAACAGCTAAAAAAA        TAACCGTTACTT TATT AAGTAACGGTTA         TTTTTACGTTGATTA 100 38
        hflX NONE
APS55_RS04610 NONE
APS55_RS04605 1026305 .. 1026325 -  -9.8  -5.57054   AACAATCTAAAAAAA            GACCTAAC GTAAA GTTAGGTC            TTTTTATTTATATTA 100 33
APS55_RS04590 NONE
APS55_RS04585 1021772 .. 1021784 -  -7.7  -5.86465   AATAATATAAAAAAA                GACCT AGT AGGTC                TTTTTTGACTTTGAG 100 56
APS55_RS04580 1020862 .. 1020888 -  -9.5  -5.37593   TTTTAAACCAAAAAA         GGAACCTATCA GAATA TGGTAGGTTCC         TTTTTTTACATAAAG 100 31
APS55_RS04570 1018420 .. 1018431 -    -3   -3.7941   TATTGGGCATAATAA                TAAC GTTT GTTA                 GCACTTAAAAATAAT  52 74
APS55_RS04565 1016648 .. 1016665 -  -9.9  -5.72622   CGGACAAATAAAAAA             GAACACC AAAT GGTGTTC              TTATGCTTTATTTGT 100 33
APS55_RS04560 NONE
APS55_RS04555 NONE
APS55_RS04550 1013618 .. 1013639 - -13.1  -6.00814   AATAAGCAAAAAAAA           GAAGGCATC GATT GATGCCTTC            TTTTTTTATTGAATA 100 31
APS55_RS04540 NONE
APS55_RS04535 1011601 .. 1011621 -  -8.9  -5.69262   CTATAAAAATAAAAA            GCGTTGCCA AAT CGGCAGCGC            TTTTTTATTAGTTTT 100 33
APS55_RS04525 1009181 .. 1009225 - -23.8  -5.13722   CGTATTAAAACAAAA CTAGGCGGAAAGTCACCGGT TCAAT ACCGGAAACTTTCCGCCTAG GAAAAACAATATAAT 100 83
APS55_RS04505 1005379 .. 1005400 -  -9.5  -5.67529   AACGAAAAATAAAAA           GCCTCTGGAT TTA ATCCAG-GGC           TTTTTTTCGTTTAGT 100 36
APS55_RS04490 NONE
APS55_RS04485 NONE
APS55_RS04480 1000718 .. 1000729 -    -3  -2.75415   GAAGAAAAATAAAGT                CTAA AAAA TTAG                 GATAATTTGGATAGC  43 14
APS55_RS04475 1000392 .. 1000429 - -14.3  -4.94487   TTAGAAAACATAAAA   GAACCCCTTAGGTTAGA TTTC TCCAACTCAAGGGGTTC    AGTTCAACCCGATAT 100 59
APS55_RS04470 NONE
APS55_RS04465  998801 ..  998815 -  -2.9  -3.52906   GCATTGTCAGAAACA               GTTAT TTTTG ATAAC               AGCTGGACAGTAGTG  47 243
APS55_RS04435  992933 ..  992963 -   -15  -5.75342   TGCCTCCAAAAAAAA       TAACCATCATGCAT ATT ATACATGATGGTTA       TCATTTTACATTGAT 100 40
APS55_RS04430  992520 ..  992537 -  -5.5  -5.69793   AGAGTAAATAAAAAA             GTCGCTT GTAA AAGCGGC              TTTTTTTAATGGCGA  93 31
APS55_RS04420  990517 ..  990539 -  -4.9  -5.02502   CATATCAGATAAAAA           GTGAAATCA TTTTT TGGTTTCAC           TTTTTGTTTGTGTTT  75 22
APS55_RS04415  989637 ..  989661 -  -4.3  -5.52986   ATGGCATTAAAAAAA          CGTCTGGAA GAACAAT TCCCAAACG          TTAACGTATTAGTTC  84 92
APS55_RS04400  985795 ..  985817 -   -15  -5.66868   AATTAATTAAAAAAA           GACTTACGGA TTT TCCGTAAGTC           TTTTTTAGTGTTGTT 100 30
APS55_RS04390 NONE
        mmuM  981960 ..  981971 -    -3  -3.42124   CAAAACTACGCATAA                TAAG TCTC CTTA                 AATTTACTAGACTTT  48 87
APS55_RS04380 NONE
APS55_RS04375  980956 ..  980981 - -10.5  -5.29846   AAGGGTAAATAAAAA         GAGTCGCATTC GATT GAATGTGACTC          TTTTTTGTTGTTATT 100 36
APS55_RS04335  971849 ..  971861 -  -4.1  -3.41745   TTGTCATAATATTAA                TCCTC CTT GAAGA                ATTGGTTGTAGATGC  52 9
APS55_RS04330  970846 ..  970863 -  -9.9  -5.32699   TTAAAGACTAAAAAA             GACTAGC GTTA GCTAGTC              TTTTTTTATTGCTTA 100 31
APS55_RS04320  968385 ..  968407 - -12.1  -5.64421   ATTCCAAACAAAAAA           GCTAGTGAG ATTTA CTCACTAGC           TTTTTTATTATGCGT 100 33
APS55_RS04305 NONE
APS55_RS04300  963925 ..  963968 - -14.2  -2.82862   ATTAACTATTTAAAG TAAATAAAAAAGCCTAAGCA AAAG TGCTTAGGCTTTTTTGTTTT AGAATTCGTTCATTA 100 24
APS55_RS04255 NONE
APS55_RS04250 NONE
APS55_RS04245  951986 ..  952010 -  -7.3  -5.39721   TTAGTATATAAAAAA          GCTATTCTA AAGTTAA TAGAATAGC          TTTTCTTTATTGTTA  90 38
APS55_RS04240  949983 ..  950002 -  -7.8  -5.34381   AAACCTAAATAAAAA            GGCCTGAC GTTT GTCAGGTC             TTTTTTATTACCAAA  95 33
         map  946619 ..  946644 - -17.7  -5.54338   CAACCAAAATAAAAA         GCCCCGTAAGA ATTA TCTTACGGGGC          TTTTTTATTTACTAT 100 37
        thiD  940518 ..  940562 - -23.8  -5.13722   CGTATTAAAACAAAA CTAGGCGGAAAGTCACCGGT TCAAT ACCGGAAACTTTCCGCCTAG GAAAAACAATATAAT 100 81
APS55_RS04150  931516 ..  931538 - -17.8  -5.60689   TTATACAATAAAAAA           GCACCCGAGA AAA TCTCGGGTGC           TTTTGATCTCTTTTT 100 69
APS55_RS04140  930435 ..  930454 -  -9.4  -5.54192   ATGAAGCTAAAAAAA            GACTTGAT TAGC ATCAAGTC             TTTTTTGTGGCGTTG 100 109
APS55_RS04130  929262 ..  929306 -  -8.1  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGAATCA-ATTCCTCCCAG AAAATTGCATAACCA  95 78
APS55_RS03995  901553 ..  901579 - -15.4   -5.5762   ACGAAACACAAAAAA         GCGTTATTAACA TTA TGTTAATAACGC         TTTTAGGTTAGACGA 100 33
APS55_RS03990 NONE
APS55_RS03985  899440 ..  899467 - -10.6  -5.09225   AGTTTATGCAAAAAA        GCCACCCAGAAA TGAT TATCTGAGTGGC         TTTTTTTATAACTTT 100 31
APS55_RS03980  897552 ..  897574 - -12.1  -5.63103   CGTTAATCAAAAAAA           GAAGCACTC GATGT GAGTGCTTC           TTTTTTTATACATAT 100 31
APS55_RS07810  888807 ..  888852 - -13.7  -4.22591   AACAATCCCAATAAA TAAAATAAAAAAAGATAGGTC ATAA GACCTATCTTTTTTTATTGTT CTTTTGTTCCTTTTG 100 18
APS55_RS03925  887668 ..  887700 - -10.7  -5.28176   TCTATGTATAAAAAA      TAACGCTAGGTTAGA TAT TCTAACTTAGCGTTT      TTATTTTGCACTGAA 100 26
APS55_RS03910 NONE
APS55_RS03905  884352 ..  884375 -    -6  -5.80364   ATTCCAATAAAAAAA          GCGACTAAAC AATA ATTAAGTCGC           TTTTTTCTACTATAT  93 43
APS55_RS03900  883400 ..  883429 - -10.8  -4.64334   AATTGGTCAACAAAA       TAGGCACTGTGA TTTTAC TCACGGTGCCTA        TTTGAGTGCAATATA 100 50
APS55_RS03895  882580 ..  882607 -   -12  -5.95539   GGGGAAACAAAAAAA        CGCCTCTGACAC TTAT GTGTCAGGGACG         TTAGTATTAACGTGG 100 269
APS55_RS03890  880891 ..  880921 -  -9.1  -5.11063   ATTATGTAATAAAAA       CCCTAGTACTACA TTATC TATTGTACTAGGG       TTTTTATAAAAATGC 100 268
APS55_RS03885  879427 ..  879457 - -11.3  -4.43012   ATTTTAACATGAAAA       TAGCCACCCTT GAATAGCAA AAGGGTGGCTA       AATTAGTTTTAATAT 100 44
APS55_RS03880  877737 ..  877774 - -14.3  -4.94487   TTAGAAAACATAAAA   GAACCCCTTAGGTTAGA TTTC TCCAACTCAAGGGGTTC    AGTTCAGACTCAAAC 100 66
APS55_RS03875 NONE
APS55_RS03870  876240 ..  876251 -  -4.4  -2.85847   AAGGTTGATACTAGA                TTCC TAAA GGAA                 TACTACATCAGACTT  48 152
APS55_RS03830  857320 ..  857339 -  -7.8  -5.32944   TCCATAATTAAAAAA            GAGGCCTC CGCA GAGGTCTC             TTTTTATTTAACATC  90 29
        brnQ  838207 ..  838229 -  -9.2   -5.7946   TGGCCAATAAAAAAA           GAGTTGAACA TTT CGCTCAACTC           TGATTGTTTGTTTAA 100 44
APS55_RS03730  837206 ..  837236 - -19.2  -5.59655   TAAAGCAATAAAAAA       GCACCCTTAGTTCA TAT TGAACCAAGGGTGC       TTTGTGCACGGTACC 100 306
        brnQ  835687 ..  835707 -  -3.2  -3.60309   CACCACAAATAAAAC            GGCTACCC CCAGT GGATAGTC            TTTAAGTTTTTATTA  50 38
APS55_RS03720  834953 ..  834974 -  -8.8  -5.93252   CGCAAAAATAAAAAA           CGTTGAGA TTAATT TCTCAACG            TTTTTTTATTACTTC 100 34
APS55_RS03705  832115 ..  832156 - -14.9  -2.77895   CTGACGCTTAATAAT CAC-ATAAAAAAGCTACCAA TAA TTGGTAGCTTTTTTATTATG CTTTGATATCTGTAT 100 21
APS55_RS03690  829264 ..  829286 - -16.4  -5.15167   TATGATTAACAAAAA           GCAATGCCTG ATT CAGGCATTGC           TTTTTGTTTACGTAA 100 43
APS55_RS03635  817517 ..  817558 - -15.5  -3.26204   AATCAAAGTTATCAA CAAATAAAAAAGCCGACCT GCTT AGGTCGACTTTTTTATTTT  GTCTAGAAGTGGTGA 100 28
APS55_RS03620  815268 ..  815287 -  -8.6  -5.71638   TAACAATCAAAAAAA            GACCTGAC AAAC GTCAGATC             TTTTTATTTTATAGT 100 34
APS55_RS03610  813154 ..  813175 - -13.1  -5.74684   GAATAAAAATAAAAA           GGACTGACA TATT TGTCAGTCC            TTTTTTATTACTTAG 100 33
APS55_RS03595  809430 ..  809474 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 76
APS55_RS03575  806747 ..  806767 - -12.7  -5.11613   ATATCATGTAAAAAA            GAACCGATA TAA TATCGGTTC            TTTTTTTAGTTATTA 100 31
APS55_RS03550 NONE
APS55_RS03545  802230 ..  802249 - -10.8  -5.32882   TATTAGGATAAAAAA            GCTCACAA ATAT TTGTGAGC             TTTTTGTTTATCTCC 100 49
APS55_RS03540  801074 ..  801118 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 78
APS55_RS03525  798766 ..  798783 -  -9.9  -5.93252   TTCAAAAATAAAAAA             CGTTGCT AGCA AGCAACG              TTTTTTAGTTTGTTT 100 30
        alsS  796493 ..  796512 - -10.8   -5.2112   AAGATGATTAAAAAA            GAGCTAGA TTAA TCTAGCTC             TTTTTGTTTAGTTTA 100 33
APS55_RS03500  794739 ..  794758 - -10.8   -5.5074   TAATGCAACAAAAAA            GCTTCCAA TTTT TTGGAAGC             TTTCAAAACGTTATT 100 36
APS55_RS03495 NONE
APS55_RS03490  793350 ..  793373 -  -9.6  -4.65446   AGTACATATATAAAA          GGCACTATCC GTTA GGATAGTGCT           TTTTTATTGCCTTCA 100 13
APS55_RS03405  773153 ..  773177 - -17.2  -5.44119   TCTATTCTAAAAAAA          GGCCCCCGAA TTAAT TTCGGGGGCC          TTTTTGATTAATCGT 100 40
APS55_RS03395  771727 ..  771748 -  -7.3  -5.72254   TTAAATAATAAAAAA           GCTTAGAGC AATA GCTCTAAGT            TTTTTTAGTCTTATC  95 20
APS55_RS03365  766783 ..  766810 - -14.2  -4.86773   CAAAAGTACGAAAAA        CGCCGCCATGAC AACA ATCATAGCGGCG         CATTTTTTATCAATT 100 39
APS55_RS03360  766185 ..  766222 - -16.5  -4.94487   TTAGAAAACATAAAA   GAACCCCTTTAGTTAGA TTTC TCCAACTCAAGGGGTTC    AGTTCAAGCTTAGCG 100 63
APS55_RS03355 NONE
APS55_RS03350  764558 ..  764577 -  -2.2  -4.41548   CGATATTTTAGAAAA            CAAT-CCGT ACT ACGACATTG            ATGGTAGTCATCGTT  59 274
APS55_RS03340 NONE
        thrB NONE
APS55_RS03330 NONE
APS55_RS03325 NONE
APS55_RS03320 NONE
APS55_RS03315  759855 ..  759899 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 92
APS55_RS03290 NONE
APS55_RS03285  756025 ..  756077 -  -7.3  -5.27335   GCCTCCAAATAAAAA TATACCAAATTATGTTATATAACAA ATA TAGTTATATATCTAAATTTGGCATA TGTCAAGAATGATGT  86 44
APS55_RS03280 NONE
APS55_RS03275  754546 ..  754570 - -15.9  -5.33785   AATTAGTATAAAAAA          GCAGCTAAGAA TAT TTCTTAGCTGC          TTTTTTAATTATTTT 100 34
APS55_RS03250  749506 ..  749518 -  -6.3  -4.31692   AAGCCACCAGTAAAA                TGTTG ATA CAACA                GCGTTTTTTATCGGT  72 52
APS55_RS03245 NONE
APS55_RS03240  748997 ..  749008 -  -2.2  -2.71364   TTATCTTTTTAATGA                GTAG TGTT CCAC                 TCAACTGCTCTAACT  39 27
APS55_RS03235  748717 ..  748740 - -15.4  -5.40464   TAGCATAAAGAAAAA          GGCGATAGTC AAAT GACTATCGCC           TTTTTTGAATCTGGA 100 175
APS55_RS03225  745510 ..  745532 -   -15  -5.21709   CGGGATACTAAAAAA           CACGCTATGA ATT TCATAGCGTG           TTTTTTGTTAGGGGG 100 56
APS55_RS03210  743658 ..  743673 -  -7.5  -5.23316   TATGATAGTAAAAAA              CGCCC CGAAAC GGGCG               TTGAAACTCTATTTT  86 34
APS55_RS03205  742699 ..  742735 - -11.2  -4.33808   CAAATTAATCTAAAA    TAGGTATGTTTTATAA AAAAA TTAAAAAACATACCTA    TTTAATGACTATTTT 100 34
APS55_RS03200  741860 ..  741870 -  -2.6  -3.54129   GATACGTTTTTTAAA                 TTAA TCA TTAA                 CGTACTCCTTTCTAG  46 37
APS55_RS03195 NONE
APS55_RS03190  740257 ..  740274 -  -9.9  -5.59655   TAAACCAATAAAAAA             GCACTCA ATAG TGAGTGC              TTTTTTCGTATCTAT 100 48
APS55_RS03185 NONE
APS55_RS03180  738429 ..  738462 -  -4.5  -3.90318   GCAGTAGTGCAGAAA     GCTCAGCCCAAAGCA GTAG TGCTCAAAGCTCAGC      CCAAAGTAGCAGTGC  59 362
APS55_RS03160  729066 ..  729113 - -12.2  -2.83163   GATTATTAATACAAT TTAGCGCACAAAAAAAGACGCC CTTC GGCGTCTTTTTTTATACACACA TCATCTAAAAGAGAG 100 42
APS55_RS03145  725711 ..  725735 - -10.8  -5.29445   TCTGAATAATAAAAA          GAGACCGTTT GGTAG AAACGGCCTC          TTTTTTATTTAGTGT 100 30
APS55_RS03135 NONE
APS55_RS03130  720981 ..  721002 - -12.3  -5.68039   AAATGCACAAAAAAA           GAACCCCGC ATAA GCGAGGTTC            TTTAAGACTAGACTT 100 33
APS55_RS03125 NONE
APS55_RS03120  719059 ..  719081 - -12.1  -5.54338   GAAGTAAAACAAAAA           GCCTAACGT TTAAC ACGTTAGGC           TTTTTTTATTTGTTA 100 38
APS55_RS03110  717614 ..  717633 - -12.2  -5.28481   TATGTAATTAAAAAA            GACTAGGC ATTT GCCTAGTC             TTTTTATTATGCGTG 100 32
APS55_RS03105  716667 ..  716686 - -12.2  -5.28481   TATGTAATTAAAAAA            GACTAGGC ATTT GCCTAGTC             TTTTATATTAAAATT 100 147
APS55_RS03095 NONE
APS55_RS03090  712782 ..  712809 - -13.6  -5.66868   AATTAAGTAAAAAAA        TAACCCTGAACA TATT CGTTCAGGGTTA         TTTTTATTTGCTTAT 100 37
APS55_RS03075  704239 ..  704256 -  -9.9   -5.9362   GAAAATATAAAAAAA             CTCCAAC CGAA GTTGGAG              TTTTTGTTTGGATTA 100 89
APS55_RS07950  703974 ..  704006 - -11.6  -4.57304   ATTTAAGCAAATAAA     CA-AAAAACACTCCT AAAA AGGAGTGTTTTTCTG      ATCTATCTAATAAAG 100 28
APS55_RS03065 NONE
APS55_RS03060  701639 ..  701661 -  -9.2  -5.34381   AAATCTAAACAAAAA           GAGTTAACCA TTT TGGTTAGCTC           TTTTTTTAGTGGTTA 100 31
APS55_RS03035  696474 ..  696506 - -10.1  -5.67063   TTTATGATAAAAAAA     CTCCAATGTT-GGA GTAAAA TCCGAACATTGGAG      TTAAAATCGATTAGA 100 36
APS55_RS03030  694995 ..  695014 - -12.2  -5.50925   AATGAATATAAAAAA            GAGACCTC CGCA GAGGTCTC             TTTTTATTTGTCTTA 100 41
APS55_RS03020  693517 ..  693555 - -11.3  -4.19258   ATATGTTATTTAAAA  CATA-TAAGCCATAAAGC AAAA GCTTTATGGCTTTTTATG   TCTTATCTATTAGTT 100 28
APS55_RS03005  691554 ..  691589 - -10.6  -5.19261   AAAGGTACGAAAAAA    CGGCGCATAACGTTGAT ATA AT-AACGTTTTACGCCG    TGCAAATTTTTTTAT 100 85
APS55_RS03000 NONE
APS55_RS02995  689931 ..  689954 -   -11   -5.9218   TATAGAATAAAAAAA          GCACCCAAGC ATAA GCTTGTGTGC           TTTTTATGATCGAAA 100 45
APS55_RS02960  682683 ..  682700 -  -6.3  -5.67063   TTGAGCACAAAAAAA             GTGCCTA AATT TAGACAC              AATGTATAATTTTTT  95 43
APS55_RS02945  681218 ..  681262 - -23.8  -5.13722   CGTATTAAAACAAAA CTAGGCGGAAAGTCACCGGT TCAAT ACCGGAAACTTTCCGCCTAG GAAAAACAATATAAT 100 191
        pyrF NONE
APS55_RS02920  676052 ..  676068 -  -8.7   -6.0458   ATAAACTAAAAAAAA              TCCCACA TTT CGTGGGA              TTTTTTGTTTACATC 100 34
APS55_RS02910  673447 ..  673484 - -14.3  -4.94487   TTAGAAAACATAAAA   GAACCCCTTAGGTTAGA TTTC TCCAACTCAAGGGGTTC    AGTTCAACCTAGAAA 100 61
APS55_RS02905 NONE
APS55_RS02900  671954 ..  671987 -  -4.7  -3.77206   TATAATGTCATTAAA     TGGGGGTTACA-GAAA AAA TTTCATGTAACACCTA     TGATAGTATCTCACA  59 126
APS55_RS02895  671432 ..  671452 - -15.5  -5.63236   ATTGAAAAATAAAAA            GAGCGCCTA TAT TAGGCGCTC            TTATTTGTTTTCTTA 100 38
APS55_RS02880 NONE
APS55_RS02875  665873 ..  665898 - -14.1   -5.4505   CGGGTGAATAAAAAA         TCCCGCAGTCT ATGT AGACTACGGGA          CGAAATCTTCGTGTT 100 260
        metE NONE
        metF  662623 ..  662648 - -14.9  -4.65895   CTGCGTATCTAAAAA         GAGAGTGAACA AATA TGTTCACTCTC          TTTTTTATTGGTTGT 100 30
APS55_RS02815  651143 ..  651163 - -12.7  -5.86976   TTACAAAATAAAAAA            GCGTTGAAT TTA ATTCAACGC            TTTTTTTGTTGGTTA 100 42
        dnaA  641375 ..  641387 -  -4.9  -4.27316   TCGTTTAATTGAAAA                TTTCA TTT TGAAA                GTCTCCTCGCATTTA  64 185
        dnaN  640190 ..  640217 -    -7  -5.72207   CGTAAATTAAAAAAA        CGCGACCC TTTATTAGACGG GGGTCGCG         TTTTATTAGATGAAT  95 52
APS55_RS02755  638987 ..  639010 - -11.1  -4.50298   TAAACGCAAAAAGAA          CCCCTTAGA TAACTT TCTAAGGGG           TCTTATTTTATAAAT 100 33
        yaaA NONE
        recF NONE
        gyrB  635480 ..  635495 -  -6.2  -4.34402   GTCGTTACATTAAAA              TGTTTC ACAT GAAACA               TCCATATTAAATGTC  72 32
        gyrA  632857 ..  632893 -  -5.4  -5.59534   AACCACAATAAAAAA   GCTTTCATCATAGGA TTTTTACG TCCTA-AATGAAAGC    TTTTTTTGAAGATTA  86 38
APS55_RS02730  631437 ..  631451 -  -4.4  -3.36581   TAAAGTTTTAATTAA               TAATTT ATT AAATTA               TTAGACTGCTAGTTC  50 68
APS55_RS02725  630227 ..  630277 -  -6.3  -5.48063   ATTCAATACAAAAAA CGGGATTGTTTTTCTGCGATACAT TTAT ATATA-CGCAAAGAAACTTTCCCG TTATTTTTAAAAGTT  86 32
APS55_RS02720 NONE
         ssb NONE
APS55_RS02710  628963 ..  628989 - -13.9  -5.88197   TTAAATATAAAAAAA         CTGGGATTGAT AAAAA ATCAATCCCAG         TCAAAAGTTATTTTT 100 39
APS55_RS02705 NONE
        rplI NONE
        dnaB  624839 ..  624858 - -10.8  -5.61596   ATTTTGACAAAAAAA            TCCTTAGC AAAC GCTAAGGA             TTTAGTTTTAATTAA 100 37
APS55_RS02690  623603 ..  623626 -  -9.6   -5.4756   AATTCTAATAAAAAA          GGTTCGCTAT AAAA ATGGCGAACC           TATTATTCTGAATAT 100 28
APS55_RS02685 NONE
APS55_RS02680  620260 ..  620277 -    -7  -5.32944   TGGAGAACTAAAAAA             GAACCC TCAAAT GGGTTC              TTTTTATTGTTATTT  84 35
APS55_RS02675 NONE
APS55_RS02670  617924 ..  617940 - -10.9  -5.63517   CTGTCAAATAAAAAA              GAGCTCA TAA TGAGCTC              TTTTTTATTACTCTA 100 38
APS55_RS02665 NONE
APS55_RS02660  616858 ..  616874 -  -9.5  -5.35354   TATATAACTAAAAAA              GAACTCA AAA TGAGTTC              TTTTTTATATCTTCT 100 30
APS55_RS02605  605018 ..  605033 - -10.4  -5.67063   TTTACCATAAAAAAA              GTCGGC TCAA GCCGAC               ATTAGTTTTTATACT 100 27
APS55_RS08005  603385 ..  603429 - -23.8  -5.13722   CGTATTAAAACAAAA CTAGGCGGAAAGTCACCGGT TCAAT ACCGGAAACTTTCCGCCTAG GAAAAACAATATAAT 100 93
APS55_RS02580  599906 ..  599926 -  -9.8   -5.8187   TATTTAATAAAAAAA            CATCCTGA TTATT TCAGGATG            TTTTTTCTATAGAAT 100 32
APS55_RS02575 NONE
APS55_RS02570  595661 ..  595680 - -12.2  -4.93318   CATAACTGATAAAAA            GACATCGC TTAA GCGATGTC             TTTTTTTGTGTATTT 100 165
APS55_RS02560 NONE
        walK NONE
APS55_RS02550 NONE
APS55_RS02545 NONE
APS55_RS02540 NONE
APS55_RS02535  588320 ..  588345 -  -8.4  -4.31329   TTAAAAACGCTAAAA         CGCTGACAATG TCCAG CAT-GTCAGCG         TTTTCATAACTTTAA  81 63
APS55_RS02530  587339 ..  587368 - -12.3  -5.77632   AAAAGGATAAAAAAA       GCACCTACCGTTA TAAA TAACAATAGGTGC        TAAAATTTCATCTTT 100 39
APS55_RS02525  586400 ..  586434 - -12.4  -2.74563   CTCACATTTTAAGCA     CAAAAAAAGAGCGAAA TTT TTTCGCTCTTTTTATA     GAAAGTGGATATGAT 100 21
APS55_RS02505 NONE
APS55_RS02500  578594 ..  578616 -   -15  -5.24129   TGGTTTTATAAAAAA           GACCCAAGAT ATT ATCTTGGGTC           TTTTTTCGGAGTGAG 100 57
APS55_RS02480  573789 ..  573808 -   -10  -4.87592   TTATACATAATAAAA            GCCATAGC ATAA GCTACGGC             TTTTTTCATATCCAA 100 50
APS55_RS02475  572164 ..  572182 - -11.8   -5.9218   TATATAATAAAAAAA             CGTTGGAA TAA TTCCAACG             TTTCTTATATTTATT 100 39
APS55_RS02470 NONE
APS55_RS02465 NONE
        pgmB  567428 ..  567447 - -12.2  -5.38047   CATTCATATAAAAAA            GGACTGAC AAAC GTCAGTCC             TTTTTATTTTTATAG 100 35
APS55_RS02455  566355 ..  566374 - -12.2  -5.27477   AGGTTAATCAAAAAA            GGACTGAC AAAC GTCAGTCC             TTTTTATTTTGCAGC 100 19
APS55_RS02420  561267 ..  561288 - -11.7  -5.52986   ATTGCATTAAAAAAA           GACGTTCAT TATG ATGAACGTC            TTTTTTGTTTGGTTT 100 43
APS55_RS02400  556972 ..  556987 -    -9  -2.92158   TCAAAGAACCAAGTA              GAGAGG TAAA CCTCTC               AAAACTGAATAAGAT  72 77
APS55_RS02395  553843 ..  553853 -  -5.4  -3.61356   ACTATTTATCTGAAA                 GAAC TTC GTTC                 TCTCAAAACTAGATA  59 70
         rrf  553681 ..  553700 -  -8.6  -5.66684   GAATGTACAAAAAAA            GAGCTACC AAAC GGTAACTC             TTTTATAAATTGCGC 100 37
APS55_RS02385  552098 ..  552121 -   -14  -5.82281   AAAGATATAAAAAAA          GACCTAATCC AAAT GGATTAGGTC           TTTTAATTTTGTTTA 100 38
APS55_RS07880 NONE
        argJ NONE
        argB NONE
APS55_RS02355 NONE
        argF  542186 ..  542229 -   -15  -2.84325   TTGTGTTAAACACGA GTAAA-AAAAAGACCGGATCA AAT TGATTCGGTCTTTTTATTTAC GCTTTTGAAATAAAC 100 22
APS55_RS02330  535367 ..  535393 - -12.4  -5.40464   TACGATAAATAAAAA         GGATTCGTTTCA TAT CGAAACGAACCC         TTTTTTATTTTGATT 100 39
APS55_RS07790  528525 ..  528549 - -15.7  -4.64676   TCATGGCTAAGAAAA          TCCCCTCGGCA ATC TGCCGGGGGGA          TTTTTTTCGTTTATC 100 36
APS55_RS02285 NONE
APS55_RS02280  522724 ..  522755 -  -3.2  -4.03234   TTTTTCTCATATAAA      GATATAAAGAAATT AAAA AATTAATTTATATC       TTATACACCTCCTCT  54 140
APS55_RS02275  521288 ..  521310 -  -7.8  -5.82281   AAAGATATAAAAAAA           GACGATTC TTTTTTC GAATCGTC           TTTTTGATCAAAGTT 100 42
APS55_RS02270 NONE
APS55_RS02265  520183 ..  520197 -  -7.1  -5.82281   AAATACACAAAAAAA               GAGCC TCAAT GGCTC               TTTTTTAAATTAGTT  95 35
APS55_RS02260  519322 ..  519345 -   -14  -5.74684   CAATAAAAATAAAAA          GAACTGCCAA AAAC TTGGCAGTTC           TTTTTGATAGATATT 100 39
APS55_RS02255  518938 ..  518957 - -12.2  -5.24989   GGATATATTAAAAAA            GCATACGC TTCG GCGTATGC             TTTTTTATTTGATAT 100 30
APS55_RS02245  516780 ..  516797 -  -9.9  -5.64421   ACGCCAAATAAAAAA             GCACACA TTAA TGTGTGC              TTTTTTCCAATCATT 100 39
APS55_RS02235 NONE
APS55_RS02230  514941 ..  514987 -  -9.5  -4.33653   GATTTAAAAATTAAA GAAGCCTTTCTTACACGAGAT GGGAA AGCTCGATAAAGAAAGGCTTC ATAAAGAATTATAAT  89 132
APS55_RS02225  514499 ..  514511 -  -3.5  -2.75333   ATATATAATTATAAT                TTTAT CAT ATAAA                TATTTATACTATAAG  45 50
APS55_RS02220  512691 ..  512711 - -12.7  -4.98531   TTCTTAAATGAAAAA            GAATGGACA TTA TGTCCATTC            TTTCTATTTCCAAAT 100 29
APS55_RS02215 NONE
APS55_RS02210  509937 ..  509974 - -14.3  -4.94487   TTAGAAAACATAAAA   GAACCCCTTAGGTTAGA TTTC TCCAACTCAAGGGGTTC    AGTTCAGGGTGTCTT 100 43
APS55_RS02205 NONE
APS55_RS02200  508532 ..  508552 -  -6.8  -5.08169   AGACATTCTAAAAAA            GACACCCA TTGGT TGGGTGAC            CTGAACCCCTAAAAT  83 51
APS55_RS02190  507229 ..  507248 -  -9.3  -5.35721   ACACAATAATAAAAA            GCTCTCC ATGTTA GGAGAGC             TTTTTTTGTTGTCTT 100 16
APS55_RS02180  506386 ..  506407 -  -7.3  -5.18357   CAATGTACTAAAAAA           GAATGGCTA GAAT TAGCCGTTC            TTTTTGTTTACCTTT  86 16
APS55_RS02165  504402 ..  504422 - -12.7  -5.67283   AAGGCAAACAAAAAA            GAACGACTA TAA TAGTCGTTC            TTTTATTATGCTTGT 100 31
APS55_RS07870  492088 ..  492107 -  -7.8   -5.8096   CATAAAAAATAAAAA            GGCTGCTC GTTT GAGCAGTC             TTTTTGTTTACCTAA 100 58
APS55_RS02145  491524 ..  491553 - -16.7   -3.6018   GAAGACATTAGATAA       TAAAAAAGACGCC GATT GGCGTCTTTTTTA        TTTGTCTTCTCCGTC 100 23
APS55_RS02125  486645 ..  486670 -  -9.8  -5.98675   TACAAAAACAAAAAA         GGCAACTAGA AATTAA TCTAGCTGCC          TTTTAATTTTACATA 100 34
APS55_RS02120 NONE
APS55_RS02115 NONE
APS55_RS02110 NONE
APS55_RS02105  484415 ..  484436 -  -8.7  -5.27709   TTACAAAAAAATAAA           GACTGACTC AATC GAGTCGGTC            TAATTCTTTAAATAT 100 33
APS55_RS02100  483081 ..  483110 - -16.7  -5.02476   AGACTTTGTAAAAAA       TGGGGTAGATTTA TACA TAAATCTACCCCA        TTTAATCTATTAAAA 100 55
APS55_RS02095  477364 ..  477384 -  -9.8  -5.44119   TTTATGTCAAAAAAA            GAAGACTC ATAGA GAGTCTTC            TTTTTTCATTATTAT 100 37
APS55_RS02085 NONE
APS55_RS02080  475386 ..  475399 -  -3.9  -2.77355   GTCAAATAATAAGAC               TCAAA AACA TTTGA                TTTAATCGCTTGCAT  45 168
APS55_RS02075  474246 ..  474263 -  -7.7  -5.66684   GAAGGTATAAAAAAA             GACCGAC ATCA GTCGATC              CTTTAAATATTAATC 100 35
APS55_RS02070  472551 ..  472570 -   -10  -5.35815   CACATTAAATAAAAA            GACGCCAC ATAT GTGACGTC             TTTTTGCTTAGTCTT 100 33
APS55_RS02060  471534 ..  471548 -  -2.1  -2.79671   ACTTTAACTCCAAAT               GGCAT AACAA ATACC               TCACTTAATTTTTTG  40 26
APS55_RS02055  470674 ..  470695 -  -8.7  -5.34555   TTAGAGCATAAAAAA           GGAACCGGC TATC ACCGATTCC            TTTTTATTATTCTTT 100 32
APS55_RS02050  470011 ..  470049 -  -9.9  -5.16237   AACGGTATTAAAAAA  GATAAATAAAGACCTGAC GTTT GTCAGGTCTTT-TTTATT   TAAAGTTCAATTTCT 100 21
APS55_RS02040 NONE
APS55_RS02035  468010 ..  468043 -  -9.7  -4.44284   AATCGAATACTAAAA     TAAAGAAGGCCTGAC AAAT GTCAGGTCTTTTTTA      TTTATTTCTTTGCAC 100 23
APS55_RS02015  464903 ..  464922 - -10.8  -5.41746   AATTGGTGAAAAAAA            GACACCTT GTTT AAGGTGTC             TTTTAAAAATTAACT 100 28
APS55_RS07940  463595 ..  463615 -  -6.9  -5.75478   AAGTATATAAAAAAA            GAATCATCA TTT CGATGATCC            TTTTTGATTTTGACT  95 39
APS55_RS02005 NONE
APS55_RS02000 NONE
APS55_RS01995  462288 ..  462308 - -11.2  -5.70522   AATAAGAATAAAAAA            TAACCGGC GGCAT GCCGGTTA            TCAATCCATATTAGT 100 81
APS55_RS01990  458246 ..  458281 - -14.2   -3.6707   GTTAATAAAAACATA    CAAAAAAGACGCTATC GTAT GATAGCGTCTTTTCAG     ATTACTTAGTTAACT 100 27
APS55_RS01985 NONE
APS55_RS01980  457327 ..  457347 -  -9.7  -5.52909   TAATATGTAAAAAAA            CAGCAGGCA TTT CGCCTACTG            CTTTTATTTATTTTC 100 29
APS55_RS01975  456363 ..  456379 -  -7.3   -4.0342   TTTAATGAAGAAGAA              GCTGCTA AGG TAGCAAC              CATCATTGTGGATGT  72 425
APS55_RS01955 NONE
APS55_RS01950  450623 ..  450642 -  -6.5  -5.67283   AATCTAAACAAAAAA            CATCCTA TAAACG TAGGATG             CTTTTTTATTATTCA  95 34
APS55_RS01945  449667 ..  449685 -  -8.2  -2.67392   TAGACGAAAAGAGAC             TTGCCAAA GAA TCTGGCAA             CAAGAAGGTCAACAT  65 276
APS55_RS01935 NONE
APS55_RS01930  448356 ..  448366 -  -2.6  -3.14211   ACTCCTTGCGATTAA                 TTTT CTA AAAA                 TCAGTATAACAGATT  43 62
APS55_RS01925  447426 ..  447446 - -10.5   -4.8143   TTAATAATGGAAAAA            TCATCGGAC TAC GTCCGATAA            TTTTAATTACAATGA 100 195
APS55_RS01920  444915 ..  444938 -   -14  -5.30616   TTATGTAAACAAAAA          GAACCGTATC AAAA GATACGGTTC           TTTTCTTTATGAATT 100 71
APS55_RS01910 NONE
APS55_RS01905  442781 ..  442808 - -17.2  -5.63517   TGGTTAAATAAAAAA        GAGCGTAACTTC AAAT GAAGTTACGCTC         TTTTTCGCATCTACT 100 215
APS55_RS01895  440354 ..  440373 - -10.8  -5.28315   ATAAAATGTAAAAAA            CTCCAGAA TATT TTCTGGAG             TTTTTTTCGTAATTA 100 47
APS55_RS01885  438816 ..  438840 - -10.8  -4.86773   TAAAATTACGAAAAA          GGCGCTAGAT TCAAC ATCTAACGCC          TTTAATATTATTTAA 100 33
         rny  437032 ..  437060 -  -6.1  -5.69473   CAGACCATAAAAAAA        GAGTTCCAAAA TTTCATG TTTTGGGACTC        TTTTTGGTTTAACAA  95 49
         spx  434788 ..  434809 -  -9.5   -5.8187   GAGTGAATAAAAAAA           CGACATTAC AAAT GTAATGCCG            TCACTCTAAAATATT 100 39
APS55_RS01865  433921 ..  433945 - -11.6   -4.9445   ACAAGTAAGCAAAAA          GGACTTAAAC CTCTC GTTTAAGTCC          TTTTTTATTTAGTCT 100 34
APS55_RS01850  430849 ..  430871 -  -9.2  -5.76949   GACGGTCAAAAAAAA           TAGCACCCCT TCA AAGGATGCTA           AGAAAAAATAGTTTT 100 42
APS55_RS01835  427415 ..  427436 -  -5.9  -5.84381   GCACTAATAAAAAAA           GTTAGACAA CATT CTGCCTAAC            TTAACTCAGTATTGT  93 21
APS55_RS01830  426667 ..  426689 - -10.7  -5.61824   TAAAATCCAAAAAAA           GACGATTAC TAAAT GTAATCGTC           TTTTTTTATCTTCTT 100 41
APS55_RS01820 NONE
APS55_RS01815  424775 ..  424786 -    -3  -3.65832   AAATTTTTGAAAATA                TAGT TTTA ACTA                 TTAAATTTTATTATT  50 36
APS55_RS01810 NONE
        trxA  423368 ..  423394 - -15.3  -5.60993   CTTTCCATAAAAAAA         GTCCCTGTTGT ATAAA ACAACAGGGAC         GACTTATTTGTATTT 100 288
        nhaC  421787 ..  421810 -  -5.4  -3.97026   TCGCAAACAAAAAAC          CTACCACAAA TCGC TTTATGATAG           TCTTTTTAACTTTTT  63 72
APS55_RS01795  420835 ..  420861 - -12.4  -5.77853   AATGGCTAAAAAAAA         GGCGTTGAAAGT AAA ACTTTCAACGTC         TCTTTTTAATACCAG 100 31
APS55_RS01790  419758 ..  419775 -  -8.4  -6.02919   TCACAAACAAAAAAA             GACGCC AATAAA GGCGTC              TTTTTGTAGATATAA 100 69
APS55_RS01785 NONE
APS55_RS01780 NONE
APS55_RS01775 NONE
        carB NONE
APS55_RS01765  411308 ..  411336 -  -8.4  -3.61764   TTACCAATTCTTAAA       TAAAAAAGACTGG ATTT CCAG-CTTTTTTA        TTTAGTCTTCAATTA  74 27
APS55_RS01760  410530 ..  410551 - -13.1  -4.66609   GATTGTATGTAAAAA           GACCAACTC ATCC GAGTTGGTC            TTTTTTTACTTAAAG 100 31
        purB  406686 ..  406706 -  -5.4  -5.75478   AATTACACAAAAAAA            GAGCTGAC GGATT GCCAACTC            TTTTTGTTTTACATT  91 34
APS55_RS01740  406060 ..  406080 -  -9.1  -5.89921   ATTATAATAAAAAAA            GAATAACCT TAC AGGCTATTC            CTTTTACTTAATAGT 100 29
APS55_RS01735  405300 ..  405344 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 87
APS55_RS01710  379091 ..  379117 -   -16  -5.52096   AAAGCCAACAAAAAA         GACCACTCATCA TTG TGATGAGTGGCC         TTTTTATCTATTTAA 100 57
APS55_RS01705  365092 ..  365117 - -10.5  -5.38958   AGTTATAAATAAAAA         GAGCCACTGAA ATTA TCCAGTAGCTC          TTTTTATTAGCAATT 100 39
APS55_RS01700  339882 ..  339904 -   -15  -5.88565   TTTATAATAAAAAAA           GACCTAGCAA AAA TTGCTAGGTC           TTTTTTTGACTATCT 100 35
APS55_RS01695  322627 ..  322654 - -17.2   -5.4588   TAAAAGTATAAAAAA        TACCCGTTAGGA TTTT TCCTAACGGGTA         TTTTTAAAATATCTA 100 38
APS55_RS01690  313093 ..  313116 - -15.4  -5.67283   AAGTCAAACAAAAAA          GCCCCTATCT TAAA AGATAGGGGC           TTTTTTATTATTCTT 100 33
APS55_RS01675  309496 ..  309528 - -11.5  -4.36729   ACCAACAATTTAAAA      GAAAAGACCCAAGAT AAT ATCTTGAGTCTTTTT      TAGTTTTTATCAATA 100 41
APS55_RS01660  305639 ..  305659 -  -7.5  -5.56673   ATCCATAATAAAAAA            GCAGCCACA TTA CGTGGTTGC            TTTTTTGATTAATCG  90 34
APS55_RS01655  304846 ..  304874 - -11.9  -5.80003   TGAACAAATAAAAAA        TGCATGCAGACAA TTT TTATCTACATGCA        TTTTTTAGTGCATAA 100 30
APS55_RS01645 NONE
APS55_RS01640 NONE
APS55_RS01635  303153 ..  303177 - -12.2  -5.48213   TACCTAAAATAAAAA          GCCGTGTTGC TTAAT GCAACACGAC          TTTTTTTATTACTTA 100 34
APS55_RS01615  299860 ..  299890 - -17.1  -5.04597   ATTTAGACACAAAAA       CACCCCAAAGTTT TGTAC AAACTTTGGGGTG       CAGTGCACCCTTCGG 100 57
APS55_RS01610 NONE
APS55_RS01605  298388 ..  298400 -  -3.5  -3.35255   GTTAATAATAATACA                TATTA ATA TAATA                TTCACTTAAAATTAA  49 104
APS55_RS01600 NONE
APS55_RS01595  295683 ..  295696 -  -5.9  -4.70046   TATAAAACGACAAAA               GACCG CATT CGGCC                TACTTGTTGCGTCTA  75 25
APS55_RS01590  293819 ..  293840 - -11.7  -5.68438   TTAGCAAATAAAAAA           GAGTAACCA CTAT TGGTTACTC            TTTTTGTTTTTGAAT 100 13
APS55_RS01575 NONE
APS55_RS01570 NONE
APS55_RS01565  288667 ..  288684 - -11.3   -5.1104   AAATACATATAAAAA             GGCGATC GTTC GATCGCC              TTTCCTATAGCATTG 100 30
        rsmG NONE
APS55_RS01555 NONE
APS55_RS01550 NONE
APS55_RS01545 NONE
        ychF NONE
APS55_RS01535  284000 ..  284033 -  -8.3  -5.47431   CTAATATACAAAAAA     TGCCAGAGAAAATCA AATT TAATTTTCACTGACA      TTTATTTTTATCTTC  95 33
APS55_RS01530  282773 ..  282792 -  -9.3  -5.67283   AATGTAAATAAAAAA            GGCGCTA TTTTTT TAGCGCC             CTTTAATGTTTTTAA 100 45
APS55_RS01525 NONE
APS55_RS01520 NONE
APS55_RS01515  279404 ..  279424 -  -7.7   -5.7946   TTCGCAATAAAAAAA            GAGTTATCA TTT TAATAACTC            TTTTTTAGAATAAAC 100 30
APS55_RS01510 NONE
APS55_RS01505  278004 ..  278025 - -12.3  -5.52347   AACAAAACTAAAAAA           GCACCGGTC AATT GACCAGTGC            TTTTATTTTTTCTTT 100 43
APS55_RS01485  273035 ..  273055 -  -3.4  -3.71998   GACGGATTAATACAA           GTTTT-GAC ATAG GTCGAAAAC            CCCTTTCTATTTCTT  52 85
APS55_RS01480  272268 ..  272290 - -10.7  -5.54338   TAACTAAAATAAAAA           TCCATACGA ATTAA TCGTATGGA           TTTTTTTATACCCTT 100 87
APS55_RS01455 NONE
APS55_RS01450  266454 ..  266480 - -15.3   -5.4505   CCTCCTAATAAAAAA         GTCCCTGACAA ATAAA TTGTCAGGGAC         GAAATGTTTTTGTTA 100 277
APS55_RS01445  265134 ..  265156 -  -9.3  -5.77856   AATAAATTAAAAAAA           GTAGATTGA ATTAA TCAATCTAC           TTTTAAACGATCATA 100 44
APS55_RS01440  263082 ..  263097 -    -9  -2.92158   TCAAAGAACCAAGTA              GAGAGG TAAA CCTCTC               AAAACTGAATAAGAT  72 77
APS55_RS01435  259953 ..  259963 -  -5.4  -3.61356   ACTATTTATCTGAAA                 GAAC TTC GTTC                 TCTCAAAACTAGATA  59 70
         rrf  259790 ..  259811 -  -9.5  -5.19251   CAATATTAACAAAAA           GCCTTCGAT TTAC ATCGAAGAC            TTTTTTATTCGCGCG 100 36
APS55_RS01425  259585 ..  259622 - -12.2  -6.28401   CAAAAAATAAAAAAA   GCAGCGAAAACAATTG GTATAT CAATCATCTTCGCTGC    TTGAATATAGTCGTT 100 104
APS55_RS01420 NONE
        ppk1  255881 ..  255902 -  -8.8  -5.87996   TAACCAACAAAAAAA           GACCAATC CGTAAC GATTGGTC            TTTTATTTTATTATT 100 69
        trpS NONE
APS55_RS01400  251216 ..  251245 - -10.2   -4.7078   TCAAGCATTTAAAAA       GGTTTTTAACCC GTCAAT GGATTAAAAACC        TCTTTAATAGTTTCG 100 29
APS55_RS01395 NONE
APS55_RS01390 NONE
APS55_RS01385 NONE
APS55_RS01380  247316 ..  247330 -    -5  -3.40498   GAATTGTCAATAATA               TTGCTC TTA GAACAA               ATCTAATTGCATCGG  57 17
        metG  245157 ..  245187 -   -15  -4.62069   CTCCTATCGTAAAAA       TAGCCATCAATTCA TTT TGAATTAATGGCTA       TTTTTTAGTTTGTTA 100 49
APS55_RS01370 NONE
        rnmV NONE
        rsmA  242929 ..  242941 -  -2.7   -2.9961   TCAAATAATATTATA                CCAAT TTT ATTGA                ATGGAATTTATTCGT  42 8
APS55_RS01355  242554 ..  242576 - -12.2  -5.46706   ACCGCAAAATAAAAA           GAGCTAATAA ACA TTATTAGCTC           TTAGTTTTAAGCTTC 100 32
APS55_RS01350  241568 ..  241597 - -10.9   -5.4148   TAAATAATCAAAAAA       TATCCGTTTAAGC TTTC ACCTAAACGGATA        TTTTTAGACAGGTCT 100 29
        purR NONE
        glmU  239202 ..  239231 -  -3.2  -3.47345   AATTTTACACTATAA       TTG-ATAATTTTT CATTC AAAAATTATACAA       ATAATAAATAAAATA  48 56
APS55_RS01335 NONE
APS55_RS01330  237768 ..  237792 - -15.9   -5.4182   AATCATAAACAAAAA          GAACTCACTTC ATT GAAGTGAGTTC          TTTTTTTATAGTGTG 100 31
APS55_RS01315 NONE
APS55_RS01310  234205 ..  234229 -   -13  -5.18355   GGTAAAAATTAAAAA          CTCCCTATTC ATTGA GAATAGGGAG          TCATTGATTACTATA 100 145
APS55_RS01305  232508 ..  232527 -  -8.6   -5.9003   AAATCAACAAAAAAA            GGCC-GGAA AAT TTCCTGGCC            TTTTCTGTAAAACAT 100 42
APS55_RS01300  231101 ..  231116 -    -4  -3.16564   GAAGTTAATTCAACA              CGAAAA TTAA CTTTCG               TCGTTAACTAATTCA  49 16
APS55_RS01295  230725 ..  230747 -   -15  -5.54264   AAATATGTAAAAAAA           GACATATCCG AAA CGGATATGTC           TTTTTTTATCTTTAC 100 37
APS55_RS01285  228641 ..  228668 -  -7.8  -2.97122   AAAAATGTAACTAGA        CTAATATAACCC TTTT GGGTCAAATTAG         CAAATGAATTACCTA  67 43
APS55_RS01280  226953 ..  226980 -  -2.8  -5.81412   TTTATGTAAAAAAAA        GCTATTGACA AATTTTCA TATCAACAGC         TTTTTTGTTATTAAT  81 36
APS55_RS01275  225478 ..  225493 -  -6.2  -2.61264   TCCCCTATCTATAAT              GAATTC ATCT GAATTC               TAAAACGTAATGTGA  57 302
APS55_RS01265  225063 ..  225085 -   -15  -5.65927   TATCGAAACAAAAAA           GGATGCGAAT TAA ATTCGCATCC           TTTTTTTATGTATGT 100 42
APS55_RS01250  222443 ..  222457 -  -2.8   -3.9398   GCAGAACCTGATAAA               CCAGTC ACT AACTGA               CGATGTTTGGGTGCT  52 121
         mfd NONE
APS55_RS01240 NONE
APS55_RS01235  217171 ..  217182 -    -3  -2.77547   ACTAAATTTTAATTA                TTCA GCGT TGAA                 ATCTCTTTCGTATTG  43 11
APS55_RS01230  216683 ..  216700 -  -4.2  -5.94713   ATTGTATAAAAAAAA             TGGTAT TTTTTC ATACCA              TTTTAATTTTGAGTT  89 28
APS55_RS01225  216112 ..  216136 -  -8.7  -5.26119   TTGGTAAAAATAAAA          TGATTAAGGTA ATC TACCCCAATCA          TTTTTTATTTGGTTA 100 38
        tilS NONE
         hpt NONE
        ftsH  211996 ..  212023 -  -9.2  -5.12617   TAATCACCTAAAAAA        GCGTGAGTCAAA TAAA TTCAACCCACGC         TCTATTAGTTAGTCT 100 34
        hslO NONE
        dusB  209978 ..  209992 -  -2.2  -4.56629   CATAATACCATAAAA               CAATTT AAA AAATTA               CATTTCACTTAAATC  58 23
        lysS  208370 ..  208403 - -11.2   -5.7946   CTTTCAACAAAAAAA     GCGCAAAGAATTGA AATTAA TCAATTCTCTACGC      TTAGTTGTAGATCTT 100 39
APS55_RS01190  206400 ..  206411 -    -3  -3.55622   TGTAAGTTTCCGAAA                TTTC CTTA GAAA                 GGAGGTGATCCAGCC  50 23
APS55_RS01185 NONE
APS55_RS01180  206120 ..  206135 -  -7.6  -2.92158   TCAAAGAACCAAGTA              TGACAC TTAC GTGTCA               ATGGAGAATAGCGGG  67 25
APS55_RS01175  202991 ..  203001 -  -5.4  -3.61356   ACTATTTATCTGAAA                 GAAC TTC GTTC                 TCTCAAAACTAGATA  59 70
         rrf NONE
APS55_RS01165  202750 ..  202771 - -13.1  -4.46254   TTAATATACAAGAAA           GGTGCTAAC AAAT GTTAGCACC            TTTTTATATACTCCG 100 34
APS55_RS01160  202610 ..  202645 - -12.9  -4.21275   TTAATCCAGTGAAAA    TAAAAGAACTAGGAC GACTAA ATCCTAGTTCTTTTA     TGCCGGCTGCAGGAC 100 24
APS55_RS01155 NONE
APS55_RS01150 NONE
APS55_RS01145  200529 ..  200551 -  -9.3  -6.12328   ATAACATAAAAAAAA           TGACTAACT ATAAA AGTTAGTCA           TTTAAAGTAGTTGGG 100 33
        proC  199666 ..  199678 -  -3.3   -4.0492   GAATTTGGATATAAA                TTGGC AAA GCCAT                TATTTCACTATCCCT  55 47
APS55_RS01135  198948 ..  198972 -    -8  -5.85244   AAGCAAAATAAAAAA         GTACA-TCGAC ATTA GTCGAATGTAC          TTTTTTTACTATCTA 100 12
APS55_RS01125 NONE
        nadE NONE
APS55_RS01115  195343 ..  195365 - -12.2  -5.71712   TTTTAGATAAAAAAA           TAGTTGGTAA TAT TTACCAACTA           TCTTTTGTTTTTATT 100 39
APS55_RS01110 NONE
APS55_RS01105 NONE
APS55_RS01100  191716 ..  191737 -  -4.5   -5.4505   GGCCGCAATAAAAAA           TCACAAATA TTAT TATATGTGA            TTTTTCCCTACTTTG  81 62
APS55_RS01095 NONE
APS55_RS01090 NONE
APS55_RS01085  191400 ..  191423 - -15.4   -5.4659   GAAGACAAAGAAAAA          GGAGACATCC AAAT GGATGTCTCC           TTTTTAAGTAGTTGG 100 34
APS55_RS01075 NONE
APS55_RS01070  188301 ..  188321 - -12.7  -5.48787   ATAACATACAAAAAA            GAGCTGATA ATT TATCAGCTC            TTTTTATATTGTCTT 100 29
APS55_RS01055 NONE
        radA NONE
APS55_RS01045  182812 ..  182824 -  -3.5  -3.36671   ATTCTAATTTTACAA                TTATT ATC AATAA                AAATAAAGTGCTCAG  49 68
APS55_RS01040  181233 ..  181258 - -11.9  -5.67283   AATTCAAATAAAAAA         GCCCGCCAAAG CATG CTTTAGCGAGC          CTTATTTATTATTGA 100 34
APS55_RS01035 NONE
APS55_RS01030 NONE
        rlmB NONE
APS55_RS01020  177941 ..  177960 -    -3  -2.64218   ACCTCTGATTATAAT            TACATAAA ACAA TTTATATA             GTTACATAATCATAA  42 98
APS55_RS01015 NONE
        rpmG NONE
        secE  176822 ..  176837 -  -3.2  -6.20267   GCAAAAATAAAAAAA              CTCCGC ACTC ACGAAG               TTTCAAACTACCTAT  89 78
        nusG  176173 ..  176188 -    -4  -3.05384   TCTCCTCCCACTTAA              GTATGC GTAA ACATAC               AACAAATAATATATC  49 71
        rplK  175633 ..  175649 -  -6.6  -3.49668   AAACCTCCCACATAA              CACCTA AATAA TAGGTG              TTATGGTACTACAGT  65 59
        rplA  174714 ..  174738 -  -7.2   -5.4833   GGATTTAATAAAAAA          TCCCTATGCC ACCTA GACATAGAGA          AACCGTTTTAAGTGT  90 175
APS55_RS00985 NONE
        rplL  173723 ..  173746 -   -14  -5.65177   ATATGTACAAAAAAA          GAACGTGTGA TAAA TCACACGTTC           TTTTAAAGGGAAATT 100 39
        mprF  170965 ..  171000 - -12.2  -5.50499   TTAGATGCAAAAAAA    TACCCGATACAGA-ATT ATT AATATCTATATCGGGTA    TTTTTATTTACTCAA 100 61
APS55_RS00955 NONE
APS55_RS00950 NONE
         ffs  165929 ..  165953 - -10.8  -4.04353   CATAGATAAAAAAAT          CTCCTAGCCA GCATT TGACTAGGAG          TTTATTTGTATAAAA 100 33
        dnaX NONE
APS55_RS00935 NONE
        recR NONE
APS55_RS00925  162781 ..  162807 -  -7.5  -5.52807   AACAACAAAGAAAAA        GTGTCT-TATTC CAAA GAATAAAGACAC         CTTTAGTAATCAATA  90 28
APS55_RS00920 NONE
APS55_RS00915  161722 ..  161738 -  -2.3  -3.40522   ATTCCCCCATTAGAA              TCGATAA AAA TTATCCA              TTGGCATTTCCATTA  45 3
        holB NONE
APS55_RS00905 NONE
        rsmI NONE
APS55_RS00895  158639 ..  158667 -  -3.9  -4.57921   TATAACAAAAAAATA        GGTGTCTCCAT AATAAAA ATGAACACACC        CGAAAATATTTAATC  64 35
        tsaB NONE
        rimI  157262 ..  157279 -  -7.1  -3.72576   CCTCGTTTCATTAAA             TTCCAAA GTTA TTTGGAA              TAGTTTCGTATAGAC  71 3
        tsaD  156184 ..  156206 - -13.6  -5.80003   TGAATAAACAAAAAA           GATGAATCCA TTT TGGATTCATC           TTTTTTATTCTTCAT 100 30
APS55_RS00870  153404 ..  153422 -  -8.8  -5.94713   ATCCTACAAAAAAAA             GATGGGCC AAT GGCTCATC             TTTCTTATTCACCTT 100 30
       groES  152979 ..  152995 -  -3.7  -3.10164   TTATCTATTATTCAA              CGACA GCTAAAA TGTCG              CTTTCTTTTAGTACT  47 1
        groL  151296 ..  151313 -  -9.9  -5.95539   GGTTAAACAAAAAAA             GGATTCC CAAA GGAATCC              TTTTTTATTACATCA 100 33
APS55_RS00855  150092 ..  150112 - -10.5  -5.38047   GATCCATACAAAAAA            GAATGACCA AGG TGGCCATTC            TTTTTTTAGTGGTTA 100 31
APS55_RS00845  147964 ..  147992 -  -7.3   -2.8806   AAACTGGTTCATACA        GTCCGCACAAACG TAT CGCTTGGGCAGTC        TTTTAAAACTCAATA  63 91
APS55_RS00840 NONE
        secA  144840 ..  144866 - -10.3  -5.14563   CTCCTTACCAAAAAA        GCGAAG-TGAAC TTCT GTTCATCTTCGC         TTTATTATTATCTTT 100 33
        prfB NONE
APS55_RS00825 NONE
APS55_RS00820 NONE
APS55_RS00815  141823 ..  141834 -    -3  -3.29511   TCCACTTCGTTATAA                GATA ATTT TATC                 ATGTTATTAGATGTT  47 53
APS55_RS00810 NONE
APS55_RS00805 NONE
APS55_RS00800 NONE
        galU  137997 ..  138020 -  -5.5  -3.37344   CTTTCATTGAATTAA          TATATGATA CTTTAC TATCATATA           AAACATTTGTCCATT  59 61
        trxB  137012 ..  137031 -   -10  -5.29782   CATAGGCACAAAAAA            GACTGGCC ATTT GACCAGTC             TTTTTAATCATACTT 100 42
        uvrB NONE
        uvrA  131995 ..  132008 -  -8.1  -5.67283   AAGGCAAATAAAAAA               GCGTG TCAT CACGC                TTTTTTTATTTTCTT 100 31
APS55_RS00775 NONE
        whiA  129936 ..  129957 - -11.7  -5.60689   TTAGATAATAAAAAA           GACGTTAAC TTTG GTTAACGTC            TTTTTTTGTGCCCTT 100 41
         gap  127836 ..  127859 - -16.8  -5.25803   AATTGTTATAAAAAA          TGGAGGAGGC AATT GCCTCCTCCA           CCTTATGCCTTGCTA 100 55
APS55_RS00750  126471 ..  126493 -  -9.2   -6.0427   ATTATACAAAAAAAA           GACCCGATGT TAT ACATCGAATC           TTAAAAAGATATTAT 100 43
APS55_RS00745 NONE
         eno  124116 ..  124135 -  -9.4  -5.64274   TTATGTACAAAAAAA            GCATTGAA ATAA TTCAATGC             TTTTTTTAGTAACAG 100 48
APS55_RS00735 NONE
        secG  122157 ..  122179 -  -9.2  -5.71712   TTTCACATAAAAAAA           GCTCCTGTAA AAA TTACAGGAGT           CTTATCAACTAGTGT 100 34
         rnr NONE
        smpB  119169 ..  119187 - -10.2  -5.45726   CACATCGCAAAAAAA             GCGCCCCA TCA CGGGACGC             TTTTTTAGTAGTGTT 100 30
APS55_RS00715 NONE
         pta NONE
        tsaE NONE
APS55_RS00700  116425 ..  116446 -  -7.3  -5.54192   ATCAAGGTAAAAAAA           TAAGCATCC AGCT GGGTGCTTA            TTTTTTTAGGTTATA  90 23
        murB NONE
APS55_RS00685  112845 ..  112864 -  -9.3  -5.31545   AAGAATAGTAAAAAA            GACAGCC TTTATC GGCTGTC             TTTTTTTAGTCTGTG 100 31
APS55_RS00675 NONE
APS55_RS00670 NONE
APS55_RS00665  108796 ..  108813 -  -8.5  -5.83226   AAGGCAATAAAAAAA             GCAATCT AATT AGATTGC              TTTTAATTTTTTATT 100 36
        glmS  106665 ..  106681 -  -8.7  -5.68438   TCATCAAATAAAAAA              GAGTACC CAA GGCACTC              TTTTGATTATTAAAT 100 40
APS55_RS00655 NONE
APS55_RS00650  103564 ..  103582 -  -5.3  -5.75342   CCCTCGCAAAAAAAA             TCCGTTC AAAGA AAACGGA             TTTTTTGATTATTTA  91 34
APS55_RS00645  103179 ..  103206 - -11.4  -4.53765   ACACATATTATAAAA        GGAAGTCATCAA CCTA CCGATGACTTCC         TTTTTTATTATCCAA 100 33
APS55_RS00635  101335 ..  101357 -   -15  -5.58522   CATATAAAATAAAAA           GGACTTACCA AAT TGGTAAGTCC           TTTTTTTACGCTTAA 100 37
APS55_RS00625   97962 ..   97977 -  -2.6  -3.16202   TGTACATTAAAATCA              TTCCTT TCCA AAAGAA               TTCATTATTTTAATT  43 76
APS55_RS00620   97130 ..   97152 - -11.4  -5.69379   ATAGAAGTAAAAAAA           GATGGTATCA AAT CGATACCATC           TTTTTTTGTGGAATT 100 41
APS55_RS00610   94687 ..   94710 -  -4.6  -5.33026   TAATTCAAACAAAAA          GCCAACTATG AAAA CATAATCAGC           TTTGTGATTTTATAA  77 35
APS55_RS00605   93569 ..   93597 - -13.3  -4.75309   TTAAATCCAATAAAA        GAAGACCTACCAA TAA TTGGTAGGTCTTT        TTTGTATGTTTAATT 100 39
APS55_RS00595   92506 ..   92536 - -17.1  -5.04597   ATTTAGACACAAAAA       CACCCCAAAGTTT TGTAC AAACTTTGGGGTG       CAGTGCAGCAGATTA 100 38
APS55_RS00590 NONE
APS55_RS00585   90730 ..   90751 -  -3.7  -3.75105   TGAATGGAGCAACAA           GATCAAATC ATTG GATGCGATC            GTATTACTATTTCCT  55 399
APS55_RS00570   88234 ..   88253 -   -10  -4.98522   AACTCTACATAAAAA            GTGCGGCT CAAT AACCGCAC             TTTTTTATTTTAGTG 100 30
APS55_RS00565   86972 ..   86986 -  -7.8  -6.04419   AAAACAATAAAAAAA               CGCCCA TAT TAGGCG               TCTTTCTACTTAACA 100 31
APS55_RS00560   85569 ..   85590 -  -8.8  -5.68039   AAATGTACAAAAAAA           GACATCGT ATTCAA ACGATGTC            TTTTCATTTATTAAA 100 36
APS55_RS00555   84315 ..   84359 - -11.7  -5.54907   CGTATAAAACAAAAA CTGGGAGGAATGTCA-CCGGT TGAAT ACCGGATCA-ATTCCTCCCAG AAAATAGCATAACCA 100 80
APS55_RS00535   79519 ..   79533 -  -7.2  -3.53444   GGAGGTGTTGCTAAA               TTGGAT AGT ATCCAA               CATCATTTGAGCCAA  68 6
APS55_RS00530 NONE
APS55_RS00525   78102 ..   78132 -  -4.3  -5.64421   ATGGCAAATAAAAAA      TAACTAAATAC-AT CAAT ATAGTATCTAGTTA       TCATCATTCACTATT  82 493
APS55_RS00515   75504 ..   75524 - -11.2  -5.50774   GATAATAAAGAAAAA            GACAGCCA AATAA TGGCTGTC            TTTTTTGTTTGCTAG 100 37
APS55_RS00505   75165 ..   75189 -  -6.4  -5.82172   ATGAATACAAAAAAA          CGCCATCACC CGCAT AGTGACAGCG          TTATGCCCAGTTATA  95 61
APS55_RS00490   72929 ..   72947 -    -6  -5.86976   TGACAAAATAAAAAA             GAGCAGAT AAA ATTTGCTC             TTTTTTTATACCGTC  93 51
APS55_RS00485   71668 ..   71688 -  -9.8  -4.74132   ATATCTTAGTAAAAA            GGAACAGT TAAAT ACTGTTCC            TTTTTTAAATAAACA 100 30
APS55_RS00460   69170 ..   69186 -  -3.7  -5.29846   AATTGTAAATAAAAA              GTCACTC AAA GAATAAC              TTTTGAACAGTCATG  73 10
APS55_RS00450 NONE
APS55_RS00445   67771 ..   67790 -  -3.5   -4.3129   TATTCAGTATCAAAA            GCTAGTC ATCATA GACTGGC             GTTAATCGAACCCTA  60 7
APS55_RS07930 NONE
APS55_RS00435 NONE
APS55_RS07925 NONE
APS55_RS00425   65958 ..   65970 -  -4.9  -3.21705   TAGAATTGAAGTTAA                TCAAA GCA TTTGA                TGTTATTGCAAATCG  53 60
APS55_RS00420 NONE
APS55_RS00415 NONE
         ssb   63829 ..   63839 -  -5.4  -3.15276   AAATTAAAATAATGA                 TGCT GAT AGCA                 ATACTTATCATTCTT  54 49
APS55_RS00405 NONE
APS55_RS00400 NONE
APS55_RS00395 NONE
APS55_RS00390 NONE
APS55_RS00380 NONE
APS55_RS00375 NONE
APS55_RS00370 NONE
APS55_RS00365 NONE
APS55_RS00360   59151 ..   59177 -  -8.8  -4.72272   TTGTGGTAGCAAAAA         CTAATAACGGAT TCG AACCGCTATTAG         CAAATGATTTTAAAG  91 167
APS55_RS00355   58594 ..   58610 -  -8.1  -2.52896   TTATCTGGTAACTCA              TGCATTA ACT TAATGCA              GTCACCTTTTTGTAA  68 102
APS55_RS00350   57900 ..   57915 -  -2.5  -2.82145   AAGCATTAAAAAAGG              CAGCC ATTATA GACTG               TCTAGTTCATTGTTA  41 16
APS55_RS00345 NONE
APS55_RS07920   57580 ..   57594 -  -4.2  -3.06183   TCTAGTCTTATGTAA               CGTTAC ATT GTTACG               TGTTACATTATTCAG  49 33
APS55_RS00335   56618 ..   56632 -  -2.1  -2.94232   GTTCTTGTAAACAAT               GCGAT AATCA ATCAC               TCCTTATTAGGTAAT  41 102
APS55_RS00330   56132 ..   56177 - -12.2  -4.10453   TAAATTTGTGCAAAA TAAAAACGTTACAACCATTG ATATAA CAACGATTGTAACGCCTTTA TTTTGTCTACTTTAC 100 192
APS55_RS00325 NONE
APS55_RS00320 NONE
APS55_RS00315   51709 ..   51728 -  -7.2  -5.50723   TGAGCAAAATAAAAA            GCCTTAAC GAGT GTTAAGAC             TTAACTTGATACTTT  90 26
APS55_RS00310   50967 ..   50981 -  -2.8  -2.73903   AAAATGTCTCTAAAT               TGCATA ATA TATGCC               TCCTAATTATTTAAT  41 32
APS55_RS00305   50429 ..   50451 -  -5.6  -3.86252   CTTTACCAAATACAA           CGTTAACAGC AGT ACCGTTAACA           ACTTCATCTTCTAGA  64 150
APS55_RS00295 NONE
APS55_RS00290 NONE
APS55_RS00285 NONE
APS55_RS00280 NONE
APS55_RS00275 NONE
APS55_RS00270 NONE
APS55_RS00265   45808 ..   45823 -  -3.2  -2.95787   TAGTTAAGATTAAAC              TGCTGA AGCA TCTGCA               TTAATACATTTAAAT  44 4
APS55_RS00260 NONE
APS55_RS07865   44925 ..   44942 -  -2.8  -3.05775   ATGATTTGGTAAAAC             TATCAA GTTGTT TTGATA              AACCATTAATTGTCT  43 159
APS55_RS07860   40911 ..   40930 -  -8.6  -4.79352   TTATGTACAAGAAAA            GAGCTAGC ATAA ACTAGCTC             TTTTACTATATTTTT  91 31
APS55_RS00250 NONE
APS55_RS00245 NONE
APS55_RS00240 NONE
APS55_RS00235 NONE
APS55_RS00230 NONE
APS55_RS00225 NONE
APS55_RS00220 NONE
APS55_RS00215 NONE
APS55_RS00210 NONE
APS55_RS00205   33882 ..   33909 -  -9.3  -4.77165   TTGTGCATAATAAAA        GCACCTAACTA AATTAA TAATTAGGTGC         TACATTTGTGTATCT 100 25
APS55_RS00200 NONE
APS55_RS00195 NONE
APS55_RS00190 NONE
APS55_RS00185   31593 ..   31619 -   -16  -5.46129   GAATAAACTAAAAAA         GCCTAGCAATCA AAA TGACTGCTAGGC         TTTTTATTATTCAAC 100 32
APS55_RS00175   30480 ..   30497 -  -7.7  -5.63517   TTTGTAAATAAAAAA             CGCCACT ATCA AGTGACG              TCTGTGTACTAAATG  95 34
APS55_RS00150 NONE
APS55_RS00145 NONE
APS55_RS00140   23571 ..   23593 - -12.1  -5.48514   ATTAATAAACAAAAA           GACGGATAC ATTAA GTATCCGTC           TTTTTTTATTTGTTT 100 31
APS55_RS00125 NONE
        prfA NONE
        prmC NONE
APS55_RS00110 NONE
APS55_RS00105 NONE
         upp   15835 ..   15856 -  -6.6  -6.08342   GAATAAATAAAAAAA           TCCATCGC AAAAAG ACGATGGA            TTTTTATTTATTTAG  95 33
        atpB NONE
        atpE NONE
        atpF NONE
APS55_RS00080 NONE
APS55_RS00075 NONE
APS55_RS00070 NONE
        atpD NONE
APS55_RS00060    9140 ..    9162 - -12.1  -5.64274   TTATGTATAAAAAAA           GGTCTGCAT AAAAA ATGCAGACC           TCTTTCTTAATGTTT 100 32
APS55_RS07850 NONE
        murA NONE
APS55_RS00045 NONE
        yidD    6095 ..    6133 -  -9.9  -4.56597   TTGTCCTCCTAAAAA  TAAAAGTAGTCGATTCAA ATAT TTGA-TCGACTACTTTAA   ATTCATAGAACGTCG 100 17
APS55_RS00040 NONE
APS55_RS00035    4414 ..    4426 -  -2.7  -3.33583   ACAATAGCCTCATAA                GTATC TTT AATAC                TTCAGCAATATAACG  45 228
APS55_RS00030 NONE
APS55_RS00025 NONE
APS55_RS00020    1705 ..    1737 - -13.7  -3.52177   TCTTAAAAAAGTCAA      TAAAAAAAAAGCGTC TCA GACGCTTTTTTATTA      ATAGTTCTTAGCTGG   0 23
